Nematolebias whitei isolate Nwh7 chromosome 24, NemWhi1, whole genome shotgun sequence.
type: Entry
definition: Nematolebias whitei isolate Nwh7 chromosome 24, NemWhi1, whole genome shotgun sequence.
sequence version: NC_056521.1
sequence date: 2021-07-29
sequence: sequence
division: CON
label: NC_056521.1
type: RefSeq
SIO_000068: refseq
dblink: PRJNA678356
dblink: SAMN12588121
keyword: WGS
keyword: RefSeq
source: Nematolebias whitei (Rio pearlfish)
organism: Nematolebias whitei
taxonomy: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Atherinomorphae; Cyprinodontiformes; Rivulidae; Nematolebias.
comment: REFSEQ INFORMATION: The reference sequence is identical to\nCM029756.1.\nAssembly name: NemWhi1\nThe genomic sequence for this RefSeq record is from the\nwhole-genome assembly released by the Michigan State University on\n2020/10/22. The original whole-genome shotgun project has the\naccession JAAMPK000000000.1.\n\n##Genome-Assembly-Data-START##\nAssembly Provider :: Michigan State University\nAssembly Method :: SuperNova, Chicago, HiC v. April 2020\nAssembly Name :: NemWhi1\nGenome Representation :: Full\nExpected Final Version :: Yes\nGenome Coverage :: 53.63x\nSequencing Technology :: Illumina\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI\nAnnotation Status :: Updated annotation\nAnnotation Name :: Nematolebias whitei Updated\n Annotation Release 100.20210725\nAnnotation Version :: 100.20210725\nAnnotation Pipeline :: NCBI eukaryotic genome annotation\n pipeline\nAnnotation Software Version :: 9.0\nAnnotation Method :: Best-placed RefSeq; propagated\n RefSeq model\nFeatures Annotated :: Gene; mRNA; CDS; ncRNA\n##Genome-Annotation-Data-END##

sequence
subclass of: SO_0000340
sequence length: 2648531
topology: linear
so has quality: SO_0000987
location: 1..2648531
location: region:1-2648531:1
RO_0002162: 451745

NC_056521
type: RefSeq
SIO_000068: refseq

PRJNA678356
type: BioProject
SIO_000068: bioproject

SAMN12588121
type: BioSample
SIO_000068: biosample

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2648531:1
position: 2648531
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-2648531:1:source
so part of: sequence
organism: Nematolebias whitei
mol type: genomic DNA
isolate: Nwh7
chromosome: 24
sex: female
tissue type: liver
dev stage: adult
country: Brazil: Barra de Sao Joao

451745
type: Taxonomy
SIO_000068: taxonomy

LOC119429173
type: Gene
subclass of: SO_0000704
RO_0002162: 451745
gene: LOC119429173
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 31795..47153
location: region:31795-47153:1
so has part: feature:31795-47153:1:exon
subclass of: SO_0000010

119429173
type: Gene
SIO_000068: ncbigene

position:31795:1
position: 31795
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:47153:1
position: 47153
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:31795-47153:1:exon

LOC119429173
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 451745
gene: LOC119429173
product: oocyte zinc finger protein XlCOF19-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 42% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_037696853.1
SIO_010081: LOC119429173
subclass of: SO_0000673
so part of: LOC119429173
location: join(31795..32147,32436..32601,33109..33240,46854..47153)
location: region:31795-47153:1
so has part: feature:31795-32147:1:exon
so has part: feature:32436-32601:1:exon
so has part: feature:33109-33240:1:exon
so has part: feature:46854-47153:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:31795-32147:1:exon

position:32147:1
position: 32147
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:32436-32601:1:exon

position:32436:1
position: 32436
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:32601:1
position: 32601
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:33109-33240:1:exon

position:33109:1
position: 33109
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:33240:1
position: 33240
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:46854-47153:1:exon

position:46854:1
position: 46854
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC119429173
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 451745
gene: LOC119429173
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: oocyte zinc finger protein XlCOF19-like
translation: MRVHTGHKPFPCELCGQRFSVNSNLNRHMRVHTGDKPFPCDFCGQRFSHKMHLKSHMRVHTGEKPFLCEICGQRFRQKTNLNTHMRVHTGDKPFPCELCGQRFSQMATLNSHMRVHTGFRQMATLNSHMRVHTGDKPYLCELCGQRFGHKTNLTIHMRVHTGDKPFPCEICGQFGHKTHLNRHMRVHTGDKPFPCDLCGQRFSRKTHLISHMRVHTGREKTLRGSSSGITKIVWSRNFLRYHVLVSKYGQLASLAEVELTPLSTVMEVRWGDQVQPVSFRLEQTVVYLKKQLLALLQLPTNGVRLFHIDKEMCLVL
SIO_010081: LOC119429173
subclass of: SO_0000673
so part of: LOC119429173
location: join(31795..32147,32436..32601,33109..33240,46854..47153)
location: region:31795-47153:1
so has part: feature:31795-32147:1:exon
so has part: feature:32436-32601:1:exon
so has part: feature:33109-33240:1:exon
so has part: feature:46854-47153:1:exon

XP_037552781.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:31795-32147:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:32436-32601:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:33109-33240:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:46854-47153:1:exon

LOC119429174
type: Gene
subclass of: SO_0000704
RO_0002162: 451745
gene: LOC119429174
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 90864..139103
location: region:90864-139103:1
so has part: feature:90864-139103:1:exon
subclass of: SO_0000010

119429174
type: Gene
SIO_000068: ncbigene

position:90864:1
position: 90864
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:139103:1
position: 139103
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:90864-139103:1:exon

LOC119429174
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 451745
gene: LOC119429174
product: NLR family CARD domain-containing protein 3-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 23 Proteins, and 13% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_037696854.1
SIO_010081: LOC119429174
subclass of: SO_0000673
so part of: LOC119429174
location: join(90864..91090,91391..91590,104540..106328,106430..106603,110780..110873,120691..120713,122936..123109,126365..126411,138556..139103)
location: region:90864-139103:1
so has part: feature:90864-91090:1:exon
so has part: feature:91391-91590:1:exon
so has part: feature:104540-106328:1:exon
so has part: feature:106430-106603:1:exon
so has part: feature:110780-110873:1:exon
so has part: feature:120691-120713:1:exon
so has part: feature:122936-123109:1:exon
so has part: feature:126365-126411:1:exon
so has part: feature:138556-139103:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:90864-91090:1:exon

position:91090:1
position: 91090
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:91391-91590:1:exon

position:91391:1
position: 91391
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:91590:1
position: 91590
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:104540-106328:1:exon

position:104540:1
position: 104540
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:106328:1
position: 106328
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:106430-106603:1:exon

position:106430:1
position: 106430
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:106603:1
position: 106603
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:110780-110873:1:exon

position:110780:1
position: 110780
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:110873:1
position: 110873
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:120691-120713:1:exon

position:120691:1
position: 120691
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:120713:1
position: 120713
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:122936-123109:1:exon

position:122936:1
position: 122936
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:123109:1
position: 123109
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:126365-126411:1:exon

position:126365:1
position: 126365
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:126411:1
position: 126411
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:138556-139103:1:exon

position:138556:1
position: 138556
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC119429174
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 451745
gene: LOC119429174
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: NLR family CARD domain-containing protein 3-like
translation: MLPVLPEERGESLLEKRYLCSSEEQFSSPLLDELELWKTSMVQRYLDPPAEQSSTRSLEERGEIPLRKRFPDSPVGSPAAAPVPDSSAAAPMPYSTAENPELTAEDSGSAEVLAPGSSAEVLAPGSSAEVLAPGPPKEVLAPESHIPCWGKLKLMLQKKYQYVSEGISNTENPTPLNQIYANLYIIEGGTGEDNCEHEVRQIENASRMPDRLERTITHEDILKPPPGRHEPVRTVMTLGVAGIGKTVLTQKFTLDWAEDNANKDIHFMFPFTFRELNVLKEKKFSLMKLVHHFFTETKEMCNFEDFQLVFIFDGLDECRLPLDFHNNQILTDVTESTSMDVLLTNLIRGKLLPSARLWITTRPAAANQIPAECVDMVTEVRGFNDPQKEEYFRKRFKDEEQASRIISHIKTSRSLHIMCRIPIFCWITATVLEDLLKINNVSEMPKTLTEMYIYFLVVQAKVKKVKYDGGAETDPHWSPESRKMIESLGKLAFEQLQKGNLIFYESDLTECGMDVKKASVYSGVLTQFFLEEIGLYQEKLFCFIHLSVQEFLAALHVHLTFINSGINLFKKKKRWLLEIFSKFQKVKPFYLCAVDKALQSPNGHLDLFLRFLLGLSLQTNQKFLQGLLTQTGSSSQTNQETGQYIKNLISENLSAEKSINLFHCLNELNDGSLVEEIQHSLSSGNLSTDKLSPAQWSALVFILLSSGNELDVFDLKKYSASEEVLLRLLPVVKASSKAMLSGCNLSEGSCEVLPSLLGSQCCSLRELDLSNNNLKDSGVKFLSVGLKSLNCKLETLRTCSIQQAVEAGSEVHLKKHHPYSAQVHHQATAKLEFMLRLSGCLITEEGCASLASALSSNPSHLRELDLSYNHPGDSGVKLLSDGRKDPQWRLDTLRVEPAGVRWLTPGLRKYSCQLMLDTNTISRNLQVSHSNRKVMHVEEEQSYPDHPDRFEGYCPQLMCKDALTARCFWEVEWQGEVDIAVCYRKIKRGGERAVCEFGRNLESWSLSCSGRGHYTAWHNEKGTSIFSSSSISDRVAVFVDFPAGILSFYKVLSDTLIHIHTFNTTFTEPLYPGFSFGFWNRTGSTIRLISL
SIO_010081: LOC119429174
subclass of: SO_0000673
so part of: LOC119429174
location: join(90864..91090,91391..91590,104540..106328,106430..106603,110780..110873,120691..120713,122936..123109,126365..126411,138556..139103)
location: region:90864-139103:1
so has part: feature:90864-91090:1:exon
so has part: feature:91391-91590:1:exon
so has part: feature:104540-106328:1:exon
so has part: feature:106430-106603:1:exon
so has part: feature:110780-110873:1:exon
so has part: feature:120691-120713:1:exon
so has part: feature:122936-123109:1:exon
so has part: feature:126365-126411:1:exon
so has part: feature:138556-139103:1:exon

XP_037552782.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:90864-91090:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:91391-91590:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:104540-106328:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:106430-106603:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:110780-110873:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:120691-120713:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:122936-123109:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:126365-126411:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:138556-139103:1:exon

LOC119429151
type: Gene
subclass of: SO_0000704
RO_0002162: 451745
gene: LOC119429151
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: 148127..149750
location: region:148127-149750:1
so has part: feature:148127-149750:1:exon

119429151
type: Gene
SIO_000068: ncbigene

position:148127:1
position: 148127
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:149750:1
position: 149750
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:148127-149750:1:exon

LOC119429151
type: Exon
subclass of: SO_0000147
RO_0002162: 451745
gene: LOC119429151
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 30 Proteins, and 55% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC119429151
subclass of: SO_0000673
so part of: LOC119429151
location: 148127..149750
location: region:148127-149750:1
so has part: feature:148127-149750:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:148127-149750:1:exon

LOC119429176
type: Gene
subclass of: SO_0000704
RO_0002162: 451745
gene: LOC119429176
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 156413..158582
location: region:156413-158582:1
so has part: feature:156413-158582:1:exon
subclass of: SO_0000010

119429176
type: Gene
SIO_000068: ncbigene

position:156413:1
position: 156413
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:158582:1
position: 158582
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:156413-158582:1:exon

LOC119429176
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 451745
gene: LOC119429176
product: endothelin-2-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins
transcript id: XM_037696855.1
SIO_010081: LOC119429176
subclass of: SO_0000673
so part of: LOC119429176
location: join(156413..156461,156750..156903,157028..157141,158161..158238,158338..158418,158501..158582)
location: region:156413-158582:1
so has part: feature:156413-156461:1:exon
so has part: feature:156750-156903:1:exon
so has part: feature:157028-157141:1:exon
so has part: feature:158161-158238:1:exon
so has part: feature:158338-158418:1:exon
so has part: feature:158501-158582:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:156413-156461:1:exon

position:156461:1
position: 156461
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:156750-156903:1:exon

position:156750:1
position: 156750
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:156903:1
position: 156903
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:157028-157141:1:exon

position:157028:1
position: 157028
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:157141:1
position: 157141
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:158161-158238:1:exon

position:158161:1
position: 158161
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:158238:1
position: 158238
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:158338-158418:1:exon

position:158338:1
position: 158338
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:158418:1
position: 158418
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:158501-158582:1:exon

position:158501:1
position: 158501
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC119429176
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 451745
gene: LOC119429176
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: endothelin-2-like
translation: MSKILHLFISCMVLQEGCGLSLSDHTEAPVPVPHPKHIRTKRCSCNTWDDKECIYFCHLDIIWVNTPSNLLPYGLGSLVSRRRRSADRCKCNNPTDITCHGFCHKSSEDRRTNDSSPPTTPTHSNKLLASLRSAARSNMSITSKMTSFDVEKSRNRTRSTTISEEAGVKTWKATGDQWDLLMNTC
SIO_010081: LOC119429176
subclass of: SO_0000673
so part of: LOC119429176
location: join(156413..156461,156750..156903,157028..157141,158161..158238,158338..158418,158501..158582)
location: region:156413-158582:1
so has part: feature:156413-156461:1:exon
so has part: feature:156750-156903:1:exon
so has part: feature:157028-157141:1:exon
so has part: feature:158161-158238:1:exon
so has part: feature:158338-158418:1:exon
so has part: feature:158501-158582:1:exon

XP_037552783.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:156413-156461:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:156750-156903:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:157028-157141:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:158161-158238:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:158338-158418:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:158501-158582:1:exon

LOC119429155
type: Gene
subclass of: SO_0000704
RO_0002162: 451745
gene: LOC119429155
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 197516..202965
location: region:197516-202965:1
so has part: feature:197516-202965:1:exon
subclass of: SO_0000010

119429155
type: Gene
SIO_000068: ncbigene

position:197516:1
position: 197516
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:202965:1
position: 202965
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:197516-202965:1:exon

LOC119429155
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 451745
gene: LOC119429155
product: DDRGK domain-containing protein 1
inference: similar to RNA sequence (same species):INSD:GELZ01022958.1
exception: annotated by transcript or proteomic data
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: added 144 bases not found in genome assembly; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins, and 96% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_037696834.1
SIO_010081: LOC119429155
subclass of: SO_0000673
so part of: LOC119429155
location: join(197516..>197699,<200254..200372,200570..200671,200753..200875,202027..202065,202360..202465,202690..202965)
location: region:197516-202965:1
so has part: feature:197516-197699:1:exon
so has part: feature:200254-200372:1:exon
so has part: feature:200570-200671:1:exon
so has part: feature:200753-200875:1:exon
so has part: feature:202027-202065:1:exon
so has part: feature:202360-202465:1:exon
so has part: feature:202690-202965:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:197516-197699:1:exon

position:197699:1
position: 197699
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 2
SIO_000628: feature:200254-200372:1:exon

position:200254:1
position: 200254
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

position:200372:1
position: 200372
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:200570-200671:1:exon

position:200570:1
position: 200570
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:200671:1
position: 200671
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:200753-200875:1:exon

position:200753:1
position: 200753
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:200875:1
position: 200875
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:202027-202065:1:exon

position:202027:1
position: 202027
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:202065:1
position: 202065
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:202360-202465:1:exon

position:202360:1
position: 202360
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:202465:1
position: 202465
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:202690-202965:1:exon

position:202690:1
position: 202690
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC119429155
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 451745
gene: LOC119429155
inference: similar to RNA sequence (same species):INSD:GELZ01022958.1
exception: annotated by transcript or proteomic data
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: added 144 bases not found in genome assembly; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: DDRGK domain-containing protein 1
translation: MDVLVYLAAALVLLLLILFALKLQRKTRDADEEQQRDVVRAAGAPLRAPEDRGAGMPRRRRNLATVMANRRLQRGGPDEEEPVEDEEEEQNLQPAARVGAKKQKKLEEKQAKKAQREAEMEEREERRRMQELREQERRKEEDRERLLEKKQEEEEEQAKVEQERREEEEYLRLKASFVIEEQGEQEQLSEDQSRSLLQDFIQYIESSKVVLLEDLASHFGMRTQDAISRLQDLLAEGTLTGVIDDRGKFIFITPEELDSVARFIKQRGRVSITELAQASNSLINLVPESRSAA
SIO_010081: LOC119429155
subclass of: SO_0000673
so part of: LOC119429155
location: join(197612..>197699,<200254..200372,200570..200671,200753..200875,202027..202065,202360..202465,202690..202850)
location: region:197612-202850:1
so has part: feature:197612-197699:1:exon
so has part: feature:200254-200372:1:exon
so has part: feature:200570-200671:1:exon
so has part: feature:200753-200875:1:exon
so has part: feature:202027-202065:1:exon
so has part: feature:202360-202465:1:exon
so has part: feature:202690-202850:1:exon

XP_037552762.1
type: Protein
SIO_000068: ncbiprotein

position:197612:1
position: 197612
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:202850:1
position: 202850
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:197612-197699:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:200254-200372:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:200570-200671:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:200753-200875:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:202027-202065:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:202360-202465:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:202690-202850:1:exon

ddx4
type: Gene
subclass of: SO_0000704
RO_0002162: 451745
gene: ddx4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(212953..237243)
location: region:212953-237243:-1
so has part: feature:212953-237243:-1:exon
subclass of: SO_0000010

