Nematolebias whitei isolate Nwh7 chromosome 19, NemWhi1, whole genome shotgun sequence.
type: Entry
definition: Nematolebias whitei isolate Nwh7 chromosome 19, NemWhi1, whole genome shotgun sequence.
sequence version: NC_056516.1
sequence date: 2021-07-29
sequence: sequence
division: CON
label: NC_056516.1
type: RefSeq
SIO_000068: refseq
dblink: PRJNA678356
dblink: SAMN12588121
keyword: WGS
keyword: RefSeq
source: Nematolebias whitei (Rio pearlfish)
organism: Nematolebias whitei
taxonomy: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Atherinomorphae; Cyprinodontiformes; Rivulidae; Nematolebias.
comment: REFSEQ INFORMATION: The reference sequence is identical to\nCM029751.1.\nAssembly name: NemWhi1\nThe genomic sequence for this RefSeq record is from the\nwhole-genome assembly released by the Michigan State University on\n2020/10/22. The original whole-genome shotgun project has the\naccession JAAMPK000000000.1.\n\n##Genome-Assembly-Data-START##\nAssembly Provider :: Michigan State University\nAssembly Method :: SuperNova, Chicago, HiC v. April 2020\nAssembly Name :: NemWhi1\nGenome Representation :: Full\nExpected Final Version :: Yes\nGenome Coverage :: 53.63x\nSequencing Technology :: Illumina\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI\nAnnotation Status :: Updated annotation\nAnnotation Name :: Nematolebias whitei Updated\n Annotation Release 100.20210725\nAnnotation Version :: 100.20210725\nAnnotation Pipeline :: NCBI eukaryotic genome annotation\n pipeline\nAnnotation Software Version :: 9.0\nAnnotation Method :: Best-placed RefSeq; propagated\n RefSeq model\nFeatures Annotated :: Gene; mRNA; CDS; ncRNA\n##Genome-Annotation-Data-END##

sequence
subclass of: SO_0000340
sequence length: 41097853
topology: linear
so has quality: SO_0000987
location: 1..41097853
location: region:1-41097853:1
RO_0002162: 451745

NC_056516
type: RefSeq
SIO_000068: refseq

PRJNA678356
type: BioProject
SIO_000068: bioproject

SAMN12588121
type: BioSample
SIO_000068: biosample

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:41097853:1
position: 41097853
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-41097853:1:source
so part of: sequence
organism: Nematolebias whitei
mol type: genomic DNA
isolate: Nwh7
chromosome: 19
sex: female
tissue type: liver
dev stage: adult
country: Brazil: Barra de Sao Joao

451745
type: Taxonomy
SIO_000068: taxonomy

LOC119425602
type: Gene
subclass of: SO_0000704
RO_0002162: 451745
gene: LOC119425602
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(142046..144410)
location: region:142046-144410:-1
so has part: feature:142046-144410:-1:exon
subclass of: SO_0000011

119425602
type: Gene
SIO_000068: ncbigene

position:142046:-1
position: 142046
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:144410:-1
position: 144410
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:142046-144410:-1:exon

LOC119425602
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 451745
nc RNA class: lncRNA
gene: LOC119425602
product: uncharacterized LOC119425602, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XR_005187573.1
SIO_010081: LOC119425602
subclass of: SO_0000673
so part of: LOC119425602
location: complement(join(142046..142340,143722..143764,144313..144410))
location: region:142046-144410:-1
so has part: feature:144313-144410:-1:exon
so has part: feature:143722-143764:-1:exon
so has part: feature:142046-142340:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:144313-144410:-1:exon

position:144313:-1
position: 144313
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:143722-143764:-1:exon

position:143722:-1
position: 143722
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:143764:-1
position: 143764
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:142046-142340:-1:exon

position:142340:-1
position: 142340
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC119425602
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 451745
nc RNA class: lncRNA
gene: LOC119425602
product: uncharacterized LOC119425602, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XR_005187572.1
SIO_010081: LOC119425602
subclass of: SO_0000673
so part of: LOC119425602
location: complement(join(142046..142340,143470..143521,143722..143764,144313..144410))
location: region:142046-144410:-1
so has part: feature:144313-144410:-1:exon
so has part: feature:143722-143764:-1:exon
so has part: feature:143470-143521:-1:exon
so has part: feature:142046-142340:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:144313-144410:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:143722-143764:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:143470-143521:-1:exon

position:143470:-1
position: 143470
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:143521:-1
position: 143521
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:142046-142340:-1:exon

LOC119426136
type: Gene
subclass of: SO_0000704
RO_0002162: 451745
gene: LOC119426136
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 372307..374165
location: region:372307-374165:1
so has part: feature:372307-374165:1:exon
subclass of: SO_0000010

119426136
type: Gene
SIO_000068: ncbigene

position:372307:1
position: 372307
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:374165:1
position: 374165
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:372307-374165:1:exon

LOC119426136
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 451745
gene: LOC119426136
product: uncharacterized LOC119426136
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_037693697.1
SIO_010081: LOC119426136
subclass of: SO_0000673
so part of: LOC119426136
location: join(372307..372834,373584..374165)
location: region:372307-374165:1
so has part: feature:372307-372834:1:exon
so has part: feature:373584-374165:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:372307-372834:1:exon

position:372834:1
position: 372834
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:373584-374165:1:exon

position:373584:1
position: 373584
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC119426136
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 451745
gene: LOC119426136
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC119426136
translation: MSSGSTCAVVGCHNSSRKLKDELETYCFAHQQLRKACVCPARYELLSMPRKEDRKRAWLAALKLKYPPKRVYVCSFHFIDKKPTELHPDPELYLGYDRAPPKKRRQLIRTTVSQTASSNIDKTAQSVPECTVDSPSVIPDLASVSTQPPGPHLHSVHTQWEDPSLKDHHQYCNTSGRKDVQDKTTQCDEVAFFLLQNDADALLYTGIALETFNTLVSALEGDDNNEFTMPVQDQVLITLMKIKTNRVCSP
SIO_010081: LOC119426136
subclass of: SO_0000673
so part of: LOC119426136
location: join(372450..372834,373584..373951)
location: region:372450-373951:1
so has part: feature:372450-372834:1:exon
so has part: feature:373584-373951:1:exon

XP_037549625.1
type: Protein
SIO_000068: ncbiprotein

position:372450:1
position: 372450
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:373951:1
position: 373951
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:372450-372834:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:373584-373951:1:exon

khdrbs3
type: Gene
subclass of: SO_0000704
RO_0002162: 451745
gene: khdrbs3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(952663..1328836)
location: region:952663-1328836:-1
so has part: feature:952663-1328836:-1:exon
subclass of: SO_0000010

119426153
type: Gene
SIO_000068: ncbigene

position:952663:-1
position: 952663
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1328836:-1
position: 1328836
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:952663-1328836:-1:exon

khdrbs3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 451745
gene: khdrbs3
product: KH domain containing, RNA binding, signal transduction associated 3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 13 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_037693716.1
SIO_010081: khdrbs3
subclass of: SO_0000673
so part of: khdrbs3
location: complement(join(952663..953015,968283..968335,1016486..1016568,1078211..1078379,1090015..1090154,1092506..1092652,1125276..1125392,1164804..1164922,1328582..1328836))
location: region:952663-1328836:-1
so has part: feature:1328582-1328836:-1:exon
so has part: feature:1164804-1164922:-1:exon
so has part: feature:1125276-1125392:-1:exon
so has part: feature:1092506-1092652:-1:exon
so has part: feature:1090015-1090154:-1:exon
so has part: feature:1078211-1078379:-1:exon
so has part: feature:1016486-1016568:-1:exon
so has part: feature:968283-968335:-1:exon
so has part: feature:952663-953015:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1328582-1328836:-1:exon

position:1328582:-1
position: 1328582
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1164804-1164922:-1:exon

position:1164804:-1
position: 1164804
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1164922:-1
position: 1164922
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1125276-1125392:-1:exon

position:1125276:-1
position: 1125276
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1125392:-1
position: 1125392
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1092506-1092652:-1:exon

position:1092506:-1
position: 1092506
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1092652:-1
position: 1092652
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1090015-1090154:-1:exon

position:1090015:-1
position: 1090015
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1090154:-1
position: 1090154
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1078211-1078379:-1:exon

position:1078211:-1
position: 1078211
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1078379:-1
position: 1078379
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1016486-1016568:-1:exon

position:1016486:-1
position: 1016486
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1016568:-1
position: 1016568
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:968283-968335:-1:exon

position:968283:-1
position: 968283
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:968335:-1
position: 968335
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:952663-953015:-1:exon

position:953015:-1
position: 953015
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

khdrbs3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 451745
gene: khdrbs3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: KH domain-containing, RNA-binding, signal transduction-associated protein 3
translation: MESEKYLPELLAEKDTLDPSFEHSLRLLEQEIEKIQRDDDKDEEKFIDVVINKNMKLGQKVLIPVKQFPKFNFVGKLLGPRGNSLKRLQEDTLTKMSILGKGSMRDKEKEEELRQSGEAKYQHLNEDLHVLIEVFAPPAEAYARMGHALEEIKKFLIPDYNDEIRQAQLQELTYLNGGSEEAKVPSARGKSSARGRGTPVPGPPRTRGGVPPLHAVVPRGAAPRGAPPSRAPSSRSRGVQRARGVSYRSAPPIVQDTYGEYDYDDGYGTAYDDQGYESYDNNYSNQGQNSDDYYEYEESGESYDSYGQEEWANSRGKAPSARTTKGVFRDQPYSRY
SIO_010081: khdrbs3
subclass of: SO_0000673
so part of: khdrbs3
location: complement(join(952924..953015,968283..968335,1016486..1016568,1078211..1078379,1090015..1090154,1092506..1092652,1125276..1125392,1164804..1164922,1328582..1328672))
location: region:952924-1328672:-1
so has part: feature:1328582-1328672:-1:exon
so has part: feature:1164804-1164922:-1:exon
so has part: feature:1125276-1125392:-1:exon
so has part: feature:1092506-1092652:-1:exon
so has part: feature:1090015-1090154:-1:exon
so has part: feature:1078211-1078379:-1:exon
so has part: feature:1016486-1016568:-1:exon
so has part: feature:968283-968335:-1:exon
so has part: feature:952924-953015:-1:exon

XP_037549644.1
type: Protein
SIO_000068: ncbiprotein

position:952924:-1
position: 952924
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1328672:-1
position: 1328672
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1328582-1328672:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1164804-1164922:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1125276-1125392:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1092506-1092652:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1090015-1090154:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1078211-1078379:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1016486-1016568:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:968283-968335:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:952924-953015:-1:exon

LOC119426014
type: Gene
subclass of: SO_0000704
RO_0002162: 451745
gene: LOC119426014
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1419318..1421717
location: region:1419318-1421717:1
so has part: feature:1419318-1421717:1:exon
subclass of: SO_0000010

119426014
type: Gene
SIO_000068: ncbigene

position:1419318:1
position: 1419318
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1421717:1
position: 1421717
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1419318-1421717:1:exon

LOC119426014
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 451745
gene: LOC119426014
product: CMP-N-acetylneuraminate-beta-galactosamide- alpha-2,3-sialyltransferase 1-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins, and 16% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_037693576.1
SIO_010081: LOC119426014
subclass of: SO_0000673
so part of: LOC119426014
location: join(1419318..1419545,1419669..1419865,1419949..1420128,1421630..1421717)
location: region:1419318-1421717:1
so has part: feature:1419318-1419545:1:exon
so has part: feature:1419669-1419865:1:exon
so has part: feature:1419949-1420128:1:exon
so has part: feature:1421630-1421717:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1419318-1419545:1:exon

position:1419545:1
position: 1419545
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1419669-1419865:1:exon

position:1419669:1
position: 1419669
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1419865:1
position: 1419865
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1419949-1420128:1:exon

position:1419949:1
position: 1419949
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1420128:1
position: 1420128
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1421630-1421717:1:exon

position:1421630:1
position: 1421630
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC119426014
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 451745
gene: LOC119426014
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: CMP-N-acetylneuraminate-beta-galactosamide- alpha-2,3-sialyltransferase 1-like
translation: MAVKIKVMILLLVSSAALLFLFMLSDQLQVYNQKPCSCDKCLSEDKTFLFHHASHSVEPFLTANSKLSEEDYMWWKHLQGERQNFNVFKATVKDLFQIFPAKPHLEKPSSDQCRTCAVVGNSVNLRRSHYGPLIDSQDVVIRINHGKVKGYEKDVGSRTTHRVMYPESATQIDSTTHLVLFPFKMQDLQWLLKVYSKGYFGSGHPSNASLSPSQTLSCHSRMSPPEYVYD
SIO_010081: LOC119426014
subclass of: SO_0000673
so part of: LOC119426014
location: join(1419318..1419545,1419669..1419865,1419949..1420128,1421630..1421717)
location: region:1419318-1421717:1
so has part: feature:1419318-1419545:1:exon
so has part: feature:1419669-1419865:1:exon
so has part: feature:1419949-1420128:1:exon
so has part: feature:1421630-1421717:1:exon

XP_037549504.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1419318-1419545:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1419669-1419865:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1419949-1420128:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1421630-1421717:1:exon

fam135b
type: Gene
subclass of: SO_0000704
RO_0002162: 451745
gene: fam135b
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1627007..1818913)
location: region:1627007-1818913:-1
so has part: feature:1627007-1818913:-1:exon
subclass of: SO_0000010

119426015
type: Gene
SIO_000068: ncbigene

position:1627007:-1
position: 1627007
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1818913:-1
position: 1818913
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1627007-1818913:-1:exon

fam135b
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 451745
gene: fam135b
product: family with sequence similarity 135 member B
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 64% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_037693577.1
SIO_010081: fam135b
subclass of: SO_0000673
so part of: fam135b
location: complement(join(1627007..1627275,1628922..1629035,1629551..1629661,1629802..1629953,1634754..1634851,1634940..1635031,1635170..1635336,1643426..1645292,1651882..1652036,1652112..1652185,1666478..1666633,1691695..1691744,1691992..1692151,1715770..1715896,1745904..1745974,1777716..1777855,1812826..1812905,1818837..1818913))
location: region:1627007-1818913:-1
so has part: feature:1818837-1818913:-1:exon
so has part: feature:1812826-1812905:-1:exon
so has part: feature:1777716-1777855:-1:exon
so has part: feature:1745904-1745974:-1:exon
so has part: feature:1715770-1715896:-1:exon
so has part: feature:1691992-1692151:-1:exon
so has part: feature:1691695-1691744:-1:exon
so has part: feature:1666478-1666633:-1:exon
so has part: feature:1652112-1652185:-1:exon
so has part: feature:1651882-1652036:-1:exon
so has part: feature:1643426-1645292:-1:exon
so has part: feature:1635170-1635336:-1:exon
so has part: feature:1634940-1635031:-1:exon
so has part: feature:1634754-1634851:-1:exon
so has part: feature:1629802-1629953:-1:exon
so has part: feature:1629551-1629661:-1:exon
so has part: feature:1628922-1629035:-1:exon
so has part: feature:1627007-1627275:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1818837-1818913:-1:exon

position:1818837:-1
position: 1818837
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1812826-1812905:-1:exon

position:1812826:-1
position: 1812826
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1812905:-1
position: 1812905
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1777716-1777855:-1:exon

position:1777716:-1
position: 1777716
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1777855:-1
position: 1777855
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1745904-1745974:-1:exon

position:1745904:-1
position: 1745904
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1745974:-1
position: 1745974
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1715770-1715896:-1:exon

position:1715770:-1
position: 1715770
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1715896:-1
position: 1715896
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1691992-1692151:-1:exon

position:1691992:-1
position: 1691992
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1692151:-1
position: 1692151
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1691695-1691744:-1:exon

position:1691695:-1
position: 1691695
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1691744:-1
position: 1691744
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1666478-1666633:-1:exon

position:1666478:-1
position: 1666478
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1666633:-1
position: 1666633
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1652112-1652185:-1:exon

position:1652112:-1
position: 1652112
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1652185:-1
position: 1652185
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1651882-1652036:-1:exon

position:1651882:-1
position: 1651882
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1652036:-1
position: 1652036
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1643426-1645292:-1:exon

position:1643426:-1
position: 1643426
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1645292:-1
position: 1645292
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1635170-1635336:-1:exon

position:1635170:-1
position: 1635170
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1635336:-1
position: 1635336
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1634940-1635031:-1:exon

position:1634940:-1
position: 1634940
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1635031:-1
position: 1635031
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:1634754-1634851:-1:exon

position:1634754:-1
position: 1634754
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1634851:-1
position: 1634851
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:1629802-1629953:-1:exon

position:1629802:-1
position: 1629802
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1629953:-1
position: 1629953
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:1629551-1629661:-1:exon

position:1629551:-1
position: 1629551
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1629661:-1
position: 1629661
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:1628922-1629035:-1:exon

position:1628922:-1
position: 1628922
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1629035:-1
position: 1629035
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:1627007-1627275:-1:exon

position:1627275:-1
position: 1627275
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

fam135b
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 451745
gene: fam135b
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein FAM135B
translation: MSEVQATLEFSLELHKFHNVDLFQRGFYQIRAGLKVSPRVIHRLTVTTRDNTGECSFSSASVYDSTVFSRIIQILYRNEEIAVNDCMTFKVHLLLDGEKVEEALSEVDFHLKLDLHFTDNEQHFARTGKTSWLGKGSPGSTSDPSALPVENLMFGAGYCKPVISEGSFYVPSENCLQRAHTWHRRLCRLLLVAHKGLHTYCGTLMKEIPQLILDPLEPDVLPVEETLNQLSIELQLQENHEKVAEQISKDVNQLCSQLAALWSCFLEAAVLNPHILSHLAHEHHTLRVRRFSEAYFFTEHPKEISVMFQEELINRHGQIAAEVRSSEYLTKMPPLPVECLDIDGDWNSLPIIFEDRYVESPQTETKSHVPKLETTKEQTSSPLTSPAEKVPEQSQETSSSAIPLDSSDSKDNLGLAMNVSCIIDQHRTDVRSTQNFVQIGAEHSAAEAENIEEPAECQRQHEESCRPGWTYSAVRPYGVDPHREEGGPSHDMDDTSYHKATENTIQPCDALNYNTVKENGNNEEDSDSTMPFNHSMDDDSEDAPSNTFLSSFMHPATPFISGDMRKEKGHHGGLVNSKTMKRSSSLISDSGIESEPSSVVWPVETVLRGRPSLDFSSEREIPNQIVLNHPVHCSCVEGLQMESNGSLPSGGIQASLNSISSLPYEEDQQLRQLSKLTKSLSAPQISSPEDAEEGHVLLNQDTDTVHLQGLELRLEQGECSQFNRNPDQNLKNISSEKSNSQQYPSEMCRVKLVLSGESEVHSQESIESPSVNESAVIGSLGKEKDHQTRTSGRSTSVDDVHLGESEAASCNCGSKPCVHQSAAEQEDISTEDDCQSLHLSKLQSSEDKPYVGYLQEPGKQSQSIEFTITPRPNELTGLTTYHIPSMVPLSGTSTGDCQTKPSKIHSSGLAFVNKKMVEVVNMSVSCAPTCLPFSSALRDSPSISGISTRQASSPITHQPLGSFGIISSSSLTPINMDEETNERMLNFYKAKEELLKELTFQASLYSDVPLLASDLPYFPPEEDDEEFDDGIHLVVCVHGLDGNSADLRLVKTFIELGLPGSRLDFLMSERNQADTFADFDTMTDRLLDEIIQHIQLYNLTIGRISFIGHSLGNVIIRSVLTRPRFRCYLPKLHTFLSLSGPHLGTLYNSSTLVSTGLWLMQKLKKSGSLLQLTFRDHVDPRKTFLYLLSQKPGLQFFKNVVLVASPQDRYVPFHSARIEMCRTALRDRTTGPVYTEMINNLLQPVVEAKECRLIRQNVFHALPNTANTLIGRAAHIAVLDSELFLEKFFLVAGLSYFR
SIO_010081: fam135b
subclass of: SO_0000673
so part of: fam135b
location: complement(join(1627070..1627275,1628922..1629035,1629551..1629661,1629802..1629953,1634754..1634851,1634940..1635031,1635170..1635336,1643426..1645292,1651882..1652036,1652112..1652185,1666478..1666633,1691695..1691744,1691992..1692151,1715770..1715896,1745904..1745974,1777716..1777855,1812826..1812905,1818837..1818913))
location: region:1627070-1818913:-1
so has part: feature:1818837-1818913:-1:exon
so has part: feature:1812826-1812905:-1:exon
so has part: feature:1777716-1777855:-1:exon
so has part: feature:1745904-1745974:-1:exon
so has part: feature:1715770-1715896:-1:exon
so has part: feature:1691992-1692151:-1:exon
so has part: feature:1691695-1691744:-1:exon
so has part: feature:1666478-1666633:-1:exon
so has part: feature:1652112-1652185:-1:exon
so has part: feature:1651882-1652036:-1:exon
so has part: feature:1643426-1645292:-1:exon
so has part: feature:1635170-1635336:-1:exon
so has part: feature:1634940-1635031:-1:exon
so has part: feature:1634754-1634851:-1:exon
so has part: feature:1629802-1629953:-1:exon
so has part: feature:1629551-1629661:-1:exon
so has part: feature:1628922-1629035:-1:exon
so has part: feature:1627070-1627275:-1:exon

XP_037549505.1
type: Protein
SIO_000068: ncbiprotein

position:1627070:-1
position: 1627070
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1818837-1818913:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1812826-1812905:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1777716-1777855:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1745904-1745974:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1715770-1715896:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1691992-1692151:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1691695-1691744:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1666478-1666633:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1652112-1652185:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1651882-1652036:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1643426-1645292:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1635170-1635336:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1634940-1635031:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1634754-1634851:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1629802-1629953:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1629551-1629661:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1628922-1629035:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1627070-1627275:-1:exon

LOC119425253
type: Gene
subclass of: SO_0000704
RO_0002162: 451745
gene: LOC119425253
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1906230..>1954215
location: region:1906230-1954215:1
so has part: feature:1906230-1954215:1:exon
subclass of: SO_0000010

119425253
type: Gene
SIO_000068: ncbigene

position:1906230:1
position: 1906230
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1954215:1
position: 1954215
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1906230-1954215:1:exon

LOC119425253
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 451745
gene: LOC119425253
product: collagen alpha-1(IX) chain
inference: similar to RNA sequence (same species):INSD:GELZ01015731.1
exception: annotated by transcript or proteomic data
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: added 63 bases not found in genome assembly; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_037692777.1
SIO_010081: LOC119425253
subclass of: SO_0000673
so part of: LOC119425253
location: join(1906230..1906341,1910037..1910122,1936252..1936323,1937372..1937501,1943054..1943450,1943806..1943886,1952920..1952937,1954126..>1954215)
location: region:1906230-1954215:1
so has part: feature:1906230-1906341:1:exon
so has part: feature:1910037-1910122:1:exon
so has part: feature:1936252-1936323:1:exon
so has part: feature:1937372-1937501:1:exon
so has part: feature:1943054-1943450:1:exon
so has part: feature:1943806-1943886:1:exon
so has part: feature:1952920-1952937:1:exon
so has part: feature:1954126-1954215:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1906230-1906341:1:exon

position:1906341:1
position: 1906341
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1910037-1910122:1:exon

position:1910037:1
position: 1910037
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1910122:1
position: 1910122
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1936252-1936323:1:exon

position:1936252:1
position: 1936252
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1936323:1
position: 1936323
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1937372-1937501:1:exon

position:1937372:1
position: 1937372
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1937501:1
position: 1937501
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1943054-1943450:1:exon

position:1943054:1
position: 1943054
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1943450:1
position: 1943450
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1943806-1943886:1:exon

position:1943806:1
position: 1943806
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1943886:1
position: 1943886
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1952920-1952937:1:exon

position:1952920:1
position: 1952920
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1952937:1
position: 1952937
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1954126-1954215:1:exon

position:1954126:1
position: 1954126
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC119425253
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 451745
gene: LOC119425253
inference: similar to RNA sequence (same species):INSD:GELZ01015731.1
exception: annotated by transcript or proteomic data
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: added 63 bases not found in genome assembly; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: collagen alpha-1(IX) chain
translation: MAFPRPCLKRERPHHPELLTYSSLCLALLFLVFSPSLGQLDLSRLDGDTVCPPIRTGQDDLPGFDLITQFQLDVIPLKGVRKVDGSTPLQVAYRLDREANFQIPTMLNFPRGFPDEYSLMTTFRMIKSTVNKVWNVWQIVDEDGYKQAGLRLNGDQQALEYFLMGADGNLQTVTFPGLSVLFNTKWHKVMIGVERDQVTLYVDCQPVDQKPIKGKGLINTVGDTLIGRLDSDPEASVVFELQWMLIHCDPKRAQRENCNELPATEMFANAEPEKTIPGPPGAPGPEGPHGAPGENGRDGRDGLPGSPGSPGLPGSKGEKGEI
SIO_010081: LOC119425253
subclass of: SO_0000673
so part of: LOC119425253
location: join(1906313..1906341,1910037..1910122,1936252..1936323,1937372..1937501,1943054..1943450,1943806..1943886,1952920..1952937,1954126..>1954215)
location: region:1906313-1954215:1
so has part: feature:1906313-1906341:1:exon
so has part: feature:1910037-1910122:1:exon
so has part: feature:1936252-1936323:1:exon
so has part: feature:1937372-1937501:1:exon
so has part: feature:1943054-1943450:1:exon
so has part: feature:1943806-1943886:1:exon
so has part: feature:1952920-1952937:1:exon
so has part: feature:1954126-1954215:1:exon

XP_037548705.1
type: Protein
SIO_000068: ncbiprotein

position:1906313:1
position: 1906313
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1906313-1906341:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1910037-1910122:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1936252-1936323:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1937372-1937501:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1943054-1943450:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1943806-1943886:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1952920-1952937:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1954126-1954215:1:exon

LOC119426016
type: Gene
subclass of: SO_0000704
RO_0002162: 451745
gene: LOC119426016
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1960203..2022264
location: region:1960203-2022264:1
so has part: feature:1960203-2022264:1:exon
subclass of: SO_0000010

119426016
type: Gene
SIO_000068: ncbigene

position:1960203:1
position: 1960203
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2022264:1
position: 2022264
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1960203-2022264:1:exon

LOC119426016
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 451745
gene: LOC119426016
product: collagen alpha-1(I) chain
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 69% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_037693578.1
SIO_010081: LOC119426016
subclass of: SO_0000673
so part of: LOC119426016
location: join(1960203..1960274,1993228..1993299,1993484..1993528,1993666..1993701,1993788..1993811,1993920..1993973,2021150..2021221,2022169..2022264)
location: region:1960203-2022264:1
so has part: feature:1960203-1960274:1:exon
so has part: feature:1993228-1993299:1:exon
so has part: feature:1993484-1993528:1:exon
so has part: feature:1993666-1993701:1:exon
so has part: feature:1993788-1993811:1:exon
so has part: feature:1993920-1993973:1:exon
so has part: feature:2021150-2021221:1:exon
so has part: feature:2022169-2022264:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1960203-1960274:1:exon

position:1960274:1
position: 1960274
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1993228-1993299:1:exon

position:1993228:1
position: 1993228
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1993299:1
position: 1993299
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1993484-1993528:1:exon

position:1993484:1
position: 1993484
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1993528:1
position: 1993528
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1993666-1993701:1:exon

position:1993666:1
position: 1993666
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1993701:1
position: 1993701
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1993788-1993811:1:exon

position:1993788:1
position: 1993788
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1993811:1
position: 1993811
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1993920-1993973:1:exon

position:1993920:1
position: 1993920
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1993973:1
position: 1993973
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:2021150-2021221:1:exon

position:2021150:1
position: 2021150
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2021221:1
position: 2021221
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:2022169-2022264:1:exon

position:2022169:1
position: 2022169
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC119426016
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 451745
gene: LOC119426016
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: collagen alpha-1(I) chain
translation: MLLDLTAAFDTVDHHILLSRLENWGSKGEKGEIGLPGQRGLSGLPGPSGPSGPMGPRGPVGERGLPGFPGPPGPPGPASEGPPGPPGKPGTPGDEGNIGPEGPPGPKGGPGVSGPPGPPGPPGPVGPPGANSEGSGEAVSLLLSAKCFLNACQWEW
SIO_010081: LOC119426016
subclass of: SO_0000673
so part of: LOC119426016
location: join(1960203..1960274,1993228..1993299,1993484..1993528,1993666..1993701,1993788..1993811,1993920..1993973,2021150..2021221,2022169..2022264)
location: region:1960203-2022264:1
so has part: feature:1960203-1960274:1:exon
so has part: feature:1993228-1993299:1:exon
so has part: feature:1993484-1993528:1:exon
so has part: feature:1993666-1993701:1:exon
so has part: feature:1993788-1993811:1:exon
so has part: feature:1993920-1993973:1:exon
so has part: feature:2021150-2021221:1:exon
so has part: feature:2022169-2022264:1:exon

XP_037549506.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1960203-1960274:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1993228-1993299:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1993484-1993528:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1993666-1993701:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1993788-1993811:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1993920-1993973:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2021150-2021221:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2022169-2022264:1:exon

LOC119425251
type: Gene
subclass of: SO_0000704
RO_0002162: 451745
gene: LOC119425251
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2022333..2051571
location: region:2022333-2051571:1
so has part: feature:2022333-2051571:1:exon
subclass of: SO_0000010

119425251
type: Gene
SIO_000068: ncbigene

position:2022333:1
position: 2022333
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2051571:1
position: 2051571
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2022333-2051571:1:exon

LOC119425251
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 451745
gene: LOC119425251
product: collagen alpha-3(IX) chain
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_037692776.1
SIO_010081: LOC119425251
subclass of: SO_0000673
so part of: LOC119425251
location: join(2022333..2022383,2023609..2023662,2023824..2023877,2023995..2024048,2024116..2024169,2024261..2024314,2024393..2024446,2024532..2024585,2025191..2025244,2028796..2028840,2028989..2029042,2029131..2029184,2029337..2029390,2031148..2031219,2031321..2031356,2031429..2031473,2033431..2033463,2033662..2033808,2041783..2041837,2042581..2042775,2043496..2043582,2051075..2051571)
location: region:2022333-2051571:1
so has part: feature:2022333-2022383:1:exon
so has part: feature:2023609-2023662:1:exon
so has part: feature:2023824-2023877:1:exon
so has part: feature:2023995-2024048:1:exon
so has part: feature:2024116-2024169:1:exon
so has part: feature:2024261-2024314:1:exon
so has part: feature:2024393-2024446:1:exon
so has part: feature:2024532-2024585:1:exon
so has part: feature:2025191-2025244:1:exon
so has part: feature:2028796-2028840:1:exon
so has part: feature:2028989-2029042:1:exon
so has part: feature:2029131-2029184:1:exon
so has part: feature:2029337-2029390:1:exon
so has part: feature:2031148-2031219:1:exon
so has part: feature:2031321-2031356:1:exon
so has part: feature:2031429-2031473:1:exon
so has part: feature:2033431-2033463:1:exon
so has part: feature:2033662-2033808:1:exon
so has part: feature:2041783-2041837:1:exon
so has part: feature:2042581-2042775:1:exon
so has part: feature:2043496-2043582:1:exon
so has part: feature:2051075-2051571:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2022333-2022383:1:exon

position:2022383:1
position: 2022383
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2023609-2023662:1:exon

position:2023609:1
position: 2023609
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2023662:1
position: 2023662
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2023824-2023877:1:exon

position:2023824:1
position: 2023824
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2023877:1
position: 2023877
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2023995-2024048:1:exon

position:2023995:1
position: 2023995
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2024048:1
position: 2024048
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2024116-2024169:1:exon

position:2024116:1
position: 2024116
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2024169:1
position: 2024169
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2024261-2024314:1:exon

position:2024261:1
position: 2024261
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2024314:1
position: 2024314
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:2024393-2024446:1:exon

position:2024393:1
position: 2024393
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2024446:1
position: 2024446
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:2024532-2024585:1:exon

position:2024532:1
position: 2024532
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2024585:1
position: 2024585
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:2025191-2025244:1:exon

position:2025191:1
position: 2025191
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2025244:1
position: 2025244
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:2028796-2028840:1:exon

position:2028796:1
position: 2028796
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2028840:1
position: 2028840
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:2028989-2029042:1:exon

position:2028989:1
position: 2028989
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2029042:1
position: 2029042
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:2029131-2029184:1:exon

position:2029131:1
position: 2029131
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2029184:1
position: 2029184
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:2029337-2029390:1:exon

position:2029337:1
position: 2029337
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2029390:1
position: 2029390
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:2031148-2031219:1:exon

position:2031148:1
position: 2031148
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2031219:1
position: 2031219
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:2031321-2031356:1:exon

position:2031321:1
position: 2031321
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2031356:1
position: 2031356
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:2031429-2031473:1:exon

position:2031429:1
position: 2031429
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2031473:1
position: 2031473
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:2033431-2033463:1:exon

position:2033431:1
position: 2033431
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2033463:1
position: 2033463
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:2033662-2033808:1:exon

position:2033662:1
position: 2033662
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2033808:1
position: 2033808
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:2041783-2041837:1:exon

position:2041783:1
position: 2041783
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2041837:1
position: 2041837
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:2042581-2042775:1:exon

position:2042581:1
position: 2042581
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2042775:1
position: 2042775
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:2043496-2043582:1:exon

position:2043496:1
position: 2043496
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2043582:1
position: 2043582
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:2051075-2051571:1:exon

position:2051075:1
position: 2051075
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC119425251
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 451745
gene: LOC119425251
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: collagen alpha-3(IX) chain
translation: MKGHMGVPGEPGKDGKPGDKGDAGEPGSQGAPGHIGDDGQRGPIGFPGTPGEKGDRGPPGYNGAPGPTGPPGAPGVEGIRGRLGLPGSKGDDGAVGPQGLQGVPGEKGDSGEPGKDGADGLPGADGEKGEPGAPGGVGIRGMVGIPGLPGKQGVVGPPGEKGETGTEGPTGPVGLPGKTGEPGKDGVDGKPGEQGATGDTGKQGPAGPTGPPGLQGVKGDKGSTGAKGMKGHTGQKGDQGHIGPAGPKGSQGDPGLAGDSGVKGDQGPPGVPGIKGERGEKGNRGATGADGRPGQPGHEGATGPMGARGLEGEPGLAGPPGPRGLPGPKVSDEKLREMCSAVVEEQLQEFMKEMLKRPAAISAPGTPGPAGPPGLPGPAGVAGPTGTPGPMGPKGHPGFYGLPGAPGEKGEAGGKGAKGDKGEDGVGIKGSPGAPGIPGVPGPPGIGKDGKNGERGETGSPGIPGPAGPRGLSGQPGLCDPSTCINRHPPLYMISGKKSSTYK
SIO_010081: LOC119425251
subclass of: SO_0000673
so part of: LOC119425251
location: join(2022378..2022383,2023609..2023662,2023824..2023877,2023995..2024048,2024116..2024169,2024261..2024314,2024393..2024446,2024532..2024585,2025191..2025244,2028796..2028840,2028989..2029042,2029131..2029184,2029337..2029390,2031148..2031219,2031321..2031356,2031429..2031473,2033431..2033463,2033662..2033808,2041783..2041837,2042581..2042775,2043496..2043582,2051075..2051271)
location: region:2022378-2051271:1
so has part: feature:2022378-2022383:1:exon
so has part: feature:2023609-2023662:1:exon
so has part: feature:2023824-2023877:1:exon
so has part: feature:2023995-2024048:1:exon
so has part: feature:2024116-2024169:1:exon
so has part: feature:2024261-2024314:1:exon
so has part: feature:2024393-2024446:1:exon
so has part: feature:2024532-2024585:1:exon
so has part: feature:2025191-2025244:1:exon
so has part: feature:2028796-2028840:1:exon
so has part: feature:2028989-2029042:1:exon
so has part: feature:2029131-2029184:1:exon
so has part: feature:2029337-2029390:1:exon
so has part: feature:2031148-2031219:1:exon
so has part: feature:2031321-2031356:1:exon
so has part: feature:2031429-2031473:1:exon
so has part: feature:2033431-2033463:1:exon
so has part: feature:2033662-2033808:1:exon
so has part: feature:2041783-2041837:1:exon
so has part: feature:2042581-2042775:1:exon
so has part: feature:2043496-2043582:1:exon
so has part: feature:2051075-2051271:1:exon

XP_037548704.1
type: Protein
SIO_000068: ncbiprotein

position:2022378:1
position: 2022378
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2051271:1
position: 2051271
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2022378-2022383:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2023609-2023662:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2023824-2023877:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2023995-2024048:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2024116-2024169:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2024261-2024314:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2024393-2024446:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2024532-2024585:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2025191-2025244:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2028796-2028840:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2028989-2029042:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2029131-2029184:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2029337-2029390:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2031148-2031219:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2031321-2031356:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2031429-2031473:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:2033431-2033463:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:2033662-2033808:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:2041783-2041837:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:2042581-2042775:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:2043496-2043582:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:2051075-2051271:1:exon

col22a1
type: Gene
subclass of: SO_0000704
RO_0002162: 451745
gene: col22a1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2082135..2214279)
location: region:2082135-2214279:-1
so has part: feature:2082135-2214279:-1:exon
subclass of: SO_0000010

119425296
type: Gene
SIO_000068: ncbigene

position:2082135:-1
position: 2082135
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2214279:-1
position: 2214279
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2082135-2214279:-1:exon

col22a1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 451745
gene: col22a1
product: collagen, type XXII, alpha 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 66% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_037692817.1
SIO_010081: col22a1
subclass of: SO_0000673
so part of: col22a1
location: complement(join(2082135..2082328,2082410..2082487,2083461..2083643,2083755..2083821,2083908..2084087,2092274..2092318,2092413..2092448,2092540..2092611,2094002..2094055,2094184..2094237,2096713..2096766,2114285..2114329,2114416..2114469,2116515..2116568,2116659..2116712,2116889..2116942,2117072..2117125,2117215..2117268,2117454..2117507,2117800..2117913,2117987..2118022,2124038..2124082,2124474..2124527,2124597..2124632,2124704..2124781,2125154..2125198,2132851..2132955,2134883..2134936,2135054..2135107,2135189..2135242,2135323..2135376,2135566..2135619,2137710..2137742,2137861..2137902,2137994..2138047,2142033..2142095,2142173..2142217,2142351..2142404,2142715..2142768,2145972..2146025,2147696..2147749,2153906..2153959,2155774..2155827,2155967..2156020,2160086..2160115,2160484..2160519,2160896..2160949,2161481..2161534,2166435..2166479,2166565..2166618,2168194..2168247,2168332..2168385,2168488..2168541,2169970..2170008,2171447..2171509,2171598..2171642,2171749..2171865,2178476..2178556,2178653..2178928,2179083..2179206,2194942..2195053,2206080..2206160,2213541..2214107,2214189..2214279))
location: region:2082135-2214279:-1
so has part: feature:2214189-2214279:-1:exon
so has part: feature:2213541-2214107:-1:exon
so has part: feature:2206080-2206160:-1:exon
so has part: feature:2194942-2195053:-1:exon
so has part: feature:2179083-2179206:-1:exon
so has part: feature:2178653-2178928:-1:exon
so has part: feature:2178476-2178556:-1:exon
so has part: feature:2171749-2171865:-1:exon
so has part: feature:2171598-2171642:-1:exon
so has part: feature:2171447-2171509:-1:exon
so has part: feature:2169970-2170008:-1:exon
so has part: feature:2168488-2168541:-1:exon
so has part: feature:2168332-2168385:-1:exon
so has part: feature:2168194-2168247:-1:exon
so has part: feature:2166565-2166618:-1:exon
so has part: feature:2166435-2166479:-1:exon
so has part: feature:2161481-2161534:-1:exon
so has part: feature:2160896-2160949:-1:exon
so has part: feature:2160484-2160519:-1:exon
so has part: feature:2160086-2160115:-1:exon
so has part: feature:2155967-2156020:-1:exon
so has part: feature:2155774-2155827:-1:exon
so has part: feature:2153906-2153959:-1:exon
so has part: feature:2147696-2147749:-1:exon
so has part: feature:2145972-2146025:-1:exon
so has part: feature:2142715-2142768:-1:exon
so has part: feature:2142351-2142404:-1:exon
so has part: feature:2142173-2142217:-1:exon
so has part: feature:2142033-2142095:-1:exon
so has part: feature:2137994-2138047:-1:exon
so has part: feature:2137861-2137902:-1:exon
so has part: feature:2137710-2137742:-1:exon
so has part: feature:2135566-2135619:-1:exon
so has part: feature:2135323-2135376:-1:exon
so has part: feature:2135189-2135242:-1:exon
so has part: feature:2135054-2135107:-1:exon
so has part: feature:2134883-2134936:-1:exon
so has part: feature:2132851-2132955:-1:exon
so has part: feature:2125154-2125198:-1:exon
so has part: feature:2124704-2124781:-1:exon
so has part: feature:2124597-2124632:-1:exon
so has part: feature:2124474-2124527:-1:exon
so has part: feature:2124038-2124082:-1:exon
so has part: feature:2117987-2118022:-1:exon
so has part: feature:2117800-2117913:-1:exon
so has part: feature:2117454-2117507:-1:exon
so has part: feature:2117215-2117268:-1:exon
so has part: feature:2117072-2117125:-1:exon
so has part: feature:2116889-2116942:-1:exon
so has part: feature:2116659-2116712:-1:exon
so has part: feature:2116515-2116568:-1:exon
so has part: feature:2114416-2114469:-1:exon
so has part: feature:2114285-2114329:-1:exon
so has part: feature:2096713-2096766:-1:exon
so has part: feature:2094184-2094237:-1:exon
so has part: feature:2094002-2094055:-1:exon
so has part: feature:2092540-2092611:-1:exon
so has part: feature:2092413-2092448:-1:exon
so has part: feature:2092274-2092318:-1:exon
so has part: feature:2083908-2084087:-1:exon
so has part: feature:2083755-2083821:-1:exon
so has part: feature:2083461-2083643:-1:exon
so has part: feature:2082410-2082487:-1:exon
so has part: feature:2082135-2082328:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2214189-2214279:-1:exon

position:2214189:-1
position: 2214189
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2213541-2214107:-1:exon

position:2213541:-1
position: 2213541
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2214107:-1
position: 2214107
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2206080-2206160:-1:exon

