Nematolebias whitei isolate Nwh7 chromosome 16, NemWhi1, whole genome shotgun sequence.
type: Entry
definition: Nematolebias whitei isolate Nwh7 chromosome 16, NemWhi1, whole genome shotgun sequence.
sequence version: NC_056513.1
sequence date: 2021-07-29
sequence: sequence
division: CON
label: NC_056513.1
type: RefSeq
SIO_000068: refseq
dblink: PRJNA678356
dblink: SAMN12588121
keyword: WGS
keyword: RefSeq
source: Nematolebias whitei (Rio pearlfish)
organism: Nematolebias whitei
taxonomy: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Atherinomorphae; Cyprinodontiformes; Rivulidae; Nematolebias.
comment: REFSEQ INFORMATION: The reference sequence is identical to\nCM029748.1.\nAssembly name: NemWhi1\nThe genomic sequence for this RefSeq record is from the\nwhole-genome assembly released by the Michigan State University on\n2020/10/22. The original whole-genome shotgun project has the\naccession JAAMPK000000000.1.\n\n##Genome-Assembly-Data-START##\nAssembly Provider :: Michigan State University\nAssembly Method :: SuperNova, Chicago, HiC v. April 2020\nAssembly Name :: NemWhi1\nGenome Representation :: Full\nExpected Final Version :: Yes\nGenome Coverage :: 53.63x\nSequencing Technology :: Illumina\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI\nAnnotation Status :: Updated annotation\nAnnotation Name :: Nematolebias whitei Updated\n Annotation Release 100.20210725\nAnnotation Version :: 100.20210725\nAnnotation Pipeline :: NCBI eukaryotic genome annotation\n pipeline\nAnnotation Software Version :: 9.0\nAnnotation Method :: Best-placed RefSeq; propagated\n RefSeq model\nFeatures Annotated :: Gene; mRNA; CDS; ncRNA\n##Genome-Annotation-Data-END##

sequence
subclass of: SO_0000340
sequence length: 46051886
topology: linear
so has quality: SO_0000987
location: 1..46051886
location: region:1-46051886:1
RO_0002162: 451745

NC_056513
type: RefSeq
SIO_000068: refseq

PRJNA678356
type: BioProject
SIO_000068: bioproject

SAMN12588121
type: BioSample
SIO_000068: biosample

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:46051886:1
position: 46051886
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-46051886:1:source
so part of: sequence
organism: Nematolebias whitei
mol type: genomic DNA
isolate: Nwh7
chromosome: 16
sex: female
tissue type: liver
dev stage: adult
country: Brazil: Barra de Sao Joao

451745
type: Taxonomy
SIO_000068: taxonomy

LOC119422637
type: Gene
subclass of: SO_0000704
RO_0002162: 451745
gene: LOC119422637
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: <4540..5260
location: region:4540-5260:1
so has part: feature:4540-5260:1:exon
subclass of: SO_0000010

119422637
type: Gene
SIO_000068: ncbigene

position:4540:1
position: 4540
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

position:5260:1
position: 5260
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4540-5260:1:exon

LOC119422637
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 451745
gene: LOC119422637
product: REST corepressor 3
inference: similar to RNA sequence (same species):INSD:GELZ01035746.1
exception: annotated by transcript or proteomic data
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: added 475 bases not found in genome assembly; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_037690022.1
SIO_010081: LOC119422637
subclass of: SO_0000673
so part of: LOC119422637
location: <4540..5260
location: region:4540-5260:1
so has part: feature:4540-5260:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4540-5260:1:exon

LOC119422637
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 451745
gene: LOC119422637
inference: similar to RNA sequence (same species):INSD:GELZ01035746.1
exception: annotated by transcript or proteomic data
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: added 408 bases not found in genome assembly; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: REST corepressor 3
translation: MELVSLKRQVQNAKQMNSGLKHMLESGIEEFKLTESNQKVNARWTTDEQLLAVQGVRKYGKDFQAIADVIGNKTIGQVKNFFVNYRRRFNLEEVLQEWEAEQGTQASNGDGATSGEEGKISSTTPSGKSTDEEDDEGQVTSSGASPAASSSSAHVPVTSNSSSLHQPPPLLRPSLPATPSLHRQPPPLQQQARFLQPRPTLQQPPPLIRPSNPMPPRLNPRPAPMNLGGNPGVLGPNSTQQSSGPAAHQSDTASSSTH
SIO_010081: LOC119422637
subclass of: SO_0000673
so part of: LOC119422637
location: <4540..4908
location: region:4540-4908:1
so has part: feature:4540-4908:1:exon

XP_037545950.1
type: Protein
SIO_000068: ncbiprotein

position:4908:1
position: 4908
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4540-4908:1:exon

rcor3
type: Gene
subclass of: SO_0000704
RO_0002162: 451745
gene: rcor3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(21587..85746)
location: region:21587-85746:-1
so has part: feature:21587-85746:-1:exon
subclass of: SO_0000010

119422986
type: Gene
SIO_000068: ncbigene

position:21587:-1
position: 21587
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:85746:-1
position: 85746
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:21587-85746:-1:exon

rcor3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 451745
gene: rcor3
product: REST corepressor 3
inference: similar to RNA sequence (same species):INSD:GELZ01035744.1
exception: annotated by transcript or proteomic data
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: added 162 bases not found in genome assembly; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 93% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_037690397.1
SIO_010081: rcor3
subclass of: SO_0000673
so part of: rcor3
location: complement(join(21587..21609,21749..21806,22281..22358,26261..26476,30509..30587,38790..>38914,71770..71822,71893..71970,85356..85412,85507..85746))
location: region:21587-85746:-1
so has part: feature:85507-85746:-1:exon
so has part: feature:85356-85412:-1:exon
so has part: feature:71893-71970:-1:exon
so has part: feature:71770-71822:-1:exon
so has part: feature:38790-38914:-1:exon
so has part: feature:30509-30587:-1:exon
so has part: feature:26261-26476:-1:exon
so has part: feature:22281-22358:-1:exon
so has part: feature:21749-21806:-1:exon
so has part: feature:21587-21609:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:85507-85746:-1:exon

position:85507:-1
position: 85507
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:85356-85412:-1:exon

position:85356:-1
position: 85356
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:85412:-1
position: 85412
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:71893-71970:-1:exon

position:71893:-1
position: 71893
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:71970:-1
position: 71970
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:71770-71822:-1:exon

position:71770:-1
position: 71770
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:71822:-1
position: 71822
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:38790-38914:-1:exon

position:38790:-1
position: 38790
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:38914:-1
position: 38914
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 6
SIO_000628: feature:30509-30587:-1:exon

position:30509:-1
position: 30509
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:30587:-1
position: 30587
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:26261-26476:-1:exon

position:26261:-1
position: 26261
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:26476:-1
position: 26476
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:22281-22358:-1:exon

position:22281:-1
position: 22281
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:22358:-1
position: 22358
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:21749-21806:-1:exon

position:21749:-1
position: 21749
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:21806:-1
position: 21806
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:21587-21609:-1:exon

position:21609:-1
position: 21609
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

rcor3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 451745
gene: rcor3
inference: similar to RNA sequence (same species):INSD:GELZ01035744.1
exception: annotated by transcript or proteomic data
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: added 162 bases not found in genome assembly; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: REST corepressor 3
translation: MPGMMDKGSEYLGKGRSNGTKSPSNASNGHFSDESGSDDEHDVGMRVGADYQANIPEFDPVSTKYPEKDSGGMLVWSPYHSIVDAKLDEYISIAKEKHGYNLEQALGMLFWHKHNIEKSLADLPNFTPFPDEWTVEDKVLFEQAFSFHGKSFHRIQQMLPDKSISSLVKYYYSWKKTRSRTSLMDRQARKLATRSNQDDSDEEMEDAIPIEANDSDYDPNKEAKKENQTESPVPGTKLALGRREHQTLQHRHHQRSRCRPPKGMYLTQEDVVAVSCSASAANTLLRQLDMELVSLKRQVQNAKQMNSGLKHMLESGIEEFKLTESNQKVNARWTTDEQLLAVQAFYGSGS
SIO_010081: rcor3
subclass of: SO_0000673
so part of: rcor3
location: complement(join(21587..21609,21749..21806,22281..22358,26261..26476,30509..30587,38790..>38914,71770..71822,71893..71970,85356..85412,85507..85630))
location: region:21587-85630:-1
so has part: feature:85507-85630:-1:exon
so has part: feature:85356-85412:-1:exon
so has part: feature:71893-71970:-1:exon
so has part: feature:71770-71822:-1:exon
so has part: feature:38790-38914:-1:exon
so has part: feature:30509-30587:-1:exon
so has part: feature:26261-26476:-1:exon
so has part: feature:22281-22358:-1:exon
so has part: feature:21749-21806:-1:exon
so has part: feature:21587-21609:-1:exon

XP_037546325.1
type: Protein
SIO_000068: ncbiprotein

position:85630:-1
position: 85630
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:85507-85630:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:85356-85412:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:71893-71970:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:71770-71822:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:38790-38914:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:30509-30587:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:26261-26476:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:22281-22358:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:21749-21806:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:21587-21609:-1:exon

LOC119422987
type: Gene
subclass of: SO_0000704
RO_0002162: 451745
gene: LOC119422987
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 86924..156158
location: region:86924-156158:1
so has part: feature:86924-156158:1:exon
subclass of: SO_0000010

119422987
type: Gene
SIO_000068: ncbigene

position:86924:1
position: 86924
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:156158:1
position: 156158
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:86924-156158:1:exon

LOC119422987
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 451745
gene: LOC119422987
product: potassium voltage-gated channel subfamily H member 1-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 40% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_037690398.1
SIO_010081: LOC119422987
subclass of: SO_0000673
so part of: LOC119422987
location: join(86924..87013,95043..95166,95438..95544,95753..95881,108220..108338,121513..121905,124543..124972,134564..134763,155094..155280,156154..156158)
location: region:86924-156158:1
so has part: feature:86924-87013:1:exon
so has part: feature:95043-95166:1:exon
so has part: feature:95438-95544:1:exon
so has part: feature:95753-95881:1:exon
so has part: feature:108220-108338:1:exon
so has part: feature:121513-121905:1:exon
so has part: feature:124543-124972:1:exon
so has part: feature:134564-134763:1:exon
so has part: feature:155094-155280:1:exon
so has part: feature:156154-156158:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:86924-87013:1:exon

position:87013:1
position: 87013
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:95043-95166:1:exon

position:95043:1
position: 95043
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:95166:1
position: 95166
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:95438-95544:1:exon

position:95438:1
position: 95438
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:95544:1
position: 95544
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:95753-95881:1:exon

position:95753:1
position: 95753
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:95881:1
position: 95881
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:108220-108338:1:exon

position:108220:1
position: 108220
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:108338:1
position: 108338
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:121513-121905:1:exon

position:121513:1
position: 121513
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:121905:1
position: 121905
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:124543-124972:1:exon

position:124543:1
position: 124543
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:124972:1
position: 124972
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:134564-134763:1:exon

position:134564:1
position: 134564
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:134763:1
position: 134763
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:155094-155280:1:exon

position:155094:1
position: 155094
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:155280:1
position: 155280
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:156154-156158:1:exon

position:156154:1
position: 156154
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC119422987
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 451745
gene: LOC119422987
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: potassium voltage-gated channel subfamily H member 1-like
translation: MAGGRRGLVAPQNTFLENIVRRSNDSNFVLGNAQIVDWPVVYSNDGFCKLSGYHRAEVMQKSSTCSFMYGELTDKETSEKVRQTFENYEMKSFEILMYKKNKMPVWFFVKIAPIRNEQDKVVLFLCTFNDITAFKQPIEDESSKGWGKFARLTRALTSSRGVLQQLAPAVHKGENVHKHSRLAEVLQLGSEILPQYKQETPKTPPHIILHYCLFKTTWDWVILILTFYTAIMVPYNVSFKTKQNNVTWLVVDSIVDVIFLVDIVLNFHTTFVGPAGEVISDPKLICMNYVKTWFVIDLLSCLPYDVINAFENVDEGISSLFSSLKVVRLLRLGRVARKLDHYIEYGAAVLVLLVCVFGLAAHWLACIWYSIGDYEVIDEDTNNVRLDSWLYLLGEAVGTPYRFNISGSSRWEGGPSKDSVYITSLYFTMTSLTSIGFGNIAPNTDGEKIFAVAMMMIGSLLYATIFGNVTTIFQQMYANTNHYHEMLNSVRDFLKLYQVPKGLRERVMDYIVSTWSMTRGINTDEIVFRKISDVKREEEEKLKRKDEAPLNLPPDHPVRRLFQRFRQQREARLAAERVSQSLGDVEKG
SIO_010081: LOC119422987
subclass of: SO_0000673
so part of: LOC119422987
location: join(86941..87013,95043..95166,95438..95544,95753..95881,108220..108338,121513..121905,124543..124972,134564..134763,155094..155280,156154..156158)
location: region:86941-156158:1
so has part: feature:86941-87013:1:exon
so has part: feature:95043-95166:1:exon
so has part: feature:95438-95544:1:exon
so has part: feature:95753-95881:1:exon
so has part: feature:108220-108338:1:exon
so has part: feature:121513-121905:1:exon
so has part: feature:124543-124972:1:exon
so has part: feature:134564-134763:1:exon
so has part: feature:155094-155280:1:exon
so has part: feature:156154-156158:1:exon

XP_037546326.1
type: Protein
SIO_000068: ncbiprotein

position:86941:1
position: 86941
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:86941-87013:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:95043-95166:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:95438-95544:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:95753-95881:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:108220-108338:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:121513-121905:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:124543-124972:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:134564-134763:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:155094-155280:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:156154-156158:1:exon

LOC119422988
type: Gene
subclass of: SO_0000704
RO_0002162: 451745
gene: LOC119422988
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(232985..321341)
location: region:232985-321341:-1
so has part: feature:232985-321341:-1:exon
subclass of: SO_0000010

119422988
type: Gene
SIO_000068: ncbigene

position:232985:-1
position: 232985
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:321341:-1
position: 321341
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:232985-321341:-1:exon

LOC119422988
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 451745
gene: LOC119422988
product: palmitoyltransferase ZDHHC5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 17 Proteins, and 78% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_037690399.1
SIO_010081: LOC119422988
subclass of: SO_0000673
so part of: LOC119422988
location: complement(join(232985..233924,238720..238780,249262..249274,249346..249364,249913..250036,250148..250256,255283..255409,255772..255863,258042..258144,282222..282394,301626..301783,311921..312042,321178..321341))
location: region:232985-321341:-1
so has part: feature:321178-321341:-1:exon
so has part: feature:311921-312042:-1:exon
so has part: feature:301626-301783:-1:exon
so has part: feature:282222-282394:-1:exon
so has part: feature:258042-258144:-1:exon
so has part: feature:255772-255863:-1:exon
so has part: feature:255283-255409:-1:exon
so has part: feature:250148-250256:-1:exon
so has part: feature:249913-250036:-1:exon
so has part: feature:249346-249364:-1:exon
so has part: feature:249262-249274:-1:exon
so has part: feature:238720-238780:-1:exon
so has part: feature:232985-233924:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:321178-321341:-1:exon

position:321178:-1
position: 321178
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:311921-312042:-1:exon

position:311921:-1
position: 311921
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:312042:-1
position: 312042
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:301626-301783:-1:exon

position:301626:-1
position: 301626
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:301783:-1
position: 301783
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:282222-282394:-1:exon

position:282222:-1
position: 282222
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:282394:-1
position: 282394
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:258042-258144:-1:exon

position:258042:-1
position: 258042
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:258144:-1
position: 258144
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:255772-255863:-1:exon

position:255772:-1
position: 255772
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:255863:-1
position: 255863
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:255283-255409:-1:exon

position:255283:-1
position: 255283
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:255409:-1
position: 255409
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:250148-250256:-1:exon

position:250148:-1
position: 250148
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:250256:-1
position: 250256
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:249913-250036:-1:exon

position:249913:-1
position: 249913
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:250036:-1
position: 250036
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:249346-249364:-1:exon

position:249346:-1
position: 249346
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:249364:-1
position: 249364
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:249262-249274:-1:exon

position:249262:-1
position: 249262
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:249274:-1
position: 249274
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:238720-238780:-1:exon

position:238720:-1
position: 238720
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:238780:-1
position: 238780
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:232985-233924:-1:exon

position:233924:-1
position: 233924
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC119422988
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 451745
gene: LOC119422988
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: palmitoyltransferase ZDHHC5
translation: MPGSNSKGGGRGTSSSPLPHAVVLPSRSLRPSRYVPVSAATFFLVGSTTLFFCFTCPWLSERFSLAVPIYNGVIFLFVLANFCMATFMDPGIFPRAEEDEDKEDDFRAPLYKTVEIRGIQVRMKWCSTCRFYRPPRCSHCSVCDNCVEEFDHHCPWVNNCIGKRNYRYFFLFLLSLTAHIMAVFGFGLLFILYHRQNIDRLHAIITLAVMCVAGMFFVPVAGLTGFHVVLVARGRTTNEQVTGKFRGGVNPFTNGCWKNVSHVLCSSQAPRYLSRKKNGQSVSVQPPFLQLQLTEAHLASKVLDNGIQGDLHRSKSSLEMMESQSCDVEPPPPPKPELRYPGMTRRNPEDCSLLNKAPPTPTMYKYRPTYSPGKNHTTLTHAYANQVTHSQSLRESSLVSIGAGGGGGGGGEMGGGAIQGPKDKPILIQPLGQTNSSQSSSSSCSAPSTPTHQVSAPARLGRAHLNTPMIPSPIYKPRNGKVKKVMGVGGTTYEISV
SIO_010081: LOC119422988
subclass of: SO_0000673
so part of: LOC119422988
location: complement(join(233696..233924,238720..238780,249262..249274,249346..249364,249913..250036,250148..250256,255283..255409,255772..255863,258042..258144,282222..282394,301626..301783,311921..312042,321178..321341))
location: region:233696-321341:-1
so has part: feature:321178-321341:-1:exon
so has part: feature:311921-312042:-1:exon
so has part: feature:301626-301783:-1:exon
so has part: feature:282222-282394:-1:exon
so has part: feature:258042-258144:-1:exon
so has part: feature:255772-255863:-1:exon
so has part: feature:255283-255409:-1:exon
so has part: feature:250148-250256:-1:exon
so has part: feature:249913-250036:-1:exon
so has part: feature:249346-249364:-1:exon
so has part: feature:249262-249274:-1:exon
so has part: feature:238720-238780:-1:exon
so has part: feature:233696-233924:-1:exon

XP_037546327.1
type: Protein
SIO_000068: ncbiprotein

position:233696:-1
position: 233696
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:321178-321341:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:311921-312042:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:301626-301783:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:282222-282394:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:258042-258144:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:255772-255863:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:255283-255409:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:250148-250256:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:249913-250036:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:249346-249364:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:249262-249274:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:238720-238780:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:233696-233924:-1:exon

LOC119422990
type: Gene
subclass of: SO_0000704
RO_0002162: 451745
gene: LOC119422990
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(349568..471626)
location: region:349568-471626:-1
so has part: feature:349568-471626:-1:exon
subclass of: SO_0000010

119422990
type: Gene
SIO_000068: ncbigene

position:349568:-1
position: 349568
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:471626:-1
position: 471626
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:349568-471626:-1:exon

LOC119422990
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 451745
gene: LOC119422990
product: large neutral amino acids transporter small subunit 3-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 51% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_037690400.1
SIO_010081: LOC119422990
subclass of: SO_0000673
so part of: LOC119422990
location: complement(join(349568..349738,350239..350362,371462..371535,387709..387838,388108..388240,400160..400195,400364..400504,403591..403633,426020..426048,443261..443274,444561..444757,445217..445309,456856..456932,457280..457335,460288..460468,471473..471626))
location: region:349568-471626:-1
so has part: feature:471473-471626:-1:exon
so has part: feature:460288-460468:-1:exon
so has part: feature:457280-457335:-1:exon
so has part: feature:456856-456932:-1:exon
so has part: feature:445217-445309:-1:exon
so has part: feature:444561-444757:-1:exon
so has part: feature:443261-443274:-1:exon
so has part: feature:426020-426048:-1:exon
so has part: feature:403591-403633:-1:exon
so has part: feature:400364-400504:-1:exon
so has part: feature:400160-400195:-1:exon
so has part: feature:388108-388240:-1:exon
so has part: feature:387709-387838:-1:exon
so has part: feature:371462-371535:-1:exon
so has part: feature:350239-350362:-1:exon
so has part: feature:349568-349738:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:471473-471626:-1:exon

position:471473:-1
position: 471473
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:460288-460468:-1:exon

position:460288:-1
position: 460288
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:460468:-1
position: 460468
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:457280-457335:-1:exon

position:457280:-1
position: 457280
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:457335:-1
position: 457335
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:456856-456932:-1:exon

position:456856:-1
position: 456856
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:456932:-1
position: 456932
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:445217-445309:-1:exon

position:445217:-1
position: 445217
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:445309:-1
position: 445309
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:444561-444757:-1:exon

position:444561:-1
position: 444561
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:444757:-1
position: 444757
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:443261-443274:-1:exon

position:443261:-1
position: 443261
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:443274:-1
position: 443274
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:426020-426048:-1:exon

position:426020:-1
position: 426020
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:426048:-1
position: 426048
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:403591-403633:-1:exon

position:403591:-1
position: 403591
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:403633:-1
position: 403633
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:400364-400504:-1:exon

position:400364:-1
position: 400364
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:400504:-1
position: 400504
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:400160-400195:-1:exon

position:400160:-1
position: 400160
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:400195:-1
position: 400195
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:388108-388240:-1:exon

position:388108:-1
position: 388108
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:388240:-1
position: 388240
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:387709-387838:-1:exon

position:387709:-1
position: 387709
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:387838:-1
position: 387838
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:371462-371535:-1:exon

position:371462:-1
position: 371462
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:371535:-1
position: 371535
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:350239-350362:-1:exon

position:350239:-1
position: 350239
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:350362:-1
position: 350362
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:349568-349738:-1:exon

position:349738:-1
position: 349738
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC119422990
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 451745
gene: LOC119422990
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: large neutral amino acids transporter small subunit 3-like
translation: MIPSLAQAYRRRWWLAITAIMENLLFSAVLLGWASLLIMLKNEGFYAHLCIENATDSNWTSVERSGWRSCVEQDEMLNLGFTIGSFLLSAATLPLGILMDRYGPRPIRLIGSSCFVASCAMIAAATYNPEELSILIFFAVSFNGFGGICLTFTSLTLPNMFGNLRSTILSLMIGSYASSAVTFLGVKLIYHLGVSFRVIMWVWTGMACLVFLNCFLNWPGEPFSGPEDIDHMSVPPLNPLKLGTDAMLANMVLRDEQELKTAPQTEEKPQVACDSQSPPPFVPLSHSICSPVFLWSVLAMAITQLRLIFFMGAMNKMLEFLVTHGDPHPSEELQTEVEEQVGFYSSVFGAMQLLCLVTCPLIGYIMDWRMKECDEEYPNMQTSKSQPGTPKRDRTIQKLTNAIRAFIFTNLLLVFFGIISLIDNLPIQVVSFVLHTVVRGFIHSCCGGLYAAVYPANHFGTLTGFQSTISAAFALLQQLLFILMVGHLRGDPYWINVGLLIFSMTGFLLPIYLFYHRRNLIRENAHEDLIAEQTKIDNFPLTQTPNGQTF
SIO_010081: LOC119422990
subclass of: SO_0000673
so part of: LOC119422990
location: complement(join(349568..349738,350239..350362,371462..371535,387709..387838,388108..388240,400160..400195,400364..400504,403591..403633,426020..426048,443261..443274,444561..444757,445217..445309,456856..456932,457280..457335,460288..460468,471473..471626))
location: region:349568-471626:-1
so has part: feature:471473-471626:-1:exon
so has part: feature:460288-460468:-1:exon
so has part: feature:457280-457335:-1:exon
so has part: feature:456856-456932:-1:exon
so has part: feature:445217-445309:-1:exon
so has part: feature:444561-444757:-1:exon
so has part: feature:443261-443274:-1:exon
so has part: feature:426020-426048:-1:exon
so has part: feature:403591-403633:-1:exon
so has part: feature:400364-400504:-1:exon
so has part: feature:400160-400195:-1:exon
so has part: feature:388108-388240:-1:exon
so has part: feature:387709-387838:-1:exon
so has part: feature:371462-371535:-1:exon
so has part: feature:350239-350362:-1:exon
so has part: feature:349568-349738:-1:exon

XP_037546328.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:471473-471626:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:460288-460468:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:457280-457335:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:456856-456932:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:445217-445309:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:444561-444757:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:443261-443274:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:426020-426048:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:403591-403633:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:400364-400504:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:400160-400195:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:388108-388240:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:387709-387838:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:371462-371535:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:350239-350362:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:349568-349738:-1:exon

LOC119423235
type: Gene
subclass of: SO_0000704
RO_0002162: 451745
gene: LOC119423235
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(422063..423125)
location: region:422063-423125:-1
so has part: feature:422063-423125:-1:exon
subclass of: SO_0000011

119423235
type: Gene
SIO_000068: ncbigene

position:422063:-1
position: 422063
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:423125:-1
position: 423125
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:422063-423125:-1:exon

LOC119423235
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 451745
nc RNA class: lncRNA
gene: LOC119423235
product: uncharacterized LOC119423235
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XR_005187449.1
SIO_010081: LOC119423235
subclass of: SO_0000673
so part of: LOC119423235
location: complement(join(422063..422418,422880..422959,423040..423125))
location: region:422063-423125:-1
so has part: feature:423040-423125:-1:exon
so has part: feature:422880-422959:-1:exon
so has part: feature:422063-422418:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:423040-423125:-1:exon

position:423040:-1
position: 423040
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:422880-422959:-1:exon

position:422880:-1
position: 422880
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:422959:-1
position: 422959
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:422063-422418:-1:exon

position:422418:-1
position: 422418
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

spcs3
type: Gene
subclass of: SO_0000704
RO_0002162: 451745
gene: spcs3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(480274..499977)
location: region:480274-499977:-1
so has part: feature:480274-499977:-1:exon
subclass of: SO_0000010

119422638
type: Gene
SIO_000068: ncbigene

position:480274:-1
position: 480274
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:499977:-1
position: 499977
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:480274-499977:-1:exon

spcs3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 451745
gene: spcs3
product: signal peptidase complex subunit 3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 14 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_037690023.1
SIO_010081: spcs3
subclass of: SO_0000673
so part of: spcs3
location: complement(join(480274..480469,490798..490913,494425..494501,497541..497614,499775..499977))
location: region:480274-499977:-1
so has part: feature:499775-499977:-1:exon
so has part: feature:497541-497614:-1:exon
so has part: feature:494425-494501:-1:exon
so has part: feature:490798-490913:-1:exon
so has part: feature:480274-480469:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:499775-499977:-1:exon

position:499775:-1
position: 499775
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:497541-497614:-1:exon

position:497541:-1
position: 497541
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:497614:-1
position: 497614
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:494425-494501:-1:exon

position:494425:-1
position: 494425
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:494501:-1
position: 494501
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:490798-490913:-1:exon

position:490798:-1
position: 490798
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:490913:-1
position: 490913
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:480274-480469:-1:exon

position:480469:-1
position: 480469
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

spcs3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 451745
gene: spcs3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: signal peptidase complex subunit 3
translation: MNTVLSRANSLFAFSLSVMAALTFGCFVTTAFKDRRVPVDIHLSKVMLKNVDDFTGPRERSDLGFITFDISADLEPIFDWNVKQLFLYLSAEYATKSNSLNQVVLWDKIVLRGENTILNFRDMKSKYFFFDDGNGLRANKNITLTLSWNVVPNAGILPLVAGSGHVSLPFPETYETTKSY
SIO_010081: spcs3
subclass of: SO_0000673
so part of: spcs3
location: complement(join(480337..480469,490798..490913,494425..494501,497541..497614,499775..499917))
location: region:480337-499917:-1
so has part: feature:499775-499917:-1:exon
so has part: feature:497541-497614:-1:exon
so has part: feature:494425-494501:-1:exon
so has part: feature:490798-490913:-1:exon
so has part: feature:480337-480469:-1:exon

XP_037545951.1
type: Protein
SIO_000068: ncbiprotein

position:480337:-1
position: 480337
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:499917:-1
position: 499917
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:499775-499917:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:497541-497614:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:494425-494501:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:490798-490913:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:480337-480469:-1:exon

LOC119422991
type: Gene
subclass of: SO_0000704
RO_0002162: 451745
gene: LOC119422991
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 510508..548287
location: region:510508-548287:1
so has part: feature:510508-548287:1:exon
subclass of: SO_0000010

119422991
type: Gene
SIO_000068: ncbigene

position:510508:1
position: 510508
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:548287:1
position: 548287
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:510508-548287:1:exon

LOC119422991
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 451745
gene: LOC119422991
product: ankyrin repeat and SOCS box protein 5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 67% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_037690401.1
SIO_010081: LOC119422991
subclass of: SO_0000673
so part of: LOC119422991
location: join(510508..510751,537923..538057,545904..546095,546177..546421,546619..546697,548251..548287)
location: region:510508-548287:1
so has part: feature:510508-510751:1:exon
so has part: feature:537923-538057:1:exon
so has part: feature:545904-546095:1:exon
so has part: feature:546177-546421:1:exon
so has part: feature:546619-546697:1:exon
so has part: feature:548251-548287:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:510508-510751:1:exon

position:510751:1
position: 510751
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:537923-538057:1:exon

position:537923:1
position: 537923
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:538057:1
position: 538057
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:545904-546095:1:exon

position:545904:1
position: 545904
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:546095:1
position: 546095
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:546177-546421:1:exon

position:546177:1
position: 546177
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:546421:1
position: 546421
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:546619-546697:1:exon

position:546619:1
position: 546619
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:546697:1
position: 546697
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:548251-548287:1:exon

position:548251:1
position: 548251
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC119422991
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 451745
gene: LOC119422991
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ankyrin repeat and SOCS box protein 5
translation: MRCGTLSWRRGTLEVWNPLMEMWDPRGVEPSHGDVGPSRCGTLSWRCGTLEVWNLLMETWYPLEVWNPLQMCDPHEARNTEGNSQCVDSLLSHGADPNHQAVHLGSPLYVSCVHQHTACSKVLLARGACVNVGQGDDSPLHAAVRQDSARQVSLLLNYGADVNLRDENAQRPMDLARPGERIQQLLAAFQVSPRSLCHLCRLQIRTVIGRDRLKLLPLLPLPSVLTQYLQQMQDDDWPTCSATLM
SIO_010081: LOC119422991
subclass of: SO_0000673
so part of: LOC119422991
location: join(510508..510751,537923..538057,545904..546095,546177..546343)
location: region:510508-546343:1
so has part: feature:510508-510751:1:exon
so has part: feature:537923-538057:1:exon
so has part: feature:545904-546095:1:exon
so has part: feature:546177-546343:1:exon

XP_037546329.1
type: Protein
SIO_000068: ncbiprotein

position:546343:1
position: 546343
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:510508-510751:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:537923-538057:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:545904-546095:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:546177-546343:1:exon

LOC119423236
type: Gene
subclass of: SO_0000704
RO_0002162: 451745
gene: LOC119423236
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(<567134..>575271)
location: region:567134-575271:-1
so has part: feature:567134-575271:-1:exon
subclass of: SO_0000010

119423236
type: Gene
SIO_000068: ncbigene

position:567134:-1
position: 567134
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

position:575271:-1
position: 575271
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:567134-575271:-1:exon

LOC119423236
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 451745
gene: LOC119423236
product: ankyrin repeat and SOCS box protein 5
inference: similar to RNA sequence (same species):INSD:GELZ01032904.1
exception: annotated by transcript or proteomic data
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: added 192 bases not found in genome assembly; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 92% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_037690641.1
SIO_010081: LOC119423236
subclass of: SO_0000673
so part of: LOC119423236
location: complement(join(<567134..567287,567364..567471,575192..>575271))
location: region:567134-575271:-1
so has part: feature:575192-575271:-1:exon
so has part: feature:567364-567471:-1:exon
so has part: feature:567134-567287:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:575192-575271:-1:exon

position:575192:-1
position: 575192
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:567364-567471:-1:exon

position:567364:-1
position: 567364
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:567471:-1
position: 567471
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:567134-567287:-1:exon

position:567287:-1
position: 567287
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC119423236
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 451745
gene: LOC119423236
inference: similar to RNA sequence (same species):INSD:GELZ01032904.1
exception: annotated by transcript or proteomic data
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: added 132 bases not found in genome assembly; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 3
product: ankyrin repeat and SOCS box protein 5
translation: MSRKRAAELVPLNPSGPERKRVCWGVLTSQGSWADRSPLHEAASQGRLLALRTLLTQGYYANVVTIDHVTPLHEACLSGHAACVRALISVGANVNAATIDGVTPLISCCTSGSVACLELLLQNGAHMHTHHTHFPSALHEACKRGNSQCVDSLLSHGA
SIO_010081: LOC119423236
subclass of: SO_0000673
so part of: LOC119423236
location: complement(join(<567134..567287,567364..567471,575192..>575271))
location: region:567134-575271:-1
so has part: feature:575192-575271:-1:exon
so has part: feature:567364-567471:-1:exon
so has part: feature:567134-567287:-1:exon

XP_037546569.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:575192-575271:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:567364-567471:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:567134-567287:-1:exon

galnt7
type: Gene
subclass of: SO_0000704
RO_0002162: 451745
gene: galnt7
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 614057..652560
location: region:614057-652560:1
so has part: feature:614057-652560:1:exon
subclass of: SO_0000010

119422992
type: Gene
SIO_000068: ncbigene

position:614057:1
position: 614057
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:652560:1
position: 652560
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:614057-652560:1:exon

galnt7
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 451745
gene: galnt7
product: UDP-N-acetyl-alpha-D-galactosamine: polypeptide N-acetylgalactosaminyltransferase 7
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 97% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_037690402.1
SIO_010081: galnt7
subclass of: SO_0000673
so part of: galnt7
location: join(614057..614109,615271..615437,616318..616448,617114..617193,622856..623038,625663..625780,625869..625991,629582..629697,639106..639208,639297..639395,643959..644084,644522..644552,651442..652560)
location: region:614057-652560:1
so has part: feature:614057-614109:1:exon
so has part: feature:615271-615437:1:exon
so has part: feature:616318-616448:1:exon
so has part: feature:617114-617193:1:exon
so has part: feature:622856-623038:1:exon
so has part: feature:625663-625780:1:exon
so has part: feature:625869-625991:1:exon
so has part: feature:629582-629697:1:exon
so has part: feature:639106-639208:1:exon
so has part: feature:639297-639395:1:exon
so has part: feature:643959-644084:1:exon
so has part: feature:644522-644552:1:exon
so has part: feature:651442-652560:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:614057-614109:1:exon

position:614109:1
position: 614109
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:615271-615437:1:exon

position:615271:1
position: 615271
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:615437:1
position: 615437
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:616318-616448:1:exon

position:616318:1
position: 616318
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:616448:1
position: 616448
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:617114-617193:1:exon

position:617114:1
position: 617114
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:617193:1
position: 617193
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:622856-623038:1:exon

position:622856:1
position: 622856
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:623038:1
position: 623038
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:625663-625780:1:exon

position:625663:1
position: 625663
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:625780:1
position: 625780
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:625869-625991:1:exon

position:625869:1
position: 625869
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:625991:1
position: 625991
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:629582-629697:1:exon

position:629582:1
position: 629582
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:629697:1
position: 629697
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:639106-639208:1:exon

position:639106:1
position: 639106
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:639208:1
position: 639208
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:639297-639395:1:exon

position:639297:1
position: 639297
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:639395:1
position: 639395
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:643959-644084:1:exon

position:643959:1
position: 643959
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:644084:1
position: 644084
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:644522-644552:1:exon

position:644522:1
position: 644522
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:644552:1
position: 644552
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:651442-652560:1:exon

position:651442:1
position: 651442
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

galnt7
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 451745
gene: galnt7
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: N-acetylgalactosaminyltransferase 7
translation: MQLCSTQRPWLSQEEHLECKFWNYDDRLLTSSVIIVFHNEGWSTLMRTVHSVIKRTPRQFLAEIVLIDDFSNKVHLKERLEEYIKQWNGLVKLFRNEKREGLIQARSIGAKKATKGQVLIYLDAHCEVGINWYAPLVAPISKDRTVCTVPLIDSIHGQRFDIEPQGGGDENGFARGAWDWSMLWKRVPLGDREKKLRKSETEPYRSPAMAGGLFAIERDFFFELGLYDPGLQIWGGENFEISYKIWQCGGQLLFVPCSRVGHIYRLQGWQGNPPPAHVGSSPTLKNYVRVVEVWWDDYKDYFYASRPETLTLAYGDISELKRFREEHRCKGFKWFMEEIAYDIPLHYPLPPKNVEWGEIRGFDTSYCIDSMGHTNGGNVEIGPCHRMGGNQLFRINEANQLMQYDQCLSRGDNSGVIITHCERNQNTEWNYFKDLHRFTHVPTGKCLDRSDLLHKVFISDCDISKSTQKWEMNNIIAV
SIO_010081: galnt7
subclass of: SO_0000673
so part of: galnt7
location: join(614057..614109,615271..615437,616318..616448,617114..617193,622856..623038,625663..625780,625869..625991,629582..629697,639106..639208,639297..639395,643959..644084,644522..644552,651442..651548)
location: region:614057-651548:1
so has part: feature:614057-614109:1:exon
so has part: feature:615271-615437:1:exon
so has part: feature:616318-616448:1:exon
so has part: feature:617114-617193:1:exon
so has part: feature:622856-623038:1:exon
so has part: feature:625663-625780:1:exon
so has part: feature:625869-625991:1:exon
so has part: feature:629582-629697:1:exon
so has part: feature:639106-639208:1:exon
so has part: feature:639297-639395:1:exon
so has part: feature:643959-644084:1:exon
so has part: feature:644522-644552:1:exon
so has part: feature:651442-651548:1:exon