119429159
type: Gene
SIO_000068: ncbigene

position:212953:-1
position: 212953
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:237243:-1
position: 237243
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:212953-237243:-1:exon

ddx4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 451745
gene: ddx4
product: DEAD (Asp-Glu-Ala-Asp) box polypeptide 4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 124 Proteins, and 96% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_037696837.1
SIO_010081: ddx4
subclass of: SO_0000673
so part of: ddx4
location: complement(join(212953..213184,214564..214671,215275..215545,215624..215723,215804..215949,216022..216188,217797..217926,218006..218160,219651..219803,219878..220020,221607..221642,221714..221755,221832..221864,221945..221992,222067..222093,222176..222220,226420..226491,230820..230859,230925..230957,237123..237243))
location: region:212953-237243:-1
so has part: feature:237123-237243:-1:exon
so has part: feature:230925-230957:-1:exon
so has part: feature:230820-230859:-1:exon
so has part: feature:226420-226491:-1:exon
so has part: feature:222176-222220:-1:exon
so has part: feature:222067-222093:-1:exon
so has part: feature:221945-221992:-1:exon
so has part: feature:221832-221864:-1:exon
so has part: feature:221714-221755:-1:exon
so has part: feature:221607-221642:-1:exon
so has part: feature:219878-220020:-1:exon
so has part: feature:219651-219803:-1:exon
so has part: feature:218006-218160:-1:exon
so has part: feature:217797-217926:-1:exon
so has part: feature:216022-216188:-1:exon
so has part: feature:215804-215949:-1:exon
so has part: feature:215624-215723:-1:exon
so has part: feature:215275-215545:-1:exon
so has part: feature:214564-214671:-1:exon
so has part: feature:212953-213184:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:237123-237243:-1:exon

position:237123:-1
position: 237123
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:230925-230957:-1:exon

position:230925:-1
position: 230925
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:230957:-1
position: 230957
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:230820-230859:-1:exon

position:230820:-1
position: 230820
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:230859:-1
position: 230859
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:226420-226491:-1:exon

position:226420:-1
position: 226420
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:226491:-1
position: 226491
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:222176-222220:-1:exon

position:222176:-1
position: 222176
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:222220:-1
position: 222220
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:222067-222093:-1:exon

position:222067:-1
position: 222067
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:222093:-1
position: 222093
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:221945-221992:-1:exon

position:221945:-1
position: 221945
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:221992:-1
position: 221992
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:221832-221864:-1:exon

position:221832:-1
position: 221832
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:221864:-1
position: 221864
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:221714-221755:-1:exon

position:221714:-1
position: 221714
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:221755:-1
position: 221755
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:221607-221642:-1:exon

position:221607:-1
position: 221607
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:221642:-1
position: 221642
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:219878-220020:-1:exon

position:219878:-1
position: 219878
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:220020:-1
position: 220020
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:219651-219803:-1:exon

position:219651:-1
position: 219651
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:219803:-1
position: 219803
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:218006-218160:-1:exon

position:218006:-1
position: 218006
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:218160:-1
position: 218160
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:217797-217926:-1:exon

position:217797:-1
position: 217797
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:217926:-1
position: 217926
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:216022-216188:-1:exon

position:216022:-1
position: 216022
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:216188:-1
position: 216188
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:215804-215949:-1:exon

position:215804:-1
position: 215804
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:215949:-1
position: 215949
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:215624-215723:-1:exon

position:215624:-1
position: 215624
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:215723:-1
position: 215723
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:215275-215545:-1:exon

position:215275:-1
position: 215275
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:215545:-1
position: 215545
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:214564-214671:-1:exon

position:214564:-1
position: 214564
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:214671:-1
position: 214671
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:212953-213184:-1:exon

position:213184:-1
position: 213184
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

ddx4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 451745
gene: ddx4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: probable ATP-dependent RNA helicase DDX4
translation: MDDWEEEETPRTFSSYTPHGVFAGGDGGDGGDAARGDRGGFRGRGRSRGFGRTEQSHFSANGHGDHENGFRGRRGGSRGGRFRKEDQGGHEDLRGGYRGRDEEIFPARSGEDKDPENEDADRPRVTYVPPTLPEDEESIFSHYETGINFNKYDEILVDVSGTNPPQAIMTFDEAGLCKSLVTNVSKSGYVKPTPVQKHGIPIISAGRDLMACAQTGSGKTAAFLLPILQQLMADGVAASRFSEIQEPEAIIVAPTRELINQIFLEARKFAFGTCVRPVVVYGGVSTGHQIRDLTRGCNMLCGTPGRLLDVIGRGKVGLSKVRYLVLDEADRMLDMGFEPVMRRLVGSPGMPSKESRQTLMFSATYPEDIQRLAADFLKADYLFLAVGIVGGACSDVEQKFVQVTKFDKREQLLDILRTTGSERTMVFVETKRLADFIAAFLCQEKLPTTSIHGDREQREREQALADFRSGKCPVLVATSVAARGLDIPDVQHVVNFDLPKDIDEYVHRIGRTGRCGNTGRAVSFFDPDVDGQLARSLVTILSKAQQEVPSWLEESAFSGSGGSAFNPCRKPFVSTDSRKRGSFQDSSVQNQPAVQTAAAEEEDEWE
SIO_010081: ddx4
subclass of: SO_0000673
so part of: ddx4
location: complement(join(213101..213184,214564..214671,215275..215545,215624..215723,215804..215949,216022..216188,217797..217926,218006..218160,219651..219803,219878..220020,221607..221642,221714..221755,221832..221864,221945..221992,222067..222093,222176..222220,226420..226491,230820..230859,230925..230945))
location: region:213101-230945:-1
so has part: feature:230925-230945:-1:exon
so has part: feature:230820-230859:-1:exon
so has part: feature:226420-226491:-1:exon
so has part: feature:222176-222220:-1:exon
so has part: feature:222067-222093:-1:exon
so has part: feature:221945-221992:-1:exon
so has part: feature:221832-221864:-1:exon
so has part: feature:221714-221755:-1:exon
so has part: feature:221607-221642:-1:exon
so has part: feature:219878-220020:-1:exon
so has part: feature:219651-219803:-1:exon
so has part: feature:218006-218160:-1:exon
so has part: feature:217797-217926:-1:exon
so has part: feature:216022-216188:-1:exon
so has part: feature:215804-215949:-1:exon
so has part: feature:215624-215723:-1:exon
so has part: feature:215275-215545:-1:exon
so has part: feature:214564-214671:-1:exon
so has part: feature:213101-213184:-1:exon

XP_037552765.1
type: Protein
SIO_000068: ncbiprotein

position:213101:-1
position: 213101
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:230945:-1
position: 230945
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:230925-230945:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:230820-230859:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:226420-226491:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:222176-222220:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:222067-222093:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:221945-221992:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:221832-221864:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:221714-221755:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:221607-221642:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:219878-220020:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:219651-219803:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:218006-218160:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:217797-217926:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:216022-216188:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:215804-215949:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:215624-215723:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:215275-215545:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:214564-214671:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:213101-213184:-1:exon

LOC119429172
type: Gene
subclass of: SO_0000704
RO_0002162: 451745
gene: LOC119429172
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: <244394..275905
location: region:244394-275905:1
so has part: feature:244394-275905:1:exon
subclass of: SO_0000010

119429172
type: Gene
SIO_000068: ncbigene

position:244394:1
position: 244394
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

position:275905:1
position: 275905
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:244394-275905:1:exon

LOC119429172
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 451745
gene: LOC119429172
product: ubiquitin-protein ligase E3A
inference: similar to RNA sequence (same species):INSD:GELZ01025409.1
exception: annotated by transcript or proteomic data
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: added 277 bases not found in genome assembly; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 25 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_037696852.1
SIO_010081: LOC119429172
subclass of: SO_0000673
so part of: LOC119429172
location: join(<244394..244438,245503..245792,256537..257789,258005..258149,266525..266730,266801..266965,269207..269362,269431..269504,274939..275082,275190..275905)
location: region:244394-275905:1
so has part: feature:244394-244438:1:exon
so has part: feature:245503-245792:1:exon
so has part: feature:256537-257789:1:exon
so has part: feature:258005-258149:1:exon
so has part: feature:266525-266730:1:exon
so has part: feature:266801-266965:1:exon
so has part: feature:269207-269362:1:exon
so has part: feature:269431-269504:1:exon
so has part: feature:274939-275082:1:exon
so has part: feature:275190-275905:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:244394-244438:1:exon

position:244438:1
position: 244438
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:245503-245792:1:exon

position:245503:1
position: 245503
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:245792:1
position: 245792
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:256537-257789:1:exon

position:256537:1
position: 256537
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:257789:1
position: 257789
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:258005-258149:1:exon

position:258005:1
position: 258005
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:258149:1
position: 258149
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:266525-266730:1:exon

position:266525:1
position: 266525
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:266730:1
position: 266730
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:266801-266965:1:exon

position:266801:1
position: 266801
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:266965:1
position: 266965
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:269207-269362:1:exon

position:269207:1
position: 269207
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:269362:1
position: 269362
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:269431-269504:1:exon

position:269431:1
position: 269431
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:269504:1
position: 269504
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:274939-275082:1:exon

position:274939:1
position: 274939
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:275082:1
position: 275082
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:275190-275905:1:exon

position:275190:1
position: 275190
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC119429172
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 451745
gene: LOC119429172
inference: similar to RNA sequence (same species):INSD:GELZ01025409.1
exception: annotated by transcript or proteomic data
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: added 77 bases not found in genome assembly; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 2
product: ubiquitin-protein ligase E3A
translation: MSSEEKEDCECATPQAESSPARGPERENEEPDTENPEASRMKRAAAKHLIERYYHQLTEGCGTESCSNSWCASSLGFSRMDNNAAAVKALELYKVNAKLCDPHPSKKGTASAYLEGSALCNRKMNHRDVHAVRDNFKDVSYLTEEKVYEILDICGEKKDYSPLIRVIGRVFSSSEGLVQSFRRSKPHTKEELKSLQGKDEDKDEDEKEAAACSATAMDEDSPTSSALSRLGEGSSGENDVQKLAPDEVSVDIEAVRRVYERLLSNEKIEAAFLNALVYLSPNVECDLAYHNVYSRDPNYLNLFVIVMENSNLHSPEYLEIALPQFCKAMSKLPLAAQAKLARLWSHYSAEQIRRMMETFQQLITFKVISNEFNSRNLVNDDDAVVAATKCLKIVYYANVLGGDLDVENNEEDDDEPIPESSELTLQELLGEERRNKKGPRVDPVETELGIRTNDCRQPLISFEEFVNEPLNEVLEMDKDYTFFKVETENKFSFMTCPFILNAVTKNLGLYYDNRIRMYSERRITVLYSLVQGQQLNPYLRLKVRRDHIIDDALVRLEMIAMENPADLKKQLYVEFEGEQGVDEGGVSKEFFQLVVEEIFNPDIGMFTHDERTRLFWFNPSSFENEGQYTLIGIVLGLAIYNNCILDVHFPMVVYRKLMGKKGTFRDLADANPVLCQSLKELLEYEGSVEDDMMITFQISETDLFGNPLMYDLRENGDKIPVTNDNRKEFVTQYSEYILNKSVEKQFKAFRRGFHMVTNESPLKYLFRPEEIELLICGSRNLDFHALEETTEYDGGYNKDSRIIKEFWETLHLFSEEQKRLFLQFTTGTDRAPVGGLGKLKMIIAKNGPDTDRLPTSHTCFNVLLLPEYSSKDKLRERLLKAITYAKGFGML
SIO_010081: LOC119429172
subclass of: SO_0000673
so part of: LOC119429172
location: join(<244394..244438,245503..245792,256537..257789,258005..258149,266525..266730,266801..266965,269207..269362,269431..269504,274939..275082,275190..275310)
location: region:244394-275310:1
so has part: feature:244394-244438:1:exon
so has part: feature:245503-245792:1:exon
so has part: feature:256537-257789:1:exon
so has part: feature:258005-258149:1:exon
so has part: feature:266525-266730:1:exon
so has part: feature:266801-266965:1:exon
so has part: feature:269207-269362:1:exon
so has part: feature:269431-269504:1:exon
so has part: feature:274939-275082:1:exon
so has part: feature:275190-275310:1:exon

XP_037552780.1
type: Protein
SIO_000068: ncbiprotein

position:275310:1
position: 275310
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:244394-244438:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:245503-245792:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:256537-257789:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:258005-258149:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:266525-266730:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:266801-266965:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:269207-269362:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:269431-269504:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:274939-275082:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:275190-275310:1:exon

LOC119429177
type: Gene
subclass of: SO_0000704
RO_0002162: 451745
gene: LOC119429177
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: 284321..285368
location: region:284321-285368:1
so has part: feature:284321-285368:1:exon

119429177
type: Gene
SIO_000068: ncbigene

position:284321:1
position: 284321
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:285368:1
position: 285368
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:284321-285368:1:exon

LOC119429177
type: Exon
subclass of: SO_0000147
RO_0002162: 451745
gene: LOC119429177
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein
pseudo: true
SIO_010081: LOC119429177
subclass of: SO_0000673
so part of: LOC119429177
location: 284321..284729
location: region:284321-284729:1
so has part: feature:284321-284729:1:exon

position:284729:1
position: 284729
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:284321-284729:1:exon

LOC119429177
type: Exon
subclass of: SO_0000147
RO_0002162: 451745
gene: LOC119429177
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein
pseudo: true
SIO_010081: LOC119429177
subclass of: SO_0000673
so part of: LOC119429177
location: 284862..285119
location: region:284862-285119:1
so has part: feature:284862-285119:1:exon

position:284862:1
position: 284862
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:285119:1
position: 285119
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:284862-285119:1:exon

LOC119429177
type: Exon
subclass of: SO_0000147
RO_0002162: 451745
gene: LOC119429177
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein
pseudo: true
SIO_010081: LOC119429177
subclass of: SO_0000673
so part of: LOC119429177
location: 285251..285368
location: region:285251-285368:1
so has part: feature:285251-285368:1:exon

position:285251:1
position: 285251
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:285251-285368:1:exon

atp1b1b
type: Gene
subclass of: SO_0000704
RO_0002162: 451745
gene: atp1b1b
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(296565..301751)
location: region:296565-301751:-1
so has part: feature:296565-301751:-1:exon
subclass of: SO_0000010

119429163
type: Gene
SIO_000068: ncbigene

position:296565:-1
position: 296565
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:301751:-1
position: 301751
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:296565-301751:-1:exon

atp1b1b
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 451745
gene: atp1b1b
product: ATPase Na+/K+ transporting subunit beta 1b
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 35 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_037696841.1
SIO_010081: atp1b1b
subclass of: SO_0000673
so part of: atp1b1b
location: complement(join(296565..297753,297853..297936,298738..298922,298993..299148,300264..300392,301581..301751))
location: region:296565-301751:-1
so has part: feature:301581-301751:-1:exon
so has part: feature:300264-300392:-1:exon
so has part: feature:298993-299148:-1:exon
so has part: feature:298738-298922:-1:exon
so has part: feature:297853-297936:-1:exon
so has part: feature:296565-297753:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:301581-301751:-1:exon

position:301581:-1
position: 301581
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:300264-300392:-1:exon

position:300264:-1
position: 300264
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:300392:-1
position: 300392
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:298993-299148:-1:exon

position:298993:-1
position: 298993
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:299148:-1
position: 299148
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:298738-298922:-1:exon

position:298738:-1
position: 298738
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:298922:-1
position: 298922
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:297853-297936:-1:exon

position:297853:-1
position: 297853
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:297936:-1
position: 297936
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:296565-297753:-1:exon

position:297753:-1
position: 297753
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

atp1b1b
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 451745
gene: atp1b1b
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: sodium/potassium-transporting ATPase subunit beta-1b
translation: MAANKDDGGWKKLLWNSDTGELLGRTGGSWLKITLFYVVFYGCLGGIFVGTIQALLLTLDDFKPTWQDRVAPPGLSHTPRSDKGEVNFHPKELESYLPYTKAMREFMSKYDEEKQKDSMKFDDCGTEPDTYRNRGDLDSSTGTKKACKFSRELLGPCSGLEDRDFGFSQGKPCLIVKLNRIVNFRPRPPASNESIPEEAQPKVQPNVVPLFCTHKKEEDADKIGEIKYYGIGGGFPLQYYPYYGKRLHLHYLQPLVALQFTNLTRNTELRIECKVFGQNIDYNEKDRYQGRFDIKINVRDS
SIO_010081: atp1b1b
subclass of: SO_0000673
so part of: atp1b1b
location: complement(join(297493..297753,297853..297936,298738..298922,298993..299148,300264..300392,301581..301671))
location: region:297493-301671:-1
so has part: feature:301581-301671:-1:exon
so has part: feature:300264-300392:-1:exon
so has part: feature:298993-299148:-1:exon
so has part: feature:298738-298922:-1:exon
so has part: feature:297853-297936:-1:exon
so has part: feature:297493-297753:-1:exon

XP_037552769.1
type: Protein
SIO_000068: ncbiprotein

position:297493:-1
position: 297493
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:301671:-1
position: 301671
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:301581-301671:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:300264-300392:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:298993-299148:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:298738-298922:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:297853-297936:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:297493-297753:-1:exon

LOC119429162
type: Gene
subclass of: SO_0000704
RO_0002162: 451745
gene: LOC119429162
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(305335..323328)
location: region:305335-323328:-1
so has part: feature:305335-323328:-1:exon
subclass of: SO_0000010

119429162
type: Gene
SIO_000068: ncbigene

position:305335:-1
position: 305335
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:323328:-1
position: 323328
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:305335-323328:-1:exon