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col22a1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 451745
gene: col22a1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: collagen alpha-1(XXII) chain
translation: MELRLGFRITLVWLILVLTLSSQRVEAQRAGCKNVHYDLAFILDTSSSVGKENFEKIRKWVVNLVDSFDVAPDKTRVAVVRFSDRPTTEFTLGQHKTLEHVKQAARNIGYLGGNTMTGDAISYTTSNIFTERNGARPSARGIQRVAILLTDGGSQDHVLEPSKAAVKAGIRMFAVGIGEALRVELEEIAAEPKKAHVFHVTDFNAIDKIRGRLRRRLCENVLCPNMKVQPDRFKPNSTSSGLAEVPGFDLMQYFSVKDILGTRDDDGQSSYVRLGTMPIVQHTEEVFSQGLPDEYAFVTTFKFRKTSRREDWYLWQIYDKYGIPQVSIRLDGENKAVEYNAVGLTKDAVRTVFKNPEVDSLFDRNWHKIALSVEAKSVSLYLDCKHIQTLPIEDREDIDIQGKTVIGKRLYDSVPIDFDLQRMMIYCDSKHAELETCCDLPTGPCPKKVVTEAPPVEILTPTPTVAEQKQGPEANCSCPAGKKGDIGAPGAAGPQGEKGDIGPKGAVGPAGIKGEKGETGDLNSVKGGRGVKGDRGSIGLTGPPGQKGEKGAGGIPGIDGLPGDKGDKGESGLPGVSGLPGPAGLKGIQGDAGISGAPGPKGVTGDSGVKGEDGTPGTNGLPGVDGLPGKPGDPGKDGLRGLVGAPGPSGIKGNKGERGLPGLPGDVVQQEGLRGERGEPGPSGPPGADGPPGPAGPPGPQGLPGEHGEPGQRGRKGENGLHGVDGLPGPPGPQGPAGPPGQTGQTGQPGLPGEMGRQGKVGEPGKSGVPGKDGLDGLIGNDGAMGPRGERGADGFPGKPGPKGDEGPPGPRGPPGERGEAGAPGQSGSDGVRGDRGVPGERGMDGPVGSKGEKGDKGDLGPRGPPGIPGNVAEIIPEPGEPGKPGEKGEKGDQGNPGDMGPKGLPGEQGFKGPPGPPGTKGDTGLNGETGRVGDPGPPGAPGPQGAAGLPGSVGIPGIIGPPGPAGQRGDKGELGKPGQSGPQGSPGEPGLIGAPGPPGKGKDGQNGEPGPPGIQGQPGAKGQQGPRGQIGVPGERGQPGEGKEGAPGPPGKHGAPGAAGLKGPPGLPGPQGPAGHNGLPGRPGEKGSPGEPGKAADLSDLNLKDVCSDCPAGPPGPPGLPGVPGDKGQNGPPGKNGEDGYQGPPGPTGPAGAPGTDGTKGVKGDQGPPGSPGEKGDKGHQGPPGRQGPPGLMGAPGNDGQPGPVGPTGPTGEKGKEGLKGIQGPPGLPGLIGQPGKMGKDGRPGEAGEPGKQGEPGPPGNPGLRGPQGFKGHRGEPGTLGTKGEDGKPGSPGRDGKPGNEGAKGPPGPEGLLGPRGEPGKPGESGPSGKSGLPGTPGLRGDKGEPGTPGLPGFSGPKGPAGPSGPIGPEGKQGIPGRAGDRGFKGEKGDHGIKGDKGQAGEPGMPGNPGPPGRKGHTGMMGMSGPPGEIGPPGTQGSSGNPGPPGPRGESVSMEQMRRLIQEELAKQLDAKLVYLMAQIQPAHVKSTAGRPGPPGPPGKDGSNGRPGPPGEPGMPGQNGGEGPRGPMGPKGEKGAKGEQGDTGIGERGERGPPGPIGPAGMPGYGKDGSPGQAGAQGEPGNPGPHGQPGPPGPAGQCDPTQCAYYASLAQRPHTKNVKGT
SIO_010081: col22a1
subclass of: SO_0000673
so part of: col22a1
location: complement(join(2082135..2082328,2082410..2082487,2083461..2083643,2083755..2083821,2083908..2084087,2092274..2092318,2092413..2092448,2092540..2092611,2094002..2094055,2094184..2094237,2096713..2096766,2114285..2114329,2114416..2114469,2116515..2116568,2116659..2116712,2116889..2116942,2117072..2117125,2117215..2117268,2117454..2117507,2117800..2117913,2117987..2118022,2124038..2124082,2124474..2124527,2124597..2124632,2124704..2124781,2125154..2125198,2132851..2132955,2134883..2134936,2135054..2135107,2135189..2135242,2135323..2135376,2135566..2135619,2137710..2137742,2137861..2137902,2137994..2138047,2142033..2142095,2142173..2142217,2142351..2142404,2142715..2142768,2145972..2146025,2147696..2147749,2153906..2153959,2155774..2155827,2155967..2156020,2160086..2160115,2160484..2160519,2160896..2160949,2161481..2161534,2166435..2166479,2166565..2166618,2168194..2168247,2168332..2168385,2168488..2168541,2169970..2170008,2171447..2171509,2171598..2171642,2171749..2171865,2178476..2178556,2178653..2178928,2179083..2179206,2194942..2195053,2206080..2206160,2213541..2214107,2214189..2214279))
location: region:2082135-2214279:-1
so has part: feature:2214189-2214279:-1:exon
so has part: feature:2213541-2214107:-1:exon
so has part: feature:2206080-2206160:-1:exon
so has part: feature:2194942-2195053:-1:exon
so has part: feature:2179083-2179206:-1:exon
so has part: feature:2178653-2178928:-1:exon
so has part: feature:2178476-2178556:-1:exon
so has part: feature:2171749-2171865:-1:exon
so has part: feature:2171598-2171642:-1:exon
so has part: feature:2171447-2171509:-1:exon
so has part: feature:2169970-2170008:-1:exon
so has part: feature:2168488-2168541:-1:exon
so has part: feature:2168332-2168385:-1:exon
so has part: feature:2168194-2168247:-1:exon
so has part: feature:2166565-2166618:-1:exon
so has part: feature:2166435-2166479:-1:exon
so has part: feature:2161481-2161534:-1:exon
so has part: feature:2160896-2160949:-1:exon
so has part: feature:2160484-2160519:-1:exon
so has part: feature:2160086-2160115:-1:exon
so has part: feature:2155967-2156020:-1:exon
so has part: feature:2155774-2155827:-1:exon
so has part: feature:2153906-2153959:-1:exon
so has part: feature:2147696-2147749:-1:exon
so has part: feature:2145972-2146025:-1:exon
so has part: feature:2142715-2142768:-1:exon
so has part: feature:2142351-2142404:-1:exon
so has part: feature:2142173-2142217:-1:exon
so has part: feature:2142033-2142095:-1:exon
so has part: feature:2137994-2138047:-1:exon
so has part: feature:2137861-2137902:-1:exon
so has part: feature:2137710-2137742:-1:exon
so has part: feature:2135566-2135619:-1:exon
so has part: feature:2135323-2135376:-1:exon
so has part: feature:2135189-2135242:-1:exon
so has part: feature:2135054-2135107:-1:exon
so has part: feature:2134883-2134936:-1:exon
so has part: feature:2132851-2132955:-1:exon
so has part: feature:2125154-2125198:-1:exon
so has part: feature:2124704-2124781:-1:exon
so has part: feature:2124597-2124632:-1:exon
so has part: feature:2124474-2124527:-1:exon
so has part: feature:2124038-2124082:-1:exon
so has part: feature:2117987-2118022:-1:exon
so has part: feature:2117800-2117913:-1:exon
so has part: feature:2117454-2117507:-1:exon
so has part: feature:2117215-2117268:-1:exon
so has part: feature:2117072-2117125:-1:exon
so has part: feature:2116889-2116942:-1:exon
so has part: feature:2116659-2116712:-1:exon
so has part: feature:2116515-2116568:-1:exon
so has part: feature:2114416-2114469:-1:exon
so has part: feature:2114285-2114329:-1:exon
so has part: feature:2096713-2096766:-1:exon
so has part: feature:2094184-2094237:-1:exon
so has part: feature:2094002-2094055:-1:exon
so has part: feature:2092540-2092611:-1:exon
so has part: feature:2092413-2092448:-1:exon
so has part: feature:2092274-2092318:-1:exon
so has part: feature:2083908-2084087:-1:exon
so has part: feature:2083755-2083821:-1:exon
so has part: feature:2083461-2083643:-1:exon
so has part: feature:2082410-2082487:-1:exon
so has part: feature:2082135-2082328:-1:exon

XP_037548745.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2214189-2214279:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2213541-2214107:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2206080-2206160:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2194942-2195053:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2179083-2179206:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2178653-2178928:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2178476-2178556:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2171749-2171865:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2171598-2171642:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2171447-2171509:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2169970-2170008:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2168488-2168541:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2168332-2168385:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2168194-2168247:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2166565-2166618:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2166435-2166479:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:2161481-2161534:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:2160896-2160949:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:2160484-2160519:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:2160086-2160115:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:2155967-2156020:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:2155774-2155827:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:2153906-2153959:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:2147696-2147749:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:2145972-2146025:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:2142715-2142768:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:2142351-2142404:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:2142173-2142217:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:2142033-2142095:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:2137994-2138047:-1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:2137861-2137902:-1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:2137710-2137742:-1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:2135566-2135619:-1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:2135323-2135376:-1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:2135189-2135242:-1:exon

urn:…
SIO_000300: 36
SIO_000628: feature:2135054-2135107:-1:exon

urn:…
SIO_000300: 37
SIO_000628: feature:2134883-2134936:-1:exon

urn:…
SIO_000300: 38
SIO_000628: feature:2132851-2132955:-1:exon

urn:…
SIO_000300: 39
SIO_000628: feature:2125154-2125198:-1:exon

urn:…
SIO_000300: 40
SIO_000628: feature:2124704-2124781:-1:exon

urn:…
SIO_000300: 41
SIO_000628: feature:2124597-2124632:-1:exon

urn:…
SIO_000300: 42
SIO_000628: feature:2124474-2124527:-1:exon

urn:…
SIO_000300: 43
SIO_000628: feature:2124038-2124082:-1:exon

urn:…
SIO_000300: 44
SIO_000628: feature:2117987-2118022:-1:exon

urn:…
SIO_000300: 45
SIO_000628: feature:2117800-2117913:-1:exon

urn:…
SIO_000300: 46
SIO_000628: feature:2117454-2117507:-1:exon

urn:…
SIO_000300: 47
SIO_000628: feature:2117215-2117268:-1:exon

urn:…
SIO_000300: 48
SIO_000628: feature:2117072-2117125:-1:exon

urn:…
SIO_000300: 49
SIO_000628: feature:2116889-2116942:-1:exon

urn:…
SIO_000300: 50
SIO_000628: feature:2116659-2116712:-1:exon

urn:…
SIO_000300: 51
SIO_000628: feature:2116515-2116568:-1:exon

urn:…
SIO_000300: 52
SIO_000628: feature:2114416-2114469:-1:exon

urn:…
SIO_000300: 53
SIO_000628: feature:2114285-2114329:-1:exon

urn:…
SIO_000300: 54
SIO_000628: feature:2096713-2096766:-1:exon

urn:…
SIO_000300: 55
SIO_000628: feature:2094184-2094237:-1:exon

urn:…
SIO_000300: 56
SIO_000628: feature:2094002-2094055:-1:exon

urn:…
SIO_000300: 57
SIO_000628: feature:2092540-2092611:-1:exon

urn:…
SIO_000300: 58
SIO_000628: feature:2092413-2092448:-1:exon

urn:…
SIO_000300: 59
SIO_000628: feature:2092274-2092318:-1:exon

urn:…
SIO_000300: 60
SIO_000628: feature:2083908-2084087:-1:exon

urn:…
SIO_000300: 61
SIO_000628: feature:2083755-2083821:-1:exon

urn:…
SIO_000300: 62
SIO_000628: feature:2083461-2083643:-1:exon

urn:…
SIO_000300: 63
SIO_000628: feature:2082410-2082487:-1:exon

urn:…
SIO_000300: 64
SIO_000628: feature:2082135-2082328:-1:exon

kcnk9
type: Gene
subclass of: SO_0000704
RO_0002162: 451745
gene: kcnk9
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2304215..2407996)
location: region:2304215-2407996:-1
so has part: feature:2304215-2407996:-1:exon
subclass of: SO_0000010

119426175
type: Gene
SIO_000068: ncbigene

position:2304215:-1
position: 2304215
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2407996:-1
position: 2407996
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2304215-2407996:-1:exon

kcnk9
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 451745
gene: kcnk9
product: potassium channel, subfamily K, member 9
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 34 Proteins, and 18% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_037693746.1
SIO_010081: kcnk9
subclass of: SO_0000673
so part of: kcnk9
location: complement(join(2304215..2305119,2407699..2407996))
location: region:2304215-2407996:-1
so has part: feature:2407699-2407996:-1:exon
so has part: feature:2304215-2305119:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2407699-2407996:-1:exon

position:2407699:-1
position: 2407699
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2304215-2305119:-1:exon

position:2305119:-1
position: 2305119
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

kcnk9
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 451745
gene: kcnk9
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: potassium channel subfamily K member 9
translation: MKRQNVRTLSLIVCTFTYLLVGAAVFDALESEFEMREKEQLEAEERRLQGKYNISEDDYRKLESIIMEAEPHRAGVQWKFAGSFYFAITVITTIGYGHAAPGTDAGKAFCMFYAVLGIPLTLVMFQSLGERMNTFVKYLLKRIKKCCGMSITDVSMENMVTVGFFSCIGTLCIGAAAFSHYEDWSFFQSYYYCFITLTTIGFGDFVALQKNRALQKKPLYVAFSFMYILVGLTVIGAFLNLVVLRFLTMNSEDERRDAEERASLAGNRNSMIIHIQDESLQRGQRRREPYRGEVTDLQSVCSCIHYHPHDYGSSGGGMGGLGCAFSHQNSFSPQLNPNQFFHSVSYRIEEISPSTLKNSLLPSPISSISPGPHSFTDNHQLTRRRKSV
SIO_010081: kcnk9
subclass of: SO_0000673
so part of: kcnk9
location: complement(join(2304236..2305119,2407699..2407981))
location: region:2304236-2407981:-1
so has part: feature:2407699-2407981:-1:exon
so has part: feature:2304236-2305119:-1:exon

XP_037549674.1
type: Protein
SIO_000068: ncbiprotein

position:2304236:-1
position: 2304236
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2407981:-1
position: 2407981
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2407699-2407981:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2304236-2305119:-1:exon

LOC119426017
type: Gene
subclass of: SO_0000704
RO_0002162: 451745
gene: LOC119426017
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2497844..3003179)
location: region:2497844-3003179:-1
so has part: feature:2497844-3003179:-1:exon
subclass of: SO_0000010

119426017
type: Gene
SIO_000068: ncbigene

position:2497844:-1
position: 2497844
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3003179:-1
position: 3003179
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2497844-3003179:-1:exon

LOC119426017
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 451745
gene: LOC119426017
product: trafficking protein particle complex subunit 9
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 78% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_037693579.1
SIO_010081: LOC119426017
subclass of: SO_0000673
so part of: LOC119426017
location: complement(join(2497844..2498776,2501590..2501813,2551517..2551986,2624727..2624942,2719521..2719631,2755912..2756054,2818142..2818260,2911473..2911625,3003021..3003179))
location: region:2497844-3003179:-1
so has part: feature:3003021-3003179:-1:exon
so has part: feature:2911473-2911625:-1:exon
so has part: feature:2818142-2818260:-1:exon
so has part: feature:2755912-2756054:-1:exon
so has part: feature:2719521-2719631:-1:exon
so has part: feature:2624727-2624942:-1:exon
so has part: feature:2551517-2551986:-1:exon
so has part: feature:2501590-2501813:-1:exon
so has part: feature:2497844-2498776:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3003021-3003179:-1:exon

position:3003021:-1
position: 3003021
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2911473-2911625:-1:exon

position:2911473:-1
position: 2911473
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2911625:-1
position: 2911625
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2818142-2818260:-1:exon

position:2818142:-1
position: 2818142
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2818260:-1
position: 2818260
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2755912-2756054:-1:exon

position:2755912:-1
position: 2755912
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2756054:-1
position: 2756054
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2719521-2719631:-1:exon

position:2719521:-1
position: 2719521
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2719631:-1
position: 2719631
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2624727-2624942:-1:exon

position:2624727:-1
position: 2624727
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2624942:-1
position: 2624942
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:2551517-2551986:-1:exon

position:2551517:-1
position: 2551517
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2551986:-1
position: 2551986
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:2501590-2501813:-1:exon

position:2501590:-1
position: 2501590
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2501813:-1
position: 2501813
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:2497844-2498776:-1:exon

position:2498776:-1
position: 2498776
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC119426017
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 451745
gene: LOC119426017
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: trafficking protein particle complex subunit 9
translation: MSKEELSSFVSVPLFNGETQQLTITLENIGSEEIETLELTSKIANTKEKVFGNFLSWDLEETLGHLPLKPGHTVTLTISIRVKLDFSGQENLLQDLNDDGISVTGLHVCSPFRQVLKPRSETKSVSSESGKAEYSHIKTLEAVLNFKYSGGTGKVEGYYRELTLGVHVDVEPSVFFTRVSTLPATSTRQCHLLLDIFNPTEHELTVSARNSQDLVLHASECQRMAIQVDKLDFESVPQLDQEAAHFTNPKQLEEELQQAQSCQINSKLDICWSIISFHRQTGPHSNRKALDHLTKDCSWQSWVLLHLTAESRIKCRIESRIKCRIESRIEHRIESRIERRIESRIERRIESCIERRIQCRIQCRIESRIKCRIESRIKCRIESRIKCRIESRIKCRIESRIESRIKCRIESRIKCRIESRIESRIKCCIESRIKCRIESRIKCRIESRIKCHVLVDGKPCDSDVLADCKVGDAVTLEIKLTNLSKNAVGPLALTVMPYQDYQNGVQNYDLEEAVTFVGSNTFFIEMVQPKENSVCKGALILLYTGDYFLNIKFQDDSTQRELPLAWFTLPSVHIRALDTPLQAGA
SIO_010081: LOC119426017
subclass of: SO_0000673
so part of: LOC119426017
location: complement(join(2498597..2498776,2501590..2501813,2551517..2551986,2624727..2624942,2719521..2719631,2755912..2756054,2818142..2818260,2911473..2911625,3003021..3003162))
location: region:2498597-3003162:-1
so has part: feature:3003021-3003162:-1:exon
so has part: feature:2911473-2911625:-1:exon
so has part: feature:2818142-2818260:-1:exon
so has part: feature:2755912-2756054:-1:exon
so has part: feature:2719521-2719631:-1:exon
so has part: feature:2624727-2624942:-1:exon
so has part: feature:2551517-2551986:-1:exon
so has part: feature:2501590-2501813:-1:exon
so has part: feature:2498597-2498776:-1:exon

XP_037549507.1
type: Protein
SIO_000068: ncbiprotein

position:2498597:-1
position: 2498597
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3003162:-1
position: 3003162
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3003021-3003162:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2911473-2911625:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2818142-2818260:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2755912-2756054:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2719521-2719631:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2624727-2624942:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2551517-2551986:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2501590-2501813:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2498597-2498776:-1:exon

LOC119425317
type: Gene
subclass of: SO_0000704
RO_0002162: 451745
gene: LOC119425317
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(3114858..3163741)
location: region:3114858-3163741:-1
so has part: feature:3114858-3163741:-1:exon
subclass of: SO_0000010

119425317
type: Gene
SIO_000068: ncbigene

position:3114858:-1
position: 3114858
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3163741:-1
position: 3163741
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3114858-3163741:-1:exon

LOC119425317
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 451745
gene: LOC119425317
product: trafficking protein particle complex subunit 9
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_037692838.1
SIO_010081: LOC119425317
subclass of: SO_0000673
so part of: LOC119425317
location: complement(join(3114858..3115070,3128463..3128584,3137709..3137735,3159156..3159281,3163601..3163741))
location: region:3114858-3163741:-1
so has part: feature:3163601-3163741:-1:exon
so has part: feature:3159156-3159281:-1:exon
so has part: feature:3137709-3137735:-1:exon
so has part: feature:3128463-3128584:-1:exon
so has part: feature:3114858-3115070:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3163601-3163741:-1:exon

position:3163601:-1
position: 3163601
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3159156-3159281:-1:exon

position:3159156:-1
position: 3159156
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3159281:-1
position: 3159281
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3137709-3137735:-1:exon

position:3137709:-1
position: 3137709
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3137735:-1
position: 3137735
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3128463-3128584:-1:exon

position:3128463:-1
position: 3128463
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3128584:-1
position: 3128584
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:3114858-3115070:-1:exon

position:3115070:-1
position: 3115070
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC119425317
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 451745
gene: LOC119425317
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: trafficking protein particle complex subunit 9
translation: MRKHVGDLCLQAGMLQDALVHYHMAVELLRAVNDFLWLGAALEGLCSASVIFHYPGGTAGKMVGRKPSISQAVDAGKRHRPGAQEVLIDPGALTTNGISADTSSEIGRAKNCLSSEDIIEKYKEAISCYGKYKNAGVIELEACVKAVRVLAIQKRAREASEFLQNAVYINLGQVCWLTRKPQLI
SIO_010081: LOC119425317
subclass of: SO_0000673
so part of: LOC119425317
location: complement(join(3114909..3115070,3128463..3128584,3137709..3137735,3159156..3159281,3163601..3163718))
location: region:3114909-3163718:-1
so has part: feature:3163601-3163718:-1:exon
so has part: feature:3159156-3159281:-1:exon
so has part: feature:3137709-3137735:-1:exon
so has part: feature:3128463-3128584:-1:exon
so has part: feature:3114909-3115070:-1:exon

XP_037548766.1
type: Protein
SIO_000068: ncbiprotein

position:3114909:-1
position: 3114909
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3163718:-1
position: 3163718
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3163601-3163718:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3159156-3159281:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3137709-3137735:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3128463-3128584:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3114909-3115070:-1:exon

LOC119426019
type: Gene
subclass of: SO_0000704
RO_0002162: 451745
gene: LOC119426019
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(3186689..3195353)
location: region:3186689-3195353:-1
so has part: feature:3186689-3195353:-1:exon
subclass of: SO_0000010

119426019
type: Gene
SIO_000068: ncbigene

position:3186689:-1
position: 3186689
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3195353:-1
position: 3195353
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3186689-3195353:-1:exon

LOC119426019
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 451745
gene: LOC119426019
product: SH3 domain-binding glutamic acid-rich-like protein 3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 Proteins, and 84% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_037693580.1
SIO_010081: LOC119426019
subclass of: SO_0000673
so part of: LOC119426019
location: complement(join(3186689..3186928,3195223..3195353))
location: region:3186689-3195353:-1
so has part: feature:3195223-3195353:-1:exon
so has part: feature:3186689-3186928:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3195223-3195353:-1:exon

position:3195223:-1
position: 3195223
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3186689-3186928:-1:exon

position:3186928:-1
position: 3186928
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC119426019
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 451745
gene: LOC119426019
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: SH3 domain-binding glutamic acid-rich-like protein 3
translation: MGVKLYYTTVTASRTVKSQQAEVIRILDSKSIQYELIDISVGGELRDEMRSKAGDPTAVPPQLFNEDQYCGVRGHISSDSRSGENISAHFLSDN
SIO_010081: LOC119426019
subclass of: SO_0000673
so part of: LOC119426019
location: complement(join(3186689..3186928,3195223..3195267))
location: region:3186689-3195267:-1
so has part: feature:3195223-3195267:-1:exon
so has part: feature:3186689-3186928:-1:exon

XP_037549508.1
type: Protein
SIO_000068: ncbiprotein

position:3195267:-1
position: 3195267
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3195223-3195267:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3186689-3186928:-1:exon

LOC119426020
type: Gene
subclass of: SO_0000704
RO_0002162: 451745
gene: LOC119426020
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(3209984..3211545)
location: region:3209984-3211545:-1
so has part: feature:3209984-3211545:-1:exon
subclass of: SO_0000010

119426020
type: Gene
SIO_000068: ncbigene

position:3209984:-1
position: 3209984
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3211545:-1
position: 3211545
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3209984-3211545:-1:exon

LOC119426020
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 451745
gene: LOC119426020
product: membrane progestin receptor alpha-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 44 Proteins
transcript id: XM_037693581.1
SIO_010081: LOC119426020
subclass of: SO_0000673
so part of: LOC119426020
location: complement(join(3209984..3210609,3211245..3211545))
location: region:3209984-3211545:-1
so has part: feature:3211245-3211545:-1:exon
so has part: feature:3209984-3210609:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3211245-3211545:-1:exon

position:3211245:-1
position: 3211245
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3209984-3210609:-1:exon

position:3210609:-1
position: 3210609
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC119426020
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 451745
gene: LOC119426020
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: membrane progestin receptor alpha-like
translation: MATIVMESIGRVFISLQQIRQVPRMLREAAPSMPSTVRDIEVPPFFRERFICTGYRPLDQSWRYYFLSLFQRHNETINIWTHLLAFFLFLVKLRDLANTVDFISDPHSWPLLILIMSSLTYSVFSVTAHLLGGRSELCHYSFYFLDYVGVAQYQYGSAVVHFYYVVDESLHSSVCGLFMPTAAALSFLSCLGCCYGKYSSHSLSSGVRKVCQVVPSALAYIWDSSPVAKRLLSGSNNDPAIAYHFGQVGFFLSCAFFFTFPLLERYLPGRCDFVGQSHQVFHVLLSCCTFCQINASYLSGFDGQERTQ
SIO_010081: LOC119426020
subclass of: SO_0000673
so part of: LOC119426020
location: complement(join(3209984..3210609,3211245..3211545))
location: region:3209984-3211545:-1
so has part: feature:3211245-3211545:-1:exon
so has part: feature:3209984-3210609:-1:exon

XP_037549509.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3211245-3211545:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3209984-3210609:-1:exon

tmem222b
type: Gene
subclass of: SO_0000704
RO_0002162: 451745
gene: tmem222b
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 3269796..3297477
location: region:3269796-3297477:1
so has part: feature:3269796-3297477:1:exon
subclass of: SO_0000010

119425291
type: Gene
SIO_000068: ncbigene

position:3269796:1
position: 3269796
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3297477:1
position: 3297477
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3269796-3297477:1:exon

tmem222b
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 451745
gene: tmem222b
product: transmembrane protein 222b
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 Proteins, and 83% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_037692813.1
SIO_010081: tmem222b
subclass of: SO_0000673
so part of: tmem222b
location: join(3269796..3269937,3274710..3274794,3288020..3288051,3288144..3288240,3288316..3288446,3297188..3297477)
location: region:3269796-3297477:1
so has part: feature:3269796-3269937:1:exon
so has part: feature:3274710-3274794:1:exon
so has part: feature:3288020-3288051:1:exon
so has part: feature:3288144-3288240:1:exon
so has part: feature:3288316-3288446:1:exon
so has part: feature:3297188-3297477:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3269796-3269937:1:exon

position:3269937:1
position: 3269937
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3274710-3274794:1:exon

position:3274710:1
position: 3274710
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3274794:1
position: 3274794
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3288020-3288051:1:exon

position:3288020:1
position: 3288020
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3288051:1
position: 3288051
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3288144-3288240:1:exon

position:3288144:1
position: 3288144
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3288240:1
position: 3288240
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:3288316-3288446:1:exon

position:3288316:1
position: 3288316
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3288446:1
position: 3288446
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:3297188-3297477:1:exon

position:3297188:1
position: 3297188
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

tmem222b
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 451745
gene: tmem222b
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transmembrane protein 222
translation: MADVVENDSMKNYKIASEKISPEACRYPFCVVWTPIPFLSWLFPIIGHMGICTSTGVIRDFAGPYFVSEDNMAFGKPTKYWMLDVSKVYSNGCNAWDRAVHDASEEYKHRMHNLCCDNCHSHVAMALNLMQYENSTSWNMVNLCLLAFIHGKYVSCAGFLKTWLPFMMLAGIILTVALAVYLR
SIO_010081: tmem222b
subclass of: SO_0000673
so part of: tmem222b
location: join(3269819..3269937,3274710..3274794,3288020..3288051,3288144..3288240,3288316..3288446,3297188..3297275)
location: region:3269819-3297275:1
so has part: feature:3269819-3269937:1:exon
so has part: feature:3274710-3274794:1:exon
so has part: feature:3288020-3288051:1:exon
so has part: feature:3288144-3288240:1:exon
so has part: feature:3288316-3288446:1:exon
so has part: feature:3297188-3297275:1:exon

XP_037548741.1
type: Protein
SIO_000068: ncbiprotein

position:3269819:1
position: 3269819
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3297275:1
position: 3297275
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3269819-3269937:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3274710-3274794:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3288020-3288051:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3288144-3288240:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3288316-3288446:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3297188-3297275:1:exon

tpbga
type: Gene
subclass of: SO_0000704
RO_0002162: 451745
gene: tpbga
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 3362730..3364047
location: region:3362730-3364047:1
so has part: feature:3362730-3364047:1:exon
subclass of: SO_0000010

119425358
type: Gene
SIO_000068: ncbigene

position:3362730:1
position: 3362730
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3364047:1
position: 3364047
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3362730-3364047:1:exon

tpbga
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 451745
gene: tpbga
product: trophoblast glycoprotein a
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 19 Proteins, and 87% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_037692879.1
SIO_010081: tpbga
subclass of: SO_0000673
so part of: tpbga
location: join(3362730..3362983,3363052..3364047)
location: region:3362730-3364047:1
so has part: feature:3362730-3362983:1:exon
so has part: feature:3363052-3364047:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3362730-3362983:1:exon

position:3362983:1
position: 3362983
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3363052-3364047:1:exon

position:3363052:1
position: 3363052
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

tpbga
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 451745
gene: tpbga
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: trophoblast glycoprotein a
translation: MQVLTRRLVLCALLSSVYATCPPRCECSEAAQTVKCVSKDLRAVPTGIPGYTKNLFITGNQISRIGPESFTGLDHVSTLSLTNNRISEVESHSFAGLTRLRSLDLSNNQLTVIYPEAFTILNQSLRELNLSRALYNHSSVMDLATALRWSSLGTLQVLDLSDNSLVDLPPRVFYHLSDLRKLQLSNNSLVGFYNSTLSGLEHLEELDLTLNAFKTLREEALRELDSLPGATVLLGENPFTCTCGIELFAMWLNRSQDRVRDSESLLCTFPAGLRNTSILSVGSLTLGCYHRDARAELALQTSYVFLGIVLGFIGLIFLFVLYLNRRGIKKRVYDMRDACREVWEGYHYHFEADSDPRLSQVCTNVEQ
SIO_010081: tpbga
subclass of: SO_0000673
so part of: tpbga
location: join(3362730..3362983,3363052..3363901)
location: region:3362730-3363901:1
so has part: feature:3362730-3362983:1:exon
so has part: feature:3363052-3363901:1:exon

XP_037548807.1
type: Protein
SIO_000068: ncbiprotein

position:3363901:1
position: 3363901
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3362730-3362983:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3363052-3363901:1:exon

LOC119426022
type: Gene
subclass of: SO_0000704
RO_0002162: 451745
gene: LOC119426022
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(3375246..3443898)
location: region:3375246-3443898:-1
so has part: feature:3375246-3443898:-1:exon
subclass of: SO_0000010

119426022
type: Gene
SIO_000068: ncbigene

position:3375246:-1
position: 3375246
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3443898:-1
position: 3443898
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3375246-3443898:-1:exon

LOC119426022
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 451745
gene: LOC119426022
product: nuclear migration protein nudC
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 58% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_037693584.1
SIO_010081: LOC119426022
subclass of: SO_0000673
so part of: LOC119426022
location: complement(join(3375246..3375473,3376530..3376799,3400845..3400958,3441859..3441933,3442016..3442225,3442330..3442407,3443650..3443898))
location: region:3375246-3443898:-1
so has part: feature:3443650-3443898:-1:exon
so has part: feature:3442330-3442407:-1:exon
so has part: feature:3442016-3442225:-1:exon
so has part: feature:3441859-3441933:-1:exon
so has part: feature:3400845-3400958:-1:exon
so has part: feature:3376530-3376799:-1:exon
so has part: feature:3375246-3375473:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3443650-3443898:-1:exon

position:3443650:-1
position: 3443650
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3442330-3442407:-1:exon

position:3442330:-1
position: 3442330
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3442407:-1
position: 3442407
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3442016-3442225:-1:exon

position:3442016:-1
position: 3442016
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3442225:-1
position: 3442225
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3441859-3441933:-1:exon

position:3441859:-1
position: 3441859
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3441933:-1
position: 3441933
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:3400845-3400958:-1:exon

position:3400845:-1
position: 3400845
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3400958:-1
position: 3400958
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:3376530-3376799:-1:exon

position:3376530:-1
position: 3376530
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3376799:-1
position: 3376799
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:3375246-3375473:-1:exon

position:3375473:-1
position: 3375473
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC119426022
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 451745
gene: LOC119426022
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: nuclear migration protein nudC
translation: MGEEEEKYDGMLLVMAQQHEGGVQELVNTFFSFLRRKTDFFIGGDAGAPEKLVRDAFDHHSKLALKAHKEKRVKQEMEKKQKAERAAKLAEEERKKKSNEEPRIQELTDEEAEKLQSELNEKKKEEEKLKNVTSAEKTSEESEKEKSDSEGEEDEKDKDKLKPNSGNGADLPNYKWTQTLSEVDRFIHPLRVAIPSLVDFADWLEYELEVQEDSMKPPKREELFNKKPDTKHTPKPSSKTATILLGTEKVSGSSNVAAPSAPGHPPNRSKGVEKNMPLLKATPEAVLPLLRGIEKRLTKSPEQAATYQREIDKLVESGYVVKPVEHQLETSGEAWYIPIIWFNIMERTE
SIO_010081: LOC119426022
subclass of: SO_0000673
so part of: LOC119426022
location: complement(join(3375246..3375473,3376530..3376799,3400845..3400958,3441859..3441933,3442016..3442225,3442330..3442407,3443650..3443724))
location: region:3375246-3443724:-1
so has part: feature:3443650-3443724:-1:exon
so has part: feature:3442330-3442407:-1:exon
so has part: feature:3442016-3442225:-1:exon
so has part: feature:3441859-3441933:-1:exon
so has part: feature:3400845-3400958:-1:exon
so has part: feature:3376530-3376799:-1:exon
so has part: feature:3375246-3375473:-1:exon

XP_037549512.1
type: Protein
SIO_000068: ncbiprotein

position:3443724:-1
position: 3443724
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3443650-3443724:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3442330-3442407:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3442016-3442225:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3441859-3441933:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3400845-3400958:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3376530-3376799:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3375246-3375473:-1:exon

LOC119426023
type: Gene
subclass of: SO_0000704
RO_0002162: 451745
gene: LOC119426023
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 3455272..3456212
location: region:3455272-3456212:1
so has part: feature:3455272-3456212:1:exon
subclass of: SO_0000010

119426023
type: Gene
SIO_000068: ncbigene

position:3455272:1
position: 3455272
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3456212:1
position: 3456212
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3455272-3456212:1:exon

LOC119426023
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 451745
gene: LOC119426023
product: nuclear migration protein nudC-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 93% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_037693585.1
SIO_010081: LOC119426023
subclass of: SO_0000673
so part of: LOC119426023
location: join(3455272..3455493,3455580..3455663,3456090..3456212)
location: region:3455272-3456212:1
so has part: feature:3455272-3455493:1:exon
so has part: feature:3455580-3455663:1:exon
so has part: feature:3456090-3456212:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3455272-3455493:1:exon

position:3455493:1
position: 3455493
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3455580-3455663:1:exon

position:3455580:1
position: 3455580
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3455663:1
position: 3455663
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3456090-3456212:1:exon

position:3456090:1
position: 3456090
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC119426023
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 451745
gene: LOC119426023
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: nuclear migration protein nudC-like
translation: MKTFLVVPQLILPFDVKFRIKGRDVVVDIQRRSIKVGLKGHPPVIDGQLYNEVKVEESSWLIDDGKVVAVHLEKINKMEWWSRIVTTDPELNTKKICPENSKLSDLDGETRGMVEKMMYDQRQKSMGLPTSEEQKKQDILKK
SIO_010081: LOC119426023
subclass of: SO_0000673
so part of: LOC119426023
location: join(3455272..3455493,3455580..3455663,3456090..3456212)
location: region:3455272-3456212:1
so has part: feature:3455272-3455493:1:exon
so has part: feature:3455580-3455663:1:exon
so has part: feature:3456090-3456212:1:exon

XP_037549513.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3455272-3455493:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3455580-3455663:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3456090-3456212:1:exon

LOC119426024
type: Gene
subclass of: SO_0000704
RO_0002162: 451745
gene: LOC119426024
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: 3500701..3501166
location: region:3500701-3501166:1
so has part: feature:3500701-3501166:1:exon

119426024
type: Gene
SIO_000068: ncbigene

position:3500701:1
position: 3500701
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3501166:1
position: 3501166
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3500701-3501166:1:exon

LOC119426024
type: Exon
subclass of: SO_0000147
RO_0002162: 451745
gene: LOC119426024
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 267 Proteins, and 44% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC119426024
subclass of: SO_0000673
so part of: LOC119426024
location: 3500701..3501166
location: region:3500701-3501166:1
so has part: feature:3500701-3501166:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3500701-3501166:1:exon

LOC119425944
type: Gene
subclass of: SO_0000704
RO_0002162: 451745
gene: LOC119425944
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(3534480..3607244)
location: region:3534480-3607244:-1
so has part: feature:3534480-3607244:-1:exon
subclass of: SO_0000010

119425944
type: Gene
SIO_000068: ncbigene

position:3534480:-1
position: 3534480
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3607244:-1
position: 3607244
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3534480-3607244:-1:exon

LOC119425944
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 451745
gene: LOC119425944
product: keratinocyte differentiation factor 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 68% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_037693501.1
SIO_010081: LOC119425944
subclass of: SO_0000673
so part of: LOC119425944
location: complement(join(3534480..3534568,3603075..3603158,3603254..3604150,3607145..3607244))
location: region:3534480-3607244:-1
so has part: feature:3607145-3607244:-1:exon
so has part: feature:3603254-3604150:-1:exon
so has part: feature:3603075-3603158:-1:exon
so has part: feature:3534480-3534568:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3607145-3607244:-1:exon

position:3607145:-1
position: 3607145
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3603254-3604150:-1:exon

position:3603254:-1
position: 3603254
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3604150:-1
position: 3604150
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3603075-3603158:-1:exon

position:3603075:-1
position: 3603075
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3603158:-1
position: 3603158
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3534480-3534568:-1:exon

position:3534568:-1
position: 3534568
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC119425944
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 451745
gene: LOC119425944
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: keratinocyte differentiation factor 1
translation: MSAGSIDSLRRSSSPWRQSQESFHEEHCMDMQPVPEPKLVHKSLLNDANGKESETISFIPGSAKPSNESQTCNPCFPQRSCKSLVCSVITCGLYRVCQRSIFTPCLAPNEKLPDEPEKVNLRAVNSGDTKEVVDTDWSDFRINGVKVTSPKKYLDIDTSLPTYAPSSGVQTQPGSLLPESMRFEDWEDGDGDVDSLITKKLLELYSEYQIEELARCTSDSLFVRKSKAITQLINSLAEEHKMNEQEAECRLVRGIIRISTRKNKKRPPSSRVEKMLSDSGNETMTASASFPESKNNNRSDPDFQISDLTSSDKFAREIWRNNGGHTLSSPTEYSSAHTQSSGVPLIRSSVRT
SIO_010081: LOC119425944
subclass of: SO_0000673
so part of: LOC119425944
location: complement(join(3534480..3534568,3603075..3603158,3603254..3604139))
location: region:3534480-3604139:-1
so has part: feature:3603254-3604139:-1:exon
so has part: feature:3603075-3603158:-1:exon
so has part: feature:3534480-3534568:-1:exon

XP_037549429.1
type: Protein
SIO_000068: ncbiprotein

position:3604139:-1
position: 3604139
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3603254-3604139:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3603075-3603158:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3534480-3534568:-1:exon

LOC119425345
type: Gene
subclass of: SO_0000704
RO_0002162: 451745
gene: LOC119425345
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: <3685489..3759488
location: region:3685489-3759488:1
so has part: feature:3685489-3759488:1:exon
subclass of: SO_0000010

119425345
type: Gene
SIO_000068: ncbigene

position:3685489:1
position: 3685489
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

position:3759488:1
position: 3759488
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3685489-3759488:1:exon