XP_037546330.1
type: Protein
SIO_000068: ncbiprotein

position:651548:1
position: 651548
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:614057-614109:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:615271-615437:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:616318-616448:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:617114-617193:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:622856-623038:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:625663-625780:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:625869-625991:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:629582-629697:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:639106-639208:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:639297-639395:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:643959-644084:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:644522-644552:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:651442-651548:1:exon

saraf
type: Gene
subclass of: SO_0000704
RO_0002162: 451745
gene: saraf
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 656875..663437
location: region:656875-663437:1
so has part: feature:656875-663437:1:exon
subclass of: SO_0000010

119422640
type: Gene
SIO_000068: ncbigene

position:656875:1
position: 656875
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:663437:1
position: 663437
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:656875-663437:1:exon

saraf
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 451745
gene: saraf
product: store-operated calcium entry-associated regulatory factor, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_037690024.1
SIO_010081: saraf
subclass of: SO_0000673
so part of: saraf
location: join(656875..657063,658863..659044,660069..660252,660352..660615,662821..662971,663296..663437)
location: region:656875-663437:1
so has part: feature:656875-657063:1:exon
so has part: feature:658863-659044:1:exon
so has part: feature:660069-660252:1:exon
so has part: feature:660352-660615:1:exon
so has part: feature:662821-662971:1:exon
so has part: feature:663296-663437:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:656875-657063:1:exon

position:657063:1
position: 657063
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:658863-659044:1:exon

position:658863:1
position: 658863
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:659044:1
position: 659044
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:660069-660252:1:exon

position:660069:1
position: 660069
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:660252:1
position: 660252
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:660352-660615:1:exon

position:660352:1
position: 660352
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:660615:1
position: 660615
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:662821-662971:1:exon

position:662821:1
position: 662821
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:662971:1
position: 662971
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:663296-663437:1:exon

position:663296:1
position: 663296
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

saraf
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 451745
gene: saraf
product: store-operated calcium entry-associated regulatory factor, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_037690025.1
SIO_010081: saraf
subclass of: SO_0000673
so part of: saraf
location: join(656875..657063,658863..659044,660069..660252,660352..660615,662821..662971,663074..663138,663296..663395)
location: region:656875-663395:1
so has part: feature:656875-657063:1:exon
so has part: feature:658863-659044:1:exon
so has part: feature:660069-660252:1:exon
so has part: feature:660352-660615:1:exon
so has part: feature:662821-662971:1:exon
so has part: feature:663074-663138:1:exon
so has part: feature:663296-663395:1:exon

position:663395:1
position: 663395
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:656875-657063:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:658863-659044:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:660069-660252:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:660352-660615:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:662821-662971:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:663074-663138:1:exon

position:663074:1
position: 663074
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:663138:1
position: 663138
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:663296-663395:1:exon

saraf
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 451745
gene: saraf
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: store-operated calcium entry-associated regulatory factor isoform X1
translation: MRVFVLPLWFTLIDAGSVLLREVQALTFYRNQYTTARRSSPVPQLTCVGGSAGCQAFVPDVVQCRNSGWDGVDVQWECKTEMDRSYRFGRVEVSCEGYSHPSDPHVLRGSCGLEYTLELTEGLKRTQGGAGSKGRGGLGEYVSSFFSSSFQSVHQNHQSSDSERSGDLLVVVVLLLLAFGVFKLFFSGGTAPVGQAGGQDGSPHDGHHSSTAGPPPPGFKPDYTGFAGSNPSYGFHNDYVHGHYPRDRSAHVPNGGFWTGMGTGAVLGYLLGRQRFRRNQEKIVMDEDGVHGGRNGQRNSEIITTKYCVS
SIO_010081: saraf
subclass of: SO_0000673
so part of: saraf
location: join(657021..657063,658863..659044,660069..660252,660352..660615,662821..662971,663296..663404)
location: region:657021-663404:1
so has part: feature:657021-657063:1:exon
so has part: feature:658863-659044:1:exon
so has part: feature:660069-660252:1:exon
so has part: feature:660352-660615:1:exon
so has part: feature:662821-662971:1:exon
so has part: feature:663296-663404:1:exon

XP_037545952.1
type: Protein
SIO_000068: ncbiprotein

position:657021:1
position: 657021
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:663404:1
position: 663404
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:657021-657063:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:658863-659044:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:660069-660252:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:660352-660615:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:662821-662971:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:663296-663404:1:exon

saraf
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 451745
gene: saraf
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: store-operated calcium entry-associated regulatory factor isoform X2
translation: MRVFVLPLWFTLIDAGSVLLREVQALTFYRNQYTTARRSSPVPQLTCVGGSAGCQAFVPDVVQCRNSGWDGVDVQWECKTEMDRSYRFGRVEVSCEGYSHPSDPHVLRGSCGLEYTLELTEGLKRTQGGAGSKGRGGLGEYVSSFFSSSFQSVHQNHQSSDSERSGDLLVVVVLLLLAFGVFKLFFSGGTAPVGQAGGQDGSPHDGHHSSTAGPPPPGFKPDYTGFAGSNPSYGFHNDYVHGHYPRDRSAHVPNGGFWTGMGTGAVLGYLLGRQRDQPSRVPSTRNDGSAGTRTATGFGGTKRR
SIO_010081: saraf
subclass of: SO_0000673
so part of: saraf
location: join(657021..657063,658863..659044,660069..660252,660352..660615,662821..662971,663074..663138,663296..663321)
location: region:657021-663321:1
so has part: feature:657021-657063:1:exon
so has part: feature:658863-659044:1:exon
so has part: feature:660069-660252:1:exon
so has part: feature:660352-660615:1:exon
so has part: feature:662821-662971:1:exon
so has part: feature:663074-663138:1:exon
so has part: feature:663296-663321:1:exon

XP_037545953.1
type: Protein
SIO_000068: ncbiprotein

position:663321:1
position: 663321
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:657021-657063:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:658863-659044:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:660069-660252:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:660352-660615:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:662821-662971:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:663074-663138:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:663296-663321:1:exon

LOC119422994
type: Gene
subclass of: SO_0000704
RO_0002162: 451745
gene: LOC119422994
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(<684568..752346)
location: region:684568-752346:-1
so has part: feature:684568-752346:-1:exon
subclass of: SO_0000010

119422994
type: Gene
SIO_000068: ncbigene

position:684568:-1
position: 684568
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

position:752346:-1
position: 752346
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:684568-752346:-1:exon

LOC119422994
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 451745
gene: LOC119422994
product: glutamate receptor 2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 104 Proteins, and 95% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_037690405.1
SIO_010081: LOC119422994
subclass of: SO_0000673
so part of: LOC119422994
location: complement(join(<684568..684724,704011..704258,704420..704618,705687..705841,712461..712676,717118..717260,718383..718446,721817..721918,723496..723600,731485..731652,734487..734645,736641..736694,737923..737936,738526..738765,741701..741841,752059..752346))
location: region:684568-752346:-1
so has part: feature:752059-752346:-1:exon
so has part: feature:741701-741841:-1:exon
so has part: feature:738526-738765:-1:exon
so has part: feature:737923-737936:-1:exon
so has part: feature:736641-736694:-1:exon
so has part: feature:734487-734645:-1:exon
so has part: feature:731485-731652:-1:exon
so has part: feature:723496-723600:-1:exon
so has part: feature:721817-721918:-1:exon
so has part: feature:718383-718446:-1:exon
so has part: feature:717118-717260:-1:exon
so has part: feature:712461-712676:-1:exon
so has part: feature:705687-705841:-1:exon
so has part: feature:704420-704618:-1:exon
so has part: feature:704011-704258:-1:exon
so has part: feature:684568-684724:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:752059-752346:-1:exon

position:752059:-1
position: 752059
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:741701-741841:-1:exon

position:741701:-1
position: 741701
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:741841:-1
position: 741841
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:738526-738765:-1:exon

position:738526:-1
position: 738526
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:738765:-1
position: 738765
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:737923-737936:-1:exon

position:737923:-1
position: 737923
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:737936:-1
position: 737936
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:736641-736694:-1:exon

position:736641:-1
position: 736641
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:736694:-1
position: 736694
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:734487-734645:-1:exon

position:734487:-1
position: 734487
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:734645:-1
position: 734645
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:731485-731652:-1:exon

position:731485:-1
position: 731485
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:731652:-1
position: 731652
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:723496-723600:-1:exon

position:723496:-1
position: 723496
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:723600:-1
position: 723600
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:721817-721918:-1:exon

position:721817:-1
position: 721817
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:721918:-1
position: 721918
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:718383-718446:-1:exon

position:718383:-1
position: 718383
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:718446:-1
position: 718446
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:717118-717260:-1:exon

position:717118:-1
position: 717118
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:717260:-1
position: 717260
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:712461-712676:-1:exon

position:712461:-1
position: 712461
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:712676:-1
position: 712676
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:705687-705841:-1:exon

position:705687:-1
position: 705687
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:705841:-1
position: 705841
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:704420-704618:-1:exon

position:704420:-1
position: 704420
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:704618:-1
position: 704618
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:704011-704258:-1:exon

position:704011:-1
position: 704011
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:704258:-1
position: 704258
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:684568-684724:-1:exon

position:684724:-1
position: 684724
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC119422994
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 451745
gene: LOC119422994
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: glutamate receptor 2
translation: MKLLVALALVFGGGWSGTPSVQIGGLFPRGADQEYSAFRFGMVQFGMTDFRLTPHIDNLEVANSFAVTNCFCSQFSRGVYAIFGFYDKKSVNTITSFCETLHVSFITPSFPVEGTNQFVLQMRPDIKGPLVSLVEYYKWERFAYLYDSDREVFYKVITIGKHVKGYHYIIANLGFVDCDLSKIQYGGANVSGFQIVDFEDPVVAKLDQRWEALEEKEYPGADARIRYTSALTYDAVHVMTEAFRFLHKQRIDMSRRGNSGDCLANPAVPWAQGVEIERALKQVRINGLTGNIQFDQYGKRINYSVTIMELKNNGPVKIGYWNEVDRMVLTKSDPNDTMGMENKTVIVTTILEAPYVMLKKNAELFQDNDQYEGYCVDLAAEIAKHCGIRYQLKIVGDGKYGARDAETKIWNGMVGELVYGKADIAVAPLTITLVREEVIDFSKPFMSLGISIMIKKPQKSKPGVFSFLDPLAYEIWMCIVFAYIGVSVVLFLVSRFSPYEWTLEEPEDGALPLTTESINEFGIFNSLWFSLGAFMRQGCDISPRSLSGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDLAKQTEIAYGTLDSGSTKEFFRRSKIALFDKMWQYMKSAEPSVFVKKTSEGVQRVRKSKGKYAYLLESTMNEYIEQRKPCDTMKVGGNLDSKGYGIATPKGSPLRNAVNLAVLKLNEQGLLDKLKNKWWYDKGECGSGGGESKVNTHTHLRTHTHTH
SIO_010081: LOC119422994
subclass of: SO_0000673
so part of: LOC119422994
location: complement(join(<684568..684724,704011..704258,704420..704618,705687..705841,712461..712676,717118..717260,718383..718446,721817..721918,723496..723600,731485..731652,734487..734645,736641..736694,737923..737936,738526..738765,741701..741841,752059..752128))
location: region:684568-752128:-1
so has part: feature:752059-752128:-1:exon
so has part: feature:741701-741841:-1:exon
so has part: feature:738526-738765:-1:exon
so has part: feature:737923-737936:-1:exon
so has part: feature:736641-736694:-1:exon
so has part: feature:734487-734645:-1:exon
so has part: feature:731485-731652:-1:exon
so has part: feature:723496-723600:-1:exon
so has part: feature:721817-721918:-1:exon
so has part: feature:718383-718446:-1:exon
so has part: feature:717118-717260:-1:exon
so has part: feature:712461-712676:-1:exon
so has part: feature:705687-705841:-1:exon
so has part: feature:704420-704618:-1:exon
so has part: feature:704011-704258:-1:exon
so has part: feature:684568-684724:-1:exon

XP_037546333.1
type: Protein
SIO_000068: ncbiprotein

position:752128:-1
position: 752128
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:752059-752128:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:741701-741841:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:738526-738765:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:737923-737936:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:736641-736694:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:734487-734645:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:731485-731652:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:723496-723600:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:721817-721918:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:718383-718446:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:717118-717260:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:712461-712676:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:705687-705841:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:704420-704618:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:704011-704258:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:684568-684724:-1:exon

LOC119422995
type: Gene
subclass of: SO_0000704
RO_0002162: 451745
gene: LOC119422995
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(784693..809042)
location: region:784693-809042:-1
so has part: feature:784693-809042:-1:exon
subclass of: SO_0000010

119422995
type: Gene
SIO_000068: ncbigene

position:784693:-1
position: 784693
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:809042:-1
position: 809042
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:784693-809042:-1:exon

LOC119422995
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 451745
gene: LOC119422995
product: glycine receptor subunit beta-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 49% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_037690406.1
SIO_010081: LOC119422995
subclass of: SO_0000673
so part of: LOC119422995
location: complement(join(784693..784786,791526..791752,794190..794257,800751..800857,805553..805682,808922..809042))
location: region:784693-809042:-1
so has part: feature:808922-809042:-1:exon
so has part: feature:805553-805682:-1:exon
so has part: feature:800751-800857:-1:exon
so has part: feature:794190-794257:-1:exon
so has part: feature:791526-791752:-1:exon
so has part: feature:784693-784786:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:808922-809042:-1:exon

position:808922:-1
position: 808922
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:805553-805682:-1:exon

position:805553:-1
position: 805553
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:805682:-1
position: 805682
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:800751-800857:-1:exon

position:800751:-1
position: 800751
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:800857:-1
position: 800857
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:794190-794257:-1:exon

position:794190:-1
position: 794190
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:794257:-1
position: 794257
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:791526-791752:-1:exon

position:791526:-1
position: 791526
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:791752:-1
position: 791752
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:784693-784786:-1:exon

position:784786:-1
position: 784786
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC119422995
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 451745
gene: LOC119422995
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: glycine receptor subunit beta-like
translation: MTPGLRPTVLLLLLICCWQLNTAKDGKSAKKGKKGKQVICPSQLSPEDLAQVPANSTSNILNRLMVSYDPRIRPNFQGIPVESRVNIFINSFGSIQETTMDYRVNIFLRQRWNDPRLRLPTDFKSEALTVDPNMFQCLWKPDLFFANEKNANFHDVTQDNILLFIFRNGDVLISMRLSVTLSCPLDLTLFPMDTQLCKMQLESCEY
SIO_010081: LOC119422995
subclass of: SO_0000673
so part of: LOC119422995
location: complement(join(784693..784786,791526..791752,794190..794257,800751..800857,805553..805677))
location: region:784693-805677:-1
so has part: feature:805553-805677:-1:exon
so has part: feature:800751-800857:-1:exon
so has part: feature:794190-794257:-1:exon
so has part: feature:791526-791752:-1:exon
so has part: feature:784693-784786:-1:exon

XP_037546334.1
type: Protein
SIO_000068: ncbiprotein

position:805677:-1
position: 805677
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:805553-805677:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:800751-800857:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:794190-794257:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:791526-791752:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:784693-784786:-1:exon

LOC119422641
type: Gene
subclass of: SO_0000704
RO_0002162: 451745
gene: LOC119422641
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(816660..823335)
location: region:816660-823335:-1
so has part: feature:816660-823335:-1:exon
subclass of: SO_0000010

119422641
type: Gene
SIO_000068: ncbigene

position:816660:-1
position: 816660
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:823335:-1
position: 823335
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:816660-823335:-1:exon

LOC119422641
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 451745
gene: LOC119422641
product: NADH dehydrogenase [ubiquinone] iron-sulfur protein 8, mitochondrial
inference: similar to RNA sequence (same species):INSD:GELZ01025876.1
exception: annotated by transcript or proteomic data
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: added 458 bases not found in genome assembly; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 95% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_037690026.1
SIO_010081: LOC119422641
subclass of: SO_0000673
so part of: LOC119422641
location: complement(join(816660..>817181,<820854..820909,823259..823335))
location: region:816660-823335:-1
so has part: feature:823259-823335:-1:exon
so has part: feature:820854-820909:-1:exon
so has part: feature:816660-817181:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:823259-823335:-1:exon

position:823259:-1
position: 823259
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:820854-820909:-1:exon

position:820854:-1
position: 820854
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

position:820909:-1
position: 820909
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:816660-817181:-1:exon

position:817181:-1
position: 817181
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

LOC119422641
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 451745
gene: LOC119422641
inference: similar to RNA sequence (same species):INSD:GELZ01025876.1
exception: annotated by transcript or proteomic data
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: added 458 bases not found in genome assembly; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: NADH dehydrogenase [ubiquinone] iron-sulfur protein 8, mitochondrial
translation: MAATFRCLSSISRQGMLGASQYRLRSFSLTVHRHGFKYVNAKEVPDDLNSITERAIRMLLWSELFRGLAMTMSYLFREPATISYPFEKGPLSPRFRGEHALRRYPSGEERCIACKLCEAICPAQAITIEAETRADGSRRTTRYDIDMTKCIYCGFCQEACPVDAIVEGPNFEYSTETHEELLYNKEKLLNNGDKWESEIAANIQADYLYR
SIO_010081: LOC119422641
subclass of: SO_0000673
so part of: LOC119422641
location: complement(join(817050..>817181,<820854..820896))
location: region:817050-820896:-1
so has part: feature:820854-820896:-1:exon
so has part: feature:817050-817181:-1:exon

XP_037545954.1
type: Protein
SIO_000068: ncbiprotein

position:817050:-1
position: 817050
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:820896:-1
position: 820896
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:820854-820896:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:817050-817181:-1:exon

tbck
type: Gene
subclass of: SO_0000704
RO_0002162: 451745
gene: tbck
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(828180..871118)
location: region:828180-871118:-1
so has part: feature:828180-871118:-1:exon
subclass of: SO_0000010

119422997
type: Gene
SIO_000068: ncbigene

position:828180:-1
position: 828180
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:871118:-1
position: 871118
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:828180-871118:-1:exon

tbck
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 451745
gene: tbck
product: TBC1 domain containing kinase
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 Proteins, and 87% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_037690408.1
SIO_010081: tbck
subclass of: SO_0000673
so part of: tbck
location: complement(join(828180..828568,832549..832708,841595..841758,845188..845360,846885..847050,849957..850042,856477..856560,856641..856691,856858..856984,857066..857128,857198..857296,858332..858461,858561..858610,859893..859992,860113..860251,861819..861961,862137..862198,866565..866626,866698..866758,866844..866985,867076..867149,867293..867407,867631..867700,870570..870796,870987..871118))
location: region:828180-871118:-1
so has part: feature:870987-871118:-1:exon
so has part: feature:870570-870796:-1:exon
so has part: feature:867631-867700:-1:exon
so has part: feature:867293-867407:-1:exon
so has part: feature:867076-867149:-1:exon
so has part: feature:866844-866985:-1:exon
so has part: feature:866698-866758:-1:exon
so has part: feature:866565-866626:-1:exon
so has part: feature:862137-862198:-1:exon
so has part: feature:861819-861961:-1:exon
so has part: feature:860113-860251:-1:exon
so has part: feature:859893-859992:-1:exon
so has part: feature:858561-858610:-1:exon
so has part: feature:858332-858461:-1:exon
so has part: feature:857198-857296:-1:exon
so has part: feature:857066-857128:-1:exon
so has part: feature:856858-856984:-1:exon
so has part: feature:856641-856691:-1:exon
so has part: feature:856477-856560:-1:exon
so has part: feature:849957-850042:-1:exon
so has part: feature:846885-847050:-1:exon
so has part: feature:845188-845360:-1:exon
so has part: feature:841595-841758:-1:exon
so has part: feature:832549-832708:-1:exon
so has part: feature:828180-828568:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:870987-871118:-1:exon

position:870987:-1
position: 870987
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:870570-870796:-1:exon

position:870570:-1
position: 870570
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:870796:-1
position: 870796
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:867631-867700:-1:exon

position:867631:-1
position: 867631
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:867700:-1
position: 867700
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:867293-867407:-1:exon

position:867293:-1
position: 867293
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:867407:-1
position: 867407
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:867076-867149:-1:exon

position:867076:-1
position: 867076
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:867149:-1
position: 867149
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:866844-866985:-1:exon

position:866844:-1
position: 866844
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:866985:-1
position: 866985
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:866698-866758:-1:exon

position:866698:-1
position: 866698
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:866758:-1
position: 866758
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:866565-866626:-1:exon

position:866565:-1
position: 866565
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:866626:-1
position: 866626
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:862137-862198:-1:exon

position:862137:-1
position: 862137
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:862198:-1
position: 862198
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:861819-861961:-1:exon

position:861819:-1
position: 861819
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:861961:-1
position: 861961
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:860113-860251:-1:exon

position:860113:-1
position: 860113
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:860251:-1
position: 860251
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:859893-859992:-1:exon

position:859893:-1
position: 859893
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:859992:-1
position: 859992
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:858561-858610:-1:exon

position:858561:-1
position: 858561
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:858610:-1
position: 858610
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:858332-858461:-1:exon

position:858332:-1
position: 858332
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:858461:-1
position: 858461
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:857198-857296:-1:exon

position:857198:-1
position: 857198
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:857296:-1
position: 857296
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:857066-857128:-1:exon

position:857066:-1
position: 857066
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:857128:-1
position: 857128
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:856858-856984:-1:exon

position:856858:-1
position: 856858
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:856984:-1
position: 856984
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:856641-856691:-1:exon

position:856641:-1
position: 856641
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:856691:-1
position: 856691
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:856477-856560:-1:exon

position:856477:-1
position: 856477
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:856560:-1
position: 856560
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:849957-850042:-1:exon

position:849957:-1
position: 849957
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:850042:-1
position: 850042
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:846885-847050:-1:exon

position:846885:-1
position: 846885
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:847050:-1
position: 847050
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:845188-845360:-1:exon

position:845188:-1
position: 845188
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:845360:-1
position: 845360
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:841595-841758:-1:exon

position:841595:-1
position: 841595
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:841758:-1
position: 841758
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:832549-832708:-1:exon

position:832549:-1
position: 832549
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:832708:-1
position: 832708
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:828180-828568:-1:exon

position:828568:-1
position: 828568
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

tbck
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 451745
gene: tbck
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: TBC domain-containing protein kinase-like protein
translation: MRPLKDAQLGAFTFFASALPHDVCGSNGLPLTPNSIKILGRFQILKSITHPTLCQYVDISRGKHERLTVVAEHYVRNVGDFSRGQRVSPEKVLQVAFEVLQGLEFMNKHGLVHRALSVHNVLLDCKGNVKLAKFGLYHMTDRGADVDFPIGYPSYLAPEVIALGCFHRSDPSHDDAPRPSGPKTDVWSLGVLLLELCTGRRLLQNLEIREKLKFILTLGCMDDIVTVLAEEHGCLETIRELPENVLQILRKCLTFLPSQRPSPAELLAEPLFQSCLGPPVQRQVQLFSCALRCAHLELPEDISDLCKDDDEDYLSERGIDEVYHLWCLAGGDLEKELTNKEIIQSKPPICTLPNFVLEDGEPFGQCRDRSFLLDDTTVTLPLCQLRNRLKDVAGEAYFPLLEDEQSTLPQSNSSNELSATVTLPLIIRERDTEYQLIRIILFERLLKAYPYKKNCVWKEARVDIPPLVRGPAWAALLGIEGDIQAKYDSIDKDTPIPTDRQIEVDIPRCHQYDELLSSPEGHIKFRRVLKAWVVSHLDLVYWQGLDSLCAPFLYLNFNNEALAYACMSAFIPKYLYNFFLKDNSHVIQEYLTVFSQMIAFHDPELSNHLNEIGFIPDADVFPLHKIFHLWDTLLLGNSSFPFCIGVAILQQLRDRLLANGFNECILLFSDLPEIDIERCVRESINLFCWTPKSATYRQHAQPPKASADSTFTKTPTYFSSDYQDMPRTDLSREPLILSDLKAEVSPRISAEDLIDLCELSLAGPPKRNKGGKPKIVAVDIRTVEDFSKGHVSGSINVPFSSVFNCDGEPVQCPTSGALQNYRGRVIVIISHAVKSATMFAAHLVKVNYSRVCILDGGISKLKPTGLLTVPSPQI
SIO_010081: tbck
subclass of: SO_0000673
so part of: tbck
location: complement(join(828458..828568,832549..832708,841595..841758,845188..845360,846885..847050,849957..850042,856477..856560,856641..856691,856858..856984,857066..857128,857198..857296,858332..858461,858561..858610,859893..859992,860113..860251,861819..861961,862137..862198,866565..866626,866698..866758,866844..866985,867076..867149,867293..867407,867631..867700,870570..870762))
location: region:828458-870762:-1
so has part: feature:870570-870762:-1:exon
so has part: feature:867631-867700:-1:exon
so has part: feature:867293-867407:-1:exon
so has part: feature:867076-867149:-1:exon
so has part: feature:866844-866985:-1:exon
so has part: feature:866698-866758:-1:exon
so has part: feature:866565-866626:-1:exon
so has part: feature:862137-862198:-1:exon
so has part: feature:861819-861961:-1:exon
so has part: feature:860113-860251:-1:exon
so has part: feature:859893-859992:-1:exon
so has part: feature:858561-858610:-1:exon
so has part: feature:858332-858461:-1:exon
so has part: feature:857198-857296:-1:exon
so has part: feature:857066-857128:-1:exon
so has part: feature:856858-856984:-1:exon
so has part: feature:856641-856691:-1:exon
so has part: feature:856477-856560:-1:exon
so has part: feature:849957-850042:-1:exon
so has part: feature:846885-847050:-1:exon
so has part: feature:845188-845360:-1:exon
so has part: feature:841595-841758:-1:exon
so has part: feature:832549-832708:-1:exon
so has part: feature:828458-828568:-1:exon

XP_037546336.1
type: Protein
SIO_000068: ncbiprotein

position:828458:-1
position: 828458
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:870762:-1
position: 870762
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:870570-870762:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:867631-867700:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:867293-867407:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:867076-867149:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:866844-866985:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:866698-866758:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:866565-866626:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:862137-862198:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:861819-861961:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:860113-860251:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:859893-859992:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:858561-858610:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:858332-858461:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:857198-857296:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:857066-857128:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:856858-856984:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:856641-856691:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:856477-856560:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:849957-850042:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:846885-847050:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:845188-845360:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:841595-841758:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:832549-832708:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:828458-828568:-1:exon

aimp1a
type: Gene
subclass of: SO_0000704
RO_0002162: 451745
gene: aimp1a
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 871444..890758
location: region:871444-890758:1
so has part: feature:871444-890758:1:exon
subclass of: SO_0000010

119422642
type: Gene
SIO_000068: ncbigene

position:871444:1
position: 871444
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:890758:1
position: 890758
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:871444-890758:1:exon

aimp1a
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 451745
gene: aimp1a
product: aminoacyl tRNA synthetase complex interacting multifunctional protein 1a
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_037690027.1
SIO_010081: aimp1a
subclass of: SO_0000673
so part of: aimp1a
location: join(871444..871522,881462..881592,881802..881915,886500..886646,888077..888282,889411..889579,890445..890758)
location: region:871444-890758:1
so has part: feature:871444-871522:1:exon
so has part: feature:881462-881592:1:exon
so has part: feature:881802-881915:1:exon
so has part: feature:886500-886646:1:exon
so has part: feature:888077-888282:1:exon
so has part: feature:889411-889579:1:exon
so has part: feature:890445-890758:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:871444-871522:1:exon

position:871522:1
position: 871522
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:881462-881592:1:exon

position:881462:1
position: 881462
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:881592:1
position: 881592
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:881802-881915:1:exon

position:881802:1
position: 881802
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:881915:1
position: 881915
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:886500-886646:1:exon

position:886500:1
position: 886500
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:886646:1
position: 886646
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:888077-888282:1:exon

position:888077:1
position: 888077
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:888282:1
position: 888282
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:889411-889579:1:exon

position:889411:1
position: 889411
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:889579:1
position: 889579
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:890445-890758:1:exon

position:890445:1
position: 890445
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

aimp1a
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 451745
gene: aimp1a
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: aminoacyl tRNA synthase complex-interacting multifunctional protein 1a
translation: MFSWRSLSTMSSPTPLLRLQQRAAEAEQLIEFLKQQVQLLKDKAIVQASVREEKKLLVENAKLKHDIEDLKQQLLDKETKRGVQEVALPSGDTSVDLCAKTTPPRPSDAHPSAAQSKPPRDEPKKKKQEKKGEKAEKKQATPSQDEAKVDVSRLDLRVGRIISAEKHPDADSLYVEQVDVGEAAPRTVVSGLVKHIPLEQMQSRMAVLLCNLKAAKMRGVLSQAMVMCASSPDKVEILDPPSGAVPGDRVTVQDFPGEPDKELNPKKKVWEQVQPDLRTDRHCVATYKGAAFQVVGKGVCKAQTMSNSGIK
SIO_010081: aimp1a
subclass of: SO_0000673
so part of: aimp1a
location: join(871521..871522,881462..881592,881802..881915,886500..886646,888077..888282,889411..889579,890445..890611)
location: region:871521-890611:1
so has part: feature:871521-871522:1:exon
so has part: feature:881462-881592:1:exon
so has part: feature:881802-881915:1:exon
so has part: feature:886500-886646:1:exon
so has part: feature:888077-888282:1:exon
so has part: feature:889411-889579:1:exon
so has part: feature:890445-890611:1:exon

XP_037545955.1
type: Protein
SIO_000068: ncbiprotein

position:871521:1
position: 871521
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:890611:1
position: 890611
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:871521-871522:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:881462-881592:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:881802-881915:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:886500-886646:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:888077-888282:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:889411-889579:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:890445-890611:1:exon

dkk2
type: Gene
subclass of: SO_0000704
RO_0002162: 451745
gene: dkk2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(934013..949685)
location: region:934013-949685:-1
so has part: feature:934013-949685:-1:exon
subclass of: SO_0000010

119422643
type: Gene
SIO_000068: ncbigene

position:934013:-1
position: 934013
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:949685:-1
position: 949685
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:934013-949685:-1:exon

dkk2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 451745
gene: dkk2
product: dickkopf WNT signaling pathway inhibitor 2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 19 Proteins, and 52% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_037690029.1
SIO_010081: dkk2
subclass of: SO_0000673
so part of: dkk2
location: complement(join(934013..934410,938838..938963,940247..940400,949488..949685))
location: region:934013-949685:-1
so has part: feature:949488-949685:-1:exon
so has part: feature:940247-940400:-1:exon
so has part: feature:938838-938963:-1:exon
so has part: feature:934013-934410:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:949488-949685:-1:exon

position:949488:-1
position: 949488
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:940247-940400:-1:exon

position:940247:-1
position: 940247
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:940400:-1
position: 940400
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:938838-938963:-1:exon

position:938838:-1
position: 938838
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:938963:-1
position: 938963
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:934013-934410:-1:exon

position:934410:-1
position: 934410
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

dkk2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 451745
gene: dkk2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: dickkopf-related protein 2
translation: MRVSTWSRCCAVMFLLSSVKTRAPQLPEARPKPNSIRPGLPEESGAHLAAGNRTTPVTKKRTILPQQVYPCSNDKECSVGSYCDSPQQAPSRCRTCRRRKKRCHRDAMCCPGNHCSNYICVSIAESVLSPHISALDDPRTTKEQSWRRKGKAQAKITPKGHEGDSCLRSSDCLDGYCCARHFWTKICKPVLRQGEVCTKQRKKGAHGLEIFQRCDCAKGLSCKVWKDATSSSKSRLHMCQKI
SIO_010081: dkk2
subclass of: SO_0000673
so part of: dkk2
location: complement(join(934160..934410,938838..938963,940247..940400,949488..949685))
location: region:934160-949685:-1
so has part: feature:949488-949685:-1:exon
so has part: feature:940247-940400:-1:exon
so has part: feature:938838-938963:-1:exon
so has part: feature:934160-934410:-1:exon

XP_037545957.1
type: Protein
SIO_000068: ncbiprotein

position:934160:-1
position: 934160
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:949488-949685:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:940247-940400:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:938838-938963:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:934160-934410:-1:exon

papss1
type: Gene
subclass of: SO_0000704
RO_0002162: 451745
gene: papss1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(995199..1025952)
location: region:995199-1025952:-1
so has part: feature:995199-1025952:-1:exon
subclass of: SO_0000010