LOC119429162
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 451745
gene: LOC119429162
product: cyclic nucleotide-gated channel cone photoreceptor subunit alpha
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 35 Proteins, and 95% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_037696840.1
SIO_010081: LOC119429162
subclass of: SO_0000673
so part of: LOC119429162
location: complement(join(305335..306860,309357..309463,309538..309639,314822..314932,316922..316978,321275..321367,323157..323328))
location: region:305335-323328:-1
so has part: feature:323157-323328:-1:exon
so has part: feature:321275-321367:-1:exon
so has part: feature:316922-316978:-1:exon
so has part: feature:314822-314932:-1:exon
so has part: feature:309538-309639:-1:exon
so has part: feature:309357-309463:-1:exon
so has part: feature:305335-306860:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:323157-323328:-1:exon

position:323157:-1
position: 323157
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:321275-321367:-1:exon

position:321275:-1
position: 321275
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:321367:-1
position: 321367
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:316922-316978:-1:exon

position:316922:-1
position: 316922
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:316978:-1
position: 316978
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:314822-314932:-1:exon

position:314822:-1
position: 314822
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:314932:-1
position: 314932
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:309538-309639:-1:exon

position:309538:-1
position: 309538
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:309639:-1
position: 309639
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:309357-309463:-1:exon

position:309357:-1
position: 309357
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:309463:-1
position: 309463
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:305335-306860:-1:exon

position:306860:-1
position: 306860
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC119429162
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 451745
gene: LOC119429162
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cyclic nucleotide-gated channel cone photoreceptor subunit alpha
translation: MMHFWRSSVGPGESSLSRPRTDVIRRSRTRDGQWPLASHNMNNSNNNDGKKDEKKDDKKDDKKDDKKDDKKDDKKDGKKDDKKEEPKEVWIMDPATDLYYFWLCTTSISVFYNLNFLVARSCFNELQYTNLTLWMALDYTSDLIYYADIFVRFRTGFLEQGLLVKDAKVLKEKYMKTRQFKLDILSILPTDIVFLKVGINNPEWRFNRLFRLARLFEFFDRTETRTNFPNIFRIANLVLYIIIIIHWNACLYFAISKVLGFGSDTWVYPDIKNPVNAALTRQYIYCFWWSTLTLTTIGETPPPVRDVEYFFVVADFLTGVLIFATIVGNVGAMISNMNAARVEFQAKIDSIKQYMQFRKVTKDLEARVVKWFDYLWTEGKTCDEKQVLKNLPDKLKAEIAINVHLETLSKVRIFQDCEAGLLIELVLKLQPQVFSPGDYICKKGDIGREMYIIKEGKLAVVADDGITQFVVLSDGAYFGEISILGIKGSKAGNRRTANIRSVGYSDLFALSKDDLMEVLIEYPDAKYALEEKGRAILMKDNLIDESLVAAIDAKDLENKVNQIEHSVDVMTNKFKKLTSQYESSQRKLRQRLCNLSNEVQSLRDEE
SIO_010081: LOC119429162
subclass of: SO_0000673
so part of: LOC119429162
location: complement(join(305506..306860,309357..309463,309538..309639,314822..314932,316922..316978,321275..321363))
location: region:305506-321363:-1
so has part: feature:321275-321363:-1:exon
so has part: feature:316922-316978:-1:exon
so has part: feature:314822-314932:-1:exon
so has part: feature:309538-309639:-1:exon
so has part: feature:309357-309463:-1:exon
so has part: feature:305506-306860:-1:exon

XP_037552768.1
type: Protein
SIO_000068: ncbiprotein

position:305506:-1
position: 305506
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:321363:-1
position: 321363
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:321275-321363:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:316922-316978:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:314822-314932:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:309538-309639:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:309357-309463:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:305506-306860:-1:exon

arhgap1
type: Gene
subclass of: SO_0000704
RO_0002162: 451745
gene: arhgap1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(403154..425648)
location: region:403154-425648:-1
so has part: feature:403154-425648:-1:exon
subclass of: SO_0000010

119429170
type: Gene
SIO_000068: ncbigene

position:403154:-1
position: 403154
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:425648:-1
position: 425648
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:403154-425648:-1:exon

arhgap1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 451745
gene: arhgap1
product: Rho GTPase activating protein 1
inference: similar to RNA sequence (same species):INSD:GELZ01036534.1
exception: annotated by transcript or proteomic data
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: added 284 bases not found in genome assembly; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_037696851.1
SIO_010081: arhgap1
subclass of: SO_0000673
so part of: arhgap1
location: complement(join(403154..404406,404482..404585,408046..408174,408646..>408723,<415684..415770,416110..416241,418396..418483,418556..418648,418739..418869,425567..425648))
location: region:403154-425648:-1
so has part: feature:425567-425648:-1:exon
so has part: feature:418739-418869:-1:exon
so has part: feature:418556-418648:-1:exon
so has part: feature:418396-418483:-1:exon
so has part: feature:416110-416241:-1:exon
so has part: feature:415684-415770:-1:exon
so has part: feature:408646-408723:-1:exon
so has part: feature:408046-408174:-1:exon
so has part: feature:404482-404585:-1:exon
so has part: feature:403154-404406:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:425567-425648:-1:exon

position:425567:-1
position: 425567
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:418739-418869:-1:exon

position:418739:-1
position: 418739
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:418869:-1
position: 418869
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:418556-418648:-1:exon

position:418556:-1
position: 418556
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:418648:-1
position: 418648
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:418396-418483:-1:exon

position:418396:-1
position: 418396
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:418483:-1
position: 418483
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:416110-416241:-1:exon

position:416110:-1
position: 416110
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:416241:-1
position: 416241
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:415684-415770:-1:exon

position:415684:-1
position: 415684
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

position:415770:-1
position: 415770
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:408646-408723:-1:exon

position:408646:-1
position: 408646
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:408723:-1
position: 408723
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 8
SIO_000628: feature:408046-408174:-1:exon

position:408046:-1
position: 408046
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:408174:-1
position: 408174
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:404482-404585:-1:exon

position:404482:-1
position: 404482
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:404585:-1
position: 404585
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:403154-404406:-1:exon

position:404406:-1
position: 404406
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

arhgap1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 451745
gene: arhgap1
inference: similar to RNA sequence (same species):INSD:GELZ01036534.1
exception: annotated by transcript or proteomic data
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: added 284 bases not found in genome assembly; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: rho GTPase-activating protein 1
translation: MSSDLLVDLGEDPATAQLGQLKLATIEDQQWPADDSALTKSDISQDFDAGSPHLPWDHPFYDIARHQIIEVAGDDNFGRKVIVFNACRMPPQHQLDHYKLLMYLKGTLDQYVESDYTLIYFHHGLTSENKLSLGWLRDAYREFDRKYKKNMKALYIVHPTMFFKTLFILFKPIISFKFGRKINYVSYLSELEAVVKCDQLMIPARVREYDNKLRASLKPSAQPPTSPPRSPPLPNQVFGVPLALLRQRDPDGDPVPVVMRDTVSFLSEQGLEIEGIFRRSANVTLVKEVQLRYNSGETVAFREMEDVHLAAVILKTFLRELPEPLLTYQLYNDIVNFTSVSSDNQVEVMKTLVESLPEENAASLRYLITFLAQVSANSEVNKMTTRNLAVVFGPNLLWGRDNAMSLSAIGPINNFARILLDQQHLVFT
SIO_010081: arhgap1
subclass of: SO_0000673
so part of: arhgap1
location: complement(join(404239..404406,404482..404585,408046..408174,408646..>408723,<415684..415770,416110..416241,418396..418483,418556..418648,418739..418862))
location: region:404239-418862:-1
so has part: feature:418739-418862:-1:exon
so has part: feature:418556-418648:-1:exon
so has part: feature:418396-418483:-1:exon
so has part: feature:416110-416241:-1:exon
so has part: feature:415684-415770:-1:exon
so has part: feature:408646-408723:-1:exon
so has part: feature:408046-408174:-1:exon
so has part: feature:404482-404585:-1:exon
so has part: feature:404239-404406:-1:exon

XP_037552779.1
type: Protein
SIO_000068: ncbiprotein

position:404239:-1
position: 404239
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:418862:-1
position: 418862
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:418739-418862:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:418556-418648:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:418396-418483:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:416110-416241:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:415684-415770:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:408646-408723:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:408046-408174:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:404482-404585:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:404239-404406:-1:exon

LOC119429171
type: Gene
subclass of: SO_0000704
RO_0002162: 451745
gene: LOC119429171
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 412454..412894
location: region:412454-412894:1
so has part: feature:412454-412894:1:exon
subclass of: SO_0000011

119429171
type: Gene
SIO_000068: ncbigene

position:412454:1
position: 412454
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:412894:1
position: 412894
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:412454-412894:1:exon

LOC119429171
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 451745
nc RNA class: lncRNA
gene: LOC119429171
product: uncharacterized LOC119429171
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XR_005187738.1
SIO_010081: LOC119429171
subclass of: SO_0000673
so part of: LOC119429171
location: join(412454..412553,412633..412740,412817..412894)
location: region:412454-412894:1
so has part: feature:412454-412553:1:exon
so has part: feature:412633-412740:1:exon
so has part: feature:412817-412894:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:412454-412553:1:exon

position:412553:1
position: 412553
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:412633-412740:1:exon

position:412633:1
position: 412633
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:412740:1
position: 412740
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:412817-412894:1:exon

position:412817:1
position: 412817
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

arl6ip6
type: Gene
subclass of: SO_0000704
RO_0002162: 451745
gene: arl6ip6
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 426092..429540
location: region:426092-429540:1
so has part: feature:426092-429540:1:exon
subclass of: SO_0000010

119429156
type: Gene
SIO_000068: ncbigene

position:426092:1
position: 426092
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:429540:1
position: 429540
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:426092-429540:1:exon

arl6ip6
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 451745
gene: arl6ip6
product: ADP-ribosylation factor-like 6 interacting protein 6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_037696835.1
SIO_010081: arl6ip6
subclass of: SO_0000673
so part of: arl6ip6
location: join(426092..426432,428825..428878,429008..429140,429227..429540)
location: region:426092-429540:1
so has part: feature:426092-426432:1:exon
so has part: feature:428825-428878:1:exon
so has part: feature:429008-429140:1:exon
so has part: feature:429227-429540:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:426092-426432:1:exon

position:426432:1
position: 426432
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:428825-428878:1:exon

position:428825:1
position: 428825
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:428878:1
position: 428878
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:429008-429140:1:exon

position:429008:1
position: 429008
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:429140:1
position: 429140
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:429227-429540:1:exon

position:429227:1
position: 429227
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

arl6ip6
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 451745
gene: arl6ip6
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ADP-ribosylation factor-like protein 6-interacting protein 6
translation: MSGGRPGGSRSEPRSGFRPWFGSVLSVLGSAVTVAVVGFFCALVYPILRELRAERMTEESGTEERVLGFWTILVLAVLVGCVCCVFSWTITYLDTHQPGRTFPSLLSLRSFRHEPGFNLKSGVAALNGIMVVLTVIWSLS
SIO_010081: arl6ip6
subclass of: SO_0000673
so part of: arl6ip6
location: join(426285..426432,428825..428878,429008..429140,429227..429314)
location: region:426285-429314:1
so has part: feature:426285-426432:1:exon
so has part: feature:428825-428878:1:exon
so has part: feature:429008-429140:1:exon
so has part: feature:429227-429314:1:exon

XP_037552763.1
type: Protein
SIO_000068: ncbiprotein

position:426285:1
position: 426285
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:429314:1
position: 429314
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:426285-426432:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:428825-428878:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:429008-429140:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:429227-429314:1:exon

LOC119429157
type: Gene
subclass of: SO_0000704
RO_0002162: 451745
gene: LOC119429157
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(429691..430062)
location: region:429691-430062:-1
so has part: feature:429691-430062:-1:exon
subclass of: SO_0000011

119429157
type: Gene
SIO_000068: ncbigene

position:429691:-1
position: 429691
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:430062:-1
position: 430062
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:429691-430062:-1:exon

LOC119429157
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 451745
nc RNA class: lncRNA
gene: LOC119429157
product: uncharacterized LOC119429157
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XR_005187736.1
SIO_010081: LOC119429157
subclass of: SO_0000673
so part of: LOC119429157
location: complement(join(429691..429726,429758..429890,430004..430062))
location: region:429691-430062:-1
so has part: feature:430004-430062:-1:exon
so has part: feature:429758-429890:-1:exon
so has part: feature:429691-429726:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:430004-430062:-1:exon

position:430004:-1
position: 430004
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:429758-429890:-1:exon

position:429758:-1
position: 429758
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:429890:-1
position: 429890
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:429691-429726:-1:exon

position:429726:-1
position: 429726
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

slc19a2
type: Gene
subclass of: SO_0000704
RO_0002162: 451745
gene: slc19a2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(435377..448827)
location: region:435377-448827:-1
so has part: feature:435377-448827:-1:exon
subclass of: SO_0000010

119429164
type: Gene
SIO_000068: ncbigene

position:435377:-1
position: 435377
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:448827:-1
position: 448827
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:435377-448827:-1:exon

slc19a2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 451745
gene: slc19a2
product: solute carrier family 19 member 2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 15 Proteins, and 40% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_037696842.1
SIO_010081: slc19a2
subclass of: SO_0000673
so part of: slc19a2
location: complement(join(435377..435609,435678..435819,439039..439231,446099..446345,446412..446945,448678..448827))
location: region:435377-448827:-1
so has part: feature:448678-448827:-1:exon
so has part: feature:446412-446945:-1:exon
so has part: feature:446099-446345:-1:exon
so has part: feature:439039-439231:-1:exon
so has part: feature:435678-435819:-1:exon
so has part: feature:435377-435609:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:448678-448827:-1:exon

position:448678:-1
position: 448678
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:446412-446945:-1:exon

position:446412:-1
position: 446412
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:446945:-1
position: 446945
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:446099-446345:-1:exon

position:446099:-1
position: 446099
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:446345:-1
position: 446345
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:439039-439231:-1:exon

position:439039:-1
position: 439039
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:439231:-1
position: 439231
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:435678-435819:-1:exon

position:435678:-1
position: 435678
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:435819:-1
position: 435819
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:435377-435609:-1:exon

position:435609:-1
position: 435609
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

slc19a2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 451745
gene: slc19a2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: thiamine transporter 1
translation: MSAVFPTAVLCVYGFFSSMRPSEPFLTAYLMGPDQNLTETQVVNEIYPIWTYSYLVLLFPVFLVTDFLCYKPVLVLQASSLVVTYTMLWKARGMLAMQLLEFFFGLATATEVAYYSYIYSVVESTHYQRVTGFCRSVTLLGSAAGSLIGQLLLSVAEVHLLHLVIVTMASAAVAFIAPWFLPMPKRSLFFHKNPVEVEERACIRSSTSQTFQVEDSESMVSRSSKPAGGSRGLIEVLQMLFSDFLQCYRCRPLLAWSVWWALATCGYFLILNYVQALWETIRPSRDHVIYNGYVETLSTLLGAVAALLVGCLPVSWSLWGELVLCVLSLLMAVCVFAMDLLKNIWVCYGLYILFRTIYMLLITVATYQIAASLSMQRYALVFGVNTFVALLLQTLLTVIVVDSAGLGLDVYSQFLIYGTYFAVISVIFLLAGLCRLMSMRRSKEEVLAGVQAASNPPANGEMLYL
SIO_010081: slc19a2
subclass of: SO_0000673
so part of: slc19a2
location: complement(join(435451..435609,435678..435819,439039..439231,446099..446345,446412..446945,448678..448800))
location: region:435451-448800:-1
so has part: feature:448678-448800:-1:exon
so has part: feature:446412-446945:-1:exon
so has part: feature:446099-446345:-1:exon
so has part: feature:439039-439231:-1:exon
so has part: feature:435678-435819:-1:exon
so has part: feature:435451-435609:-1:exon

XP_037552770.1
type: Protein
SIO_000068: ncbiprotein

position:435451:-1
position: 435451
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:448800:-1
position: 448800
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:448678-448800:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:446412-446945:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:446099-446345:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:439039-439231:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:435678-435819:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:435451-435609:-1:exon

atg3
type: Gene
subclass of: SO_0000704
RO_0002162: 451745
gene: atg3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(450087..479176)
location: region:450087-479176:-1
so has part: feature:450087-479176:-1:exon
subclass of: SO_0000010

119429165
type: Gene
SIO_000068: ncbigene

position:450087:-1
position: 450087
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:479176:-1
position: 479176
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:450087-479176:-1:exon

atg3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 451745
gene: atg3
product: autophagy related 3, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 19 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_037696844.1
SIO_010081: atg3
subclass of: SO_0000673
so part of: atg3
location: complement(join(450087..450522,452426..452494,452645..452772,452846..452998,463975..464009,464090..464171,465644..465696,469446..469553,469940..470010,478744..478793,478871..478912,478996..479176))
location: region:450087-479176:-1
so has part: feature:478996-479176:-1:exon
so has part: feature:478871-478912:-1:exon
so has part: feature:478744-478793:-1:exon
so has part: feature:469940-470010:-1:exon
so has part: feature:469446-469553:-1:exon
so has part: feature:465644-465696:-1:exon
so has part: feature:464090-464171:-1:exon
so has part: feature:463975-464009:-1:exon
so has part: feature:452846-452998:-1:exon
so has part: feature:452645-452772:-1:exon
so has part: feature:452426-452494:-1:exon
so has part: feature:450087-450522:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:478996-479176:-1:exon

position:478996:-1
position: 478996
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:478871-478912:-1:exon

position:478871:-1
position: 478871
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:478912:-1
position: 478912
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:478744-478793:-1:exon

position:478744:-1
position: 478744
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:478793:-1
position: 478793
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:469940-470010:-1:exon

position:469940:-1
position: 469940
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:470010:-1
position: 470010
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:469446-469553:-1:exon

position:469446:-1
position: 469446
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:469553:-1
position: 469553
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:465644-465696:-1:exon

position:465644:-1
position: 465644
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:465696:-1
position: 465696
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:464090-464171:-1:exon

position:464090:-1
position: 464090
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:464171:-1
position: 464171
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:463975-464009:-1:exon

position:463975:-1
position: 463975
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:464009:-1
position: 464009
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:452846-452998:-1:exon

position:452846:-1
position: 452846
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:452998:-1
position: 452998
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:452645-452772:-1:exon

position:452645:-1
position: 452645
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:452772:-1
position: 452772
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:452426-452494:-1:exon

position:452426:-1
position: 452426
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:452494:-1
position: 452494
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:450087-450522:-1:exon

position:450522:-1
position: 450522
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

atg3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 451745
gene: atg3
product: autophagy related 3, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_037696843.1
SIO_010081: atg3
subclass of: SO_0000673
so part of: atg3
location: complement(join(450087..450522,452426..452494,452645..452772,452846..452998,463975..464009,464090..464171,465644..465699,469446..469553,469940..470010,478744..478793,478871..478912,478996..479176))
location: region:450087-479176:-1
so has part: feature:478996-479176:-1:exon
so has part: feature:478871-478912:-1:exon
so has part: feature:478744-478793:-1:exon
so has part: feature:469940-470010:-1:exon
so has part: feature:469446-469553:-1:exon
so has part: feature:465644-465699:-1:exon
so has part: feature:464090-464171:-1:exon
so has part: feature:463975-464009:-1:exon
so has part: feature:452846-452998:-1:exon
so has part: feature:452645-452772:-1:exon
so has part: feature:452426-452494:-1:exon
so has part: feature:450087-450522:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:478996-479176:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:478871-478912:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:478744-478793:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:469940-470010:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:469446-469553:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:465644-465699:-1:exon

position:465699:-1
position: 465699
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:464090-464171:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:463975-464009:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:452846-452998:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:452645-452772:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:452426-452494:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:450087-450522:-1:exon

atg3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 451745
gene: atg3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ubiquitin-like-conjugating enzyme ATG3 isoform X2
translation: MQNVINTVKGTALGVAEFLTPVLKESKFKETGVITPEEFVAAGDHLVHHCPTWKWATGEESKVKPYLPPDKQFLLTRNVPCYKRCKQMEYSDELEAIIEEDDGDGGWVDTYHNSSVLGVTDTIRDISLDNNKDQNMNAPSAACCADDEEDEEGEAADMEEYEESGLLETDEATLDTSKLVEAKVKAEAGSEDAILQTRTYDLYITYDKYYQTPRLWLFGYDEDRQPLTVEQMYEDISQDHVKKTVTIENHPHLPPPAMCSVHPCRHAEVMKKIIETVAEGGGELGVHMYLLIFLKFVQAVIPTIEYDYTRHFTM
SIO_010081: atg3
subclass of: SO_0000673
so part of: atg3
location: complement(join(450441..450522,452426..452494,452645..452772,452846..452998,463975..464009,464090..464171,465644..465696,469446..469553,469940..470010,478744..478793,478871..478912,478996..479067))
location: region:450441-479067:-1
so has part: feature:478996-479067:-1:exon
so has part: feature:478871-478912:-1:exon
so has part: feature:478744-478793:-1:exon
so has part: feature:469940-470010:-1:exon
so has part: feature:469446-469553:-1:exon
so has part: feature:465644-465696:-1:exon
so has part: feature:464090-464171:-1:exon
so has part: feature:463975-464009:-1:exon
so has part: feature:452846-452998:-1:exon
so has part: feature:452645-452772:-1:exon
so has part: feature:452426-452494:-1:exon
so has part: feature:450441-450522:-1:exon