LOC119425345
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 451745
gene: LOC119425345
product: AT-rich interactive domain-containing protein 1A
inference: similar to RNA sequence (same species):INSD:GELZ01031002.1
exception: annotated by transcript or proteomic data
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: added 1245 bases not found in genome assembly; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 99% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_037692862.1
SIO_010081: LOC119425345
subclass of: SO_0000673
so part of: LOC119425345
location: join(<3685489..3685710,3733694..3734290,3759306..3759488)
location: region:3685489-3759488:1
so has part: feature:3685489-3685710:1:exon
so has part: feature:3733694-3734290:1:exon
so has part: feature:3759306-3759488:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3685489-3685710:1:exon

position:3685710:1
position: 3685710
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3733694-3734290:1:exon

position:3733694:1
position: 3733694
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3734290:1
position: 3734290
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3759306-3759488:1:exon

position:3759306:1
position: 3759306
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC119425345
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 451745
gene: LOC119425345
inference: similar to RNA sequence (same species):INSD:GELZ01031002.1
exception: annotated by transcript or proteomic data
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: added 867 bases not found in genome assembly; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: AT-rich interactive domain-containing protein 1A
translation: MAAQVASLNTSPPSELKKPDLDIQEGSVPGEKQHENKETGPDAGSPGQKEVQDGSDAAGGGDPDLKNGTGSVPRVNNTNSGTQSDSGGAEGNNLPGMGHQQPGPFAPPPYGYNQHYSRGPFQHGGQQSPGMAAASGPGLMDTYPPNSHEHGYHNNYGPFPSSRTCYQGQGYGPMSSPRSSQPPAAGGQPGKQQPAGGPAAPMAASYNIHRYNVGNQQPTSTPTLNQLLTSPSSVRSYPSYPQGDYNNQEGPGKGPGEVGSGQYGGWQQRTHHPPPMSPGTTGQPPSRTQPPSPMDQVGKIRGQPYGGPNPYSPHQQGPPGGPGPQQGSSYPGQGYGPPGPQRYPMGMQNRTTGAIGSMLYGQQISAYGQQGPGGYNQQNQGYYGQHGPPSHPSQQQPSYPGQTQGSSGTPYPQQGHPSQPSGQHGQPGTPYQQTQVTHGSVPSPSPYSQPPQSQPGQSLYAPPQQQPQQQQQGPGPQGQQGPQGQPGYPQTPGGAQPPQQPTPQQQQQGPLQQQAGGPPSQAQQPPGHVQQSQQSPYSQTPPLQQQQSQQQSPYQRFPPPPQELSQDSFSSQSSAPPSNQPNKAAQEDSMQGRPSSLPVRHLLLSGCLPL
SIO_010081: LOC119425345
subclass of: SO_0000673
so part of: LOC119425345
location: join(<3685489..3685710,3733694..3734290,3759306..3759452)
location: region:3685489-3759452:1
so has part: feature:3685489-3685710:1:exon
so has part: feature:3733694-3734290:1:exon
so has part: feature:3759306-3759452:1:exon

XP_037548790.1
type: Protein
SIO_000068: ncbiprotein

position:3759452:1
position: 3759452
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3685489-3685710:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3733694-3734290:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3759306-3759452:1:exon

LOC119426025
type: Gene
subclass of: SO_0000704
RO_0002162: 451745
gene: LOC119426025
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 3902338..4048043
location: region:3902338-4048043:1
so has part: feature:3902338-4048043:1:exon
subclass of: SO_0000010

119426025
type: Gene
SIO_000068: ncbigene

position:3902338:1
position: 3902338
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4048043:1
position: 4048043
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3902338-4048043:1:exon

LOC119426025
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 451745
gene: LOC119426025
product: AT-rich interactive domain-containing protein 1A
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 79% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_037693586.1
SIO_010081: LOC119426025
subclass of: SO_0000673
so part of: LOC119426025
location: join(3902338..3902404,3920548..3920718,3921040..3921340,3961660..3961805,3961899..3961996,3962079..3962288,3962399..3962603,3992367..3992490,4028686..4028861,4028969..4029098,4029174..4029293,4029455..4029551,4039841..4040660,4042580..4042710,4042803..4044683,4047930..4048043)
location: region:3902338-4048043:1
so has part: feature:3902338-3902404:1:exon
so has part: feature:3920548-3920718:1:exon
so has part: feature:3921040-3921340:1:exon
so has part: feature:3961660-3961805:1:exon
so has part: feature:3961899-3961996:1:exon
so has part: feature:3962079-3962288:1:exon
so has part: feature:3962399-3962603:1:exon
so has part: feature:3992367-3992490:1:exon
so has part: feature:4028686-4028861:1:exon
so has part: feature:4028969-4029098:1:exon
so has part: feature:4029174-4029293:1:exon
so has part: feature:4029455-4029551:1:exon
so has part: feature:4039841-4040660:1:exon
so has part: feature:4042580-4042710:1:exon
so has part: feature:4042803-4044683:1:exon
so has part: feature:4047930-4048043:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3902338-3902404:1:exon

position:3902404:1
position: 3902404
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3920548-3920718:1:exon

position:3920548:1
position: 3920548
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3920718:1
position: 3920718
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3921040-3921340:1:exon

position:3921040:1
position: 3921040
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3921340:1
position: 3921340
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3961660-3961805:1:exon

position:3961660:1
position: 3961660
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3961805:1
position: 3961805
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:3961899-3961996:1:exon

position:3961899:1
position: 3961899
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3961996:1
position: 3961996
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:3962079-3962288:1:exon

position:3962079:1
position: 3962079
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3962288:1
position: 3962288
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:3962399-3962603:1:exon

position:3962399:1
position: 3962399
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3962603:1
position: 3962603
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:3992367-3992490:1:exon

position:3992367:1
position: 3992367
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3992490:1
position: 3992490
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:4028686-4028861:1:exon

position:4028686:1
position: 4028686
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4028861:1
position: 4028861
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:4028969-4029098:1:exon

position:4028969:1
position: 4028969
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4029098:1
position: 4029098
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:4029174-4029293:1:exon

position:4029174:1
position: 4029174
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4029293:1
position: 4029293
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:4029455-4029551:1:exon

position:4029455:1
position: 4029455
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4029551:1
position: 4029551
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:4039841-4040660:1:exon

position:4039841:1
position: 4039841
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4040660:1
position: 4040660
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:4042580-4042710:1:exon

position:4042580:1
position: 4042580
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4042710:1
position: 4042710
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:4042803-4044683:1:exon

position:4042803:1
position: 4042803
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4044683:1
position: 4044683
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:4047930-4048043:1:exon

position:4047930:1
position: 4047930
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC119426025
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 451745
gene: LOC119426025
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: AT-rich interactive domain-containing protein 1A
translation: MPPRPPSVQSDSIMHSSMNQERVSMRNPQMPPYGSPGQPGSALSPRQSSGGQMHGGMGPYPQNNTMGNYGPQGGQYGPQCYPRQPGYTGMPNANYPSGPGMAGSMNPMAGQGSGGPYGNMPPGRLGPGQMAARPYGPNMSSNMGGMPPQVASGMCPPPGMNRKESGTSMHHGPSNSIPNRPPGYPNMSQGMMGAGSPYGPGLNSMHGVMNQGVPGPYPMGTNMANNTPGIAPSSEFSMDKINPTQKINNKVDGTPKPETKKKSNSSTITNEKITRLYELGPEPERKIWVDRYLTFAEEKAMGMNNLPAVGRKPLDLFRLYISVKEIGGLTQVNKNKKWRELATNLNVGTSSSAASSLKKQYIQCLYAFECKIERGEDPPPDFFNTDTKKNQTKVQPPSPAGSGSLQGPQTPQSTTSSMTEGGDLKPPTPASTPHSQMPSVRSSVNLQDPFADGSDPAFSRRNAMTPNSQGYQPGMGGSEMMSRMGPYESNKDPFGGMRKAGEQFMSPGPNSGMGEQYNRGPPGPMGNMPMGQRQQYPYGFDRRQEPGIGPEGSMGPGAPQPNMMPSGADPGMYSPSRPPSQQRHESYTNQYPGQGAPPGGPYPNQQPGMYPQQQSNYKRPVDGGYGPPAKRHEGEMYNVPYGSQQQPGPQPSGHPGQQDMYNQYNAYPGGDRRPPGSQNQFPFPFGRDRGPSSTGANSQSHMPSQMMGSSMPSGPDGPQGPVWQGRNEMGFPNYPNRQGPPVPGQGPGYHNMNRSEEMMPSDQRMNHEGQWPSHINQRQPPFGPTGTGPPMTRPLPSTFQTSQNHIPQVLSPAPMSRPMESRTSPSKSPYMHPGVKVQKAGPPVPASHIGQAPVQQPLIRRDVAFPPSSVEATQPHLKPRKRLTMKDIGTPEAWRVMMSLKSGLLAESTWALDTINILLYDDNSISTFNLCQLPGFLELIVEYFRCCLIEIFSILKEYEVGDPGQRILIDPNAAEDSEDDISIPEGEDMGTDEEDEEDEETEETKSNLDTSSLVQVKKEEEEHSLKDKSSEDEEEEKESSTKEASSSTSGSLQDPTVHLEKPKQASKFDKLPIKMVRKKNPFLANSLSKPGQRQSFNSGLIHWSVGGGDTTEHIQTHFESQMDLLKQWKHTSATIEGRKKNKAPAAATEIPEKSKSYGEDKAQQPSIQPSEAFPSLAEKTPSSLPIGAPVTATIDDVLSARPGSVTEEVVRGGAEEQKENGKFLFSINPDLQSRRNVKILEDEPHSKDEMPLSTLSDWKDSLARRCICVSNIVRSLSFVPGNDLEMSKHPGLLLLLGHLVLLHHRHPERKQAPVTYEKEEEEDEGVSCDRDEWWWDCLEVLRENCLVTLANISGQLDLSIYPESICLPLLDGLLHWAVCPSAEALDPFPTLGPHSSLSPQRLVLETLSKLSIQDNNVDLILATPPFSRLEKLYGLLVRLVGERKVAVCREMAVVLLANLAQGDSLAARAVAVQKGSVGNLLGFLEDSLAATQYQQSQSSLLQLQGSPQFEPTSMDMMRRAARALHALAKVEENHSEFTLYESRLLDISVSPLMNHLVSQVHSRFAKFLPRLGHQNRVEGPVPVTWTAHGHHICPFV
SIO_010081: LOC119426025
subclass of: SO_0000673
so part of: LOC119426025
location: join(3902338..3902404,3920548..3920718,3921040..3921340,3961660..3961805,3961899..3961996,3962079..3962288,3962399..3962603,3992367..3992490,4028686..4028861,4028969..4029098,4029174..4029293,4029455..4029551,4039841..4040660,4042580..4042710,4042803..4044683,4047930..4048043)
location: region:3902338-4048043:1
so has part: feature:3902338-3902404:1:exon
so has part: feature:3920548-3920718:1:exon
so has part: feature:3921040-3921340:1:exon
so has part: feature:3961660-3961805:1:exon
so has part: feature:3961899-3961996:1:exon
so has part: feature:3962079-3962288:1:exon
so has part: feature:3962399-3962603:1:exon
so has part: feature:3992367-3992490:1:exon
so has part: feature:4028686-4028861:1:exon
so has part: feature:4028969-4029098:1:exon
so has part: feature:4029174-4029293:1:exon
so has part: feature:4029455-4029551:1:exon
so has part: feature:4039841-4040660:1:exon
so has part: feature:4042580-4042710:1:exon
so has part: feature:4042803-4044683:1:exon
so has part: feature:4047930-4048043:1:exon

XP_037549514.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3902338-3902404:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3920548-3920718:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3921040-3921340:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3961660-3961805:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3961899-3961996:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3962079-3962288:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3962399-3962603:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3992367-3992490:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4028686-4028861:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4028969-4029098:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:4029174-4029293:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:4029455-4029551:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:4039841-4040660:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:4042580-4042710:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:4042803-4044683:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:4047930-4048043:1:exon

LOC119425994
type: Gene
subclass of: SO_0000704
RO_0002162: 451745
gene: LOC119425994
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 4087015..4088413
location: region:4087015-4088413:1
so has part: feature:4087015-4088413:1:exon
subclass of: SO_0000010

119425994
type: Gene
SIO_000068: ncbigene

position:4087015:1
position: 4087015
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4088413:1
position: 4088413
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4087015-4088413:1:exon

LOC119425994
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 451745
gene: LOC119425994
product: uncharacterized LOC119425994
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_037693554.1
SIO_010081: LOC119425994
subclass of: SO_0000673
so part of: LOC119425994
location: join(4087015..4087092,4087165..4087223,4087298..4088413)
location: region:4087015-4088413:1
so has part: feature:4087015-4087092:1:exon
so has part: feature:4087165-4087223:1:exon
so has part: feature:4087298-4088413:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4087015-4087092:1:exon

position:4087092:1
position: 4087092
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4087165-4087223:1:exon

position:4087165:1
position: 4087165
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4087223:1
position: 4087223
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4087298-4088413:1:exon

position:4087298:1
position: 4087298
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC119425994
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 451745
gene: LOC119425994
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC119425994
translation: MTCGLGLGILVVFLVQAELVCCLWTKGAQSFQNSNTYVGFQPDGSLIKSGSYPQNQVRQGFSPHSVQSRSFNAGPAVASGSGPGLSTRSSTQVVSQPAQSSVRLVKSSSVLKANKQRPFSLGSAAPQGARQSFAGGPSVIQTQKNPSISSRSWPTQQGTQRFSKYPSSSSRSLQASRGSYSFRSVSPQSAAQAPPRTAAKTSSHNSKTGSSAILFDPAAPGQRGRSVQTQTNARGPAKRVFSNRRSEGQKARRLSPQTQPWKPTLGHQMGSRPKSWLPTYKTSHNLAVPRSSTMGAPGQGFASAAVYEIPENFGGFAIRRLKPPSDQNQLTVQKKRFQIPTAAPQWMVPSTSYVQKVHPEARWTRIKLR
SIO_010081: LOC119425994
subclass of: SO_0000673
so part of: LOC119425994
location: join(4087070..4087092,4087165..4087223,4087298..4088325)
location: region:4087070-4088325:1
so has part: feature:4087070-4087092:1:exon
so has part: feature:4087165-4087223:1:exon
so has part: feature:4087298-4088325:1:exon

XP_037549482.1
type: Protein
SIO_000068: ncbiprotein

position:4087070:1
position: 4087070
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4088325:1
position: 4088325
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4087070-4087092:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4087165-4087223:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4087298-4088325:1:exon

LOC119425266
type: Gene
subclass of: SO_0000704
RO_0002162: 451745
gene: LOC119425266
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 4702486..4703281
location: region:4702486-4703281:1
so has part: feature:4702486-4703281:1:exon
subclass of: SO_0000011

119425266
type: Gene
SIO_000068: ncbigene

position:4702486:1
position: 4702486
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4703281:1
position: 4703281
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4702486-4703281:1:exon

LOC119425266
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 451745
nc RNA class: lncRNA
gene: LOC119425266
product: uncharacterized LOC119425266
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XR_005187557.1
SIO_010081: LOC119425266
subclass of: SO_0000673
so part of: LOC119425266
location: join(4702486..4702576,4702701..4702807,4702910..4702996,4703246..4703281)
location: region:4702486-4703281:1
so has part: feature:4702486-4702576:1:exon
so has part: feature:4702701-4702807:1:exon
so has part: feature:4702910-4702996:1:exon
so has part: feature:4703246-4703281:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4702486-4702576:1:exon

position:4702576:1
position: 4702576
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4702701-4702807:1:exon

position:4702701:1
position: 4702701
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4702807:1
position: 4702807
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4702910-4702996:1:exon

position:4702910:1
position: 4702910
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4702996:1
position: 4702996
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:4703246-4703281:1:exon

position:4703246:1
position: 4703246
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

zgc:153012
type: Gene
subclass of: SO_0000704
RO_0002162: 451745
gene: zgc:153012
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 4725763..4756802
location: region:4725763-4756802:1
so has part: feature:4725763-4756802:1:exon
subclass of: SO_0000010

119425292
type: Gene
SIO_000068: ncbigene

position:4725763:1
position: 4725763
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4756802:1
position: 4756802
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4725763-4756802:1:exon

zgc:153012
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 451745
gene: zgc:153012
product: uncharacterized protein LOC777626 homolog
inference: similar to RNA sequence (same species):INSD:GELZ01016587.1
exception: annotated by transcript or proteomic data
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: added 49 bases not found in genome assembly; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_037692814.1
SIO_010081: zgc:153012
subclass of: SO_0000673
so part of: zgc:153012
location: join(4725763..4726022,4742525..4743214,4749272..>4749405,<4756246..4756802)
location: region:4725763-4756802:1
so has part: feature:4725763-4726022:1:exon
so has part: feature:4742525-4743214:1:exon
so has part: feature:4749272-4749405:1:exon
so has part: feature:4756246-4756802:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4725763-4726022:1:exon

position:4726022:1
position: 4726022
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4742525-4743214:1:exon

position:4742525:1
position: 4742525
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4743214:1
position: 4743214
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4749272-4749405:1:exon

position:4749272:1
position: 4749272
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4749405:1
position: 4749405
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 4
SIO_000628: feature:4756246-4756802:1:exon

position:4756246:1
position: 4756246
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

zgc:153012
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 451745
gene: zgc:153012
inference: similar to RNA sequence (same species):INSD:GELZ01016587.1
exception: annotated by transcript or proteomic data
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: added 49 bases not found in genome assembly; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: TSC22 domain family protein 4
translation: MSGGKKRSGFQITSVTSDSSQPTSPAGRTSPSMVQTIQPDPFSIRHILGSSSQPTTPSPTRKNISHDASGQGVGCSSRFRVVRLTGGGAGQGGRSKSYQRGRWTCMEFMERPKEAGFRRVMDSMRHAHSLESLEMIGRDKERGGVHSQDTTHMLTKPVNGTDGILPRSRLTSPTNQDPISIRLLDRSEPISVQGLDSTPSPISPRPQNFPQPLQLEMDTTSVLRMSQSLPSSPLSESYHPTLTPTQTLSPFRLDQTIFSLQGDSSASGNSYAIDNKIEQAMDLVKSHLMLAVREEVELLREQIRDLQEKNQQLERENHILRALTHNYTTSTQHNSNNNTTFM
SIO_010081: zgc:153012
subclass of: SO_0000673
so part of: zgc:153012
location: join(4742555..4743214,4749272..>4749405,<4756246..4756431)
location: region:4742555-4756431:1
so has part: feature:4742555-4743214:1:exon
so has part: feature:4749272-4749405:1:exon
so has part: feature:4756246-4756431:1:exon

XP_037548742.1
type: Protein
SIO_000068: ncbiprotein

position:4742555:1
position: 4742555
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4756431:1
position: 4756431
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4742555-4743214:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4749272-4749405:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4756246-4756431:1:exon

zgc:158659
type: Gene
subclass of: SO_0000704
RO_0002162: 451745
gene: zgc:158659
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 4791739..4995893
location: region:4791739-4995893:1
so has part: feature:4791739-4995893:1:exon
subclass of: SO_0000010

119425611
type: Gene
SIO_000068: ncbigene

position:4791739:1
position: 4791739
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4995893:1
position: 4995893
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4791739-4995893:1:exon

zgc:158659
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 451745
gene: zgc:158659
product: uncharacterized protein LOC791141 homolog
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 32 Proteins, and 73% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_037693145.1
SIO_010081: zgc:158659
subclass of: SO_0000673
so part of: zgc:158659
location: join(4791739..4792027,4793504..4793627,4809735..4809838,4809917..4810079,4810157..4810366,4810463..4810530,4817817..4817945,4835702..4835755,4835861..4835970,4836056..4836197,4836334..4836419,4836525..4836630,4836724..4836876,4836957..4837088,4840183..4840307,4894798..4894879,4894975..4895139,4895225..4895328,4895450..4895549,4937859..4937930,4938017..4938123,4938226..4938347,4944624..4944702,4944776..4944946,4990389..4990506,4991542..4991693,4991772..4991920,4995752..4995893)
location: region:4791739-4995893:1
so has part: feature:4791739-4792027:1:exon
so has part: feature:4793504-4793627:1:exon
so has part: feature:4809735-4809838:1:exon
so has part: feature:4809917-4810079:1:exon
so has part: feature:4810157-4810366:1:exon
so has part: feature:4810463-4810530:1:exon
so has part: feature:4817817-4817945:1:exon
so has part: feature:4835702-4835755:1:exon
so has part: feature:4835861-4835970:1:exon
so has part: feature:4836056-4836197:1:exon
so has part: feature:4836334-4836419:1:exon
so has part: feature:4836525-4836630:1:exon
so has part: feature:4836724-4836876:1:exon
so has part: feature:4836957-4837088:1:exon
so has part: feature:4840183-4840307:1:exon
so has part: feature:4894798-4894879:1:exon
so has part: feature:4894975-4895139:1:exon
so has part: feature:4895225-4895328:1:exon
so has part: feature:4895450-4895549:1:exon
so has part: feature:4937859-4937930:1:exon
so has part: feature:4938017-4938123:1:exon
so has part: feature:4938226-4938347:1:exon
so has part: feature:4944624-4944702:1:exon
so has part: feature:4944776-4944946:1:exon
so has part: feature:4990389-4990506:1:exon
so has part: feature:4991542-4991693:1:exon
so has part: feature:4991772-4991920:1:exon
so has part: feature:4995752-4995893:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4791739-4792027:1:exon

position:4792027:1
position: 4792027
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4793504-4793627:1:exon

position:4793504:1
position: 4793504
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4793627:1
position: 4793627
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4809735-4809838:1:exon

position:4809735:1
position: 4809735
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4809838:1
position: 4809838
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:4809917-4810079:1:exon

position:4809917:1
position: 4809917
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4810079:1
position: 4810079
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:4810157-4810366:1:exon

position:4810157:1
position: 4810157
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4810366:1
position: 4810366
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:4810463-4810530:1:exon

position:4810463:1
position: 4810463
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4810530:1
position: 4810530
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:4817817-4817945:1:exon

position:4817817:1
position: 4817817
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4817945:1
position: 4817945
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:4835702-4835755:1:exon

position:4835702:1
position: 4835702
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4835755:1
position: 4835755
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:4835861-4835970:1:exon

position:4835861:1
position: 4835861
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4835970:1
position: 4835970
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:4836056-4836197:1:exon

position:4836056:1
position: 4836056
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4836197:1
position: 4836197
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:4836334-4836419:1:exon

position:4836334:1
position: 4836334
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4836419:1
position: 4836419
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:4836525-4836630:1:exon

position:4836525:1
position: 4836525
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4836630:1
position: 4836630
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:4836724-4836876:1:exon

position:4836724:1
position: 4836724
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4836876:1
position: 4836876
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:4836957-4837088:1:exon

position:4836957:1
position: 4836957
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4837088:1
position: 4837088
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:4840183-4840307:1:exon

position:4840183:1
position: 4840183
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4840307:1
position: 4840307
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:4894798-4894879:1:exon

position:4894798:1
position: 4894798
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4894879:1
position: 4894879
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:4894975-4895139:1:exon

position:4894975:1
position: 4894975
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4895139:1
position: 4895139
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:4895225-4895328:1:exon

position:4895225:1
position: 4895225
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4895328:1
position: 4895328
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:4895450-4895549:1:exon

position:4895450:1
position: 4895450
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4895549:1
position: 4895549
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:4937859-4937930:1:exon

position:4937859:1
position: 4937859
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4937930:1
position: 4937930
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:4938017-4938123:1:exon

position:4938017:1
position: 4938017
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4938123:1
position: 4938123
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:4938226-4938347:1:exon

position:4938226:1
position: 4938226
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4938347:1
position: 4938347
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:4944624-4944702:1:exon

position:4944624:1
position: 4944624
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4944702:1
position: 4944702
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:4944776-4944946:1:exon

position:4944776:1
position: 4944776
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4944946:1
position: 4944946
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:4990389-4990506:1:exon

position:4990389:1
position: 4990389
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4990506:1
position: 4990506
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 26
SIO_000628: feature:4991542-4991693:1:exon

position:4991542:1
position: 4991542
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4991693:1
position: 4991693
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 27
SIO_000628: feature:4991772-4991920:1:exon

position:4991772:1
position: 4991772
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4991920:1
position: 4991920
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 28
SIO_000628: feature:4995752-4995893:1:exon

position:4995752:1
position: 4995752
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

zgc:158659
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 451745
gene: zgc:158659
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: phosphatidylinositol 4,5-bisphosphate 3-kinase catalytic subunit alpha isoform
translation: MAPRPSSGELWGLHLMPPRILVDCCLPNGMMVSLECLRETPLISIKQQLFMEARKYPLYHLLQEESSYIFVGVTQEAEREEFYDETRRLCDLRLFHPILKVIEPVGNREEKILNREIGFAIGMPVFEFEMLKDPEVQDFRRSILSVCREAVEEREGGGAHSQALYVYPPNVESSPHLPQHIYSKLDKGRLIVTIWVIVSPSNSKQKYTLKVSHDTLPEQLIAESIRKKSRSMHLSPQQLRLCVQEYQGQYILKVCGCDEYLLEKFPLSQYKYIRSCIIVGRLPHLMLVSKDSLYSQLPASSFAPPSYSRRTPQPSPCLGGGDGSPPRSLWAFNTLLRVRLLCATYVNVNIRDIDKIYVRTGIYHGGEPLCDNVNTQRVPCSNPRWNEWLTYDIYLADIPRSARLCLSICSVKGRKGAKEEHCPLAWGNVNLFDYKDILVSGKVALSLWPVPHGLEDLLNPIGVAGSNPNKETPCVELEFSWFNQMVVFPDEQQIEEHANWTISRELGYNYCHGLTSRLACDNSVSAADSEQLCSLCSKDPLYELSEQEKDFLWRHRHYCINMPESLPKLLLSVKWNSRDEVSQMYCLLKEWPLMEPELALELLDCNFPDPMVREFALRCLVQGLTDDKLSQYLLQLVQVLKYEMYLDNPLARFLIKKALTNQRIGHFFFWHLKSEMHNNTISRRFGLLLEAFCRACGMYLKHLNRQVEAMDKLVNLTDTLKQEKKDETQKTQMKFLVEHMSRPDYMDSLQGFVSPLNPVHQLGNLRLEECRIMSSAKRPLWLNWENPDIMSELLFPNNEIIFKNGDDLRQDMLTLQIIRIMENIWQNQGLDLRMLPYGCLSIGDCVGLIEVVKNSFTIMQIQCKGGLKGALQFNSNTLHHWIKDKNRGEAYDRAIDLFTRSCAGYCVATFILGIGDRHNSNIMVKENGQLFHIDFGHFLDHKKKKFGYKRERVPFVLTQDFLIVISKGVQESTKTKEFERFQEMCYKAYLAIRQHASLFINLFSLLLGCGMPELQSFDDIAYLRKTLALEKSQQEALEYFTKQMNDAHHGGWSTKMDWIFHTIRHMPNEH
SIO_010081: zgc:158659
subclass of: SO_0000673
so part of: zgc:158659
location: join(4793543..4793627,4809735..4809838,4809917..4810079,4810157..4810366,4810463..4810530,4817817..4817945,4835702..4835755,4835861..4835970,4836056..4836197,4836334..4836419,4836525..4836630,4836724..4836876,4836957..4837088,4840183..4840307,4894798..4894879,4894975..4895139,4895225..4895328,4895450..4895549,4937859..4937930,4938017..4938123,4938226..4938347,4944624..4944702,4944776..4944946,4990389..4990506,4991542..4991693,4991772..4991920,4995752..4995876)
location: region:4793543-4995876:1
so has part: feature:4793543-4793627:1:exon
so has part: feature:4809735-4809838:1:exon
so has part: feature:4809917-4810079:1:exon
so has part: feature:4810157-4810366:1:exon
so has part: feature:4810463-4810530:1:exon
so has part: feature:4817817-4817945:1:exon
so has part: feature:4835702-4835755:1:exon
so has part: feature:4835861-4835970:1:exon
so has part: feature:4836056-4836197:1:exon
so has part: feature:4836334-4836419:1:exon
so has part: feature:4836525-4836630:1:exon
so has part: feature:4836724-4836876:1:exon
so has part: feature:4836957-4837088:1:exon
so has part: feature:4840183-4840307:1:exon
so has part: feature:4894798-4894879:1:exon
so has part: feature:4894975-4895139:1:exon
so has part: feature:4895225-4895328:1:exon
so has part: feature:4895450-4895549:1:exon
so has part: feature:4937859-4937930:1:exon
so has part: feature:4938017-4938123:1:exon
so has part: feature:4938226-4938347:1:exon
so has part: feature:4944624-4944702:1:exon
so has part: feature:4944776-4944946:1:exon
so has part: feature:4990389-4990506:1:exon
so has part: feature:4991542-4991693:1:exon
so has part: feature:4991772-4991920:1:exon
so has part: feature:4995752-4995876:1:exon

XP_037549073.1
type: Protein
SIO_000068: ncbiprotein

position:4793543:1
position: 4793543
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4995876:1
position: 4995876
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4793543-4793627:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4809735-4809838:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4809917-4810079:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4810157-4810366:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4810463-4810530:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4817817-4817945:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4835702-4835755:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4835861-4835970:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4836056-4836197:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4836334-4836419:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:4836525-4836630:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:4836724-4836876:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:4836957-4837088:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:4840183-4840307:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:4894798-4894879:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:4894975-4895139:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:4895225-4895328:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:4895450-4895549:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:4937859-4937930:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:4938017-4938123:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:4938226-4938347:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:4944624-4944702:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:4944776-4944946:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:4990389-4990506:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:4991542-4991693:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:4991772-4991920:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:4995752-4995876:1:exon

LOC119426030
type: Gene
subclass of: SO_0000704
RO_0002162: 451745
gene: LOC119426030
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 5171311..>5194013
location: region:5171311-5194013:1
so has part: feature:5171311-5194013:1:exon
subclass of: SO_0000010

119426030
type: Gene
SIO_000068: ncbigene

position:5171311:1
position: 5171311
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5194013:1
position: 5194013
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5171311-5194013:1:exon

LOC119426030
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 451745
gene: LOC119426030
product: collagen alpha-1(XXVIII) chain
inference: similar to RNA sequence (same species):INSD:GELZ01019712.1
exception: annotated by transcript or proteomic data
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: added 79 bases not found in genome assembly; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 80% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_037693590.1
SIO_010081: LOC119426030
subclass of: SO_0000673
so part of: LOC119426030
location: join(5171311..5171853,5188689..5188709,5188897..5188956,5193048..5193098,5193209..5193253,5193490..5193516,5193826..5193870,5193969..>5194013)
location: region:5171311-5194013:1
so has part: feature:5171311-5171853:1:exon
so has part: feature:5188689-5188709:1:exon
so has part: feature:5188897-5188956:1:exon
so has part: feature:5193048-5193098:1:exon
so has part: feature:5193209-5193253:1:exon
so has part: feature:5193490-5193516:1:exon
so has part: feature:5193826-5193870:1:exon
so has part: feature:5193969-5194013:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5171311-5171853:1:exon

position:5171853:1
position: 5171853
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:5188689-5188709:1:exon

position:5188689:1
position: 5188689
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5188709:1
position: 5188709
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:5188897-5188956:1:exon

position:5188897:1
position: 5188897
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5188956:1
position: 5188956
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:5193048-5193098:1:exon

position:5193048:1
position: 5193048
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5193098:1
position: 5193098
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:5193209-5193253:1:exon

position:5193209:1
position: 5193209
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5193253:1
position: 5193253
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:5193490-5193516:1:exon

position:5193490:1
position: 5193490
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5193516:1
position: 5193516
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:5193826-5193870:1:exon

position:5193826:1
position: 5193826
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5193870:1
position: 5193870
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:5193969-5194013:1:exon

position:5193969:1
position: 5193969
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC119426030
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 451745
gene: LOC119426030
inference: similar to RNA sequence (same species):INSD:GELZ01019712.1
exception: annotated by transcript or proteomic data
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: added 79 bases not found in genome assembly; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: collagen alpha-1(XXVIII) chain
translation: MFMVDSSEKTRFVLFDQQKDFVLRFSTKVLQLHLDGLLLRQRLSALQYSSKVLVEHSFKDWQNLNSFQTQVASMDFIGHGTFSAYAITNATKLFRQETSPSSLRVALLMTDGSDHPHSPSAVAAAAEAKQHHIRVFTIGLSAGPQRATLGTKLRSIASAPPQQHVLSLADSQLDDRLLNQLHTAIKGGCPQPKNCICEKGEQGLPGSPGKPGEPGSAVPGPKGSHGETGMNGLPGAEGLRGQPGSKGIKGECGESGASGAKGENGVDGPPGPTGLTGNQGTRGAPGDSGPEGPPGPKGELGPGGE
SIO_010081: LOC119426030
subclass of: SO_0000673
so part of: LOC119426030
location: join(5171311..5171853,5188689..5188709,5188897..5188956,5193048..5193098,5193209..5193253,5193490..5193516,5193826..5193870,5193969..>5194013)
location: region:5171311-5194013:1
so has part: feature:5171311-5171853:1:exon
so has part: feature:5188689-5188709:1:exon
so has part: feature:5188897-5188956:1:exon
so has part: feature:5193048-5193098:1:exon
so has part: feature:5193209-5193253:1:exon
so has part: feature:5193490-5193516:1:exon
so has part: feature:5193826-5193870:1:exon
so has part: feature:5193969-5194013:1:exon

XP_037549518.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:5171311-5171853:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5188689-5188709:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5188897-5188956:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5193048-5193098:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5193209-5193253:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:5193490-5193516:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:5193826-5193870:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:5193969-5194013:1:exon

LOC119426031
type: Gene
subclass of: SO_0000704
RO_0002162: 451745
gene: LOC119426031
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 5224231..5392913
location: region:5224231-5392913:1
so has part: feature:5224231-5392913:1:exon
subclass of: SO_0000010

119426031
type: Gene
SIO_000068: ncbigene

position:5224231:1
position: 5224231
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5392913:1
position: 5392913
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5224231-5392913:1:exon

LOC119426031
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 451745
gene: LOC119426031
product: collagen alpha-1(XXVIII) chain
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 97% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_037693591.1
SIO_010081: LOC119426031
subclass of: SO_0000673
so part of: LOC119426031
location: join(5224231..5224269,5254203..5254271,5284843..5284914,5286196..5286264,5286454..5286522,5327786..5327854,5327958..5328026,5374007..5374075,5374158..5374226,5376903..5376971,5377051..5377131,5392166..5392201,5392279..5392315,5392909..5392913)
location: region:5224231-5392913:1
so has part: feature:5224231-5224269:1:exon
so has part: feature:5254203-5254271:1:exon
so has part: feature:5284843-5284914:1:exon
so has part: feature:5286196-5286264:1:exon
so has part: feature:5286454-5286522:1:exon
so has part: feature:5327786-5327854:1:exon
so has part: feature:5327958-5328026:1:exon
so has part: feature:5374007-5374075:1:exon
so has part: feature:5374158-5374226:1:exon
so has part: feature:5376903-5376971:1:exon
so has part: feature:5377051-5377131:1:exon
so has part: feature:5392166-5392201:1:exon
so has part: feature:5392279-5392315:1:exon
so has part: feature:5392909-5392913:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5224231-5224269:1:exon

position:5224269:1
position: 5224269
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:5254203-5254271:1:exon

position:5254203:1
position: 5254203
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5254271:1
position: 5254271
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:5284843-5284914:1:exon

position:5284843:1
position: 5284843
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5284914:1
position: 5284914
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:5286196-5286264:1:exon

position:5286196:1
position: 5286196
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5286264:1
position: 5286264
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:5286454-5286522:1:exon

position:5286454:1
position: 5286454
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5286522:1
position: 5286522
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:5327786-5327854:1:exon

position:5327786:1
position: 5327786
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5327854:1
position: 5327854
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:5327958-5328026:1:exon

position:5327958:1
position: 5327958
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5328026:1
position: 5328026
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:5374007-5374075:1:exon

position:5374007:1
position: 5374007
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5374075:1
position: 5374075
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:5374158-5374226:1:exon

position:5374158:1
position: 5374158
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5374226:1
position: 5374226
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:5376903-5376971:1:exon

position:5376903:1
position: 5376903
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5376971:1
position: 5376971
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:5377051-5377131:1:exon

position:5377051:1
position: 5377051
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5377131:1
position: 5377131
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:5392166-5392201:1:exon

position:5392166:1
position: 5392166
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5392201:1
position: 5392201
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:5392279-5392315:1:exon

position:5392279:1
position: 5392279
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5392315:1
position: 5392315
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:5392909-5392913:1:exon

position:5392909:1
position: 5392909
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC119426031
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 451745
gene: LOC119426031
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: collagen alpha-1(XXVIII) chain
translation: MGLHGPAGHGKAGQKGSPGPRGPPGFVGEPGDRIIGPKGSKGNVGPVGPPGAKEDSLPGPWGLPGLPGIKGELGLEGKGLPGVKGDKGLPGVPGPSGHTGIGLGGPKGSTGQPGPPGTSGLPGEGILGPKGEPGLQGFTGPRGVRRDDFPGEKGDEGHPGDRGRHGDKGDHGAPGHPGPLGRVGEKGEPGLTREEVIEIIREICE
SIO_010081: LOC119426031
subclass of: SO_0000673
so part of: LOC119426031
location: join(5286220..5286264,5286454..5286522,5327786..5327854,5327958..5328026,5374007..5374075,5374158..5374226,5376903..5376971,5377051..5377131,5392166..5392201,5392279..5392315,5392909..5392913)
location: region:5286220-5392913:1
so has part: feature:5286220-5286264:1:exon
so has part: feature:5286454-5286522:1:exon
so has part: feature:5327786-5327854:1:exon
so has part: feature:5327958-5328026:1:exon
so has part: feature:5374007-5374075:1:exon
so has part: feature:5374158-5374226:1:exon
so has part: feature:5376903-5376971:1:exon
so has part: feature:5377051-5377131:1:exon
so has part: feature:5392166-5392201:1:exon
so has part: feature:5392279-5392315:1:exon
so has part: feature:5392909-5392913:1:exon

XP_037549519.1
type: Protein
SIO_000068: ncbiprotein

position:5286220:1
position: 5286220
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5286220-5286264:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5286454-5286522:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5327786-5327854:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5327958-5328026:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5374007-5374075:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:5374158-5374226:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:5376903-5376971:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:5377051-5377131:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:5392166-5392201:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:5392279-5392315:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:5392909-5392913:1:exon

si:dkey-202e17.1
type: Gene
subclass of: SO_0000704
RO_0002162: 451745
gene: si:dkey-202e17.1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(5492833..5495491)
location: region:5492833-5495491:-1
so has part: feature:5492833-5495491:-1:exon
subclass of: SO_0000010

119426033
type: Gene
SIO_000068: ncbigene

position:5492833:-1
position: 5492833
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5495491:-1
position: 5495491
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5492833-5495491:-1:exon

si:dkey-202e17.1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 451745
gene: si:dkey-202e17.1
product: uncharacterized protein LOC555344 homolog
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 30 Proteins
transcript id: XM_037693594.1
SIO_010081: si:dkey-202e17.1
subclass of: SO_0000673
so part of: si:dkey-202e17.1
location: complement(join(5492833..5492997,5494802..5495491))
location: region:5492833-5495491:-1
so has part: feature:5494802-5495491:-1:exon
so has part: feature:5492833-5492997:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5494802-5495491:-1:exon

position:5494802:-1
position: 5494802
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:5492833-5492997:-1:exon

position:5492997:-1
position: 5492997
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

si:dkey-202e17.1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 451745
gene: si:dkey-202e17.1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase 1
translation: MTGPKNLETRTKHIRGTWAKRCGKVIYMSSVKTDFSTVQLNVSEGRDNLYWKTIKALQYIHQHHLDEANWFLKADDDTYVVMENLHYVLLKYDPEKPLYLGRRFTPFISQGYMSGGAGYVLSKEALRRFVKGFSTGECTHFSSIEDMALGKCMETMKVQPADSRDMRGRQTFHPYPPDYYVVRQPARSRPWYLLYDYYAPTEGPGCCSDFVVSFHYIYAVQMYVLEYLTYHLRPYGYKYRFNPKEGLQTNNKTKLK
SIO_010081: si:dkey-202e17.1
subclass of: SO_0000673
so part of: si:dkey-202e17.1
location: complement(join(5492833..5492997,5494802..5495407))
location: region:5492833-5495407:-1
so has part: feature:5494802-5495407:-1:exon
so has part: feature:5492833-5492997:-1:exon

XP_037549522.1
type: Protein
SIO_000068: ncbiprotein

position:5495407:-1
position: 5495407
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5494802-5495407:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5492833-5492997:-1:exon

LOC119426034
type: Gene
subclass of: SO_0000704
RO_0002162: 451745
gene: LOC119426034
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 5652997..5653776
location: region:5652997-5653776:1
so has part: feature:5652997-5653776:1:exon
subclass of: SO_0000010

119426034
type: Gene
SIO_000068: ncbigene

position:5652997:1
position: 5652997
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5653776:1
position: 5653776
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5652997-5653776:1:exon

LOC119426034
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 451745
gene: LOC119426034
product: proline-rich protein 2-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein
transcript id: XM_037693595.1
SIO_010081: LOC119426034
subclass of: SO_0000673
so part of: LOC119426034
location: join(5652997..5653505,5653623..5653776)
location: region:5652997-5653776:1
so has part: feature:5652997-5653505:1:exon
so has part: feature:5653623-5653776:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5652997-5653505:1:exon

position:5653505:1
position: 5653505
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:5653623-5653776:1:exon

position:5653623:1
position: 5653623
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC119426034
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 451745
gene: LOC119426034
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: proline-rich protein 2-like
translation: MTTESTPQPPQRDRPVHHSNTHNESESTPCKGGHMPNTPRHPRASSAEPPKQEPPIHAPQPRPPTKHQTAATARLNPPVPSHGPSPLPPTVSPPPPPPWQRTQSPPAHQGTPGQHAPAQDPDNIPAKTQDPLAKPGPRPRSDTPPEPRTRTHPKPTQEQPGHQASNLRPRTDTPPPPQSTTMPHGTKSKEFTHLHYVLELIKEAQRDWSDMEVQAVSRLM
SIO_010081: LOC119426034
subclass of: SO_0000673
so part of: LOC119426034
location: join(5652997..5653505,5653623..5653776)
location: region:5652997-5653776:1
so has part: feature:5652997-5653505:1:exon
so has part: feature:5653623-5653776:1:exon

XP_037549523.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:5652997-5653505:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5653623-5653776:1:exon

tac1
type: Gene
subclass of: SO_0000704
RO_0002162: 451745
gene: tac1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 5835256..5838932
location: region:5835256-5838932:1
so has part: feature:5835256-5838932:1:exon
subclass of: SO_0000010