119422644
type: Gene
SIO_000068: ncbigene

position:995199:-1
position: 995199
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1025952:-1
position: 1025952
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:995199-1025952:-1:exon

papss1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 451745
gene: papss1
product: 3'-phosphoadenosine 5'-phosphosulfate synthase 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 23 Proteins, and 95% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_037690030.1
SIO_010081: papss1
subclass of: SO_0000673
so part of: papss1
location: complement(join(995199..995527,998265..998494,1001319..1001587,1001884..1002019,1008929..1009134,1013451..1013562,1014167..1014280,1014585..1014703,1016221..1016359,1016447..1016682,1020888..1021002,1025714..1025952))
location: region:995199-1025952:-1
so has part: feature:1025714-1025952:-1:exon
so has part: feature:1020888-1021002:-1:exon
so has part: feature:1016447-1016682:-1:exon
so has part: feature:1016221-1016359:-1:exon
so has part: feature:1014585-1014703:-1:exon
so has part: feature:1014167-1014280:-1:exon
so has part: feature:1013451-1013562:-1:exon
so has part: feature:1008929-1009134:-1:exon
so has part: feature:1001884-1002019:-1:exon
so has part: feature:1001319-1001587:-1:exon
so has part: feature:998265-998494:-1:exon
so has part: feature:995199-995527:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1025714-1025952:-1:exon

position:1025714:-1
position: 1025714
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1020888-1021002:-1:exon

position:1020888:-1
position: 1020888
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1021002:-1
position: 1021002
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1016447-1016682:-1:exon

position:1016447:-1
position: 1016447
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1016682:-1
position: 1016682
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1016221-1016359:-1:exon

position:1016221:-1
position: 1016221
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1016359:-1
position: 1016359
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1014585-1014703:-1:exon

position:1014585:-1
position: 1014585
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1014703:-1
position: 1014703
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1014167-1014280:-1:exon

position:1014167:-1
position: 1014167
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1014280:-1
position: 1014280
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1013451-1013562:-1:exon

position:1013451:-1
position: 1013451
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1013562:-1
position: 1013562
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1008929-1009134:-1:exon

position:1008929:-1
position: 1008929
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1009134:-1
position: 1009134
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1001884-1002019:-1:exon

position:1001884:-1
position: 1001884
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1002019:-1
position: 1002019
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1001319-1001587:-1:exon

position:1001319:-1
position: 1001319
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1001587:-1
position: 1001587
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:998265-998494:-1:exon

position:998265:-1
position: 998265
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:998494:-1
position: 998494
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:995199-995527:-1:exon

position:995527:-1
position: 995527
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

papss1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 451745
gene: papss1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: bifunctional 3'-phosphoadenosine 5'-phosphosulfate synthase 1
translation: MMETHGNKKPKLSNVTESWGMQRATNVTYQAHHVSRNKRGQVVGTRGGFRGCAVWLTGLSGAGKTTVSMALEEYLVCHGIPCYTLDGDNIRQGLNKNLGFSPEDREENIRRIAEVARLFADAGLVCIASFISPYSRDRLNARKIHEAAGLPFFEVFVDAPLDVCEQRDVKGLYKRARAGEIRGFTGIDSEYEKPEAPELVLKTDSCSVNECIQQLVDLLQERDIVPVDASYEVKELYVQENKLDLAKADAESLPAVHIGKVDMQWVQVLAEGWATPLNGFMREREYLQCLHFDCLLDGGVINLSVPVVLPVSTADKEQLEGVTAVALVFEGRRVAILRNPEFYEHRKEERCARQWGTTCKDHPYIKMVMESGDWLVGGDLQVLDRIYWNDGLDQYRLTPTELKQKFKEMNADAVFAFQLRNPVHNGHALLMQDTHKRLIERGYRRPVLLLHPLGGWTKDDDVPLHWRMKQHAAVLEEGVLDSDSTIVAIFPSPMMYAGPTEVQWHCRARMVAGANFYIVGRDPAGMPHPETGKDLYEPTHGAKVLTMAPGLITLEIVPFKVAAYNKVKSAMDFYDPNKHQDYDFISGTRMRKMAREGQNPPVGFMALKAWAVLKEYYKSLEKA
SIO_010081: papss1
subclass of: SO_0000673
so part of: papss1
location: complement(join(995389..995527,998265..998494,1001319..1001587,1001884..1002019,1008929..1009134,1013451..1013562,1014167..1014280,1014585..1014703,1016221..1016359,1016447..1016682,1020888..1021002,1025714..1025770))
location: region:995389-1025770:-1
so has part: feature:1025714-1025770:-1:exon
so has part: feature:1020888-1021002:-1:exon
so has part: feature:1016447-1016682:-1:exon
so has part: feature:1016221-1016359:-1:exon
so has part: feature:1014585-1014703:-1:exon
so has part: feature:1014167-1014280:-1:exon
so has part: feature:1013451-1013562:-1:exon
so has part: feature:1008929-1009134:-1:exon
so has part: feature:1001884-1002019:-1:exon
so has part: feature:1001319-1001587:-1:exon
so has part: feature:998265-998494:-1:exon
so has part: feature:995389-995527:-1:exon

XP_037545958.1
type: Protein
SIO_000068: ncbiprotein

position:995389:-1
position: 995389
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1025770:-1
position: 1025770
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1025714-1025770:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1020888-1021002:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1016447-1016682:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1016221-1016359:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1014585-1014703:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1014167-1014280:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1013451-1013562:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1008929-1009134:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1001884-1002019:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1001319-1001587:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:998265-998494:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:995389-995527:-1:exon

sgms2a
type: Gene
subclass of: SO_0000704
RO_0002162: 451745
gene: sgms2a
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1034354..1040973
location: region:1034354-1040973:1
so has part: feature:1034354-1040973:1:exon
subclass of: SO_0000010

119422645
type: Gene
SIO_000068: ncbigene

position:1034354:1
position: 1034354
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1040973:1
position: 1040973
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1034354-1040973:1:exon

sgms2a
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 451745
gene: sgms2a
product: sphingomyelin synthase 2a
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 26 Proteins, and 65% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_037690031.1
SIO_010081: sgms2a
subclass of: SO_0000673
so part of: sgms2a
location: join(1034354..1034793,1038459..1038576,1038798..1038951,1039194..1039360,1040788..1040973)
location: region:1034354-1040973:1
so has part: feature:1034354-1034793:1:exon
so has part: feature:1038459-1038576:1:exon
so has part: feature:1038798-1038951:1:exon
so has part: feature:1039194-1039360:1:exon
so has part: feature:1040788-1040973:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1034354-1034793:1:exon

position:1034793:1
position: 1034793
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1038459-1038576:1:exon

position:1038459:1
position: 1038459
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1038576:1
position: 1038576
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1038798-1038951:1:exon

position:1038798:1
position: 1038798
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1038951:1
position: 1038951
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1039194-1039360:1:exon

position:1039194:1
position: 1039194
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1039360:1
position: 1039360
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1040788-1040973:1:exon

position:1040788:1
position: 1040788
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

sgms2a
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 451745
gene: sgms2a
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: phosphatidylcholine:ceramide cholinephosphotransferase 2
translation: MASGEHPDSGDCTVDHLHSGMEGAFIPSTVKTCPVHNPDSTRGFQKGINQHNDYVEIPVPESQVNLLPSEWWKTVIAFFYAAFNLVLTTIVITMVHERVPPKESYPPLPDKFFDYIDRVQWAFTVTEINGIVLLTIWLIQLLFFKYRSIVIRRFFFLIGTLYLYRCVTMYVTTLPVPGMHMNCAPKLQGDTQAKLQRVLRLISGGGLSMTNSHLLCGDFLYSGHTVMLTLTYLFIKEYSPRSFWWYHLLCWLLSAVGVVCILVAHEHYTVDVVVAYFITSRLFWWYHTMANLQTLKCSPNNYLTNTWWNPVFTLFERNVQTSVQCSYSWPITWPPSCLKSPCKTYSMVQSTRDE
SIO_010081: sgms2a
subclass of: SO_0000673
so part of: sgms2a
location: join(1034354..1034793,1038459..1038576,1038798..1038951,1039194..1039360,1040788..1040973)
location: region:1034354-1040973:1
so has part: feature:1034354-1034793:1:exon
so has part: feature:1038459-1038576:1:exon
so has part: feature:1038798-1038951:1:exon
so has part: feature:1039194-1039360:1:exon
so has part: feature:1040788-1040973:1:exon

XP_037545959.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1034354-1034793:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1038459-1038576:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1038798-1038951:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1039194-1039360:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1040788-1040973:1:exon

LOC119423000
type: Gene
subclass of: SO_0000704
RO_0002162: 451745
gene: LOC119423000
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1047318..1053787
location: region:1047318-1053787:1
so has part: feature:1047318-1053787:1:exon
subclass of: SO_0000010

119423000
type: Gene
SIO_000068: ncbigene

position:1047318:1
position: 1047318
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1053787:1
position: 1053787
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1047318-1053787:1:exon

LOC119423000
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 451745
gene: LOC119423000
product: cytochrome P450 2U1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 28 Proteins, and 58% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_037690412.1
SIO_010081: LOC119423000
subclass of: SO_0000673
so part of: LOC119423000
location: join(1047318..1047746,1050343..1050993,1053078..1053239,1053316..1053483,1053558..1053787)
location: region:1047318-1053787:1
so has part: feature:1047318-1047746:1:exon
so has part: feature:1050343-1050993:1:exon
so has part: feature:1053078-1053239:1:exon
so has part: feature:1053316-1053483:1:exon
so has part: feature:1053558-1053787:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1047318-1047746:1:exon

position:1047746:1
position: 1047746
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1050343-1050993:1:exon

position:1050343:1
position: 1050343
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1050993:1
position: 1050993
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1053078-1053239:1:exon

position:1053078:1
position: 1053078
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1053239:1
position: 1053239
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1053316-1053483:1:exon

position:1053316:1
position: 1053316
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1053483:1
position: 1053483
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1053558-1053787:1:exon

position:1053558:1
position: 1053558
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC119423000
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 451745
gene: LOC119423000
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cytochrome P450 2U1
translation: MESWLQLASSLVLSPSNVVPVTALLLALYLLTVYRRQAATLHNIPPGPRPWPLVGNFGGFLVPPSFRKTFGLHDGTSVMEALTSLAALHGDIFSLFVGSQLVVVLNGYDVVRDALSNHPEVFSDRPDIPSISILTKRKGIVFAPYGPVWRKQRKFCHTTLRNFGLGKLSLEPCIQRGLATIKAELLTLNKECGGAGVDLSPLISNAVSNVICSLILGQRFHHGDPEFRTILSLMGRGLEICNNSAAVLINAFSLLYYLPFGVFKELRQVERDITVFLKRIIANHRETLDPENPRDLADMYLIEMLAQQAAGEKDSSFTEDYLFYIMGDLFIAGTDTTTNSVLWTLLYLALHPDIQDKVHAEIAAVVGRRRPPSLTDKGSLPFTEATIMEVQRLAAVVPLSVPHMASETTEFRGYTVPKGTVLLPNLYSVHRDPRVWDDPDTFNPERFLDDEGQLLRKEFLVPFGLGRRVCMGEQLAKMELFLTLTGLLQTFSFTLPAGTPPPSLHGRFGLTLSPCPFSVCVTARSEEHVSRGQDAVKHRRS
SIO_010081: LOC119423000
subclass of: SO_0000673
so part of: LOC119423000
location: join(1047332..1047746,1050343..1050993,1053078..1053239,1053316..1053483,1053558..1053787)
location: region:1047332-1053787:1
so has part: feature:1047332-1047746:1:exon
so has part: feature:1050343-1050993:1:exon
so has part: feature:1053078-1053239:1:exon
so has part: feature:1053316-1053483:1:exon
so has part: feature:1053558-1053787:1:exon

XP_037546340.1
type: Protein
SIO_000068: ncbiprotein

position:1047332:1
position: 1047332
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1047332-1047746:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1050343-1050993:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1053078-1053239:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1053316-1053483:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1053558-1053787:1:exon

hadh
type: Gene
subclass of: SO_0000704
RO_0002162: 451745
gene: hadh
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1058534..1065712
location: region:1058534-1065712:1
so has part: feature:1058534-1065712:1:exon
subclass of: SO_0000010

119422646
type: Gene
SIO_000068: ncbigene

position:1058534:1
position: 1058534
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1065712:1
position: 1065712
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1058534-1065712:1:exon

hadh
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 451745
gene: hadh
product: hydroxyacyl-CoA dehydrogenase
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 25 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_037690032.1
SIO_010081: hadh
subclass of: SO_0000673
so part of: hadh
location: join(1058534..1058722,1059299..1059427,1059494..1059651,1060850..1060976,1062532..1062621,1062759..1062831,1062918..1063034,1065391..1065712)
location: region:1058534-1065712:1
so has part: feature:1058534-1058722:1:exon
so has part: feature:1059299-1059427:1:exon
so has part: feature:1059494-1059651:1:exon
so has part: feature:1060850-1060976:1:exon
so has part: feature:1062532-1062621:1:exon
so has part: feature:1062759-1062831:1:exon
so has part: feature:1062918-1063034:1:exon
so has part: feature:1065391-1065712:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1058534-1058722:1:exon

position:1058722:1
position: 1058722
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1059299-1059427:1:exon

position:1059299:1
position: 1059299
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1059427:1
position: 1059427
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1059494-1059651:1:exon

position:1059494:1
position: 1059494
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1059651:1
position: 1059651
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1060850-1060976:1:exon

position:1060850:1
position: 1060850
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1060976:1
position: 1060976
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1062532-1062621:1:exon

position:1062532:1
position: 1062532
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1062621:1
position: 1062621
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1062759-1062831:1:exon

position:1062759:1
position: 1062759
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1062831:1
position: 1062831
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1062918-1063034:1:exon

position:1062918:1
position: 1062918
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1063034:1
position: 1063034
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1065391-1065712:1:exon

position:1065391:1
position: 1065391
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

hadh
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 451745
gene: hadh
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: hydroxyacyl-coenzyme A dehydrogenase, mitochondrial
translation: MASLCQLVSRGFCSSAARNTVIKHVTVIGAGLMGAGITQVAACTGHTVSLVDVSEDVLKKSVQGMEGSLRRVAKKKFADKHEAAEEFIQKVLQNVSVSTDVASAVAASHLVLEAIVENLKVKRDLFARLDKLAPEHTIFASNTSSLPITDIASSTSRQDRFGGLHFFNPVPMMKLVEVVGTSATSRETFDSLLNFSRSLGKTAVSCKDTPGFIVNRLLVPYMMEAVRLYERGDGSKEDIDIAMKLGAGYPMGPFELGDYVGLDTIKFIIDGWSAYNPDNPLFAQSELLNKLVADGKLGRKTGEGFYKYK
SIO_010081: hadh
subclass of: SO_0000673
so part of: hadh
location: join(1058606..1058722,1059299..1059427,1059494..1059651,1060850..1060976,1062532..1062621,1062759..1062831,1062918..1063034,1065391..1065509)
location: region:1058606-1065509:1
so has part: feature:1058606-1058722:1:exon
so has part: feature:1059299-1059427:1:exon
so has part: feature:1059494-1059651:1:exon
so has part: feature:1060850-1060976:1:exon
so has part: feature:1062532-1062621:1:exon
so has part: feature:1062759-1062831:1:exon
so has part: feature:1062918-1063034:1:exon
so has part: feature:1065391-1065509:1:exon

XP_037545960.1
type: Protein
SIO_000068: ncbiprotein

position:1058606:1
position: 1058606
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1065509:1
position: 1065509
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1058606-1058722:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1059299-1059427:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1059494-1059651:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1060850-1060976:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1062532-1062621:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1062759-1062831:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1062918-1063034:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1065391-1065509:1:exon

lef1
type: Gene
subclass of: SO_0000704
RO_0002162: 451745
gene: lef1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1070185..1140993)
location: region:1070185-1140993:-1
so has part: feature:1070185-1140993:-1:exon
subclass of: SO_0000010

119422647
type: Gene
SIO_000068: ncbigene

position:1070185:-1
position: 1070185
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1140993:-1
position: 1140993
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1070185-1140993:-1:exon

lef1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 451745
gene: lef1
product: lymphoid enhancer-binding factor 1
inference: similar to RNA sequence (same species):INSD:GELZ01023393.1
exception: annotated by transcript or proteomic data
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: added 67 bases not found in genome assembly; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 20 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_037690033.1
SIO_010081: lef1
subclass of: SO_0000673
so part of: lef1
location: complement(join(1070185..1070646,1091637..1091685,1093204..1093311,1097182..1097344,1097938..1098057,1098456..1098546,1104892..1105024,1131751..>1131878,<1140743..1140993))
location: region:1070185-1140993:-1
so has part: feature:1140743-1140993:-1:exon
so has part: feature:1131751-1131878:-1:exon
so has part: feature:1104892-1105024:-1:exon
so has part: feature:1098456-1098546:-1:exon
so has part: feature:1097938-1098057:-1:exon
so has part: feature:1097182-1097344:-1:exon
so has part: feature:1093204-1093311:-1:exon
so has part: feature:1091637-1091685:-1:exon
so has part: feature:1070185-1070646:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1140743-1140993:-1:exon

position:1140743:-1
position: 1140743
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1131751-1131878:-1:exon

position:1131751:-1
position: 1131751
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1131878:-1
position: 1131878
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1104892-1105024:-1:exon

position:1104892:-1
position: 1104892
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1105024:-1
position: 1105024
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1098456-1098546:-1:exon

position:1098456:-1
position: 1098456
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1098546:-1
position: 1098546
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1097938-1098057:-1:exon

position:1097938:-1
position: 1097938
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1098057:-1
position: 1098057
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1097182-1097344:-1:exon

position:1097182:-1
position: 1097182
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1097344:-1
position: 1097344
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1093204-1093311:-1:exon

position:1093204:-1
position: 1093204
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1093311:-1
position: 1093311
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1091637-1091685:-1:exon

position:1091637:-1
position: 1091637
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1091685:-1
position: 1091685
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1070185-1070646:-1:exon

position:1070646:-1
position: 1070646
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

lef1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 451745
gene: lef1
inference: similar to RNA sequence (same species):INSD:GELZ01023393.1
exception: annotated by transcript or proteomic data
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: added 67 bases not found in genome assembly; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: lymphoid enhancer-binding factor 1
translation: MPQLSAGGAGDPELCATDEMIPFKDEGDPHKEQIFAELSHSEEEGDLADIKSSLVHESESSPNSNSHDAARQSQIAADSYHDKHRDHPDDVKHPDLYGKGHPYPSYPSYIMMSNMSSDSYMNTCSLSPPMARTSNKVPVVQPSHAVHPLTPLITYSDEHFSPGSHSGHHPQDTNNKQGMARHHPGPDMANFYSLSPGGVGQITPPLGWFSHHMVPGPPGPHATGIPHPAIVNPQVKQEPPHDSDIMHMKSQHEQRKEQEPKRPHIKKPLNAFMLYMKEMRANVVAECTLKESAAINQILGRRWHALSREEQAKYYELARKERQLHMQLYPGWSARDNYGKKKKRKREKMQESAPAGKRSNFSTCKAKAADTLLEMEAC
SIO_010081: lef1
subclass of: SO_0000673
so part of: lef1
location: complement(join(1070573..1070646,1091637..1091685,1093204..1093311,1097182..1097344,1097938..1098057,1098456..1098546,1104892..1105024,1131751..>1131878,<1140743..1140946))
location: region:1070573-1140946:-1
so has part: feature:1140743-1140946:-1:exon
so has part: feature:1131751-1131878:-1:exon
so has part: feature:1104892-1105024:-1:exon
so has part: feature:1098456-1098546:-1:exon
so has part: feature:1097938-1098057:-1:exon
so has part: feature:1097182-1097344:-1:exon
so has part: feature:1093204-1093311:-1:exon
so has part: feature:1091637-1091685:-1:exon
so has part: feature:1070573-1070646:-1:exon

XP_037545961.1
type: Protein
SIO_000068: ncbiprotein

position:1070573:-1
position: 1070573
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1140946:-1
position: 1140946
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1140743-1140946:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1131751-1131878:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1104892-1105024:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1098456-1098546:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1097938-1098057:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1097182-1097344:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1093204-1093311:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1091637-1091685:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1070573-1070646:-1:exon

LOC119423001
type: Gene
subclass of: SO_0000704
RO_0002162: 451745
gene: LOC119423001
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: 1143776..1178996
location: region:1143776-1178996:1
so has part: feature:1143776-1178996:1:exon

119423001
type: Gene
SIO_000068: ncbigene

position:1143776:1
position: 1143776
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1178996:1
position: 1178996
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1143776-1178996:1:exon

LOC119423001
type: Exon
subclass of: SO_0000147
RO_0002162: 451745
gene: LOC119423001
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins
pseudo: true
SIO_010081: LOC119423001
subclass of: SO_0000673
so part of: LOC119423001
location: 1143776..1143785
location: region:1143776-1143785:1
so has part: feature:1143776-1143785:1:exon

position:1143785:1
position: 1143785
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1143776-1143785:1:exon

LOC119423001
type: Exon
subclass of: SO_0000147
RO_0002162: 451745
gene: LOC119423001
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins
pseudo: true
SIO_010081: LOC119423001
subclass of: SO_0000673
so part of: LOC119423001
location: 1144519..1144720
location: region:1144519-1144720:1
so has part: feature:1144519-1144720:1:exon

position:1144519:1
position: 1144519
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1144720:1
position: 1144720
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1144519-1144720:1:exon

LOC119423001
type: Exon
subclass of: SO_0000147
RO_0002162: 451745
gene: LOC119423001
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins
pseudo: true
SIO_010081: LOC119423001
subclass of: SO_0000673
so part of: LOC119423001
location: 1156044..1156217
location: region:1156044-1156217:1
so has part: feature:1156044-1156217:1:exon

position:1156044:1
position: 1156044
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1156217:1
position: 1156217
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1156044-1156217:1:exon

LOC119423001
type: Exon
subclass of: SO_0000147
RO_0002162: 451745
gene: LOC119423001
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins
pseudo: true
SIO_010081: LOC119423001
subclass of: SO_0000673
so part of: LOC119423001
location: 1178774..1178996
location: region:1178774-1178996:1
so has part: feature:1178774-1178996:1:exon

position:1178774:1
position: 1178774
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1178774-1178996:1:exon

LOC119423002
type: Gene
subclass of: SO_0000704
RO_0002162: 451745
gene: LOC119423002
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1207017..1245320
location: region:1207017-1245320:1
so has part: feature:1207017-1245320:1:exon
subclass of: SO_0000010

119423002
type: Gene
SIO_000068: ncbigene

position:1207017:1
position: 1207017
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1245320:1
position: 1245320
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1207017-1245320:1:exon

LOC119423002
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 451745
gene: LOC119423002
product: calcium uniporter regulatory subunit MCUb, mitochondrial
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 Proteins, and 87% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_037690413.1
SIO_010081: LOC119423002
subclass of: SO_0000673
so part of: LOC119423002
location: join(1207017..1207033,1208479..1208542,1242501..1242621,1242690..1242850,1242933..1243136,1243324..1243440,1245168..1245320)
location: region:1207017-1245320:1
so has part: feature:1207017-1207033:1:exon
so has part: feature:1208479-1208542:1:exon
so has part: feature:1242501-1242621:1:exon
so has part: feature:1242690-1242850:1:exon
so has part: feature:1242933-1243136:1:exon
so has part: feature:1243324-1243440:1:exon
so has part: feature:1245168-1245320:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1207017-1207033:1:exon

position:1207033:1
position: 1207033
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1208479-1208542:1:exon

position:1208479:1
position: 1208479
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1208542:1
position: 1208542
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1242501-1242621:1:exon

position:1242501:1
position: 1242501
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1242621:1
position: 1242621
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1242690-1242850:1:exon

position:1242690:1
position: 1242690
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1242850:1
position: 1242850
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1242933-1243136:1:exon

position:1242933:1
position: 1242933
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1243136:1
position: 1243136
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1243324-1243440:1:exon

position:1243324:1
position: 1243324
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1243440:1
position: 1243440
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1245168-1245320:1:exon

position:1245168:1
position: 1245168
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC119423002
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 451745
gene: LOC119423002
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: calcium uniporter regulatory subunit MCUb, mitochondrial
translation: MKASKRFQLALSAHGSVLREEDVLVKEKFVFPDGERVASSTLVDTLLAKDFQLSINNVLYDVHAPEKGRLSSERARELQDVKHVVHVLHTALHQPDLHLLREKQLLEKVDHLKQELAPLEQIKAQLSHTAEVQTSRLLWTGLALLSVQGGALAWLTWWVYSWDVMEPVTYFITYATSMAAFAYYVLTKQDCVYPDAQDRQFLRYFYKAARKKDFSVYKYNELKDELAQVEEDLRRLRNPNRLQLPLQQIQPKP
SIO_010081: LOC119423002
subclass of: SO_0000673
so part of: LOC119423002
location: join(1207017..1207033,1208479..1208542,1242501..1242621,1242690..1242850,1242933..1243136,1243324..1243440,1245168..1245245)
location: region:1207017-1245245:1
so has part: feature:1207017-1207033:1:exon
so has part: feature:1208479-1208542:1:exon
so has part: feature:1242501-1242621:1:exon
so has part: feature:1242690-1242850:1:exon
so has part: feature:1242933-1243136:1:exon
so has part: feature:1243324-1243440:1:exon
so has part: feature:1245168-1245245:1:exon

XP_037546341.1
type: Protein
SIO_000068: ncbiprotein

position:1245245:1
position: 1245245
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1207017-1207033:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1208479-1208542:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1242501-1242621:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1242690-1242850:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1242933-1243136:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1243324-1243440:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1245168-1245245:1:exon

LOC119422648
type: Gene
subclass of: SO_0000704
RO_0002162: 451745
gene: LOC119422648
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1246479..1251883)
location: region:1246479-1251883:-1
so has part: feature:1246479-1251883:-1:exon
subclass of: SO_0000010

119422648
type: Gene
SIO_000068: ncbigene

position:1246479:-1
position: 1246479
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1251883:-1
position: 1251883
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1246479-1251883:-1:exon

LOC119422648
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 451745
gene: LOC119422648
product: caspase-6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 29 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_037690034.1
SIO_010081: LOC119422648
subclass of: SO_0000673
so part of: LOC119422648
location: complement(join(1246479..1247346,1248774..1248924,1249012..1249187,1249290..1249366,1249582..1249731,1250073..1250115,1251529..1251570,1251845..1251883))
location: region:1246479-1251883:-1
so has part: feature:1251845-1251883:-1:exon
so has part: feature:1251529-1251570:-1:exon
so has part: feature:1250073-1250115:-1:exon
so has part: feature:1249582-1249731:-1:exon
so has part: feature:1249290-1249366:-1:exon
so has part: feature:1249012-1249187:-1:exon
so has part: feature:1248774-1248924:-1:exon
so has part: feature:1246479-1247346:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1251845-1251883:-1:exon

position:1251845:-1
position: 1251845
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1251529-1251570:-1:exon

position:1251529:-1
position: 1251529
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1251570:-1
position: 1251570
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1250073-1250115:-1:exon

position:1250073:-1
position: 1250073
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1250115:-1
position: 1250115
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1249582-1249731:-1:exon

position:1249582:-1
position: 1249582
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1249731:-1
position: 1249731
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1249290-1249366:-1:exon

position:1249290:-1
position: 1249290
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1249366:-1
position: 1249366
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1249012-1249187:-1:exon

position:1249012:-1
position: 1249012
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1249187:-1
position: 1249187
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1248774-1248924:-1:exon

position:1248774:-1
position: 1248774
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1248924:-1
position: 1248924
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1246479-1247346:-1:exon

position:1247346:-1
position: 1247346
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC119422648
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 451745
gene: LOC119422648
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: caspase-6
translation: MSHRAEDSSGGSVAADSKPASHSTACSENLTETDAFIRSSLDLDPAEEYKMGRRRRGLALIFNQERFYWRLGLNSRHGTNADSYNLERRLLELNFDVRSFENYKQVEILDKIYEAAQEDHSDADCFLLAFLSHGEDDHVFAYDGKIGIQDITSLFKGDKCKSLVGKPKIFIVQACRGDKHDVPVTPFDDVDNEVQTNEVMVDACAIHTLPAGADFIMCYSVAEGYYSHRETINGSWYVQDLCELLKKYGTSLEFTELLTLVNKKVSMRRVGNGNDRSMVGKKQVPCFASMLTKKLYFRPKK
SIO_010081: LOC119422648
subclass of: SO_0000673
so part of: LOC119422648
location: complement(join(1247111..1247346,1248774..1248924,1249012..1249187,1249290..1249366,1249582..1249731,1250073..1250115,1251529..1251570,1251845..1251875))
location: region:1247111-1251875:-1
so has part: feature:1251845-1251875:-1:exon
so has part: feature:1251529-1251570:-1:exon
so has part: feature:1250073-1250115:-1:exon
so has part: feature:1249582-1249731:-1:exon
so has part: feature:1249290-1249366:-1:exon
so has part: feature:1249012-1249187:-1:exon
so has part: feature:1248774-1248924:-1:exon
so has part: feature:1247111-1247346:-1:exon

XP_037545962.1
type: Protein
SIO_000068: ncbiprotein

position:1247111:-1
position: 1247111
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1251875:-1
position: 1251875
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1251845-1251875:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1251529-1251570:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1250073-1250115:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1249582-1249731:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1249290-1249366:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1249012-1249187:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1248774-1248924:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1247111-1247346:-1:exon

pla2g12a
type: Gene
subclass of: SO_0000704
RO_0002162: 451745
gene: pla2g12a
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1253781..1257223)
location: region:1253781-1257223:-1
so has part: feature:1253781-1257223:-1:exon
subclass of: SO_0000010

119422649
type: Gene
SIO_000068: ncbigene

position:1253781:-1
position: 1253781
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1257223:-1
position: 1257223
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1253781-1257223:-1:exon

pla2g12a
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 451745
gene: pla2g12a
product: phospholipase A2, group XIIA
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 16 Proteins, and 94% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_037690035.1
SIO_010081: pla2g12a
subclass of: SO_0000673
so part of: pla2g12a
location: complement(join(1253781..1254301,1254882..1255047,1256041..1256117,1256935..1257223))
location: region:1253781-1257223:-1
so has part: feature:1256935-1257223:-1:exon
so has part: feature:1256041-1256117:-1:exon
so has part: feature:1254882-1255047:-1:exon
so has part: feature:1253781-1254301:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1256935-1257223:-1:exon

position:1256935:-1
position: 1256935
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1256041-1256117:-1:exon

position:1256041:-1
position: 1256041
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1256117:-1
position: 1256117
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1254882-1255047:-1:exon

position:1254882:-1
position: 1254882
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1255047:-1
position: 1255047
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1253781-1254301:-1:exon

position:1254301:-1
position: 1254301
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

pla2g12a
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 451745
gene: pla2g12a
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: group XIIA secretory phospholipase A2
translation: MLTWRRHAQLSVSALSSVRSSLLCLLVLHFLPNACCCPHEPETPDWRMTLKTIRNGIHKIDTYLNAALDLFGGDDGLCHYRCSDGYKPVPRPGYRNPPPNGCGSPLFGFQFDIGIPSMTKCCNQHDRCYDTCGREKHECDEQFQECLETICRNVQRTLGLSQTVQACESAVTLLFDAVMHLGCKPYLDSQRDSCVCQYEVKREL
SIO_010081: pla2g12a
subclass of: SO_0000673
so part of: pla2g12a
location: complement(join(1254183..1254301,1254882..1255047,1256041..1256117,1256935..1257187))
location: region:1254183-1257187:-1
so has part: feature:1256935-1257187:-1:exon
so has part: feature:1256041-1256117:-1:exon
so has part: feature:1254882-1255047:-1:exon
so has part: feature:1254183-1254301:-1:exon

XP_037545963.1
type: Protein
SIO_000068: ncbiprotein

position:1254183:-1
position: 1254183
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1257187:-1
position: 1257187
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1256935-1257187:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1256041-1256117:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1254882-1255047:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1254183-1254301:-1:exon

dnajb14
type: Gene
subclass of: SO_0000704
RO_0002162: 451745
gene: dnajb14
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1258761..1268730)
location: region:1258761-1268730:-1
so has part: feature:1258761-1268730:-1:exon
subclass of: SO_0000010

119422652
type: Gene
SIO_000068: ncbigene

position:1258761:-1
position: 1258761
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1268730:-1
position: 1268730
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1258761-1268730:-1:exon

dnajb14
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 451745
gene: dnajb14
product: DnaJ heat shock protein family (Hsp40) member B14
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 31 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_037690037.1
SIO_010081: dnajb14
subclass of: SO_0000673
so part of: dnajb14
location: complement(join(1258761..1259533,1259606..1259778,1261528..1261637,1261717..1261802,1261902..1262090,1263219..1263364,1264054..1264219,1268545..1268730))
location: region:1258761-1268730:-1
so has part: feature:1268545-1268730:-1:exon
so has part: feature:1264054-1264219:-1:exon
so has part: feature:1263219-1263364:-1:exon
so has part: feature:1261902-1262090:-1:exon
so has part: feature:1261717-1261802:-1:exon
so has part: feature:1261528-1261637:-1:exon
so has part: feature:1259606-1259778:-1:exon
so has part: feature:1258761-1259533:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1268545-1268730:-1:exon

position:1268545:-1
position: 1268545
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1264054-1264219:-1:exon

position:1264054:-1
position: 1264054
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1264219:-1
position: 1264219
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1263219-1263364:-1:exon

position:1263219:-1
position: 1263219
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1263364:-1
position: 1263364
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1261902-1262090:-1:exon

position:1261902:-1
position: 1261902
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1262090:-1
position: 1262090
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1261717-1261802:-1:exon

position:1261717:-1
position: 1261717
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1261802:-1
position: 1261802
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1261528-1261637:-1:exon

position:1261528:-1
position: 1261528
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1261637:-1
position: 1261637
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1259606-1259778:-1:exon

position:1259606:-1
position: 1259606
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1259778:-1
position: 1259778
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1258761-1259533:-1:exon

position:1259533:-1
position: 1259533
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

dnajb14
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 451745
gene: dnajb14
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: dnaJ homolog subfamily B member 14
translation: MEGNRDEAEKCIKIATKALEAGDKQKAVKFLSKAEKLYPTERAKALLEALTKNGSSASNGARHRKPAECSEANGANTGGETGGSDSAKGFTQDQVEGVQRIKRCKDYYEVLGVNKEANDDELKKAYRKQALRFHPDKNHAPGATGAFKKIGNAYAVLSNPDKRRQYDLTGGEEPSSRSQSHRGGFDFHRGFEADITPEDLFNMFFGGGFPSSTAHTFTNGRTSYSHQTDSRQERTEERGDGGFSMFIQLMPIVVLILVSILSQMMVSPPPYSLYSRPSTGQTVKRQTQNLRVDYYVTRDFQSEFKSSAVHQIEKNVEDDYVTNVRNNCWKERQTKTDLLYAAKVYRDDRMRKKAELMTMDNCKEVDRLNHLFRGG
SIO_010081: dnajb14
subclass of: SO_0000673
so part of: dnajb14
location: complement(join(1259409..1259533,1259606..1259778,1261528..1261637,1261717..1261802,1261902..1262090,1263219..1263364,1264054..1264219,1268545..1268677))
location: region:1259409-1268677:-1
so has part: feature:1268545-1268677:-1:exon
so has part: feature:1264054-1264219:-1:exon
so has part: feature:1263219-1263364:-1:exon
so has part: feature:1261902-1262090:-1:exon
so has part: feature:1261717-1261802:-1:exon
so has part: feature:1261528-1261637:-1:exon
so has part: feature:1259606-1259778:-1:exon
so has part: feature:1259409-1259533:-1:exon

XP_037545965.1
type: Protein
SIO_000068: ncbiprotein

position:1259409:-1
position: 1259409
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1268677:-1
position: 1268677
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1268545-1268677:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1264054-1264219:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1263219-1263364:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1261902-1262090:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1261717-1261802:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1261528-1261637:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1259606-1259778:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1259409-1259533:-1:exon

LOC119422651
type: Gene
subclass of: SO_0000704
RO_0002162: 451745
gene: LOC119422651
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1270517..1283622)
location: region:1270517-1283622:-1
so has part: feature:1270517-1283622:-1:exon
subclass of: SO_0000010

119422651
type: Gene
SIO_000068: ncbigene

position:1270517:-1
position: 1270517
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1283622:-1
position: 1283622
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1270517-1283622:-1:exon