XP_037552772.1
type: Protein
SIO_000068: ncbiprotein

position:450441:-1
position: 450441
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:479067:-1
position: 479067
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:478996-479067:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:478871-478912:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:478744-478793:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:469940-470010:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:469446-469553:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:465644-465696:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:464090-464171:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:463975-464009:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:452846-452998:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:452645-452772:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:452426-452494:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:450441-450522:-1:exon

atg3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 451745
gene: atg3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ubiquitin-like-conjugating enzyme ATG3 isoform X1
translation: MQNVINTVKGTALGVAEFLTPVLKESKFKETGVITPEEFVAAGDHLVHHCPTWKWATGEESKVKPYLPPDKQFLLTRNVPCYKRCKQMEYSDELEAIIEEDDGDGGWVDTYHNSTGVLGVTDTIRDISLDNNKDQNMNAPSAACCADDEEDEEGEAADMEEYEESGLLETDEATLDTSKLVEAKVKAEAGSEDAILQTRTYDLYITYDKYYQTPRLWLFGYDEDRQPLTVEQMYEDISQDHVKKTVTIENHPHLPPPAMCSVHPCRHAEVMKKIIETVAEGGGELGVHMYLLIFLKFVQAVIPTIEYDYTRHFTM
SIO_010081: atg3
subclass of: SO_0000673
so part of: atg3
location: complement(join(450441..450522,452426..452494,452645..452772,452846..452998,463975..464009,464090..464171,465644..465699,469446..469553,469940..470010,478744..478793,478871..478912,478996..479067))
location: region:450441-479067:-1
so has part: feature:478996-479067:-1:exon
so has part: feature:478871-478912:-1:exon
so has part: feature:478744-478793:-1:exon
so has part: feature:469940-470010:-1:exon
so has part: feature:469446-469553:-1:exon
so has part: feature:465644-465699:-1:exon
so has part: feature:464090-464171:-1:exon
so has part: feature:463975-464009:-1:exon
so has part: feature:452846-452998:-1:exon
so has part: feature:452645-452772:-1:exon
so has part: feature:452426-452494:-1:exon
so has part: feature:450441-450522:-1:exon

XP_037552771.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:478996-479067:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:478871-478912:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:478744-478793:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:469940-470010:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:469446-469553:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:465644-465699:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:464090-464171:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:463975-464009:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:452846-452998:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:452645-452772:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:452426-452494:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:450441-450522:-1:exon

cars2
type: Gene
subclass of: SO_0000704
RO_0002162: 451745
gene: cars2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: <491244..509920
location: region:491244-509920:1
so has part: feature:491244-509920:1:exon
subclass of: SO_0000010

119429150
type: Gene
SIO_000068: ncbigene

position:491244:1
position: 491244
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

position:509920:1
position: 509920
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:491244-509920:1:exon

cars2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 451745
gene: cars2
product: cysteinyl-tRNA synthetase 2, mitochondrial
inference: similar to RNA sequence (same species):INSD:GELZ01001855.1
exception: annotated by transcript or proteomic data
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: added 242 bases not found in genome assembly; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_037696833.1
SIO_010081: cars2
subclass of: SO_0000673
so part of: cars2
location: join(<491244..491349,491429..491509,491624..491753,494453..494586,498059..498126,503361..503427,503518..503656,503745..503868,509313..509411,509485..509691,509764..509920)
location: region:491244-509920:1
so has part: feature:491244-491349:1:exon
so has part: feature:491429-491509:1:exon
so has part: feature:491624-491753:1:exon
so has part: feature:494453-494586:1:exon
so has part: feature:498059-498126:1:exon
so has part: feature:503361-503427:1:exon
so has part: feature:503518-503656:1:exon
so has part: feature:503745-503868:1:exon
so has part: feature:509313-509411:1:exon
so has part: feature:509485-509691:1:exon
so has part: feature:509764-509920:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:491244-491349:1:exon

position:491349:1
position: 491349
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:491429-491509:1:exon

position:491429:1
position: 491429
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:491509:1
position: 491509
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:491624-491753:1:exon

position:491624:1
position: 491624
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:491753:1
position: 491753
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:494453-494586:1:exon

position:494453:1
position: 494453
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:494586:1
position: 494586
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:498059-498126:1:exon

position:498059:1
position: 498059
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:498126:1
position: 498126
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:503361-503427:1:exon

position:503361:1
position: 503361
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:503427:1
position: 503427
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:503518-503656:1:exon

position:503518:1
position: 503518
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:503656:1
position: 503656
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:503745-503868:1:exon

position:503745:1
position: 503745
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:503868:1
position: 503868
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:509313-509411:1:exon

position:509313:1
position: 509313
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:509411:1
position: 509411
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:509485-509691:1:exon

position:509485:1
position: 509485
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:509691:1
position: 509691
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:509764-509920:1:exon

position:509764:1
position: 509764
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

cars2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 451745
gene: cars2
inference: similar to RNA sequence (same species):INSD:GELZ01001855.1
exception: annotated by transcript or proteomic data
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: added 120 bases not found in genome assembly; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cysteine--tRNA ligase, mitochondrial
translation: MVITDIDDKIIRRSWEENVSPSVISRMYEEEFKRDMLSLKVIPPAVYLRVTENVHHIVAFIERIIKNGHAYTTKEGDVYFDIQSIGDRYGKFVGASGPPVEQSSSDKRDPRDFALWKHSKPQEPYWESPWGRGRPGWHIECSTIASCVFGAQLDLHSGGIDLAFPHHENEVAQSEAHHQCRQWANYFLHSGHLHLKGSAEKMSKSLKNYVTIKDFLQSHSANEFRMFCLLSKYRSAIDYSDGSMLEARSTLETVCNFMEAARAYMKGQMLTAPVQEAVLWERLAEGKSTVLKSLADDFDTPRAISALMDLVYHGNCQLQPVATSDGVVRSPAVFGAMISYIREVLDMLGIDLLHSREAEVSSSCGVLRPVVEQLTRFRSEVRAFALTRQDDPSCAKPGRHPDRIPLLRACDALRDDLAPLGVVIKDRGASSTWEIKVGQTRPKVHHEDQETGS
SIO_010081: cars2
subclass of: SO_0000673
so part of: cars2
location: join(<491244..491349,491429..491509,491624..491753,494453..494586,498059..498126,503361..503427,503518..503656,503745..503868,509313..509411,509485..509691,509764..509850)
location: region:491244-509850:1
so has part: feature:491244-491349:1:exon
so has part: feature:491429-491509:1:exon
so has part: feature:491624-491753:1:exon
so has part: feature:494453-494586:1:exon
so has part: feature:498059-498126:1:exon
so has part: feature:503361-503427:1:exon
so has part: feature:503518-503656:1:exon
so has part: feature:503745-503868:1:exon
so has part: feature:509313-509411:1:exon
so has part: feature:509485-509691:1:exon
so has part: feature:509764-509850:1:exon

XP_037552761.1
type: Protein
SIO_000068: ncbiprotein

position:509850:1
position: 509850
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:491244-491349:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:491429-491509:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:491624-491753:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:494453-494586:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:498059-498126:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:503361-503427:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:503518-503656:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:503745-503868:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:509313-509411:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:509485-509691:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:509764-509850:1:exon

LOC119429178
type: Gene
subclass of: SO_0000704
RO_0002162: 451745
gene: LOC119429178
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(526625..539700)
location: region:526625-539700:-1
so has part: feature:526625-539700:-1:exon
subclass of: SO_0000010

119429178
type: Gene
SIO_000068: ncbigene

position:526625:-1
position: 526625
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:539700:-1
position: 539700
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:526625-539700:-1:exon

LOC119429178
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 451745
gene: LOC119429178
product: ankyrin repeat domain-containing protein 10
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 72% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_037696856.1
SIO_010081: LOC119429178
subclass of: SO_0000673
so part of: LOC119429178
location: complement(join(526625..526893,527345..527419,527485..527705,537860..538008,539481..539700))
location: region:526625-539700:-1
so has part: feature:539481-539700:-1:exon
so has part: feature:537860-538008:-1:exon
so has part: feature:527485-527705:-1:exon
so has part: feature:527345-527419:-1:exon
so has part: feature:526625-526893:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:539481-539700:-1:exon

position:539481:-1
position: 539481
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:537860-538008:-1:exon

position:537860:-1
position: 537860
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:538008:-1
position: 538008
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:527485-527705:-1:exon

position:527485:-1
position: 527485
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:527705:-1
position: 527705
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:527345-527419:-1:exon

position:527345:-1
position: 527345
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:527419:-1
position: 527419
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:526625-526893:-1:exon

position:526893:-1
position: 526893
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC119429178
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 451745
gene: LOC119429178
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ankyrin repeat domain-containing protein 10
translation: MSAAPGADSCRDQVLLSQFPVHRACRDGDLLGLVSLVERLSDQAHLTAEDSGYGWTPLHWAAHCGQLECVVHLVQLGCEVNTASSRLNQTPAHAAAFGGHPHCVVWLSQAGADVNRLRNSSGQTAADLAHAHGFLDCFCFMSSAQTDLQQFRGLQNGAGGAPCGRGLLYRKRQRPVREVALMKKARRAEAAPEQQVVQRSPAQEEEDMNLDLSPADESTTALPSSPHHPPASDHTDPCVSPPSADMCGSLHLSGSPGGSWRLMGEDCRDFLLYGHCHGFGDTAEDLSDSSAGVQLHHSSQHTC
SIO_010081: LOC119429178
subclass of: SO_0000673
so part of: LOC119429178
location: complement(join(526625..526893,527345..527419,527485..527705,537860..538008,539481..539678))
location: region:526625-539678:-1
so has part: feature:539481-539678:-1:exon
so has part: feature:537860-538008:-1:exon
so has part: feature:527485-527705:-1:exon
so has part: feature:527345-527419:-1:exon
so has part: feature:526625-526893:-1:exon

XP_037552784.1
type: Protein
SIO_000068: ncbiprotein

position:539678:-1
position: 539678
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:539481-539678:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:537860-538008:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:527485-527705:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:527345-527419:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:526625-526893:-1:exon

LOC119429179
type: Gene
subclass of: SO_0000704
RO_0002162: 451745
gene: LOC119429179
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 540063..558113
location: region:540063-558113:1
so has part: feature:540063-558113:1:exon
subclass of: SO_0000010

119429179
type: Gene
SIO_000068: ncbigene

position:540063:1
position: 540063
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:558113:1
position: 558113
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:540063-558113:1:exon

LOC119429179
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 451745
gene: LOC119429179
product: heat shock transcription factor 2 binding protein
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 49% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_037696858.1
SIO_010081: LOC119429179
subclass of: SO_0000673
so part of: LOC119429179
location: join(540063..540139,540306..540387,541830..541920,542054..542169,544796..544945,556912..557056,557251..557368,557582..557685,557791..557990,558105..558113)
location: region:540063-558113:1
so has part: feature:540063-540139:1:exon
so has part: feature:540306-540387:1:exon
so has part: feature:541830-541920:1:exon
so has part: feature:542054-542169:1:exon
so has part: feature:544796-544945:1:exon
so has part: feature:556912-557056:1:exon
so has part: feature:557251-557368:1:exon
so has part: feature:557582-557685:1:exon
so has part: feature:557791-557990:1:exon
so has part: feature:558105-558113:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:540063-540139:1:exon

position:540139:1
position: 540139
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:540306-540387:1:exon

position:540306:1
position: 540306
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:540387:1
position: 540387
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:541830-541920:1:exon

position:541830:1
position: 541830
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:541920:1
position: 541920
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:542054-542169:1:exon

position:542054:1
position: 542054
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:542169:1
position: 542169
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:544796-544945:1:exon

position:544796:1
position: 544796
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:544945:1
position: 544945
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:556912-557056:1:exon

position:556912:1
position: 556912
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:557056:1
position: 557056
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:557251-557368:1:exon

position:557251:1
position: 557251
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:557368:1
position: 557368
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:557582-557685:1:exon

position:557582:1
position: 557582
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:557685:1
position: 557685
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:557791-557990:1:exon

position:557791:1
position: 557791
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:557990:1
position: 557990
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:558105-558113:1:exon

position:558105:1
position: 558105
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC119429179
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 451745
gene: LOC119429179
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: heat shock factor 2-binding protein
translation: MAVVVTGKRLDQNHSRTKGSFVRVRRTDLEKLTTEVMQLREFLPRVLNGLCVDKEHLGHEQEQLRQECLHLQSRLDAVQSECQREREEKLLLRDQLWQSGSELQQQADFCSAVGSAACSLLWSCSSREDSVTAWLAHGKLQSFLIVASQTLESFVKSLDDDMKTLTEDPNSSEHQFVLALVGTITNIAAVACGRDFLSSSGHVLLDALMKLLELMKPGVFPSLKVLSLMALYNVSISVKGLQYMSENKGLVPLIWTLLDDGHWEVCHHCLRLLQSVLLEEEALLLLGSSLLNPDLRVRVSRLTSSVQPSLRAAALQTLEDLQALQQDQ
SIO_010081: LOC119429179
subclass of: SO_0000673
so part of: LOC119429179
location: join(540334..540387,541830..541920,542054..542169,544796..544945,556912..557056,557251..557368,557582..557685,557791..557990,558105..558113)
location: region:540334-558113:1
so has part: feature:540334-540387:1:exon
so has part: feature:541830-541920:1:exon
so has part: feature:542054-542169:1:exon
so has part: feature:544796-544945:1:exon
so has part: feature:556912-557056:1:exon
so has part: feature:557251-557368:1:exon
so has part: feature:557582-557685:1:exon
so has part: feature:557791-557990:1:exon
so has part: feature:558105-558113:1:exon

XP_037552786.1
type: Protein
SIO_000068: ncbiprotein

position:540334:1
position: 540334
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:540334-540387:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:541830-541920:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:542054-542169:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:544796-544945:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:556912-557056:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:557251-557368:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:557582-557685:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:557791-557990:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:558105-558113:1:exon

cryaa
type: Gene
subclass of: SO_0000704
RO_0002162: 451745
gene: cryaa
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(562369..564349)
location: region:562369-564349:-1
so has part: feature:562369-564349:-1:exon
subclass of: SO_0000010

119429149
type: Gene
SIO_000068: ncbigene

position:562369:-1
position: 562369
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:564349:-1
position: 564349
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:562369-564349:-1:exon

cryaa
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 451745
gene: cryaa
product: crystallin, alpha A
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 25 Proteins, and 95% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_037696832.1
SIO_010081: cryaa
subclass of: SO_0000673
so part of: cryaa
location: complement(join(562369..562900,563683..563805,563987..564349))
location: region:562369-564349:-1
so has part: feature:563987-564349:-1:exon
so has part: feature:563683-563805:-1:exon
so has part: feature:562369-562900:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:563987-564349:-1:exon

position:563987:-1
position: 563987
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:563683-563805:-1:exon

position:563683:-1
position: 563683
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:563805:-1
position: 563805
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:562369-562900:-1:exon

position:562900:-1
position: 562900
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

cryaa
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 451745
gene: cryaa
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: alpha-crystallin A chain
translation: MDIAIQHPWFRRALGPIHPARLFDQFFGEGIYDYDFFPYTSSTISPFYRHSLFRNFLDSSNSGVSEVRSDRDKFTVYLDVKHFSPDELSVKVTDDYVEIQGKHGERQDDHGYISRGFHRRYRLPSNVDQSSVTCTLSADGLLTLTGPKVSGGSESGRSIPITRDDKPNAAPSS
SIO_010081: cryaa
subclass of: SO_0000673
so part of: cryaa
location: complement(join(562700..562900,563683..563805,563987..564184))
location: region:562700-564184:-1
so has part: feature:563987-564184:-1:exon
so has part: feature:563683-563805:-1:exon
so has part: feature:562700-562900:-1:exon