119425379
type: Gene
SIO_000068: ncbigene

position:5835256:1
position: 5835256
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5838932:1
position: 5838932
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5835256-5838932:1:exon

tac1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 451745
gene: tac1
product: tachykinin precursor 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 14 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_037692900.1
SIO_010081: tac1
subclass of: SO_0000673
so part of: tac1
location: join(5835256..5835582,5836940..5837042,5837127..5837153,5838690..5838746,5838835..5838932)
location: region:5835256-5838932:1
so has part: feature:5835256-5835582:1:exon
so has part: feature:5836940-5837042:1:exon
so has part: feature:5837127-5837153:1:exon
so has part: feature:5838690-5838746:1:exon
so has part: feature:5838835-5838932:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5835256-5835582:1:exon

position:5835582:1
position: 5835582
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:5836940-5837042:1:exon

position:5836940:1
position: 5836940
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5837042:1
position: 5837042
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:5837127-5837153:1:exon

position:5837127:1
position: 5837127
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5837153:1
position: 5837153
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:5838690-5838746:1:exon

position:5838690:1
position: 5838690
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5838746:1
position: 5838746
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:5838835-5838932:1:exon

position:5838835:1
position: 5838835
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

tac1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 451745
gene: tac1
product: tachykinin precursor 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 14 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_037692901.1
SIO_010081: tac1
subclass of: SO_0000673
so part of: tac1
location: join(5835256..5835345,5835441..5835582,5836940..5837042,5837127..5837153,5838690..5838746,5838835..5838932)
location: region:5835256-5838932:1
so has part: feature:5835256-5835345:1:exon
so has part: feature:5835441-5835582:1:exon
so has part: feature:5836940-5837042:1:exon
so has part: feature:5837127-5837153:1:exon
so has part: feature:5838690-5838746:1:exon
so has part: feature:5838835-5838932:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5835256-5835345:1:exon

position:5835345:1
position: 5835345
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:5835441-5835582:1:exon

position:5835441:1
position: 5835441
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:5836940-5837042:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5837127-5837153:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5838690-5838746:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:5838835-5838932:1:exon

tac1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 451745
gene: tac1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protachykinin-1
translation: MKNFVCLSVFMCLCVLTQVFCEDTEPKEGLEFWTSRNQIQDPAGDWLSRDPFREILLRMTRKPRPHQFIGLMGKRSEANAAQITCKRHKVNSFVDVMGKRSHEDPESYEWRMIPTYDDRR
SIO_010081: tac1
subclass of: SO_0000673
so part of: tac1
location: join(5835454..5835582,5836940..5837042,5837127..5837153,5838690..5838746,5838835..5838881)
location: region:5835454-5838881:1
so has part: feature:5835454-5835582:1:exon
so has part: feature:5836940-5837042:1:exon
so has part: feature:5837127-5837153:1:exon
so has part: feature:5838690-5838746:1:exon
so has part: feature:5838835-5838881:1:exon

XP_037548828.1
type: Protein
SIO_000068: ncbiprotein

position:5835454:1
position: 5835454
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5838881:1
position: 5838881
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5835454-5835582:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5836940-5837042:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5837127-5837153:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5838690-5838746:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5838835-5838881:1:exon

tac1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 451745
gene: tac1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protachykinin-1
translation: MKNFVCLSVFMCLCVLTQVFCEDTEPKEGLEFWTSRNQIQDPAGDWLSRDPFREILLRMTRKPRPHQFIGLMGKRSEANAAQITCKRHKVNSFVDVMGKRSHEDPESYEWRMIPTYDDRR
SIO_010081: tac1
subclass of: SO_0000673
so part of: tac1
location: join(5835454..5835582,5836940..5837042,5837127..5837153,5838690..5838746,5838835..5838881)
location: region:5835454-5838881:1
so has part: feature:5835454-5835582:1:exon
so has part: feature:5836940-5837042:1:exon
so has part: feature:5837127-5837153:1:exon
so has part: feature:5838690-5838746:1:exon
so has part: feature:5838835-5838881:1:exon

XP_037548829.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:5835454-5835582:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5836940-5837042:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5837127-5837153:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5838690-5838746:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5838835-5838881:1:exon

asns
type: Gene
subclass of: SO_0000704
RO_0002162: 451745
gene: asns
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 5985452..>6035099
location: region:5985452-6035099:1
so has part: feature:5985452-6035099:1:exon
subclass of: SO_0000010

119426006
type: Gene
SIO_000068: ncbigene

position:5985452:1
position: 5985452
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6035099:1
position: 6035099
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5985452-6035099:1:exon

asns
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 451745
gene: asns
product: asparagine synthetase
inference: similar to RNA sequence (same species):INSD:GELZ01029355.1
exception: annotated by transcript or proteomic data
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: added 542 bases not found in genome assembly; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 15 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_037693566.1
SIO_010081: asns
subclass of: SO_0000673
so part of: asns
location: join(5985452..5985501,5993956..5994211,5995572..5995809,5995883..5996068,5996136..5996237,5996752..5996879,5996983..5997109,6009086..6009192,6023917..6024017,6034780..6034861,6034942..>6035099)
location: region:5985452-6035099:1
so has part: feature:5985452-5985501:1:exon
so has part: feature:5993956-5994211:1:exon
so has part: feature:5995572-5995809:1:exon
so has part: feature:5995883-5996068:1:exon
so has part: feature:5996136-5996237:1:exon
so has part: feature:5996752-5996879:1:exon
so has part: feature:5996983-5997109:1:exon
so has part: feature:6009086-6009192:1:exon
so has part: feature:6023917-6024017:1:exon
so has part: feature:6034780-6034861:1:exon
so has part: feature:6034942-6035099:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5985452-5985501:1:exon

position:5985501:1
position: 5985501
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:5993956-5994211:1:exon

position:5993956:1
position: 5993956
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5994211:1
position: 5994211
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:5995572-5995809:1:exon

position:5995572:1
position: 5995572
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5995809:1
position: 5995809
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:5995883-5996068:1:exon

position:5995883:1
position: 5995883
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5996068:1
position: 5996068
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:5996136-5996237:1:exon

position:5996136:1
position: 5996136
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5996237:1
position: 5996237
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:5996752-5996879:1:exon

position:5996752:1
position: 5996752
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5996879:1
position: 5996879
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:5996983-5997109:1:exon

position:5996983:1
position: 5996983
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5997109:1
position: 5997109
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:6009086-6009192:1:exon

position:6009086:1
position: 6009086
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6009192:1
position: 6009192
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:6023917-6024017:1:exon

position:6023917:1
position: 6023917
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6024017:1
position: 6024017
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:6034780-6034861:1:exon

position:6034780:1
position: 6034780
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6034861:1
position: 6034861
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:6034942-6035099:1:exon

position:6034942:1
position: 6034942
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

asns
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 451745
gene: asns
inference: similar to RNA sequence (same species):INSD:GELZ01029355.1
exception: annotated by transcript or proteomic data
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: added 205 bases not found in genome assembly; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: asparagine synthetase [glutamine-hydrolyzing]
translation: MCGIWALFGSDECLSVQCTSAMKIAHRGPDAFRFENVNGFTNCCFGFHRLAIVDQLYGMQPLRVQKFPYLWLCYNGEIYNHYTLKEQFGFDYQTKMDGEVLLHLYDRFGIKKMASLLDGVFAFVLLDTANRKVHLGRDTYGVRPLFRFLTDDGFLAVCSEAKGLIDITHSMNTSASIVPFLPGHIEVFDLKPTGKVQSVQFEQFHCCTQEPAHAIYDTVEKLPSGFDVETVKGNIRTLFENAVRKRLMAHRRIGCLLSGGLDSSLVAAMLVKLAKEEKLPYPIQTFSIGSEDSPDILAARKMAAHIGSEHHEVNFSPEEGFQAVKEVIFHLETYDITTIRASVGMYLVSKYIRTKTDSVVIFSGEGADELTQGYIYFHKAPSPKVAAEDSVRLLKELYMFDVLRADRTTAAHGLELRVPFLDHRFTAYYLSLPEEMRVPKDGVEKHLLRESFKGLNLIPDEILWRRKEAFSDGVMSVKKSWYTCLQEYLQSMVNDDQMQKAPKTFPHNSPSTKEAYHFREEFEKHYPGRAEWLTHYWMPRWVSTSDPSARTLSIYEPKQD
SIO_010081: asns
subclass of: SO_0000673
so part of: asns
location: join(5993963..5994211,5995572..5995809,5995883..5996068,5996136..5996237,5996752..5996879,5996983..5997109,6009086..6009192,6023917..6024017,6034780..6034861,6034942..>6035099)
location: region:5993963-6035099:1
so has part: feature:5993963-5994211:1:exon
so has part: feature:5995572-5995809:1:exon
so has part: feature:5995883-5996068:1:exon
so has part: feature:5996136-5996237:1:exon
so has part: feature:5996752-5996879:1:exon
so has part: feature:5996983-5997109:1:exon
so has part: feature:6009086-6009192:1:exon
so has part: feature:6023917-6024017:1:exon
so has part: feature:6034780-6034861:1:exon
so has part: feature:6034942-6035099:1:exon

XP_037549494.1
type: Protein
SIO_000068: ncbiprotein

position:5993963:1
position: 5993963
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5993963-5994211:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5995572-5995809:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5995883-5996068:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5996136-5996237:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5996752-5996879:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:5996983-5997109:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:6009086-6009192:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:6023917-6024017:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:6034780-6034861:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:6034942-6035099:1:exon

LOC119426035
type: Gene
subclass of: SO_0000704
RO_0002162: 451745
gene: LOC119426035
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(6041700..6130732)
location: region:6041700-6130732:-1
so has part: feature:6041700-6130732:-1:exon
subclass of: SO_0000010

119426035
type: Gene
SIO_000068: ncbigene

position:6041700:-1
position: 6041700
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6130732:-1
position: 6130732
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6041700-6130732:-1:exon

LOC119426035
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 451745
gene: LOC119426035
product: anillin
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 94% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_037693596.1
SIO_010081: LOC119426035
subclass of: SO_0000673
so part of: LOC119426035
location: complement(join(6041700..6041704,6041894..6041984,6050184..6050285,6050669..6050871,6050966..6051239,6130652..6130732))
location: region:6041700-6130732:-1
so has part: feature:6130652-6130732:-1:exon
so has part: feature:6050966-6051239:-1:exon
so has part: feature:6050669-6050871:-1:exon
so has part: feature:6050184-6050285:-1:exon
so has part: feature:6041894-6041984:-1:exon
so has part: feature:6041700-6041704:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6130652-6130732:-1:exon

position:6130652:-1
position: 6130652
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:6050966-6051239:-1:exon

position:6050966:-1
position: 6050966
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6051239:-1
position: 6051239
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:6050669-6050871:-1:exon

position:6050669:-1
position: 6050669
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6050871:-1
position: 6050871
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:6050184-6050285:-1:exon

position:6050184:-1
position: 6050184
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6050285:-1
position: 6050285
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:6041894-6041984:-1:exon

position:6041894:-1
position: 6041894
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6041984:-1
position: 6041984
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:6041700-6041704:-1:exon

position:6041704:-1
position: 6041704
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC119426035
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 451745
gene: LOC119426035
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: anillin
translation: MGFVPKPSARTKNSVTPDCKAVSSSQQESLHAPVKSSRVALPGRQKAEAPALESVHGAHKAAFPSASQESAVPPSPLKSPALSKDLHHIPSPQKPELQDKPTVSSSVAHQDKVPAAAPGAKSFLERFGERCQERKDHMTPNERLTSAKKTCVTPSVTPNTRLMQERLRAAHTANTTTAELTQRSRLERECELAQIRSGFQKGKSVWNVKDESAGTTMNNKVQKPVQSEVSQSEPAASTKNINTPPRCNSPI
SIO_010081: LOC119426035
subclass of: SO_0000673
so part of: LOC119426035
location: complement(join(6041700..6041704,6041894..6041984,6050184..6050285,6050669..6050871,6050966..6051239,6130652..6130732))
location: region:6041700-6130732:-1
so has part: feature:6130652-6130732:-1:exon
so has part: feature:6050966-6051239:-1:exon
so has part: feature:6050669-6050871:-1:exon
so has part: feature:6050184-6050285:-1:exon
so has part: feature:6041894-6041984:-1:exon
so has part: feature:6041700-6041704:-1:exon

XP_037549524.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:6130652-6130732:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6050966-6051239:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6050669-6050871:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6050184-6050285:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6041894-6041984:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:6041700-6041704:-1:exon

LOC119425925
type: Gene
subclass of: SO_0000704
RO_0002162: 451745
gene: LOC119425925
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(6072269..6075302)
location: region:6072269-6075302:-1
so has part: feature:6072269-6075302:-1:exon
subclass of: SO_0000011

119425925
type: Gene
SIO_000068: ncbigene

position:6072269:-1
position: 6072269
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6075302:-1
position: 6075302
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6072269-6075302:-1:exon

LOC119425925
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 451745
nc RNA class: lncRNA
gene: LOC119425925
product: uncharacterized LOC119425925
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XR_005187589.1
SIO_010081: LOC119425925
subclass of: SO_0000673
so part of: LOC119425925
location: complement(join(6072269..6072291,6072367..6072539,6075283..6075302))
location: region:6072269-6075302:-1
so has part: feature:6075283-6075302:-1:exon
so has part: feature:6072367-6072539:-1:exon
so has part: feature:6072269-6072291:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6075283-6075302:-1:exon

position:6075283:-1
position: 6075283
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:6072367-6072539:-1:exon

position:6072367:-1
position: 6072367
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6072539:-1
position: 6072539
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:6072269-6072291:-1:exon

position:6072291:-1
position: 6072291
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC119425926
type: Gene
subclass of: SO_0000704
RO_0002162: 451745
gene: LOC119425926
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(6075322..6089433)
location: region:6075322-6089433:-1
so has part: feature:6075322-6089433:-1:exon
subclass of: SO_0000011

119425926
type: Gene
SIO_000068: ncbigene

position:6075322:-1
position: 6075322
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6089433:-1
position: 6089433
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6075322-6089433:-1:exon

LOC119425926
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 451745
nc RNA class: lncRNA
gene: LOC119425926
product: uncharacterized LOC119425926
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XR_005187590.1
SIO_010081: LOC119425926
subclass of: SO_0000673
so part of: LOC119425926
location: complement(join(6075322..6075390,6082047..6082133,6089398..6089433))
location: region:6075322-6089433:-1
so has part: feature:6089398-6089433:-1:exon
so has part: feature:6082047-6082133:-1:exon
so has part: feature:6075322-6075390:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6089398-6089433:-1:exon

position:6089398:-1
position: 6089398
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:6082047-6082133:-1:exon

position:6082047:-1
position: 6082047
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6082133:-1
position: 6082133
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:6075322-6075390:-1:exon

position:6075390:-1
position: 6075390
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC119425924
type: Gene
subclass of: SO_0000704
RO_0002162: 451745
gene: LOC119425924
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(6089978..6094562)
location: region:6089978-6094562:-1
so has part: feature:6089978-6094562:-1:exon
subclass of: SO_0000011

119425924
type: Gene
SIO_000068: ncbigene

position:6089978:-1
position: 6089978
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6094562:-1
position: 6094562
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6089978-6094562:-1:exon

LOC119425924
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 451745
nc RNA class: lncRNA
gene: LOC119425924
product: uncharacterized LOC119425924
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XR_005187588.1
SIO_010081: LOC119425924
subclass of: SO_0000673
so part of: LOC119425924
location: complement(join(6089978..6090022,6094233..6094281,6094464..6094562))
location: region:6089978-6094562:-1
so has part: feature:6094464-6094562:-1:exon
so has part: feature:6094233-6094281:-1:exon
so has part: feature:6089978-6090022:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6094464-6094562:-1:exon

position:6094464:-1
position: 6094464
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:6094233-6094281:-1:exon

position:6094233:-1
position: 6094233
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6094281:-1
position: 6094281
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:6089978-6090022:-1:exon

position:6090022:-1
position: 6090022
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

eepd1
type: Gene
subclass of: SO_0000704
RO_0002162: 451745
gene: eepd1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(6168886..>6268850)
location: region:6168886-6268850:-1
so has part: feature:6168886-6268850:-1:exon
subclass of: SO_0000010

119425235
type: Gene
SIO_000068: ncbigene

position:6168886:-1
position: 6168886
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6268850:-1
position: 6268850
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6168886-6268850:-1:exon

eepd1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 451745
gene: eepd1
product: endonuclease/exonuclease/phosphatase family domain containing 1
inference: similar to RNA sequence (same species):INSD:GELZ01014679.1
exception: annotated by transcript or proteomic data
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: added 189 bases not found in genome assembly; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 93% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_037692759.1
SIO_010081: eepd1
subclass of: SO_0000673
so part of: eepd1
location: complement(join(6168886..6169326,6234518..6234712,6237335..6237473,6239677..6239811,6240750..6240860,6268799..>6268850))
location: region:6168886-6268850:-1
so has part: feature:6268799-6268850:-1:exon
so has part: feature:6240750-6240860:-1:exon
so has part: feature:6239677-6239811:-1:exon
so has part: feature:6237335-6237473:-1:exon
so has part: feature:6234518-6234712:-1:exon
so has part: feature:6168886-6169326:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6268799-6268850:-1:exon

position:6268799:-1
position: 6268799
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:6240750-6240860:-1:exon

position:6240750:-1
position: 6240750
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6240860:-1
position: 6240860
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:6239677-6239811:-1:exon

position:6239677:-1
position: 6239677
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6239811:-1
position: 6239811
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:6237335-6237473:-1:exon

position:6237335:-1
position: 6237335
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6237473:-1
position: 6237473
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:6234518-6234712:-1:exon

position:6234518:-1
position: 6234518
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6234712:-1
position: 6234712
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:6168886-6169326:-1:exon

position:6169326:-1
position: 6169326
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

eepd1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 451745
gene: eepd1
inference: similar to RNA sequence (same species):INSD:GELZ01014679.1
exception: annotated by transcript or proteomic data
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: added 158 bases not found in genome assembly; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 2
product: endonuclease/exonuclease/phosphatase family domain-containing protein 1
translation: MVSVRPDVEPLLGLRDGKSVVRLGSWSLQDFSCDKANNPGVREVVSMTLLENDIKLLAVQDLLEREALHKICLELNQGTLASVRRWKWPQGLWKSIVSDKPTGHSSKGRIYSGFLWDASSGIDLKDAWVLESAAVNGNGNDADPRLYLAHFSVGSLELTVVNVHLSTTAAAGESISKNNSSEEAKCQCFPHSLLETLKGEQPLLLLGDFGCSPQSSELDVLRKEKLCALVPSTQFTNISTRTPQGTCCLDNIWLSRSLKKVYTGHCLVVREGLTNPWIPDNWSWGGVASNHCPVVAEFYTHLSCKELSRVAAVDRGEVLSKHER
SIO_010081: eepd1
subclass of: SO_0000673
so part of: eepd1
location: complement(join(6169142..6169326,6234518..6234712,6237335..6237473,6239677..6239811,6240750..6240860,6268799..>6268850))
location: region:6169142-6268850:-1
so has part: feature:6268799-6268850:-1:exon
so has part: feature:6240750-6240860:-1:exon
so has part: feature:6239677-6239811:-1:exon
so has part: feature:6237335-6237473:-1:exon
so has part: feature:6234518-6234712:-1:exon
so has part: feature:6169142-6169326:-1:exon

XP_037548687.1
type: Protein
SIO_000068: ncbiprotein

position:6169142:-1
position: 6169142
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6268799-6268850:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6240750-6240860:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6239677-6239811:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6237335-6237473:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6234518-6234712:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:6169142-6169326:-1:exon

LOC119425236
type: Gene
subclass of: SO_0000704
RO_0002162: 451745
gene: LOC119425236
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(6172267..6174069)
location: region:6172267-6174069:-1
so has part: feature:6172267-6174069:-1:exon
subclass of: SO_0000010

119425236
type: Gene
SIO_000068: ncbigene

position:6172267:-1
position: 6172267
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6174069:-1
position: 6174069
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6172267-6174069:-1:exon

LOC119425236
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 451745
gene: LOC119425236
product: uncharacterized LOC119425236
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_037692760.1
SIO_010081: LOC119425236
subclass of: SO_0000673
so part of: LOC119425236
location: complement(join(6172267..6172848,6173592..6174069))
location: region:6172267-6174069:-1
so has part: feature:6173592-6174069:-1:exon
so has part: feature:6172267-6172848:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6173592-6174069:-1:exon

position:6173592:-1
position: 6173592
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:6172267-6172848:-1:exon

position:6172848:-1
position: 6172848
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC119425236
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 451745
gene: LOC119425236
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC119425236
translation: MSSGSTCAVVGCHNSSRKLKDELETYCFAHQQLRKACVCPARYELHSMPRKEDRKRAWLAALKLKYPPKRVYVCSFHFIDKKPTELHPDPELYLGYDRAPPKKRRQLIRTTVSQTASSNFDKTAESVPECIVDSPSVIPDLASVSTQPPGPHLHSVHTQWEDPSLKDHHQYCNTSGRKDVQDKTTQCDEVAFFLLQNDADALLYTGIALETFNTLVSALEGDDNNEFTMPVQDQVLITLMKIKTNRVCSP
SIO_010081: LOC119425236
subclass of: SO_0000673
so part of: LOC119425236
location: complement(join(6172481..6172848,6173592..6173976))
location: region:6172481-6173976:-1
so has part: feature:6173592-6173976:-1:exon
so has part: feature:6172481-6172848:-1:exon

XP_037548688.1
type: Protein
SIO_000068: ncbiprotein

position:6172481:-1
position: 6172481
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6173976:-1
position: 6173976
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6173592-6173976:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6172481-6172848:-1:exon

ppp1r10
type: Gene
subclass of: SO_0000704
RO_0002162: 451745
gene: ppp1r10
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(6313658..6321730)
location: region:6313658-6321730:-1
so has part: feature:6313658-6321730:-1:exon
subclass of: SO_0000010

119425768
type: Gene
SIO_000068: ncbigene

position:6313658:-1
position: 6313658
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6321730:-1
position: 6321730
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6313658-6321730:-1:exon

ppp1r10
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 451745
gene: ppp1r10
product: protein phosphatase 1, regulatory subunit 10
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_037693316.1
SIO_010081: ppp1r10
subclass of: SO_0000673
so part of: ppp1r10
location: complement(join(6313658..6314334,6315064..6315417,6315502..6315619,6315689..6315898,6315976..6316051,6316122..6316368,6316446..6316589,6316670..6316829,6317173..6317297,6317373..6317476,6317824..6318058,6318148..6318237,6318402..6318453,6318526..6318661,6319125..6319211,6319289..6319397,6321274..6321551,6321710..6321730))
location: region:6313658-6321730:-1
so has part: feature:6321710-6321730:-1:exon
so has part: feature:6321274-6321551:-1:exon
so has part: feature:6319289-6319397:-1:exon
so has part: feature:6319125-6319211:-1:exon
so has part: feature:6318526-6318661:-1:exon
so has part: feature:6318402-6318453:-1:exon
so has part: feature:6318148-6318237:-1:exon
so has part: feature:6317824-6318058:-1:exon
so has part: feature:6317373-6317476:-1:exon
so has part: feature:6317173-6317297:-1:exon
so has part: feature:6316670-6316829:-1:exon
so has part: feature:6316446-6316589:-1:exon
so has part: feature:6316122-6316368:-1:exon
so has part: feature:6315976-6316051:-1:exon
so has part: feature:6315689-6315898:-1:exon
so has part: feature:6315502-6315619:-1:exon
so has part: feature:6315064-6315417:-1:exon
so has part: feature:6313658-6314334:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6321710-6321730:-1:exon

position:6321710:-1
position: 6321710
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:6321274-6321551:-1:exon

position:6321274:-1
position: 6321274
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6321551:-1
position: 6321551
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:6319289-6319397:-1:exon

position:6319289:-1
position: 6319289
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6319397:-1
position: 6319397
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:6319125-6319211:-1:exon

position:6319125:-1
position: 6319125
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6319211:-1
position: 6319211
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:6318526-6318661:-1:exon

position:6318526:-1
position: 6318526
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6318661:-1
position: 6318661
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:6318402-6318453:-1:exon

position:6318402:-1
position: 6318402
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6318453:-1
position: 6318453
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:6318148-6318237:-1:exon

position:6318148:-1
position: 6318148
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6318237:-1
position: 6318237
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:6317824-6318058:-1:exon

position:6317824:-1
position: 6317824
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6318058:-1
position: 6318058
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:6317373-6317476:-1:exon

position:6317373:-1
position: 6317373
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6317476:-1
position: 6317476
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:6317173-6317297:-1:exon

position:6317173:-1
position: 6317173
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6317297:-1
position: 6317297
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:6316670-6316829:-1:exon

position:6316670:-1
position: 6316670
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6316829:-1
position: 6316829
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:6316446-6316589:-1:exon

position:6316446:-1
position: 6316446
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6316589:-1
position: 6316589
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:6316122-6316368:-1:exon

position:6316122:-1
position: 6316122
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6316368:-1
position: 6316368
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:6315976-6316051:-1:exon

position:6315976:-1
position: 6315976
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6316051:-1
position: 6316051
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:6315689-6315898:-1:exon

position:6315689:-1
position: 6315689
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6315898:-1
position: 6315898
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:6315502-6315619:-1:exon

position:6315502:-1
position: 6315502
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6315619:-1
position: 6315619
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:6315064-6315417:-1:exon

position:6315064:-1
position: 6315064
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6315417:-1
position: 6315417
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:6313658-6314334:-1:exon

position:6314334:-1
position: 6314334
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

ppp1r10
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 451745
gene: ppp1r10
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: serine/threonine-protein phosphatase 1 regulatory subunit 10
translation: MAGGPVDPREILKGVEALLGKDGELRSLEGVPKVFGLMKASAKMASRCMYLNILLQTKSHDVLNRFIRVGGYKLLNAWLTYSKSSNNTPLLQLILLTLQKLPLKVDHLKQNNTAKLVKQLSKSADTEELRKLAAVLVDGWMATIRSQSVSGSGTSTADKKKKREESKVLVRDVKEKSGDDEKKKEKPKAHAPSHTKIRSIGLEMETPTPTLAKKTPPAPQLGNKYNIKPPLLKRPSTGPSDAPPLEKKYKPLNTPSNSTKEIKVKLIPAPPMEGTGFLDALNSAPVPGIKIKKKKSGAGPANAKAASPTSNKTNPFDNKAAGYSSSAAKPSSPEAAAAVSSADEKQEPEQPGTPVPAEDPETSSSSEKPNALAEPSGDDDNLTKKGKKKKNVHWAEEEQLKHYFYFDLDETERVNVNKIKDFGEAAKRELMMDRQTFEMARRLSHDAMEERVPWSQPRPLTLMGVLVTPGASSSEKLTQREREMSILQEIFLSKESVPDSPHEPDPEPYEPMPPRLIPLDEDSSMLDESYAEPMDTSAQQNSVLNPNETSKLPPVLANLMVNLGGSARSPQAPSAPNNPAVNVQELLSSIMGASGNQSAEDLIRQPDFSDKVKQLLGSLQQSQSQSGPPAVSPGLLGHGPGNNMPMQMPMNGGFPPNNSPGGPRFNHPPPPHNHGPPFNVGGGPHMMGPPPGHGRGGNVLGDDFMRGGAHRGGNFHRGGRGRGGELQSSSGFRGRGRGGPRGGHNNMNDMSNRPVCRHFMMKGSCRYDANCAFYHPGVNGPPLPPNHPANHRH
SIO_010081: ppp1r10
subclass of: SO_0000673
so part of: ppp1r10
location: complement(join(6314198..6314334,6315064..6315417,6315502..6315619,6315689..6315898,6315976..6316051,6316122..6316368,6316446..6316589,6316670..6316829,6317173..6317297,6317373..6317476,6317824..6318058,6318148..6318237,6318402..6318453,6318526..6318661,6319125..6319211,6319289..6319395))
location: region:6314198-6319395:-1
so has part: feature:6319289-6319395:-1:exon
so has part: feature:6319125-6319211:-1:exon
so has part: feature:6318526-6318661:-1:exon
so has part: feature:6318402-6318453:-1:exon
so has part: feature:6318148-6318237:-1:exon
so has part: feature:6317824-6318058:-1:exon
so has part: feature:6317373-6317476:-1:exon
so has part: feature:6317173-6317297:-1:exon
so has part: feature:6316670-6316829:-1:exon
so has part: feature:6316446-6316589:-1:exon
so has part: feature:6316122-6316368:-1:exon
so has part: feature:6315976-6316051:-1:exon
so has part: feature:6315689-6315898:-1:exon
so has part: feature:6315502-6315619:-1:exon
so has part: feature:6315064-6315417:-1:exon
so has part: feature:6314198-6314334:-1:exon

XP_037549244.1
type: Protein
SIO_000068: ncbiprotein

position:6314198:-1
position: 6314198
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6319395:-1
position: 6319395
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6319289-6319395:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6319125-6319211:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6318526-6318661:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6318402-6318453:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6318148-6318237:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:6317824-6318058:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:6317373-6317476:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:6317173-6317297:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:6316670-6316829:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:6316446-6316589:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:6316122-6316368:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:6315976-6316051:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:6315689-6315898:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:6315502-6315619:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:6315064-6315417:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:6314198-6314334:-1:exon

mrps18b
type: Gene
subclass of: SO_0000704
RO_0002162: 451745
gene: mrps18b
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 6325215..6341647
location: region:6325215-6341647:1
so has part: feature:6325215-6341647:1:exon
subclass of: SO_0000010

119425676
type: Gene
SIO_000068: ncbigene

position:6325215:1
position: 6325215
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6341647:1
position: 6341647
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6325215-6341647:1:exon

mrps18b
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 451745
gene: mrps18b
product: mitochondrial ribosomal protein S18B
inference: similar to RNA sequence (same species):INSD:GELZ01002662.1
exception: annotated by transcript or proteomic data
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 2 bases in 1 codon; added 330 bases not found in genome assembly; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 Proteins, and 74% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_037693218.1
SIO_010081: mrps18b
subclass of: SO_0000673
so part of: mrps18b
location: join(6325215..>6325335,<6334139..6334205,6334274..6334333,6341369..6341647)
location: region:6325215-6341647:1
so has part: feature:6325215-6325335:1:exon
so has part: feature:6334139-6334205:1:exon
so has part: feature:6334274-6334333:1:exon
so has part: feature:6341369-6341647:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6325215-6325335:1:exon

position:6325335:1
position: 6325335
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 2
SIO_000628: feature:6334139-6334205:1:exon

position:6334139:1
position: 6334139
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

position:6334205:1
position: 6334205
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:6334274-6334333:1:exon

position:6334274:1
position: 6334274
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6334333:1
position: 6334333
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:6341369-6341647:1:exon

position:6341369:1
position: 6341369
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

mrps18b
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 451745
gene: mrps18b
inference: similar to RNA sequence (same species):INSD:GELZ01002662.1
exception: annotated by transcript or proteomic data
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 2 bases in 1 codon; added 330 bases not found in genome assembly; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: 28S ribosomal protein S18b, mitochondrial
translation: MNFNLSPLTCRSXKMSASVRIMFKVFNRVFLSFSHQCRQNQFCLQKLSVTPPCPPVFAQSNQFFCKAASQQQETVAQPEEFSRYKDKPWDYPQSEEYIEKYGSQPVWAGYRRNHKGGIPPQKTRRTCIRADKICGNPCPICRDPNIIIHHQNVKLLQQFISPHTGLVYDPTRTGVCMKQQKRLNKAIHTARDQGLISFQVPHVDYSGEDYSNAHDAVGCTPPPPSSTSSDTWYTWYGRITPDEQLVAKVRKMYKPYLKS
SIO_010081: mrps18b
subclass of: SO_0000673
so part of: mrps18b
location: join(6325215..>6325335,<6334139..6334205,6334274..6334333,6341369..6341568)
location: region:6325215-6341568:1
so has part: feature:6325215-6325335:1:exon
so has part: feature:6334139-6334205:1:exon
so has part: feature:6334274-6334333:1:exon
so has part: feature:6341369-6341568:1:exon

XP_037549146.1
type: Protein
SIO_000068: ncbiprotein

position:6341568:1
position: 6341568
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6325215-6325335:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6334139-6334205:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6334274-6334333:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6341369-6341568:1:exon

abcf1
type: Gene
subclass of: SO_0000704
RO_0002162: 451745
gene: abcf1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(6341630..6454151)
location: region:6341630-6454151:-1
so has part: feature:6341630-6454151:-1:exon
subclass of: SO_0000010

119425674
type: Gene
SIO_000068: ncbigene

position:6341630:-1
position: 6341630
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6454151:-1
position: 6454151
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6341630-6454151:-1:exon

abcf1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 451745
gene: abcf1
product: ATP-binding cassette, sub-family F (GCN20), member 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 14 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_037693217.1
SIO_010081: abcf1
subclass of: SO_0000673
so part of: abcf1
location: complement(join(6341630..6341900,6343793..6343865,6343953..6344017,6344100..6344268,6344798..6344830,6344912..6344982,6349047..6349121,6351501..6351675,6374814..6374926,6376132..6376256,6376363..6376446,6391245..6391393,6416689..6416828,6416919..6417004,6451853..6451953,6452079..6452201,6452717..6452812,6454060..6454151))
location: region:6341630-6454151:-1
so has part: feature:6454060-6454151:-1:exon
so has part: feature:6452717-6452812:-1:exon
so has part: feature:6452079-6452201:-1:exon
so has part: feature:6451853-6451953:-1:exon
so has part: feature:6416919-6417004:-1:exon
so has part: feature:6416689-6416828:-1:exon
so has part: feature:6391245-6391393:-1:exon
so has part: feature:6376363-6376446:-1:exon
so has part: feature:6376132-6376256:-1:exon
so has part: feature:6374814-6374926:-1:exon
so has part: feature:6351501-6351675:-1:exon
so has part: feature:6349047-6349121:-1:exon
so has part: feature:6344912-6344982:-1:exon
so has part: feature:6344798-6344830:-1:exon
so has part: feature:6344100-6344268:-1:exon
so has part: feature:6343953-6344017:-1:exon
so has part: feature:6343793-6343865:-1:exon
so has part: feature:6341630-6341900:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6454060-6454151:-1:exon

position:6454060:-1
position: 6454060
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:6452717-6452812:-1:exon

position:6452717:-1
position: 6452717
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6452812:-1
position: 6452812
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:6452079-6452201:-1:exon

position:6452079:-1
position: 6452079
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6452201:-1
position: 6452201
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:6451853-6451953:-1:exon

position:6451853:-1
position: 6451853
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6451953:-1
position: 6451953
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:6416919-6417004:-1:exon

position:6416919:-1
position: 6416919
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6417004:-1
position: 6417004
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:6416689-6416828:-1:exon

position:6416689:-1
position: 6416689
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6416828:-1
position: 6416828
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:6391245-6391393:-1:exon

position:6391245:-1
position: 6391245
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6391393:-1
position: 6391393
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:6376363-6376446:-1:exon

position:6376363:-1
position: 6376363
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6376446:-1
position: 6376446
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:6376132-6376256:-1:exon

position:6376132:-1
position: 6376132
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6376256:-1
position: 6376256
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:6374814-6374926:-1:exon

position:6374814:-1
position: 6374814
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6374926:-1
position: 6374926
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:6351501-6351675:-1:exon

position:6351501:-1
position: 6351501
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6351675:-1
position: 6351675
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:6349047-6349121:-1:exon

position:6349047:-1
position: 6349047
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6349121:-1
position: 6349121
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:6344912-6344982:-1:exon

position:6344912:-1
position: 6344912
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6344982:-1
position: 6344982
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:6344798-6344830:-1:exon

position:6344798:-1
position: 6344798
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6344830:-1
position: 6344830
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:6344100-6344268:-1:exon

position:6344100:-1
position: 6344100
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6344268:-1
position: 6344268
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:6343953-6344017:-1:exon

position:6343953:-1
position: 6343953
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6344017:-1
position: 6344017
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:6343793-6343865:-1:exon

position:6343793:-1
position: 6343793
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6343865:-1
position: 6343865
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:6341630-6341900:-1:exon

position:6341900:-1
position: 6341900
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

abcf1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 451745
gene: abcf1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ATP-binding cassette sub-family F member 1
translation: MHDEEEEEEEEEEDDNGGDTMMSAEDIIADQAKQVPDDPYANLSKKEKKKKKKEREFERQIASVRAESALEGDFSISQAEMSSRQAMLENASDIKLERFSISAHGKELFINADLLIVAGRRYGLVGPNGKGKTTLLKHIANRALSIPPNIDVLLCEQEVVADDTPAVQAVLKADTRRLKLLEEEKQLQARLEKGEDAVLERLDKVYEELRAIGAAAAEAKARRILAGLSFTPEMQNRPTKRFSGGWRMRVSLARALFMEPTLLMLDEPTNHLDLNAVIWLNNYLQGWKKTLLIVSHDQSFLDDVCTDIIHLDNQKLYYYRGNYLTFKKMYKQKQKELQKQYDKQEKKLKDLKAGGKSTKQAEKQTKEALTRKQQKGKKKGPQEEESQEAPELLKRPKEYTVKFTFPNPPPLSPPILGLHSVDFGYEGQKPLFKNVDFGIDMDSRICIVGPNGVGKSTLLLLLTGKLNPIKGEMRKNHRLKVGFFNQQYADQLNMDEAPTEYLMRNFNLPYQDSRKCLGRFGLESHAHTIQISKLSGGQKARVVFAELSCRQPDVLILDEPTNNLDIESIDALSEAINEYKGAVIIVSHDARLITETQCQLWVVEERSVNQIDGDFDDYKREVLEALGETMVNKVNP
SIO_010081: abcf1
subclass of: SO_0000673
so part of: abcf1
location: complement(join(6341734..6341900,6343793..6343865,6343953..6344017,6344100..6344268,6344798..6344830,6344912..6344982,6349047..6349121,6351501..6351675,6374814..6374926,6376132..6376256,6376363..6376446,6391245..6391393,6416689..6416828,6416919..6417004,6451853..6451953,6452079..6452201,6452717..6452812,6454060..6454125))
location: region:6341734-6454125:-1
so has part: feature:6454060-6454125:-1:exon
so has part: feature:6452717-6452812:-1:exon
so has part: feature:6452079-6452201:-1:exon
so has part: feature:6451853-6451953:-1:exon
so has part: feature:6416919-6417004:-1:exon
so has part: feature:6416689-6416828:-1:exon
so has part: feature:6391245-6391393:-1:exon
so has part: feature:6376363-6376446:-1:exon
so has part: feature:6376132-6376256:-1:exon
so has part: feature:6374814-6374926:-1:exon
so has part: feature:6351501-6351675:-1:exon
so has part: feature:6349047-6349121:-1:exon
so has part: feature:6344912-6344982:-1:exon
so has part: feature:6344798-6344830:-1:exon
so has part: feature:6344100-6344268:-1:exon
so has part: feature:6343953-6344017:-1:exon
so has part: feature:6343793-6343865:-1:exon
so has part: feature:6341734-6341900:-1:exon

XP_037549145.1
type: Protein
SIO_000068: ncbiprotein

position:6341734:-1
position: 6341734
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6454125:-1
position: 6454125
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6454060-6454125:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6452717-6452812:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6452079-6452201:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6451853-6451953:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6416919-6417004:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:6416689-6416828:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:6391245-6391393:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:6376363-6376446:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:6376132-6376256:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:6374814-6374926:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:6351501-6351675:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:6349047-6349121:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:6344912-6344982:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:6344798-6344830:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:6344100-6344268:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:6343953-6344017:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:6343793-6343865:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:6341734-6341900:-1:exon

LOC119425677
type: Gene
subclass of: SO_0000704
RO_0002162: 451745
gene: LOC119425677
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: <6460052..>6462735
location: region:6460052-6462735:1
so has part: feature:6460052-6462735:1:exon
subclass of: SO_0000010

119425677
type: Gene
SIO_000068: ncbigene

position:6460052:1
position: 6460052
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

position:6462735:1
position: 6462735
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6460052-6462735:1:exon

LOC119425677
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 451745
gene: LOC119425677
product: ATP-binding cassette sub-family F member 1
inference: similar to RNA sequence (same species):INSD:GELZ01042093.1
exception: annotated by transcript or proteomic data
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: added 254 bases not found in genome assembly; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_037693219.1
SIO_010081: LOC119425677
subclass of: SO_0000673
so part of: LOC119425677
location: join(<6460052..6460141,6460727..6460777,6462649..>6462735)
location: region:6460052-6462735:1
so has part: feature:6460052-6460141:1:exon
so has part: feature:6460727-6460777:1:exon
so has part: feature:6462649-6462735:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6460052-6460141:1:exon

position:6460141:1
position: 6460141
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:6460727-6460777:1:exon

position:6460727:1
position: 6460727
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6460777:1
position: 6460777
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:6462649-6462735:1:exon

position:6462649:1
position: 6462649
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC119425677
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 451745
gene: LOC119425677
inference: similar to RNA sequence (same species):INSD:GELZ01042093.1
exception: annotated by transcript or proteomic data
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: added 165 bases not found in genome assembly; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ATP-binding cassette sub-family F member 1
translation: MLKLKKLSVQASDEEDEPVITTSKVSKKGGNIFAALSQGQSDEDEEEDLDDEDKPTKEEVERVKKKENSKSRKVKAGSKEEEADVDHSKGKCTTKTNQAEAKSKKGKADEQSRSMHDEEEEEEEEEDDNGG
SIO_010081: LOC119425677
subclass of: SO_0000673
so part of: LOC119425677
location: join(<6460052..6460141,6460727..6460777,6462649..>6462735)
location: region:6460052-6462735:1
so has part: feature:6460052-6460141:1:exon
so has part: feature:6460727-6460777:1:exon
so has part: feature:6462649-6462735:1:exon

XP_037549147.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:6460052-6460141:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6460727-6460777:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6462649-6462735:1:exon

LOC119426036
type: Gene
subclass of: SO_0000704
RO_0002162: 451745
gene: LOC119426036
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 6472695..6498266
location: region:6472695-6498266:1
so has part: feature:6472695-6498266:1:exon
subclass of: SO_0000010