LOC119422651
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 451745
gene: LOC119422651
product: tetratricopeptide repeat protein 39B-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 24 Proteins, and 5% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_037690036.1
SIO_010081: LOC119422651
subclass of: SO_0000673
so part of: LOC119422651
location: complement(join(1270517..1270631,1270743..1270859,1271784..1271901,1271971..1272082,1272157..1272277,1272353..1272444,1273665..1273826,1273918..1273977,1274070..1274137,1274230..1274338,1274436..1274501,1276374..1276479,1276585..1276714,1276901..1276974,1277966..1278097,1279366..1279470,1279602..1279630,1283593..1283622))
location: region:1270517-1283622:-1
so has part: feature:1283593-1283622:-1:exon
so has part: feature:1279602-1279630:-1:exon
so has part: feature:1279366-1279470:-1:exon
so has part: feature:1277966-1278097:-1:exon
so has part: feature:1276901-1276974:-1:exon
so has part: feature:1276585-1276714:-1:exon
so has part: feature:1276374-1276479:-1:exon
so has part: feature:1274436-1274501:-1:exon
so has part: feature:1274230-1274338:-1:exon
so has part: feature:1274070-1274137:-1:exon
so has part: feature:1273918-1273977:-1:exon
so has part: feature:1273665-1273826:-1:exon
so has part: feature:1272353-1272444:-1:exon
so has part: feature:1272157-1272277:-1:exon
so has part: feature:1271971-1272082:-1:exon
so has part: feature:1271784-1271901:-1:exon
so has part: feature:1270743-1270859:-1:exon
so has part: feature:1270517-1270631:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1283593-1283622:-1:exon

position:1283593:-1
position: 1283593
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1279602-1279630:-1:exon

position:1279602:-1
position: 1279602
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1279630:-1
position: 1279630
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1279366-1279470:-1:exon

position:1279366:-1
position: 1279366
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1279470:-1
position: 1279470
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1277966-1278097:-1:exon

position:1277966:-1
position: 1277966
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1278097:-1
position: 1278097
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1276901-1276974:-1:exon

position:1276901:-1
position: 1276901
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1276974:-1
position: 1276974
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1276585-1276714:-1:exon

position:1276585:-1
position: 1276585
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1276714:-1
position: 1276714
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1276374-1276479:-1:exon

position:1276374:-1
position: 1276374
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1276479:-1
position: 1276479
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1274436-1274501:-1:exon

position:1274436:-1
position: 1274436
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1274501:-1
position: 1274501
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1274230-1274338:-1:exon

position:1274230:-1
position: 1274230
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1274338:-1
position: 1274338
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1274070-1274137:-1:exon

position:1274070:-1
position: 1274070
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1274137:-1
position: 1274137
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1273918-1273977:-1:exon

position:1273918:-1
position: 1273918
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1273977:-1
position: 1273977
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1273665-1273826:-1:exon

position:1273665:-1
position: 1273665
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1273826:-1
position: 1273826
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1272353-1272444:-1:exon

position:1272353:-1
position: 1272353
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1272444:-1
position: 1272444
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:1272157-1272277:-1:exon

position:1272157:-1
position: 1272157
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1272277:-1
position: 1272277
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:1271971-1272082:-1:exon

position:1271971:-1
position: 1271971
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1272082:-1
position: 1272082
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:1271784-1271901:-1:exon

position:1271784:-1
position: 1271784
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1271901:-1
position: 1271901
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:1270743-1270859:-1:exon

position:1270743:-1
position: 1270743
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1270859:-1
position: 1270859
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:1270517-1270631:-1:exon

position:1270631:-1
position: 1270631
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC119422651
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 451745
gene: LOC119422651
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tetratricopeptide repeat protein 39B-like
translation: MEEKHDSFQEVDPDHSEDESSPVTGLETALEECWVALHLFLNNRFADALAALRPRKSRSMYHAVGYSSILLMQAAMTFDPKDMDVAMEALRESLHICQRFRRKTGIMASLASLWNGQTVDMTEEEMHAELCYAEVLMQKAVLTFLDDSVVSFIKGGMGMRNSFQIYKNCQAVENSRTSAEKQKSTHVHFQGGVNMGIGSFNLILSLLPSNVLRLMEFLGFSGDRELGLSELREGATSDSLRSILSTLTLLMFHLYITVTLGTGDVNLTEAEALLKPFAENFPNGALVLFYTARIAVLKGAFTFAQEKFLECIATQKEWRQIHHLCYWELMWAYSFEQNWMEAYRYANLLCKENKWSQATYVFQKAAILSMLPEEEVTKLGENVATLFRQVDGLRIRLAGKSIPTEKFAAKKAQRFSSLNPGKLIVPALEMMYVWNGFKVVGKRPELTENILSTLEKAEERLRKDPSPSEFHLDDLCVVQLLKGLCLTQLGHLVQAELCLRYVISSDKNIKHDTYLVPYAMYELGLLYRQKGDVQTAITVIENAKLNYRDYSMESRLHFRIHAALNTMGSFEAKLPPSRTPA
SIO_010081: LOC119422651
subclass of: SO_0000673
so part of: LOC119422651
location: complement(join(1270517..1270631,1270743..1270859,1271784..1271901,1271971..1272082,1272157..1272277,1272353..1272444,1273665..1273826,1273918..1273977,1274070..1274137,1274230..1274338,1274436..1274501,1276374..1276479,1276585..1276714,1276901..1276974,1277966..1278097,1279366..1279470,1279602..1279630,1283593..1283622))
location: region:1270517-1283622:-1
so has part: feature:1283593-1283622:-1:exon
so has part: feature:1279602-1279630:-1:exon
so has part: feature:1279366-1279470:-1:exon
so has part: feature:1277966-1278097:-1:exon
so has part: feature:1276901-1276974:-1:exon
so has part: feature:1276585-1276714:-1:exon
so has part: feature:1276374-1276479:-1:exon
so has part: feature:1274436-1274501:-1:exon
so has part: feature:1274230-1274338:-1:exon
so has part: feature:1274070-1274137:-1:exon
so has part: feature:1273918-1273977:-1:exon
so has part: feature:1273665-1273826:-1:exon
so has part: feature:1272353-1272444:-1:exon
so has part: feature:1272157-1272277:-1:exon
so has part: feature:1271971-1272082:-1:exon
so has part: feature:1271784-1271901:-1:exon
so has part: feature:1270743-1270859:-1:exon
so has part: feature:1270517-1270631:-1:exon

XP_037545964.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1283593-1283622:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1279602-1279630:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1279366-1279470:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1277966-1278097:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1276901-1276974:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1276585-1276714:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1276374-1276479:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1274436-1274501:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1274230-1274338:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1274070-1274137:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1273918-1273977:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1273665-1273826:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1272353-1272444:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1272157-1272277:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1271971-1272082:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1271784-1271901:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1270743-1270859:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1270517-1270631:-1:exon

snapc3
type: Gene
subclass of: SO_0000704
RO_0002162: 451745
gene: snapc3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: <1292467..1297656
location: region:1292467-1297656:1
so has part: feature:1292467-1297656:1:exon
subclass of: SO_0000010

119422653
type: Gene
SIO_000068: ncbigene

position:1292467:1
position: 1292467
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

position:1297656:1
position: 1297656
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1292467-1297656:1:exon

snapc3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 451745
gene: snapc3
product: small nuclear RNA activating complex, polypeptide 3
inference: similar to RNA sequence (same species):INSD:GELZ01006070.1
exception: annotated by transcript or proteomic data
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: added 239 bases not found in genome assembly; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins, and 94% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_037690038.1
SIO_010081: snapc3
subclass of: SO_0000673
so part of: snapc3
location: join(<1292467..1292550,1292630..1292711,1292838..1292942,1293019..1293168,1293288..1293370,1295035..1295193,1297327..1297434,1297509..1297656)
location: region:1292467-1297656:1
so has part: feature:1292467-1292550:1:exon
so has part: feature:1292630-1292711:1:exon
so has part: feature:1292838-1292942:1:exon
so has part: feature:1293019-1293168:1:exon
so has part: feature:1293288-1293370:1:exon
so has part: feature:1295035-1295193:1:exon
so has part: feature:1297327-1297434:1:exon
so has part: feature:1297509-1297656:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1292467-1292550:1:exon

position:1292550:1
position: 1292550
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1292630-1292711:1:exon

position:1292630:1
position: 1292630
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1292711:1
position: 1292711
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1292838-1292942:1:exon

position:1292838:1
position: 1292838
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1292942:1
position: 1292942
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1293019-1293168:1:exon

position:1293019:1
position: 1293019
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1293168:1
position: 1293168
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1293288-1293370:1:exon

position:1293288:1
position: 1293288
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1293370:1
position: 1293370
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1295035-1295193:1:exon

position:1295035:1
position: 1295035
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1295193:1
position: 1295193
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1297327-1297434:1:exon

position:1297327:1
position: 1297327
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1297434:1
position: 1297434
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1297509-1297656:1:exon

position:1297509:1
position: 1297509
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

snapc3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 451745
gene: snapc3
inference: similar to RNA sequence (same species):INSD:GELZ01006070.1
exception: annotated by transcript or proteomic data
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: added 227 bases not found in genome assembly; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 2
product: snRNA-activating protein complex subunit 3
translation: MAGCKQVTEPSVPDYECVDVNSKPFHLGSFRAEWLRRLRAEDVSFQQDDDVSFEAKFAAEMGLGAATMAELTAVCSVGSVRCHAEDEQPDAEVVPPNPQLKTLIDRKRREDRKASRNMMHKNRHDLYADELERLTVGRTPETQADVLPEGELILTINVYYPAVFEKFNYVRPHMTLLMTGSHSLAELRDAICCVSDLHVSGEFSQTPDMAPDFISKDHFKSAFFFFEGVFYNDMRFAECQDISMTTIKWAKAHNFPSFSQAKMEDTRFVDLTVKVGYPYLYCHQGDCEHLVIITDVRLVHGNDCLDKKLYPLLTHKHRSLTRKCAVCHVFIGRWYTTNDEFAPSDPCVFCDKCFRMLHYDAQGNKLGEFLAYPYVDRGAFN
SIO_010081: snapc3
subclass of: SO_0000673
so part of: snapc3
location: join(<1292467..1292550,1292630..1292711,1292838..1292942,1293019..1293168,1293288..1293370,1295035..1295193,1297327..1297434,1297509..1297656)
location: region:1292467-1297656:1
so has part: feature:1292467-1292550:1:exon
so has part: feature:1292630-1292711:1:exon
so has part: feature:1292838-1292942:1:exon
so has part: feature:1293019-1293168:1:exon
so has part: feature:1293288-1293370:1:exon
so has part: feature:1295035-1295193:1:exon
so has part: feature:1297327-1297434:1:exon
so has part: feature:1297509-1297656:1:exon

XP_037545966.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1292467-1292550:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1292630-1292711:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1292838-1292942:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1293019-1293168:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1293288-1293370:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1295035-1295193:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1297327-1297434:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1297509-1297656:1:exon

psip1a
type: Gene
subclass of: SO_0000704
RO_0002162: 451745
gene: psip1a
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1298159..1313326)
location: region:1298159-1313326:-1
so has part: feature:1298159-1313326:-1:exon
subclass of: SO_0000010

119422655
type: Gene
SIO_000068: ncbigene

position:1298159:-1
position: 1298159
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1313326:-1
position: 1313326
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1298159-1313326:-1:exon

psip1a
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 451745
gene: psip1a
product: PC4 and SFRS1 interacting protein 1a
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_037690040.1
SIO_010081: psip1a
subclass of: SO_0000673
so part of: psip1a
location: complement(join(1298159..1298510,1299532..1299619,1301285..1301486,1301555..1301656,1302421..1302491,1302632..1302681,1306916..1307001,1307087..1307261,1307385..1307463,1307655..1307715,1307799..1307858,1308452..1308535,1308780..1308866,1311452..1311590,1312122..1312198,1312980..1313063,1313315..1313326))
location: region:1298159-1313326:-1
so has part: feature:1313315-1313326:-1:exon
so has part: feature:1312980-1313063:-1:exon
so has part: feature:1312122-1312198:-1:exon
so has part: feature:1311452-1311590:-1:exon
so has part: feature:1308780-1308866:-1:exon
so has part: feature:1308452-1308535:-1:exon
so has part: feature:1307799-1307858:-1:exon
so has part: feature:1307655-1307715:-1:exon
so has part: feature:1307385-1307463:-1:exon
so has part: feature:1307087-1307261:-1:exon
so has part: feature:1306916-1307001:-1:exon
so has part: feature:1302632-1302681:-1:exon
so has part: feature:1302421-1302491:-1:exon
so has part: feature:1301555-1301656:-1:exon
so has part: feature:1301285-1301486:-1:exon
so has part: feature:1299532-1299619:-1:exon
so has part: feature:1298159-1298510:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1313315-1313326:-1:exon

position:1313315:-1
position: 1313315
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1312980-1313063:-1:exon

position:1312980:-1
position: 1312980
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1313063:-1
position: 1313063
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1312122-1312198:-1:exon

position:1312122:-1
position: 1312122
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1312198:-1
position: 1312198
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1311452-1311590:-1:exon

position:1311452:-1
position: 1311452
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1311590:-1
position: 1311590
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1308780-1308866:-1:exon

position:1308780:-1
position: 1308780
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1308866:-1
position: 1308866
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1308452-1308535:-1:exon

position:1308452:-1
position: 1308452
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1308535:-1
position: 1308535
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1307799-1307858:-1:exon

position:1307799:-1
position: 1307799
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1307858:-1
position: 1307858
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1307655-1307715:-1:exon

position:1307655:-1
position: 1307655
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1307715:-1
position: 1307715
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1307385-1307463:-1:exon

position:1307385:-1
position: 1307385
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1307463:-1
position: 1307463
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1307087-1307261:-1:exon

position:1307087:-1
position: 1307087
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1307261:-1
position: 1307261
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1306916-1307001:-1:exon

position:1306916:-1
position: 1306916
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1307001:-1
position: 1307001
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1302632-1302681:-1:exon

position:1302632:-1
position: 1302632
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1302681:-1
position: 1302681
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1302421-1302491:-1:exon

position:1302421:-1
position: 1302421
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1302491:-1
position: 1302491
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:1301555-1301656:-1:exon

position:1301555:-1
position: 1301555
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1301656:-1
position: 1301656
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:1301285-1301486:-1:exon

position:1301285:-1
position: 1301285
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1301486:-1
position: 1301486
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:1299532-1299619:-1:exon

position:1299532:-1
position: 1299532
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1299619:-1
position: 1299619
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:1298159-1298510:-1:exon

position:1298510:-1
position: 1298510
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

psip1a
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 451745
gene: psip1a
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: PC4 and SFRS1 interacting protein 1a
translation: MAREDWKPGDLIFAKMKGYPHWPARIDEVPDGAVKPSNIKYPIFFFGTHETAFLGPKDIFPYLPNKEKYAKPNKRKGFNEGLWEIENNPKVELTAPKPVPPDSFVEKEADSGPDGDEAASKDVKSKVPGSEEEEEDEEEEEGSLMSEQGLQNQDIFVPKESTDVSKSKRGRKKKSDADQDNDKDEAPASPASPSGGEGPKKRGRKPKVVLQQDQHGSGSEIDTSESDQKRKRAPEDKQSSEEDKRKKREGSKGKDADEPEAKKKKPSRDDGSSGSDDDESQKNKSRKKVHNSEMDKDGRRWKTDEPREPVKDEVKKSDAAPKKKEMPTDLILQKLHSEIKLSLKIDNPDIQKCLDALDELGALQVTTQHLQKHSELIATLKKIRRFKASQDVVDKATMLYNKFKSMFLVGEGDCVLSQVLNKSLAEQRQHEDAKRGALKRAEHVKDTNTDKMTNGYVSPEEKKQEAEKHEDASAGEHLSASKESA
SIO_010081: psip1a
subclass of: SO_0000673
so part of: psip1a
location: complement(join(1298489..1298510,1299532..1299619,1301285..1301486,1301555..1301656,1302421..1302491,1302632..1302681,1306916..1307001,1307087..1307261,1307385..1307463,1307655..1307715,1307799..1307858,1308452..1308535,1308780..1308866,1311452..1311590,1312122..1312198,1312980..1313054))
location: region:1298489-1313054:-1
so has part: feature:1312980-1313054:-1:exon
so has part: feature:1312122-1312198:-1:exon
so has part: feature:1311452-1311590:-1:exon
so has part: feature:1308780-1308866:-1:exon
so has part: feature:1308452-1308535:-1:exon
so has part: feature:1307799-1307858:-1:exon
so has part: feature:1307655-1307715:-1:exon
so has part: feature:1307385-1307463:-1:exon
so has part: feature:1307087-1307261:-1:exon
so has part: feature:1306916-1307001:-1:exon
so has part: feature:1302632-1302681:-1:exon
so has part: feature:1302421-1302491:-1:exon
so has part: feature:1301555-1301656:-1:exon
so has part: feature:1301285-1301486:-1:exon
so has part: feature:1299532-1299619:-1:exon
so has part: feature:1298489-1298510:-1:exon

XP_037545968.1
type: Protein
SIO_000068: ncbiprotein

position:1298489:-1
position: 1298489
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1313054:-1
position: 1313054
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1312980-1313054:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1312122-1312198:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1311452-1311590:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1308780-1308866:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1308452-1308535:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1307799-1307858:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1307655-1307715:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1307385-1307463:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1307087-1307261:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1306916-1307001:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1302632-1302681:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1302421-1302491:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1301555-1301656:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1301285-1301486:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1299532-1299619:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1298489-1298510:-1:exon

bnc2
type: Gene
subclass of: SO_0000704
RO_0002162: 451745
gene: bnc2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1472534..>1489240)
location: region:1472534-1489240:-1
so has part: feature:1472534-1489240:-1:exon
subclass of: SO_0000010

119423237
type: Gene
SIO_000068: ncbigene

position:1472534:-1
position: 1472534
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1489240:-1
position: 1489240
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1472534-1489240:-1:exon

bnc2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 451745
gene: bnc2
product: basonuclin 2
inference: similar to RNA sequence (same species):INSD:GELZ01023569.1
exception: annotated by transcript or proteomic data
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: added 302 bases not found in genome assembly; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_037690642.1
SIO_010081: bnc2
subclass of: SO_0000673
so part of: bnc2
location: complement(join(1472534..1474212,1486867..>1489240))
location: region:1472534-1489240:-1
so has part: feature:1486867-1489240:-1:exon
so has part: feature:1472534-1474212:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1486867-1489240:-1:exon

position:1486867:-1
position: 1486867
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1472534-1474212:-1:exon

position:1474212:-1
position: 1474212
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

bnc2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 451745
gene: bnc2
inference: similar to RNA sequence (same species):INSD:GELZ01023569.1
exception: annotated by transcript or proteomic data
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: added 145 bases not found in genome assembly; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 3
product: zinc finger protein basonuclin-2
translation: MLYGTQAVPVRLKILLDRLFSVLKQEEVLHILHGLGWTLRDYVRGYILQDAAGKVLDRWTIMSREEEIITLQQFLRFGETKSIVELMAIQEKEGQAVTVPSSKTDSGIRTFIESNNRTRSPGLLTHLENSSPSSIHHFENIPNSLAFLLPFQYINPASAPMLGLPPNGLPLEQSALRLREPSLPNQGEHVETSESEVSLSPFRTGQSPSRGVLGGLNSTEPKTEPNSCASPISPTPSTQQAQQQQQQTQLQQTQQSQQQIQNHSQQPNSLSEHQVHHHFVKDEPSKTITHPSFSSKMHRMRRMGATSRKGRVCCNACGKTFYDKGTLKIHYNAVHLKIKHRCTIEGCNMVFSSLRSRNRHSANPNPRLHMPMLRNNRDKDLIRANSSSGTSVISNSKNSGFTLTSPGRPPLGFTTPPVDPLLQSPLQSPLVFPTLKSVQPVQPVPPFYRTLVSPADLVSPPVSLPTSPIMPSTTNSTALMDQQQQILAAVASHNNVHLSEAHRLSSAGAHQDLTTSSTDPTPKKKPRKSSMPVKIEKEVIDVADEYEDKDEDDDDNIHHNNHHHQSTLLHNNIKMNGNCNGNNSGSGTGHHSGGSGQQSPSQDEMSPGLALRGMMRQSEDECREGTGSDSRGGASELRCMDSFTSEDQDHERDFENESETSDSKMFYRDELMDAEEQQKHSRGGRGLDKEHESEAHEEAHLRKELEGNGHSSPSPHHPPIKIKEELNDPTYDMFCMSQYGLYNGGMAAAAAAAASMAALHESFISSIGYGASPPKFPSSHSPEGDPCSSPDPKICYVCKKSFKSSYSMKLHYKNVHLKEMHVCTVAGCNAAFPSRRSRDRHSSNINLHRKLLTKELDDIVLDPQLTPLPKDLRAELLAKIYAGHHFGLDPMARMGIEGVGLRPPGLNFNAHFPLSNNYPHHPLNQDFKNYHSNGLFRGQPDNYVVLDLSTTSSVQSSSSIHSSHESEEGSDEGILLDDLMEEGDETEDEGNSEGEDISHHVERRADGGHQDETGELREDERLDSSSPPFLFSPAGGGNGSSSGILCNICHKTYSNKGTLRVHYKTVHLREMHKCKVPGCNMVFSSVRSRNRHSQNPNLHKNTPFSTILD
SIO_010081: bnc2
subclass of: SO_0000673
so part of: bnc2
location: complement(join(1473402..1474212,1486867..>1489240))
location: region:1473402-1489240:-1
so has part: feature:1486867-1489240:-1:exon
so has part: feature:1473402-1474212:-1:exon

XP_037546570.1
type: Protein
SIO_000068: ncbiprotein

position:1473402:-1
position: 1473402
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1486867-1489240:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1473402-1474212:-1:exon

trnal-uag
type: Gene
subclass of: SO_0000704
RO_0002162: 451745
gene: trnal-uag
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
so part of: sequence
location: 1655991..1656073
location: region:1655991-1656073:1
so has part: feature:1655991-1656073:1:exon
subclass of: SO_0000663

119423283
type: Gene
SIO_000068: ncbigene

position:1655991:1
position: 1655991
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1656073:1
position: 1656073
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1655991-1656073:1:exon

trnal-uag
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 451745
gene: trnal-uag
product: tRNA-Leu
inference: COORDINATES: profile:tRNAscan-SE:2.0.4
note: transfer RNA leucine (anticodon UAG); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:1656025..1656027,aa:Leu,seq:tag)
SIO_010081: trnal-uag
subclass of: SO_0000673
so part of: trnal-uag
location: 1655991..1656073
location: region:1655991-1656073:1
so has part: feature:1655991-1656073:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1655991-1656073:1:exon

cntln
type: Gene
subclass of: SO_0000704
RO_0002162: 451745
gene: cntln
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1673252..1739546)
location: region:1673252-1739546:-1
so has part: feature:1673252-1739546:-1:exon
subclass of: SO_0000010

119423003
type: Gene
SIO_000068: ncbigene

position:1673252:-1
position: 1673252
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1739546:-1
position: 1739546
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1673252-1739546:-1:exon

cntln
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 451745
gene: cntln
product: centlein, centrosomal protein
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 25% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_037690415.1
SIO_010081: cntln
subclass of: SO_0000673
so part of: cntln
location: complement(join(1673252..1673785,1676881..1676978,1680594..1680694,1694131..1694247,1701951..1702072,1708114..1708233,1711669..1711803,1721482..1721673,1721825..1721987,1722854..1722987,1724123..1724302,1725175..1725303,1730042..1730126,1732793..1732881,1739304..1739394,1739484..1739546))
location: region:1673252-1739546:-1
so has part: feature:1739484-1739546:-1:exon
so has part: feature:1739304-1739394:-1:exon
so has part: feature:1732793-1732881:-1:exon
so has part: feature:1730042-1730126:-1:exon
so has part: feature:1725175-1725303:-1:exon
so has part: feature:1724123-1724302:-1:exon
so has part: feature:1722854-1722987:-1:exon
so has part: feature:1721825-1721987:-1:exon
so has part: feature:1721482-1721673:-1:exon
so has part: feature:1711669-1711803:-1:exon
so has part: feature:1708114-1708233:-1:exon
so has part: feature:1701951-1702072:-1:exon
so has part: feature:1694131-1694247:-1:exon
so has part: feature:1680594-1680694:-1:exon
so has part: feature:1676881-1676978:-1:exon
so has part: feature:1673252-1673785:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1739484-1739546:-1:exon

position:1739484:-1
position: 1739484
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1739304-1739394:-1:exon

position:1739304:-1
position: 1739304
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1739394:-1
position: 1739394
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1732793-1732881:-1:exon

position:1732793:-1
position: 1732793
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1732881:-1
position: 1732881
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1730042-1730126:-1:exon

position:1730042:-1
position: 1730042
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1730126:-1
position: 1730126
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1725175-1725303:-1:exon

position:1725175:-1
position: 1725175
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1725303:-1
position: 1725303
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1724123-1724302:-1:exon

position:1724123:-1
position: 1724123
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1724302:-1
position: 1724302
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1722854-1722987:-1:exon

position:1722854:-1
position: 1722854
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1722987:-1
position: 1722987
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1721825-1721987:-1:exon

position:1721825:-1
position: 1721825
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1721987:-1
position: 1721987
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1721482-1721673:-1:exon

position:1721482:-1
position: 1721482
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1721673:-1
position: 1721673
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1711669-1711803:-1:exon

position:1711669:-1
position: 1711669
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1711803:-1
position: 1711803
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1708114-1708233:-1:exon

position:1708114:-1
position: 1708114
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1708233:-1
position: 1708233
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1701951-1702072:-1:exon

position:1701951:-1
position: 1701951
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1702072:-1
position: 1702072
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1694131-1694247:-1:exon

position:1694131:-1
position: 1694131
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1694247:-1
position: 1694247
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:1680594-1680694:-1:exon

position:1680594:-1
position: 1680594
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1680694:-1
position: 1680694
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:1676881-1676978:-1:exon

position:1676881:-1
position: 1676881
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1676978:-1
position: 1676978
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:1673252-1673785:-1:exon

position:1673785:-1
position: 1673785
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

cntln
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 451745
gene: cntln
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: centlein
translation: MCSTNEDGRLLVLEAQVKSLSDELLQCQADKEFVWSLWKCLQMANPDLTQAVSLVVEREKQKAENKDRKVLEILQSKDCTIQELEQKVTTQQQQMNSLLQRTAVEEDRTLMKELTSLREQLVNKNQELKEMKLEHRRKEEKEQQVVQALEEEKKGLTSRCDALSADLEENQRQVARRQDESDAAQARLKDLEKKLTTAWQELSKLQGHGNSLAAQLSAKEKEVASKEQQLDQLCHDFAEVQTLYKQSTEHAAEQSHLIKQLEGLNLDTQKVLRNQEEAHTADTTSYQQLYKELSQCYQALVSGEAKLRQSHQELSIQLVQKTQHILELQAQLQHPPQHSAVYRSPNKQTNIKLVYSERAGAATQRSSPYSDQASAPGSGPRPEDKTFLRRSATRRQQGAPVQRSRSMSPASSVRGGSGRRVEAEQRIQDLEELLQLKTEENEELRKAHNQRRERLCLIQTNYKRIRDQLKEMEKSSALSGGKVHRAESWQLRQENSDAVWNELAYFKNLTKKLCTEKAGLEEEVDVLRVQAAMDRASVKELHTCLTYNHRELLQQMTEEQRVKSSAPIKACVSAGQMEQPFKKTEQLERRMQSLEEQIDGLTEEKKLLLQANKDLAQNCRTLQASMNHLRTQEAVREELARAQALAQEEQHYGEIMALKVRLATSQKEITKLHHQLLKLRRELGIVRAAGDFYRNRAAGPAQASGIANSVSSKVKLKAARHRGLLHQHRHPTVSSNQAISCQGRSPSPTKDEWEDMSVDR
SIO_010081: cntln
subclass of: SO_0000673
so part of: cntln
location: complement(join(1673252..1673785,1676881..1676978,1680594..1680694,1694131..1694247,1701951..1702072,1708114..1708233,1711669..1711803,1721482..1721673,1721825..1721987,1722854..1722987,1724123..1724302,1725175..1725303,1730042..1730126,1732793..1732881,1739304..1739387))
location: region:1673252-1739387:-1
so has part: feature:1739304-1739387:-1:exon
so has part: feature:1732793-1732881:-1:exon
so has part: feature:1730042-1730126:-1:exon
so has part: feature:1725175-1725303:-1:exon
so has part: feature:1724123-1724302:-1:exon
so has part: feature:1722854-1722987:-1:exon
so has part: feature:1721825-1721987:-1:exon
so has part: feature:1721482-1721673:-1:exon
so has part: feature:1711669-1711803:-1:exon
so has part: feature:1708114-1708233:-1:exon
so has part: feature:1701951-1702072:-1:exon
so has part: feature:1694131-1694247:-1:exon
so has part: feature:1680594-1680694:-1:exon
so has part: feature:1676881-1676978:-1:exon
so has part: feature:1673252-1673785:-1:exon

XP_037546343.1
type: Protein
SIO_000068: ncbiprotein

position:1739387:-1
position: 1739387
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1739304-1739387:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1732793-1732881:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1730042-1730126:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1725175-1725303:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1724123-1724302:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1722854-1722987:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1721825-1721987:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1721482-1721673:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1711669-1711803:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1708114-1708233:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1701951-1702072:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1694131-1694247:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1680594-1680694:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1676881-1676978:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1673252-1673785:-1:exon

trnal-uag
type: Gene
subclass of: SO_0000704
RO_0002162: 451745
gene: trnal-uag
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
so part of: sequence
location: complement(1686073..1686155)
location: region:1686073-1686155:-1
so has part: feature:1686073-1686155:-1:exon
subclass of: SO_0000663

119423290
type: Gene
SIO_000068: ncbigene

position:1686073:-1
position: 1686073
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1686155:-1
position: 1686155
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1686073-1686155:-1:exon

trnal-uag
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 451745
gene: trnal-uag
product: tRNA-Leu
inference: COORDINATES: profile:tRNAscan-SE:2.0.4
note: transfer RNA leucine (anticodon UAG); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:complement(1686119..1686121),aa:Leu, seq:tag)
SIO_010081: trnal-uag
subclass of: SO_0000673
so part of: trnal-uag
location: complement(1686073..1686155)
location: region:1686073-1686155:-1
so has part: feature:1686073-1686155:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1686073-1686155:-1:exon

LOC119423004
type: Gene
subclass of: SO_0000704
RO_0002162: 451745
gene: LOC119423004
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1898529..1923367
location: region:1898529-1923367:1
so has part: feature:1898529-1923367:1:exon
subclass of: SO_0000010

119423004
type: Gene
SIO_000068: ncbigene

position:1898529:1
position: 1898529
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1923367:1
position: 1923367
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1898529-1923367:1:exon

LOC119423004
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 451745
gene: LOC119423004
product: endophilin-A1-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 52 Proteins, and 83% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_037690416.1
SIO_010081: LOC119423004
subclass of: SO_0000673
so part of: LOC119423004
location: join(1898529..1898595,1899196..1899268,1901667..1901810,1902063..1902196,1902286..1902444,1904706..1904809,1904897..1905012,1906525..1906539,1906690..1906701,1907680..1907720,1923257..1923367)
location: region:1898529-1923367:1
so has part: feature:1898529-1898595:1:exon
so has part: feature:1899196-1899268:1:exon
so has part: feature:1901667-1901810:1:exon
so has part: feature:1902063-1902196:1:exon
so has part: feature:1902286-1902444:1:exon
so has part: feature:1904706-1904809:1:exon
so has part: feature:1904897-1905012:1:exon
so has part: feature:1906525-1906539:1:exon
so has part: feature:1906690-1906701:1:exon
so has part: feature:1907680-1907720:1:exon
so has part: feature:1923257-1923367:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1898529-1898595:1:exon

position:1898595:1
position: 1898595
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1899196-1899268:1:exon

position:1899196:1
position: 1899196
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1899268:1
position: 1899268
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1901667-1901810:1:exon

position:1901667:1
position: 1901667
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1901810:1
position: 1901810
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1902063-1902196:1:exon

position:1902063:1
position: 1902063
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1902196:1
position: 1902196
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1902286-1902444:1:exon

position:1902286:1
position: 1902286
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1902444:1
position: 1902444
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1904706-1904809:1:exon

position:1904706:1
position: 1904706
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1904809:1
position: 1904809
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1904897-1905012:1:exon

position:1904897:1
position: 1904897
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1905012:1
position: 1905012
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1906525-1906539:1:exon

position:1906525:1
position: 1906525
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1906539:1
position: 1906539
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1906690-1906701:1:exon

position:1906690:1
position: 1906690
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1906701:1
position: 1906701
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1907680-1907720:1:exon

position:1907680:1
position: 1907680
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1907720:1
position: 1907720
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1923257-1923367:1:exon

position:1923257:1
position: 1923257
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC119423004
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 451745
gene: LOC119423004
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: endophilin-A1-like
translation: MEKRVDSTARAVLDIMTKTTEYLQPNPATRAKMTMMNSMSRMRGQEKGPGYTQTETMLGESMQRFGRELGEESTFGVALIDVGEAMRELGEVKDALDMEVKQNFIDPMQNLHEKDIKEIQHHLKKLEGRRLDFDYKKKRQGKVTDDEIKQALEKFDDSKEIAEQSMFNLLESDIEQVSQLAALVHAQVQYHTRAAEILTQLSSKIDERIRDTSVKPRKEFVPKPRTSLELCISENLNGGIHGARSPGARSPARSPGDSSLQRQSQRPEMVPSAGQLMEAMRVKMKERKVLTEELAALAAPVSENP
SIO_010081: LOC119423004
subclass of: SO_0000673
so part of: LOC119423004
location: join(1898587..1898595,1899196..1899268,1901667..1901810,1902063..1902196,1902286..1902444,1904706..1904809,1904897..1905012,1906525..1906539,1906690..1906701,1907680..1907720,1923257..1923367)
location: region:1898587-1923367:1
so has part: feature:1898587-1898595:1:exon
so has part: feature:1899196-1899268:1:exon
so has part: feature:1901667-1901810:1:exon
so has part: feature:1902063-1902196:1:exon
so has part: feature:1902286-1902444:1:exon
so has part: feature:1904706-1904809:1:exon
so has part: feature:1904897-1905012:1:exon
so has part: feature:1906525-1906539:1:exon
so has part: feature:1906690-1906701:1:exon
so has part: feature:1907680-1907720:1:exon
so has part: feature:1923257-1923367:1:exon

XP_037546344.1
type: Protein
SIO_000068: ncbiprotein

position:1898587:1
position: 1898587
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1898587-1898595:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1899196-1899268:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1901667-1901810:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1902063-1902196:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1902286-1902444:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1904706-1904809:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1904897-1905012:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1906525-1906539:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1906690-1906701:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1907680-1907720:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1923257-1923367:1:exon

LOC119423239
type: Gene
subclass of: SO_0000704
RO_0002162: 451745
gene: LOC119423239
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1948206..1966079
location: region:1948206-1966079:1
so has part: feature:1948206-1966079:1:exon
subclass of: SO_0000010

119423239
type: Gene
SIO_000068: ncbigene

position:1948206:1
position: 1948206
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1966079:1
position: 1966079
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1948206-1966079:1:exon