XP_037552760.1
type: Protein
SIO_000068: ncbiprotein

position:562700:-1
position: 562700
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:564184:-1
position: 564184
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:563987-564184:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:563683-563805:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:562700-562900:-1:exon

chrm4a
type: Gene
subclass of: SO_0000704
RO_0002162: 451745
gene: chrm4a
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(691132..782194)
location: region:691132-782194:-1
so has part: feature:691132-782194:-1:exon
subclass of: SO_0000010

119429180
type: Gene
SIO_000068: ncbigene

position:691132:-1
position: 691132
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:782194:-1
position: 782194
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:691132-782194:-1:exon

chrm4a
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 451745
gene: chrm4a
product: cholinergic receptor, muscarinic 4a
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 43% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_037696859.1
SIO_010081: chrm4a
subclass of: SO_0000673
so part of: chrm4a
location: complement(join(691132..691377,703424..703693,733252..733332,747393..747594,747722..747876,769807..770405,781927..782194))
location: region:691132-782194:-1
so has part: feature:781927-782194:-1:exon
so has part: feature:769807-770405:-1:exon
so has part: feature:747722-747876:-1:exon
so has part: feature:747393-747594:-1:exon
so has part: feature:733252-733332:-1:exon
so has part: feature:703424-703693:-1:exon
so has part: feature:691132-691377:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:781927-782194:-1:exon

position:781927:-1
position: 781927
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:769807-770405:-1:exon

position:769807:-1
position: 769807
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:770405:-1
position: 770405
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:747722-747876:-1:exon

position:747722:-1
position: 747722
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:747876:-1
position: 747876
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:747393-747594:-1:exon

position:747393:-1
position: 747393
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:747594:-1
position: 747594
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:733252-733332:-1:exon

position:733252:-1
position: 733252
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:733332:-1
position: 733332
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:703424-703693:-1:exon

position:703424:-1
position: 703424
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:703693:-1
position: 703693
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:691132-691377:-1:exon

position:691377:-1
position: 691377
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

chrm4a
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 451745
gene: chrm4a
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: muscarinic acetylcholine receptor M4
translation: MRQGTRKAAWEPSIPRPWSRQAARRPFICGLQGRPPVVTWTQASEDLFVWTRGEDLFGWARSRDICRQARSEDPSRRAGSEDPSRRQDRSSFGNQSAELFSNISCNESSNTSSSCSLGDDEEQSANPYKTLEMFFIALVTGSLSFVTVTGNILVMLSIKVNRHLQTVNNYFLFSLACADLIIGVFSMNLYTVYIIVGYWPLGPVVCDLWLALDYVVSNASVMNLLIISFDRYFCVTKPLTYPTRRTTKMAGLMIAAAWILSFILWAPAILFWQFIVGQRTVPPGECYIQFLSNPAVTFGTAIAAFYLPVVIMTVLYINISLASRSRVSKHKPEKKDKKGVKTPGLIKSTLIKQNNNNETSPQASPRSTPKCSLDSTTTALESVKNGQVEEPQPGHPEPTVHPSPRLTQEEKESSNDSSTAFLPPTEPRTSQVTAQAENIPSPVVTTTANSAGPKINPTSRWSKIKIVTKQAGDECITAIEIVPPVEGAERRSIPISRPRTVARKFASIARSQVKRKRQMAAREKKVTKTIFAILLAFIITWTPYNVMVLISTFCQSCVPDTVWAIGYWLCYVNSTINPACYALCNATFKKTFKNLLLCQYKNIGTR
SIO_010081: chrm4a
subclass of: SO_0000673
so part of: chrm4a
location: complement(join(691132..691377,703424..703693,733252..733332,747393..747594,747722..747876,769807..770405,781927..782194))
location: region:691132-782194:-1
so has part: feature:781927-782194:-1:exon
so has part: feature:769807-770405:-1:exon
so has part: feature:747722-747876:-1:exon
so has part: feature:747393-747594:-1:exon
so has part: feature:733252-733332:-1:exon
so has part: feature:703424-703693:-1:exon
so has part: feature:691132-691377:-1:exon

XP_037552787.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:781927-782194:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:769807-770405:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:747722-747876:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:747393-747594:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:733252-733332:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:703424-703693:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:691132-691377:-1:exon

trnak-cuu
type: Gene
subclass of: SO_0000704
RO_0002162: 451745
gene: trnak-cuu
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
so part of: sequence
location: 769124..769196
location: region:769124-769196:1
so has part: feature:769124-769196:1:exon
subclass of: SO_0000663

119429185
type: Gene
SIO_000068: ncbigene

position:769124:1
position: 769124
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:769196:1
position: 769196
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:769124-769196:1:exon

trnak-cuu
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 451745
gene: trnak-cuu
product: tRNA-Lys
inference: COORDINATES: profile:tRNAscan-SE:2.0.4
note: transfer RNA lysine (anticodon CUU); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:769157..769159,aa:Lys,seq:ctt)
SIO_010081: trnak-cuu
subclass of: SO_0000673
so part of: trnak-cuu
location: 769124..769196
location: region:769124-769196:1
so has part: feature:769124-769196:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:769124-769196:1:exon

LOC119429169
type: Gene
subclass of: SO_0000704
RO_0002162: 451745
gene: LOC119429169
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(810199..871141)
location: region:810199-871141:-1
so has part: feature:810199-871141:-1:exon
subclass of: SO_0000010

119429169
type: Gene
SIO_000068: ncbigene

position:810199:-1
position: 810199
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:871141:-1
position: 871141
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:810199-871141:-1:exon

LOC119429169
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 451745
gene: LOC119429169
product: protein SON, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_037696850.1
SIO_010081: LOC119429169
subclass of: SO_0000673
so part of: LOC119429169
location: complement(join(810199..810435,818972..819073,825126..825241,830965..831033,831126..831273,839177..839293,844195..844305,851901..852116,852289..852375,852662..852799,855159..855334,855422..855574,861020..861213,861301..861580,861695..861891,863793..863959,864763..864971,869213..869244,871023..871141))
location: region:810199-871141:-1
so has part: feature:871023-871141:-1:exon
so has part: feature:869213-869244:-1:exon
so has part: feature:864763-864971:-1:exon
so has part: feature:863793-863959:-1:exon
so has part: feature:861695-861891:-1:exon
so has part: feature:861301-861580:-1:exon
so has part: feature:861020-861213:-1:exon
so has part: feature:855422-855574:-1:exon
so has part: feature:855159-855334:-1:exon
so has part: feature:852662-852799:-1:exon
so has part: feature:852289-852375:-1:exon
so has part: feature:851901-852116:-1:exon
so has part: feature:844195-844305:-1:exon
so has part: feature:839177-839293:-1:exon
so has part: feature:831126-831273:-1:exon
so has part: feature:830965-831033:-1:exon
so has part: feature:825126-825241:-1:exon
so has part: feature:818972-819073:-1:exon
so has part: feature:810199-810435:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:871023-871141:-1:exon

position:871023:-1
position: 871023
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:869213-869244:-1:exon

position:869213:-1
position: 869213
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:869244:-1
position: 869244
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:864763-864971:-1:exon

position:864763:-1
position: 864763
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:864971:-1
position: 864971
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:863793-863959:-1:exon

position:863793:-1
position: 863793
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:863959:-1
position: 863959
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:861695-861891:-1:exon

position:861695:-1
position: 861695
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:861891:-1
position: 861891
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:861301-861580:-1:exon

position:861301:-1
position: 861301
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:861580:-1
position: 861580
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:861020-861213:-1:exon

position:861020:-1
position: 861020
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:861213:-1
position: 861213
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:855422-855574:-1:exon

position:855422:-1
position: 855422
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:855574:-1
position: 855574
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:855159-855334:-1:exon

position:855159:-1
position: 855159
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:855334:-1
position: 855334
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:852662-852799:-1:exon

position:852662:-1
position: 852662
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:852799:-1
position: 852799
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:852289-852375:-1:exon

position:852289:-1
position: 852289
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:852375:-1
position: 852375
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:851901-852116:-1:exon

position:851901:-1
position: 851901
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:852116:-1
position: 852116
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:844195-844305:-1:exon

position:844195:-1
position: 844195
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:844305:-1
position: 844305
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:839177-839293:-1:exon

position:839177:-1
position: 839177
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:839293:-1
position: 839293
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:831126-831273:-1:exon

position:831126:-1
position: 831126
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:831273:-1
position: 831273
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:830965-831033:-1:exon

position:830965:-1
position: 830965
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:831033:-1
position: 831033
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:825126-825241:-1:exon

position:825126:-1
position: 825126
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:825241:-1
position: 825241
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:818972-819073:-1:exon

position:818972:-1
position: 818972
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:819073:-1
position: 819073
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:810199-810435:-1:exon

position:810435:-1
position: 810435
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC119429169
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 451745
gene: LOC119429169
product: protein SON, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_037696849.1
SIO_010081: LOC119429169
subclass of: SO_0000673
so part of: LOC119429169
location: complement(join(810199..810435,818972..819073,825126..825241,830965..831033,831126..831273,839177..839293,844195..844305,851901..852116,852289..852375,852662..852799,855159..855334,855422..855574,861020..861213,861301..861580,861695..861891,863793..863959,864763..864971,869213..869244,870566..870745,871023..871141))
location: region:810199-871141:-1
so has part: feature:871023-871141:-1:exon
so has part: feature:870566-870745:-1:exon
so has part: feature:869213-869244:-1:exon
so has part: feature:864763-864971:-1:exon
so has part: feature:863793-863959:-1:exon
so has part: feature:861695-861891:-1:exon
so has part: feature:861301-861580:-1:exon
so has part: feature:861020-861213:-1:exon
so has part: feature:855422-855574:-1:exon
so has part: feature:855159-855334:-1:exon
so has part: feature:852662-852799:-1:exon
so has part: feature:852289-852375:-1:exon
so has part: feature:851901-852116:-1:exon
so has part: feature:844195-844305:-1:exon
so has part: feature:839177-839293:-1:exon
so has part: feature:831126-831273:-1:exon
so has part: feature:830965-831033:-1:exon
so has part: feature:825126-825241:-1:exon
so has part: feature:818972-819073:-1:exon
so has part: feature:810199-810435:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:871023-871141:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:870566-870745:-1:exon

position:870566:-1
position: 870566
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:870745:-1
position: 870745
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:869213-869244:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:864763-864971:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:863793-863959:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:861695-861891:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:861301-861580:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:861020-861213:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:855422-855574:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:855159-855334:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:852662-852799:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:852289-852375:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:851901-852116:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:844195-844305:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:839177-839293:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:831126-831273:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:830965-831033:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:825126-825241:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:818972-819073:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:810199-810435:-1:exon

LOC119429169
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 451745
gene: LOC119429169
product: protein SON, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_037696848.1
SIO_010081: LOC119429169
subclass of: SO_0000673
so part of: LOC119429169
location: complement(join(810199..810435,818972..819073,825126..825241,830965..831033,831126..831273,839177..839293,844195..844305,851901..852116,852289..852375,852662..852799,855159..855334,855422..855574,861020..861213,861301..861580,861695..861891,863793..863959,864763..864971,869213..869244,870527..870745,871023..871141))
location: region:810199-871141:-1
so has part: feature:871023-871141:-1:exon
so has part: feature:870527-870745:-1:exon
so has part: feature:869213-869244:-1:exon
so has part: feature:864763-864971:-1:exon
so has part: feature:863793-863959:-1:exon
so has part: feature:861695-861891:-1:exon
so has part: feature:861301-861580:-1:exon
so has part: feature:861020-861213:-1:exon
so has part: feature:855422-855574:-1:exon
so has part: feature:855159-855334:-1:exon
so has part: feature:852662-852799:-1:exon
so has part: feature:852289-852375:-1:exon
so has part: feature:851901-852116:-1:exon
so has part: feature:844195-844305:-1:exon
so has part: feature:839177-839293:-1:exon
so has part: feature:831126-831273:-1:exon
so has part: feature:830965-831033:-1:exon
so has part: feature:825126-825241:-1:exon
so has part: feature:818972-819073:-1:exon
so has part: feature:810199-810435:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:871023-871141:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:870527-870745:-1:exon

position:870527:-1
position: 870527
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:869213-869244:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:864763-864971:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:863793-863959:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:861695-861891:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:861301-861580:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:861020-861213:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:855422-855574:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:855159-855334:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:852662-852799:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:852289-852375:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:851901-852116:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:844195-844305:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:839177-839293:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:831126-831273:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:830965-831033:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:825126-825241:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:818972-819073:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:810199-810435:-1:exon

LOC119429169
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 451745
gene: LOC119429169
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein SON isoform X3
translation: MAANLEQIFQDFILQKIREIEDQKEETTRRTPSEKEEQGEDHESKSRCHKEHSSKKKKKKKKKKKKKRRKSGENSSDSDSEVVSKQRIDRRDQSLRRREELPDIIPKQDSSNKDNASEKRHDRTSPCSFSKSCSEQRNSPSASEPFHRRSGSQIPCSPHRDISSSSLKREDLDHSMWSNQCPSQDLQPPLLSSSSTQTQIQTGEMSGSRTTELQEPVSADIKEGPSEPQGYGSSQSALNQPNTVEPEPSSEPNTSERKASDRTRSRDKSPSGRKMRLSKSPQRSKDQKSSKREKRSKFPHRSYRRRSRSRSRSRSVRKRSRSRSRVRRTRRSRSRSVSRSRRRAAYSQRDRWKREPSHSPVLILRKKRTPPRKDRSRSGSPHRISELDKEQLLEIAKANAAAMCVKAGMPVPASLQSTVLPLALPSMAMNAAMASMTAASVTAALSNMGTLSSLLHLPSISNKPPPVCVQNNSSALEEVKKKVAKQANSISIKEFTDKCKMIVDSTGELPVALPHVSDDEDDGKVFGGAAAIREQKVISFNITNSTARPSGRCDAEMAKEFPVSSGSQHRKKEGDGLGAYGEWVPVEKTTVKVSTGPKKSSVPTVTSSLIPPEDTAVSLGLPDVIEQPTPAPDKDSVFPETQLQPVDISQAVTERIKAQRRLAENPYDISAMCMLSRAQEQVDAWAQSSNVPGLFTGSTGAQVLSSEELSTSGPQAWLKKDQFLKAAPVSGGVGEFLMRKMGWRTGEGLGRNREGTVEPIVIDFKVDRKGLVAEGEKPQKQTGGLVVTKDLMGKHPVSALIELCNKKRIMQPDFVMVHHSGPDHRKNFLFKVTVSGVDYQPQTPSPNKKHAKAMAATVALQALGEVPADGPGLYTGPVFTAASTGPLFST
SIO_010081: LOC119429169
subclass of: SO_0000673
so part of: LOC119429169
location: complement(join(810358..810435,818972..819073,825126..825241,830965..831033,831126..831273,839177..839293,844195..844305,851901..852116,852289..852375,852662..852799,855159..855334,855422..855574,861020..861213,861301..861580,861695..861891,863793..863959,864763..864971,869213..869244,871023..871105))
location: region:810358-871105:-1
so has part: feature:871023-871105:-1:exon
so has part: feature:869213-869244:-1:exon
so has part: feature:864763-864971:-1:exon
so has part: feature:863793-863959:-1:exon
so has part: feature:861695-861891:-1:exon
so has part: feature:861301-861580:-1:exon
so has part: feature:861020-861213:-1:exon
so has part: feature:855422-855574:-1:exon
so has part: feature:855159-855334:-1:exon
so has part: feature:852662-852799:-1:exon
so has part: feature:852289-852375:-1:exon
so has part: feature:851901-852116:-1:exon
so has part: feature:844195-844305:-1:exon
so has part: feature:839177-839293:-1:exon
so has part: feature:831126-831273:-1:exon
so has part: feature:830965-831033:-1:exon
so has part: feature:825126-825241:-1:exon
so has part: feature:818972-819073:-1:exon
so has part: feature:810358-810435:-1:exon

XP_037552778.1
type: Protein
SIO_000068: ncbiprotein

position:810358:-1
position: 810358
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:871105:-1
position: 871105
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:871023-871105:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:869213-869244:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:864763-864971:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:863793-863959:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:861695-861891:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:861301-861580:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:861020-861213:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:855422-855574:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:855159-855334:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:852662-852799:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:852289-852375:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:851901-852116:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:844195-844305:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:839177-839293:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:831126-831273:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:830965-831033:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:825126-825241:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:818972-819073:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:810358-810435:-1:exon

LOC119429169
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 451745
gene: LOC119429169
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein SON isoform X2
translation: MAANLEQIFQDFILQKIREIEDQKEETTCAAPDVRPDQKDEQDTVRDSSSQRRHKGHKRQKKRRRRRSREQESSSDPGSGLGSDLRQRRRTPSEKEEQGEDHESKSRCHKEHSSKKKKKKKKKKKKKRRKSGENSSDSDSEVVSKQRIDRRDQSLRRREELPDIIPKQDSSNKDNASEKRHDRTSPCSFSKSCSEQRNSPSASEPFHRRSGSQIPCSPHRDISSSSLKREDLDHSMWSNQCPSQDLQPPLLSSSSTQTQIQTGEMSGSRTTELQEPVSADIKEGPSEPQGYGSSQSALNQPNTVEPEPSSEPNTSERKASDRTRSRDKSPSGRKMRLSKSPQRSKDQKSSKREKRSKFPHRSYRRRSRSRSRSRSVRKRSRSRSRVRRTRRSRSRSVSRSRRRAAYSQRDRWKREPSHSPVLILRKKRTPPRKDRSRSGSPHRISELDKEQLLEIAKANAAAMCVKAGMPVPASLQSTVLPLALPSMAMNAAMASMTAASVTAALSNMGTLSSLLHLPSISNKPPPVCVQNNSSALEEVKKKVAKQANSISIKEFTDKCKMIVDSTGELPVALPHVSDDEDDGKVFGGAAAIREQKVISFNITNSTARPSGRCDAEMAKEFPVSSGSQHRKKEGDGLGAYGEWVPVEKTTVKVSTGPKKSSVPTVTSSLIPPEDTAVSLGLPDVIEQPTPAPDKDSVFPETQLQPVDISQAVTERIKAQRRLAENPYDISAMCMLSRAQEQVDAWAQSSNVPGLFTGSTGAQVLSSEELSTSGPQAWLKKDQFLKAAPVSGGVGEFLMRKMGWRTGEGLGRNREGTVEPIVIDFKVDRKGLVAEGEKPQKQTGGLVVTKDLMGKHPVSALIELCNKKRIMQPDFVMVHHSGPDHRKNFLFKVTVSGVDYQPQTPSPNKKHAKAMAATVALQALGEVPADGPGLYTGPVFTAASTGPLFST
SIO_010081: LOC119429169
subclass of: SO_0000673
so part of: LOC119429169
location: complement(join(810358..810435,818972..819073,825126..825241,830965..831033,831126..831273,839177..839293,844195..844305,851901..852116,852289..852375,852662..852799,855159..855334,855422..855574,861020..861213,861301..861580,861695..861891,863793..863959,864763..864971,869213..869244,870566..870745,871023..871105))
location: region:810358-871105:-1
so has part: feature:871023-871105:-1:exon
so has part: feature:870566-870745:-1:exon
so has part: feature:869213-869244:-1:exon
so has part: feature:864763-864971:-1:exon
so has part: feature:863793-863959:-1:exon
so has part: feature:861695-861891:-1:exon
so has part: feature:861301-861580:-1:exon
so has part: feature:861020-861213:-1:exon
so has part: feature:855422-855574:-1:exon
so has part: feature:855159-855334:-1:exon
so has part: feature:852662-852799:-1:exon
so has part: feature:852289-852375:-1:exon
so has part: feature:851901-852116:-1:exon
so has part: feature:844195-844305:-1:exon
so has part: feature:839177-839293:-1:exon
so has part: feature:831126-831273:-1:exon
so has part: feature:830965-831033:-1:exon
so has part: feature:825126-825241:-1:exon
so has part: feature:818972-819073:-1:exon
so has part: feature:810358-810435:-1:exon