119426036
type: Gene
SIO_000068: ncbigene

position:6472695:1
position: 6472695
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6498266:1
position: 6498266
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6472695-6498266:1:exon

LOC119426036
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 451745
gene: LOC119426036
product: ATP-binding cassette sub-family F member 1-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 74% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_037693597.1
SIO_010081: LOC119426036
subclass of: SO_0000673
so part of: LOC119426036
location: join(6472695..6472899,6474721..6474770,6474878..6474955,6475363..6475483,6475561..6475589,6498123..6498266)
location: region:6472695-6498266:1
so has part: feature:6472695-6472899:1:exon
so has part: feature:6474721-6474770:1:exon
so has part: feature:6474878-6474955:1:exon
so has part: feature:6475363-6475483:1:exon
so has part: feature:6475561-6475589:1:exon
so has part: feature:6498123-6498266:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6472695-6472899:1:exon

position:6472899:1
position: 6472899
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:6474721-6474770:1:exon

position:6474721:1
position: 6474721
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6474770:1
position: 6474770
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:6474878-6474955:1:exon

position:6474878:1
position: 6474878
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6474955:1
position: 6474955
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:6475363-6475483:1:exon

position:6475363:1
position: 6475363
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6475483:1
position: 6475483
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:6475561-6475589:1:exon

position:6475561:1
position: 6475561
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6475589:1
position: 6475589
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:6498123-6498266:1:exon

position:6498123:1
position: 6498123
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC119426036
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 451745
gene: LOC119426036
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ATP-binding cassette sub-family F member 1-like
translation: MPKKAKEQSEWVDDDAATGAAEKTVKKGKKDKKAKKNFFEELSTDSKPEMVEEVAVKEPQGKQKKKRELKKGKPADAGEKDDEDVMLKLKKLSVQASDEEDEPVITTSKVSKKYSSSGHSRGLYRCEAKRYGLTQAAQVVVLSQYVEWTSGEQFPICVHR
SIO_010081: LOC119426036
subclass of: SO_0000673
so part of: LOC119426036
location: join(6472839..6472899,6474721..6474770,6474878..6474955,6475363..6475483,6475561..6475589,6498123..6498266)
location: region:6472839-6498266:1
so has part: feature:6472839-6472899:1:exon
so has part: feature:6474721-6474770:1:exon
so has part: feature:6474878-6474955:1:exon
so has part: feature:6475363-6475483:1:exon
so has part: feature:6475561-6475589:1:exon
so has part: feature:6498123-6498266:1:exon

XP_037549525.1
type: Protein
SIO_000068: ncbiprotein

position:6472839:1
position: 6472839
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6472839-6472899:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6474721-6474770:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6474878-6474955:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6475363-6475483:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6475561-6475589:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:6498123-6498266:1:exon

LOC119425571
type: Gene
subclass of: SO_0000704
RO_0002162: 451745
gene: LOC119425571
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 6539028..6539825
location: region:6539028-6539825:1
so has part: feature:6539028-6539825:1:exon
subclass of: SO_0000011

119425571
type: Gene
SIO_000068: ncbigene

position:6539028:1
position: 6539028
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6539825:1
position: 6539825
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6539028-6539825:1:exon

LOC119425571
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 451745
nc RNA class: lncRNA
gene: LOC119425571
product: uncharacterized LOC119425571
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XR_005187568.1
SIO_010081: LOC119425571
subclass of: SO_0000673
so part of: LOC119425571
location: join(6539028..6539118,6539245..6539351,6539454..6539540,6539790..6539825)
location: region:6539028-6539825:1
so has part: feature:6539028-6539118:1:exon
so has part: feature:6539245-6539351:1:exon
so has part: feature:6539454-6539540:1:exon
so has part: feature:6539790-6539825:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6539028-6539118:1:exon

position:6539118:1
position: 6539118
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:6539245-6539351:1:exon

position:6539245:1
position: 6539245
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6539351:1
position: 6539351
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:6539454-6539540:1:exon

position:6539454:1
position: 6539454
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6539540:1
position: 6539540
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:6539790-6539825:1:exon

position:6539790:1
position: 6539790
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

ngly1
type: Gene
subclass of: SO_0000704
RO_0002162: 451745
gene: ngly1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(6713481..6779839)
location: region:6713481-6779839:-1
so has part: feature:6713481-6779839:-1:exon
subclass of: SO_0000010

119426009
type: Gene
SIO_000068: ncbigene

position:6713481:-1
position: 6713481
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6779839:-1
position: 6779839
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6713481-6779839:-1:exon

ngly1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 451745
gene: ngly1
product: N-glycanase 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 87% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_037693570.1
SIO_010081: ngly1
subclass of: SO_0000673
so part of: ngly1
location: complement(join(6713481..6713782,6713870..6714047,6714864..6715049,6731357..6731542,6731616..6731726,6750189..6750334,6750547..6750668,6750889..6751105,6756588..6756750,6775114..6775317,6775798..6775912,6779682..6779839))
location: region:6713481-6779839:-1
so has part: feature:6779682-6779839:-1:exon
so has part: feature:6775798-6775912:-1:exon
so has part: feature:6775114-6775317:-1:exon
so has part: feature:6756588-6756750:-1:exon
so has part: feature:6750889-6751105:-1:exon
so has part: feature:6750547-6750668:-1:exon
so has part: feature:6750189-6750334:-1:exon
so has part: feature:6731616-6731726:-1:exon
so has part: feature:6731357-6731542:-1:exon
so has part: feature:6714864-6715049:-1:exon
so has part: feature:6713870-6714047:-1:exon
so has part: feature:6713481-6713782:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6779682-6779839:-1:exon

position:6779682:-1
position: 6779682
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:6775798-6775912:-1:exon

position:6775798:-1
position: 6775798
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6775912:-1
position: 6775912
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:6775114-6775317:-1:exon

position:6775114:-1
position: 6775114
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6775317:-1
position: 6775317
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:6756588-6756750:-1:exon

position:6756588:-1
position: 6756588
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6756750:-1
position: 6756750
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:6750889-6751105:-1:exon

position:6750889:-1
position: 6750889
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6751105:-1
position: 6751105
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:6750547-6750668:-1:exon

position:6750547:-1
position: 6750547
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6750668:-1
position: 6750668
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:6750189-6750334:-1:exon

position:6750189:-1
position: 6750189
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6750334:-1
position: 6750334
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:6731616-6731726:-1:exon

position:6731616:-1
position: 6731616
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6731726:-1
position: 6731726
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:6731357-6731542:-1:exon

position:6731357:-1
position: 6731357
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6731542:-1
position: 6731542
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:6714864-6715049:-1:exon

position:6714864:-1
position: 6714864
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6715049:-1
position: 6715049
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:6713870-6714047:-1:exon

position:6713870:-1
position: 6713870
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6714047:-1
position: 6714047
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:6713481-6713782:-1:exon

position:6713782:-1
position: 6713782
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

ngly1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 451745
gene: ngly1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: peptide-N(4)-(N-acetyl-beta- glucosaminyl)asparagine amidase
translation: MSVSPAITSLCENPNEVFLDVAKLLLTYADNILRNPNEEKYRSIRIGNPTFSTKLLPIKGAVECLFEMGFQEAETHLVFPQSASVEQLRLIRESIAAELDLRMRTDPAAPHAVALPMAPHSSAAATTRPAAPPVQQPSSLDSSMSFLVTLQSNFQHVLQYENPKLQQKTRSVIPQQQLVSAAQHNLNEMKEADPGCKLGLEDFLVLELLRWFKQNFSWVDCLPCSQCGGPTQHGSSLSPTAEDLRWGAQRVENHFCGSCQLSTRFPRYNHPEKLLETRRGRCGEWANCFTLCCIAVGLEARYIWDSTDHVWTEIFSVSQRRWLHCDSCENVCDKPLLYEVGWGKKLAYVLAFSKDQVVDVTWRYSCKHPEVLSRRTRVKEAWLLHTINRLNAARQQSLSLDRKTELTERLLVELVEFISPKKPKAGELGGRNSGSLAWRLARGETEAAETKTTAQVSAFVFTPTEKEKKERLLHVRYVSSKDQYCRVSSCSETIQNWDQCVWDKESVFRKVENDWKMAYIARTEGSLVGKIRWKFDFAPAGLKIKSVSIMAYSQTFQSGKVCWLLQSGQSSAEFPGDGTLQSFPSWSSSSELFVVAELSGGEGDLSWQHSQLFRQSLEEQEEPSFEVIINLQDD
SIO_010081: ngly1
subclass of: SO_0000673
so part of: ngly1
location: complement(join(6713607..6713782,6713870..6714047,6714864..6715049,6731357..6731542,6731616..6731726,6750189..6750334,6750547..6750668,6750889..6751105,6756588..6756750,6775114..6775317,6775798..6775912,6779682..6779782))
location: region:6713607-6779782:-1
so has part: feature:6779682-6779782:-1:exon
so has part: feature:6775798-6775912:-1:exon
so has part: feature:6775114-6775317:-1:exon
so has part: feature:6756588-6756750:-1:exon
so has part: feature:6750889-6751105:-1:exon
so has part: feature:6750547-6750668:-1:exon
so has part: feature:6750189-6750334:-1:exon
so has part: feature:6731616-6731726:-1:exon
so has part: feature:6731357-6731542:-1:exon
so has part: feature:6714864-6715049:-1:exon
so has part: feature:6713870-6714047:-1:exon
so has part: feature:6713607-6713782:-1:exon

XP_037549498.1
type: Protein
SIO_000068: ncbiprotein

position:6713607:-1
position: 6713607
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6779782:-1
position: 6779782
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6779682-6779782:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6775798-6775912:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6775114-6775317:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6756588-6756750:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6750889-6751105:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:6750547-6750668:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:6750189-6750334:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:6731616-6731726:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:6731357-6731542:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:6714864-6715049:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:6713870-6714047:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:6713607-6713782:-1:exon

oxsm
type: Gene
subclass of: SO_0000704
RO_0002162: 451745
gene: oxsm
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 6780417..6784808
location: region:6780417-6784808:1
so has part: feature:6780417-6784808:1:exon
subclass of: SO_0000010

119425310
type: Gene
SIO_000068: ncbigene

position:6780417:1
position: 6780417
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6784808:1
position: 6784808
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6780417-6784808:1:exon

oxsm
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 451745
gene: oxsm
product: 3-oxoacyl-ACP synthase, mitochondrial
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_037692830.1
SIO_010081: oxsm
subclass of: SO_0000673
so part of: oxsm
location: join(6780417..6781511,6784367..6784808)
location: region:6780417-6784808:1
so has part: feature:6780417-6781511:1:exon
so has part: feature:6784367-6784808:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6780417-6781511:1:exon

position:6781511:1
position: 6781511
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:6784367-6784808:1:exon

position:6784367:1
position: 6784367
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

oxsm
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 451745
gene: oxsm
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: 3-oxoacyl-[acyl-carrier-protein] synthase, mitochondrial
translation: MSSVFLSGWTNLQLRPQSSGALLRKVLFCPSHHPRQQLSGRQPRRRVVITGIGLVSPLGTGTALPWDCLIQGQSGIVALDSEEYRGVPCKVAALVSKGTNEGQFWGERFATRGEINTMSPATVMALGAAQLALDDSGWYPQSPEDQLNTGVAVGMGMVSLEEIARTSAAFRDEGYNKVSPFFVPRILVNMAAGHISIKHKLKGPNHAVSTACTTGAHAVGDAARFIAHGDAVAMVTGGTESCVGPLSIAGFARARALATKWNDMPTLASRPFHPEREGFVMGEGAAVLLLEELEHALRRGAKIYAEVLGYGLSGDASHITAPTADGDGPFRCMSAALRDAGVSPADVTYVNAHATSTPLGDAAENAAIKRLFQSSADSLAVSSTKGATGHLLGAAGALEMAFTALACYHGVLPPTLNLDRTEPEFNLNYVPCTAQSWQPQGPRVALTNSFGFGGTNASLCLSSFR
SIO_010081: oxsm
subclass of: SO_0000673
so part of: oxsm
location: join(6780520..6781511,6784367..6784772)
location: region:6780520-6784772:1
so has part: feature:6780520-6781511:1:exon
so has part: feature:6784367-6784772:1:exon

XP_037548758.1
type: Protein
SIO_000068: ncbiprotein

position:6780520:1
position: 6780520
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6784772:1
position: 6784772
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6780520-6781511:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6784367-6784772:1:exon

top2b
type: Gene
subclass of: SO_0000704
RO_0002162: 451745
gene: top2b
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 6815537..7014289
location: region:6815537-7014289:1
so has part: feature:6815537-7014289:1:exon
subclass of: SO_0000010

119425586
type: Gene
SIO_000068: ncbigene

position:6815537:1
position: 6815537
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7014289:1
position: 7014289
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6815537-7014289:1:exon

top2b
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 451745
gene: top2b
product: DNA topoisomerase II beta
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_037693118.1
SIO_010081: top2b
subclass of: SO_0000673
so part of: top2b
location: join(6815537..6816044,6823814..6823978,6838198..6838288,6846115..6846178,6853292..6853437,6875947..6876044,6897286..6897498,6906352..6906525,6906608..6906709,6906796..6906933,6907024..6907162,6925004..6925161,6926709..6926834,6926912..6927022,6927121..6927226,6927307..6927416,6928280..6928372,6928488..6928602,6928731..6928852,6931823..6931971,6940505..6940736,6942469..6942603,6942680..6942880,6942968..6943163,6958362..6958453,6959449..6959604,6959774..6959857,6980019..6980213,6980278..6980404,6980485..6980643,7004681..7004894,7005005..7005084,7008527..7008610,7009148..7009276,7009349..7009434,7013475..7014289)
location: region:6815537-7014289:1
so has part: feature:6815537-6816044:1:exon
so has part: feature:6823814-6823978:1:exon
so has part: feature:6838198-6838288:1:exon
so has part: feature:6846115-6846178:1:exon
so has part: feature:6853292-6853437:1:exon
so has part: feature:6875947-6876044:1:exon
so has part: feature:6897286-6897498:1:exon
so has part: feature:6906352-6906525:1:exon
so has part: feature:6906608-6906709:1:exon
so has part: feature:6906796-6906933:1:exon
so has part: feature:6907024-6907162:1:exon
so has part: feature:6925004-6925161:1:exon
so has part: feature:6926709-6926834:1:exon
so has part: feature:6926912-6927022:1:exon
so has part: feature:6927121-6927226:1:exon
so has part: feature:6927307-6927416:1:exon
so has part: feature:6928280-6928372:1:exon
so has part: feature:6928488-6928602:1:exon
so has part: feature:6928731-6928852:1:exon
so has part: feature:6931823-6931971:1:exon
so has part: feature:6940505-6940736:1:exon
so has part: feature:6942469-6942603:1:exon
so has part: feature:6942680-6942880:1:exon
so has part: feature:6942968-6943163:1:exon
so has part: feature:6958362-6958453:1:exon
so has part: feature:6959449-6959604:1:exon
so has part: feature:6959774-6959857:1:exon
so has part: feature:6980019-6980213:1:exon
so has part: feature:6980278-6980404:1:exon
so has part: feature:6980485-6980643:1:exon
so has part: feature:7004681-7004894:1:exon
so has part: feature:7005005-7005084:1:exon
so has part: feature:7008527-7008610:1:exon
so has part: feature:7009148-7009276:1:exon
so has part: feature:7009349-7009434:1:exon
so has part: feature:7013475-7014289:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6815537-6816044:1:exon

position:6816044:1
position: 6816044
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:6823814-6823978:1:exon

position:6823814:1
position: 6823814
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6823978:1
position: 6823978
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:6838198-6838288:1:exon

position:6838198:1
position: 6838198
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6838288:1
position: 6838288
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:6846115-6846178:1:exon

position:6846115:1
position: 6846115
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6846178:1
position: 6846178
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:6853292-6853437:1:exon

position:6853292:1
position: 6853292
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6853437:1
position: 6853437
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:6875947-6876044:1:exon

position:6875947:1
position: 6875947
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6876044:1
position: 6876044
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:6897286-6897498:1:exon

position:6897286:1
position: 6897286
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6897498:1
position: 6897498
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:6906352-6906525:1:exon

position:6906352:1
position: 6906352
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6906525:1
position: 6906525
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:6906608-6906709:1:exon

position:6906608:1
position: 6906608
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6906709:1
position: 6906709
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:6906796-6906933:1:exon

position:6906796:1
position: 6906796
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6906933:1
position: 6906933
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:6907024-6907162:1:exon

position:6907024:1
position: 6907024
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6907162:1
position: 6907162
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:6925004-6925161:1:exon

position:6925004:1
position: 6925004
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6925161:1
position: 6925161
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:6926709-6926834:1:exon

position:6926709:1
position: 6926709
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6926834:1
position: 6926834
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:6926912-6927022:1:exon

position:6926912:1
position: 6926912
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6927022:1
position: 6927022
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:6927121-6927226:1:exon

position:6927121:1
position: 6927121
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6927226:1
position: 6927226
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:6927307-6927416:1:exon

position:6927307:1
position: 6927307
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6927416:1
position: 6927416
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:6928280-6928372:1:exon

position:6928280:1
position: 6928280
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6928372:1
position: 6928372
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:6928488-6928602:1:exon

position:6928488:1
position: 6928488
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6928602:1
position: 6928602
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:6928731-6928852:1:exon

position:6928731:1
position: 6928731
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6928852:1
position: 6928852
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:6931823-6931971:1:exon

position:6931823:1
position: 6931823
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6931971:1
position: 6931971
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:6940505-6940736:1:exon

position:6940505:1
position: 6940505
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6940736:1
position: 6940736
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:6942469-6942603:1:exon

position:6942469:1
position: 6942469
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6942603:1
position: 6942603
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:6942680-6942880:1:exon

position:6942680:1
position: 6942680
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6942880:1
position: 6942880
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:6942968-6943163:1:exon

position:6942968:1
position: 6942968
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6943163:1
position: 6943163
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:6958362-6958453:1:exon

position:6958362:1
position: 6958362
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6958453:1
position: 6958453
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 26
SIO_000628: feature:6959449-6959604:1:exon

position:6959449:1
position: 6959449
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6959604:1
position: 6959604
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 27
SIO_000628: feature:6959774-6959857:1:exon

position:6959774:1
position: 6959774
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6959857:1
position: 6959857
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 28
SIO_000628: feature:6980019-6980213:1:exon

position:6980019:1
position: 6980019
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6980213:1
position: 6980213
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 29
SIO_000628: feature:6980278-6980404:1:exon

position:6980278:1
position: 6980278
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6980404:1
position: 6980404
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 30
SIO_000628: feature:6980485-6980643:1:exon

position:6980485:1
position: 6980485
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6980643:1
position: 6980643
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 31
SIO_000628: feature:7004681-7004894:1:exon

position:7004681:1
position: 7004681
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7004894:1
position: 7004894
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 32
SIO_000628: feature:7005005-7005084:1:exon

position:7005005:1
position: 7005005
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7005084:1
position: 7005084
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 33
SIO_000628: feature:7008527-7008610:1:exon

position:7008527:1
position: 7008527
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7008610:1
position: 7008610
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 34
SIO_000628: feature:7009148-7009276:1:exon

position:7009148:1
position: 7009148
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7009276:1
position: 7009276
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 35
SIO_000628: feature:7009349-7009434:1:exon

position:7009349:1
position: 7009349
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7009434:1
position: 7009434
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 36
SIO_000628: feature:7013475-7014289:1:exon

position:7013475:1
position: 7013475
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

top2b
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 451745
gene: top2b
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: DNA topoisomerase 2-beta
translation: MSNGAAGNGGLSWMEAANDRGDVGKMEGTKKDKAGSKLSVERVYQKKTQLEHILLRPDSYIGSVEPLTQQMWVFDEDVGMNQREITYVPGLYKIFDEILVNAADNKQRDKNMTAIKITIDPESNTITIWNNGKGIPVVEHKEEKMYVPALIFGTLLTSSNYNDNEKKVTGGRNGYGAKLCNIFSLKFTVETACKEYRHSFKQTWQNNMMKTADPKVKFFDGEDFTCVTFQPDLSKFKMEKLDRDIVALLTRRAYDVAGSCKGVKVSLNSKKLPVTGFRSYVDLYVKDKLDETGVPLKVVHEMVNERWDVCLTMSEKGFQQISFVNSIATTKGGRHIDYVVDQIVTKLIEVVKKKNKAGVSVKPFQVKNHIWVFVNSLIENPTFDSQTKENMTLQMKSFGSKCLLSEKFVRAATNCGIVESILNWVKFKAQTQLNKKCSSVKHSKIKGIPKLDDANDAGGKHSSECTLILTEGDSAKSLAVSGLGVIGRDRYGVFPLRGKILNVREASHKQIMENAEINNIIKIVGLQYKKSYDDAESLRSLRYGRIMIMTDQDQDGSHIKGLLINFFHHNWPSLLKHTFLEQFITPIVKATKNKQELSFYSLPEFEEWKKQTDNFKTWHIKYYKGLGTSTSKEAKEYFADMERHRITFKYNGAEDDAAITLAFSKKKIDDRKEWLTNFMEDRRQRRMHGLPEKYLYGTQAKHLSYNDFINKELILFSNSDNERSIPSLVDGLKPGQRKVLFTCLKRNDKREVKVAQLAGSVAEMSAYHHGEQALMMTIVNLAQSFVGSNNVNILQPLGQFGTRINGGKDAASPRYIFTMLSPLAKLLFPAVDSNLLKFLYDDNQKVEPEWFIPIIPMVLVNGAEGIGTGWACKIPNYDPREIVNNINRMLNHQDPLPMLPNYKNFKGVIHELGHNQYLVSGEVSVLDKNTVEITELPVRTWTQAYKESVLEPMLLGSDKTPALINDYKEYHTDATVKFVVRMSEEKLAQAEAVGLHKIFKLQSSLTCNSMVLFDHMGCLKRYDSVQDILKEFFELRLHYYKLRKDWLLGSLGSEAAKLSNQARFVLEKIEGKISIENKSKRELIRMLVQKGFESDPVAAWTKAQEKTLEEDYPDGNESDSSVDFGSSSGPNFNYILNMPLWCLTKEKVEELLKQRDQKRTELHGLQRKSPEDLWKEDLAVFIEELDNVEAQEKEELNLGKAVKLVKGKVGKPKVKKMNLEETLPSPFGRRVDPPTQPIKSDAAKKLTKKKKGDSNLAVKLEFEDNGVGGEGTTGENSVSKPKAPRVKKEKKEPGAPRIRKPPAPKGASVKKVKKRNPWSDDESKSDNDLEENEPIIPRETKSQRASASKPKYTFDFSEEEEEEEEADEEENGDDEAASSLARFVKDDFGCSDSKDRFSDQNDEDDDEDSYSPLKQKPTLAPAAQKKVTSIFSSKSVFSKKSNNSEGSRSDSDDNSPAFSTYSSSSVFDAAKKAKKSSDAAPKPKKTPAPKAKRPDKSIWDSESDTESKKTAPALKGKGRGRKRKDSGSEDEYSPVKKSAKPAGRKSQKPPSDDEDDHSLSAVKAQSWDRPGRARKEVKYFHKSDNEEEEEEDDMFD
SIO_010081: top2b
subclass of: SO_0000673
so part of: top2b
location: join(6816003..6816044,6823814..6823978,6838198..6838288,6846115..6846178,6853292..6853437,6875947..6876044,6897286..6897498,6906352..6906525,6906608..6906709,6906796..6906933,6907024..6907162,6925004..6925161,6926709..6926834,6926912..6927022,6927121..6927226,6927307..6927416,6928280..6928372,6928488..6928602,6928731..6928852,6931823..6931971,6940505..6940736,6942469..6942603,6942680..6942880,6942968..6943163,6958362..6958453,6959449..6959604,6959774..6959857,6980019..6980213,6980278..6980404,6980485..6980643,7004681..7004894,7005005..7005084,7008527..7008610,7009148..7009276,7009349..7009434,7013475..7013633)
location: region:6816003-7013633:1
so has part: feature:6816003-6816044:1:exon
so has part: feature:6823814-6823978:1:exon
so has part: feature:6838198-6838288:1:exon
so has part: feature:6846115-6846178:1:exon
so has part: feature:6853292-6853437:1:exon
so has part: feature:6875947-6876044:1:exon
so has part: feature:6897286-6897498:1:exon
so has part: feature:6906352-6906525:1:exon
so has part: feature:6906608-6906709:1:exon
so has part: feature:6906796-6906933:1:exon
so has part: feature:6907024-6907162:1:exon
so has part: feature:6925004-6925161:1:exon
so has part: feature:6926709-6926834:1:exon
so has part: feature:6926912-6927022:1:exon
so has part: feature:6927121-6927226:1:exon
so has part: feature:6927307-6927416:1:exon
so has part: feature:6928280-6928372:1:exon
so has part: feature:6928488-6928602:1:exon
so has part: feature:6928731-6928852:1:exon
so has part: feature:6931823-6931971:1:exon
so has part: feature:6940505-6940736:1:exon
so has part: feature:6942469-6942603:1:exon
so has part: feature:6942680-6942880:1:exon
so has part: feature:6942968-6943163:1:exon
so has part: feature:6958362-6958453:1:exon
so has part: feature:6959449-6959604:1:exon
so has part: feature:6959774-6959857:1:exon
so has part: feature:6980019-6980213:1:exon
so has part: feature:6980278-6980404:1:exon
so has part: feature:6980485-6980643:1:exon
so has part: feature:7004681-7004894:1:exon
so has part: feature:7005005-7005084:1:exon
so has part: feature:7008527-7008610:1:exon
so has part: feature:7009148-7009276:1:exon
so has part: feature:7009349-7009434:1:exon
so has part: feature:7013475-7013633:1:exon

XP_037549046.1
type: Protein
SIO_000068: ncbiprotein

position:6816003:1
position: 6816003
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7013633:1
position: 7013633
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6816003-6816044:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6823814-6823978:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6838198-6838288:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6846115-6846178:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6853292-6853437:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:6875947-6876044:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:6897286-6897498:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:6906352-6906525:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:6906608-6906709:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:6906796-6906933:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:6907024-6907162:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:6925004-6925161:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:6926709-6926834:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:6926912-6927022:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:6927121-6927226:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:6927307-6927416:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:6928280-6928372:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:6928488-6928602:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:6928731-6928852:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:6931823-6931971:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:6940505-6940736:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:6942469-6942603:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:6942680-6942880:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:6942968-6943163:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:6958362-6958453:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:6959449-6959604:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:6959774-6959857:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:6980019-6980213:1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:6980278-6980404:1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:6980485-6980643:1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:7004681-7004894:1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:7005005-7005084:1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:7008527-7008610:1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:7009148-7009276:1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:7009349-7009434:1:exon

urn:…
SIO_000300: 36
SIO_000628: feature:7013475-7013633:1:exon

LOC119426040
type: Gene
subclass of: SO_0000704
RO_0002162: 451745
gene: LOC119426040
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 7016565..7056722
location: region:7016565-7056722:1
so has part: feature:7016565-7056722:1:exon
subclass of: SO_0000010

119426040
type: Gene
SIO_000068: ncbigene

position:7016565:1
position: 7016565
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7056722:1
position: 7056722
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7016565-7056722:1:exon

LOC119426040
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 451745
gene: LOC119426040
product: interleukin enhancer-binding factor 2 homolog
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 30 Proteins, and 95% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_037693598.1
SIO_010081: LOC119426040
subclass of: SO_0000673
so part of: LOC119426040
location: join(7016565..7016600,7050193..7050295,7052276..7052341,7053001..7053117,7053221..7053299,7053386..7053473,7054096..7054157,7054243..7054357,7054751..7054841,7055297..7055452,7056578..7056722)
location: region:7016565-7056722:1
so has part: feature:7016565-7016600:1:exon
so has part: feature:7050193-7050295:1:exon
so has part: feature:7052276-7052341:1:exon
so has part: feature:7053001-7053117:1:exon
so has part: feature:7053221-7053299:1:exon
so has part: feature:7053386-7053473:1:exon
so has part: feature:7054096-7054157:1:exon
so has part: feature:7054243-7054357:1:exon
so has part: feature:7054751-7054841:1:exon
so has part: feature:7055297-7055452:1:exon
so has part: feature:7056578-7056722:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:7016565-7016600:1:exon

position:7016600:1
position: 7016600
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:7050193-7050295:1:exon

position:7050193:1
position: 7050193
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7050295:1
position: 7050295
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:7052276-7052341:1:exon

position:7052276:1
position: 7052276
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7052341:1
position: 7052341
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:7053001-7053117:1:exon

position:7053001:1
position: 7053001
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7053117:1
position: 7053117
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:7053221-7053299:1:exon

position:7053221:1
position: 7053221
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7053299:1
position: 7053299
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:7053386-7053473:1:exon

position:7053386:1
position: 7053386
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7053473:1
position: 7053473
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:7054096-7054157:1:exon

position:7054096:1
position: 7054096
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7054157:1
position: 7054157
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:7054243-7054357:1:exon

position:7054243:1
position: 7054243
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7054357:1
position: 7054357
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:7054751-7054841:1:exon

position:7054751:1
position: 7054751
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7054841:1
position: 7054841
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:7055297-7055452:1:exon

position:7055297:1
position: 7055297
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7055452:1
position: 7055452
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:7056578-7056722:1:exon

position:7056578:1
position: 7056578
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC119426040
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 451745
gene: LOC119426040
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: interleukin enhancer-binding factor 2 homolog
translation: MSRLDTSVLRLRQIEEVRQVGSYKKGTMTTGHNVADLVVILKILPTLEAVAALGNKVVETLRTLDPTEVLSMLTNETGFEISSADATVKILITTIPPNLRKLDPELHLDIKVLQSALAAIRHARWFEENASQSTVKVLIRLLKDLQLRFSGFEPLTPWILDLLGHSAVMNNPSRQPLSLNVAYRRCLQMLAAGLFLPGSVGITDPCESGNYRVHTVMTLEQQDMVCFTAQTLVRVLSHGGYRKILGLEGDASYLMTEMSTWDGVLVTPSEKVYKKPLERKEEEDEALEEGADEEDESMETQE
SIO_010081: LOC119426040
subclass of: SO_0000673
so part of: LOC119426040
location: join(7016565..7016600,7050193..7050295,7052276..7052341,7053001..7053117,7053221..7053299,7053386..7053473,7054096..7054157,7054243..7054357,7054751..7054841,7055297..7055448)
location: region:7016565-7055448:1
so has part: feature:7016565-7016600:1:exon
so has part: feature:7050193-7050295:1:exon
so has part: feature:7052276-7052341:1:exon
so has part: feature:7053001-7053117:1:exon
so has part: feature:7053221-7053299:1:exon
so has part: feature:7053386-7053473:1:exon
so has part: feature:7054096-7054157:1:exon
so has part: feature:7054243-7054357:1:exon
so has part: feature:7054751-7054841:1:exon
so has part: feature:7055297-7055448:1:exon

XP_037549526.1
type: Protein
SIO_000068: ncbiprotein

position:7055448:1
position: 7055448
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7016565-7016600:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7050193-7050295:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7052276-7052341:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7053001-7053117:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:7053221-7053299:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:7053386-7053473:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:7054096-7054157:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:7054243-7054357:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:7054751-7054841:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:7055297-7055448:1:exon

LOC119425279
type: Gene
subclass of: SO_0000704
RO_0002162: 451745
gene: LOC119425279
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(7058826..7065524)
location: region:7058826-7065524:-1
so has part: feature:7058826-7065524:-1:exon
subclass of: SO_0000010

119425279
type: Gene
SIO_000068: ncbigene

position:7058826:-1
position: 7058826
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7065524:-1
position: 7065524
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7058826-7065524:-1:exon

LOC119425279
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 451745
gene: LOC119425279
product: peroxisomal membrane protein 11B
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 16 Proteins, and 97% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_037692802.1
SIO_010081: LOC119425279
subclass of: SO_0000673
so part of: LOC119425279
location: complement(join(7058826..7059376,7060363..7060564,7060638..7060753,7065299..7065524))
location: region:7058826-7065524:-1
so has part: feature:7065299-7065524:-1:exon
so has part: feature:7060638-7060753:-1:exon
so has part: feature:7060363-7060564:-1:exon
so has part: feature:7058826-7059376:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:7065299-7065524:-1:exon

position:7065299:-1
position: 7065299
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:7060638-7060753:-1:exon

position:7060638:-1
position: 7060638
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7060753:-1
position: 7060753
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:7060363-7060564:-1:exon

position:7060363:-1
position: 7060363
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7060564:-1
position: 7060564
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:7058826-7059376:-1:exon

position:7059376:-1
position: 7059376
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC119425279
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 451745
gene: LOC119425279
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: peroxisomal membrane protein 11B
translation: MDSWVRFSAQSQAKERGFRAAQYACMLVGSALHRTSAAPELRSKINSLEAHMSLTRKLLRLGNSVEALQAAKRTIHLSDGVLRLCLTVSHLNRAMYFACDNVLWAGKTGLVAQLDQHKWSQRSFRYYLFALILSLTRDLYELRLLLDSETRSRGTKSPPPPSDSSALLTDPLSTSSSPSAGAPPLPLARLHRRLHQVLTVLYRNPPLLLDLLKNSCDLFIPLDRLGIYPTGPGFVGTCGLVSSVLSILTIVQPWLKLKP
SIO_010081: LOC119425279
subclass of: SO_0000673
so part of: LOC119425279
location: complement(join(7058971..7059376,7060363..7060564,7060638..7060753,7065299..7065354))
location: region:7058971-7065354:-1
so has part: feature:7065299-7065354:-1:exon
so has part: feature:7060638-7060753:-1:exon
so has part: feature:7060363-7060564:-1:exon
so has part: feature:7058971-7059376:-1:exon

XP_037548730.1
type: Protein
SIO_000068: ncbiprotein

position:7058971:-1
position: 7058971
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7065354:-1
position: 7065354
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7065299-7065354:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7060638-7060753:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7060363-7060564:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7058971-7059376:-1:exon

LOC119426041
type: Gene
subclass of: SO_0000704
RO_0002162: 451745
gene: LOC119426041
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(7066819..7068200)
location: region:7066819-7068200:-1
so has part: feature:7066819-7068200:-1:exon
subclass of: SO_0000010

119426041
type: Gene
SIO_000068: ncbigene

position:7066819:-1
position: 7066819
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7068200:-1
position: 7068200
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7066819-7068200:-1:exon

LOC119426041
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 451745
gene: LOC119426041
product: SNARE-associated protein Snapin-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 13 Proteins, and 79% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_037693599.1
SIO_010081: LOC119426041
subclass of: SO_0000673
so part of: LOC119426041
location: complement(join(7066819..7066926,7067345..7067463,7067587..7067633,7068160..7068200))
location: region:7066819-7068200:-1
so has part: feature:7068160-7068200:-1:exon
so has part: feature:7067587-7067633:-1:exon
so has part: feature:7067345-7067463:-1:exon
so has part: feature:7066819-7066926:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:7068160-7068200:-1:exon

position:7068160:-1
position: 7068160
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:7067587-7067633:-1:exon

position:7067587:-1
position: 7067587
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7067633:-1
position: 7067633
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:7067345-7067463:-1:exon

position:7067345:-1
position: 7067345
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7067463:-1
position: 7067463
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:7066819-7066926:-1:exon

position:7066926:-1
position: 7066926
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC119426041
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 451745
gene: LOC119426041
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: SNARE-associated protein Snapin-like
translation: MDGALLTSFRSFQLESQVELREHLDNLATELCRINENQKVALDLDPYVKKLLNARRRVVLVNNILQNAQERLRRLNHNVAKETARRKTMLEASGVFASRSPSKP
SIO_010081: LOC119426041
subclass of: SO_0000673
so part of: LOC119426041
location: complement(join(7066819..7066926,7067345..7067463,7067587..7067633,7068160..7068200))
location: region:7066819-7068200:-1
so has part: feature:7068160-7068200:-1:exon
so has part: feature:7067587-7067633:-1:exon
so has part: feature:7067345-7067463:-1:exon
so has part: feature:7066819-7066926:-1:exon

XP_037549527.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:7068160-7068200:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7067587-7067633:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7067345-7067463:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7066819-7066926:-1:exon

LOC119425896
type: Gene
subclass of: SO_0000704
RO_0002162: 451745
gene: LOC119425896
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: <7075948..7082495
location: region:7075948-7082495:1
so has part: feature:7075948-7082495:1:exon
subclass of: SO_0000010

119425896
type: Gene
SIO_000068: ncbigene

position:7075948:1
position: 7075948
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

position:7082495:1
position: 7082495
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7075948-7082495:1:exon

LOC119425896
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 451745
gene: LOC119425896
product: interleukin enhancer-binding factor 2 homolog
inference: similar to RNA sequence (same species):INSD:GELZ01021777.1
exception: annotated by transcript or proteomic data
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: added 419 bases not found in genome assembly; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 30 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_037693452.1
SIO_010081: LOC119425896
subclass of: SO_0000673
so part of: LOC119425896
location: join(<7075948..7076050,7078031..7078096,7078756..7078872,7078976..7079054,7079141..7079228,7079851..7079912,7079998..7080112,7080506..7080596,7081052..7081207,7082333..7082495)
location: region:7075948-7082495:1
so has part: feature:7075948-7076050:1:exon
so has part: feature:7078031-7078096:1:exon
so has part: feature:7078756-7078872:1:exon
so has part: feature:7078976-7079054:1:exon
so has part: feature:7079141-7079228:1:exon
so has part: feature:7079851-7079912:1:exon
so has part: feature:7079998-7080112:1:exon
so has part: feature:7080506-7080596:1:exon
so has part: feature:7081052-7081207:1:exon
so has part: feature:7082333-7082495:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:7075948-7076050:1:exon

position:7076050:1
position: 7076050
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:7078031-7078096:1:exon

position:7078031:1
position: 7078031
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7078096:1
position: 7078096
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:7078756-7078872:1:exon

position:7078756:1
position: 7078756
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7078872:1
position: 7078872
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:7078976-7079054:1:exon

position:7078976:1
position: 7078976
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7079054:1
position: 7079054
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:7079141-7079228:1:exon

position:7079141:1
position: 7079141
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7079228:1
position: 7079228
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:7079851-7079912:1:exon

position:7079851:1
position: 7079851
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7079912:1
position: 7079912
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:7079998-7080112:1:exon

position:7079998:1
position: 7079998
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7080112:1
position: 7080112
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:7080506-7080596:1:exon

position:7080506:1
position: 7080506
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7080596:1
position: 7080596
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:7081052-7081207:1:exon

position:7081052:1
position: 7081052
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7081207:1
position: 7081207
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:7082333-7082495:1:exon

position:7082333:1
position: 7082333
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC119425896
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 451745
gene: LOC119425896
inference: similar to RNA sequence (same species):INSD:GELZ01021777.1
exception: annotated by transcript or proteomic data
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: added 291 bases not found in genome assembly; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: interleukin enhancer-binding factor 2 homolog
translation: MRGDRGRGRGGRFGARGGIGQGYRPFVPHIPFDLYVCEMAFPRVKPAPDESTFSECLLKRNQDLSPTPAEQSSILSLVTKINNVIDNLIVAPGSFEVQIEEVRQVGSYKKGTMTTGHNVADLVVILKILPTLEAVAALGNKVVETLRTLDPTEVLSMLTNETGFEISSADATVKILITTIPPNLRKLDPELHLDIKVLQSALAAIRHARWFEENASQSTVKVLIRLLKDLQLRFSGFEPLTPWILDLLGHSAVMNNPSRQPLSLNVAYRRCLQMLAAGLFLPGSVGITDPCESGNYRVHTVMTLEQQDMVCFTAQTLVRVLSHGGYRKILGLEGDASYLMTEMSTWDGVLVTPSEKVYKKPLERKEEEDEALEEGADEEDESMETQE
SIO_010081: LOC119425896
subclass of: SO_0000673
so part of: LOC119425896
location: join(<7075948..7076050,7078031..7078096,7078756..7078872,7078976..7079054,7079141..7079228,7079851..7079912,7079998..7080112,7080506..7080596,7081052..7081203)
location: region:7075948-7081203:1
so has part: feature:7075948-7076050:1:exon
so has part: feature:7078031-7078096:1:exon
so has part: feature:7078756-7078872:1:exon
so has part: feature:7078976-7079054:1:exon
so has part: feature:7079141-7079228:1:exon
so has part: feature:7079851-7079912:1:exon
so has part: feature:7079998-7080112:1:exon
so has part: feature:7080506-7080596:1:exon
so has part: feature:7081052-7081203:1:exon

XP_037549380.1
type: Protein
SIO_000068: ncbiprotein

position:7081203:1
position: 7081203
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7075948-7076050:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7078031-7078096:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7078756-7078872:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7078976-7079054:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:7079141-7079228:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:7079851-7079912:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:7079998-7080112:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:7080506-7080596:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:7081052-7081203:1:exon

LOC119425294
type: Gene
subclass of: SO_0000704
RO_0002162: 451745
gene: LOC119425294
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(7084486..7091236)
location: region:7084486-7091236:-1
so has part: feature:7084486-7091236:-1:exon
subclass of: SO_0000010

119425294
type: Gene
SIO_000068: ncbigene

position:7084486:-1
position: 7084486
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7091236:-1
position: 7091236
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7084486-7091236:-1:exon