LOC119423239
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 451745
gene: LOC119423239
product: endophilin-A1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 33 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_037690643.1
SIO_010081: LOC119423239
subclass of: SO_0000673
so part of: LOC119423239
location: join(1948206..1948272,1948873..1948945,1951260..1951403,1951656..1951789,1951879..1952037,1954269..1954372,1954460..1954575,1956088..1956111,1956253..1956264,1961264..1961269,1963673..1963690,1963800..1966079)
location: region:1948206-1966079:1
so has part: feature:1948206-1948272:1:exon
so has part: feature:1948873-1948945:1:exon
so has part: feature:1951260-1951403:1:exon
so has part: feature:1951656-1951789:1:exon
so has part: feature:1951879-1952037:1:exon
so has part: feature:1954269-1954372:1:exon
so has part: feature:1954460-1954575:1:exon
so has part: feature:1956088-1956111:1:exon
so has part: feature:1956253-1956264:1:exon
so has part: feature:1961264-1961269:1:exon
so has part: feature:1963673-1963690:1:exon
so has part: feature:1963800-1966079:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1948206-1948272:1:exon

position:1948272:1
position: 1948272
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1948873-1948945:1:exon

position:1948873:1
position: 1948873
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1948945:1
position: 1948945
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1951260-1951403:1:exon

position:1951260:1
position: 1951260
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1951403:1
position: 1951403
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1951656-1951789:1:exon

position:1951656:1
position: 1951656
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1951789:1
position: 1951789
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1951879-1952037:1:exon

position:1951879:1
position: 1951879
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1952037:1
position: 1952037
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1954269-1954372:1:exon

position:1954269:1
position: 1954269
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1954372:1
position: 1954372
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1954460-1954575:1:exon

position:1954460:1
position: 1954460
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1954575:1
position: 1954575
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1956088-1956111:1:exon

position:1956088:1
position: 1956088
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1956111:1
position: 1956111
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1956253-1956264:1:exon

position:1956253:1
position: 1956253
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1956264:1
position: 1956264
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1961264-1961269:1:exon

position:1961264:1
position: 1961264
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1961269:1
position: 1961269
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1963673-1963690:1:exon

position:1963673:1
position: 1963673
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1963690:1
position: 1963690
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1963800-1966079:1:exon

position:1963800:1
position: 1963800
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC119423239
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 451745
gene: LOC119423239
product: endophilin-A1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_037690644.1
SIO_010081: LOC119423239
subclass of: SO_0000673
so part of: LOC119423239
location: join(1948206..1948272,1948873..1948945,1951260..1951403,1951656..1951789,1951879..1952037,1954269..1954372,1954460..1954575,1956088..1956102,1956253..1956264,1961264..1961269,1963673..1963690,1963800..1966079)
location: region:1948206-1966079:1
so has part: feature:1948206-1948272:1:exon
so has part: feature:1948873-1948945:1:exon
so has part: feature:1951260-1951403:1:exon
so has part: feature:1951656-1951789:1:exon
so has part: feature:1951879-1952037:1:exon
so has part: feature:1954269-1954372:1:exon
so has part: feature:1954460-1954575:1:exon
so has part: feature:1956088-1956102:1:exon
so has part: feature:1956253-1956264:1:exon
so has part: feature:1961264-1961269:1:exon
so has part: feature:1963673-1963690:1:exon
so has part: feature:1963800-1966079:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1948206-1948272:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1948873-1948945:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1951260-1951403:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1951656-1951789:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1951879-1952037:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1954269-1954372:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1954460-1954575:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1956088-1956102:1:exon

position:1956102:1
position: 1956102
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1956253-1956264:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1961264-1961269:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1963673-1963690:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1963800-1966079:1:exon

LOC119423239
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 451745
gene: LOC119423239
product: endophilin-A1, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_037690645.1
SIO_010081: LOC119423239
subclass of: SO_0000673
so part of: LOC119423239
location: join(1948206..1948272,1948873..1948945,1951260..1951403,1951656..1951789,1951879..1952037,1954269..1954372,1954460..1954575,1956088..1956102,1961264..1961269,1963673..1963690,1963800..1966079)
location: region:1948206-1966079:1
so has part: feature:1948206-1948272:1:exon
so has part: feature:1948873-1948945:1:exon
so has part: feature:1951260-1951403:1:exon
so has part: feature:1951656-1951789:1:exon
so has part: feature:1951879-1952037:1:exon
so has part: feature:1954269-1954372:1:exon
so has part: feature:1954460-1954575:1:exon
so has part: feature:1956088-1956102:1:exon
so has part: feature:1961264-1961269:1:exon
so has part: feature:1963673-1963690:1:exon
so has part: feature:1963800-1966079:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1948206-1948272:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1948873-1948945:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1951260-1951403:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1951656-1951789:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1951879-1952037:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1954269-1954372:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1954460-1954575:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1956088-1956102:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1961264-1961269:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1963673-1963690:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1963800-1966079:1:exon

LOC119423239
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 451745
gene: LOC119423239
product: endophilin-A1, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_037690646.1
SIO_010081: LOC119423239
subclass of: SO_0000673
so part of: LOC119423239
location: join(1948206..1948272,1948873..1948945,1951260..1951403,1951656..1951789,1951879..1952037,1954269..1954372,1954460..1954575,1963679..1963690,1963800..1966079)
location: region:1948206-1966079:1
so has part: feature:1948206-1948272:1:exon
so has part: feature:1948873-1948945:1:exon
so has part: feature:1951260-1951403:1:exon
so has part: feature:1951656-1951789:1:exon
so has part: feature:1951879-1952037:1:exon
so has part: feature:1954269-1954372:1:exon
so has part: feature:1954460-1954575:1:exon
so has part: feature:1963679-1963690:1:exon
so has part: feature:1963800-1966079:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1948206-1948272:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1948873-1948945:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1951260-1951403:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1951656-1951789:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1951879-1952037:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1954269-1954372:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1954460-1954575:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1963679-1963690:1:exon

position:1963679:1
position: 1963679
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1963800-1966079:1:exon

LOC119423239
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 451745
gene: LOC119423239
product: endophilin-A1, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 36 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_037690648.1
SIO_010081: LOC119423239
subclass of: SO_0000673
so part of: LOC119423239
location: join(1948206..1948272,1948873..1948945,1951260..1951403,1951656..1951789,1951879..1952037,1954269..1954372,1954460..1954575,1963800..1966079)
location: region:1948206-1966079:1
so has part: feature:1948206-1948272:1:exon
so has part: feature:1948873-1948945:1:exon
so has part: feature:1951260-1951403:1:exon
so has part: feature:1951656-1951789:1:exon
so has part: feature:1951879-1952037:1:exon
so has part: feature:1954269-1954372:1:exon
so has part: feature:1954460-1954575:1:exon
so has part: feature:1963800-1966079:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1948206-1948272:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1948873-1948945:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1951260-1951403:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1951656-1951789:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1951879-1952037:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1954269-1954372:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1954460-1954575:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1963800-1966079:1:exon

LOC119423239
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 451745
gene: LOC119423239
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: endophilin-A1 isoform X1
translation: MEKRVDSTARAVLDIMTKTTEYLQPNPATRAKMTMMNSMSRMRGQEKGPGYTQTETMLGESMQRFGRELGEESTFGVALIDVGEAMRELGEVKDALDMEVKQNFIDPMQNLHEKDIKEIQHHLKKLEGRRLDFDYKKKRQGKVTDDEIKQALEKFDDSKEIAEQSMFNLLESDIEQVSQLAALVHAQVQYHTRAAEILTQLSSKIDERIRDTSVKPRKEFVPKPRTSLELCISENLNGGIHGARSPGARSPGEPARSPARSPARSPAPLDQPSCRALYDFDPENEGELGFKEGDIITLTNKIDDNWYEGMLHGNSGFFPINYVDILVPLPQ
SIO_010081: LOC119423239
subclass of: SO_0000673
so part of: LOC119423239
location: join(1948264..1948272,1948873..1948945,1951260..1951403,1951656..1951789,1951879..1952037,1954269..1954372,1954460..1954575,1956088..1956111,1956253..1956264,1961264..1961269,1963673..1963690,1963800..1963996)
location: region:1948264-1963996:1
so has part: feature:1948264-1948272:1:exon
so has part: feature:1948873-1948945:1:exon
so has part: feature:1951260-1951403:1:exon
so has part: feature:1951656-1951789:1:exon
so has part: feature:1951879-1952037:1:exon
so has part: feature:1954269-1954372:1:exon
so has part: feature:1954460-1954575:1:exon
so has part: feature:1956088-1956111:1:exon
so has part: feature:1956253-1956264:1:exon
so has part: feature:1961264-1961269:1:exon
so has part: feature:1963673-1963690:1:exon
so has part: feature:1963800-1963996:1:exon

XP_037546571.1
type: Protein
SIO_000068: ncbiprotein

position:1948264:1
position: 1948264
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1963996:1
position: 1963996
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1948264-1948272:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1948873-1948945:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1951260-1951403:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1951656-1951789:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1951879-1952037:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1954269-1954372:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1954460-1954575:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1956088-1956111:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1956253-1956264:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1961264-1961269:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1963673-1963690:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1963800-1963996:1:exon

LOC119423239
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 451745
gene: LOC119423239
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: endophilin-A1 isoform X2
translation: MEKRVDSTARAVLDIMTKTTEYLQPNPATRAKMTMMNSMSRMRGQEKGPGYTQTETMLGESMQRFGRELGEESTFGVALIDVGEAMRELGEVKDALDMEVKQNFIDPMQNLHEKDIKEIQHHLKKLEGRRLDFDYKKKRQGKVTDDEIKQALEKFDDSKEIAEQSMFNLLESDIEQVSQLAALVHAQVQYHTRAAEILTQLSSKIDERIRDTSVKPRKEFVPKPRTSLELCISENLNGGIHGARSPGARSPARSPARSPARSPAPLDQPSCRALYDFDPENEGELGFKEGDIITLTNKIDDNWYEGMLHGNSGFFPINYVDILVPLPQ
SIO_010081: LOC119423239
subclass of: SO_0000673
so part of: LOC119423239
location: join(1948264..1948272,1948873..1948945,1951260..1951403,1951656..1951789,1951879..1952037,1954269..1954372,1954460..1954575,1956088..1956102,1956253..1956264,1961264..1961269,1963673..1963690,1963800..1963996)
location: region:1948264-1963996:1
so has part: feature:1948264-1948272:1:exon
so has part: feature:1948873-1948945:1:exon
so has part: feature:1951260-1951403:1:exon
so has part: feature:1951656-1951789:1:exon
so has part: feature:1951879-1952037:1:exon
so has part: feature:1954269-1954372:1:exon
so has part: feature:1954460-1954575:1:exon
so has part: feature:1956088-1956102:1:exon
so has part: feature:1956253-1956264:1:exon
so has part: feature:1961264-1961269:1:exon
so has part: feature:1963673-1963690:1:exon
so has part: feature:1963800-1963996:1:exon

XP_037546572.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1948264-1948272:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1948873-1948945:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1951260-1951403:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1951656-1951789:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1951879-1952037:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1954269-1954372:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1954460-1954575:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1956088-1956102:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1956253-1956264:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1961264-1961269:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1963673-1963690:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1963800-1963996:1:exon

LOC119423239
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 451745
gene: LOC119423239
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: endophilin-A1 isoform X3
translation: MEKRVDSTARAVLDIMTKTTEYLQPNPATRAKMTMMNSMSRMRGQEKGPGYTQTETMLGESMQRFGRELGEESTFGVALIDVGEAMRELGEVKDALDMEVKQNFIDPMQNLHEKDIKEIQHHLKKLEGRRLDFDYKKKRQGKVTDDEIKQALEKFDDSKEIAEQSMFNLLESDIEQVSQLAALVHAQVQYHTRAAEILTQLSSKIDERIRDTSVKPRKEFVPKPRTSLELCISENLNGGIHGARSPGARSPARSPARSPAPLDQPSCRALYDFDPENEGELGFKEGDIITLTNKIDDNWYEGMLHGNSGFFPINYVDILVPLPQ
SIO_010081: LOC119423239
subclass of: SO_0000673
so part of: LOC119423239
location: join(1948264..1948272,1948873..1948945,1951260..1951403,1951656..1951789,1951879..1952037,1954269..1954372,1954460..1954575,1956088..1956102,1961264..1961269,1963673..1963690,1963800..1963996)
location: region:1948264-1963996:1
so has part: feature:1948264-1948272:1:exon
so has part: feature:1948873-1948945:1:exon
so has part: feature:1951260-1951403:1:exon
so has part: feature:1951656-1951789:1:exon
so has part: feature:1951879-1952037:1:exon
so has part: feature:1954269-1954372:1:exon
so has part: feature:1954460-1954575:1:exon
so has part: feature:1956088-1956102:1:exon
so has part: feature:1961264-1961269:1:exon
so has part: feature:1963673-1963690:1:exon
so has part: feature:1963800-1963996:1:exon

XP_037546573.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1948264-1948272:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1948873-1948945:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1951260-1951403:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1951656-1951789:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1951879-1952037:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1954269-1954372:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1954460-1954575:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1956088-1956102:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1961264-1961269:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1963673-1963690:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1963800-1963996:1:exon

LOC119423239
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 451745
gene: LOC119423239
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: endophilin-A1 isoform X4
translation: MEKRVDSTARAVLDIMTKTTEYLQPNPATRAKMTMMNSMSRMRGQEKGPGYTQTETMLGESMQRFGRELGEESTFGVALIDVGEAMRELGEVKDALDMEVKQNFIDPMQNLHEKDIKEIQHHLKKLEGRRLDFDYKKKRQGKVTDDEIKQALEKFDDSKEIAEQSMFNLLESDIEQVSQLAALVHAQVQYHTRAAEILTQLSSKIDERIRDTSVKPRKEFVPKPRTSLELCISENLNGGIHGARSPARSPAPLDQPSCRALYDFDPENEGELGFKEGDIITLTNKIDDNWYEGMLHGNSGFFPINYVDILVPLPQ
SIO_010081: LOC119423239
subclass of: SO_0000673
so part of: LOC119423239
location: join(1948264..1948272,1948873..1948945,1951260..1951403,1951656..1951789,1951879..1952037,1954269..1954372,1954460..1954575,1963679..1963690,1963800..1963996)
location: region:1948264-1963996:1
so has part: feature:1948264-1948272:1:exon
so has part: feature:1948873-1948945:1:exon
so has part: feature:1951260-1951403:1:exon
so has part: feature:1951656-1951789:1:exon
so has part: feature:1951879-1952037:1:exon
so has part: feature:1954269-1954372:1:exon
so has part: feature:1954460-1954575:1:exon
so has part: feature:1963679-1963690:1:exon
so has part: feature:1963800-1963996:1:exon

XP_037546574.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1948264-1948272:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1948873-1948945:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1951260-1951403:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1951656-1951789:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1951879-1952037:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1954269-1954372:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1954460-1954575:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1963679-1963690:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1963800-1963996:1:exon

LOC119423239
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 451745
gene: LOC119423239
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: endophilin-A1 isoform X5
translation: MEKRVDSTARAVLDIMTKTTEYLQPNPATRAKMTMMNSMSRMRGQEKGPGYTQTETMLGESMQRFGRELGEESTFGVALIDVGEAMRELGEVKDALDMEVKQNFIDPMQNLHEKDIKEIQHHLKKLEGRRLDFDYKKKRQGKVTDDEIKQALEKFDDSKEIAEQSMFNLLESDIEQVSQLAALVHAQVQYHTRAAEILTQLSSKIDERIRDTSVKPRKEFVPKPRTSLELCISENLNGGIHGARSPAPLDQPSCRALYDFDPENEGELGFKEGDIITLTNKIDDNWYEGMLHGNSGFFPINYVDILVPLPQ
SIO_010081: LOC119423239
subclass of: SO_0000673
so part of: LOC119423239
location: join(1948264..1948272,1948873..1948945,1951260..1951403,1951656..1951789,1951879..1952037,1954269..1954372,1954460..1954575,1963800..1963996)
location: region:1948264-1963996:1
so has part: feature:1948264-1948272:1:exon
so has part: feature:1948873-1948945:1:exon
so has part: feature:1951260-1951403:1:exon
so has part: feature:1951656-1951789:1:exon
so has part: feature:1951879-1952037:1:exon
so has part: feature:1954269-1954372:1:exon
so has part: feature:1954460-1954575:1:exon
so has part: feature:1963800-1963996:1:exon

XP_037546576.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1948264-1948272:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1948873-1948945:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1951260-1951403:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1951656-1951789:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1951879-1952037:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1954269-1954372:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1954460-1954575:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1963800-1963996:1:exon

foxe1
type: Gene
subclass of: SO_0000704
RO_0002162: 451745
gene: foxe1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1993653..1995056
location: region:1993653-1995056:1
so has part: feature:1993653-1995056:1:exon
subclass of: SO_0000010

119422656
type: Gene
SIO_000068: ncbigene

position:1993653:1
position: 1993653
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1995056:1
position: 1995056
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1993653-1995056:1:exon

foxe1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 451745
gene: foxe1
product: forkhead box E1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 18 Proteins, and 94% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_037690041.1
SIO_010081: foxe1
subclass of: SO_0000673
so part of: foxe1
location: 1993653..1995056
location: region:1993653-1995056:1
so has part: feature:1993653-1995056:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1993653-1995056:1:exon

foxe1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 451745
gene: foxe1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: forkhead box protein E1
translation: MPVVKVEKDSSADTTVPSSNPSPQTEEQPRGRRRKRPLERGKPPYSYIALISMAIANSPDRKLTLGGIYKFITERFPFYRDNSKKWQNSIRHNLTLNDCFIKIPREPGRPGKGNYWALDPNAEDMFESGSFLRRRKRFKRCDLSTYSSYVHEAPVFSPVQITRSAAYSNTVYPNMTVSPTYSQQLPSAYYPSSSPPGFGPGQTRMFSINNIIGHPASASMMAGQGSEMMQQPSRSFSPEGLPNGPNPCSLGGSGFQTQPCGGALPPRSSAHPGFTYSGPSSHPHHPHQGSYGQGHRQGYTAAGRIQTSPQGSAEALEHYGRASPVQLGSFSQYNSTAGPVSNSGGYLRHPPYPGSMERFVPAI
SIO_010081: foxe1
subclass of: SO_0000673
so part of: foxe1
location: 1993965..1995056
location: region:1993965-1995056:1
so has part: feature:1993965-1995056:1:exon

XP_037545969.1
type: Protein
SIO_000068: ncbiprotein

position:1993965:1
position: 1993965
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1993965-1995056:1:exon

LOC119422356
type: Gene
subclass of: SO_0000704
RO_0002162: 451745
gene: LOC119422356
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1997714..1999779)
location: region:1997714-1999779:-1
so has part: feature:1997714-1999779:-1:exon
subclass of: SO_0000011

119422356
type: Gene
SIO_000068: ncbigene

position:1997714:-1
position: 1997714
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1999779:-1
position: 1999779
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1997714-1999779:-1:exon

LOC119422356
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 451745
nc RNA class: lncRNA
gene: LOC119422356
product: uncharacterized LOC119422356
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XR_005187420.1
SIO_010081: LOC119422356
subclass of: SO_0000673
so part of: LOC119422356
location: complement(join(1997714..1997786,1997860..1997992,1999711..1999779))
location: region:1997714-1999779:-1
so has part: feature:1999711-1999779:-1:exon
so has part: feature:1997860-1997992:-1:exon
so has part: feature:1997714-1997786:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1999711-1999779:-1:exon

position:1999711:-1
position: 1999711
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1997860-1997992:-1:exon

position:1997860:-1
position: 1997860
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1997992:-1
position: 1997992
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1997714-1997786:-1:exon

position:1997786:-1
position: 1997786
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

spag5
type: Gene
subclass of: SO_0000704
RO_0002162: 451745
gene: spag5
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2000538..2002669)
location: region:2000538-2002669:-1
so has part: feature:2000538-2002669:-1:exon
subclass of: SO_0000010

119423007
type: Gene
SIO_000068: ncbigene

position:2000538:-1
position: 2000538
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2002669:-1
position: 2002669
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2000538-2002669:-1:exon

spag5
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 451745
gene: spag5
product: sperm associated antigen 5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 58% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_037690419.1
SIO_010081: spag5
subclass of: SO_0000673
so part of: spag5
location: complement(join(2000538..2000742,2000907..2001040,2002416..2002590,2002641..2002669))
location: region:2000538-2002669:-1
so has part: feature:2002641-2002669:-1:exon
so has part: feature:2002416-2002590:-1:exon
so has part: feature:2000907-2001040:-1:exon
so has part: feature:2000538-2000742:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2002641-2002669:-1:exon

position:2002641:-1
position: 2002641
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2002416-2002590:-1:exon

position:2002416:-1
position: 2002416
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2002590:-1
position: 2002590
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2000907-2001040:-1:exon

position:2000907:-1
position: 2000907
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2001040:-1
position: 2001040
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2000538-2000742:-1:exon

position:2000742:-1
position: 2000742
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

spag5
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 451745
gene: spag5
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: sperm-associated antigen 5
translation: MSGPWALGFQMEASLQASEERERELRRALSRSEHQVAQLQTLSQSQGLQVQQLQESCAQLGGVQEMNEFLQMENELVREQVAEGERMLTTNLQALRDRNIAYEDLTGEVCKLQAENRSLSDELKSSSSAADAARGELEEKLAQAVTEITLLHHTLRGLTNELHASLMDQVTTNAQPLVLL
SIO_010081: spag5
subclass of: SO_0000673
so part of: spag5
location: complement(join(2000538..2000742,2000907..2001040,2002416..2002590,2002641..2002669))
location: region:2000538-2002669:-1
so has part: feature:2002641-2002669:-1:exon
so has part: feature:2002416-2002590:-1:exon
so has part: feature:2000907-2001040:-1:exon
so has part: feature:2000538-2000742:-1:exon

XP_037546347.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2002641-2002669:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2002416-2002590:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2000907-2001040:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2000538-2000742:-1:exon

LOC119422573
type: Gene
subclass of: SO_0000704
RO_0002162: 451745
gene: LOC119422573
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2003114..2003545)
location: region:2003114-2003545:-1
so has part: feature:2003114-2003545:-1:exon
subclass of: SO_0000011

119422573
type: Gene
SIO_000068: ncbigene

position:2003114:-1
position: 2003114
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2003545:-1
position: 2003545
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2003114-2003545:-1:exon

LOC119422573
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 451745
nc RNA class: lncRNA
gene: LOC119422573
product: uncharacterized LOC119422573
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XR_005187424.1
SIO_010081: LOC119422573
subclass of: SO_0000673
so part of: LOC119422573
location: complement(join(2003114..2003167,2003275..2003368,2003458..2003545))
location: region:2003114-2003545:-1
so has part: feature:2003458-2003545:-1:exon
so has part: feature:2003275-2003368:-1:exon
so has part: feature:2003114-2003167:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2003458-2003545:-1:exon

position:2003458:-1
position: 2003458
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2003275-2003368:-1:exon

position:2003275:-1
position: 2003275
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2003368:-1
position: 2003368
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2003114-2003167:-1:exon

position:2003167:-1
position: 2003167
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

trmo
type: Gene
subclass of: SO_0000704
RO_0002162: 451745
gene: trmo
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2011199..>2015777)
location: region:2011199-2015777:-1
so has part: feature:2011199-2015777:-1:exon
subclass of: SO_0000010

119423008
type: Gene
SIO_000068: ncbigene

position:2011199:-1
position: 2011199
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2015777:-1
position: 2015777
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2011199-2015777:-1:exon

trmo
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 451745
gene: trmo
product: tRNA methyltransferase O
inference: similar to RNA sequence (same species):INSD:GELZ01008866.1
exception: annotated by transcript or proteomic data
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: added 309 bases not found in genome assembly; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 Proteins, and 95% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_037690420.1
SIO_010081: trmo
subclass of: SO_0000673
so part of: trmo
location: complement(join(2011199..2011443,2011606..2012145,2014432..2014589,2015681..>2015777))
location: region:2011199-2015777:-1
so has part: feature:2015681-2015777:-1:exon
so has part: feature:2014432-2014589:-1:exon
so has part: feature:2011606-2012145:-1:exon
so has part: feature:2011199-2011443:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2015681-2015777:-1:exon

position:2015681:-1
position: 2015681
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2014432-2014589:-1:exon

position:2014432:-1
position: 2014432
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2014589:-1
position: 2014589
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2011606-2012145:-1:exon

position:2011606:-1
position: 2011606
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2012145:-1
position: 2012145
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2011199-2011443:-1:exon

position:2011443:-1
position: 2011443
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

trmo
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 451745
gene: trmo
inference: similar to RNA sequence (same species):INSD:GELZ01008866.1
exception: annotated by transcript or proteomic data
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: added 304 bases not found in genome assembly; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 3
product: tRNA (adenine(37)-N6)-methyltransferase
translation: MSPPCGCCRENMNKLNQQVSVMRNEIKNLRQVLDSSVRAHRKQLACVQAAVSKMTSCQDQDQDQTPTPPQSALEQGVIQTTPIGYITSCFSMKNGTPRQPTICSPSRAQLRIQQSVFNNAEHALLGLEPYSHVWIIFLFHKNGRLSSKAKVKPPRLDGQRVGVYSTRSPHRPNALGLTLAQLDKISGDTLHLSGIDMIDGTPVLDIKPYIPEYDSPDRRMALASQLFEPHSGPPAVSVQNAPFNTEDKRTSDDDDGGGILEEGRSETDTCFQNAPSADAQFVLLKETCRVLEEVRCFISQDERKSPKRACSTSAPATSPTERLCRGEEASATVAGWIREPPVACLDVRFTPHAERQLAEFLPAHLAGLPESKRPSFKFLRSPEEAVAAIRGVLSADPRSVYRRSRCRDRLFFFTIDTADVTCWFGQGFVEVLQVRPVEDHKDEEFHT
SIO_010081: trmo
subclass of: SO_0000673
so part of: trmo
location: complement(join(2011199..2011443,2011606..2012145,2014432..2014589,2015681..>2015777))
location: region:2011199-2015777:-1
so has part: feature:2015681-2015777:-1:exon
so has part: feature:2014432-2014589:-1:exon
so has part: feature:2011606-2012145:-1:exon
so has part: feature:2011199-2011443:-1:exon

XP_037546348.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2015681-2015777:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2014432-2014589:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2011606-2012145:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2011199-2011443:-1:exon

anp32b
type: Gene
subclass of: SO_0000704
RO_0002162: 451745
gene: anp32b
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2019016..2026231
location: region:2019016-2026231:1
so has part: feature:2019016-2026231:1:exon
subclass of: SO_0000010

119422657
type: Gene
SIO_000068: ncbigene

position:2019016:1
position: 2019016
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2026231:1
position: 2026231
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2019016-2026231:1:exon

anp32b
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 451745
gene: anp32b
product: acidic (leucine-rich) nuclear phosphoprotein 32 family, member B
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 23 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_037690042.1
SIO_010081: anp32b
subclass of: SO_0000673
so part of: anp32b
location: join(2019016..2019235,2021658..2021807,2021880..2022002,2022327..2022513,2022732..2022844,2022917..2022971,2026122..2026231)
location: region:2019016-2026231:1
so has part: feature:2019016-2019235:1:exon
so has part: feature:2021658-2021807:1:exon
so has part: feature:2021880-2022002:1:exon
so has part: feature:2022327-2022513:1:exon
so has part: feature:2022732-2022844:1:exon
so has part: feature:2022917-2022971:1:exon
so has part: feature:2026122-2026231:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2019016-2019235:1:exon

position:2019235:1
position: 2019235
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2021658-2021807:1:exon

position:2021658:1
position: 2021658
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2021807:1
position: 2021807
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2021880-2022002:1:exon

position:2021880:1
position: 2021880
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2022002:1
position: 2022002
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2022327-2022513:1:exon

position:2022327:1
position: 2022327
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2022513:1
position: 2022513
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2022732-2022844:1:exon

position:2022732:1
position: 2022732
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2022844:1
position: 2022844
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2022917-2022971:1:exon

position:2022917:1
position: 2022917
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2022971:1
position: 2022971
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:2026122-2026231:1:exon

position:2026122:1
position: 2026122
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

anp32b
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 451745
gene: anp32b
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: acidic leucine-rich nuclear phosphoprotein 32 family member B
translation: MEMKKRIHLELRNRTPSDVQELVLDNCRSLEGKIEGLTAEFVNLEFLSLINVGLMSVSNLPKLGKLKKLELSDNRISGGLDALAEKLPSLTHLNLSGNKLKDISTLEPLKKLANLKSLDLFNCEVTNLNDYRESVFKLLPQLTYLDGYDMEDMEASDSDGEVEDGVDEEDEEEEDEDGEEEDFDEDEDDEEDEEEVGEEDDEEVSGEDEEEEFGHEGEVEDEDEDEEEAETKKGEKRKRDPEDDEDDDDEDDD
SIO_010081: anp32b
subclass of: SO_0000673
so part of: anp32b
location: join(2019182..2019235,2021658..2021807,2021880..2022002,2022327..2022513,2022732..2022844,2022917..2022971,2026122..2026201)
location: region:2019182-2026201:1
so has part: feature:2019182-2019235:1:exon
so has part: feature:2021658-2021807:1:exon
so has part: feature:2021880-2022002:1:exon
so has part: feature:2022327-2022513:1:exon
so has part: feature:2022732-2022844:1:exon
so has part: feature:2022917-2022971:1:exon
so has part: feature:2026122-2026201:1:exon

XP_037545970.1
type: Protein
SIO_000068: ncbiprotein

position:2019182:1
position: 2019182
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2026201:1
position: 2026201
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2019182-2019235:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2021658-2021807:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2021880-2022002:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2022327-2022513:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2022732-2022844:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2022917-2022971:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2026122-2026201:1:exon

LOC119422931
type: Gene
subclass of: SO_0000704
RO_0002162: 451745
gene: LOC119422931
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2029913..>2030392
location: region:2029913-2030392:1
so has part: feature:2029913-2030392:1:exon
subclass of: SO_0000010

119422931
type: Gene
SIO_000068: ncbigene

position:2029913:1
position: 2029913
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2030392:1
position: 2030392
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2029913-2030392:1:exon

LOC119422931
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 451745
gene: LOC119422931
product: tRNA (adenine(37)-N6)-methyltransferase
inference: similar to RNA sequence (same species):INSD:GELZ01008865.1
exception: annotated by transcript or proteomic data
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: added 189 bases not found in genome assembly; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 99% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_037690343.1
SIO_010081: LOC119422931
subclass of: SO_0000673
so part of: LOC119422931
location: join(2029913..2030071,2030256..>2030392)
location: region:2029913-2030392:1
so has part: feature:2029913-2030071:1:exon
so has part: feature:2030256-2030392:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2029913-2030071:1:exon

position:2030071:1
position: 2030071
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2030256-2030392:1:exon

position:2030256:1
position: 2030256
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC119422931
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 451745
gene: LOC119422931
inference: similar to RNA sequence (same species):INSD:GELZ01008865.1
exception: annotated by transcript or proteomic data
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: added 179 bases not found in genome assembly; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tRNA (adenine(37)-N6)-methyltransferase
translation: MSPPCGCCRENMNKLNQQVSVMRKEIKNLRQVLDSSVRAHRKQLACVQAAVSKMTSCQDQDQDQTPTPPQSALEQGVIQTTPIGYITSCFSMKNGTPRQPTICSPSRAQLRIQQSVFNNAEHALLGLEPYSHVW
SIO_010081: LOC119422931
subclass of: SO_0000673
so part of: LOC119422931
location: join(2029983..2030071,2030256..>2030392)
location: region:2029983-2030392:1
so has part: feature:2029983-2030071:1:exon
so has part: feature:2030256-2030392:1:exon

XP_037546271.1
type: Protein
SIO_000068: ncbiprotein

position:2029983:1
position: 2029983
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2029983-2030071:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2030256-2030392:1:exon

hemgn
type: Gene
subclass of: SO_0000704
RO_0002162: 451745
gene: hemgn
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2031899..2033285)
location: region:2031899-2033285:-1
so has part: feature:2031899-2033285:-1:exon
subclass of: SO_0000010

119422658
type: Gene
SIO_000068: ncbigene

position:2031899:-1
position: 2031899
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2033285:-1
position: 2033285
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2031899-2033285:-1:exon

hemgn
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 451745
gene: hemgn
product: hemogen, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_037690044.1
SIO_010081: hemgn
subclass of: SO_0000673
so part of: hemgn
location: complement(join(2031899..2032078,2032150..2032607,2032894..2032972,2033160..2033285))
location: region:2031899-2033285:-1
so has part: feature:2033160-2033285:-1:exon
so has part: feature:2032894-2032972:-1:exon
so has part: feature:2032150-2032607:-1:exon
so has part: feature:2031899-2032078:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2033160-2033285:-1:exon

position:2033160:-1
position: 2033160
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2032894-2032972:-1:exon

position:2032894:-1
position: 2032894
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2032972:-1
position: 2032972
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2032150-2032607:-1:exon

position:2032150:-1
position: 2032150
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2032607:-1
position: 2032607
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2031899-2032078:-1:exon

position:2032078:-1
position: 2032078
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

hemgn
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 451745
gene: hemgn
product: hemogen, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_037690043.1
SIO_010081: hemgn
subclass of: SO_0000673
so part of: hemgn
location: complement(join(2031899..2032078,2032150..2032607,2032882..2032972,2033160..2033285))
location: region:2031899-2033285:-1
so has part: feature:2033160-2033285:-1:exon
so has part: feature:2032882-2032972:-1:exon
so has part: feature:2032150-2032607:-1:exon
so has part: feature:2031899-2032078:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2033160-2033285:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2032882-2032972:-1:exon

position:2032882:-1
position: 2032882
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2032150-2032607:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2031899-2032078:-1:exon

hemgn
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 451745
gene: hemgn
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein hemgn isoform X2
translation: MEDMQPDTKPKPEPGNQDEQEDGMRRRLRDRDLLRKRKAEAEEKETNQAESQRKRSRAETKSGPTRRGRPRKVELVPTVLDEAAGGIQETPAVVVAPEPAAAFISDQIYEALASIQAVEPQPAPPAPTLQTVVFQSAVGPSSDPASSQDPVPETGLAPPQLETLYMEPQDQEAPEQVLIEDLGPDEEEEEPLAEGRRNDEGLSGSLLIDVPEQIKMNSVPAACAPLLPQEYFAENSL
SIO_010081: hemgn
subclass of: SO_0000673
so part of: hemgn
location: complement(join(2031966..2032078,2032150..2032607,2032894..2032972,2033160..2033223))
location: region:2031966-2033223:-1
so has part: feature:2033160-2033223:-1:exon
so has part: feature:2032894-2032972:-1:exon
so has part: feature:2032150-2032607:-1:exon
so has part: feature:2031966-2032078:-1:exon

XP_037545972.1
type: Protein
SIO_000068: ncbiprotein

position:2031966:-1
position: 2031966
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2033223:-1
position: 2033223
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2033160-2033223:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2032894-2032972:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2032150-2032607:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2031966-2032078:-1:exon

hemgn
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 451745
gene: hemgn
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein hemgn isoform X1
translation: MEDMQPDTKPKPEPGNQDEQEDGMRRRLRDRDLLRKRKAEAEEKETNQWVLGAESQRKRSRAETKSGPTRRGRPRKVELVPTVLDEAAGGIQETPAVVVAPEPAAAFISDQIYEALASIQAVEPQPAPPAPTLQTVVFQSAVGPSSDPASSQDPVPETGLAPPQLETLYMEPQDQEAPEQVLIEDLGPDEEEEEPLAEGRRNDEGLSGSLLIDVPEQIKMNSVPAACAPLLPQEYFAENSL
SIO_010081: hemgn
subclass of: SO_0000673
so part of: hemgn
location: complement(join(2031966..2032078,2032150..2032607,2032882..2032972,2033160..2033223))
location: region:2031966-2033223:-1
so has part: feature:2033160-2033223:-1:exon
so has part: feature:2032882-2032972:-1:exon
so has part: feature:2032150-2032607:-1:exon
so has part: feature:2031966-2032078:-1:exon

XP_037545971.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2033160-2033223:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2032882-2032972:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2032150-2032607:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2031966-2032078:-1:exon

coro2aa
type: Gene
subclass of: SO_0000704
RO_0002162: 451745
gene: coro2aa
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2039009..2055132)
location: region:2039009-2055132:-1
so has part: feature:2039009-2055132:-1:exon
subclass of: SO_0000010