XP_037552777.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:871023-871105:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:870566-870745:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:869213-869244:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:864763-864971:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:863793-863959:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:861695-861891:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:861301-861580:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:861020-861213:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:855422-855574:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:855159-855334:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:852662-852799:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:852289-852375:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:851901-852116:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:844195-844305:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:839177-839293:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:831126-831273:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:830965-831033:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:825126-825241:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:818972-819073:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:810358-810435:-1:exon

LOC119429169
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 451745
gene: LOC119429169
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein SON isoform X1
translation: MAANLEQIFQDFILQKIREIEDQKEETTCAAPDVRPDQKDEQDTVRDSSSQRRHKGHKRQKKRRRRRSREQESSSDPGSGLGSDLRQRSRLLNTSVLQLDRRRTPSEKEEQGEDHESKSRCHKEHSSKKKKKKKKKKKKKRRKSGENSSDSDSEVVSKQRIDRRDQSLRRREELPDIIPKQDSSNKDNASEKRHDRTSPCSFSKSCSEQRNSPSASEPFHRRSGSQIPCSPHRDISSSSLKREDLDHSMWSNQCPSQDLQPPLLSSSSTQTQIQTGEMSGSRTTELQEPVSADIKEGPSEPQGYGSSQSALNQPNTVEPEPSSEPNTSERKASDRTRSRDKSPSGRKMRLSKSPQRSKDQKSSKREKRSKFPHRSYRRRSRSRSRSRSVRKRSRSRSRVRRTRRSRSRSVSRSRRRAAYSQRDRWKREPSHSPVLILRKKRTPPRKDRSRSGSPHRISELDKEQLLEIAKANAAAMCVKAGMPVPASLQSTVLPLALPSMAMNAAMASMTAASVTAALSNMGTLSSLLHLPSISNKPPPVCVQNNSSALEEVKKKVAKQANSISIKEFTDKCKMIVDSTGELPVALPHVSDDEDDGKVFGGAAAIREQKVISFNITNSTARPSGRCDAEMAKEFPVSSGSQHRKKEGDGLGAYGEWVPVEKTTVKVSTGPKKSSVPTVTSSLIPPEDTAVSLGLPDVIEQPTPAPDKDSVFPETQLQPVDISQAVTERIKAQRRLAENPYDISAMCMLSRAQEQVDAWAQSSNVPGLFTGSTGAQVLSSEELSTSGPQAWLKKDQFLKAAPVSGGVGEFLMRKMGWRTGEGLGRNREGTVEPIVIDFKVDRKGLVAEGEKPQKQTGGLVVTKDLMGKHPVSALIELCNKKRIMQPDFVMVHHSGPDHRKNFLFKVTVSGVDYQPQTPSPNKKHAKAMAATVALQALGEVPADGPGLYTGPVFTAASTGPLFST
SIO_010081: LOC119429169
subclass of: SO_0000673
so part of: LOC119429169
location: complement(join(810358..810435,818972..819073,825126..825241,830965..831033,831126..831273,839177..839293,844195..844305,851901..852116,852289..852375,852662..852799,855159..855334,855422..855574,861020..861213,861301..861580,861695..861891,863793..863959,864763..864971,869213..869244,870527..870745,871023..871105))
location: region:810358-871105:-1
so has part: feature:871023-871105:-1:exon
so has part: feature:870527-870745:-1:exon
so has part: feature:869213-869244:-1:exon
so has part: feature:864763-864971:-1:exon
so has part: feature:863793-863959:-1:exon
so has part: feature:861695-861891:-1:exon
so has part: feature:861301-861580:-1:exon
so has part: feature:861020-861213:-1:exon
so has part: feature:855422-855574:-1:exon
so has part: feature:855159-855334:-1:exon
so has part: feature:852662-852799:-1:exon
so has part: feature:852289-852375:-1:exon
so has part: feature:851901-852116:-1:exon
so has part: feature:844195-844305:-1:exon
so has part: feature:839177-839293:-1:exon
so has part: feature:831126-831273:-1:exon
so has part: feature:830965-831033:-1:exon
so has part: feature:825126-825241:-1:exon
so has part: feature:818972-819073:-1:exon
so has part: feature:810358-810435:-1:exon

XP_037552776.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:871023-871105:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:870527-870745:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:869213-869244:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:864763-864971:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:863793-863959:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:861695-861891:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:861301-861580:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:861020-861213:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:855422-855574:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:855159-855334:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:852662-852799:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:852289-852375:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:851901-852116:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:844195-844305:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:839177-839293:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:831126-831273:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:830965-831033:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:825126-825241:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:818972-819073:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:810358-810435:-1:exon

hecw2b
type: Gene
subclass of: SO_0000704
RO_0002162: 451745
gene: hecw2b
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(879034..>926850)
location: region:879034-926850:-1
so has part: feature:879034-926850:-1:exon
subclass of: SO_0000010

119429160
type: Gene
SIO_000068: ncbigene

position:879034:-1
position: 879034
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:926850:-1
position: 926850
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:879034-926850:-1:exon

hecw2b
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 451745
gene: hecw2b
product: HECT, C2 and WW domain containing E3 ubiquitin protein ligase 2b
inference: similar to RNA sequence (same species):INSD:GELZ01028985.1
exception: annotated by transcript or proteomic data
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: added 107 bases not found in genome assembly; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 15 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_037696838.1
SIO_010081: hecw2b
subclass of: SO_0000673
so part of: hecw2b
location: complement(join(879034..879309,881526..881638,881722..881807,882183..882297,882389..882535,883475..883604,883706..883804,883939..884091,886435..886548,886628..886748,889379..889488,892078..892161,892333..892429,892553..892655,892740..892892,892966..893151,893672..893796,898033..898136,899740..899890,900297..900398,904880..905021,905122..905936,908081..908181,911927..912069,917479..917648,917719..917794,921092..921186,922777..922884,925912..>926850))
location: region:879034-926850:-1
so has part: feature:925912-926850:-1:exon
so has part: feature:922777-922884:-1:exon
so has part: feature:921092-921186:-1:exon
so has part: feature:917719-917794:-1:exon
so has part: feature:917479-917648:-1:exon
so has part: feature:911927-912069:-1:exon
so has part: feature:908081-908181:-1:exon
so has part: feature:905122-905936:-1:exon
so has part: feature:904880-905021:-1:exon
so has part: feature:900297-900398:-1:exon
so has part: feature:899740-899890:-1:exon
so has part: feature:898033-898136:-1:exon
so has part: feature:893672-893796:-1:exon
so has part: feature:892966-893151:-1:exon
so has part: feature:892740-892892:-1:exon
so has part: feature:892553-892655:-1:exon
so has part: feature:892333-892429:-1:exon
so has part: feature:892078-892161:-1:exon
so has part: feature:889379-889488:-1:exon
so has part: feature:886628-886748:-1:exon
so has part: feature:886435-886548:-1:exon
so has part: feature:883939-884091:-1:exon
so has part: feature:883706-883804:-1:exon
so has part: feature:883475-883604:-1:exon
so has part: feature:882389-882535:-1:exon
so has part: feature:882183-882297:-1:exon
so has part: feature:881722-881807:-1:exon
so has part: feature:881526-881638:-1:exon
so has part: feature:879034-879309:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:925912-926850:-1:exon

position:925912:-1
position: 925912
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:922777-922884:-1:exon

position:922777:-1
position: 922777
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:922884:-1
position: 922884
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:921092-921186:-1:exon

position:921092:-1
position: 921092
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:921186:-1
position: 921186
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:917719-917794:-1:exon

position:917719:-1
position: 917719
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:917794:-1
position: 917794
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:917479-917648:-1:exon

position:917479:-1
position: 917479
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:917648:-1
position: 917648
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:911927-912069:-1:exon

position:911927:-1
position: 911927
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:912069:-1
position: 912069
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:908081-908181:-1:exon

position:908081:-1
position: 908081
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:908181:-1
position: 908181
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:905122-905936:-1:exon

position:905122:-1
position: 905122
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:905936:-1
position: 905936
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:904880-905021:-1:exon

position:904880:-1
position: 904880
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:905021:-1
position: 905021
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:900297-900398:-1:exon

position:900297:-1
position: 900297
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:900398:-1
position: 900398
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:899740-899890:-1:exon

position:899740:-1
position: 899740
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:899890:-1
position: 899890
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:898033-898136:-1:exon

position:898033:-1
position: 898033
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:898136:-1
position: 898136
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:893672-893796:-1:exon

position:893672:-1
position: 893672
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:893796:-1
position: 893796
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:892966-893151:-1:exon

position:892966:-1
position: 892966
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:893151:-1
position: 893151
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:892740-892892:-1:exon

position:892740:-1
position: 892740
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:892892:-1
position: 892892
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:892553-892655:-1:exon

position:892553:-1
position: 892553
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:892655:-1
position: 892655
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:892333-892429:-1:exon

position:892333:-1
position: 892333
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:892429:-1
position: 892429
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:892078-892161:-1:exon

position:892078:-1
position: 892078
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:892161:-1
position: 892161
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:889379-889488:-1:exon

position:889379:-1
position: 889379
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:889488:-1
position: 889488
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:886628-886748:-1:exon

position:886628:-1
position: 886628
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:886748:-1
position: 886748
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:886435-886548:-1:exon

position:886435:-1
position: 886435
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:886548:-1
position: 886548
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:883939-884091:-1:exon

position:883939:-1
position: 883939
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:884091:-1
position: 884091
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:883706-883804:-1:exon

position:883706:-1
position: 883706
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:883804:-1
position: 883804
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:883475-883604:-1:exon

position:883475:-1
position: 883475
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:883604:-1
position: 883604
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:882389-882535:-1:exon

position:882389:-1
position: 882389
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:882535:-1
position: 882535
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 26
SIO_000628: feature:882183-882297:-1:exon

position:882183:-1
position: 882183
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:882297:-1
position: 882297
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 27
SIO_000628: feature:881722-881807:-1:exon

position:881722:-1
position: 881722
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:881807:-1
position: 881807
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 28
SIO_000628: feature:881526-881638:-1:exon

position:881526:-1
position: 881526
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:881638:-1
position: 881638
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 29
SIO_000628: feature:879034-879309:-1:exon

position:879309:-1
position: 879309
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

hecw2b
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 451745
gene: hecw2b
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: E3 ubiquitin-protein ligase HECW2
translation: MAAAATASSSSPPMSSTSNGSAREHLLAVRRRTPQARPYTVGPDSLSSLSGHDADEASALSALSGAQTESAGVGLQRANSDTDLVSSESRSSLTASMYQLTLGHGHLVISWDIKEEVDATDWIGLYHIDETCVANVWESKNRGINGTQRGQILWRLEPEPYFMEPETKICFKYYHGVTGALRAMTPCITVKNTQIPVRSEGQVEEQSENDHCRKLISFTLSDIRAVGLKKGMFFNPDPYLKMSIQPGKRSGLPKFTHHGQERRSSIIANTTNPVWHGEKYTFVALMTDVLEIEVKDKFAKSRPIIKRFLGQLIVPVQRLLEGSAVEHHLVSFSLGRRLPTDNVSGQLHFRVYITSTGHEEASPDAVGTILGSGDPGSPSDDEELPHPSSSSHVTCGPSPTGSEEGPFVMNGLCCYGDDSMWRDPGQLGVEDLRPVAPRGHTNRQVSLNDYLDALEAPACPGDRLPVGPLPKLRSSFPTDTRLNAMLHIDSDEEEDPVGQDRDQSQQSTDSLITSAVLGAGQRNHGGHKVQAGSGAEAASSTGSQPRTEQEQVEIGGGTHDGASVQTETSDQAAGVPAEEALVSEGTSTASGWSQAAAAASTEESGLEGSCQEQSSRTRTCNPPGGPLSPIQEIEARKELAPKAEEEGVETSSSEANGPVGASAQISSSTTDGEGSPKSGATAQVNGHQSVRSLPTLRHDISRYQRVDEPLPPNWEARIDSHGRIFYVDHVNRTTTWQRPTAPPAPQTLQRSSSIQQMEQLNRRYQSIRRTMTNDHRPEEQPANELLGDETDTNPTSPELRRDNSSTQSSSRSRISLLLQSPSARFLTSPDFFTVLHSNPSAHRMFTTNTCLKHMISKVRRDTHHFERYQHNRDLVSFLNMLANKQLELPRGWEMKHDHGGKPFFVDHNCRATTFIDPRLPLQSSRPPSLLAHHQHLTRQRSHSAGEVSPRRAASEDPRHPGPPVLPRPSSTFTSTNRGQYQEVVPVAYNDKIVAFLRQPNIFEILQERQSDFSRNHVLREKVQLIRTDGVSGLTRLSGDADLVILLSLFEDEVMSYVPPHALLHPTYCQSPRGSPGSSPQNSPGTQRANARAPAPYKRDFEAKLRNFYRKLETKGYGQGPGKLKLNIRRDHLLEDAFNQIMCYSRKDLQRSKFYVSFMGEEGLDYSGPSREFFFLVSRELFNPYYGLFEYSANDTYTVQISPMSAFVDNHHEWFRFSGRILGLALIHQYLLDAFFTRPFYKGLLRIPCDLSDLEYLDEEFHQSLQWMKDNDIEDMLDLTFTVNEEVFGQITERELKPGGGNIPVSEKNKKEYIERMVKWRIERGVVQQTESLVRGFYEVVDARLVSVFDARELELVIAGTAEIDLSDWRNNTEYRGGYHDNHIVIRWFWAAVERFNNEQRLRLLQFVTGTSSIPYEGFASLRGSNGPRRFCVEKWGKVTSLPRAHTCFNRLDLPPYQSFSMLYEKMLTAVEETSTFGLE
SIO_010081: hecw2b
subclass of: SO_0000673
so part of: hecw2b
location: complement(join(879198..879309,881526..881638,881722..881807,882183..882297,882389..882535,883475..883604,883706..883804,883939..884091,886435..886548,886628..886748,889379..889488,892078..892161,892333..892429,892553..892655,892740..892892,892966..893151,893672..893796,898033..898136,899740..899890,900297..900398,904880..905021,905122..905936,908081..908181,911927..912069,917479..917648,917719..917794,921092..921186,922777..922884,925912..926296))
location: region:879198-926296:-1
so has part: feature:925912-926296:-1:exon
so has part: feature:922777-922884:-1:exon
so has part: feature:921092-921186:-1:exon
so has part: feature:917719-917794:-1:exon
so has part: feature:917479-917648:-1:exon
so has part: feature:911927-912069:-1:exon
so has part: feature:908081-908181:-1:exon
so has part: feature:905122-905936:-1:exon
so has part: feature:904880-905021:-1:exon
so has part: feature:900297-900398:-1:exon
so has part: feature:899740-899890:-1:exon
so has part: feature:898033-898136:-1:exon
so has part: feature:893672-893796:-1:exon
so has part: feature:892966-893151:-1:exon
so has part: feature:892740-892892:-1:exon
so has part: feature:892553-892655:-1:exon
so has part: feature:892333-892429:-1:exon
so has part: feature:892078-892161:-1:exon
so has part: feature:889379-889488:-1:exon
so has part: feature:886628-886748:-1:exon
so has part: feature:886435-886548:-1:exon
so has part: feature:883939-884091:-1:exon
so has part: feature:883706-883804:-1:exon
so has part: feature:883475-883604:-1:exon
so has part: feature:882389-882535:-1:exon
so has part: feature:882183-882297:-1:exon
so has part: feature:881722-881807:-1:exon
so has part: feature:881526-881638:-1:exon
so has part: feature:879198-879309:-1:exon

XP_037552766.1
type: Protein
SIO_000068: ncbiprotein

position:879198:-1
position: 879198
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:926296:-1
position: 926296
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:925912-926296:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:922777-922884:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:921092-921186:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:917719-917794:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:917479-917648:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:911927-912069:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:908081-908181:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:905122-905936:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:904880-905021:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:900297-900398:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:899740-899890:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:898033-898136:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:893672-893796:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:892966-893151:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:892740-892892:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:892553-892655:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:892333-892429:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:892078-892161:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:889379-889488:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:886628-886748:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:886435-886548:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:883939-884091:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:883706-883804:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:883475-883604:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:882389-882535:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:882183-882297:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:881722-881807:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:881526-881638:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:879198-879309:-1:exon