LOC119425294
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 451745
gene: LOC119425294
product: peroxisomal membrane protein 11B-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 14 Proteins, and 97% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_037692815.1
SIO_010081: LOC119425294
subclass of: SO_0000673
so part of: LOC119425294
location: complement(join(7084486..7085085,7086072..7086273,7086349..7086464,7091011..7091236))
location: region:7084486-7091236:-1
so has part: feature:7091011-7091236:-1:exon
so has part: feature:7086349-7086464:-1:exon
so has part: feature:7086072-7086273:-1:exon
so has part: feature:7084486-7085085:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:7091011-7091236:-1:exon

position:7091011:-1
position: 7091011
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:7086349-7086464:-1:exon

position:7086349:-1
position: 7086349
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7086464:-1
position: 7086464
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:7086072-7086273:-1:exon

position:7086072:-1
position: 7086072
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7086273:-1
position: 7086273
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:7084486-7085085:-1:exon

position:7085085:-1
position: 7085085
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC119425294
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 451745
gene: LOC119425294
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: peroxisomal membrane protein 11B-like
translation: MDSWVRFSAQSQAKERGFRAAQYACMLVGSALHRTSAAPELRSKINSLEAHMSLTRKLLRLGNSVEALQAAKRTIHLSDGVLRLCLTVSHLNRAMYFACDNVLWAGKTGLVAQLDQHKWSQRSFRYYLFALILSLTRDLYELRLLLDSETRSRGTKSPPPPSDSSALLTDPLSTSSSPSAGAPPLPLARLHRRLHQVLTVLYRNPPLLLDLLKNSCDLFIPLDRLGIYPTGPGFVGTCGLVSSVLSILTIVQPWLKLKP
SIO_010081: LOC119425294
subclass of: SO_0000673
so part of: LOC119425294
location: complement(join(7084680..7085085,7086072..7086273,7086349..7086464,7091011..7091066))
location: region:7084680-7091066:-1
so has part: feature:7091011-7091066:-1:exon
so has part: feature:7086349-7086464:-1:exon
so has part: feature:7086072-7086273:-1:exon
so has part: feature:7084680-7085085:-1:exon

XP_037548743.1
type: Protein
SIO_000068: ncbiprotein

position:7084680:-1
position: 7084680
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7091066:-1
position: 7091066
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7091011-7091066:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7086349-7086464:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7086072-7086273:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7084680-7085085:-1:exon

snapin
type: Gene
subclass of: SO_0000704
RO_0002162: 451745
gene: snapin
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(7092204..7097790)
location: region:7092204-7097790:-1
so has part: feature:7092204-7097790:-1:exon
subclass of: SO_0000010

119425322
type: Gene
SIO_000068: ncbigene

position:7092204:-1
position: 7092204
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7097790:-1
position: 7097790
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7092204-7097790:-1:exon

snapin
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 451745
gene: snapin
product: SNAP associated protein
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 13 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_037692841.1
SIO_010081: snapin
subclass of: SO_0000673
so part of: snapin
location: complement(join(7092204..7092636,7093055..7093173,7093297..7093343,7097644..7097790))
location: region:7092204-7097790:-1
so has part: feature:7097644-7097790:-1:exon
so has part: feature:7093297-7093343:-1:exon
so has part: feature:7093055-7093173:-1:exon
so has part: feature:7092204-7092636:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:7097644-7097790:-1:exon

position:7097644:-1
position: 7097644
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:7093297-7093343:-1:exon

position:7093297:-1
position: 7093297
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7093343:-1
position: 7093343
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:7093055-7093173:-1:exon

position:7093055:-1
position: 7093055
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7093173:-1
position: 7093173
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:7092204-7092636:-1:exon

position:7092636:-1
position: 7092636
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

snapin
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 451745
gene: snapin
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: SNARE-associated protein Snapin
translation: MAAVSVVETSPDKDAVAEGLVDLLKPAIQQLDLHVHSVRESQVELREHLDNLATELCRINENQKVALDLDPYVKKLLNARRRVVLVNNILQNAQERLRRLNHNVAKETARRKTMLEASGVFTSRSPSKP
SIO_010081: snapin
subclass of: SO_0000673
so part of: snapin
location: complement(join(7092529..7092636,7093055..7093173,7093297..7093343,7097644..7097759))
location: region:7092529-7097759:-1
so has part: feature:7097644-7097759:-1:exon
so has part: feature:7093297-7093343:-1:exon
so has part: feature:7093055-7093173:-1:exon
so has part: feature:7092529-7092636:-1:exon

XP_037548769.1
type: Protein
SIO_000068: ncbiprotein

position:7092529:-1
position: 7092529
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7097759:-1
position: 7097759
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7097644-7097759:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7093297-7093343:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7093055-7093173:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7092529-7092636:-1:exon

chtopa
type: Gene
subclass of: SO_0000704
RO_0002162: 451745
gene: chtopa
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 7102328..7119411
location: region:7102328-7119411:1
so has part: feature:7102328-7119411:1:exon
subclass of: SO_0000010

119425975
type: Gene
SIO_000068: ncbigene

position:7102328:1
position: 7102328
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7119411:1
position: 7119411
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7102328-7119411:1:exon

chtopa
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 451745
gene: chtopa
product: chromatin target of PRMT1a
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_037693535.1
SIO_010081: chtopa
subclass of: SO_0000673
so part of: chtopa
location: join(7102328..7102564,7107147..7107234,7108289..7108439,7117959..7118124,7118503..7118655,7118743..7119411)
location: region:7102328-7119411:1
so has part: feature:7102328-7102564:1:exon
so has part: feature:7107147-7107234:1:exon
so has part: feature:7108289-7108439:1:exon
so has part: feature:7117959-7118124:1:exon
so has part: feature:7118503-7118655:1:exon
so has part: feature:7118743-7119411:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:7102328-7102564:1:exon

position:7102564:1
position: 7102564
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:7107147-7107234:1:exon

position:7107147:1
position: 7107147
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7107234:1
position: 7107234
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:7108289-7108439:1:exon

position:7108289:1
position: 7108289
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7108439:1
position: 7108439
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:7117959-7118124:1:exon

position:7117959:1
position: 7117959
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7118124:1
position: 7118124
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:7118503-7118655:1:exon

position:7118503:1
position: 7118503
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7118655:1
position: 7118655
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:7118743-7119411:1:exon

position:7118743:1
position: 7118743
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

chtopa
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 451745
gene: chtopa
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: chromatin target of PRMT1a
translation: MSAASSQKVVLKSTTKVSLNERFTNMLKNKQPTAVSIRATMQQQHLASARNRRLAQQMENRPSVQAALNHKQSLKQRLGKSSIQARLGRPVGALLRGGPAGARGGMRGMTRGGFRGGIVRGALSSLRGRRMPTGGLMRGRGFAGRLPMRRGGRFRGGPAGRGGPMSRGGGRGGIPRGRGRGGLRGRGGFAGRGGRGRGRGRSVGRPAVTREQLDNQLDAYMSKTKGHLDAELDAYMAQADPDSME
SIO_010081: chtopa
subclass of: SO_0000673
so part of: chtopa
location: join(7107170..7107234,7108289..7108439,7117959..7118124,7118503..7118655,7118743..7118945)
location: region:7107170-7118945:1
so has part: feature:7107170-7107234:1:exon
so has part: feature:7108289-7108439:1:exon
so has part: feature:7117959-7118124:1:exon
so has part: feature:7118503-7118655:1:exon
so has part: feature:7118743-7118945:1:exon

XP_037549463.1
type: Protein
SIO_000068: ncbiprotein

position:7107170:1
position: 7107170
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7118945:1
position: 7118945
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7107170-7107234:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7108289-7108439:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7117959-7118124:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7118503-7118655:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:7118743-7118945:1:exon

txnipa
type: Gene
subclass of: SO_0000704
RO_0002162: 451745
gene: txnipa
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 7134994..7138240
location: region:7134994-7138240:1
so has part: feature:7134994-7138240:1:exon
subclass of: SO_0000010

119425814
type: Gene
SIO_000068: ncbigene

position:7134994:1
position: 7134994
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7138240:1
position: 7138240
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7134994-7138240:1:exon

txnipa
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 451745
gene: txnipa
product: thioredoxin interacting protein a
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 23 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_037693362.1
SIO_010081: txnipa
subclass of: SO_0000673
so part of: txnipa
location: join(7134994..7135352,7135432..7135507,7135584..7135731,7136653..7137012,7137093..7137392,7137468..7138240)
location: region:7134994-7138240:1
so has part: feature:7134994-7135352:1:exon
so has part: feature:7135432-7135507:1:exon
so has part: feature:7135584-7135731:1:exon
so has part: feature:7136653-7137012:1:exon
so has part: feature:7137093-7137392:1:exon
so has part: feature:7137468-7138240:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:7134994-7135352:1:exon

position:7135352:1
position: 7135352
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:7135432-7135507:1:exon

position:7135432:1
position: 7135432
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7135507:1
position: 7135507
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:7135584-7135731:1:exon

position:7135584:1
position: 7135584
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7135731:1
position: 7135731
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:7136653-7137012:1:exon

position:7136653:1
position: 7136653
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7137012:1
position: 7137012
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:7137093-7137392:1:exon

position:7137093:1
position: 7137093
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7137392:1
position: 7137392
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:7137468-7138240:1:exon

position:7137468:1
position: 7137468
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

txnipa
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 451745
gene: txnipa
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: thioredoxin interacting protein a
translation: MVAMTKKVKTFQVVLSDPCKSFYCGGERVCGRVEVEVTEALRVSAVKILALGRAKVEYAKGKQRCRQEAEYLRHEEVLKLSEQPTDTDGSVLLRPGNKYEYSFGFDLPQQGQLVSSYKGKFGYVQYFVKAMLERLQQPTMECRKSFEVEEPLDVNTPDLLSPTGGMKEKKVTCMFIPDGQVSLNAKIDRRGFCEGEDICINAKFENTCSRIVIPKAAIIAKQTYQANGRTKVFRQKLSSVRGNHIISGMCDAWQGKTIRVPKLKPSMLGCNMIRVEYALMIYVHIPGSEKLILELPLVIGTAGLGSRSSSVSSYDGSVSTASQSWVSLRMPSNPPSYCDITKDVRLDQPLTPLLDDVDCDSPIFMDAPGFQFPQPPAYTETDGECNANTRMLPVC
SIO_010081: txnipa
subclass of: SO_0000673
so part of: txnipa
location: join(7135097..7135352,7135432..7135507,7135584..7135731,7136653..7137012,7137093..7137392,7137468..7137515)
location: region:7135097-7137515:1
so has part: feature:7135097-7135352:1:exon
so has part: feature:7135432-7135507:1:exon
so has part: feature:7135584-7135731:1:exon
so has part: feature:7136653-7137012:1:exon
so has part: feature:7137093-7137392:1:exon
so has part: feature:7137468-7137515:1:exon

XP_037549290.1
type: Protein
SIO_000068: ncbiprotein

position:7135097:1
position: 7135097
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7137515:1
position: 7137515
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7135097-7135352:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7135432-7135507:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7135584-7135731:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7136653-7137012:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:7137093-7137392:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:7137468-7137515:1:exon

gatad2b
type: Gene
subclass of: SO_0000704
RO_0002162: 451745
gene: gatad2b
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(7180092..7222450)
location: region:7180092-7222450:-1
so has part: feature:7180092-7222450:-1:exon
subclass of: SO_0000010

119426042
type: Gene
SIO_000068: ncbigene

position:7180092:-1
position: 7180092
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7222450:-1
position: 7222450
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7180092-7222450:-1:exon

gatad2b
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 451745
gene: gatad2b
product: GATA zinc finger domain containing 2B
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 97% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_037693600.1
SIO_010081: gatad2b
subclass of: SO_0000673
so part of: gatad2b
location: complement(join(7180092..7182190,7183543..7183735,7183942..7184052,7185858..7186060,7186144..7186510,7189317..7189448,7191909..7192038,7197816..7198196,7222347..7222450))
location: region:7180092-7222450:-1
so has part: feature:7222347-7222450:-1:exon
so has part: feature:7197816-7198196:-1:exon
so has part: feature:7191909-7192038:-1:exon
so has part: feature:7189317-7189448:-1:exon
so has part: feature:7186144-7186510:-1:exon
so has part: feature:7185858-7186060:-1:exon
so has part: feature:7183942-7184052:-1:exon
so has part: feature:7183543-7183735:-1:exon
so has part: feature:7180092-7182190:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:7222347-7222450:-1:exon

position:7222347:-1
position: 7222347
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:7197816-7198196:-1:exon

position:7197816:-1
position: 7197816
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7198196:-1
position: 7198196
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:7191909-7192038:-1:exon

position:7191909:-1
position: 7191909
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7192038:-1
position: 7192038
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:7189317-7189448:-1:exon

position:7189317:-1
position: 7189317
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7189448:-1
position: 7189448
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:7186144-7186510:-1:exon

position:7186144:-1
position: 7186144
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7186510:-1
position: 7186510
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:7185858-7186060:-1:exon

position:7185858:-1
position: 7185858
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7186060:-1
position: 7186060
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:7183942-7184052:-1:exon

position:7183942:-1
position: 7183942
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7184052:-1
position: 7184052
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:7183543-7183735:-1:exon

position:7183543:-1
position: 7183543
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7183735:-1
position: 7183735
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:7180092-7182190:-1:exon

position:7182190:-1
position: 7182190
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

gatad2b
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 451745
gene: gatad2b
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transcriptional repressor p66-beta
translation: MERMSDDALRLNLLKRGLESPSEREEALSKRLKMEGHEAMERLKMLALLKRKDLADLAALEVPGTLGDGKGPGASSLHHQSLMGAAYEEKLNGSLRLGGHSGHVGQSKNGKENIMDEPVDMSAGRRCEAERARQTPSPDIIILSDNEASSPRTTPRPDERVQQANLDMFKGKTGEERQQMIKALREELRLEEARLVLLKKLRQSQMQKENMVQKASQQVAASQRSGSSAMYMNLAHMQAAAVGAGGVAGGLSGASSVSPSTLSGSAGGAVGSMADQASSQAAAKLALRKQLEKTLLEIPPPKPPAPLLHFLPSAANSEFIYMVGLEEVVQSVLDSQGKLRGTLSRMEPFFCAQCQTDFTPHWKQEKSGRILCEQCMTSNQKKALKAEHTNRLKNAFVKALQQEQEIEQRLQQQAALSPSSAPTGSNVSKTDSMIRQHALRQTPQPQASLQRGLSNSARGVLSNFAQASQLSVASSLMGMSGAKHCGSGGGNRLQHDSRRQIYNIPGLNIAYLNPAAVGAHKTSSLADRQREYLLDMIPPRSISQSITGQK
SIO_010081: gatad2b
subclass of: SO_0000673
so part of: gatad2b
location: complement(join(7182054..7182190,7183543..7183735,7183942..7184052,7185858..7186060,7186144..7186510,7189317..7189448,7191909..7192038,7197816..7198195))
location: region:7182054-7198195:-1
so has part: feature:7197816-7198195:-1:exon
so has part: feature:7191909-7192038:-1:exon
so has part: feature:7189317-7189448:-1:exon
so has part: feature:7186144-7186510:-1:exon
so has part: feature:7185858-7186060:-1:exon
so has part: feature:7183942-7184052:-1:exon
so has part: feature:7183543-7183735:-1:exon
so has part: feature:7182054-7182190:-1:exon

XP_037549528.1
type: Protein
SIO_000068: ncbiprotein

position:7182054:-1
position: 7182054
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7198195:-1
position: 7198195
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7197816-7198195:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7191909-7192038:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7189317-7189448:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7186144-7186510:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:7185858-7186060:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:7183942-7184052:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:7183543-7183735:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:7182054-7182190:-1:exon

polr1h
type: Gene
subclass of: SO_0000704
RO_0002162: 451745
gene: polr1h
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(7229198..7235375)
location: region:7229198-7235375:-1
so has part: feature:7229198-7235375:-1:exon
subclass of: SO_0000010

119426043
type: Gene
SIO_000068: ncbigene

position:7229198:-1
position: 7229198
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7235375:-1
position: 7235375
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7229198-7235375:-1:exon

polr1h
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 451745
gene: polr1h
product: RNA polymerase I subunit H
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 78% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_037693602.1
SIO_010081: polr1h
subclass of: SO_0000673
so part of: polr1h
location: complement(join(7229198..7229458,7229531..7229640,7231768..7231924,7235296..7235375))
location: region:7229198-7235375:-1
so has part: feature:7235296-7235375:-1:exon
so has part: feature:7231768-7231924:-1:exon
so has part: feature:7229531-7229640:-1:exon
so has part: feature:7229198-7229458:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:7235296-7235375:-1:exon

position:7235296:-1
position: 7235296
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:7231768-7231924:-1:exon

position:7231768:-1
position: 7231768
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7231924:-1
position: 7231924
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:7229531-7229640:-1:exon

position:7229531:-1
position: 7229531
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7229640:-1
position: 7229640
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:7229198-7229458:-1:exon

position:7229458:-1
position: 7229458
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

polr1h
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 451745
gene: polr1h
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: DNA-directed RNA polymerase I subunit RPA12
translation: MIRWQFNEAVTSNYKKVKGPDCFLKMMGLGDFLTLLFSSISLELEFSGREIRSAVVFNPAEDTSLAHEEDEGSELKGPVIDRRCSRCNKEGMIYHTRQMRSADEGQTVFFTCVHCRFQEKEDS
SIO_010081: polr1h
subclass of: SO_0000673
so part of: polr1h
location: complement(join(7229434..7229458,7229531..7229640,7231768..7231924,7235296..7235375))
location: region:7229434-7235375:-1
so has part: feature:7235296-7235375:-1:exon
so has part: feature:7231768-7231924:-1:exon
so has part: feature:7229531-7229640:-1:exon
so has part: feature:7229434-7229458:-1:exon

XP_037549530.1
type: Protein
SIO_000068: ncbiprotein

position:7229434:-1
position: 7229434
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7235296-7235375:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7231768-7231924:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7229531-7229640:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7229434-7229458:-1:exon

mgat1b
type: Gene
subclass of: SO_0000704
RO_0002162: 451745
gene: mgat1b
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(7249164..7257949)
location: region:7249164-7257949:-1
so has part: feature:7249164-7257949:-1:exon
subclass of: SO_0000010

119426141
type: Gene
SIO_000068: ncbigene

position:7249164:-1
position: 7249164
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7257949:-1
position: 7257949
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7249164-7257949:-1:exon

mgat1b
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 451745
gene: mgat1b
product: alpha-1,3-mannosyl-glycoprotein 2-beta-N-acetylglucosaminyltransferase b
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 Proteins, and 92% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_037693704.1
SIO_010081: mgat1b
subclass of: SO_0000673
so part of: mgat1b
location: complement(join(7249164..7250808,7252883..7253965,7257741..7257949))
location: region:7249164-7257949:-1
so has part: feature:7257741-7257949:-1:exon
so has part: feature:7252883-7253965:-1:exon
so has part: feature:7249164-7250808:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:7257741-7257949:-1:exon

position:7257741:-1
position: 7257741
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:7252883-7253965:-1:exon

position:7252883:-1
position: 7252883
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7253965:-1
position: 7253965
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:7249164-7250808:-1:exon

position:7250808:-1
position: 7250808
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

mgat1b
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 451745
gene: mgat1b
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: alpha-1,3-mannosyl-glycoprotein 2-beta-N-acetylglucosaminyltransferase b
translation: MVRTKGSIILCGAFLFVAWNALLLLYLWGRPPIGRLGEGGGAEPGGKEEWGIGMERAGRVNLAEEMIRLAEEVEVQLDTQKKLLKQIESHRSAWAQQESVGKRDMDSVKEVVVRPQLLKTPDFLLNDLNIGPDTDAKHSQRADWTAAPSSHPKNSQEQLQNAEVTSPAPSPEPVIPILVIACDRVTVKRSLDRLIQYRPSAELYPIIVSQDCGHAETARVIGSYGDQVMHISQPDLSDIRVRPEHRKFQGYYKIARHYRWALSQVFTTLSQSTVVVVEDDLEVAPDFFEYFRALYPILRSDPTLWCVSAWNDNGRDALVDASKVDLLHRTDFFPGLGWMLLKELWEELEPKWPSAFWDDWMRQPEQRRNRSCIRPEISRTITFGRKGVSLGQFFDQYLRYIKLNTEFVPFTNRDLSYLLRENYDETFIKDIYSAPLVKIEDLQQGGRLRGPGPYRVKYSSRDSFKAFARNLGVMDDLKSGVPRTGYRGVVSFQHRGRRVFLAPPEGWTHYDISWS
SIO_010081: mgat1b
subclass of: SO_0000673
so part of: mgat1b
location: complement(join(7250107..7250808,7252883..7253728))
location: region:7250107-7253728:-1
so has part: feature:7252883-7253728:-1:exon
so has part: feature:7250107-7250808:-1:exon

XP_037549632.1
type: Protein
SIO_000068: ncbiprotein

position:7250107:-1
position: 7250107
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7253728:-1
position: 7253728
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7252883-7253728:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7250107-7250808:-1:exon

vars2
type: Gene
subclass of: SO_0000704
RO_0002162: 451745
gene: vars2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(7263918..7321679)
location: region:7263918-7321679:-1
so has part: feature:7263918-7321679:-1:exon
subclass of: SO_0000010

119426044
type: Gene
SIO_000068: ncbigene

position:7263918:-1
position: 7263918
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7321679:-1
position: 7321679
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7263918-7321679:-1:exon

vars2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 451745
gene: vars2
product: valyl-tRNA synthetase 2, mitochondrial
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 12 Proteins, and 64% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_037693603.1
SIO_010081: vars2
subclass of: SO_0000673
so part of: vars2
location: complement(join(7263918..7264190,7270488..7270637,7272814..7273016,7273134..7273245,7274176..7274436,7276256..7276408,7277691..7277821,7278288..7278339,7283721..7283825,7283895..7284020,7284105..7284175,7293680..7293773,7297350..7297437,7297538..7297614,7297811..7297892,7300457..7300560,7301575..7301702,7301831..7301921,7305752..7305840,7305929..7306037,7306598..7306717,7308800..7308881,7308976..7309073,7312037..7312103,7312201..7312322,7317479..7317579,7317669..7317750,7321491..7321679))
location: region:7263918-7321679:-1
so has part: feature:7321491-7321679:-1:exon
so has part: feature:7317669-7317750:-1:exon
so has part: feature:7317479-7317579:-1:exon
so has part: feature:7312201-7312322:-1:exon
so has part: feature:7312037-7312103:-1:exon
so has part: feature:7308976-7309073:-1:exon
so has part: feature:7308800-7308881:-1:exon
so has part: feature:7306598-7306717:-1:exon
so has part: feature:7305929-7306037:-1:exon
so has part: feature:7305752-7305840:-1:exon
so has part: feature:7301831-7301921:-1:exon
so has part: feature:7301575-7301702:-1:exon
so has part: feature:7300457-7300560:-1:exon
so has part: feature:7297811-7297892:-1:exon
so has part: feature:7297538-7297614:-1:exon
so has part: feature:7297350-7297437:-1:exon
so has part: feature:7293680-7293773:-1:exon
so has part: feature:7284105-7284175:-1:exon
so has part: feature:7283895-7284020:-1:exon
so has part: feature:7283721-7283825:-1:exon
so has part: feature:7278288-7278339:-1:exon
so has part: feature:7277691-7277821:-1:exon
so has part: feature:7276256-7276408:-1:exon
so has part: feature:7274176-7274436:-1:exon
so has part: feature:7273134-7273245:-1:exon
so has part: feature:7272814-7273016:-1:exon
so has part: feature:7270488-7270637:-1:exon
so has part: feature:7263918-7264190:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:7321491-7321679:-1:exon

position:7321491:-1
position: 7321491
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:7317669-7317750:-1:exon

position:7317669:-1
position: 7317669
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7317750:-1
position: 7317750
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:7317479-7317579:-1:exon

position:7317479:-1
position: 7317479
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7317579:-1
position: 7317579
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:7312201-7312322:-1:exon

position:7312201:-1
position: 7312201
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7312322:-1
position: 7312322
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:7312037-7312103:-1:exon

position:7312037:-1
position: 7312037
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7312103:-1
position: 7312103
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:7308976-7309073:-1:exon

position:7308976:-1
position: 7308976
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7309073:-1
position: 7309073
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:7308800-7308881:-1:exon

position:7308800:-1
position: 7308800
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7308881:-1
position: 7308881
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:7306598-7306717:-1:exon

position:7306598:-1
position: 7306598
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7306717:-1
position: 7306717
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:7305929-7306037:-1:exon

position:7305929:-1
position: 7305929
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7306037:-1
position: 7306037
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:7305752-7305840:-1:exon

position:7305752:-1
position: 7305752
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7305840:-1
position: 7305840
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:7301831-7301921:-1:exon

position:7301831:-1
position: 7301831
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7301921:-1
position: 7301921
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:7301575-7301702:-1:exon

position:7301575:-1
position: 7301575
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7301702:-1
position: 7301702
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:7300457-7300560:-1:exon

position:7300457:-1
position: 7300457
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7300560:-1
position: 7300560
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:7297811-7297892:-1:exon

position:7297811:-1
position: 7297811
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7297892:-1
position: 7297892
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:7297538-7297614:-1:exon

position:7297538:-1
position: 7297538
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7297614:-1
position: 7297614
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:7297350-7297437:-1:exon

position:7297350:-1
position: 7297350
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7297437:-1
position: 7297437
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:7293680-7293773:-1:exon

position:7293680:-1
position: 7293680
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7293773:-1
position: 7293773
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:7284105-7284175:-1:exon

position:7284105:-1
position: 7284105
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7284175:-1
position: 7284175
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:7283895-7284020:-1:exon

position:7283895:-1
position: 7283895
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7284020:-1
position: 7284020
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:7283721-7283825:-1:exon

position:7283721:-1
position: 7283721
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7283825:-1
position: 7283825
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:7278288-7278339:-1:exon

position:7278288:-1
position: 7278288
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7278339:-1
position: 7278339
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:7277691-7277821:-1:exon

position:7277691:-1
position: 7277691
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7277821:-1
position: 7277821
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:7276256-7276408:-1:exon

position:7276256:-1
position: 7276256
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7276408:-1
position: 7276408
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:7274176-7274436:-1:exon

position:7274176:-1
position: 7274176
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7274436:-1
position: 7274436
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:7273134-7273245:-1:exon

position:7273134:-1
position: 7273134
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7273245:-1
position: 7273245
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 26
SIO_000628: feature:7272814-7273016:-1:exon

position:7272814:-1
position: 7272814
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7273016:-1
position: 7273016
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 27
SIO_000628: feature:7270488-7270637:-1:exon

position:7270488:-1
position: 7270488
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7270637:-1
position: 7270637
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 28
SIO_000628: feature:7263918-7264190:-1:exon

position:7264190:-1
position: 7264190
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

vars2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 451745
gene: vars2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: valine--tRNA ligase, mitochondrial
translation: MWRAGYSQSLRVPKEIAARLCSNKPPGPPSPVSSQLTSSPRPKAEKQRRKREREKAIQSKQQDSVEDQTLNWSEKPKIVYSAHTPPGMKKDTTLPFPSSYSPEYVESCWYQWWEKEGFFSPEIHERLSHRVDRTFSLCIPPPNVTGTLHVGHALTVAVQDALVRWKRMQGYRVLWVPGCDHAGIATQTVVERRLLRGTGKRRQDFTRQEFLQEVWKWKNEKGEEIYHQLRRLGASLDWSRACFTMDPAFSRAVTAAFVRLCDSGLIYRSEGLVNWSCALQSAISDIEVDSVELPGRTMMSVPGYEDQVEFGTMYTFAYPVEGHDGRVAVSTTRPETILGDVAVVVHPDDPRYQTFHGRQCRHPFSNRLIPVITDALVDMDLGTGAMKVTPAHDHTDLLLSRKHSLPHICVIGGDGTMTPSCGQWLEGKKRFDARQLVLDALAEKKLFLGKQNHPMTLPVCSRSGDIIEPLLKKQWFVSCDKMAAKAIQAVEEGQLEIIPQHYTKTWKNWMSSISDWCVSRQLWWGHRIPAYQVQLPDATADPEERWVWGQSVEEARQKAAVKYGVKPEDITLKQDPDVLDTWFSSGLFPFAMLGWPEQTSDLQRFYPNSVLETGSDLIFFWVARMVMLGTELTGQLPFKQVLLHSLVRDKYGRKMSKSLGNVIDPLDMIHGVSLQVSLGAQLHSLLGWTAAERDISLSVSQVLSFRHFCNKMWQTLRFTLGVLGDENAPPLGTIEETIPVGSMERWICSRLYSTVLQCEQAFEAYELQVVTSALHSFWVHSLCDVYIEYVKPVLLRKDAGAEVQADTDYSDASRQVTRTVLYHCVSLSLSLLSPFMPFITEELWQRLQPLRPGPPGALTQTSLCLQPYPRSTHLAHWFFPEEEKDFLMVQEVIRVARSLQAQWGLIKEKPVMWAVCSPSQAQALLHFRSAVWTLGRISSLHLYCPDSPDWLPSVQSTPPPKDCVIGVVDHTCQLHLYSQGGVNVEKQILQLSQRRDKLVPKLEKILRRLQGSDVVDSVPVQNKQQIETQVSALKQELKIIEDQLKVLKGTRSTG
SIO_010081: vars2
subclass of: SO_0000673
so part of: vars2
location: complement(join(7264113..7264190,7270488..7270637,7272814..7273016,7273134..7273245,7274176..7274436,7276256..7276408,7277691..7277821,7278288..7278339,7283721..7283825,7283895..7284020,7284105..7284175,7293680..7293773,7297350..7297437,7297538..7297614,7297811..7297892,7300457..7300560,7301575..7301702,7301831..7301921,7305752..7305840,7305929..7306037,7306598..7306717,7308800..7308881,7308976..7309073,7312037..7312103,7312201..7312322,7317479..7317579,7317669..7317750,7321491..7321679))
location: region:7264113-7321679:-1
so has part: feature:7321491-7321679:-1:exon
so has part: feature:7317669-7317750:-1:exon
so has part: feature:7317479-7317579:-1:exon
so has part: feature:7312201-7312322:-1:exon
so has part: feature:7312037-7312103:-1:exon
so has part: feature:7308976-7309073:-1:exon
so has part: feature:7308800-7308881:-1:exon
so has part: feature:7306598-7306717:-1:exon
so has part: feature:7305929-7306037:-1:exon
so has part: feature:7305752-7305840:-1:exon
so has part: feature:7301831-7301921:-1:exon
so has part: feature:7301575-7301702:-1:exon
so has part: feature:7300457-7300560:-1:exon
so has part: feature:7297811-7297892:-1:exon
so has part: feature:7297538-7297614:-1:exon
so has part: feature:7297350-7297437:-1:exon
so has part: feature:7293680-7293773:-1:exon
so has part: feature:7284105-7284175:-1:exon
so has part: feature:7283895-7284020:-1:exon
so has part: feature:7283721-7283825:-1:exon
so has part: feature:7278288-7278339:-1:exon
so has part: feature:7277691-7277821:-1:exon
so has part: feature:7276256-7276408:-1:exon
so has part: feature:7274176-7274436:-1:exon
so has part: feature:7273134-7273245:-1:exon
so has part: feature:7272814-7273016:-1:exon
so has part: feature:7270488-7270637:-1:exon
so has part: feature:7264113-7264190:-1:exon

XP_037549531.1
type: Protein
SIO_000068: ncbiprotein

position:7264113:-1
position: 7264113
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7321491-7321679:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7317669-7317750:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7317479-7317579:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7312201-7312322:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:7312037-7312103:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:7308976-7309073:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:7308800-7308881:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:7306598-7306717:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:7305929-7306037:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:7305752-7305840:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:7301831-7301921:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:7301575-7301702:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:7300457-7300560:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:7297811-7297892:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:7297538-7297614:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:7297350-7297437:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:7293680-7293773:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:7284105-7284175:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:7283895-7284020:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:7283721-7283825:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:7278288-7278339:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:7277691-7277821:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:7276256-7276408:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:7274176-7274436:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:7273134-7273245:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:7272814-7273016:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:7270488-7270637:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:7264113-7264190:-1:exon

ppp1r11
type: Gene
subclass of: SO_0000704
RO_0002162: 451745
gene: ppp1r11
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 7322288..7331278
location: region:7322288-7331278:1
so has part: feature:7322288-7331278:1:exon
subclass of: SO_0000010

119425886
type: Gene
SIO_000068: ncbigene

position:7322288:1
position: 7322288
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7331278:1
position: 7331278
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7322288-7331278:1:exon

ppp1r11
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 451745
gene: ppp1r11
product: protein phosphatase 1, regulatory (inhibitor) subunit 11, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_037693441.1
SIO_010081: ppp1r11
subclass of: SO_0000673
so part of: ppp1r11
location: join(7322288..7322585,7328449..7328557,7329355..7331278)
location: region:7322288-7331278:1
so has part: feature:7322288-7322585:1:exon
so has part: feature:7328449-7328557:1:exon
so has part: feature:7329355-7331278:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:7322288-7322585:1:exon

position:7322585:1
position: 7322585
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:7328449-7328557:1:exon

position:7328449:1
position: 7328449
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7328557:1
position: 7328557
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:7329355-7331278:1:exon

position:7329355:1
position: 7329355
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

ppp1r11
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 451745
gene: ppp1r11
product: protein phosphatase 1, regulatory (inhibitor) subunit 11, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_037693443.1
SIO_010081: ppp1r11
subclass of: SO_0000673
so part of: ppp1r11
location: join(7322288..7322585,7328449..7328557,7329355..7329564,7329777..7331278)
location: region:7322288-7331278:1
so has part: feature:7322288-7322585:1:exon
so has part: feature:7328449-7328557:1:exon
so has part: feature:7329355-7329564:1:exon
so has part: feature:7329777-7331278:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:7322288-7322585:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7328449-7328557:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7329355-7329564:1:exon

position:7329564:1
position: 7329564
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:7329777-7331278:1:exon

position:7329777:1
position: 7329777
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

ppp1r11
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 451745
gene: ppp1r11
product: protein phosphatase 1, regulatory (inhibitor) subunit 11, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_037693442.1
SIO_010081: ppp1r11
subclass of: SO_0000673
so part of: ppp1r11
location: join(7322288..7322380,7322475..7322585,7328449..7328557,7329355..7331278)
location: region:7322288-7331278:1
so has part: feature:7322288-7322380:1:exon
so has part: feature:7322475-7322585:1:exon
so has part: feature:7328449-7328557:1:exon
so has part: feature:7329355-7331278:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:7322288-7322380:1:exon

position:7322380:1
position: 7322380
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:7322475-7322585:1:exon

position:7322475:1
position: 7322475
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:7328449-7328557:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7329355-7331278:1:exon

ppp1r11
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 451745
gene: ppp1r11
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: E3 ubiquitin-protein ligase PPP1R11
translation: MAEVPGTSSETITETVQTSTPPPPQQEGRSLTIKLRKRKTEKKVEWSSDTVDNEHLGRRSSKCCCLYEKPRPFGESSSESEGDDDDEGCGSANCILGHGRRGHGQRPEGGTAAPSNSGGAH
SIO_010081: ppp1r11
subclass of: SO_0000673
so part of: ppp1r11
location: join(7322508..7322585,7328449..7328557,7329355..7329533)
location: region:7322508-7329533:1
so has part: feature:7322508-7322585:1:exon
so has part: feature:7328449-7328557:1:exon
so has part: feature:7329355-7329533:1:exon

XP_037549369.1
type: Protein
SIO_000068: ncbiprotein

position:7322508:1
position: 7322508
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7329533:1
position: 7329533
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7322508-7322585:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7328449-7328557:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7329355-7329533:1:exon

ppp1r11
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 451745
gene: ppp1r11
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: E3 ubiquitin-protein ligase PPP1R11
translation: MAEVPGTSSETITETVQTSTPPPPQQEGRSLTIKLRKRKTEKKVEWSSDTVDNEHLGRRSSKCCCLYEKPRPFGESSSESEGDDDDEGCGSANCILGHGRRGHGQRPEGGTAAPSNSGGAH
SIO_010081: ppp1r11
subclass of: SO_0000673
so part of: ppp1r11
location: join(7322508..7322585,7328449..7328557,7329355..7329533)
location: region:7322508-7329533:1
so has part: feature:7322508-7322585:1:exon
so has part: feature:7328449-7328557:1:exon
so has part: feature:7329355-7329533:1:exon

XP_037549370.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:7322508-7322585:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7328449-7328557:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7329355-7329533:1:exon

ppp1r11
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 451745
gene: ppp1r11
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: E3 ubiquitin-protein ligase PPP1R11
translation: MAEVPGTSSETITETVQTSTPPPPQQEGRSLTIKLRKRKTEKKVEWSSDTVDNEHLGRRSSKCCCLYEKPRPFGESSSESEGDDDDEGCGSANCILGHGRRGHGQRPEGGTAAPSNSGGAH
SIO_010081: ppp1r11
subclass of: SO_0000673
so part of: ppp1r11
location: join(7322508..7322585,7328449..7328557,7329355..7329533)
location: region:7322508-7329533:1
so has part: feature:7322508-7322585:1:exon
so has part: feature:7328449-7328557:1:exon
so has part: feature:7329355-7329533:1:exon

XP_037549371.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:7322508-7322585:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7328449-7328557:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7329355-7329533:1:exon

sync
type: Gene
subclass of: SO_0000704
RO_0002162: 451745
gene: sync
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(7334449..7341252)
location: region:7334449-7341252:-1
so has part: feature:7334449-7341252:-1:exon
subclass of: SO_0000010

119426045
type: Gene
SIO_000068: ncbigene

position:7334449:-1
position: 7334449
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7341252:-1
position: 7341252
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7334449-7341252:-1:exon

sync
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 451745
gene: sync
product: syncoilin, intermediate filament protein
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 49% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_037693604.1
SIO_010081: sync
subclass of: SO_0000673
so part of: sync
location: complement(join(7334449..7334464,7334865..7334989,7335068..7335275,7339611..7339825,7339906..7341252))
location: region:7334449-7341252:-1
so has part: feature:7339906-7341252:-1:exon
so has part: feature:7339611-7339825:-1:exon
so has part: feature:7335068-7335275:-1:exon
so has part: feature:7334865-7334989:-1:exon
so has part: feature:7334449-7334464:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:7339906-7341252:-1:exon

position:7339906:-1
position: 7339906
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:7339611-7339825:-1:exon

position:7339611:-1
position: 7339611
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7339825:-1
position: 7339825
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:7335068-7335275:-1:exon

position:7335068:-1
position: 7335068
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7335275:-1
position: 7335275
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:7334865-7334989:-1:exon

position:7334865:-1
position: 7334865
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7334989:-1
position: 7334989
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:7334449-7334464:-1:exon

position:7334464:-1
position: 7334464
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

sync
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 451745
gene: sync
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: syncoilin
translation: MSSTGFKQLLIREERDTERTIAEPREGHENPSGLSFTGSTLQHSASMKPYLQEMDELLKGCEELTGIPFSSCSSVGNSETSTSELSCNRNKEEIRMESYGCAYSSTRYIDTRTDGIETEGETKGQSLVNHINRCTVGQRTEMPLSSAGNKLRANMLEYEDQLMGMLNMLESCMEESGMDFEPEDKGQEYVHISKIPYHVKGTTPVSFNPLELETQPVLPELCSHGGNVSDESRACSEKTSDPSGKRPEKPEEQGHLRTDQGSGLQADDTEQDPAFSEEIKSGRTFEERDADDKELPTEKERDFSTDLGSDTDELRALGSRMEDCMEEVQQLQNKRKQLLVEVLQLRGERTEEEEQTAEWINSRVVSLMNVLQREEEVRRGVRKRDVYCLREERAEEEKKLWKVNLERQGLQEDIRRLRRRLFAVARDWTYSQAALNSQRGEVELLKREEEALDSLMLQLTAESGQFRSAHQQQLLGLQAKLHTRSCGRTSSTQEELSECRRQSCSNIQQYLQEEQKALEDRYGPMLVALLKRREATAGALVKTKQHAQELRAQLRPLREEVHKLELKRACLDEKLQLIVLQRREHVGRYKVEVFHLEERSRELKTELEVQKRKNKEMEELRESLTRQLLLHRWGTK
SIO_010081: sync
subclass of: SO_0000673
so part of: sync
location: complement(join(7334449..7334464,7334865..7334989,7335068..7335275,7339611..7339825,7339906..7341252))
location: region:7334449-7341252:-1
so has part: feature:7339906-7341252:-1:exon
so has part: feature:7339611-7339825:-1:exon
so has part: feature:7335068-7335275:-1:exon
so has part: feature:7334865-7334989:-1:exon
so has part: feature:7334449-7334464:-1:exon

XP_037549532.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:7339906-7341252:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7339611-7339825:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7335068-7335275:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7334865-7334989:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:7334449-7334464:-1:exon

LOC119425658
type: Gene
subclass of: SO_0000704
RO_0002162: 451745
gene: LOC119425658
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(<7374608..7375491)
location: region:7374608-7375491:-1
so has part: feature:7374608-7375491:-1:exon
subclass of: SO_0000010

119425658
type: Gene
SIO_000068: ncbigene

position:7374608:-1
position: 7374608
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

position:7375491:-1
position: 7375491
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7374608-7375491:-1:exon

LOC119425658
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 451745
gene: LOC119425658
product: NHS-like protein 1
inference: similar to RNA sequence (same species):INSD:GELZ01002742.1
exception: annotated by transcript or proteomic data
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: added 215 bases not found in genome assembly; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 94% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_037693193.1
SIO_010081: LOC119425658
subclass of: SO_0000673
so part of: LOC119425658
location: complement(join(<7374608..7375038,7375414..7375491))
location: region:7374608-7375491:-1
so has part: feature:7375414-7375491:-1:exon
so has part: feature:7374608-7375038:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:7375414-7375491:-1:exon

position:7375414:-1
position: 7375414
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:7374608-7375038:-1:exon

position:7375038:-1
position: 7375038
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC119425658
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 451745
gene: LOC119425658
inference: similar to RNA sequence (same species):INSD:GELZ01002742.1
exception: annotated by transcript or proteomic data
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: added 215 bases not found in genome assembly; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: NHS-like protein 1
translation: MSRRRSTGDLVPSDITEILAREVRAQRGQRKSGSSLGQALSWLRGSRKKKNFGGRHRHSTSVAENKLGLQNHDASKAGPKGSEDQKRLTVHYTTSQHYQDNVFIEGSRPQYLEDLHTEAQEGLKILQQEEHKNGVNFDDHRSTSSTGT
SIO_010081: LOC119425658
subclass of: SO_0000673
so part of: LOC119425658
location: complement(<7374608..7374836)
location: region:7374608-7374836:-1
so has part: feature:7374608-7374836:-1:exon