119423240
type: Gene
SIO_000068: ncbigene

position:2039009:-1
position: 2039009
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2055132:-1
position: 2055132
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2039009-2055132:-1:exon

coro2aa
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 451745
gene: coro2aa
product: coronin 2Aa
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 51 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_037690649.1
SIO_010081: coro2aa
subclass of: SO_0000673
so part of: coro2aa
location: complement(join(2039009..2039155,2041277..2041533,2041747..2041837,2041912..2042024,2042468..2042564,2042643..2042747,2043694..2043810,2044279..2044458,2046555..2046704,2046963..2047079,2050547..2050747,2055045..2055132))
location: region:2039009-2055132:-1
so has part: feature:2055045-2055132:-1:exon
so has part: feature:2050547-2050747:-1:exon
so has part: feature:2046963-2047079:-1:exon
so has part: feature:2046555-2046704:-1:exon
so has part: feature:2044279-2044458:-1:exon
so has part: feature:2043694-2043810:-1:exon
so has part: feature:2042643-2042747:-1:exon
so has part: feature:2042468-2042564:-1:exon
so has part: feature:2041912-2042024:-1:exon
so has part: feature:2041747-2041837:-1:exon
so has part: feature:2041277-2041533:-1:exon
so has part: feature:2039009-2039155:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2055045-2055132:-1:exon

position:2055045:-1
position: 2055045
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2050547-2050747:-1:exon

position:2050547:-1
position: 2050547
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2050747:-1
position: 2050747
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2046963-2047079:-1:exon

position:2046963:-1
position: 2046963
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2047079:-1
position: 2047079
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2046555-2046704:-1:exon

position:2046555:-1
position: 2046555
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2046704:-1
position: 2046704
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2044279-2044458:-1:exon

position:2044279:-1
position: 2044279
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2044458:-1
position: 2044458
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2043694-2043810:-1:exon

position:2043694:-1
position: 2043694
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2043810:-1
position: 2043810
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:2042643-2042747:-1:exon

position:2042643:-1
position: 2042643
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2042747:-1
position: 2042747
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:2042468-2042564:-1:exon

position:2042468:-1
position: 2042468
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2042564:-1
position: 2042564
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:2041912-2042024:-1:exon

position:2041912:-1
position: 2041912
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2042024:-1
position: 2042024
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:2041747-2041837:-1:exon

position:2041747:-1
position: 2041747
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2041837:-1
position: 2041837
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:2041277-2041533:-1:exon

position:2041277:-1
position: 2041277
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2041533:-1
position: 2041533
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:2039009-2039155:-1:exon

position:2039155:-1
position: 2039155
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

coro2aa
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 451745
gene: coro2aa
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: coronin-2A
translation: MTWRPQYRSSKFRHVFGKAAPKESCYDGVPITRSVQDNNFCAVNPRFLAIITECAGGGAFLVLSVNHTGKVDPHHPRVSGHRGHVLDVKWNPFNDYCIASCSEDATVKVWEIPPHGVLKNLTVPWKELQGHSRRVGLIEWHPTANNILFSTAYDYQVMIWNLDSPEPVIKNPVQTIKHHTDVVLSMSFNTYGSLLATTCRDKKVRLMEARSGNLLQEGNFKAHKASKVLILGNMKLLLTAGTSRYNDRQIALWDQDDLSEPLLQENLDGSSGVLFPFYDPDTHMLYLAGKGDGNIRYYEISSEKPFIHFLTEYRSHSPQKGMGVMPKRGLDVSSCEVFRFYKLVTTKSLIEPLSMIVPRRSESYQEDLYPMTASNRPALSAEEWLSGVSKGPLLMSLRPGSEATEPPADTKGRSNSLGTCRPQSRPDTLQPAYIQDQLEAKDSKGKDGRPEDDTRWTAVSNGEDVALCSIPRTENELRLKFLKQQEEIRRLRELLNQRDVRVKQLELEIKNIKNSQSQNSL
SIO_010081: coro2aa
subclass of: SO_0000673
so part of: coro2aa
location: complement(join(2039018..2039155,2041277..2041533,2041747..2041837,2041912..2042024,2042468..2042564,2042643..2042747,2043694..2043810,2044279..2044458,2046555..2046704,2046963..2047079,2050547..2050747))
location: region:2039018-2050747:-1
so has part: feature:2050547-2050747:-1:exon
so has part: feature:2046963-2047079:-1:exon
so has part: feature:2046555-2046704:-1:exon
so has part: feature:2044279-2044458:-1:exon
so has part: feature:2043694-2043810:-1:exon
so has part: feature:2042643-2042747:-1:exon
so has part: feature:2042468-2042564:-1:exon
so has part: feature:2041912-2042024:-1:exon
so has part: feature:2041747-2041837:-1:exon
so has part: feature:2041277-2041533:-1:exon
so has part: feature:2039018-2039155:-1:exon

XP_037546577.1
type: Protein
SIO_000068: ncbiprotein

position:2039018:-1
position: 2039018
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2050547-2050747:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2046963-2047079:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2046555-2046704:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2044279-2044458:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2043694-2043810:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2042643-2042747:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2042468-2042564:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2041912-2042024:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2041747-2041837:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2041277-2041533:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2039018-2039155:-1:exon

pkd2
type: Gene
subclass of: SO_0000704
RO_0002162: 451745
gene: pkd2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2052104..2073937
location: region:2052104-2073937:1
so has part: feature:2052104-2073937:1:exon
subclass of: SO_0000010

119423012
type: Gene
SIO_000068: ncbigene

position:2052104:1
position: 2052104
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2073937:1
position: 2073937
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2052104-2073937:1:exon

pkd2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 451745
gene: pkd2
product: polycystic kidney disease 2
inference: similar to RNA sequence (same species):INSD:GELZ01019652.1
exception: annotated by transcript or proteomic data
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: added 117 bases not found in genome assembly; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 18 Proteins, and 89% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_037690423.1
SIO_010081: pkd2
subclass of: SO_0000673
so part of: pkd2
location: join(2052104..2052178,2052940..2053049,2055644..2056023,2058634..2058747,2060746..2060879,2065564..2065814,2067303..2067527,2067645..2067873,2067958..2068128,2068206..2068387,2068486..2068606,2068684..2068782,2070164..2070285,2070405..2070522,2070621..2070784,2073130..>2073277,<2073833..2073937)
location: region:2052104-2073937:1
so has part: feature:2052104-2052178:1:exon
so has part: feature:2052940-2053049:1:exon
so has part: feature:2055644-2056023:1:exon
so has part: feature:2058634-2058747:1:exon
so has part: feature:2060746-2060879:1:exon
so has part: feature:2065564-2065814:1:exon
so has part: feature:2067303-2067527:1:exon
so has part: feature:2067645-2067873:1:exon
so has part: feature:2067958-2068128:1:exon
so has part: feature:2068206-2068387:1:exon
so has part: feature:2068486-2068606:1:exon
so has part: feature:2068684-2068782:1:exon
so has part: feature:2070164-2070285:1:exon
so has part: feature:2070405-2070522:1:exon
so has part: feature:2070621-2070784:1:exon
so has part: feature:2073130-2073277:1:exon
so has part: feature:2073833-2073937:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2052104-2052178:1:exon

position:2052178:1
position: 2052178
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2052940-2053049:1:exon

position:2052940:1
position: 2052940
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2053049:1
position: 2053049
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2055644-2056023:1:exon

position:2055644:1
position: 2055644
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2056023:1
position: 2056023
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2058634-2058747:1:exon

position:2058634:1
position: 2058634
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2058747:1
position: 2058747
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2060746-2060879:1:exon

position:2060746:1
position: 2060746
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2060879:1
position: 2060879
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2065564-2065814:1:exon

position:2065564:1
position: 2065564
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2065814:1
position: 2065814
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:2067303-2067527:1:exon

position:2067303:1
position: 2067303
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2067527:1
position: 2067527
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:2067645-2067873:1:exon

position:2067645:1
position: 2067645
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2067873:1
position: 2067873
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:2067958-2068128:1:exon

position:2067958:1
position: 2067958
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2068128:1
position: 2068128
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:2068206-2068387:1:exon

position:2068206:1
position: 2068206
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2068387:1
position: 2068387
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:2068486-2068606:1:exon

position:2068486:1
position: 2068486
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2068606:1
position: 2068606
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:2068684-2068782:1:exon

position:2068684:1
position: 2068684
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2068782:1
position: 2068782
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:2070164-2070285:1:exon

position:2070164:1
position: 2070164
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2070285:1
position: 2070285
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:2070405-2070522:1:exon

position:2070405:1
position: 2070405
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2070522:1
position: 2070522
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:2070621-2070784:1:exon

position:2070621:1
position: 2070621
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2070784:1
position: 2070784
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:2073130-2073277:1:exon

position:2073130:1
position: 2073130
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2073277:1
position: 2073277
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 17
SIO_000628: feature:2073833-2073937:1:exon

position:2073833:1
position: 2073833
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

pkd2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 451745
gene: pkd2
inference: similar to RNA sequence (same species):INSD:GELZ01019652.1
exception: annotated by transcript or proteomic data
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: added 117 bases not found in genome assembly; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: polycystin-2
translation: MVDCTVGCTVGCTVDCTVDCTVDCTFWTNPKTTRPSLEAVSSSRPDVLHTLRAKPKLRNVQVIQHPDLERIQHPDLERIQHPDLERIQHPDLGLGVLGTSSPPSRQAWSRDNPGFELEEEIMEADWPSASPVRRSVSAASSCSSGRESRSNRGQVLRGGPLPTRSLNASQQNGHERLSCMKQILQKIRILWGTDLMEDSDNSREQYLWNVLREMLTYIAFLVTICVLTYGMVNSNMYYYTKVMSKLFLDTPLFPGDPATFRSLSTMEDFWKFTQGPFLSGVYWEVWYNNKSLPENQTLIYYENLLLGVPRLRQVRVHNESCSIYKDLQDEVQDCYNIYTPSNEDTASFGPKNGTAWVYTRESEMNGSSFWGQVSRYGGGGYYQDLSRTREESAAQLQFLKDHLWLDRGTRAVFLDFSVYNRNINLFCVARLLVEFPATGGMETSWQFQTVRLIRYLSSWDYFVGMCEVAFCLFILYYVVEEVLEIHLHRLHYFRSVWNCLDVLIVVLSVVAIIMNITRTAMARNLLNDLLENYSAHASFERLADLQVHFNNMAAVIVFFSWVKLFKFINVNQTMSQLTSTMSRCAKDLCGFAIMFFIIFLAYAQLAYLVFGTQVNDFSTFQASIFTQFRIVLGDFNFSEMEEAHPVLGPVYFTTFVFFIFFILMNMFLAIINDTYSEVKADMSQQRSEMEMTDLLKKCCNKALMKLRLKKTAVDDLSDTEQQAGGKLNSDELHHNLKGKGPTEAAIQAIFAKYNQDGDPELTEQEHQQMKDDLEKDREDLELERNSLTRPSSGRSFPRTQDDSEEDDDEDSGHSSRRRGSSSGGVSYEEFQVLVRRVDRMEHSIGSIVSKIDAVIVKLEGMERSKLKRRDVLSRLLDGFVEDERLGRHTDAHREQMERLVREELERWDLDDTVSQASHPQQATPGGPLPRPPSSLSINSLDTSADGGVHV
SIO_010081: pkd2
subclass of: SO_0000673
so part of: pkd2
location: join(2052104..2052178,2052940..2053049,2055644..2056023,2058634..2058747,2060746..2060879,2065564..2065814,2067303..2067527,2067645..2067873,2067958..2068128,2068206..2068387,2068486..2068606,2068684..2068782,2070164..2070285,2070405..2070522,2070621..2070784,2073130..>2073277,<2073833..2073925)
location: region:2052104-2073925:1
so has part: feature:2052104-2052178:1:exon
so has part: feature:2052940-2053049:1:exon
so has part: feature:2055644-2056023:1:exon
so has part: feature:2058634-2058747:1:exon
so has part: feature:2060746-2060879:1:exon
so has part: feature:2065564-2065814:1:exon
so has part: feature:2067303-2067527:1:exon
so has part: feature:2067645-2067873:1:exon
so has part: feature:2067958-2068128:1:exon
so has part: feature:2068206-2068387:1:exon
so has part: feature:2068486-2068606:1:exon
so has part: feature:2068684-2068782:1:exon
so has part: feature:2070164-2070285:1:exon
so has part: feature:2070405-2070522:1:exon
so has part: feature:2070621-2070784:1:exon
so has part: feature:2073130-2073277:1:exon
so has part: feature:2073833-2073925:1:exon

XP_037546351.1
type: Protein
SIO_000068: ncbiprotein

position:2073925:1
position: 2073925
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2052104-2052178:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2052940-2053049:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2055644-2056023:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2058634-2058747:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2060746-2060879:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2065564-2065814:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2067303-2067527:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2067645-2067873:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2067958-2068128:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2068206-2068387:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2068486-2068606:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2068684-2068782:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2070164-2070285:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2070405-2070522:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2070621-2070784:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2073130-2073277:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:2073833-2073925:1:exon

uso1
type: Gene
subclass of: SO_0000704
RO_0002162: 451745
gene: uso1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2109530..2133780)
location: region:2109530-2133780:-1
so has part: feature:2109530-2133780:-1:exon
subclass of: SO_0000010

119422659
type: Gene
SIO_000068: ncbigene

position:2109530:-1
position: 2109530
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2133780:-1
position: 2133780
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2109530-2133780:-1:exon

uso1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 451745
gene: uso1
product: USO1 vesicle transport factor
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_037690045.1
SIO_010081: uso1
subclass of: SO_0000673
so part of: uso1
location: complement(join(2109530..2110429,2111554..2111748,2111841..2111930,2112023..2112121,2114066..2114125,2114561..2114727,2115306..2115444,2115549..2115670,2115760..2115941,2116042..2116160,2116362..2116472,2126161..2126366,2126443..2126597,2126673..2126761,2126839..2126979,2127055..2127233,2127337..2127457,2127559..2127614,2127774..2127876,2127968..2128068,2129960..2129971,2130187..2130263,2130812..2130876,2131859..2131945,2133555..2133780))
location: region:2109530-2133780:-1
so has part: feature:2133555-2133780:-1:exon
so has part: feature:2131859-2131945:-1:exon
so has part: feature:2130812-2130876:-1:exon
so has part: feature:2130187-2130263:-1:exon
so has part: feature:2129960-2129971:-1:exon
so has part: feature:2127968-2128068:-1:exon
so has part: feature:2127774-2127876:-1:exon
so has part: feature:2127559-2127614:-1:exon
so has part: feature:2127337-2127457:-1:exon
so has part: feature:2127055-2127233:-1:exon
so has part: feature:2126839-2126979:-1:exon
so has part: feature:2126673-2126761:-1:exon
so has part: feature:2126443-2126597:-1:exon
so has part: feature:2126161-2126366:-1:exon
so has part: feature:2116362-2116472:-1:exon
so has part: feature:2116042-2116160:-1:exon
so has part: feature:2115760-2115941:-1:exon
so has part: feature:2115549-2115670:-1:exon
so has part: feature:2115306-2115444:-1:exon
so has part: feature:2114561-2114727:-1:exon
so has part: feature:2114066-2114125:-1:exon
so has part: feature:2112023-2112121:-1:exon
so has part: feature:2111841-2111930:-1:exon
so has part: feature:2111554-2111748:-1:exon
so has part: feature:2109530-2110429:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2133555-2133780:-1:exon

position:2133555:-1
position: 2133555
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2131859-2131945:-1:exon

position:2131859:-1
position: 2131859
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2131945:-1
position: 2131945
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2130812-2130876:-1:exon

position:2130812:-1
position: 2130812
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2130876:-1
position: 2130876
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2130187-2130263:-1:exon

position:2130187:-1
position: 2130187
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2130263:-1
position: 2130263
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2129960-2129971:-1:exon

position:2129960:-1
position: 2129960
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2129971:-1
position: 2129971
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2127968-2128068:-1:exon

position:2127968:-1
position: 2127968
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2128068:-1
position: 2128068
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:2127774-2127876:-1:exon

position:2127774:-1
position: 2127774
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2127876:-1
position: 2127876
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:2127559-2127614:-1:exon

position:2127559:-1
position: 2127559
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2127614:-1
position: 2127614
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:2127337-2127457:-1:exon

position:2127337:-1
position: 2127337
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2127457:-1
position: 2127457
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:2127055-2127233:-1:exon

position:2127055:-1
position: 2127055
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2127233:-1
position: 2127233
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:2126839-2126979:-1:exon

position:2126839:-1
position: 2126839
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2126979:-1
position: 2126979
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:2126673-2126761:-1:exon

position:2126673:-1
position: 2126673
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2126761:-1
position: 2126761
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:2126443-2126597:-1:exon

position:2126443:-1
position: 2126443
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2126597:-1
position: 2126597
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:2126161-2126366:-1:exon

position:2126161:-1
position: 2126161
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2126366:-1
position: 2126366
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:2116362-2116472:-1:exon

position:2116362:-1
position: 2116362
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2116472:-1
position: 2116472
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:2116042-2116160:-1:exon

position:2116042:-1
position: 2116042
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2116160:-1
position: 2116160
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:2115760-2115941:-1:exon

position:2115760:-1
position: 2115760
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2115941:-1
position: 2115941
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:2115549-2115670:-1:exon

position:2115549:-1
position: 2115549
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2115670:-1
position: 2115670
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:2115306-2115444:-1:exon

position:2115306:-1
position: 2115306
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2115444:-1
position: 2115444
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:2114561-2114727:-1:exon

position:2114561:-1
position: 2114561
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2114727:-1
position: 2114727
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:2114066-2114125:-1:exon

position:2114066:-1
position: 2114066
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2114125:-1
position: 2114125
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:2112023-2112121:-1:exon

position:2112023:-1
position: 2112023
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2112121:-1
position: 2112121
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:2111841-2111930:-1:exon

position:2111841:-1
position: 2111841
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2111930:-1
position: 2111930
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:2111554-2111748:-1:exon

position:2111554:-1
position: 2111554
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2111748:-1
position: 2111748
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:2109530-2110429:-1:exon

position:2110429:-1
position: 2110429
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

uso1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 451745
gene: uso1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: general vesicular transport factor p115
translation: MNFFRGVIAGQSAGPQPTGAETIQKLCDRVASSTLLEDRRDAVRALKSLSKKYRLEVGTQAMDYLINILQTDRSDSEILGYALDTLYNIICNDEEEEQDESEDENAQKQADDLGAQFTEKLIQDPEHVTLLLTLLEEFDFHVRWPGVKLLTALLKNQGVQVQGVILVSPMGVSRLMDLLADSREVIRNDGLLLLQQLTKGNAAIQKIVAFENAFERLLDIITEEGSSDGGIVVEDCLLLLLNLLKNNSSNQNFFKEGSYIQRMKPWFEVGDDNSGWSAQKVTNLHLMLQLVRVMVSPVNSPGATASCQKCMFQCGLLQQLCTILMATGVPADILTETINTVSEVIRGSQVNQDYFASVNAPSSPPRPAIVVLLMSMVNERQPFVLRCAVLYCFQCFLYKNQKGQGEIVATLLPSTIDANSISAGQLLCGGLFSADSLSNWCAAVALAHALQDNLTQKEQLLRVQLATSLGKPPVSLLQQCTNILSQGSKVQTRVGLLMLLCTWSSSCPIAVTHFLHNQDNVPFLTAQISENLGEDERLVQGLCALLLGICIYYNDNSLENYTKEKLKQLIEKRIGKENFVEKLGFITKHELYSRAALKPQPVFPSPEQMLFDHEFTKLVKELEGMITKAVHKSSEEEKKEEEVKKTLEQHDNIVTRYKELIREQDAQIQELKEQMLSLSTQNEQMQSTMSQQLSQIQQHKDQYSILKLKLGKENQSPPTNHGDVSQVNGLQTEELLQLREELEELRRQHALLQTQLHDKDALVDSLKVSQQTESPAAGPENTELLQDLESLKDQIQAQSAEIHQLKTERQDLLRQAEAVASDGDGTSHATRTDLESRLRAQQSETEKLKDSRAQLEQQLAAATSTVAIVQTEKTKLLSELQESKKEQDDLLMLLADQDQKIHNLKQKLKDLGETVDDEDDIDARDQTSEEDDEDED
SIO_010081: uso1
subclass of: SO_0000673
so part of: uso1
location: complement(join(2110361..2110429,2111554..2111748,2111841..2111930,2112023..2112121,2114066..2114125,2114561..2114727,2115306..2115444,2115549..2115670,2115760..2115941,2116042..2116160,2116362..2116472,2126161..2126366,2126443..2126597,2126673..2126761,2126839..2126979,2127055..2127233,2127337..2127457,2127559..2127614,2127774..2127876,2127968..2128068,2129960..2129971,2130187..2130263,2130812..2130876,2131859..2131945,2133555..2133620))
location: region:2110361-2133620:-1
so has part: feature:2133555-2133620:-1:exon
so has part: feature:2131859-2131945:-1:exon
so has part: feature:2130812-2130876:-1:exon
so has part: feature:2130187-2130263:-1:exon
so has part: feature:2129960-2129971:-1:exon
so has part: feature:2127968-2128068:-1:exon
so has part: feature:2127774-2127876:-1:exon
so has part: feature:2127559-2127614:-1:exon
so has part: feature:2127337-2127457:-1:exon
so has part: feature:2127055-2127233:-1:exon
so has part: feature:2126839-2126979:-1:exon
so has part: feature:2126673-2126761:-1:exon
so has part: feature:2126443-2126597:-1:exon
so has part: feature:2126161-2126366:-1:exon
so has part: feature:2116362-2116472:-1:exon
so has part: feature:2116042-2116160:-1:exon
so has part: feature:2115760-2115941:-1:exon
so has part: feature:2115549-2115670:-1:exon
so has part: feature:2115306-2115444:-1:exon
so has part: feature:2114561-2114727:-1:exon
so has part: feature:2114066-2114125:-1:exon
so has part: feature:2112023-2112121:-1:exon
so has part: feature:2111841-2111930:-1:exon
so has part: feature:2111554-2111748:-1:exon
so has part: feature:2110361-2110429:-1:exon

XP_037545973.1
type: Protein
SIO_000068: ncbiprotein

position:2110361:-1
position: 2110361
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2133620:-1
position: 2133620
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2133555-2133620:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2131859-2131945:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2130812-2130876:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2130187-2130263:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2129960-2129971:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2127968-2128068:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2127774-2127876:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2127559-2127614:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2127337-2127457:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2127055-2127233:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2126839-2126979:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2126673-2126761:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2126443-2126597:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2126161-2126366:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2116362-2116472:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2116042-2116160:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:2115760-2115941:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:2115549-2115670:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:2115306-2115444:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:2114561-2114727:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:2114066-2114125:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:2112023-2112121:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:2111841-2111930:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:2111554-2111748:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:2110361-2110429:-1:exon

g3bp2a
type: Gene
subclass of: SO_0000704
RO_0002162: 451745
gene: g3bp2a
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2137732..>2145205)
location: region:2137732-2145205:-1
so has part: feature:2137732-2145205:-1:exon
subclass of: SO_0000010

119423241
type: Gene
SIO_000068: ncbigene

position:2137732:-1
position: 2137732
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2145205:-1
position: 2145205
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2137732-2145205:-1:exon

g3bp2a
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 451745
gene: g3bp2a
product: G3BP stress granule assembly factor 2a, transcript variant X1
inference: similar to RNA sequence (same species):INSD:GELZ01035770.1
exception: annotated by transcript or proteomic data
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: added 331 bases not found in genome assembly; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_037690650.1
SIO_010081: g3bp2a
subclass of: SO_0000673
so part of: g3bp2a
location: complement(join(2137732..2138947,2139155..2139282,2139370..2139522,2139580..2139639,2139722..2139824,2141161..2141262,2141585..2141771,2144441..2144546,2144645..2144735,2145032..>2145205))
location: region:2137732-2145205:-1
so has part: feature:2145032-2145205:-1:exon
so has part: feature:2144645-2144735:-1:exon
so has part: feature:2144441-2144546:-1:exon
so has part: feature:2141585-2141771:-1:exon
so has part: feature:2141161-2141262:-1:exon
so has part: feature:2139722-2139824:-1:exon
so has part: feature:2139580-2139639:-1:exon
so has part: feature:2139370-2139522:-1:exon
so has part: feature:2139155-2139282:-1:exon
so has part: feature:2137732-2138947:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2145032-2145205:-1:exon

position:2145032:-1
position: 2145032
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2144645-2144735:-1:exon

position:2144645:-1
position: 2144645
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2144735:-1
position: 2144735
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2144441-2144546:-1:exon

position:2144441:-1
position: 2144441
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2144546:-1
position: 2144546
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2141585-2141771:-1:exon

position:2141585:-1
position: 2141585
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2141771:-1
position: 2141771
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2141161-2141262:-1:exon

position:2141161:-1
position: 2141161
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2141262:-1
position: 2141262
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2139722-2139824:-1:exon

position:2139722:-1
position: 2139722
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2139824:-1
position: 2139824
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:2139580-2139639:-1:exon

position:2139580:-1
position: 2139580
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2139639:-1
position: 2139639
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:2139370-2139522:-1:exon

position:2139370:-1
position: 2139370
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2139522:-1
position: 2139522
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:2139155-2139282:-1:exon

position:2139155:-1
position: 2139155
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2139282:-1
position: 2139282
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:2137732-2138947:-1:exon

position:2138947:-1
position: 2138947
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

g3bp2a
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 451745
gene: g3bp2a
product: G3BP stress granule assembly factor 2a, transcript variant X3
inference: similar to RNA sequence (same species):INSD:GELZ01035770.1
exception: annotated by transcript or proteomic data
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: added 331 bases not found in genome assembly; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_037690652.1
SIO_010081: g3bp2a
subclass of: SO_0000673
so part of: g3bp2a
location: complement(join(2137734..2138947,2139155..2139282,2139370..2139498,2139580..2139639,2139722..2139824,2141161..2141262,2141585..2141771,2144441..2144546,2144645..2144735,2145032..>2145205))
location: region:2137734-2145205:-1
so has part: feature:2145032-2145205:-1:exon
so has part: feature:2144645-2144735:-1:exon
so has part: feature:2144441-2144546:-1:exon
so has part: feature:2141585-2141771:-1:exon
so has part: feature:2141161-2141262:-1:exon
so has part: feature:2139722-2139824:-1:exon
so has part: feature:2139580-2139639:-1:exon
so has part: feature:2139370-2139498:-1:exon
so has part: feature:2139155-2139282:-1:exon
so has part: feature:2137734-2138947:-1:exon

position:2137734:-1
position: 2137734
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2145032-2145205:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2144645-2144735:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2144441-2144546:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2141585-2141771:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2141161-2141262:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2139722-2139824:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2139580-2139639:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2139370-2139498:-1:exon

position:2139498:-1
position: 2139498
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:2139155-2139282:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2137734-2138947:-1:exon

g3bp2a
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 451745
gene: g3bp2a
product: G3BP stress granule assembly factor 2a, transcript variant X2
inference: similar to RNA sequence (same species):INSD:GELZ01035770.1
exception: annotated by transcript or proteomic data
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: added 331 bases not found in genome assembly; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_037690651.1
SIO_010081: g3bp2a
subclass of: SO_0000673
so part of: g3bp2a
location: complement(join(2137734..2138947,2139164..2139282,2139370..2139522,2139580..2139639,2139722..2139824,2141161..2141262,2141585..2141771,2144441..2144546,2144645..2144735,2145032..>2145205))
location: region:2137734-2145205:-1
so has part: feature:2145032-2145205:-1:exon
so has part: feature:2144645-2144735:-1:exon
so has part: feature:2144441-2144546:-1:exon
so has part: feature:2141585-2141771:-1:exon
so has part: feature:2141161-2141262:-1:exon
so has part: feature:2139722-2139824:-1:exon
so has part: feature:2139580-2139639:-1:exon
so has part: feature:2139370-2139522:-1:exon
so has part: feature:2139164-2139282:-1:exon
so has part: feature:2137734-2138947:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2145032-2145205:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2144645-2144735:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2144441-2144546:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2141585-2141771:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2141161-2141262:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2139722-2139824:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2139580-2139639:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2139370-2139522:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2139164-2139282:-1:exon

position:2139164:-1
position: 2139164
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:2137734-2138947:-1:exon

g3bp2a
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 451745
gene: g3bp2a
product: G3BP stress granule assembly factor 2a, transcript variant X4
inference: similar to RNA sequence (same species):INSD:GELZ01035770.1
exception: annotated by transcript or proteomic data
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: added 331 bases not found in genome assembly; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 12 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_037690653.1
SIO_010081: g3bp2a
subclass of: SO_0000673
so part of: g3bp2a
location: complement(join(2137735..2138947,2139164..2139282,2139370..2139498,2139580..2139639,2139722..2139824,2141161..2141262,2141585..2141771,2144441..2144546,2144645..2144735,2145032..>2145205))
location: region:2137735-2145205:-1
so has part: feature:2145032-2145205:-1:exon
so has part: feature:2144645-2144735:-1:exon
so has part: feature:2144441-2144546:-1:exon
so has part: feature:2141585-2141771:-1:exon
so has part: feature:2141161-2141262:-1:exon
so has part: feature:2139722-2139824:-1:exon
so has part: feature:2139580-2139639:-1:exon
so has part: feature:2139370-2139498:-1:exon
so has part: feature:2139164-2139282:-1:exon
so has part: feature:2137735-2138947:-1:exon

position:2137735:-1
position: 2137735
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2145032-2145205:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2144645-2144735:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2144441-2144546:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2141585-2141771:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2141161-2141262:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2139722-2139824:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2139580-2139639:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2139370-2139498:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2139164-2139282:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2137735-2138947:-1:exon

g3bp2a
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 451745
gene: g3bp2a
inference: similar to RNA sequence (same species):INSD:GELZ01035770.1
exception: annotated by transcript or proteomic data
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: added 177 bases not found in genome assembly; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ras GTPase-activating protein-binding protein 2 isoform X4
translation: MVMEKPSPLLVGREFVRQYYTLLNKAPDFLHRFYGRNSSYVHGGLDPSGKLAEAVYGQAEIHKKVMSLQFSECHTKIRHVDAHATLSDGVVVQVLGELSNNGQPMRKFMQTFVLAPEGSVANKFYVHNDIFCYEDEVFGDSEAELDEESEEEVEEESEERRTSPEPLQESPNSTTYYEPHLVPNGIEEPMEEPAAAPEPEPEPEQEPTVEEVKLEGDEKVVEEIEEKAPSPTPVESPPNPQEPPKPFSWALVTSKNLPPSGSVTSSGISPHVVKGTSSQLRVESKPETQTTPLRPRDQRARDRPTFTQRVPRPDGVGNSESQTGKPHTSFVNKGGRDPESSDVDTRRIVRYPDSHQLFVGNLPHDIDENELKEFFMTYGNVVELRINTKGVGGKLPNFGFVVFDDPDPVQRILGAKPIMFRGEVRLNVEEKKTRAVRERETRGVDERRDMRRSDRGPGGSRSIAGSGMMRERDGRGPPPRGGMAPKPGMGSGRGSGGAVEGRFTPQRR
SIO_010081: g3bp2a
subclass of: SO_0000673
so part of: g3bp2a
location: complement(join(2138669..2138947,2139164..2139282,2139370..2139498,2139580..2139639,2139722..2139824,2141161..2141262,2141585..2141771,2144441..2144546,2144645..2144735,2145032..>2145205))
location: region:2138669-2145205:-1
so has part: feature:2145032-2145205:-1:exon
so has part: feature:2144645-2144735:-1:exon
so has part: feature:2144441-2144546:-1:exon
so has part: feature:2141585-2141771:-1:exon
so has part: feature:2141161-2141262:-1:exon
so has part: feature:2139722-2139824:-1:exon
so has part: feature:2139580-2139639:-1:exon
so has part: feature:2139370-2139498:-1:exon
so has part: feature:2139164-2139282:-1:exon
so has part: feature:2138669-2138947:-1:exon

XP_037546581.1
type: Protein
SIO_000068: ncbiprotein

position:2138669:-1
position: 2138669
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2145032-2145205:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2144645-2144735:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2144441-2144546:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2141585-2141771:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2141161-2141262:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2139722-2139824:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2139580-2139639:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2139370-2139498:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2139164-2139282:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2138669-2138947:-1:exon

g3bp2a
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 451745
gene: g3bp2a
inference: similar to RNA sequence (same species):INSD:GELZ01035770.1
exception: annotated by transcript or proteomic data
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: added 177 bases not found in genome assembly; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ras GTPase-activating protein-binding protein 2 isoform X3
translation: MVMEKPSPLLVGREFVRQYYTLLNKAPDFLHRFYGRNSSYVHGGLDPSGKLAEAVYGQAEIHKKVMSLQFSECHTKIRHVDAHATLSDGVVVQVLGELSNNGQPMRKFMQTFVLAPEGSVANKFYVHNDIFCYEDEVFGDSEAELDEESEEEVEEESEERRTSPEPLQESPNSTTYYEPHLVPNGIEEPMEEPAAAPEPEPEPEQEPTVEEVKLEGDEKVVEEIEEKAPSPTPVESPPNPQEPPKPFSWALVTSKNLPPSGSVTSSGISPHVVKGTSSQLRVESKPETQTTPLRPRDQRARDRPTFTQRVPRPDGVGNSESQTGKPHTSFVNKGGRDPESSDVDTRRIVRYPDSHQLFVGNLPHDIDENELKEFFMTYGNVVELRINTKGVGGKLPNFGFVVFDDPDPVQRILGAKVEGPIMFRGEVRLNVEEKKTRAVRERETRGVDERRDMRRSDRGPGGSRSIAGSGMMRERDGRGPPPRGGMAPKPGMGSGRGSGGAVEGRFTPQRR
SIO_010081: g3bp2a
subclass of: SO_0000673
so part of: g3bp2a
location: complement(join(2138669..2138947,2139155..2139282,2139370..2139498,2139580..2139639,2139722..2139824,2141161..2141262,2141585..2141771,2144441..2144546,2144645..2144735,2145032..>2145205))
location: region:2138669-2145205:-1
so has part: feature:2145032-2145205:-1:exon
so has part: feature:2144645-2144735:-1:exon
so has part: feature:2144441-2144546:-1:exon
so has part: feature:2141585-2141771:-1:exon
so has part: feature:2141161-2141262:-1:exon
so has part: feature:2139722-2139824:-1:exon
so has part: feature:2139580-2139639:-1:exon
so has part: feature:2139370-2139498:-1:exon
so has part: feature:2139155-2139282:-1:exon
so has part: feature:2138669-2138947:-1:exon

XP_037546580.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2145032-2145205:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2144645-2144735:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2144441-2144546:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2141585-2141771:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2141161-2141262:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2139722-2139824:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2139580-2139639:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2139370-2139498:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2139155-2139282:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2138669-2138947:-1:exon

g3bp2a
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 451745
gene: g3bp2a
inference: similar to RNA sequence (same species):INSD:GELZ01035770.1
exception: annotated by transcript or proteomic data
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: added 177 bases not found in genome assembly; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ras GTPase-activating protein-binding protein 2 isoform X2
translation: MVMEKPSPLLVGREFVRQYYTLLNKAPDFLHRFYGRNSSYVHGGLDPSGKLAEAVYGQAEIHKKVMSLQFSECHTKIRHVDAHATLSDGVVVQVLGELSNNGQPMRKFMQTFVLAPEGSVANKFYVHNDIFCYEDEVFGDSEAELDEESEEEVEEESEERRTSPEPLQESPNSTTYYEPHLVPNGIEEPMEEPAAAPEPEPEPEQEPTVEEVKLEGDEKVVEEIEEKAPSPTPVESPPNPQEPPKPFSWALVTSKNLPPSGSVTSSGISPHVVKGTSSQLRVESKPETQTTPLRPRDQRARDRPTFTQRVPRPDGVGNSESQTGKPHTSFVNKVVERLAPAGGRDPESSDVDTRRIVRYPDSHQLFVGNLPHDIDENELKEFFMTYGNVVELRINTKGVGGKLPNFGFVVFDDPDPVQRILGAKPIMFRGEVRLNVEEKKTRAVRERETRGVDERRDMRRSDRGPGGSRSIAGSGMMRERDGRGPPPRGGMAPKPGMGSGRGSGGAVEGRFTPQRR
SIO_010081: g3bp2a
subclass of: SO_0000673
so part of: g3bp2a
location: complement(join(2138669..2138947,2139164..2139282,2139370..2139522,2139580..2139639,2139722..2139824,2141161..2141262,2141585..2141771,2144441..2144546,2144645..2144735,2145032..>2145205))
location: region:2138669-2145205:-1
so has part: feature:2145032-2145205:-1:exon
so has part: feature:2144645-2144735:-1:exon
so has part: feature:2144441-2144546:-1:exon
so has part: feature:2141585-2141771:-1:exon
so has part: feature:2141161-2141262:-1:exon
so has part: feature:2139722-2139824:-1:exon
so has part: feature:2139580-2139639:-1:exon
so has part: feature:2139370-2139522:-1:exon
so has part: feature:2139164-2139282:-1:exon
so has part: feature:2138669-2138947:-1:exon