LOC119429161
type: Gene
subclass of: SO_0000704
RO_0002162: 451745
gene: LOC119429161
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(938805..>945969)
location: region:938805-945969:-1
so has part: feature:938805-945969:-1:exon
subclass of: SO_0000010

119429161
type: Gene
SIO_000068: ncbigene

position:938805:-1
position: 938805
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:945969:-1
position: 945969
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:938805-945969:-1:exon

LOC119429161
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 451745
gene: LOC119429161
product: general transcription factor 3C polypeptide 3
inference: similar to RNA sequence (same species):INSD:GELZ01005232.1
exception: annotated by transcript or proteomic data
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: added 223 bases not found in genome assembly; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 88% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_037696839.1
SIO_010081: LOC119429161
subclass of: SO_0000673
so part of: LOC119429161
location: complement(join(938805..939035,939112..939264,939336..939460,942831..942966,943061..943115,943181..943406,945651..945783,945868..>945969))
location: region:938805-945969:-1
so has part: feature:945868-945969:-1:exon
so has part: feature:945651-945783:-1:exon
so has part: feature:943181-943406:-1:exon
so has part: feature:943061-943115:-1:exon
so has part: feature:942831-942966:-1:exon
so has part: feature:939336-939460:-1:exon
so has part: feature:939112-939264:-1:exon
so has part: feature:938805-939035:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:945868-945969:-1:exon

position:945868:-1
position: 945868
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:945651-945783:-1:exon

position:945651:-1
position: 945651
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:945783:-1
position: 945783
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:943181-943406:-1:exon

position:943181:-1
position: 943181
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:943406:-1
position: 943406
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:943061-943115:-1:exon

position:943061:-1
position: 943061
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:943115:-1
position: 943115
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:942831-942966:-1:exon

position:942831:-1
position: 942831
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:942966:-1
position: 942966
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:939336-939460:-1:exon

position:939336:-1
position: 939336
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:939460:-1
position: 939460
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:939112-939264:-1:exon

position:939112:-1
position: 939112
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:939264:-1
position: 939264
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:938805-939035:-1:exon

position:939035:-1
position: 939035
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC119429161
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 451745
gene: LOC119429161
inference: similar to RNA sequence (same species):INSD:GELZ01005232.1
exception: annotated by transcript or proteomic data
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: added 180 bases not found in genome assembly; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: general transcription factor 3C polypeptide 3
translation: MKKAAASFSKVVEMAPQHLEARLSLATIQQQLGHMDLALKALESMYDSDTLAQDSSAAQKELKLLLHRSTLLKTQGWTQDYLDAVITMISMLLKVAMQRAKVCVKSVNLSGENHLRLHKVMDNLPEISDHETAYLDNTGKTSVLSKEDWWQLLVSCLLTMCEVKRYEEAELLVESAMEFYSFYDNKPKRKELEFLGLSATVLSHDYYRAYNYIRLMLLENVHLPQLWNIFNQLTMNSQHQRHHRFCLRMLLKHPDNIMLCVLCGHNAMVSGSFKHALGQYVQALKAHPTNPMHSLCVGLTFFHMASQKYAAKRHALLLQGFSFLWRYLELRGECQESLYNLGRALHQMGLTHLAIHYYQQALTRPAPTLDGIADDQVDLRREIAFNLSLIYQASGNMEMARQLIRTHCIV
SIO_010081: LOC119429161
subclass of: SO_0000673
so part of: LOC119429161
location: complement(join(938913..939035,939112..939264,939336..939460,942831..942966,943061..943115,943181..943406,945651..945783,945868..>945969))
location: region:938913-945969:-1
so has part: feature:945868-945969:-1:exon
so has part: feature:945651-945783:-1:exon
so has part: feature:943181-943406:-1:exon
so has part: feature:943061-943115:-1:exon
so has part: feature:942831-942966:-1:exon
so has part: feature:939336-939460:-1:exon
so has part: feature:939112-939264:-1:exon
so has part: feature:938913-939035:-1:exon

XP_037552767.1
type: Protein
SIO_000068: ncbiprotein

position:938913:-1
position: 938913
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:945868-945969:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:945651-945783:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:943181-943406:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:943061-943115:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:942831-942966:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:939336-939460:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:939112-939264:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:938913-939035:-1:exon

LOC119429181
type: Gene
subclass of: SO_0000704
RO_0002162: 451745
gene: LOC119429181
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(961489..983984)
location: region:961489-983984:-1
so has part: feature:961489-983984:-1:exon
subclass of: SO_0000010

119429181
type: Gene
SIO_000068: ncbigene

position:961489:-1
position: 961489
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:983984:-1
position: 983984
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:961489-983984:-1:exon

LOC119429181
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 451745
gene: LOC119429181
product: general transcription factor 3C polypeptide 3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 73% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_037696860.1
SIO_010081: LOC119429181
subclass of: SO_0000673
so part of: LOC119429181
location: complement(join(961489..961493,961625..961796,961869..961969,970337..970466,970549..970696,973876..974041,979739..979930,979999..980122,980184..980284,980423..980524,980820..980880,983772..983984))
location: region:961489-983984:-1
so has part: feature:983772-983984:-1:exon
so has part: feature:980820-980880:-1:exon
so has part: feature:980423-980524:-1:exon
so has part: feature:980184-980284:-1:exon
so has part: feature:979999-980122:-1:exon
so has part: feature:979739-979930:-1:exon
so has part: feature:973876-974041:-1:exon
so has part: feature:970549-970696:-1:exon
so has part: feature:970337-970466:-1:exon
so has part: feature:961869-961969:-1:exon
so has part: feature:961625-961796:-1:exon
so has part: feature:961489-961493:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:983772-983984:-1:exon

position:983772:-1
position: 983772
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:980820-980880:-1:exon

position:980820:-1
position: 980820
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:980880:-1
position: 980880
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:980423-980524:-1:exon

position:980423:-1
position: 980423
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:980524:-1
position: 980524
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:980184-980284:-1:exon

position:980184:-1
position: 980184
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:980284:-1
position: 980284
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:979999-980122:-1:exon

position:979999:-1
position: 979999
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:980122:-1
position: 980122
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:979739-979930:-1:exon

position:979739:-1
position: 979739
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:979930:-1
position: 979930
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:973876-974041:-1:exon

position:973876:-1
position: 973876
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:974041:-1
position: 974041
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:970549-970696:-1:exon

position:970549:-1
position: 970549
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:970696:-1
position: 970696
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:970337-970466:-1:exon

position:970337:-1
position: 970337
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:970466:-1
position: 970466
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:961869-961969:-1:exon

position:961869:-1
position: 961869
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:961969:-1
position: 961969
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:961625-961796:-1:exon

position:961625:-1
position: 961625
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:961796:-1
position: 961796
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:961489-961493:-1:exon

position:961493:-1
position: 961493
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC119429181
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 451745
gene: LOC119429181
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: general transcription factor 3C polypeptide 3
translation: MRITFSGQHRQFSIDKVHRLQSYRLQSYRLQSYRDMSGFSVELIDYLEGRITFEEFDRRRDERKAEEEAGPEEDAQPSTSTQTHVTIEEGVSPGVQLAFASILGESAEAPSSDEEEEEEEDSEEEEEEEEDEGMSVGDVFKLEMELNRENKKLMKARRHGSKLPQALRGLMGEANIRYARGEKEDAILMCMEIIRQAPLAYEPFSTLAMIYEDNEDVDKALQFGLIAAHLNPSDCEEWIRLADMSLEQDNVRQAIICYSKAIKYDPTNVRYLWERSSLHMRLGEHKQCMDGYRRILSLLPLEDGEQFMQLSKDMAKSYYESNDLTSALGVMEEALTRHPSLASDDIINMAAELYICSRQYKQALQVLVKFTGAVLVRAEPTPPVTASQTQMVTEEELKREEDSNSDEHGEIMEVHVPDGVPVDLRAKLVVCLIQLQVLTPVEGLVSSLMEQSPEEIGDLYLDVGEAYIEQGQYLSALPLLSALVISEKYNLAVVWLRHAV
SIO_010081: LOC119429181
subclass of: SO_0000673
so part of: LOC119429181
location: complement(join(961489..961493,961625..961796,961869..961969,970337..970466,970549..970696,973876..974041,979739..979930,979999..980122,980184..980284,980423..980524,980820..980880,983772..983972))
location: region:961489-983972:-1
so has part: feature:983772-983972:-1:exon
so has part: feature:980820-980880:-1:exon
so has part: feature:980423-980524:-1:exon
so has part: feature:980184-980284:-1:exon
so has part: feature:979999-980122:-1:exon
so has part: feature:979739-979930:-1:exon
so has part: feature:973876-974041:-1:exon
so has part: feature:970549-970696:-1:exon
so has part: feature:970337-970466:-1:exon
so has part: feature:961869-961969:-1:exon
so has part: feature:961625-961796:-1:exon
so has part: feature:961489-961493:-1:exon

XP_037552788.1
type: Protein
SIO_000068: ncbiprotein

position:983972:-1
position: 983972
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:983772-983972:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:980820-980880:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:980423-980524:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:980184-980284:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:979999-980122:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:979739-979930:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:973876-974041:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:970549-970696:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:970337-970466:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:961869-961969:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:961625-961796:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:961489-961493:-1:exon

LOC119429148
type: Gene
subclass of: SO_0000704
RO_0002162: 451745
gene: LOC119429148
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1170347..1202798
location: region:1170347-1202798:1
so has part: feature:1170347-1202798:1:exon
subclass of: SO_0000010

119429148
type: Gene
SIO_000068: ncbigene

position:1170347:1
position: 1170347
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1202798:1
position: 1202798
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1170347-1202798:1:exon

LOC119429148
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 451745
gene: LOC119429148
product: pseudouridine 5'-phosphatase, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 14 Proteins, and 81% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_037696830.1
SIO_010081: LOC119429148
subclass of: SO_0000673
so part of: LOC119429148
location: join(1170347..1170430,1171804..1172022,1175456..1175685,1202601..1202798)
location: region:1170347-1202798:1
so has part: feature:1170347-1170430:1:exon
so has part: feature:1171804-1172022:1:exon
so has part: feature:1175456-1175685:1:exon
so has part: feature:1202601-1202798:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1170347-1170430:1:exon

position:1170430:1
position: 1170430
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1171804-1172022:1:exon

position:1171804:1
position: 1171804
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1172022:1
position: 1172022
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1175456-1175685:1:exon

position:1175456:1
position: 1175456
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1175685:1
position: 1175685
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1202601-1202798:1:exon

position:1202601:1
position: 1202601
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC119429148
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 451745
gene: LOC119429148
product: pseudouridine 5'-phosphatase, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 76% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_037696831.1
SIO_010081: LOC119429148
subclass of: SO_0000673
so part of: LOC119429148
location: join(1170347..1170430,1171804..1171901,1175464..1175685,1202601..1202798)
location: region:1170347-1202798:1
so has part: feature:1170347-1170430:1:exon
so has part: feature:1171804-1171901:1:exon
so has part: feature:1175464-1175685:1:exon
so has part: feature:1202601-1202798:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1170347-1170430:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1171804-1171901:1:exon

position:1171901:1
position: 1171901
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1175464-1175685:1:exon

position:1175464:1
position: 1175464
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1202601-1202798:1:exon

LOC119429148
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 451745
gene: LOC119429148
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: pseudouridine-5'-phosphatase isoform X1
translation: MSASKNSYKPVSHVVFDMDGLLLDTERLYTVSFQEICDRFGKQYTWDVKSSVMGKKALDAAQIIRDALELPMSAEELLSESRTIQERIFPSAKLLPGVERLVHHLRKHRVPSAVATSSASQTFRQKTSTHKEFFAGFDHIVLGDDPEVKNGKPQPDSFLVCASRFKPPAPPQKCLVFEDAPNGVKAALAAGMQVVMVPDVNLDHSLTQSATLQLRSLEEFDPQLFGLPAYD
SIO_010081: LOC119429148
subclass of: SO_0000673
so part of: LOC119429148
location: join(1170361..1170430,1171804..1172022,1175456..1175685,1202601..1202777)
location: region:1170361-1202777:1
so has part: feature:1170361-1170430:1:exon
so has part: feature:1171804-1172022:1:exon
so has part: feature:1175456-1175685:1:exon
so has part: feature:1202601-1202777:1:exon

XP_037552758.1
type: Protein
SIO_000068: ncbiprotein

position:1170361:1
position: 1170361
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1202777:1
position: 1202777
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1170361-1170430:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1171804-1172022:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1175456-1175685:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1202601-1202777:1:exon

LOC119429148
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 451745
gene: LOC119429148
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: pseudouridine-5'-phosphatase isoform X2
translation: MSASKNSYKPVSHVVFDMDGLLLDTERLYTVSFQEICDRFGKQYTWDVKSSVMGKKRLVHHLRKHRVPSAVATSSASQTFRQKTSTHKEFFAGFDHIVLGDDPEVKNGKPQPDSFLVCASRFKPPAPPQKCLVFEDAPNGVKAALAAGMQVVMVPDVNLDHSLTQSATLQLRSLEEFDPQLFGLPAYD
SIO_010081: LOC119429148
subclass of: SO_0000673
so part of: LOC119429148
location: join(1170361..1170430,1171804..1171901,1175464..1175685,1202601..1202777)
location: region:1170361-1202777:1
so has part: feature:1170361-1170430:1:exon
so has part: feature:1171804-1171901:1:exon
so has part: feature:1175464-1175685:1:exon
so has part: feature:1202601-1202777:1:exon

XP_037552759.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1170361-1170430:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1171804-1171901:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1175464-1175685:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1202601-1202777:1:exon

nlgn4xa
type: Gene
subclass of: SO_0000704
RO_0002162: 451745
gene: nlgn4xa
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1269471..1325452
location: region:1269471-1325452:1
so has part: feature:1269471-1325452:1:exon
subclass of: SO_0000010

119429167
type: Gene
SIO_000068: ncbigene

position:1269471:1
position: 1269471
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1325452:1
position: 1325452
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1269471-1325452:1:exon

nlgn4xa
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 451745
gene: nlgn4xa
product: neuroligin 4 X-linked a
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 90% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_037696845.1
SIO_010081: nlgn4xa
subclass of: SO_0000673
so part of: nlgn4xa
location: join(1269471..1269591,1306693..1306878,1317289..1318078,1324329..1325452)
location: region:1269471-1325452:1
so has part: feature:1269471-1269591:1:exon
so has part: feature:1306693-1306878:1:exon
so has part: feature:1317289-1318078:1:exon
so has part: feature:1324329-1325452:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1269471-1269591:1:exon

position:1269591:1
position: 1269591
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1306693-1306878:1:exon

position:1306693:1
position: 1306693
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1306878:1
position: 1306878
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1317289-1318078:1:exon

position:1317289:1
position: 1317289
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1318078:1
position: 1318078
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1324329-1325452:1:exon

position:1324329:1
position: 1324329
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

nlgn4xa
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 451745
gene: nlgn4xa
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: neuroligin 4 X-linked a
translation: MVYVHGGSFVEGTGNMIDGSILASYGNVIVITINYRLGVLGFLSTGDQAAKGNYGLLDQIQALRWIKENIQAFKGDPKRVTIFGSGAGASCVSLLTLSHYSEDLFQKAIIQSGTALSSWAVNYQPAKYTRSLAEKVGCNMLDTMDLVECLQKKNYKELIEQYVTPAKYHIAFGPVIDGDVIPDDPQILMEQGEFLNYDIMLGVNQGEGFKFVDGIVDSEDGVSANDFDFAVSDFVDHLYGYPEGKDTLRETIKFMYTDWADKDNPETRRKTLVALFTDHQWVAPAVATADLHAQYGSPTYFYAFYHHCQSDMKPSWADSSHGDEIPYVFGIPMIGPTDLFNCNFSKNDVMLSAVVMTYWTNFAKTGDPNQPVPQDTKFIHTKPNRFEEVAWMKYNPKDQLYLHIGLKPRVRDHYRATKVAFWLELVPHIHDINGFFQYVSTTTKIPPQDTTPYPYTKRFPGKNNWPSTTRHPGIPSVNVKHTTDQRKSGDLTNESTVIIETRRDYSTELSVTIAVGASLLFLNILAFAALYYKKDKRRHESNRHVPSTPQRSSAPASTPSVANDVAHLQNEELLTLQMKQKKLEHEQPHECESLQSHDALRLACPPDYTLTLRRSPDDISLMTPSTITIIPNSLTGMQPLHNFNPFGGAQNSTNLPHGHSTTRV
SIO_010081: nlgn4xa
subclass of: SO_0000673
so part of: nlgn4xa
location: join(1269471..1269591,1306693..1306878,1317289..1318078,1324329..1325226)
location: region:1269471-1325226:1
so has part: feature:1269471-1269591:1:exon
so has part: feature:1306693-1306878:1:exon
so has part: feature:1317289-1318078:1:exon
so has part: feature:1324329-1325226:1:exon

XP_037552773.1
type: Protein
SIO_000068: ncbiprotein

position:1325226:1
position: 1325226
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1269471-1269591:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1306693-1306878:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1317289-1318078:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1324329-1325226:1:exon

LOC119429182
type: Gene
subclass of: SO_0000704
RO_0002162: 451745
gene: LOC119429182
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1471463..1487593
location: region:1471463-1487593:1
so has part: feature:1471463-1487593:1:exon
subclass of: SO_0000010

119429182
type: Gene
SIO_000068: ncbigene

position:1471463:1
position: 1471463
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1487593:1
position: 1487593
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1471463-1487593:1:exon