XP_037549121.1
type: Protein
SIO_000068: ncbiprotein

position:7374836:-1
position: 7374836
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7374608-7374836:-1:exon

LOC119426046
type: Gene
subclass of: SO_0000704
RO_0002162: 451745
gene: LOC119426046
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 7387291..7422422
location: region:7387291-7422422:1
so has part: feature:7387291-7422422:1:exon
subclass of: SO_0000010

119426046
type: Gene
SIO_000068: ncbigene

position:7387291:1
position: 7387291
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7422422:1
position: 7422422
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7387291-7422422:1:exon

LOC119426046
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 451745
gene: LOC119426046
product: uncharacterized protein KIAA1522 homolog
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 Proteins, and 89% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_037693605.1
SIO_010081: LOC119426046
subclass of: SO_0000673
so part of: LOC119426046
location: join(7387291..7387438,7414055..7414114,7416631..7416789,7416896..7416939,7417041..7417179,7417991..7418098,7418175..7418338,7418417..7418590,7418722..7422076,7422242..7422422)
location: region:7387291-7422422:1
so has part: feature:7387291-7387438:1:exon
so has part: feature:7414055-7414114:1:exon
so has part: feature:7416631-7416789:1:exon
so has part: feature:7416896-7416939:1:exon
so has part: feature:7417041-7417179:1:exon
so has part: feature:7417991-7418098:1:exon
so has part: feature:7418175-7418338:1:exon
so has part: feature:7418417-7418590:1:exon
so has part: feature:7418722-7422076:1:exon
so has part: feature:7422242-7422422:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:7387291-7387438:1:exon

position:7387438:1
position: 7387438
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:7414055-7414114:1:exon

position:7414055:1
position: 7414055
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7414114:1
position: 7414114
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:7416631-7416789:1:exon

position:7416631:1
position: 7416631
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7416789:1
position: 7416789
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:7416896-7416939:1:exon

position:7416896:1
position: 7416896
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7416939:1
position: 7416939
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:7417041-7417179:1:exon

position:7417041:1
position: 7417041
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7417179:1
position: 7417179
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:7417991-7418098:1:exon

position:7417991:1
position: 7417991
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7418098:1
position: 7418098
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:7418175-7418338:1:exon

position:7418175:1
position: 7418175
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7418338:1
position: 7418338
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:7418417-7418590:1:exon

position:7418417:1
position: 7418417
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7418590:1
position: 7418590
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:7418722-7422076:1:exon

position:7418722:1
position: 7418722
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7422076:1
position: 7422076
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:7422242-7422422:1:exon

position:7422242:1
position: 7422242
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC119426046
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 451745
gene: LOC119426046
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein KIAA1522 homolog
translation: MGNSIHKKKKKEKVQVEGTVSCPPSFSSSPKRDTWSSFWLLGRPDKLKTGMVVYLRKSIHSLLSAFKKKAGPKGSEDQKRLTVHYTTSQHYQDNVFIEGSRPQYLEDLHTEAQEGLKILQQEEHKNGVNFDDHRSTSSTGTLHPEQDISSKDRVSSPESISTTGNTDITVTPATSASPVLTHQGSTFKPLNPVKKTDRSRKRNRRTTIMGIPNQVQKELALNRSSTFQPLVSTKLPDHNKHEGDGQTSVVIPTVDGGTPVANKEGARVHLSELEQVFRDEALVSKHLQDVYQKEQSHLCPTSALRPKSLAVTGIKTPFTLSPSMLSFFQEPPGPVMSISPQATYLSTIIPNAVLPASVEVIEIDRSISRTRGGSVNHGRSIRTVSKSSLTSGDSAVSPLLSRKSDGDGSQTNSSNYDITLMPKSASGSNWSESQSSKTVISDSLHTFSNKVGLDERESQTDLSGDLDLANLCNSAGVISSSSSKGENTTELGAESDTKELMTSGEQAKNKHNCAHSLSVMKTKQPPAPPRRINSLHGNKMRSDSKTVSDIKDLCNSASEKEETSKDTVAEGDTKLVTNNSTKLISFSNSTGSSPIDSSSGTLSSLQTSSYRNEEATKSSLESSTSPLQKYPPEGEKIERTMSPSSGYSSQSGTPTLSPKGIPTTSPDKQTKNPIKPERLASQASSSAASPSSSLTSLSSGTSELANADVSICTTTLSPQESSPIAATEELTPNSLPSNFKVEVRELLAIPSPPKVKAPCPPPPEAWAHNKCTVELLCGPSISKKVVYKQAQIQDSTENQEEAQTEPIKESQFADGNQKTTDKPLLEMSINTTTPMRMSVTHRQGDDGGDMKQVDRESLGTEQVQETKKANVQSREENGISGERVQEIQEATPKKDPPPVMKKPMRVLFSLDKERPVETKQNEERSAATEVQERNSTCSQDAVMIIDNSQTEKCENPYRQTLSVEVPKVSKISPPPTPPPAYQPTPPLKKKTPSSPISIPLNESPREQEESHVEDSCWPPPPPPLEGDSAFDGSEEVDFPLPPPPSVADSTMDVSDPTPAFSHPPENDSKPVVVAEVSKADIVDETSCQTVQNISSVSPPPAELSLVLPVTREKNILPVVAAVPSSSFLKRNSLKIEDPSLPALPVSAQLSAPITEQISPPPPTENVTHGLNFRRQSSGSYRDTRSKELLSRHKSSPIPKEDANIPLVTPSLLHMVRLRSVSMTEDQVKATLEDKSCNEGAPVMDNHPVSVQGSQNIPQKPIRKSLSLKSSVQTVKPSTVTIGSPSTCLQEAIRMKTAAMSSRDGLPSRMGIKSTNYSCVSQPHSQTLKSSEGCDMYKSPASTASFIFSRSTKKVVIETVAASSSETQASLKQSLAAELRQVSDQSKAGVFSNGRMKCDKVPPPVAKKPVPSSPSPSRIPPPCHSAKLELSFEGNGALGVQQMSDVAHPETTTRVTADTIETLF
SIO_010081: LOC119426046
subclass of: SO_0000673
so part of: LOC119426046
location: join(7387291..7387438,7414055..7414114,7416631..7416789,7416896..7416939,7417041..7417179,7417991..7418098,7418175..7418338,7418417..7418590,7418722..7422076,7422242..7422282)
location: region:7387291-7422282:1
so has part: feature:7387291-7387438:1:exon
so has part: feature:7414055-7414114:1:exon
so has part: feature:7416631-7416789:1:exon
so has part: feature:7416896-7416939:1:exon
so has part: feature:7417041-7417179:1:exon
so has part: feature:7417991-7418098:1:exon
so has part: feature:7418175-7418338:1:exon
so has part: feature:7418417-7418590:1:exon
so has part: feature:7418722-7422076:1:exon
so has part: feature:7422242-7422282:1:exon

XP_037549533.1
type: Protein
SIO_000068: ncbiprotein

position:7422282:1
position: 7422282
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7387291-7387438:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7414055-7414114:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7416631-7416789:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7416896-7416939:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:7417041-7417179:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:7417991-7418098:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:7418175-7418338:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:7418417-7418590:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:7418722-7422076:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:7422242-7422282:1:exon

yars1
type: Gene
subclass of: SO_0000704
RO_0002162: 451745
gene: yars1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(7426117..7432311)
location: region:7426117-7432311:-1
so has part: feature:7426117-7432311:-1:exon
subclass of: SO_0000010

119425928
type: Gene
SIO_000068: ncbigene

position:7426117:-1
position: 7426117
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7432311:-1
position: 7432311
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7426117-7432311:-1:exon

yars1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 451745
gene: yars1
product: tyrosyl-tRNA synthetase 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_037693483.1
SIO_010081: yars1
subclass of: SO_0000673
so part of: yars1
location: complement(join(7426117..7426803,7426894..7427035,7427120..7427313,7427400..7427515,7427603..7427738,7428480..7428565,7428668..7428803,7428888..7428980,7430737..7430817,7430910..7431039,7431126..7431301,7431404..7431550,7431629..7431701,7432204..7432311))
location: region:7426117-7432311:-1
so has part: feature:7432204-7432311:-1:exon
so has part: feature:7431629-7431701:-1:exon
so has part: feature:7431404-7431550:-1:exon
so has part: feature:7431126-7431301:-1:exon
so has part: feature:7430910-7431039:-1:exon
so has part: feature:7430737-7430817:-1:exon
so has part: feature:7428888-7428980:-1:exon
so has part: feature:7428668-7428803:-1:exon
so has part: feature:7428480-7428565:-1:exon
so has part: feature:7427603-7427738:-1:exon
so has part: feature:7427400-7427515:-1:exon
so has part: feature:7427120-7427313:-1:exon
so has part: feature:7426894-7427035:-1:exon
so has part: feature:7426117-7426803:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:7432204-7432311:-1:exon

position:7432204:-1
position: 7432204
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:7431629-7431701:-1:exon

position:7431629:-1
position: 7431629
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7431701:-1
position: 7431701
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:7431404-7431550:-1:exon

position:7431404:-1
position: 7431404
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7431550:-1
position: 7431550
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:7431126-7431301:-1:exon

position:7431126:-1
position: 7431126
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7431301:-1
position: 7431301
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:7430910-7431039:-1:exon

position:7430910:-1
position: 7430910
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7431039:-1
position: 7431039
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:7430737-7430817:-1:exon

position:7430737:-1
position: 7430737
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7430817:-1
position: 7430817
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:7428888-7428980:-1:exon

position:7428888:-1
position: 7428888
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7428980:-1
position: 7428980
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:7428668-7428803:-1:exon

position:7428668:-1
position: 7428668
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7428803:-1
position: 7428803
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:7428480-7428565:-1:exon

position:7428480:-1
position: 7428480
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7428565:-1
position: 7428565
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:7427603-7427738:-1:exon

position:7427603:-1
position: 7427603
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7427738:-1
position: 7427738
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:7427400-7427515:-1:exon

position:7427400:-1
position: 7427400
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7427515:-1
position: 7427515
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:7427120-7427313:-1:exon

position:7427120:-1
position: 7427120
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7427313:-1
position: 7427313
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:7426894-7427035:-1:exon

position:7426894:-1
position: 7426894
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7427035:-1
position: 7427035
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:7426117-7426803:-1:exon

position:7426803:-1
position: 7426803
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

yars1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 451745
gene: yars1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tyrosine--tRNA ligase, cytoplasmic
translation: MGEQLSPEEKFSLITRNLQEVLGEEKVKQVLQERELKVYWGTATTGKPHVAYFVPMSKIADFLRAGCEVTVLFADLHAYLDNMKAPWELLELRVKYYEQVIKAMLESIGVPLEKLRFIKGTDFQLSREYTLDVYRLSSMVTEHDAKKAGAEVVKQVEHPLLSGLLYPGLQALDEEYLKVDAQFGGVDQRKIFTLAEKYLPSLGYAKRAHLMNPMVPGLTGVKMSSSEEESKIDLLDSKEDVKKKLKKAFCEPGNIQNNGVLSFVKYVLFPLRGEFSIKRDPKWGGDRIYAVFEEVEKDFAAELIHPGDLKASVEAALNELLEPIRKKFQSPELRKLTNSAYPSSSKTKTGGKGAKAGGGGGGGGEDDELVPSRLDIRVGKVISVEKHPDADSLYLEKIDVGEPEPRTVVSGLVAYVSQEELQDRTVLLLCNLKPQKMRGIESQAMLLCASIEGEPRRVEPLDPPEGSSPGERVFVEGWESGNPDDRLNPKKKVWEKLQVDLKISDECVAQWKDRKLMTKLGQITCKTLKGGNIS
SIO_010081: yars1
subclass of: SO_0000673
so part of: yars1
location: complement(join(7426693..7426803,7426894..7427035,7427120..7427313,7427400..7427515,7427603..7427738,7428480..7428565,7428668..7428803,7428888..7428980,7430737..7430817,7430910..7431039,7431126..7431301,7431404..7431550,7431629..7431685))
location: region:7426693-7431685:-1
so has part: feature:7431629-7431685:-1:exon
so has part: feature:7431404-7431550:-1:exon
so has part: feature:7431126-7431301:-1:exon
so has part: feature:7430910-7431039:-1:exon
so has part: feature:7430737-7430817:-1:exon
so has part: feature:7428888-7428980:-1:exon
so has part: feature:7428668-7428803:-1:exon
so has part: feature:7428480-7428565:-1:exon
so has part: feature:7427603-7427738:-1:exon
so has part: feature:7427400-7427515:-1:exon
so has part: feature:7427120-7427313:-1:exon
so has part: feature:7426894-7427035:-1:exon
so has part: feature:7426693-7426803:-1:exon

XP_037549411.1
type: Protein
SIO_000068: ncbiprotein

position:7426693:-1
position: 7426693
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7431685:-1
position: 7431685
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7431629-7431685:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7431404-7431550:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7431126-7431301:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7430910-7431039:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:7430737-7430817:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:7428888-7428980:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:7428668-7428803:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:7428480-7428565:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:7427603-7427738:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:7427400-7427515:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:7427120-7427313:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:7426894-7427035:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:7426693-7426803:-1:exon

mfsd2ab
type: Gene
subclass of: SO_0000704
RO_0002162: 451745
gene: mfsd2ab
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(<7450535..7464006)
location: region:7450535-7464006:-1
so has part: feature:7450535-7464006:-1:exon
subclass of: SO_0000010

119425723
type: Gene
SIO_000068: ncbigene

position:7450535:-1
position: 7450535
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

position:7464006:-1
position: 7464006
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7450535-7464006:-1:exon

mfsd2ab
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 451745
gene: mfsd2ab
product: major facilitator superfamily domain containing 2ab
inference: similar to RNA sequence (same species):INSD:GELZ01028307.1
exception: annotated by transcript or proteomic data
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: added 598 bases not found in genome assembly; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 22 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_037693267.1
SIO_010081: mfsd2ab
subclass of: SO_0000673
so part of: mfsd2ab
location: complement(join(<7450535..7450678,7450775..7450887,7451014..7451097,7452987..7453070,7453765..7453883,7454257..7454347,7454476..7454648,7454731..7454809,7456163..7456286,7460280..7460404,7461297..7461416,7463770..7464006))
location: region:7450535-7464006:-1
so has part: feature:7463770-7464006:-1:exon
so has part: feature:7461297-7461416:-1:exon
so has part: feature:7460280-7460404:-1:exon
so has part: feature:7456163-7456286:-1:exon
so has part: feature:7454731-7454809:-1:exon
so has part: feature:7454476-7454648:-1:exon
so has part: feature:7454257-7454347:-1:exon
so has part: feature:7453765-7453883:-1:exon
so has part: feature:7452987-7453070:-1:exon
so has part: feature:7451014-7451097:-1:exon
so has part: feature:7450775-7450887:-1:exon
so has part: feature:7450535-7450678:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:7463770-7464006:-1:exon

position:7463770:-1
position: 7463770
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:7461297-7461416:-1:exon

position:7461297:-1
position: 7461297
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7461416:-1
position: 7461416
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:7460280-7460404:-1:exon

position:7460280:-1
position: 7460280
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7460404:-1
position: 7460404
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:7456163-7456286:-1:exon

position:7456163:-1
position: 7456163
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7456286:-1
position: 7456286
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:7454731-7454809:-1:exon

position:7454731:-1
position: 7454731
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7454809:-1
position: 7454809
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:7454476-7454648:-1:exon

position:7454476:-1
position: 7454476
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7454648:-1
position: 7454648
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:7454257-7454347:-1:exon

position:7454257:-1
position: 7454257
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7454347:-1
position: 7454347
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:7453765-7453883:-1:exon

position:7453765:-1
position: 7453765
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7453883:-1
position: 7453883
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:7452987-7453070:-1:exon

position:7452987:-1
position: 7452987
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7453070:-1
position: 7453070
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:7451014-7451097:-1:exon

position:7451014:-1
position: 7451014
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7451097:-1
position: 7451097
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:7450775-7450887:-1:exon

position:7450775:-1
position: 7450775
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7450887:-1
position: 7450887
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:7450535-7450678:-1:exon

position:7450678:-1
position: 7450678
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

mfsd2ab
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 451745
gene: mfsd2ab
inference: similar to RNA sequence (same species):INSD:GELZ01028307.1
exception: annotated by transcript or proteomic data
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: added 232 bases not found in genome assembly; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: sodium-dependent lysophosphatidylcholine symporter 1-B
translation: MAKGEGAEQYSNASLLNKSVSSDGFKLARKHEHRLTVCNKLCYAIGGAPYQITGCALGFFLQLYLLDVAQLDPFFASIILFAGRAWDAVTDPTVGFLVSRSPWTRIGRMLPWILFSTPLAVLSYFLIWYVPPFEHGKVIWYIFFYCLFQTLQTCFHVPYSALTMFISSEQKERDSATAYRMTVEVLGTVLGTAIQGQIVGMANAPCLPGPGEIVADTSNGSLVDHNVSDHGISLQHTRNAYMIASGVICLIYILCAIVLFFGVREQKESCQIRTEPMPFFQGIRLVVGHGPYAKLVMVFLFTSLGFMLLEGNFALFCSSTLGFRKDFQNILLVIMLSATIAVPFWQWFLTRFGKKMSVYVGSMSVIPFLILVVCVKSNLYVTYVVSFIAGVGVASAFLLPWSMLPDVLDDFKVQNPDSTGHEALFYSFYVFFTKFASGVSLGVSTLSLDFAGYISRGCSQPKEVDLTLRVLVSAAPVALILIGLGILYSYPIDEERRQYNHKMLQEMRDSEADSESETTEISNVI
SIO_010081: mfsd2ab
subclass of: SO_0000673
so part of: mfsd2ab
location: complement(join(<7450535..7450678,7450775..7450887,7451014..7451097,7452987..7453070,7453765..7453883,7454257..7454347,7454476..7454648,7454731..7454809,7456163..7456286,7460280..7460404,7461297..7461416,7463770..7463859))
location: region:7450535-7463859:-1
so has part: feature:7463770-7463859:-1:exon
so has part: feature:7461297-7461416:-1:exon
so has part: feature:7460280-7460404:-1:exon
so has part: feature:7456163-7456286:-1:exon
so has part: feature:7454731-7454809:-1:exon
so has part: feature:7454476-7454648:-1:exon
so has part: feature:7454257-7454347:-1:exon
so has part: feature:7453765-7453883:-1:exon
so has part: feature:7452987-7453070:-1:exon
so has part: feature:7451014-7451097:-1:exon
so has part: feature:7450775-7450887:-1:exon
so has part: feature:7450535-7450678:-1:exon

XP_037549195.1
type: Protein
SIO_000068: ncbiprotein

position:7463859:-1
position: 7463859
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7463770-7463859:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7461297-7461416:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7460280-7460404:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7456163-7456286:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:7454731-7454809:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:7454476-7454648:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:7454257-7454347:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:7453765-7453883:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:7452987-7453070:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:7451014-7451097:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:7450775-7450887:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:7450535-7450678:-1:exon

myclb
type: Gene
subclass of: SO_0000704
RO_0002162: 451745
gene: myclb
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 7525943..7530087
location: region:7525943-7530087:1
so has part: feature:7525943-7530087:1:exon
subclass of: SO_0000010

119425915
type: Gene
SIO_000068: ncbigene

position:7525943:1
position: 7525943
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7530087:1
position: 7530087
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7525943-7530087:1:exon

myclb
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 451745
gene: myclb
product: MYCL proto-oncogene, bHLH transcription factor b, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 15 Proteins, and 96% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_037693471.1
SIO_010081: myclb
subclass of: SO_0000673
so part of: myclb
location: join(7525943..7526216,7526760..7527448,7528720..7530087)
location: region:7525943-7530087:1
so has part: feature:7525943-7526216:1:exon
so has part: feature:7526760-7527448:1:exon
so has part: feature:7528720-7530087:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:7525943-7526216:1:exon

position:7526216:1
position: 7526216
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:7526760-7527448:1:exon

position:7526760:1
position: 7526760
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7527448:1
position: 7527448
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:7528720-7530087:1:exon

position:7528720:1
position: 7528720
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

myclb
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 451745
gene: myclb
product: MYCL proto-oncogene, bHLH transcription factor b, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 15 Proteins, and 96% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_037693472.1
SIO_010081: myclb
subclass of: SO_0000673
so part of: myclb
location: join(7526010..7526045,7526077..7526216,7526760..7527448,7528720..7530087)
location: region:7526010-7530087:1
so has part: feature:7526010-7526045:1:exon
so has part: feature:7526077-7526216:1:exon
so has part: feature:7526760-7527448:1:exon
so has part: feature:7528720-7530087:1:exon

position:7526010:1
position: 7526010
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7526010-7526045:1:exon

position:7526045:1
position: 7526045
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:7526077-7526216:1:exon

position:7526077:1
position: 7526077
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:7526760-7527448:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7528720-7530087:1:exon

myclb
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 451745
gene: myclb
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein L-Myc-1b
translation: MPGISSAAPRYENWDMDHLDHYQHYFYDDHDPDEDFFKSTAPSEDIWKKFELVPTPPMSPIRAVDGPAKFGLLYPSLGDKLEWVSQFLGQEDEQQQQDVPCKLASGGDSFGNLSSIIIQDCMWSCVSAGQQLEKVVGERFAPCPGTGAPAKGASPGRAHGAPSDAGTVGGLAVDCVDPAAVLTFPLSGGGKKQVSSGSESHTDSSDDEDDKDDDDDDDDDDEEEIDVVTVEHHHQQQQRKPCRLVATRKPVTITVRADPHDPGTKRFHISIHQQQHNYAAPSPDVLPVASEPPRKKVRQEAFAPATHPHLNSLHHQPRLGHAPLNLDSRKSHVTVAGIRSESPTLSASSPTSSSSPSSLPYSSSSSHQLQSSPSKPPSHLSSPQSSDCEDTDKRRAHNFLERKRRNDLRSRFLSLRDEIPGLADCPKTPKVAILTRATEYLQQLHAGERQKAQERKQLRARQLQLLQRLAQLKRS
SIO_010081: myclb
subclass of: SO_0000673
so part of: myclb
location: join(7526833..7527448,7528720..7529531)
location: region:7526833-7529531:1
so has part: feature:7526833-7527448:1:exon
so has part: feature:7528720-7529531:1:exon

XP_037549399.1
type: Protein
SIO_000068: ncbiprotein

position:7526833:1
position: 7526833
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7529531:1
position: 7529531
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7526833-7527448:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7528720-7529531:1:exon

myclb
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 451745
gene: myclb
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein L-Myc-1b
translation: MPGISSAAPRYENWDMDHLDHYQHYFYDDHDPDEDFFKSTAPSEDIWKKFELVPTPPMSPIRAVDGPAKFGLLYPSLGDKLEWVSQFLGQEDEQQQQDVPCKLASGGDSFGNLSSIIIQDCMWSCVSAGQQLEKVVGERFAPCPGTGAPAKGASPGRAHGAPSDAGTVGGLAVDCVDPAAVLTFPLSGGGKKQVSSGSESHTDSSDDEDDKDDDDDDDDDDEEEIDVVTVEHHHQQQQRKPCRLVATRKPVTITVRADPHDPGTKRFHISIHQQQHNYAAPSPDVLPVASEPPRKKVRQEAFAPATHPHLNSLHHQPRLGHAPLNLDSRKSHVTVAGIRSESPTLSASSPTSSSSPSSLPYSSSSSHQLQSSPSKPPSHLSSPQSSDCEDTDKRRAHNFLERKRRNDLRSRFLSLRDEIPGLADCPKTPKVAILTRATEYLQQLHAGERQKAQERKQLRARQLQLLQRLAQLKRS
SIO_010081: myclb
subclass of: SO_0000673
so part of: myclb
location: join(7526833..7527448,7528720..7529531)
location: region:7526833-7529531:1
so has part: feature:7526833-7527448:1:exon
so has part: feature:7528720-7529531:1:exon

XP_037549400.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:7526833-7527448:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7528720-7529531:1:exon

trit1
type: Gene
subclass of: SO_0000704
RO_0002162: 451745
gene: trit1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 7532032..7599265
location: region:7532032-7599265:1
so has part: feature:7532032-7599265:1:exon
subclass of: SO_0000010

119426047
type: Gene
SIO_000068: ncbigene

position:7532032:1
position: 7532032
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7599265:1
position: 7599265
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7532032-7599265:1:exon

trit1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 451745
gene: trit1
product: tRNA isopentenyltransferase 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 12 Proteins, and 88% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_037693606.1
SIO_010081: trit1
subclass of: SO_0000673
so part of: trit1
location: join(7532032..7532211,7562570..7562710,7564586..7564684,7565123..7565183,7565381..7565468,7570509..7570651,7570747..7570858,7578318..7578430,7578939..7579016,7594470..7594579,7598249..7598366,7598814..7599265)
location: region:7532032-7599265:1
so has part: feature:7532032-7532211:1:exon
so has part: feature:7562570-7562710:1:exon
so has part: feature:7564586-7564684:1:exon
so has part: feature:7565123-7565183:1:exon
so has part: feature:7565381-7565468:1:exon
so has part: feature:7570509-7570651:1:exon
so has part: feature:7570747-7570858:1:exon
so has part: feature:7578318-7578430:1:exon
so has part: feature:7578939-7579016:1:exon
so has part: feature:7594470-7594579:1:exon
so has part: feature:7598249-7598366:1:exon
so has part: feature:7598814-7599265:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:7532032-7532211:1:exon

position:7532211:1
position: 7532211
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:7562570-7562710:1:exon

position:7562570:1
position: 7562570
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7562710:1
position: 7562710
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:7564586-7564684:1:exon

position:7564586:1
position: 7564586
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7564684:1
position: 7564684
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:7565123-7565183:1:exon

position:7565123:1
position: 7565123
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7565183:1
position: 7565183
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:7565381-7565468:1:exon

position:7565381:1
position: 7565381
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7565468:1
position: 7565468
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:7570509-7570651:1:exon

position:7570509:1
position: 7570509
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7570651:1
position: 7570651
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:7570747-7570858:1:exon

position:7570747:1
position: 7570747
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7570858:1
position: 7570858
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:7578318-7578430:1:exon

position:7578318:1
position: 7578318
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7578430:1
position: 7578430
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:7578939-7579016:1:exon

position:7578939:1
position: 7578939
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7579016:1
position: 7579016
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:7594470-7594579:1:exon

position:7594470:1
position: 7594470
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7594579:1
position: 7594579
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:7598249-7598366:1:exon

position:7598249:1
position: 7598249
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7598366:1
position: 7598366
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:7598814-7599265:1:exon

position:7598814:1
position: 7598814
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

trit1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 451745
gene: trit1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tRNA dimethylallyltransferase
translation: MAASILVRQCVLRRAMAPSLVVILGATGTGKSKLAIELGKRLQGEIISADSMQVYQGLDIITNKVTAEELAQCRHHMISFVDPLVNNYTVVDFRNKALALIDDVHKRNKLPIIVGGTNYYIESLLWRVLLDTGAQHGYTTFDPWFVSEKEAEVYKMLLDIVSCVVVLNLHPPGEAGSSGNAHRSLQIHEETGIPLSHWLAEQRGQEGSDGLGGPLRYPDACIFWLRADIKALDERLESRVDKMLSAGLIEELRDFHIRYNQQKVQDDSQNYQHGIFQSIGFKEFHDYLTAPEGSSPQEKDRLRLQGVEALKIATKRYVRKQNKWVRNRFLKRPRDNVPAVYGLDGTDVSKWEETVLNPALQILDSLSKGEEPAVEPIRAEGVEQRNEQSYHTCDLCDKVIIGDLEWTAHLNSKKHHHHVRKKRKSDPGPGLPQSTAAPPASAGSPPSEDACAAVTLHRKEASQDSSKDTTTHTGVPVTL
SIO_010081: trit1
subclass of: SO_0000673
so part of: trit1
location: join(7532053..7532211,7562570..7562710,7564586..7564684,7565123..7565183,7565381..7565468,7570509..7570651,7570747..7570858,7578318..7578430,7578939..7579016,7594470..7594579,7598249..7598366,7598814..7599031)
location: region:7532053-7599031:1
so has part: feature:7532053-7532211:1:exon
so has part: feature:7562570-7562710:1:exon
so has part: feature:7564586-7564684:1:exon
so has part: feature:7565123-7565183:1:exon
so has part: feature:7565381-7565468:1:exon
so has part: feature:7570509-7570651:1:exon
so has part: feature:7570747-7570858:1:exon
so has part: feature:7578318-7578430:1:exon
so has part: feature:7578939-7579016:1:exon
so has part: feature:7594470-7594579:1:exon
so has part: feature:7598249-7598366:1:exon
so has part: feature:7598814-7599031:1:exon

XP_037549534.1
type: Protein
SIO_000068: ncbiprotein

position:7532053:1
position: 7532053
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7599031:1
position: 7599031
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7532053-7532211:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7562570-7562710:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7564586-7564684:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7565123-7565183:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:7565381-7565468:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:7570509-7570651:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:7570747-7570858:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:7578318-7578430:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:7578939-7579016:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:7594470-7594579:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:7598249-7598366:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:7598814-7599031:1:exon

fam49al
type: Gene
subclass of: SO_0000704
RO_0002162: 451745
gene: fam49al
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(7633150..7686719)
location: region:7633150-7686719:-1
so has part: feature:7633150-7686719:-1:exon
subclass of: SO_0000010

119425937
type: Gene
SIO_000068: ncbigene

position:7633150:-1
position: 7633150
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7686719:-1
position: 7686719
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7633150-7686719:-1:exon

fam49al
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 451745
gene: fam49al
product: family with sequence similarity 49 member A, like, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_037693491.1
SIO_010081: fam49al
subclass of: SO_0000673
so part of: fam49al
location: complement(join(7633150..7634636,7634735..7634805,7636183..7636309,7637446..7637525,7637639..7637755,7638639..7638716,7638836..7638972,7640313..7640418,7643057..7643178,7654045..7654124,7658862..7658957,7686409..7686719))
location: region:7633150-7686719:-1
so has part: feature:7686409-7686719:-1:exon
so has part: feature:7658862-7658957:-1:exon
so has part: feature:7654045-7654124:-1:exon
so has part: feature:7643057-7643178:-1:exon
so has part: feature:7640313-7640418:-1:exon
so has part: feature:7638836-7638972:-1:exon
so has part: feature:7638639-7638716:-1:exon
so has part: feature:7637639-7637755:-1:exon
so has part: feature:7637446-7637525:-1:exon
so has part: feature:7636183-7636309:-1:exon
so has part: feature:7634735-7634805:-1:exon
so has part: feature:7633150-7634636:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:7686409-7686719:-1:exon

position:7686409:-1
position: 7686409
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:7658862-7658957:-1:exon

position:7658862:-1
position: 7658862
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7658957:-1
position: 7658957
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:7654045-7654124:-1:exon

position:7654045:-1
position: 7654045
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7654124:-1
position: 7654124
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:7643057-7643178:-1:exon

position:7643057:-1
position: 7643057
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7643178:-1
position: 7643178
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:7640313-7640418:-1:exon

position:7640313:-1
position: 7640313
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7640418:-1
position: 7640418
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:7638836-7638972:-1:exon

position:7638836:-1
position: 7638836
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7638972:-1
position: 7638972
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:7638639-7638716:-1:exon

position:7638639:-1
position: 7638639
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7638716:-1
position: 7638716
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:7637639-7637755:-1:exon

position:7637639:-1
position: 7637639
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7637755:-1
position: 7637755
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:7637446-7637525:-1:exon

position:7637446:-1
position: 7637446
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7637525:-1
position: 7637525
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:7636183-7636309:-1:exon

position:7636183:-1
position: 7636183
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7636309:-1
position: 7636309
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:7634735-7634805:-1:exon

position:7634735:-1
position: 7634735
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7634805:-1
position: 7634805
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:7633150-7634636:-1:exon

position:7634636:-1
position: 7634636
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

fam49al
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 451745
gene: fam49al
product: family with sequence similarity 49 member A, like, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_037693492.1
SIO_010081: fam49al
subclass of: SO_0000673
so part of: fam49al
location: complement(join(7633150..7634636,7634735..7634805,7636183..7636309,7637446..7637525,7637639..7637755,7638639..7638716,7638836..7638972,7640313..7640409,7643057..7643178,7651658..7651765))
location: region:7633150-7651765:-1
so has part: feature:7651658-7651765:-1:exon
so has part: feature:7643057-7643178:-1:exon
so has part: feature:7640313-7640409:-1:exon
so has part: feature:7638836-7638972:-1:exon
so has part: feature:7638639-7638716:-1:exon
so has part: feature:7637639-7637755:-1:exon
so has part: feature:7637446-7637525:-1:exon
so has part: feature:7636183-7636309:-1:exon
so has part: feature:7634735-7634805:-1:exon
so has part: feature:7633150-7634636:-1:exon

position:7651765:-1
position: 7651765
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7651658-7651765:-1:exon

position:7651658:-1
position: 7651658
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:7643057-7643178:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7640313-7640409:-1:exon

position:7640409:-1
position: 7640409
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:7638836-7638972:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:7638639-7638716:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:7637639-7637755:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:7637446-7637525:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:7636183-7636309:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:7634735-7634805:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:7633150-7634636:-1:exon

fam49al
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 451745
gene: fam49al
product: family with sequence similarity 49 member A, like, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 37 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_037693490.1
SIO_010081: fam49al
subclass of: SO_0000673
so part of: fam49al
location: complement(join(7633150..7634636,7634735..7634805,7636183..7636309,7637446..7637525,7637639..7637755,7638639..7638716,7638836..7638972,7640313..7640418,7643057..7643178,7651658..7651765))
location: region:7633150-7651765:-1
so has part: feature:7651658-7651765:-1:exon
so has part: feature:7643057-7643178:-1:exon
so has part: feature:7640313-7640418:-1:exon
so has part: feature:7638836-7638972:-1:exon
so has part: feature:7638639-7638716:-1:exon
so has part: feature:7637639-7637755:-1:exon
so has part: feature:7637446-7637525:-1:exon
so has part: feature:7636183-7636309:-1:exon
so has part: feature:7634735-7634805:-1:exon
so has part: feature:7633150-7634636:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:7651658-7651765:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7643057-7643178:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7640313-7640418:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7638836-7638972:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:7638639-7638716:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:7637639-7637755:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:7637446-7637525:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:7636183-7636309:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:7634735-7634805:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:7633150-7634636:-1:exon

fam49al
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 451745
gene: fam49al
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein FAM49A-like isoform X2
translation: MGNLIKVLGKDLENCPHFFLDFENAQPTEAETAVWNQVSAVLEEAHGILAELQSYNGAGQEIREAIQNPGDLALQEKAWNAVCPLVAKLKRFYEFSLRLENALRSLLEALTSPPYAPMQHLEREQALAKQFAEILHFTLSFDELKMTNPAIQNDFSYYRRTISRNRLNNQQLDAENEVNNEMANRMSLFYAEATPMLKTLSNATTKFVSENKTLPIEDTTDCLSTMACVCRVMLETPEYRCRFTNTDTMLFCMRVMVGVIILYDHVHPVGAFAKTSKIDMKGCIKVLKEQPSNSVEGLLNALRYTTRHLNDDSTSKQIRALLQ
SIO_010081: fam49al
subclass of: SO_0000673
so part of: fam49al
location: complement(join(7634573..7634636,7634735..7634805,7636183..7636309,7637446..7637525,7637639..7637755,7638639..7638716,7638836..7638972,7640313..7640418,7643057..7643178,7654045..7654114))
location: region:7634573-7654114:-1
so has part: feature:7654045-7654114:-1:exon
so has part: feature:7643057-7643178:-1:exon
so has part: feature:7640313-7640418:-1:exon
so has part: feature:7638836-7638972:-1:exon
so has part: feature:7638639-7638716:-1:exon
so has part: feature:7637639-7637755:-1:exon
so has part: feature:7637446-7637525:-1:exon
so has part: feature:7636183-7636309:-1:exon
so has part: feature:7634735-7634805:-1:exon
so has part: feature:7634573-7634636:-1:exon

XP_037549419.1
type: Protein
SIO_000068: ncbiprotein

position:7634573:-1
position: 7634573
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7654114:-1
position: 7654114
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7654045-7654114:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7643057-7643178:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7640313-7640418:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7638836-7638972:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:7638639-7638716:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:7637639-7637755:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:7637446-7637525:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:7636183-7636309:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:7634735-7634805:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:7634573-7634636:-1:exon

fam49al
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 451745
gene: fam49al
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein FAM49A-like isoform X3
translation: MGNLLKVLACAELEHGPIVFLDFEHAQPTEAETAVWNQVSAVLEEAHGILAELQSYNGAGQEIRENPGDLALQEKAWNAVCPLVAKLKRFYEFSLRLENALRSLLEALTSPPYAPMQHLEREQALAKQFAEILHFTLSFDELKMTNPAIQNDFSYYRRTISRNRLNNQQLDAENEVNNEMANRMSLFYAEATPMLKTLSNATTKFVSENKTLPIEDTTDCLSTMACVCRVMLETPEYRCRFTNTDTMLFCMRVMVGVIILYDHVHPVGAFAKTSKIDMKGCIKVLKEQPSNSVEGLLNALRYTTRHLNDDSTSKQIRALLQ
SIO_010081: fam49al
subclass of: SO_0000673
so part of: fam49al
location: complement(join(7634573..7634636,7634735..7634805,7636183..7636309,7637446..7637525,7637639..7637755,7638639..7638716,7638836..7638972,7640313..7640409,7643057..7643178,7651658..7651730))
location: region:7634573-7651730:-1
so has part: feature:7651658-7651730:-1:exon
so has part: feature:7643057-7643178:-1:exon
so has part: feature:7640313-7640409:-1:exon
so has part: feature:7638836-7638972:-1:exon
so has part: feature:7638639-7638716:-1:exon
so has part: feature:7637639-7637755:-1:exon
so has part: feature:7637446-7637525:-1:exon
so has part: feature:7636183-7636309:-1:exon
so has part: feature:7634735-7634805:-1:exon
so has part: feature:7634573-7634636:-1:exon

XP_037549420.1
type: Protein
SIO_000068: ncbiprotein

position:7651730:-1
position: 7651730
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7651658-7651730:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7643057-7643178:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7640313-7640409:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7638836-7638972:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:7638639-7638716:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:7637639-7637755:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:7637446-7637525:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:7636183-7636309:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:7634735-7634805:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:7634573-7634636:-1:exon

fam49al
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 451745
gene: fam49al
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein FAM49A-like isoform X1
translation: MGNLLKVLACAELEHGPIVFLDFEHAQPTEAETAVWNQVSAVLEEAHGILAELQSYNGAGQEIREAIQNPGDLALQEKAWNAVCPLVAKLKRFYEFSLRLENALRSLLEALTSPPYAPMQHLEREQALAKQFAEILHFTLSFDELKMTNPAIQNDFSYYRRTISRNRLNNQQLDAENEVNNEMANRMSLFYAEATPMLKTLSNATTKFVSENKTLPIEDTTDCLSTMACVCRVMLETPEYRCRFTNTDTMLFCMRVMVGVIILYDHVHPVGAFAKTSKIDMKGCIKVLKEQPSNSVEGLLNALRYTTRHLNDDSTSKQIRALLQ
SIO_010081: fam49al
subclass of: SO_0000673
so part of: fam49al
location: complement(join(7634573..7634636,7634735..7634805,7636183..7636309,7637446..7637525,7637639..7637755,7638639..7638716,7638836..7638972,7640313..7640418,7643057..7643178,7651658..7651730))
location: region:7634573-7651730:-1
so has part: feature:7651658-7651730:-1:exon
so has part: feature:7643057-7643178:-1:exon
so has part: feature:7640313-7640418:-1:exon
so has part: feature:7638836-7638972:-1:exon
so has part: feature:7638639-7638716:-1:exon
so has part: feature:7637639-7637755:-1:exon
so has part: feature:7637446-7637525:-1:exon
so has part: feature:7636183-7636309:-1:exon
so has part: feature:7634735-7634805:-1:exon
so has part: feature:7634573-7634636:-1:exon

XP_037549418.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:7651658-7651730:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7643057-7643178:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7640313-7640418:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7638836-7638972:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:7638639-7638716:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:7637639-7637755:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:7637446-7637525:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:7636183-7636309:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:7634735-7634805:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:7634573-7634636:-1:exon

LOC119426200
type: Gene
subclass of: SO_0000704
RO_0002162: 451745
gene: LOC119426200
note: Derived by automated computational analysis using gene prediction method: cmsearch.
pseudo: true
so part of: sequence
location: 7672179..7672296
location: region:7672179-7672296:1
so has part: feature:7672179-7672296:1:exon

119426200
type: Gene
SIO_000068: ncbigene

position:7672179:1
position: 7672179
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7672296:1
position: 7672296
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7672179-7672296:1:exon

LOC119426200
type: Exon
subclass of: SO_0000147
RO_0002162: 451745
gene: LOC119426200
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00001
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
pseudo: true
SIO_010081: LOC119426200
subclass of: SO_0000673
so part of: LOC119426200
location: 7672179..7672296
location: region:7672179-7672296:1
so has part: feature:7672179-7672296:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:7672179-7672296:1:exon

txnl4a
type: Gene
subclass of: SO_0000704
RO_0002162: 451745
gene: txnl4a
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(7725276..7727983)
location: region:7725276-7727983:-1
so has part: feature:7725276-7727983:-1:exon
subclass of: SO_0000010