XP_037546579.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2145032-2145205:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2144645-2144735:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2144441-2144546:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2141585-2141771:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2141161-2141262:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2139722-2139824:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2139580-2139639:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2139370-2139522:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2139164-2139282:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2138669-2138947:-1:exon

g3bp2a
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 451745
gene: g3bp2a
inference: similar to RNA sequence (same species):INSD:GELZ01035770.1
exception: annotated by transcript or proteomic data
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: added 177 bases not found in genome assembly; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ras GTPase-activating protein-binding protein 2 isoform X1
translation: MVMEKPSPLLVGREFVRQYYTLLNKAPDFLHRFYGRNSSYVHGGLDPSGKLAEAVYGQAEIHKKVMSLQFSECHTKIRHVDAHATLSDGVVVQVLGELSNNGQPMRKFMQTFVLAPEGSVANKFYVHNDIFCYEDEVFGDSEAELDEESEEEVEEESEERRTSPEPLQESPNSTTYYEPHLVPNGIEEPMEEPAAAPEPEPEPEQEPTVEEVKLEGDEKVVEEIEEKAPSPTPVESPPNPQEPPKPFSWALVTSKNLPPSGSVTSSGISPHVVKGTSSQLRVESKPETQTTPLRPRDQRARDRPTFTQRVPRPDGVGNSESQTGKPHTSFVNKVVERLAPAGGRDPESSDVDTRRIVRYPDSHQLFVGNLPHDIDENELKEFFMTYGNVVELRINTKGVGGKLPNFGFVVFDDPDPVQRILGAKVEGPIMFRGEVRLNVEEKKTRAVRERETRGVDERRDMRRSDRGPGGSRSIAGSGMMRERDGRGPPPRGGMAPKPGMGSGRGSGGAVEGRFTPQRR
SIO_010081: g3bp2a
subclass of: SO_0000673
so part of: g3bp2a
location: complement(join(2138669..2138947,2139155..2139282,2139370..2139522,2139580..2139639,2139722..2139824,2141161..2141262,2141585..2141771,2144441..2144546,2144645..2144735,2145032..>2145205))
location: region:2138669-2145205:-1
so has part: feature:2145032-2145205:-1:exon
so has part: feature:2144645-2144735:-1:exon
so has part: feature:2144441-2144546:-1:exon
so has part: feature:2141585-2141771:-1:exon
so has part: feature:2141161-2141262:-1:exon
so has part: feature:2139722-2139824:-1:exon
so has part: feature:2139580-2139639:-1:exon
so has part: feature:2139370-2139522:-1:exon
so has part: feature:2139155-2139282:-1:exon
so has part: feature:2138669-2138947:-1:exon

XP_037546578.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2145032-2145205:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2144645-2144735:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2144441-2144546:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2141585-2141771:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2141161-2141262:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2139722-2139824:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2139580-2139639:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2139370-2139522:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2139155-2139282:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2138669-2138947:-1:exon

ppm1kb
type: Gene
subclass of: SO_0000704
RO_0002162: 451745
gene: ppm1kb
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2181958..2192275)
location: region:2181958-2192275:-1
so has part: feature:2181958-2192275:-1:exon
subclass of: SO_0000010

119423242
type: Gene
SIO_000068: ncbigene

position:2181958:-1
position: 2181958
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2192275:-1
position: 2192275
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2181958-2192275:-1:exon

ppm1kb
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 451745
gene: ppm1kb
product: protein phosphatase, Mg2+/Mn2+ dependent 1Kb
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 19 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_037690654.1
SIO_010081: ppm1kb
subclass of: SO_0000673
so part of: ppm1kb
location: complement(join(2181958..2182290,2184518..2184652,2186927..2187071,2187582..2187747,2190536..2190636,2190736..2191260,2192166..2192275))
location: region:2181958-2192275:-1
so has part: feature:2192166-2192275:-1:exon
so has part: feature:2190736-2191260:-1:exon
so has part: feature:2190536-2190636:-1:exon
so has part: feature:2187582-2187747:-1:exon
so has part: feature:2186927-2187071:-1:exon
so has part: feature:2184518-2184652:-1:exon
so has part: feature:2181958-2182290:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2192166-2192275:-1:exon

position:2192166:-1
position: 2192166
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2190736-2191260:-1:exon

position:2190736:-1
position: 2190736
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2191260:-1
position: 2191260
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2190536-2190636:-1:exon

position:2190536:-1
position: 2190536
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2190636:-1
position: 2190636
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2187582-2187747:-1:exon

position:2187582:-1
position: 2187582
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2187747:-1
position: 2187747
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2186927-2187071:-1:exon

position:2186927:-1
position: 2186927
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2187071:-1
position: 2187071
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2184518-2184652:-1:exon

position:2184518:-1
position: 2184518
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2184652:-1
position: 2184652
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:2181958-2182290:-1:exon

position:2182290:-1
position: 2182290
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

ppm1kb
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 451745
gene: ppm1kb
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein phosphatase 1K, mitochondrial
translation: MSAARLLRLARCSGPPVGSLHKAPVSLPFQRDGYKKEFPIFCRQLYGPSGRRCSNTRFDPDSSGHVTTWDSFGIWDNRIDEPILLPPSIRYGKPIPKVSLSKVGCASLIGQRKENEDRFQVSQMTDSILYFAVFDGHGGPEAADFCEKFMEKFIKDHVAEEDDLEEVLTKAFLEVDKAFARHLHFCPNGPGINAGTTATVALLRDGIELVVASVGDSRAMLCRKGKALKLTVDHTPERKDEKERVKKSGGFITWNSLGQPNVNGRLAMTRSIGDFDLKKTGVIAEPETKKIKLHHVHDSFLALTTDGINFIMNSQEICNVINQCHDPREAAQRISDQALQYGTEDNSTIIVVPFGAWGKHKSSDTSFSFSRSFVSSGRWA
SIO_010081: ppm1kb
subclass of: SO_0000673
so part of: ppm1kb
location: complement(join(2182159..2182290,2184518..2184652,2186927..2187071,2187582..2187747,2190536..2190636,2190736..2191199))
location: region:2182159-2191199:-1
so has part: feature:2190736-2191199:-1:exon
so has part: feature:2190536-2190636:-1:exon
so has part: feature:2187582-2187747:-1:exon
so has part: feature:2186927-2187071:-1:exon
so has part: feature:2184518-2184652:-1:exon
so has part: feature:2182159-2182290:-1:exon

XP_037546582.1
type: Protein
SIO_000068: ncbiprotein

position:2182159:-1
position: 2182159
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2191199:-1
position: 2191199
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2190736-2191199:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2190536-2190636:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2187582-2187747:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2186927-2187071:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2184518-2184652:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2182159-2182290:-1:exon

LOC119423013
type: Gene
subclass of: SO_0000704
RO_0002162: 451745
gene: LOC119423013
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2194983..2207112
location: region:2194983-2207112:1
so has part: feature:2194983-2207112:1:exon
subclass of: SO_0000010

119423013
type: Gene
SIO_000068: ncbigene

position:2194983:1
position: 2194983
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2207112:1
position: 2207112
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2194983-2207112:1:exon

LOC119423013
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 451745
gene: LOC119423013
product: probable E3 ubiquitin-protein ligase HERC3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 87% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_037690425.1
SIO_010081: LOC119423013
subclass of: SO_0000673
so part of: LOC119423013
location: join(2194983..2195205,2196809..2196965,2197433..2197509,2199926..2200147,2201538..2201629,2202823..2202953,2206043..2206191,2207054..2207112)
location: region:2194983-2207112:1
so has part: feature:2194983-2195205:1:exon
so has part: feature:2196809-2196965:1:exon
so has part: feature:2197433-2197509:1:exon
so has part: feature:2199926-2200147:1:exon
so has part: feature:2201538-2201629:1:exon
so has part: feature:2202823-2202953:1:exon
so has part: feature:2206043-2206191:1:exon
so has part: feature:2207054-2207112:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2194983-2195205:1:exon

position:2195205:1
position: 2195205
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2196809-2196965:1:exon

position:2196809:1
position: 2196809
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2196965:1
position: 2196965
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2197433-2197509:1:exon

position:2197433:1
position: 2197433
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2197509:1
position: 2197509
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2199926-2200147:1:exon

position:2199926:1
position: 2199926
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2200147:1
position: 2200147
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2201538-2201629:1:exon

position:2201538:1
position: 2201538
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2201629:1
position: 2201629
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2202823-2202953:1:exon

position:2202823:1
position: 2202823
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2202953:1
position: 2202953
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:2206043-2206191:1:exon

position:2206043:1
position: 2206043
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2206191:1
position: 2206191
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:2207054-2207112:1:exon

position:2207054:1
position: 2207054
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC119423013
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 451745
gene: LOC119423013
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: probable E3 ubiquitin-protein ligase HERC3
translation: MLCWGNARDGQLGIGVERNPVFGPRDCHVLSGRGLKEVACGGQHTLFLLHDGSVYTCGSNSCGQLGRNNDETSPELVVALDTQKITMVSCGRAHSMAINDQGQVFAWGAGEGGQLGLETVEIVRIPRLVKRLCDHSISQVMCGNQHCMALSRDGQLFTWGQNTNGQLGLGRGEPSKLSPHPLKSLAGIPLAQITAGGDHSFALSLSGAVFGWGKNRAGQLGLNDKQDRAVPCHIKFLRSQKVVYISCGAEHTAALTKDGGLFTFGDGSWGQLGHGSTNNELLPRRVLELMGTEVFQIACGRYHTLALAPSSSTVYAFGCNSHGQLGTGLLGDSRSLFPIKASFLTGNLQRVELGASVPVGSGASSFCDS
SIO_010081: LOC119423013
subclass of: SO_0000673
so part of: LOC119423013
location: join(2194983..2195205,2196809..2196965,2197433..2197509,2199926..2200147,2201538..2201629,2202823..2202953,2206043..2206191,2207054..2207112)
location: region:2194983-2207112:1
so has part: feature:2194983-2195205:1:exon
so has part: feature:2196809-2196965:1:exon
so has part: feature:2197433-2197509:1:exon
so has part: feature:2199926-2200147:1:exon
so has part: feature:2201538-2201629:1:exon
so has part: feature:2202823-2202953:1:exon
so has part: feature:2206043-2206191:1:exon
so has part: feature:2207054-2207112:1:exon

XP_037546353.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2194983-2195205:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2196809-2196965:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2197433-2197509:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2199926-2200147:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2201538-2201629:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2202823-2202953:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2206043-2206191:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2207054-2207112:1:exon

fam13a
type: Gene
subclass of: SO_0000704
RO_0002162: 451745
gene: fam13a
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2233954..2256160)
location: region:2233954-2256160:-1
so has part: feature:2233954-2256160:-1:exon
subclass of: SO_0000010

119423245
type: Gene
SIO_000068: ncbigene

position:2233954:-1
position: 2233954
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2256160:-1
position: 2256160
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2233954-2256160:-1:exon

fam13a
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 451745
gene: fam13a
product: family with sequence similarity 13 member A, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_037690657.1
SIO_010081: fam13a
subclass of: SO_0000673
so part of: fam13a
location: complement(join(2233954..2234509,2234588..2234689,2238765..2238961,2245845..2245940,2246160..2246243,2246334..2246539,2246620..2246701,2247241..2247382,2247467..2247680,2255889..2256160))
location: region:2233954-2256160:-1
so has part: feature:2255889-2256160:-1:exon
so has part: feature:2247467-2247680:-1:exon
so has part: feature:2247241-2247382:-1:exon
so has part: feature:2246620-2246701:-1:exon
so has part: feature:2246334-2246539:-1:exon
so has part: feature:2246160-2246243:-1:exon
so has part: feature:2245845-2245940:-1:exon
so has part: feature:2238765-2238961:-1:exon
so has part: feature:2234588-2234689:-1:exon
so has part: feature:2233954-2234509:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2255889-2256160:-1:exon

position:2255889:-1
position: 2255889
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2247467-2247680:-1:exon

position:2247467:-1
position: 2247467
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2247680:-1
position: 2247680
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2247241-2247382:-1:exon

position:2247241:-1
position: 2247241
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2247382:-1
position: 2247382
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2246620-2246701:-1:exon

position:2246620:-1
position: 2246620
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2246701:-1
position: 2246701
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2246334-2246539:-1:exon

position:2246334:-1
position: 2246334
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2246539:-1
position: 2246539
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2246160-2246243:-1:exon

position:2246160:-1
position: 2246160
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2246243:-1
position: 2246243
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:2245845-2245940:-1:exon

position:2245845:-1
position: 2245845
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2245940:-1
position: 2245940
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:2238765-2238961:-1:exon

position:2238765:-1
position: 2238765
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2238961:-1
position: 2238961
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:2234588-2234689:-1:exon

position:2234588:-1
position: 2234588
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2234689:-1
position: 2234689
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:2233954-2234509:-1:exon

position:2234509:-1
position: 2234509
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

fam13a
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 451745
gene: fam13a
product: family with sequence similarity 13 member A, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 14 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_037690656.1
SIO_010081: fam13a
subclass of: SO_0000673
so part of: fam13a
location: complement(join(2233954..2234509,2234588..2234689,2238765..2238961,2239410..2239493,2245845..2245940,2246160..2246243,2246334..2246539,2246620..2246701,2247241..2247382,2247467..2247680,2255889..2256160))
location: region:2233954-2256160:-1
so has part: feature:2255889-2256160:-1:exon
so has part: feature:2247467-2247680:-1:exon
so has part: feature:2247241-2247382:-1:exon
so has part: feature:2246620-2246701:-1:exon
so has part: feature:2246334-2246539:-1:exon
so has part: feature:2246160-2246243:-1:exon
so has part: feature:2245845-2245940:-1:exon
so has part: feature:2239410-2239493:-1:exon
so has part: feature:2238765-2238961:-1:exon
so has part: feature:2234588-2234689:-1:exon
so has part: feature:2233954-2234509:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2255889-2256160:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2247467-2247680:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2247241-2247382:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2246620-2246701:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2246334-2246539:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2246160-2246243:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2245845-2245940:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2239410-2239493:-1:exon

position:2239410:-1
position: 2239410
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2239493:-1
position: 2239493
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:2238765-2238961:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2234588-2234689:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2233954-2234509:-1:exon

fam13a
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 451745
gene: fam13a
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein FAM13A isoform X2
translation: MVVQTLRMKIQDSSVACDPAGRIGSGEVHVSEPDCEDVPRLDMKALTEDGGSWGEPILACPLQRESTDQEEAQLSPHAVGRPIRQLLEEESDPMVSPRFYAYGHCQQYVDDTEVPPSPPNAHSFITRKRSSSLGSCDDEREELTSAQLTKRIHVLKKKIHRFEEKFEEDRKYRPSHSDKVANPEVLRWVNELAQLRKELKERKLIKSEEDLPPQTRQRSNTLPKSFGSQLDKKPQQEKAPKPPVENTLEFILKKLQEKREEMNRPEDIKDMTREQIGAEKVALQKALLHYESIHGRPVTKNERQFMKPMYDRYRLVKQILCRATTIPIIEEEDGSEDDSDTKAQLNVTIRPELGVFIFMDPMDEEVDGFISPVDELSPSKTSGDMDLSNLHSASTQELVEQLQETREEKKRIRKNLKEFEDQFFRQNGRTVQKEDRSPLADEYHEYKHIKAKLRLLEVLISKRDSSKFI
SIO_010081: fam13a
subclass of: SO_0000673
so part of: fam13a
location: complement(join(2234386..2234509,2234588..2234689,2238765..2238961,2245845..2245940,2246160..2246243,2246334..2246539,2246620..2246701,2247241..2247382,2247467..2247680,2255889..2256051))
location: region:2234386-2256051:-1
so has part: feature:2255889-2256051:-1:exon
so has part: feature:2247467-2247680:-1:exon
so has part: feature:2247241-2247382:-1:exon
so has part: feature:2246620-2246701:-1:exon
so has part: feature:2246334-2246539:-1:exon
so has part: feature:2246160-2246243:-1:exon
so has part: feature:2245845-2245940:-1:exon
so has part: feature:2238765-2238961:-1:exon
so has part: feature:2234588-2234689:-1:exon
so has part: feature:2234386-2234509:-1:exon

XP_037546585.1
type: Protein
SIO_000068: ncbiprotein

position:2234386:-1
position: 2234386
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2256051:-1
position: 2256051
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2255889-2256051:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2247467-2247680:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2247241-2247382:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2246620-2246701:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2246334-2246539:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2246160-2246243:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2245845-2245940:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2238765-2238961:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2234588-2234689:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2234386-2234509:-1:exon

fam13a
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 451745
gene: fam13a
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein FAM13A isoform X1
translation: MVVQTLRMKIQDSSVACDPAGRIGSGEVHVSEPDCEDVPRLDMKALTEDGGSWGEPILACPLQRESTDQEEAQLSPHAVGRPIRQLLEEESDPMVSPRFYAYGHCQQYVDDTEVPPSPPNAHSFITRKRSSSLGSCDDEREELTSAQLTKRIHVLKKKIHRFEEKFEEDRKYRPSHSDKVANPEVLRWVNELAQLRKELKERKLIKSEEDLPPQTRQRSNTLPKSFGSQLDKKPQQEKAPKPPVENTLEFILKKLQEKREEMNRPEDIKDMTREQIGAEKVALQKALLHYESIHGRPVTKNERQFMKPMYDRYRLVKQILCRATTIPIIGSPSSKRRGPLLQPIIEGETALFFDDIKEEEDGSEDDSDTKAQLNVTIRPELGVFIFMDPMDEEVDGFISPVDELSPSKTSGDMDLSNLHSASTQELVEQLQETREEKKRIRKNLKEFEDQFFRQNGRTVQKEDRSPLADEYHEYKHIKAKLRLLEVLISKRDSSKFI
SIO_010081: fam13a
subclass of: SO_0000673
so part of: fam13a
location: complement(join(2234386..2234509,2234588..2234689,2238765..2238961,2239410..2239493,2245845..2245940,2246160..2246243,2246334..2246539,2246620..2246701,2247241..2247382,2247467..2247680,2255889..2256051))
location: region:2234386-2256051:-1
so has part: feature:2255889-2256051:-1:exon
so has part: feature:2247467-2247680:-1:exon
so has part: feature:2247241-2247382:-1:exon
so has part: feature:2246620-2246701:-1:exon
so has part: feature:2246334-2246539:-1:exon
so has part: feature:2246160-2246243:-1:exon
so has part: feature:2245845-2245940:-1:exon
so has part: feature:2239410-2239493:-1:exon
so has part: feature:2238765-2238961:-1:exon
so has part: feature:2234588-2234689:-1:exon
so has part: feature:2234386-2234509:-1:exon

XP_037546584.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2255889-2256051:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2247467-2247680:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2247241-2247382:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2246620-2246701:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2246334-2246539:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2246160-2246243:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2245845-2245940:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2239410-2239493:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2238765-2238961:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2234588-2234689:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2234386-2234509:-1:exon

gprin3b
type: Gene
subclass of: SO_0000704
RO_0002162: 451745
gene: gprin3b
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2282445..2289566)
location: region:2282445-2289566:-1
so has part: feature:2282445-2289566:-1:exon
subclass of: SO_0000010

119423243
type: Gene
SIO_000068: ncbigene

position:2282445:-1
position: 2282445
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2289566:-1
position: 2289566
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2282445-2289566:-1:exon

gprin3b
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 451745
gene: gprin3b
product: GPRIN family member 3b
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 91% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_037690655.1
SIO_010081: gprin3b
subclass of: SO_0000673
so part of: gprin3b
location: complement(join(2282445..2284667,2289488..2289566))
location: region:2282445-2289566:-1
so has part: feature:2289488-2289566:-1:exon
so has part: feature:2282445-2284667:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2289488-2289566:-1:exon

position:2289488:-1
position: 2289488
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2282445-2284667:-1:exon

position:2284667:-1
position: 2284667
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

gprin3b
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 451745
gene: gprin3b
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: G protein-regulated inducer of neurite outgrowth 3
translation: METNPKQTVTVQMVPQLAVVDLLGMKESNANWEKEPHLKVSQACLNAPLTSSDPQNSPFLTSASANTFPPVQNTASKGGQPVMDKPAQDNKNQTKSEPVDGGEQSKQSLTGQAAGDQKDSNANLKMQSPTRDKDVCKTSLSTGVSGSKVDVHNNASRVSASEEKQLTVPSTAPTSSDKQVPQKDDKLRNTAAETREVKERTAASRNTETAAAQKTDDLSCLTASATPKQSFAPLTPLASIKPPSTSEETESESKPKSLCSSHPEQRFPLAEASEVSSDKHRPTSVESDCSALAPAAQNMLACGQVTEETSQTEAAVSAGERHSELHRDASTMTSFLPSSPAKQRHSVEVQAVANMSNKSVATSPSLLPLAAVHRPSSSAIPLEETQRLAVMFQANNSLDCHQIYTSSFSTNQVPEKLVVRTEMGSNQKAGFISEALPQQLDSRSGAKPKEVCERSGVCNIQPVYQISIEHSSHRKHGETSASLHETGAETSLAQTSFPLGVSTSPGTAAACADRDDATTSPAAVTTEAEQAPLTTTTSAENKESVKEAKSSKQDAEPERNDEDYDQSGKQKEKSIHDVVWDEQGMTWEVYGASVDPESLGFAIQSHLQCKIREQEKKLMAQASFRKSFSGGDSPQHDKKNKRRQQNVFRSMLQNVRRPNCCVRPPPSSVLE
SIO_010081: gprin3b
subclass of: SO_0000673
so part of: gprin3b
location: complement(2282559..2284574)
location: region:2282559-2284574:-1
so has part: feature:2282559-2284574:-1:exon

XP_037546583.1
type: Protein
SIO_000068: ncbiprotein

position:2282559:-1
position: 2282559
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2284574:-1
position: 2284574
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2282559-2284574:-1:exon

LOC119423262
type: Gene
subclass of: SO_0000704
RO_0002162: 451745
gene: LOC119423262
note: Derived by automated computational analysis using gene prediction method: cmsearch.
pseudo: true
so part of: sequence
location: complement(2291758..2291876)
location: region:2291758-2291876:-1
so has part: feature:2291758-2291876:-1:exon

119423262
type: Gene
SIO_000068: ncbigene

position:2291758:-1
position: 2291758
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2291876:-1
position: 2291876
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2291758-2291876:-1:exon

LOC119423262
type: Exon
subclass of: SO_0000147
RO_0002162: 451745
gene: LOC119423262
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00001
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
pseudo: true
SIO_010081: LOC119423262
subclass of: SO_0000673
so part of: LOC119423262
location: complement(2291758..2291876)
location: region:2291758-2291876:-1
so has part: feature:2291758-2291876:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2291758-2291876:-1:exon

elmod2
type: Gene
subclass of: SO_0000704
RO_0002162: 451745
gene: elmod2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2293218..2300071
location: region:2293218-2300071:1
so has part: feature:2293218-2300071:1:exon
subclass of: SO_0000010

119423248
type: Gene
SIO_000068: ncbigene

position:2293218:1
position: 2293218
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2300071:1
position: 2300071
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2293218-2300071:1:exon

elmod2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 451745
gene: elmod2
product: ELMO/CED-12 domain containing 2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 12 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_037690665.1
SIO_010081: elmod2
subclass of: SO_0000673
so part of: elmod2
location: join(2293218..2293300,2295047..2295193,2295268..2295296,2297141..2297238,2297345..2297474,2297740..2297873,2299105..2299173,2299259..2299392,2299462..2300071)
location: region:2293218-2300071:1
so has part: feature:2293218-2293300:1:exon
so has part: feature:2295047-2295193:1:exon
so has part: feature:2295268-2295296:1:exon
so has part: feature:2297141-2297238:1:exon
so has part: feature:2297345-2297474:1:exon
so has part: feature:2297740-2297873:1:exon
so has part: feature:2299105-2299173:1:exon
so has part: feature:2299259-2299392:1:exon
so has part: feature:2299462-2300071:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2293218-2293300:1:exon

position:2293300:1
position: 2293300
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2295047-2295193:1:exon

position:2295047:1
position: 2295047
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2295193:1
position: 2295193
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2295268-2295296:1:exon

position:2295268:1
position: 2295268
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2295296:1
position: 2295296
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2297141-2297238:1:exon

position:2297141:1
position: 2297141
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2297238:1
position: 2297238
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2297345-2297474:1:exon

position:2297345:1
position: 2297345
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2297474:1
position: 2297474
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2297740-2297873:1:exon

position:2297740:1
position: 2297740
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2297873:1
position: 2297873
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:2299105-2299173:1:exon

position:2299105:1
position: 2299105
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2299173:1
position: 2299173
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:2299259-2299392:1:exon

position:2299259:1
position: 2299259
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2299392:1
position: 2299392
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:2299462-2300071:1:exon

position:2299462:1
position: 2299462
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

elmod2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 451745
gene: elmod2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ELMO domain-containing protein 2
translation: MFGSIWQYVYTSFLRFWLKWLIRQVTGTCELQRLFSKYTPGASRTTRTENSLQASKNQVLRNALKTSSDHIEQCVEHIMKEKDINPQKDSLFRGNLHICLLQIVGYSSLYTSVEDLRKEVFSSENPEHEAMLLKLWDTLMPTVKLESRITKQWGDIGFQGDDPKTDFRGMGLLGLINLVFFSENYTAEARQVLSHANHPKLGYSYAIVGINVTEMAYSLLKSGALKPHFYNTVHGTPELEHFHQLYCYLVYEFDRFWVAEEPESIMQFNHYREKFHDKVKSRLQDPDVALSLTAGSH
SIO_010081: elmod2
subclass of: SO_0000673
so part of: elmod2
location: join(2295049..2295193,2295268..2295296,2297141..2297238,2297345..2297474,2297740..2297873,2299105..2299173,2299259..2299392,2299462..2299616)
location: region:2295049-2299616:1
so has part: feature:2295049-2295193:1:exon
so has part: feature:2295268-2295296:1:exon
so has part: feature:2297141-2297238:1:exon
so has part: feature:2297345-2297474:1:exon
so has part: feature:2297740-2297873:1:exon
so has part: feature:2299105-2299173:1:exon
so has part: feature:2299259-2299392:1:exon
so has part: feature:2299462-2299616:1:exon

XP_037546593.1
type: Protein
SIO_000068: ncbiprotein

position:2295049:1
position: 2295049
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2299616:1
position: 2299616
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2295049-2295193:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2295268-2295296:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2297141-2297238:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2297345-2297474:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2297740-2297873:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2299105-2299173:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2299259-2299392:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2299462-2299616:1:exon

ucp1
type: Gene
subclass of: SO_0000704
RO_0002162: 451745
gene: ucp1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2301077..2303863)
location: region:2301077-2303863:-1
so has part: feature:2301077-2303863:-1:exon
subclass of: SO_0000010

119423247
type: Gene
SIO_000068: ncbigene

position:2301077:-1
position: 2301077
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2303863:-1
position: 2303863
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2301077-2303863:-1:exon

ucp1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 451745
gene: ucp1
product: uncoupling protein 1, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 82% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_037690664.1
SIO_010081: ucp1
subclass of: SO_0000673
so part of: ucp1
location: complement(join(2301077..2301284,2301387..2301567,2302284..2302478,2303337..2303535,2303738..2303863))
location: region:2301077-2303863:-1
so has part: feature:2303738-2303863:-1:exon
so has part: feature:2303337-2303535:-1:exon
so has part: feature:2302284-2302478:-1:exon
so has part: feature:2301387-2301567:-1:exon
so has part: feature:2301077-2301284:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2303738-2303863:-1:exon

position:2303738:-1
position: 2303738
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2303337-2303535:-1:exon

position:2303337:-1
position: 2303337
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2303535:-1
position: 2303535
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2302284-2302478:-1:exon

position:2302284:-1
position: 2302284
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2302478:-1
position: 2302478
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2301387-2301567:-1:exon

position:2301387:-1
position: 2301387
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2301567:-1
position: 2301567
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2301077-2301284:-1:exon

position:2301284:-1
position: 2301284
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

ucp1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 451745
gene: ucp1
product: uncoupling protein 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 33 Proteins, and 87% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_037690661.1
SIO_010081: ucp1
subclass of: SO_0000673
so part of: ucp1
location: complement(join(2301077..2301284,2301387..2301567,2302105..2302206,2302284..2302478,2303337..2303535,2303738..2303863))
location: region:2301077-2303863:-1
so has part: feature:2303738-2303863:-1:exon
so has part: feature:2303337-2303535:-1:exon
so has part: feature:2302284-2302478:-1:exon
so has part: feature:2302105-2302206:-1:exon
so has part: feature:2301387-2301567:-1:exon
so has part: feature:2301077-2301284:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2303738-2303863:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2303337-2303535:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2302284-2302478:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2302105-2302206:-1:exon

position:2302105:-1
position: 2302105
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2302206:-1
position: 2302206
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2301387-2301567:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2301077-2301284:-1:exon

ucp1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 451745
gene: ucp1
product: uncoupling protein 1, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 86% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_037690663.1
SIO_010081: ucp1
subclass of: SO_0000673
so part of: ucp1
location: complement(join(2301077..2301284,2301387..2301567,2302105..2302206,2302284..2302474,2302699..2302708,2303337..2303535,2303738..2303863))
location: region:2301077-2303863:-1
so has part: feature:2303738-2303863:-1:exon
so has part: feature:2303337-2303535:-1:exon
so has part: feature:2302699-2302708:-1:exon
so has part: feature:2302284-2302474:-1:exon
so has part: feature:2302105-2302206:-1:exon
so has part: feature:2301387-2301567:-1:exon
so has part: feature:2301077-2301284:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2303738-2303863:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2303337-2303535:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2302699-2302708:-1:exon

position:2302699:-1
position: 2302699
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2302708:-1
position: 2302708
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2302284-2302474:-1:exon

position:2302474:-1
position: 2302474
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2302105-2302206:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2301387-2301567:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2301077-2301284:-1:exon

ucp1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 451745
gene: ucp1
product: uncoupling protein 1, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 17 Proteins, and 86% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_037690662.1
SIO_010081: ucp1
subclass of: SO_0000673
so part of: ucp1
location: complement(join(2301077..2301284,2301387..2301567,2302105..2302206,2302284..2302478,2302757..2302768,2303337..2303535,2303738..2303863))
location: region:2301077-2303863:-1
so has part: feature:2303738-2303863:-1:exon
so has part: feature:2303337-2303535:-1:exon
so has part: feature:2302757-2302768:-1:exon
so has part: feature:2302284-2302478:-1:exon
so has part: feature:2302105-2302206:-1:exon
so has part: feature:2301387-2301567:-1:exon
so has part: feature:2301077-2301284:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2303738-2303863:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2303337-2303535:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2302757-2302768:-1:exon

position:2302757:-1
position: 2302757
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2302768:-1
position: 2302768
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2302284-2302478:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2302105-2302206:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2301387-2301567:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2301077-2301284:-1:exon

ucp1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 451745
gene: ucp1
product: uncoupling protein 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 18 Proteins, and 86% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_037690660.1
SIO_010081: ucp1
subclass of: SO_0000673
so part of: ucp1
location: complement(join(2301077..2301284,2301387..2301567,2302105..2302206,2302284..2302474,2303324..2303535,2303738..2303863))
location: region:2301077-2303863:-1
so has part: feature:2303738-2303863:-1:exon
so has part: feature:2303324-2303535:-1:exon
so has part: feature:2302284-2302474:-1:exon
so has part: feature:2302105-2302206:-1:exon
so has part: feature:2301387-2301567:-1:exon
so has part: feature:2301077-2301284:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2303738-2303863:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2303324-2303535:-1:exon

position:2303324:-1
position: 2303324
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2302284-2302474:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2302105-2302206:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2301387-2301567:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2301077-2301284:-1:exon

ucp1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 451745
gene: ucp1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: mitochondrial brown fat uncoupling protein 1 isoform X5
translation: MVGLKPSDVPPPLGVKMASAAAAACVADIVTFPLDTAKVRLQIQGEKQAVGGIRYRGVFGTISTMVRTEGPKSLYNGLVAGLQRQVCFASIRIGLYDSVKNFYSGGKDNSVLVRILAGCTTGAMAVSVAQPTDVVKVRFQAQMNLNGSARRYSGTMQAYRHIFLNEGMRGLWKDNLPCHFVSAFGAGFVTTVVASPVDVVKTRYMNSPLGQYKSAMNCAWTMMTKEGPTAFYKGFMPSFLRLGSWNVVMFVSFEQIKRAMMITKKRIEATN
SIO_010081: ucp1
subclass of: SO_0000673
so part of: ucp1
location: complement(join(2301170..2301284,2301387..2301567,2302284..2302478,2303337..2303535,2303738..2303863))
location: region:2301170-2303863:-1
so has part: feature:2303738-2303863:-1:exon
so has part: feature:2303337-2303535:-1:exon
so has part: feature:2302284-2302478:-1:exon
so has part: feature:2301387-2301567:-1:exon
so has part: feature:2301170-2301284:-1:exon

XP_037546592.1
type: Protein
SIO_000068: ncbiprotein

position:2301170:-1
position: 2301170
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2303738-2303863:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2303337-2303535:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2302284-2302478:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2301387-2301567:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2301170-2301284:-1:exon

ucp1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 451745
gene: ucp1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: mitochondrial brown fat uncoupling protein 1 isoform X2
translation: MVGLKPSDVPPPLGVKMASAAAAACVADIVTFPLDTAKVRLQIQGEKQAVGGIRYRGVFGTISTMVRTEGPKSLYNGLVAGLQRQVCFASIRIGLYDSVKNFYSGGKDNSVLVRILAGCTTGAMAVSVAQPTDVVKVRFQAQMNLNGSARRYSGTMQAYRHIFLNEGMRGLWKGMLPNITRNALVNCTELVTYDLIKEAILRHKLMSDNLPCHFVSAFGAGFVTTVVASPVDVVKTRYMNSPLGQYKSAMNCAWTMMTKEGPTAFYKGFMPSFLRLGSWNVVMFVSFEQIKRAMMITKKRIEATN
SIO_010081: ucp1
subclass of: SO_0000673
so part of: ucp1
location: complement(join(2301170..2301284,2301387..2301567,2302105..2302206,2302284..2302478,2303337..2303535,2303738..2303863))
location: region:2301170-2303863:-1
so has part: feature:2303738-2303863:-1:exon
so has part: feature:2303337-2303535:-1:exon
so has part: feature:2302284-2302478:-1:exon
so has part: feature:2302105-2302206:-1:exon
so has part: feature:2301387-2301567:-1:exon
so has part: feature:2301170-2301284:-1:exon