LOC119429182
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 451745
gene: LOC119429182
product: cAMP-dependent protein kinase catalytic subunit PRKX-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins
transcript id: XM_037696861.1
SIO_010081: LOC119429182
subclass of: SO_0000673
so part of: LOC119429182
location: join(1471463..1471496,1474824..1474992,1477939..1478202,1486396..1486438,1486509..1486527,1487322..1487593)
location: region:1471463-1487593:1
so has part: feature:1471463-1471496:1:exon
so has part: feature:1474824-1474992:1:exon
so has part: feature:1477939-1478202:1:exon
so has part: feature:1486396-1486438:1:exon
so has part: feature:1486509-1486527:1:exon
so has part: feature:1487322-1487593:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1471463-1471496:1:exon

position:1471496:1
position: 1471496
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1474824-1474992:1:exon

position:1474824:1
position: 1474824
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1474992:1
position: 1474992
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1477939-1478202:1:exon

position:1477939:1
position: 1477939
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1478202:1
position: 1478202
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1486396-1486438:1:exon

position:1486396:1
position: 1486396
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1486438:1
position: 1486438
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1486509-1486527:1:exon

position:1486509:1
position: 1486509
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1486527:1
position: 1486527
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1487322-1487593:1:exon

position:1487322:1
position: 1487322
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC119429182
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 451745
gene: LOC119429182
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cAMP-dependent protein kinase catalytic subunit PRKX-like
translation: MGAYIRTPGSCGTGTFGRVFLVKDKKSKAFFALKQMKISDVIRLKQEQHVHNEKEVLTEVSHTFLIRLFWTHHDEHFLYMLMDYVPGGELFSYLRSRGRFSNNSGLFYTSEIVCAIEYLHSKEMVYRDLKPENILLDSEGHIRLTDFGFAKKLSDRMRRKIHTDEEHGATVLVKDEEKEANSSEEAANSSEEEANCSEEEANGSEEEANGSEEEANGSEEEAKGSEEEAKGSEEEAKGSEEEAQGSEEEAKGSEEEANSSEEEAKG
SIO_010081: LOC119429182
subclass of: SO_0000673
so part of: LOC119429182
location: join(1471463..1471496,1474824..1474992,1477939..1478202,1486396..1486438,1486509..1486527,1487322..1487593)
location: region:1471463-1487593:1
so has part: feature:1471463-1471496:1:exon
so has part: feature:1474824-1474992:1:exon
so has part: feature:1477939-1478202:1:exon
so has part: feature:1486396-1486438:1:exon
so has part: feature:1486509-1486527:1:exon
so has part: feature:1487322-1487593:1:exon

XP_037552789.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1471463-1471496:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1474824-1474992:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1477939-1478202:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1486396-1486438:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1486509-1486527:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1487322-1487593:1:exon

LOC119429183
type: Gene
subclass of: SO_0000704
RO_0002162: 451745
gene: LOC119429183
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1598213..1686139)
location: region:1598213-1686139:-1
so has part: feature:1598213-1686139:-1:exon
subclass of: SO_0000010

119429183
type: Gene
SIO_000068: ncbigene

position:1598213:-1
position: 1598213
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1686139:-1
position: 1686139
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1598213-1686139:-1:exon

LOC119429183
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 451745
gene: LOC119429183
product: glycogenin-1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 31 Proteins, and 10% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_037696862.1
SIO_010081: LOC119429183
subclass of: SO_0000673
so part of: LOC119429183
location: complement(join(1598213..1598396,1599715..1599721,1621053..1621140,1621551..1621664,1623828..1623996,1626968..1627094,1629116..1629278,1635347..1635521,1650259..1650405,1659134..1659269,1674133..1674186,1674269..1674379,1684864..1684877,1686012..1686139))
location: region:1598213-1686139:-1
so has part: feature:1686012-1686139:-1:exon
so has part: feature:1684864-1684877:-1:exon
so has part: feature:1674269-1674379:-1:exon
so has part: feature:1674133-1674186:-1:exon
so has part: feature:1659134-1659269:-1:exon
so has part: feature:1650259-1650405:-1:exon
so has part: feature:1635347-1635521:-1:exon
so has part: feature:1629116-1629278:-1:exon
so has part: feature:1626968-1627094:-1:exon
so has part: feature:1623828-1623996:-1:exon
so has part: feature:1621551-1621664:-1:exon
so has part: feature:1621053-1621140:-1:exon
so has part: feature:1599715-1599721:-1:exon
so has part: feature:1598213-1598396:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1686012-1686139:-1:exon

position:1686012:-1
position: 1686012
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1684864-1684877:-1:exon

position:1684864:-1
position: 1684864
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1684877:-1
position: 1684877
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1674269-1674379:-1:exon

position:1674269:-1
position: 1674269
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1674379:-1
position: 1674379
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1674133-1674186:-1:exon

position:1674133:-1
position: 1674133
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1674186:-1
position: 1674186
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1659134-1659269:-1:exon

position:1659134:-1
position: 1659134
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1659269:-1
position: 1659269
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1650259-1650405:-1:exon

position:1650259:-1
position: 1650259
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1650405:-1
position: 1650405
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1635347-1635521:-1:exon

position:1635347:-1
position: 1635347
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1635521:-1
position: 1635521
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1629116-1629278:-1:exon

position:1629116:-1
position: 1629116
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1629278:-1
position: 1629278
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1626968-1627094:-1:exon

position:1626968:-1
position: 1626968
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1627094:-1
position: 1627094
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1623828-1623996:-1:exon

position:1623828:-1
position: 1623828
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1623996:-1
position: 1623996
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1621551-1621664:-1:exon

position:1621551:-1
position: 1621551
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1621664:-1
position: 1621664
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1621053-1621140:-1:exon

position:1621053:-1
position: 1621053
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1621140:-1
position: 1621140
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1599715-1599721:-1:exon

position:1599715:-1
position: 1599715
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1599721:-1
position: 1599721
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:1598213-1598396:-1:exon

position:1598396:-1
position: 1598396
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC119429183
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 451745
gene: LOC119429183
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: glycogenin-1
translation: MWDQVLKMFCSNMPEVVFVWISNMKQVLTPLLERVQDLLQALPWKTARSGPVAGIISAIGVALVGAASSYFAYQKKKLCFKIQGGQDPESGKVQQGSHSDPQASDPFSVGVYRNRSSISRCSTSSTHPIPCRQRETLDLQQTEDSHVSSAAGEAFVTLATTDSYCQGAVVVARSLRRHGTTRHIVVMITPNVSEQSRLALENVFDEVFSVDMMDSKDQVHLSFLGRPELGTTYTKIHCWTLTQYSKCVFLDADTLVLSNVDELFDRGELSAAPDPGWPDCFNSGVFVFRPSLLTHSRLLDHARHHGSFDGGDQGLLNSFFNSWPVEDISKHLPFIYNLCASTVYSYLPAFQQFGHNAKIVHFAGAVKPWSSPRGDSHLMERFASLWWKEYHWKDNHTTPPTPKTQQQQIFEREVEIPFIQNLDTSGSLLAHFRLSDSPHSHTEDSMDWGSTVAQLVEQPPLSEVVGSNHSRGTFMVVRFEDEFGSNSKSRGELQRVRRSKVRQDREGWQLVAGKARGGSRQDREDQDRIEGTRSKKTG
SIO_010081: LOC119429183
subclass of: SO_0000673
so part of: LOC119429183
location: complement(join(1598213..1598396,1599715..1599721,1621053..1621140,1621551..1621664,1623828..1623996,1626968..1627094,1629116..1629278,1635347..1635521,1650259..1650405,1659134..1659269,1674133..1674186,1674269..1674379,1684864..1684877,1686012..1686139))
location: region:1598213-1686139:-1
so has part: feature:1686012-1686139:-1:exon
so has part: feature:1684864-1684877:-1:exon
so has part: feature:1674269-1674379:-1:exon
so has part: feature:1674133-1674186:-1:exon
so has part: feature:1659134-1659269:-1:exon
so has part: feature:1650259-1650405:-1:exon
so has part: feature:1635347-1635521:-1:exon
so has part: feature:1629116-1629278:-1:exon
so has part: feature:1626968-1627094:-1:exon
so has part: feature:1623828-1623996:-1:exon
so has part: feature:1621551-1621664:-1:exon
so has part: feature:1621053-1621140:-1:exon
so has part: feature:1599715-1599721:-1:exon
so has part: feature:1598213-1598396:-1:exon

XP_037552790.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1686012-1686139:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1684864-1684877:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1674269-1674379:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1674133-1674186:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1659134-1659269:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1650259-1650405:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1635347-1635521:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1629116-1629278:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1626968-1627094:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1623828-1623996:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1621551-1621664:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1621053-1621140:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1599715-1599721:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1598213-1598396:-1:exon

cd99
type: Gene
subclass of: SO_0000704
RO_0002162: 451745
gene: cd99
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: <1698975..>1705153
location: region:1698975-1705153:1
so has part: feature:1698975-1705153:1:exon
subclass of: SO_0000010

119429168
type: Gene
SIO_000068: ncbigene

position:1698975:1
position: 1698975
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

position:1705153:1
position: 1705153
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1698975-1705153:1:exon

cd99
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 451745
gene: cd99
product: CD99 molecule
inference: similar to RNA sequence (same species):INSD:GELZ01023566.1
exception: annotated by transcript or proteomic data
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: added 375 bases not found in genome assembly; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 90% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_037696846.1
SIO_010081: cd99
subclass of: SO_0000673
so part of: cd99
location: join(<1698975..1699007,1700495..1700548,1701532..1701609,1705121..>1705153)
location: region:1698975-1705153:1
so has part: feature:1698975-1699007:1:exon
so has part: feature:1700495-1700548:1:exon
so has part: feature:1701532-1701609:1:exon
so has part: feature:1705121-1705153:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1698975-1699007:1:exon

position:1699007:1
position: 1699007
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1700495-1700548:1:exon

position:1700495:1
position: 1700495
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1700548:1
position: 1700548
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1701532-1701609:1:exon

position:1701532:1
position: 1701532
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1701609:1
position: 1701609
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1705121-1705153:1:exon

position:1705121:1
position: 1705121
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

cd99
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 451745
gene: cd99
inference: similar to RNA sequence (same species):INSD:GELZ01023566.1
exception: annotated by transcript or proteomic data
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: added 227 bases not found in genome assembly; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 3
product: CD99 molecule
translation: MKFCLRILSLLLLVGGTLTQDGFDLADALDDVATTPPKLKPKTTEKPKSDGGLDLADALKPGPTPKMDNPPKVPPKSGGGGGSFDDSDLFDVGAGDYKPDGGRSGGRAVDPGNDPQGGPDQPQDPDNMWDQVLKMFCSNMPA
SIO_010081: cd99
subclass of: SO_0000673
so part of: cd99
location: join(<1698975..1699007,1700495..1700548,1701532..1701609,1705121..>1705153)
location: region:1698975-1705153:1
so has part: feature:1698975-1699007:1:exon
so has part: feature:1700495-1700548:1:exon
so has part: feature:1701532-1701609:1:exon
so has part: feature:1705121-1705153:1:exon

XP_037552774.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1698975-1699007:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1700495-1700548:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1701532-1701609:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1705121-1705153:1:exon

LOC119429184
type: Gene
subclass of: SO_0000704
RO_0002162: 451745
gene: LOC119429184
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1985598..>2045413)
location: region:1985598-2045413:-1
so has part: feature:1985598-2045413:-1:exon
subclass of: SO_0000010

119429184
type: Gene
SIO_000068: ncbigene

position:1985598:-1
position: 1985598
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2045413:-1
position: 2045413
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1985598-2045413:-1:exon

LOC119429184
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 451745
gene: LOC119429184
product: NACHT, LRR and PYD domains-containing protein 12-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 15 Proteins, and 73% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_037696863.1
SIO_010081: LOC119429184
subclass of: SO_0000673
so part of: LOC119429184
location: complement(join(1985598..1985750,1986667..1986840,2002716..2002889,2008883..2009056,2016142..2016315,2016977..2017150,2017623..2017796,2037069..2038863,2038959..2039184,2044824..2044902,2045316..>2045413))
location: region:1985598-2045413:-1
so has part: feature:2045316-2045413:-1:exon
so has part: feature:2044824-2044902:-1:exon
so has part: feature:2038959-2039184:-1:exon
so has part: feature:2037069-2038863:-1:exon
so has part: feature:2017623-2017796:-1:exon
so has part: feature:2016977-2017150:-1:exon
so has part: feature:2016142-2016315:-1:exon
so has part: feature:2008883-2009056:-1:exon
so has part: feature:2002716-2002889:-1:exon
so has part: feature:1986667-1986840:-1:exon
so has part: feature:1985598-1985750:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2045316-2045413:-1:exon

position:2045316:-1
position: 2045316
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2044824-2044902:-1:exon

position:2044824:-1
position: 2044824
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2044902:-1
position: 2044902
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2038959-2039184:-1:exon

position:2038959:-1
position: 2038959
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2039184:-1
position: 2039184
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2037069-2038863:-1:exon

position:2037069:-1
position: 2037069
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2038863:-1
position: 2038863
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2017623-2017796:-1:exon

position:2017623:-1
position: 2017623
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2017796:-1
position: 2017796
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2016977-2017150:-1:exon

position:2016977:-1
position: 2016977
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2017150:-1
position: 2017150
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:2016142-2016315:-1:exon

position:2016142:-1
position: 2016142
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2016315:-1
position: 2016315
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:2008883-2009056:-1:exon

position:2008883:-1
position: 2008883
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2009056:-1
position: 2009056
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:2002716-2002889:-1:exon

position:2002716:-1
position: 2002716
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2002889:-1
position: 2002889
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1986667-1986840:-1:exon

position:1986667:-1
position: 1986667
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1986840:-1
position: 1986840
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1985598-1985750:-1:exon

position:1985750:-1
position: 1985750
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC119429184
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 451745
gene: LOC119429184
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: NACHT, LRR and PYD domains-containing protein 12-like
translation: GPGPGPSCVSLKSDWSKNYNPDFKSFQPPSAERVDQQSSEDPSAQSAQQHQTQLDSIFMLLEDNIVTFVKNELKKIQKVLSPDYPECLESQRENEEVLAGEDEEQRRSREALMKITDYFLRRMKQEELADRLQSKQVTVCQRNLKSCVKKRFQCVFEGIAKAGNPTLLNEIYTELYITEGGTGEVNDEHEVRQIETASRKPHTPETTIRQEDIFKLPPGRQEPVRTVMTKGVAGIGKTVLTQKFTLDWAEDKANQDIHFMFPFTFRELNVLKEKKFSLVELVHHFFTETKETCSFEDFQLVFIFDGLDECRLPLDFHNNQILTDVTESTSVDVLLTNLIRGKLLPSARLWITTRPAAANQIPAECVGMVTEVRGFTDPQKEEYFRKRFRDEEQASRIISHIKTSRSLHIMCHIPVFCWITATVLEDVLKSREGGELPNTLTEMYIHFLLVHTKVKKVKYDGGAETDPLWSPESRKMIESLGKVAFEQLQKGNLIFYESDLTECGIDIRAASVYSGVFTQIFKEERGLYQDKVFCFVHLSVQEFLAALHVHLTFINSGLNLMGEKQQTVSVWSKFFKNTNLNDVHQSAVNKALQSPNGHLDMFLRFLLGLSLQTNQTLLRGLLTQTGSSSQTNQETVQYIKNRISENLSAEKSINLFHCLNELNDGSLVEEIQQSLSSGSLSTDKLSPAQWSALVFILLTSGKDLDVFDLDKYSAKKEHLLRLLPVLKASNKALLPDCGLSETHCEVVGSALKSNPSHLTELDLSLNNLQDSGVKIMSAGLESPNCRLEKLRLISCSLSEISCSSLSSALKSNPSHLTELNLSENKLQDSGVKQLCGFLESPQCRLETMRLRSCSLSDISCSSLSSALKFNPSHLTELDLSENNLQDSGVKQLCGFLESPRCRLETLRLIYCSLSEISCSSLSSVLKSNPSHLTELEMSQNKLQDSGVKQLCGFLESPRCRLKTLRLWSCSLSKISCSSLSSALKSNPSHLTELDLDQNKLQDSGVKQLCGFLESPRCRLETLRLWSCSLSEISCSSLSSALKSNPSHLTELDLRENNLQDPDVQQLLDLVESPDYRLQTLSWM
SIO_010081: LOC119429184
subclass of: SO_0000673
so part of: LOC119429184
location: complement(join(1985741..1985750,1986667..1986840,2002716..2002889,2008883..2009056,2016142..2016315,2016977..2017150,2017623..2017796,2037069..2038863,2038959..2039184,2044824..2044902,2045316..>2045413))
location: region:1985741-2045413:-1
so has part: feature:2045316-2045413:-1:exon
so has part: feature:2044824-2044902:-1:exon
so has part: feature:2038959-2039184:-1:exon
so has part: feature:2037069-2038863:-1:exon
so has part: feature:2017623-2017796:-1:exon
so has part: feature:2016977-2017150:-1:exon
so has part: feature:2016142-2016315:-1:exon
so has part: feature:2008883-2009056:-1:exon
so has part: feature:2002716-2002889:-1:exon
so has part: feature:1986667-1986840:-1:exon
so has part: feature:1985741-1985750:-1:exon

XP_037552791.1
type: Protein
SIO_000068: ncbiprotein

position:1985741:-1
position: 1985741
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2045316-2045413:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2044824-2044902:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2038959-2039184:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2037069-2038863:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2017623-2017796:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2016977-2017150:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2016142-2016315:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2008883-2009056:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2002716-2002889:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1986667-1986840:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1985741-1985750:-1:exon

LOC119429158
type: Gene
subclass of: SO_0000704
RO_0002162: 451745
gene: LOC119429158
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2045452..2047726)
location: region:2045452-2047726:-1
so has part: feature:2045452-2047726:-1:exon
subclass of: SO_0000011

119429158
type: Gene
SIO_000068: ncbigene

position:2045452:-1
position: 2045452
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2047726:-1
position: 2047726
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2045452-2047726:-1:exon

LOC119429158
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 451745
nc RNA class: lncRNA
gene: LOC119429158
product: uncharacterized LOC119429158
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XR_005187737.1
SIO_010081: LOC119429158
subclass of: SO_0000673
so part of: LOC119429158
location: complement(join(2045452..2045483,2045561..2045692,2047674..2047726))
location: region:2045452-2047726:-1
so has part: feature:2047674-2047726:-1:exon
so has part: feature:2045561-2045692:-1:exon
so has part: feature:2045452-2045483:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2047674-2047726:-1:exon

position:2047674:-1
position: 2047674
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2045561-2045692:-1:exon

position:2045561:-1
position: 2045561
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2045692:-1
position: 2045692
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2045452-2045483:-1:exon

position:2045483:-1
position: 2045483
reference: sequence
type: ReverseStrandPosition
type: ExactPosition