119425262
type: Gene
SIO_000068: ncbigene

position:7725276:-1
position: 7725276
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7727983:-1
position: 7727983
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7725276-7727983:-1:exon

txnl4a
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 451745
gene: txnl4a
product: thioredoxin-like 4A
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 25 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_037692786.1
SIO_010081: txnl4a
subclass of: SO_0000673
so part of: txnl4a
location: complement(join(7725276..7725733,7725834..7725937,7727504..7727684,7727866..7727983))
location: region:7725276-7727983:-1
so has part: feature:7727866-7727983:-1:exon
so has part: feature:7727504-7727684:-1:exon
so has part: feature:7725834-7725937:-1:exon
so has part: feature:7725276-7725733:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:7727866-7727983:-1:exon

position:7727866:-1
position: 7727866
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:7727504-7727684:-1:exon

position:7727504:-1
position: 7727504
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7727684:-1
position: 7727684
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:7725834-7725937:-1:exon

position:7725834:-1
position: 7725834
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7725937:-1
position: 7725937
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:7725276-7725733:-1:exon

position:7725733:-1
position: 7725733
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

txnl4a
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 451745
gene: txnl4a
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: thioredoxin-like protein 4A
translation: MSYMLPHLHNGWQVDQAILSEEDRVLVIRFGHDWDPTCMKMDEVLYSIAEKVKNFAVIYLVDITEVPDFNKMYELYDPCTIMFFFRNKHIMIDLGTGNNNKINWIIEDKQEMIDIVETVYRGARKGRGLVVSPKDYSTKYRY
SIO_010081: txnl4a
subclass of: SO_0000673
so part of: txnl4a
location: complement(join(7725562..7725733,7725834..7725937,7727504..7727656))
location: region:7725562-7727656:-1
so has part: feature:7727504-7727656:-1:exon
so has part: feature:7725834-7725937:-1:exon
so has part: feature:7725562-7725733:-1:exon

XP_037548714.1
type: Protein
SIO_000068: ncbiprotein

position:7725562:-1
position: 7725562
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7727656:-1
position: 7727656
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7727504-7727656:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7725834-7725937:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7725562-7725733:-1:exon

LOC119426049
type: Gene
subclass of: SO_0000704
RO_0002162: 451745
gene: LOC119426049
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(7742246..7763358)
location: region:7742246-7763358:-1
so has part: feature:7742246-7763358:-1:exon
subclass of: SO_0000010

119426049
type: Gene
SIO_000068: ncbigene

position:7742246:-1
position: 7742246
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7763358:-1
position: 7763358
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7742246-7763358:-1:exon

LOC119426049
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 451745
gene: LOC119426049
product: NLR family CARD domain-containing protein 3-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 83 Proteins, and 6% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_037693608.1
SIO_010081: LOC119426049
subclass of: SO_0000673
so part of: LOC119426049
location: complement(join(7742246..7742438,7752555..7752731,7756959..7757129,7760393..7762190,7762357..7762592,7762861..7762980,7763270..7763358))
location: region:7742246-7763358:-1
so has part: feature:7763270-7763358:-1:exon
so has part: feature:7762861-7762980:-1:exon
so has part: feature:7762357-7762592:-1:exon
so has part: feature:7760393-7762190:-1:exon
so has part: feature:7756959-7757129:-1:exon
so has part: feature:7752555-7752731:-1:exon
so has part: feature:7742246-7742438:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:7763270-7763358:-1:exon

position:7763270:-1
position: 7763270
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:7762861-7762980:-1:exon

position:7762861:-1
position: 7762861
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7762980:-1
position: 7762980
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:7762357-7762592:-1:exon

position:7762357:-1
position: 7762357
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7762592:-1
position: 7762592
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:7760393-7762190:-1:exon

position:7760393:-1
position: 7760393
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7762190:-1
position: 7762190
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:7756959-7757129:-1:exon

position:7756959:-1
position: 7756959
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7757129:-1
position: 7757129
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:7752555-7752731:-1:exon

position:7752555:-1
position: 7752555
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7752731:-1
position: 7752731
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:7742246-7742438:-1:exon

position:7742438:-1
position: 7742438
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC119426049
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 451745
gene: LOC119426049
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: substituted 1 base at 1 genomic stop codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
transl except: (pos:complement(7760401..7760403),aa:OTHER)
product: LOW QUALITY PROTEIN: NLR family CARD domain-containing protein 3-like
translation: MGRDPVTRRSPTSPSPRPGSRVGPRQPTSGVQNLRQRAEIPVPHCLFVKSDMSKGLLPALSEELGPSDTKGRKRSGVCEEEQLSCCSLCQNVLKDPISTSCGQWFCRRCITSYWDQSASSEPSSCPQCGQRPRSRSGLQTASQSSCVQDVGLQEVLEKHRISLRRKCERVTEGCDETGSRTLLNRIYTELYITEGQSEEVNTQHEVRQLETASRTKSLQETPIRCQDIFKALPEQHGSIRVVLTNGVAGVGKTFSVLKFTLDWAEGLENQDVSVVVVLSFRELNLIRDEQHSLLTLLHVFHPTLQKVQAEKLAVWKLLFIFDGLDESRLHLDFTNRQLLSDVTQKSSLNVLLTNLIKGNLLPSALVWITSRPSAANQIPPSCVDRLTEVRGFTDNQKEEYFRRRFSDEELSYRIISHIKTSRSLHIMCGIPVFCWITATVLDHMLTREQRGELPKTMTDMYSHFLLVQTTRKKSKYHEGLETSPQELTEADRELLLKLGRLAFEHLEEGNIMFYQEDLEQCGLDVTEALVYSGVCTEIFRKECLIFQKPVYCFVHLSVQEFLAAVYMFHCFTTRNIEVMERFLGEKNRYSYLEDFLKRVMKKSLHSKNGHLDLFVRFFHGVSVESNQRLLGGLLGQTETSPKTIQRIINNLKKMNSYDLSPDRSINIFQCLMEMQDLSVYQEIQEFLKSANRSEKLSEIQCSALAYMLQMSEEVLDELDLKKYNTSDEGRLRLIPAVRNCRKFLXVQIAAVRLSETHCEVVASALKSNPSHLTQLDLSDNDLSDSGVKHLCSGLESPNCRLEVLRLRSCWLSEISCSSLGSALKFNPSHLTQLDLSQNLQLSDSGVKELCGFLESPNCRLEVLRLECCNLSEISCSSLVAALKSNPSHLTQLDLSYNNLQAPDVQQLFDLVESPDYKLQTLGSVDVI
SIO_010081: LOC119426049
subclass of: SO_0000673
so part of: LOC119426049
location: complement(join(7742246..7742438,7752555..7752731,7756959..7757129,7760393..7762190,7762357..7762592,7762861..7762980,7763270..7763358))
location: region:7742246-7763358:-1
so has part: feature:7763270-7763358:-1:exon
so has part: feature:7762861-7762980:-1:exon
so has part: feature:7762357-7762592:-1:exon
so has part: feature:7760393-7762190:-1:exon
so has part: feature:7756959-7757129:-1:exon
so has part: feature:7752555-7752731:-1:exon
so has part: feature:7742246-7742438:-1:exon

XP_037549536.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:7763270-7763358:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7762861-7762980:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7762357-7762592:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7760393-7762190:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:7756959-7757129:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:7752555-7752731:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:7742246-7742438:-1:exon

LOC119426051
type: Gene
subclass of: SO_0000704
RO_0002162: 451745
gene: LOC119426051
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 7787342..7789185
location: region:7787342-7789185:1
so has part: feature:7787342-7789185:1:exon
subclass of: SO_0000010

119426051
type: Gene
SIO_000068: ncbigene

position:7787342:1
position: 7787342
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7789185:1
position: 7789185
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7787342-7789185:1:exon

LOC119426051
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 451745
gene: LOC119426051
product: E3 ubiquitin-protein ligase znrf2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 91% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_037693609.1
SIO_010081: LOC119426051
subclass of: SO_0000673
so part of: LOC119426051
location: join(7787342..7788071,7789052..7789185)
location: region:7787342-7789185:1
so has part: feature:7787342-7788071:1:exon
so has part: feature:7789052-7789185:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:7787342-7788071:1:exon

position:7788071:1
position: 7788071
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:7789052-7789185:1:exon

position:7789052:1
position: 7789052
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC119426051
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 451745
gene: LOC119426051
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: E3 ubiquitin-protein ligase znrf2
translation: MGAKQSAPALDGRTRAYSSSDLPSGNSGAAERIAGFRYTNGPDGPRIRYTGGGGPTSSGMSIPAGGRSESHNQSLDGTDGDEEQLGGPEAHRLLIGSLPSHLSPRLLGGFHCPVCSKYMAADEIEKHLLLCFSKTRLTYNSKVGACDGVARL
SIO_010081: LOC119426051
subclass of: SO_0000673
so part of: LOC119426051
location: join(7787747..7788071,7789052..7789185)
location: region:7787747-7789185:1
so has part: feature:7787747-7788071:1:exon
so has part: feature:7789052-7789185:1:exon

XP_037549537.1
type: Protein
SIO_000068: ncbiprotein

position:7787747:1
position: 7787747
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7787747-7788071:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7789052-7789185:1:exon

mturn
type: Gene
subclass of: SO_0000704
RO_0002162: 451745
gene: mturn
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(7826939..7836947)
location: region:7826939-7836947:-1
so has part: feature:7826939-7836947:-1:exon
subclass of: SO_0000010

119425357
type: Gene
SIO_000068: ncbigene

position:7826939:-1
position: 7826939
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7836947:-1
position: 7836947
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7826939-7836947:-1:exon

mturn
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 451745
gene: mturn
product: maturin, neural progenitor differentiation regulator homolog (Xenopus)
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_037692878.1
SIO_010081: mturn
subclass of: SO_0000673
so part of: mturn
location: complement(join(7826939..7828411,7829794..7829916,7836548..7836947))
location: region:7826939-7836947:-1
so has part: feature:7836548-7836947:-1:exon
so has part: feature:7829794-7829916:-1:exon
so has part: feature:7826939-7828411:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:7836548-7836947:-1:exon

position:7836548:-1
position: 7836548
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:7829794-7829916:-1:exon

position:7829794:-1
position: 7829794
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7829916:-1
position: 7829916
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:7826939-7828411:-1:exon

position:7828411:-1
position: 7828411
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

mturn
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 451745
gene: mturn
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: maturin
translation: MEFKHLVEAAEKWCSGNPFDLIFAEETDERRLDFYAEPGVSFYVLCPGETDSFHVWSESEDCLPFLQLAQDYISSCGKKTLLEVLEKVFTSFRPLLGLPDIDDDSFEPYHADMEGEPGPDHQQMGVSQQ
SIO_010081: mturn
subclass of: SO_0000673
so part of: mturn
location: complement(join(7828304..7828411,7829794..7829916,7836548..7836706))
location: region:7828304-7836706:-1
so has part: feature:7836548-7836706:-1:exon
so has part: feature:7829794-7829916:-1:exon
so has part: feature:7828304-7828411:-1:exon

XP_037548806.1
type: Protein
SIO_000068: ncbiprotein

position:7828304:-1
position: 7828304
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7836706:-1
position: 7836706
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7836548-7836706:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7829794-7829916:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7828304-7828411:-1:exon

trnak-uuu
type: Gene
subclass of: SO_0000704
RO_0002162: 451745
gene: trnak-uuu
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
so part of: sequence
location: complement(7833656..7833729)
location: region:7833656-7833729:-1
so has part: feature:7833656-7833729:-1:exon
subclass of: SO_0000663

119426209
type: Gene
SIO_000068: ncbigene

position:7833656:-1
position: 7833656
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7833729:-1
position: 7833729
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7833656-7833729:-1:exon

trnak-uuu
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 451745
gene: trnak-uuu
product: tRNA-Lys
inference: COORDINATES: profile:tRNAscan-SE:2.0.4
note: transfer RNA lysine (anticodon UUU); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:complement(7833694..7833696),aa:Lys, seq:ttt)
SIO_010081: trnak-uuu
subclass of: SO_0000673
so part of: trnak-uuu
location: complement(7833656..7833729)
location: region:7833656-7833729:-1
so has part: feature:7833656-7833729:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:7833656-7833729:-1:exon

LOC119425857
type: Gene
subclass of: SO_0000704
RO_0002162: 451745
gene: LOC119425857
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 7841623..7867811
location: region:7841623-7867811:1
so has part: feature:7841623-7867811:1:exon
subclass of: SO_0000010

119425857
type: Gene
SIO_000068: ncbigene

position:7841623:1
position: 7841623
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7867811:1
position: 7867811
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7841623-7867811:1:exon

LOC119425857
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 451745
gene: LOC119425857
product: SH3 domain-binding protein 5, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 17 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_037693409.1
SIO_010081: LOC119425857
subclass of: SO_0000673
so part of: LOC119425857
location: join(7841623..7841817,7842104..7842166,7847743..7847871,7862152..7862316,7862416..7862546,7862843..7862885,7863139..7863355,7865530..7865865,7867606..7867811)
location: region:7841623-7867811:1
so has part: feature:7841623-7841817:1:exon
so has part: feature:7842104-7842166:1:exon
so has part: feature:7847743-7847871:1:exon
so has part: feature:7862152-7862316:1:exon
so has part: feature:7862416-7862546:1:exon
so has part: feature:7862843-7862885:1:exon
so has part: feature:7863139-7863355:1:exon
so has part: feature:7865530-7865865:1:exon
so has part: feature:7867606-7867811:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:7841623-7841817:1:exon

position:7841817:1
position: 7841817
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:7842104-7842166:1:exon

position:7842104:1
position: 7842104
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7842166:1
position: 7842166
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:7847743-7847871:1:exon

position:7847743:1
position: 7847743
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7847871:1
position: 7847871
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:7862152-7862316:1:exon

position:7862152:1
position: 7862152
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7862316:1
position: 7862316
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:7862416-7862546:1:exon

position:7862416:1
position: 7862416
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7862546:1
position: 7862546
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:7862843-7862885:1:exon

position:7862843:1
position: 7862843
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7862885:1
position: 7862885
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:7863139-7863355:1:exon

position:7863139:1
position: 7863139
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7863355:1
position: 7863355
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:7865530-7865865:1:exon

position:7865530:1
position: 7865530
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7865865:1
position: 7865865
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:7867606-7867811:1:exon

position:7867606:1
position: 7867606
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC119425857
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 451745
gene: LOC119425857
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: SH3 domain-binding protein 5 isoform X1
translation: MDGSGNNCEDEEGPQEEEEVDPRIQGELEKLNQSTDGINRWESELEDYRQRFRDVLVEATVKLDELMKKLGRAVDDSKPYWEARKLARKAQAEAQKATQEFQRAVEILRAAKETIALAEEKLLEEDSRQFDSAWQEMLNHATQKVMEAEQARTQSEAEHKKTAANYNSCMGHMKLLEKKLRRSISKSRPYFELKARYYLQLEQLKHHVDERQAKLVVAKAEYRAALRNLESISEEIHAHRRSLAIGTRERGVGAEGDEGHEDIANFTMESDGLSMVSVSMDEVGSQSSEEEANTHTTSSPSSSSSHPPPPASTPLSTPCLFPTSPSSRSLSSSSSSSSSCPSGLDLESPCSSHSADSVCGSGPASPVLGPRSQCSGASSPDCDQERGDRAEGAGGAEVSLGLNKLTLTGAQEQEDSEDEEDPHFINTEICSPSAATAILLFNSV
SIO_010081: LOC119425857
subclass of: SO_0000673
so part of: LOC119425857
location: join(7841743..7841817,7842104..7842166,7847743..7847871,7862152..7862316,7862416..7862546,7862843..7862885,7863139..7863355,7865530..7865865,7867606..7867781)
location: region:7841743-7867781:1
so has part: feature:7841743-7841817:1:exon
so has part: feature:7842104-7842166:1:exon
so has part: feature:7847743-7847871:1:exon
so has part: feature:7862152-7862316:1:exon
so has part: feature:7862416-7862546:1:exon
so has part: feature:7862843-7862885:1:exon
so has part: feature:7863139-7863355:1:exon
so has part: feature:7865530-7865865:1:exon
so has part: feature:7867606-7867781:1:exon

XP_037549337.1
type: Protein
SIO_000068: ncbiprotein

position:7841743:1
position: 7841743
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7867781:1
position: 7867781
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7841743-7841817:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7842104-7842166:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7847743-7847871:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7862152-7862316:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:7862416-7862546:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:7862843-7862885:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:7863139-7863355:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:7865530-7865865:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:7867606-7867781:1:exon

LOC119425857
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 451745
gene: LOC119425857
product: SH3 domain-binding protein 5, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_037693410.1
SIO_010081: LOC119425857
subclass of: SO_0000673
so part of: LOC119425857
location: join(7854044..7854085,7862152..7862316,7862416..7862546,7862843..7862885,7863139..7863355,7865530..7865865,7867606..7867811)
location: region:7854044-7867811:1
so has part: feature:7854044-7854085:1:exon
so has part: feature:7862152-7862316:1:exon
so has part: feature:7862416-7862546:1:exon
so has part: feature:7862843-7862885:1:exon
so has part: feature:7863139-7863355:1:exon
so has part: feature:7865530-7865865:1:exon
so has part: feature:7867606-7867811:1:exon

position:7854044:1
position: 7854044
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7854044-7854085:1:exon

position:7854085:1
position: 7854085
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:7862152-7862316:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7862416-7862546:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7862843-7862885:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:7863139-7863355:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:7865530-7865865:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:7867606-7867811:1:exon

LOC119425857
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 451745
gene: LOC119425857
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: SH3 domain-binding protein 5 isoform X2
translation: MEKEEWERSEAQAEAQKATQEFQRAVEILRAAKETIALAEEKLLEEDSRQFDSAWQEMLNHATQKVMEAEQARTQSEAEHKKTAANYNSCMGHMKLLEKKLRRSISKSRPYFELKARYYLQLEQLKHHVDERQAKLVVAKAEYRAALRNLESISEEIHAHRRSLAIGTRERGVGAEGDEGHEDIANFTMESDGLSMVSVSMDEVGSQSSEEEANTHTTSSPSSSSSHPPPPASTPLSTPCLFPTSPSSRSLSSSSSSSSSCPSGLDLESPCSSHSADSVCGSGPASPVLGPRSQCSGASSPDCDQERGDRAEGAGGAEVSLGLNKLTLTGAQEQEDSEDEEDPHFINTEICSPSAATAILLFNSV
SIO_010081: LOC119425857
subclass of: SO_0000673
so part of: LOC119425857
location: join(7854056..7854085,7862152..7862316,7862416..7862546,7862843..7862885,7863139..7863355,7865530..7865865,7867606..7867781)
location: region:7854056-7867781:1
so has part: feature:7854056-7854085:1:exon
so has part: feature:7862152-7862316:1:exon
so has part: feature:7862416-7862546:1:exon
so has part: feature:7862843-7862885:1:exon
so has part: feature:7863139-7863355:1:exon
so has part: feature:7865530-7865865:1:exon
so has part: feature:7867606-7867781:1:exon

XP_037549338.1
type: Protein
SIO_000068: ncbiprotein

position:7854056:1
position: 7854056
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7854056-7854085:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7862152-7862316:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7862416-7862546:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7862843-7862885:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:7863139-7863355:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:7865530-7865865:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:7867606-7867781:1:exon

zgc:110239
type: Gene
subclass of: SO_0000704
RO_0002162: 451745
gene: zgc:110239
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 7875218..7887005
location: region:7875218-7887005:1
so has part: feature:7875218-7887005:1:exon
subclass of: SO_0000010

119425789
type: Gene
SIO_000068: ncbigene

position:7875218:1
position: 7875218
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7887005:1
position: 7887005
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7875218-7887005:1:exon

zgc:110239
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 451745
gene: zgc:110239
product: uncharacterized protein LOC550326 homolog
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 34 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_037693336.1
SIO_010081: zgc:110239
subclass of: SO_0000673
so part of: zgc:110239
location: join(7875218..7875355,7875686..7875745,7875815..7875907,7878779..7878951,7880287..7880536,7880609..7880804,7880883..7881076,7881156..7881247,7884261..7884422,7886077..7886266,7886343..7887005)
location: region:7875218-7887005:1
so has part: feature:7875218-7875355:1:exon
so has part: feature:7875686-7875745:1:exon
so has part: feature:7875815-7875907:1:exon
so has part: feature:7878779-7878951:1:exon
so has part: feature:7880287-7880536:1:exon
so has part: feature:7880609-7880804:1:exon
so has part: feature:7880883-7881076:1:exon
so has part: feature:7881156-7881247:1:exon
so has part: feature:7884261-7884422:1:exon
so has part: feature:7886077-7886266:1:exon
so has part: feature:7886343-7887005:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:7875218-7875355:1:exon

position:7875355:1
position: 7875355
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:7875686-7875745:1:exon

position:7875686:1
position: 7875686
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7875745:1
position: 7875745
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:7875815-7875907:1:exon

position:7875815:1
position: 7875815
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7875907:1
position: 7875907
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:7878779-7878951:1:exon

position:7878779:1
position: 7878779
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7878951:1
position: 7878951
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:7880287-7880536:1:exon

position:7880287:1
position: 7880287
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7880536:1
position: 7880536
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:7880609-7880804:1:exon

position:7880609:1
position: 7880609
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7880804:1
position: 7880804
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:7880883-7881076:1:exon

position:7880883:1
position: 7880883
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7881076:1
position: 7881076
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:7881156-7881247:1:exon

position:7881156:1
position: 7881156
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7881247:1
position: 7881247
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:7884261-7884422:1:exon

position:7884261:1
position: 7884261
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7884422:1
position: 7884422
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:7886077-7886266:1:exon

position:7886077:1
position: 7886077
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7886266:1
position: 7886266
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:7886343-7887005:1:exon

position:7886343:1
position: 7886343
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

zgc:110239
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 451745
gene: zgc:110239
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: digestive cysteine proteinase 1
translation: MVRLFAVAVLLWAACGTEGKAVPSLPDFGNTYHVKGVISLPYAEIVEPFEGWFDLTTKSSRIDYYNGQVSTYQLGSQQQFGVAYKITPETTEEEQNVIKCFQINGTKEEVVTPQTSLPDVQGFQFLRMESYGGSLCEVWQNVTTVGNKKNTYTLWVTNPEKDGKTAVPLHYEMMGYNTLLMSHYDKYLVDYKEFSTHLDPIVFSLPEGITCGGFPGPGVEHHMLANPMKDLIHTTAAGHSQKMFNHFKEKFQRQYSEEKEHEEREHAFLHNLRYVHSKNRAGLSFSLALNSMSDRTMSELATMRGRQRGKTPNKGLPFPSRLYEGVKVPESLDWRLYGAVTPVKDQAICGSCWSFATTGSVEGALFLKTGSLQVLSQQVLVDCSWGFGNNGCDGGEEWRAYEWIMKHGGIATTETYGAYMGMNGFCHVNSSQLTAQIKSYTNVTSGDAEALKLALFKNGPTAVSIDASHRSFVFYSHGVYYEPACGNTTNDLDHAVLAVGYGTLNGEPYWLIKNSWSTYWGNAGYILMSMKDNNCGVTTDATYVTLA
SIO_010081: zgc:110239
subclass of: SO_0000673
so part of: zgc:110239
location: join(7875310..7875355,7875686..7875745,7875815..7875907,7878779..7878951,7880287..7880536,7880609..7880804,7880883..7881076,7881156..7881247,7884261..7884422,7886077..7886266,7886343..7886530)
location: region:7875310-7886530:1
so has part: feature:7875310-7875355:1:exon
so has part: feature:7875686-7875745:1:exon
so has part: feature:7875815-7875907:1:exon
so has part: feature:7878779-7878951:1:exon
so has part: feature:7880287-7880536:1:exon
so has part: feature:7880609-7880804:1:exon
so has part: feature:7880883-7881076:1:exon
so has part: feature:7881156-7881247:1:exon
so has part: feature:7884261-7884422:1:exon
so has part: feature:7886077-7886266:1:exon
so has part: feature:7886343-7886530:1:exon

XP_037549264.1
type: Protein
SIO_000068: ncbiprotein

position:7875310:1
position: 7875310
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7886530:1
position: 7886530
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7875310-7875355:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7875686-7875745:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7875815-7875907:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7878779-7878951:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:7880287-7880536:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:7880609-7880804:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:7880883-7881076:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:7881156-7881247:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:7884261-7884422:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:7886077-7886266:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:7886343-7886530:1:exon

si:dkey-166k12.1
type: Gene
subclass of: SO_0000704
RO_0002162: 451745
gene: si:dkey-166k12.1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(7890474..7905182)
location: region:7890474-7905182:-1
so has part: feature:7890474-7905182:-1:exon
subclass of: SO_0000010

119426052
type: Gene
SIO_000068: ncbigene

position:7890474:-1
position: 7890474
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7905182:-1
position: 7905182
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7890474-7905182:-1:exon

si:dkey-166k12.1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 451745
gene: si:dkey-166k12.1
product: solute carrier family 22 member 13
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 20 Proteins, and 24% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_037693610.1
SIO_010081: si:dkey-166k12.1
subclass of: SO_0000673
so part of: si:dkey-166k12.1
location: complement(join(7890474..7890579,7891677..7891889,7891973..7892081,7892168..7892379,7893293..7893399,7894809..7894923,7895074..7895242,7895845..7895999,7898065..7898168,7904862..7905182))
location: region:7890474-7905182:-1
so has part: feature:7904862-7905182:-1:exon
so has part: feature:7898065-7898168:-1:exon
so has part: feature:7895845-7895999:-1:exon
so has part: feature:7895074-7895242:-1:exon
so has part: feature:7894809-7894923:-1:exon
so has part: feature:7893293-7893399:-1:exon
so has part: feature:7892168-7892379:-1:exon
so has part: feature:7891973-7892081:-1:exon
so has part: feature:7891677-7891889:-1:exon
so has part: feature:7890474-7890579:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:7904862-7905182:-1:exon

position:7904862:-1
position: 7904862
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:7898065-7898168:-1:exon

position:7898065:-1
position: 7898065
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7898168:-1
position: 7898168
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:7895845-7895999:-1:exon

position:7895845:-1
position: 7895845
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7895999:-1
position: 7895999
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:7895074-7895242:-1:exon

position:7895074:-1
position: 7895074
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7895242:-1
position: 7895242
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:7894809-7894923:-1:exon

position:7894809:-1
position: 7894809
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7894923:-1
position: 7894923
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:7893293-7893399:-1:exon

position:7893293:-1
position: 7893293
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7893399:-1
position: 7893399
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:7892168-7892379:-1:exon

position:7892168:-1
position: 7892168
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7892379:-1
position: 7892379
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:7891973-7892081:-1:exon

position:7891973:-1
position: 7891973
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7892081:-1
position: 7892081
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:7891677-7891889:-1:exon

position:7891677:-1
position: 7891677
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7891889:-1
position: 7891889
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:7890474-7890579:-1:exon

position:7890579:-1
position: 7890579
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

si:dkey-166k12.1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 451745
gene: si:dkey-166k12.1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: solute carrier family 22 member 13
translation: MNFDQILASIGGFGRYQKILYIWICLPQILLAFHMMVSVFTGATPPHQCWEGPRSGAGNQTWIPRTLNLSLPDSSCFSSLNRTEPVPCSHGWVYSSEIFQSTTVTEWDLVCSRAKLNSYGSSVYMFGLLVGSVVFGAMADRYGRRLVLLWSIALQTVFGVAVAFAPNFPVYVILRFAVGTTISGVIINAFVLGTEWTCTKRRMLAGIITDYTFGLGYMLLAGVACLIRDWRKLQLAISAPGFLLIFYIWVLPQSARWLIANDRRKEAIALLKKAALVNGRVLPPAVQDEKWDILGGAKQRHSPVDLVRRPQMRKRAIILFYIWFVNVLVYYGLSLGVSRLGTDLYLTQFVFGLVEIPARTLVLLVLPFSRRLSQSGFLAVGGLACLLMLSIPADHPNILTGLAMVGKFGITGSFAVIYVYTAELFPTVVRQTGIGVCGMFARLGGVLAPIINMLDNHSPATPLIIFGTSPLLGAVFALALPETADRPLPDTLDDAETWDDSLVPTKTNPELCEDFSPSASGTEKQEQAGLKGVKG
SIO_010081: si:dkey-166k12.1
subclass of: SO_0000673
so part of: si:dkey-166k12.1
location: complement(join(7890474..7890579,7891677..7891889,7891973..7892081,7892168..7892379,7893293..7893399,7894809..7894923,7895074..7895242,7895845..7895999,7898065..7898168,7904862..7905179))
location: region:7890474-7905179:-1
so has part: feature:7904862-7905179:-1:exon
so has part: feature:7898065-7898168:-1:exon
so has part: feature:7895845-7895999:-1:exon
so has part: feature:7895074-7895242:-1:exon
so has part: feature:7894809-7894923:-1:exon
so has part: feature:7893293-7893399:-1:exon
so has part: feature:7892168-7892379:-1:exon
so has part: feature:7891973-7892081:-1:exon
so has part: feature:7891677-7891889:-1:exon
so has part: feature:7890474-7890579:-1:exon

XP_037549538.1
type: Protein
SIO_000068: ncbiprotein

position:7905179:-1
position: 7905179
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7904862-7905179:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7898065-7898168:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7895845-7895999:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7895074-7895242:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:7894809-7894923:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:7893293-7893399:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:7892168-7892379:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:7891973-7892081:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:7891677-7891889:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:7890474-7890579:-1:exon

LOC119425664
type: Gene
subclass of: SO_0000704
RO_0002162: 451745
gene: LOC119425664
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 7914822..7944841
location: region:7914822-7944841:1
so has part: feature:7914822-7944841:1:exon
subclass of: SO_0000010

119425664
type: Gene
SIO_000068: ncbigene

position:7914822:1
position: 7914822
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7944841:1
position: 7944841
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7914822-7944841:1:exon

LOC119425664
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 451745
gene: LOC119425664
product: trafficking kinesin-binding protein 1
inference: similar to RNA sequence (same species):INSD:GELZ01032438.1
exception: annotated by transcript or proteomic data
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: added 203 bases not found in genome assembly; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 Proteins, and 97% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_037693206.1
SIO_010081: LOC119425664
subclass of: SO_0000673
so part of: LOC119425664
location: join(7914822..>7914951,7924574..7924650,7926655..7926771,7926854..7926954,7928009..7928108,7928184..7928262,7934173..7934303,7934376..7934450,7934527..7934664,7934738..7934814,7936076..7936306,7936905..7937200,7941387..7941505,7941775..7941982,7943454..7943559,7943902..7944027,7944218..7944841)
location: region:7914822-7944841:1
so has part: feature:7914822-7914951:1:exon
so has part: feature:7924574-7924650:1:exon
so has part: feature:7926655-7926771:1:exon
so has part: feature:7926854-7926954:1:exon
so has part: feature:7928009-7928108:1:exon
so has part: feature:7928184-7928262:1:exon
so has part: feature:7934173-7934303:1:exon
so has part: feature:7934376-7934450:1:exon
so has part: feature:7934527-7934664:1:exon
so has part: feature:7934738-7934814:1:exon
so has part: feature:7936076-7936306:1:exon
so has part: feature:7936905-7937200:1:exon
so has part: feature:7941387-7941505:1:exon
so has part: feature:7941775-7941982:1:exon
so has part: feature:7943454-7943559:1:exon
so has part: feature:7943902-7944027:1:exon
so has part: feature:7944218-7944841:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:7914822-7914951:1:exon

position:7914951:1
position: 7914951
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 2
SIO_000628: feature:7924574-7924650:1:exon

position:7924574:1
position: 7924574
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7924650:1
position: 7924650
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:7926655-7926771:1:exon

position:7926655:1
position: 7926655
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7926771:1
position: 7926771
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:7926854-7926954:1:exon

position:7926854:1
position: 7926854
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7926954:1
position: 7926954
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:7928009-7928108:1:exon

position:7928009:1
position: 7928009
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7928108:1
position: 7928108
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:7928184-7928262:1:exon

position:7928184:1
position: 7928184
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7928262:1
position: 7928262
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:7934173-7934303:1:exon

position:7934173:1
position: 7934173
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7934303:1
position: 7934303
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:7934376-7934450:1:exon

position:7934376:1
position: 7934376
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7934450:1
position: 7934450
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:7934527-7934664:1:exon

position:7934527:1
position: 7934527
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7934664:1
position: 7934664
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:7934738-7934814:1:exon

position:7934738:1
position: 7934738
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7934814:1
position: 7934814
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:7936076-7936306:1:exon

position:7936076:1
position: 7936076
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7936306:1
position: 7936306
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:7936905-7937200:1:exon

position:7936905:1
position: 7936905
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7937200:1
position: 7937200
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:7941387-7941505:1:exon

position:7941387:1
position: 7941387
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7941505:1
position: 7941505
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:7941775-7941982:1:exon

position:7941775:1
position: 7941775
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7941982:1
position: 7941982
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:7943454-7943559:1:exon

position:7943454:1
position: 7943454
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7943559:1
position: 7943559
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:7943902-7944027:1:exon

position:7943902:1
position: 7943902
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7944027:1
position: 7944027
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:7944218-7944841:1:exon

position:7944218:1
position: 7944218
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC119425664
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 451745
gene: LOC119425664
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: trafficking kinesin-binding protein 1
translation: MTKTYNDIDAVTRLLEEKERDLELAAKIGQSLLKKNRTLTEQNDYLEEQVGQITEEVAQLHHELNLKDELLQFYTNAAEEGDDEAGSSPTGKKSKAETGGFMSGTLQRKLKELEEENLSLRSEADHLKTETETYEEKEQQLVSDCVKELRLSSLQISAIAEELARKTEDASRQQEEVTRLLSQIVDLQKKAKSLAVENEELAQHLVAAKDAQRQLTAELQELGEKYAECIEMLHEAQQELKNLRNRNYAAGTPRRYHPLGLYPMDSLAAEIEGTMRKEMSLDDPECEEQKVHRKRVFETVKSVNKTVRQRSLTPTSSNIPGSNQSLSARTSPQSSGLSSPHSAIYGDFSGEGVPFDNRTQSILMEDRFTFCVVSNNSLDSREKKASGVEDLRLALRRLSLRRQNNLSERRFFEEERERRRGGQDALGQESVFTPSDSIMSLGNLHLWTSRGPYLPDKLQIVKPLEGSAILHQWQQLAQPHLGVILDARPGVVPKGYRPLELELEQVYPWGGFEEDEPGEQYFQNLPTSSAIASPAVVPASNAGVAHLGRPAACLAPPSPPSPSPSPHLSNTDGMAAYFPGKCMAHTSSTYTFTTCRILHPTDEQTRVTPSLNPVPASSSCVMTSSLLGTPAATPCTPRRLSLRPSESSTNLRDGTRTTSTSLGLVRLLQERGISAAMYHHSQGLEHNQGSGGVLLSTSIAPNLSHPDPLRPPTPPNSPTRPGASAVPTSAGFDFKSPSYDNFLASKPARSILKEVTRMRGRQRGRDCESQTDVSVTIHNLNLLDKVKRLGVAGAPRGRAGSSGPILGPLGGLHRSGSPFGPDGMRRNRSYPAMVGASMAMKAPGPQE
SIO_010081: LOC119425664
subclass of: SO_0000673
so part of: LOC119425664
location: join(7924600..7924650,7926655..7926771,7926854..7926954,7928009..7928108,7928184..7928262,7934173..7934303,7934376..7934450,7934527..7934664,7934738..7934814,7936076..7936306,7936905..7937200,7941387..7941505,7941775..7941982,7943454..7943559,7943902..7944027,7944218..7944806)
location: region:7924600-7944806:1
so has part: feature:7924600-7924650:1:exon
so has part: feature:7926655-7926771:1:exon
so has part: feature:7926854-7926954:1:exon
so has part: feature:7928009-7928108:1:exon
so has part: feature:7928184-7928262:1:exon
so has part: feature:7934173-7934303:1:exon
so has part: feature:7934376-7934450:1:exon
so has part: feature:7934527-7934664:1:exon
so has part: feature:7934738-7934814:1:exon
so has part: feature:7936076-7936306:1:exon
so has part: feature:7936905-7937200:1:exon
so has part: feature:7941387-7941505:1:exon
so has part: feature:7941775-7941982:1:exon
so has part: feature:7943454-7943559:1:exon
so has part: feature:7943902-7944027:1:exon
so has part: feature:7944218-7944806:1:exon

XP_037549134.1
type: Protein
SIO_000068: ncbiprotein

position:7924600:1
position: 7924600
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7944806:1
position: 7944806
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7924600-7924650:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7926655-7926771:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7926854-7926954:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7928009-7928108:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:7928184-7928262:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:7934173-7934303:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:7934376-7934450:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:7934527-7934664:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:7934738-7934814:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:7936076-7936306:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:7936905-7937200:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:7941387-7941505:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:7941775-7941982:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:7943454-7943559:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:7943902-7944027:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:7944218-7944806:1:exon

LOC119425684
type: Gene
subclass of: SO_0000704
RO_0002162: 451745
gene: LOC119425684
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 7980012..8614389
location: region:7980012-8614389:1
so has part: feature:7980012-8614389:1:exon
subclass of: SO_0000010

119425684
type: Gene
SIO_000068: ncbigene

position:7980012:1
position: 7980012
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8614389:1
position: 8614389
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7980012-8614389:1:exon

LOC119425684
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 451745
gene: LOC119425684
product: growth factor receptor-bound protein 10
inference: similar to RNA sequence (same species):INSD:GELZ01032922.1
exception: annotated by transcript or proteomic data
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: added 317 bases not found in genome assembly; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 96% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_037693228.1
SIO_010081: LOC119425684
subclass of: SO_0000673
so part of: LOC119425684
location: join(7980012..7980243,8527637..8527740,8544233..8544326,8564523..8564766,8570382..>8570505,8592353..8592427,8595451..8595588,8595732..8595842,8597696..8597794,8597904..8597981,8601508..8601624,<8610220..8610242,8610352..8610439,8610674..8610767,8614040..8614389)
location: region:7980012-8614389:1
so has part: feature:7980012-7980243:1:exon
so has part: feature:8527637-8527740:1:exon
so has part: feature:8544233-8544326:1:exon
so has part: feature:8564523-8564766:1:exon
so has part: feature:8570382-8570505:1:exon
so has part: feature:8592353-8592427:1:exon
so has part: feature:8595451-8595588:1:exon
so has part: feature:8595732-8595842:1:exon
so has part: feature:8597696-8597794:1:exon
so has part: feature:8597904-8597981:1:exon
so has part: feature:8601508-8601624:1:exon
so has part: feature:8610220-8610242:1:exon
so has part: feature:8610352-8610439:1:exon
so has part: feature:8610674-8610767:1:exon
so has part: feature:8614040-8614389:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:7980012-7980243:1:exon

position:7980243:1
position: 7980243
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:8527637-8527740:1:exon

position:8527637:1
position: 8527637
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8527740:1
position: 8527740
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:8544233-8544326:1:exon

position:8544233:1
position: 8544233
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8544326:1
position: 8544326
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:8564523-8564766:1:exon

position:8564523:1
position: 8564523
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8564766:1
position: 8564766
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:8570382-8570505:1:exon

position:8570382:1
position: 8570382
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8570505:1
position: 8570505
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 6
SIO_000628: feature:8592353-8592427:1:exon

position:8592353:1
position: 8592353
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8592427:1
position: 8592427
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:8595451-8595588:1:exon

position:8595451:1
position: 8595451
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8595588:1
position: 8595588
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:8595732-8595842:1:exon

position:8595732:1
position: 8595732
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8595842:1
position: 8595842
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:8597696-8597794:1:exon

position:8597696:1
position: 8597696
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8597794:1
position: 8597794
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:8597904-8597981:1:exon

position:8597904:1
position: 8597904
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8597981:1
position: 8597981
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:8601508-8601624:1:exon

position:8601508:1
position: 8601508
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8601624:1
position: 8601624
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:8610220-8610242:1:exon

position:8610220:1
position: 8610220
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

position:8610242:1
position: 8610242
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:8610352-8610439:1:exon

position:8610352:1
position: 8610352
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8610439:1
position: 8610439
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:8610674-8610767:1:exon

position:8610674:1
position: 8610674
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8610767:1
position: 8610767
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:8614040-8614389:1:exon

position:8614040:1
position: 8614040
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC119425689
type: Gene
subclass of: SO_0000704
RO_0002162: 451745
gene: LOC119425689
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(7985134..7988821)
location: region:7985134-7988821:-1
so has part: feature:7985134-7988821:-1:exon
subclass of: SO_0000010

119425689
type: Gene
SIO_000068: ncbigene

position:7985134:-1
position: 7985134
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7988821:-1
position: 7988821
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7985134-7988821:-1:exon

LOC119425689
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 451745
gene: LOC119425689
product: cholecystokinin
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 42 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_037693233.1
SIO_010081: LOC119425689
subclass of: SO_0000673
so part of: LOC119425689
location: complement(join(7985134..7985326,7987938..7988090,7988165..7988279,7988767..7988821))
location: region:7985134-7988821:-1
so has part: feature:7988767-7988821:-1:exon
so has part: feature:7988165-7988279:-1:exon
so has part: feature:7987938-7988090:-1:exon
so has part: feature:7985134-7985326:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:7988767-7988821:-1:exon

position:7988767:-1
position: 7988767
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:7988165-7988279:-1:exon

position:7988165:-1
position: 7988165
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7988279:-1
position: 7988279
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:7987938-7988090:-1:exon

position:7987938:-1
position: 7987938
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7988090:-1
position: 7988090
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:7985134-7985326:-1:exon

position:7985326:-1
position: 7985326
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC119425689
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 451745
gene: LOC119425689
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cholecystokinin
translation: MTVGLCVVLAVLCSSCLGLPFSSQPLAEGQRSLSAPSEAVLEADTHSLGEHLRHSRSNPQLKALPLNEDNADSRANLSELLARLISSRKGSVRRNSMANSRGGGLTSSHRIADRDYLGWMDFGRRSAEEYEYSS
SIO_010081: LOC119425689
subclass of: SO_0000673
so part of: LOC119425689
location: complement(join(7985190..7985326,7987938..7988090,7988165..7988279))
location: region:7985190-7988279:-1
so has part: feature:7988165-7988279:-1:exon
so has part: feature:7987938-7988090:-1:exon
so has part: feature:7985190-7985326:-1:exon

XP_037549161.1
type: Protein
SIO_000068: ncbiprotein

position:7985190:-1
position: 7985190
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7988165-7988279:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7987938-7988090:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7985190-7985326:-1:exon

trim71
type: Gene
subclass of: SO_0000704
RO_0002162: 451745
gene: trim71
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(8106072..8156198)
location: region:8106072-8156198:-1
so has part: feature:8106072-8156198:-1:exon
subclass of: SO_0000010