XP_037546589.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2303738-2303863:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2303337-2303535:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2302284-2302478:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2302105-2302206:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2301387-2301567:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2301170-2301284:-1:exon

ucp1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 451745
gene: ucp1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: mitochondrial brown fat uncoupling protein 1 isoform X4
translation: MVGLKPSDVPPPLGVKMASAAAAACVADIVTFPLDTAKVRLQIQGEKQAVGGIRYRGVFGTISTMVRTEGPKSLYNGLVAGLQRQVCFASIRIGLYDSVKNFYSGGKDTAWSVLVRILAGCTTGAMAVSVAQPTDVVKVRFQAQMNLNGSARRYSGTMQAYRHIFLNEGMRGLWKGMLPNITRNALVNCTELVTYDLIKEAILRHKLMSDNLPCHFVSAFGAGFVTTVVASPVDVVKTRYMNSPLGQYKSAMNCAWTMMTKEGPTAFYKGFMPSFLRLGSWNVVMFVSFEQIKRAMMITKKRIEATN
SIO_010081: ucp1
subclass of: SO_0000673
so part of: ucp1
location: complement(join(2301170..2301284,2301387..2301567,2302105..2302206,2302284..2302474,2302699..2302708,2303337..2303535,2303738..2303863))
location: region:2301170-2303863:-1
so has part: feature:2303738-2303863:-1:exon
so has part: feature:2303337-2303535:-1:exon
so has part: feature:2302699-2302708:-1:exon
so has part: feature:2302284-2302474:-1:exon
so has part: feature:2302105-2302206:-1:exon
so has part: feature:2301387-2301567:-1:exon
so has part: feature:2301170-2301284:-1:exon

XP_037546591.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2303738-2303863:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2303337-2303535:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2302699-2302708:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2302284-2302474:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2302105-2302206:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2301387-2301567:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2301170-2301284:-1:exon

ucp1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 451745
gene: ucp1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: mitochondrial brown fat uncoupling protein 1 isoform X3
translation: MVGLKPSDVPPPLGVKMASAAAAACVADIVTFPLDTAKVRLQIQGEKQAVGGIRYRGVFGTISTMVRTEGPKSLYNGLVAGLQRQVCFASIRIGLYDSVKNFYSGGKDMVGVNSVLVRILAGCTTGAMAVSVAQPTDVVKVRFQAQMNLNGSARRYSGTMQAYRHIFLNEGMRGLWKGMLPNITRNALVNCTELVTYDLIKEAILRHKLMSDNLPCHFVSAFGAGFVTTVVASPVDVVKTRYMNSPLGQYKSAMNCAWTMMTKEGPTAFYKGFMPSFLRLGSWNVVMFVSFEQIKRAMMITKKRIEATN
SIO_010081: ucp1
subclass of: SO_0000673
so part of: ucp1
location: complement(join(2301170..2301284,2301387..2301567,2302105..2302206,2302284..2302478,2302757..2302768,2303337..2303535,2303738..2303863))
location: region:2301170-2303863:-1
so has part: feature:2303738-2303863:-1:exon
so has part: feature:2303337-2303535:-1:exon
so has part: feature:2302757-2302768:-1:exon
so has part: feature:2302284-2302478:-1:exon
so has part: feature:2302105-2302206:-1:exon
so has part: feature:2301387-2301567:-1:exon
so has part: feature:2301170-2301284:-1:exon

XP_037546590.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2303738-2303863:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2303337-2303535:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2302757-2302768:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2302284-2302478:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2302105-2302206:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2301387-2301567:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2301170-2301284:-1:exon

ucp1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 451745
gene: ucp1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: mitochondrial brown fat uncoupling protein 1 isoform X1
translation: MVGLKPSDVPPPLGVKMASAAAAACVADIVTFPLDTAKVRLQIQGEKQAVGGIRYRGVFGTISTMVRTEGPKSLYNGLVAGLQRQVCFASIRIGLYDSVKNFYSGGKDSKRLNVLVRILAGCTTGAMAVSVAQPTDVVKVRFQAQMNLNGSARRYSGTMQAYRHIFLNEGMRGLWKGMLPNITRNALVNCTELVTYDLIKEAILRHKLMSDNLPCHFVSAFGAGFVTTVVASPVDVVKTRYMNSPLGQYKSAMNCAWTMMTKEGPTAFYKGFMPSFLRLGSWNVVMFVSFEQIKRAMMITKKRIEATN
SIO_010081: ucp1
subclass of: SO_0000673
so part of: ucp1
location: complement(join(2301170..2301284,2301387..2301567,2302105..2302206,2302284..2302474,2303324..2303535,2303738..2303863))
location: region:2301170-2303863:-1
so has part: feature:2303738-2303863:-1:exon
so has part: feature:2303324-2303535:-1:exon
so has part: feature:2302284-2302474:-1:exon
so has part: feature:2302105-2302206:-1:exon
so has part: feature:2301387-2301567:-1:exon
so has part: feature:2301170-2301284:-1:exon

XP_037546588.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2303738-2303863:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2303324-2303535:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2302284-2302474:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2302105-2302206:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2301387-2301567:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2301170-2301284:-1:exon

znf330
type: Gene
subclass of: SO_0000704
RO_0002162: 451745
gene: znf330
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2309715..2340543
location: region:2309715-2340543:1
so has part: feature:2309715-2340543:1:exon
subclass of: SO_0000010

119423246
type: Gene
SIO_000068: ncbigene

position:2309715:1
position: 2309715
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2340543:1
position: 2340543
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2309715-2340543:1:exon

znf330
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 451745
gene: znf330
product: zinc finger protein 330
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 12 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_037690658.1
SIO_010081: znf330
subclass of: SO_0000673
so part of: znf330
location: join(2309715..2309779,2334594..2334741,2334815..2334834,2334918..2334988,2336634..2336710,2337423..2337549,2337635..2337739,2337856..2337902,2338607..2338724,2340030..2340543)
location: region:2309715-2340543:1
so has part: feature:2309715-2309779:1:exon
so has part: feature:2334594-2334741:1:exon
so has part: feature:2334815-2334834:1:exon
so has part: feature:2334918-2334988:1:exon
so has part: feature:2336634-2336710:1:exon
so has part: feature:2337423-2337549:1:exon
so has part: feature:2337635-2337739:1:exon
so has part: feature:2337856-2337902:1:exon
so has part: feature:2338607-2338724:1:exon
so has part: feature:2340030-2340543:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2309715-2309779:1:exon

position:2309779:1
position: 2309779
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2334594-2334741:1:exon

position:2334594:1
position: 2334594
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2334741:1
position: 2334741
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2334815-2334834:1:exon

position:2334815:1
position: 2334815
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2334834:1
position: 2334834
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2334918-2334988:1:exon

position:2334918:1
position: 2334918
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2334988:1
position: 2334988
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2336634-2336710:1:exon

position:2336634:1
position: 2336634
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2336710:1
position: 2336710
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2337423-2337549:1:exon

position:2337423:1
position: 2337423
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2337549:1
position: 2337549
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:2337635-2337739:1:exon

position:2337635:1
position: 2337635
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2337739:1
position: 2337739
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:2337856-2337902:1:exon

position:2337856:1
position: 2337856
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2337902:1
position: 2337902
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:2338607-2338724:1:exon

position:2338607:1
position: 2338607
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2338724:1
position: 2338724
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:2340030-2340543:1:exon

position:2340030:1
position: 2340030
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC119423014
type: Gene
subclass of: SO_0000704
RO_0002162: 451745
gene: LOC119423014
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(<2317348..2324061)
location: region:2317348-2324061:-1
so has part: feature:2317348-2324061:-1:exon
subclass of: SO_0000010

119423014
type: Gene
SIO_000068: ncbigene

position:2317348:-1
position: 2317348
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

position:2324061:-1
position: 2324061
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2317348-2324061:-1:exon

LOC119423014
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 451745
gene: LOC119423014
product: probable E3 ubiquitin-protein ligase HERC3
inference: similar to RNA sequence (same species):INSD:GELZ01008313.1
exception: annotated by transcript or proteomic data
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: added 450 bases not found in genome assembly; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 59% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_037690426.1
SIO_010081: LOC119423014
subclass of: SO_0000673
so part of: LOC119423014
location: complement(join(<2317348..2317430,2319038..2319101,2319995..2320161,2323656..2323799,2323891..2324061))
location: region:2317348-2324061:-1
so has part: feature:2323891-2324061:-1:exon
so has part: feature:2323656-2323799:-1:exon
so has part: feature:2319995-2320161:-1:exon
so has part: feature:2319038-2319101:-1:exon
so has part: feature:2317348-2317430:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2323891-2324061:-1:exon

position:2323891:-1
position: 2323891
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2323656-2323799:-1:exon

position:2323656:-1
position: 2323656
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2323799:-1
position: 2323799
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2319995-2320161:-1:exon

position:2319995:-1
position: 2319995
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2320161:-1
position: 2320161
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2319038-2319101:-1:exon

position:2319038:-1
position: 2319038
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2319101:-1
position: 2319101
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2317348-2317430:-1:exon

position:2317430:-1
position: 2317430
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC119423014
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 451745
gene: LOC119423014
inference: similar to RNA sequence (same species):INSD:GELZ01008313.1
exception: annotated by transcript or proteomic data
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: added 450 bases not found in genome assembly; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: probable E3 ubiquitin-protein ligase HERC3
translation: MAVSGANLHNVFMLLTLEPHLARNPYLVLHVRRNHLVSDTLRELTMYSDVDLKKPLKVIFDGEEAVDAGGVTKEFFLLLLKELMDPVYGMFTHYKESNLLWFSDTCFVEENWFHLVGIICGLAIYNSTVVDLHFPLLLYKKLLDVSPSLDDFKELSPTEARSLQELLDYEGDVEETFLLNFSITRESYGMMEVKELVPGGQSIAVDQNNRKQFVEAYLSYVFSDSVSEQYSAFSSGFLKVCGGEILSLFQPSELMAMVVGNNNYNWEEMEKNAVYRGEFTSAHPTVRLFWEVFHEFPLVKKKQFLLFLTGTDRIPIHGMGSLRIVIQSTPAEEHYLPVAHTCYNLLDMPCYQTKEILRR
SIO_010081: LOC119423014
subclass of: SO_0000673
so part of: LOC119423014
location: complement(join(<2317348..2317430,2319038..2319101,2319995..2320161,2323656..2323799,2323891..2324061))
location: region:2317348-2324061:-1
so has part: feature:2323891-2324061:-1:exon
so has part: feature:2323656-2323799:-1:exon
so has part: feature:2319995-2320161:-1:exon
so has part: feature:2319038-2319101:-1:exon
so has part: feature:2317348-2317430:-1:exon

XP_037546354.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2323891-2324061:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2323656-2323799:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2319995-2320161:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2319038-2319101:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2317348-2317430:-1:exon

znf330
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 451745
gene: znf330
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger protein 330
translation: MPKKKTGARKKAESRKEREKLSRANRELVDVAKHPCNFNMDCDKCQRKQKNRAFCYFCNSVQKLPICAQCGKTKCMKSSDCVIKHPGIHTTGLAMVGAVCDFCEAWVCHGRKCLSTHACACPLTDADCIECERGVWDHGGRIFRCSFCQNFLCEDDQFEHQASCQILQAETFKCISCNRLGQHSCLRCKVCYCDDHAKSKVFKQEKGKARPCPKCGHETQETKDLSMSTRTLKFGRQAGGDVYDDDDDYGASGYDAYWKNMAAEGGGAQQDNYGDDDYEEDDDDADDDDADDDDEEEEEEEEETPSKSLAELSLA
SIO_010081: znf330
subclass of: SO_0000673
so part of: znf330
location: join(2334622..2334741,2334815..2334834,2334918..2334988,2336634..2336710,2337423..2337549,2337635..2337739,2337856..2337902,2338607..2338724,2340030..2340292)
location: region:2334622-2340292:1
so has part: feature:2334622-2334741:1:exon
so has part: feature:2334815-2334834:1:exon
so has part: feature:2334918-2334988:1:exon
so has part: feature:2336634-2336710:1:exon
so has part: feature:2337423-2337549:1:exon
so has part: feature:2337635-2337739:1:exon
so has part: feature:2337856-2337902:1:exon
so has part: feature:2338607-2338724:1:exon
so has part: feature:2340030-2340292:1:exon

XP_037546586.1
type: Protein
SIO_000068: ncbiprotein

position:2334622:1
position: 2334622
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2340292:1
position: 2340292
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2334622-2334741:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2334815-2334834:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2334918-2334988:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2336634-2336710:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2337423-2337549:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2337635-2337739:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2337856-2337902:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2338607-2338724:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2340030-2340292:1:exon

zgc:172076
type: Gene
subclass of: SO_0000704
RO_0002162: 451745
gene: zgc:172076
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2354702..2367638
location: region:2354702-2367638:1
so has part: feature:2354702-2367638:1:exon
subclass of: SO_0000010

119422660
type: Gene
SIO_000068: ncbigene

position:2354702:1
position: 2354702
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2367638:1
position: 2367638
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2354702-2367638:1:exon

zgc:172076
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 451745
gene: zgc:172076
product: zgc:172076
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 12% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_037690046.1
SIO_010081: zgc:172076
subclass of: SO_0000673
so part of: zgc:172076
location: join(2354702..2354717,2355023..2355069,2356343..2356541,2357546..2357703,2358048..2358180,2359150..2359303,2364655..2364778,2365892..2366081,2367478..2367638)
location: region:2354702-2367638:1
so has part: feature:2354702-2354717:1:exon
so has part: feature:2355023-2355069:1:exon
so has part: feature:2356343-2356541:1:exon
so has part: feature:2357546-2357703:1:exon
so has part: feature:2358048-2358180:1:exon
so has part: feature:2359150-2359303:1:exon
so has part: feature:2364655-2364778:1:exon
so has part: feature:2365892-2366081:1:exon
so has part: feature:2367478-2367638:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2354702-2354717:1:exon

position:2354717:1
position: 2354717
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2355023-2355069:1:exon

position:2355023:1
position: 2355023
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2355069:1
position: 2355069
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2356343-2356541:1:exon

position:2356343:1
position: 2356343
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2356541:1
position: 2356541
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2357546-2357703:1:exon

position:2357546:1
position: 2357546
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2357703:1
position: 2357703
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2358048-2358180:1:exon

position:2358048:1
position: 2358048
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2358180:1
position: 2358180
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2359150-2359303:1:exon

position:2359150:1
position: 2359150
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2359303:1
position: 2359303
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:2364655-2364778:1:exon

position:2364655:1
position: 2364655
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2364778:1
position: 2364778
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:2365892-2366081:1:exon

position:2365892:1
position: 2365892
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2366081:1
position: 2366081
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:2367478-2367638:1:exon

position:2367478:1
position: 2367478
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

zgc:172076
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 451745
gene: zgc:172076
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zgc:172076
translation: MWKVKPPVTFPTESRHRAVLESLAPPDPMSRFHLRRGSPEEEYPDLRRNCTWMGRILTPAMYSRQFNRCTNSGVIFDDVIRPGIEEPGDFSDPISVGCVAGDSQSYVLFCDFFDRVIEAHHDHKITSQTPKSDFNYNNLKGGDDLDRSYAVRCEVSVVRGVEDFCFPTHCSRGERRQLLLLAKTALQRLEEELPGDLLLLKELSQEQQLKQNLKPPSSLQLRIGVARDWPDARAVWVSKDGSFMVWVNMEDHLKLVSVCHDANVAEAFKSICINLQKLQEYYRELRHQFIWKQQLGWVASSPADVGTGLRISIYLQLQHLPYHKRLQDVLRRLRMCMDKTEISRQHRVSNAATFGLSEVELTQLVVDGVQLLIAMEKRLEKEQDIHELVPTQK
SIO_010081: zgc:172076
subclass of: SO_0000673
so part of: zgc:172076
location: join(2354702..2354717,2355023..2355069,2356343..2356541,2357546..2357703,2358048..2358180,2359150..2359303,2364655..2364778,2365892..2366081,2367478..2367638)
location: region:2354702-2367638:1
so has part: feature:2354702-2354717:1:exon
so has part: feature:2355023-2355069:1:exon
so has part: feature:2356343-2356541:1:exon
so has part: feature:2357546-2357703:1:exon
so has part: feature:2358048-2358180:1:exon
so has part: feature:2359150-2359303:1:exon
so has part: feature:2364655-2364778:1:exon
so has part: feature:2365892-2366081:1:exon
so has part: feature:2367478-2367638:1:exon

XP_037545974.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2354702-2354717:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2355023-2355069:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2356343-2356541:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2357546-2357703:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2358048-2358180:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2359150-2359303:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2364655-2364778:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2365892-2366081:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2367478-2367638:1:exon

zgc:158270
type: Gene
subclass of: SO_0000704
RO_0002162: 451745
gene: zgc:158270
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2373135..2399996)
location: region:2373135-2399996:-1
so has part: feature:2373135-2399996:-1:exon
subclass of: SO_0000010

119422662
type: Gene
SIO_000068: ncbigene

position:2373135:-1
position: 2373135
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2399996:-1
position: 2399996
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2373135-2399996:-1:exon

zgc:158270
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 451745
gene: zgc:158270
product: uncharacterized protein LOC791213 homolog, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 32 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_037690048.1
SIO_010081: zgc:158270
subclass of: SO_0000673
so part of: zgc:158270
location: complement(join(2373135..2373319,2375475..2375906,2375984..2376055,2378583..2378639,2380622..2380749,2381230..2381368,2381930..2382022,2382925..2382981,2383754..2383804,2385046..2385150,2385305..2385439,2391862..2392145,2399918..2399996))
location: region:2373135-2399996:-1
so has part: feature:2399918-2399996:-1:exon
so has part: feature:2391862-2392145:-1:exon
so has part: feature:2385305-2385439:-1:exon
so has part: feature:2385046-2385150:-1:exon
so has part: feature:2383754-2383804:-1:exon
so has part: feature:2382925-2382981:-1:exon
so has part: feature:2381930-2382022:-1:exon
so has part: feature:2381230-2381368:-1:exon
so has part: feature:2380622-2380749:-1:exon
so has part: feature:2378583-2378639:-1:exon
so has part: feature:2375984-2376055:-1:exon
so has part: feature:2375475-2375906:-1:exon
so has part: feature:2373135-2373319:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2399918-2399996:-1:exon

position:2399918:-1
position: 2399918
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2391862-2392145:-1:exon

position:2391862:-1
position: 2391862
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2392145:-1
position: 2392145
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2385305-2385439:-1:exon

position:2385305:-1
position: 2385305
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2385439:-1
position: 2385439
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2385046-2385150:-1:exon

position:2385046:-1
position: 2385046
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2385150:-1
position: 2385150
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2383754-2383804:-1:exon

position:2383754:-1
position: 2383754
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2383804:-1
position: 2383804
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2382925-2382981:-1:exon

position:2382925:-1
position: 2382925
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2382981:-1
position: 2382981
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:2381930-2382022:-1:exon

position:2381930:-1
position: 2381930
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2382022:-1
position: 2382022
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:2381230-2381368:-1:exon

position:2381230:-1
position: 2381230
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2381368:-1
position: 2381368
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:2380622-2380749:-1:exon

position:2380622:-1
position: 2380622
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2380749:-1
position: 2380749
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:2378583-2378639:-1:exon

position:2378583:-1
position: 2378583
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2378639:-1
position: 2378639
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:2375984-2376055:-1:exon

position:2375984:-1
position: 2375984
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2376055:-1
position: 2376055
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:2375475-2375906:-1:exon

position:2375475:-1
position: 2375475
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2375906:-1
position: 2375906
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:2373135-2373319:-1:exon

position:2373319:-1
position: 2373319
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

zgc:158270
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 451745
gene: zgc:158270
product: uncharacterized protein LOC791213 homolog, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 38 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_037690047.1
SIO_010081: zgc:158270
subclass of: SO_0000673
so part of: zgc:158270
location: complement(join(2373135..2373319,2373721..2373735,2375475..2375906,2375984..2376055,2378583..2378639,2380622..2380749,2381230..2381368,2381930..2382022,2382925..2382981,2383754..2383804,2385046..2385150,2385305..2385439,2391862..2392145,2399918..2399996))
location: region:2373135-2399996:-1
so has part: feature:2399918-2399996:-1:exon
so has part: feature:2391862-2392145:-1:exon
so has part: feature:2385305-2385439:-1:exon
so has part: feature:2385046-2385150:-1:exon
so has part: feature:2383754-2383804:-1:exon
so has part: feature:2382925-2382981:-1:exon
so has part: feature:2381930-2382022:-1:exon
so has part: feature:2381230-2381368:-1:exon
so has part: feature:2380622-2380749:-1:exon
so has part: feature:2378583-2378639:-1:exon
so has part: feature:2375984-2376055:-1:exon
so has part: feature:2375475-2375906:-1:exon
so has part: feature:2373721-2373735:-1:exon
so has part: feature:2373135-2373319:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2399918-2399996:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2391862-2392145:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2385305-2385439:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2385046-2385150:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2383754-2383804:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2382925-2382981:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2381930-2382022:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2381230-2381368:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2380622-2380749:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2378583-2378639:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2375984-2376055:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2375475-2375906:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2373721-2373735:-1:exon

position:2373721:-1
position: 2373721
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2373735:-1
position: 2373735
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:2373135-2373319:-1:exon

zgc:158270
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 451745
gene: zgc:158270
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: atlastin-2 isoform X2
translation: MAAEESRLKQRYHKNSIFREGGHAFKSETSRLRYKVEEDDQQDEEEEEVFVARPVQIVEANEEEHSFSLQEAALEQLLLQKEVQDLNVVVVSVAGAFRKGKSFLLDFMLRYMYRKSPDSWIGGEEEPLTGFTWRGGCERETTGILAWSDVFVVEKPDGNKVAVLLVDTQGAFDSQSTIKDCATLFALSTMTSSVQVYNLSQNVQEDDLQHLQLFTEYGRLAMEEVYEKPFQTLMFLIRDWSYPYEHQYGLEGGLSFLEKRLQVKQNQHEELQNVRKHIHSCFSNISCFLLPHPGLRVATNPHFDGRLTDIDEEFKMQLVNLVPTLLSPDNLVEKEIGGVKITCRDLLHYFKAYMKIYQGEELPHPKSMLQATAEANNLAAVAGAKDMYNKNMEQICGGDKPYISPAELERRHTELRQSSVRHFRSVKKMGGEDFCKRYQDQLEMELDEAYANFSKHNDGKNIFYAARTPATLFAVMFIMYIVSLVTGFVGICSVAMLCNLMMGVALTALCVWAYVKYSGEFREVGGVIDKVAEILWEQIFSKLFEVARSRVPLGSLIPARRPRLASNNNIKKNI
SIO_010081: zgc:158270
subclass of: SO_0000673
so part of: zgc:158270
location: complement(join(2373209..2373319,2375475..2375906,2375984..2376055,2378583..2378639,2380622..2380749,2381230..2381368,2381930..2382022,2382925..2382981,2383754..2383804,2385046..2385150,2385305..2385439,2391862..2392145,2399918..2399978))
location: region:2373209-2399978:-1
so has part: feature:2399918-2399978:-1:exon
so has part: feature:2391862-2392145:-1:exon
so has part: feature:2385305-2385439:-1:exon
so has part: feature:2385046-2385150:-1:exon
so has part: feature:2383754-2383804:-1:exon
so has part: feature:2382925-2382981:-1:exon
so has part: feature:2381930-2382022:-1:exon
so has part: feature:2381230-2381368:-1:exon
so has part: feature:2380622-2380749:-1:exon
so has part: feature:2378583-2378639:-1:exon
so has part: feature:2375984-2376055:-1:exon
so has part: feature:2375475-2375906:-1:exon
so has part: feature:2373209-2373319:-1:exon

XP_037545976.1
type: Protein
SIO_000068: ncbiprotein

position:2373209:-1
position: 2373209
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2399978:-1
position: 2399978
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2399918-2399978:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2391862-2392145:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2385305-2385439:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2385046-2385150:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2383754-2383804:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2382925-2382981:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2381930-2382022:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2381230-2381368:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2380622-2380749:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2378583-2378639:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2375984-2376055:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2375475-2375906:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2373209-2373319:-1:exon

zgc:158270
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 451745
gene: zgc:158270
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: atlastin-2 isoform X1
translation: MAAEESRLKQRYHKNSIFREGGHAFKSETSRLRYKVEEDDQQDEEEEEVFVARPVQIVEANEEEHSFSLQEAALEQLLLQKEVQDLNVVVVSVAGAFRKGKSFLLDFMLRYMYRKSPDSWIGGEEEPLTGFTWRGGCERETTGILAWSDVFVVEKPDGNKVAVLLVDTQGAFDSQSTIKDCATLFALSTMTSSVQVYNLSQNVQEDDLQHLQLFTEYGRLAMEEVYEKPFQTLMFLIRDWSYPYEHQYGLEGGLSFLEKRLQVKQNQHEELQNVRKHIHSCFSNISCFLLPHPGLRVATNPHFDGRLTDIDEEFKMQLVNLVPTLLSPDNLVEKEIGGVKITCRDLLHYFKAYMKIYQGEELPHPKSMLQATAEANNLAAVAGAKDMYNKNMEQICGGDKPYISPAELERRHTELRQSSVRHFRSVKKMGGEDFCKRYQDQLEMELDEAYANFSKHNDGKNIFYAARTPATLFAVMFIMYIVSLVTGFVGICSVAMLCNLMMGVALTALCVWAYVKYSGEFREVGGVIDKVAEILWEQRTPRKIFSKLFEVARSRVPLGSLIPARRPRLASNNNIKKNI
SIO_010081: zgc:158270
subclass of: SO_0000673
so part of: zgc:158270
location: complement(join(2373209..2373319,2373721..2373735,2375475..2375906,2375984..2376055,2378583..2378639,2380622..2380749,2381230..2381368,2381930..2382022,2382925..2382981,2383754..2383804,2385046..2385150,2385305..2385439,2391862..2392145,2399918..2399978))
location: region:2373209-2399978:-1
so has part: feature:2399918-2399978:-1:exon
so has part: feature:2391862-2392145:-1:exon
so has part: feature:2385305-2385439:-1:exon
so has part: feature:2385046-2385150:-1:exon
so has part: feature:2383754-2383804:-1:exon
so has part: feature:2382925-2382981:-1:exon
so has part: feature:2381930-2382022:-1:exon
so has part: feature:2381230-2381368:-1:exon
so has part: feature:2380622-2380749:-1:exon
so has part: feature:2378583-2378639:-1:exon
so has part: feature:2375984-2376055:-1:exon
so has part: feature:2375475-2375906:-1:exon
so has part: feature:2373721-2373735:-1:exon
so has part: feature:2373209-2373319:-1:exon

XP_037545975.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2399918-2399978:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2391862-2392145:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2385305-2385439:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2385046-2385150:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2383754-2383804:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2382925-2382981:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2381930-2382022:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2381230-2381368:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2380622-2380749:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2378583-2378639:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2375984-2376055:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2375475-2375906:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2373721-2373735:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2373209-2373319:-1:exon

LOC119422663
type: Gene
subclass of: SO_0000704
RO_0002162: 451745
gene: LOC119422663
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2406173..2420724)
location: region:2406173-2420724:-1
so has part: feature:2406173-2420724:-1:exon
subclass of: SO_0000010

119422663
type: Gene
SIO_000068: ncbigene

position:2406173:-1
position: 2406173
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2420724:-1
position: 2420724
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2406173-2420724:-1:exon

LOC119422663
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 451745
gene: LOC119422663
product: heterogeneous nuclear ribonucleoprotein L-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 16 Proteins, and 93% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_037690049.1
SIO_010081: LOC119422663
subclass of: SO_0000673
so part of: LOC119422663
location: complement(join(2406173..2406494,2408123..2408221,2408302..2408359,2408510..2408708,2409617..2409738,2410826..2411061,2411187..2411246,2413943..2414015,2414157..2414253,2414636..2414721,2417638..2417875,2420612..2420724))
location: region:2406173-2420724:-1
so has part: feature:2420612-2420724:-1:exon
so has part: feature:2417638-2417875:-1:exon
so has part: feature:2414636-2414721:-1:exon
so has part: feature:2414157-2414253:-1:exon
so has part: feature:2413943-2414015:-1:exon
so has part: feature:2411187-2411246:-1:exon
so has part: feature:2410826-2411061:-1:exon
so has part: feature:2409617-2409738:-1:exon
so has part: feature:2408510-2408708:-1:exon
so has part: feature:2408302-2408359:-1:exon
so has part: feature:2408123-2408221:-1:exon
so has part: feature:2406173-2406494:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2420612-2420724:-1:exon

position:2420612:-1
position: 2420612
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2417638-2417875:-1:exon

position:2417638:-1
position: 2417638
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2417875:-1
position: 2417875
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2414636-2414721:-1:exon

position:2414636:-1
position: 2414636
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2414721:-1
position: 2414721
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2414157-2414253:-1:exon

position:2414157:-1
position: 2414157
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2414253:-1
position: 2414253
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2413943-2414015:-1:exon

position:2413943:-1
position: 2413943
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2414015:-1
position: 2414015
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2411187-2411246:-1:exon

position:2411187:-1
position: 2411187
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2411246:-1
position: 2411246
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:2410826-2411061:-1:exon

position:2410826:-1
position: 2410826
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2411061:-1
position: 2411061
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:2409617-2409738:-1:exon

position:2409617:-1
position: 2409617
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2409738:-1
position: 2409738
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:2408510-2408708:-1:exon

position:2408510:-1
position: 2408510
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2408708:-1
position: 2408708
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:2408302-2408359:-1:exon

position:2408302:-1
position: 2408302
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2408359:-1
position: 2408359
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:2408123-2408221:-1:exon

position:2408123:-1
position: 2408123
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2408221:-1
position: 2408221
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:2406173-2406494:-1:exon

position:2406494:-1
position: 2406494
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC119422663
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 451745
gene: LOC119422663
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: heterogeneous nuclear ribonucleoprotein L-like
translation: MMMPFKRQALVEFDSVENAERCVTCGASEAVYIADQQAFFNFSTSQRITRPTNADDPTSRNKVLLLSVQNPLYPITTDVLYSVCNPVGSVQRIVIFKRNGIQAMVEFESVEGAQKAKLALNGADIYSGCCTLKIEYARPNRLNVVRNDTSSWDYTKPFLLHRDRGKGRHRQAILGEHPSNDYGPHCPLLPLPANSRYRRSHEPVQEMISYPPLLPKAFSSAQSSSSILGSSSVAMVSSLHPAKMNCSRIFNLFCLYGNVEKVKFMKSVPGTALVEMGDEYAVDRAVTHLNSIKVFGKKLNVCVSKQQAVIPSQVFELADGSSSYQDFSLTRNNRFSSTHSNRNIIQPPAAVLHFYNAPPTLSQHQLLKLCSEHNVPPFTKFKVFDAKPSLKTLSGLLEFDSKTEAVEALTVLNHHQIRIPSSSNPFTLKLCFSTSSHL
SIO_010081: LOC119422663
subclass of: SO_0000673
so part of: LOC119422663
location: complement(join(2406439..2406494,2408123..2408221,2408302..2408359,2408510..2408708,2409617..2409738,2410826..2411061,2411187..2411246,2413943..2414015,2414157..2414253,2414636..2414721,2417638..2417868))
location: region:2406439-2417868:-1
so has part: feature:2417638-2417868:-1:exon
so has part: feature:2414636-2414721:-1:exon
so has part: feature:2414157-2414253:-1:exon
so has part: feature:2413943-2414015:-1:exon
so has part: feature:2411187-2411246:-1:exon
so has part: feature:2410826-2411061:-1:exon
so has part: feature:2409617-2409738:-1:exon
so has part: feature:2408510-2408708:-1:exon
so has part: feature:2408302-2408359:-1:exon
so has part: feature:2408123-2408221:-1:exon
so has part: feature:2406439-2406494:-1:exon

XP_037545977.1
type: Protein
SIO_000068: ncbiprotein

position:2406439:-1
position: 2406439
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2417868:-1
position: 2417868
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2417638-2417868:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2414636-2414721:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2414157-2414253:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2413943-2414015:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2411187-2411246:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2410826-2411061:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2409617-2409738:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2408510-2408708:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2408302-2408359:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2408123-2408221:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2406439-2406494:-1:exon

LOC119423015
type: Gene
subclass of: SO_0000704
RO_0002162: 451745
gene: LOC119423015
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2442279..2477944)
location: region:2442279-2477944:-1
so has part: feature:2442279-2477944:-1:exon
subclass of: SO_0000010

119423015
type: Gene
SIO_000068: ncbigene

position:2442279:-1
position: 2442279
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2477944:-1
position: 2477944
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2442279-2477944:-1:exon

LOC119423015
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 451745
gene: LOC119423015
product: solute carrier family 22 member 7-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 Proteins
transcript id: XM_037690427.1
SIO_010081: LOC119423015
subclass of: SO_0000673
so part of: LOC119423015
location: complement(join(2442279..2442322,2443412..2443644,2445529..2445637,2445787..2446001,2446079..2446188,2453564..2453687,2453771..2453939,2457458..2457629,2477882..2477944))
location: region:2442279-2477944:-1
so has part: feature:2477882-2477944:-1:exon
so has part: feature:2457458-2457629:-1:exon
so has part: feature:2453771-2453939:-1:exon
so has part: feature:2453564-2453687:-1:exon
so has part: feature:2446079-2446188:-1:exon
so has part: feature:2445787-2446001:-1:exon
so has part: feature:2445529-2445637:-1:exon
so has part: feature:2443412-2443644:-1:exon
so has part: feature:2442279-2442322:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2477882-2477944:-1:exon

position:2477882:-1
position: 2477882
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2457458-2457629:-1:exon

position:2457458:-1
position: 2457458
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2457629:-1
position: 2457629
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2453771-2453939:-1:exon

position:2453771:-1
position: 2453771
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2453939:-1
position: 2453939
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2453564-2453687:-1:exon

position:2453564:-1
position: 2453564
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2453687:-1
position: 2453687
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2446079-2446188:-1:exon

position:2446079:-1
position: 2446079
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2446188:-1
position: 2446188
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2445787-2446001:-1:exon

position:2445787:-1
position: 2445787
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2446001:-1
position: 2446001
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:2445529-2445637:-1:exon

position:2445529:-1
position: 2445529
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2445637:-1
position: 2445637
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:2443412-2443644:-1:exon

position:2443412:-1
position: 2443412
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2443644:-1
position: 2443644
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:2442279-2442322:-1:exon

position:2442322:-1
position: 2442322
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC119423015
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 451745
gene: LOC119423015
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: solute carrier family 22 member 7-like
translation: MVLVLVMVLVQVMVMVIVLVMVCVCCRFGRRSMLLVALIATTVMGATSALSTSYTMFAISRVLSGVALSGLSIIVAVLGIEWTDVKHRTFTGTIMSLSWTVGNMFLALLAFLIRDWRHLTMAATAPCIVALISWWWLPESARWLLAHGRTEEAQKYLTQCAKINRRDTCTSKLDTEVLRTITVSEVAEKNHTYLDLIKSPQLRKITLCSGFFWFAVSFLYYGISFKISGFGVNIYLTQFIYGAIEAPAKILTFFVLDRIGRRHCQAWFLITTGALIGINAAIPLEYSVIRTCVGVVAKGFSEAAFTTAFLYTAELYPTVLRQCGLGYTSCLARTGSSLAPMIMMLEDTWLLLPPVVFAGTGIVSGSLVFLLPETLNVHLPENIFDVEKKRYKRRGDLTCKWRVMQKERHKLS
SIO_010081: LOC119423015
subclass of: SO_0000673
so part of: LOC119423015
location: complement(join(2442279..2442322,2443412..2443644,2445529..2445637,2445787..2446001,2446079..2446188,2453564..2453687,2453771..2453939,2457458..2457629,2477882..2477944))
location: region:2442279-2477944:-1
so has part: feature:2477882-2477944:-1:exon
so has part: feature:2457458-2457629:-1:exon
so has part: feature:2453771-2453939:-1:exon
so has part: feature:2453564-2453687:-1:exon
so has part: feature:2446079-2446188:-1:exon
so has part: feature:2445787-2446001:-1:exon
so has part: feature:2445529-2445637:-1:exon
so has part: feature:2443412-2443644:-1:exon
so has part: feature:2442279-2442322:-1:exon

XP_037546355.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2477882-2477944:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2457458-2457629:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2453771-2453939:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2453564-2453687:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2446079-2446188:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2445787-2446001:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2445529-2445637:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2443412-2443644:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2442279-2442322:-1:exon

ero1b
type: Gene
subclass of: SO_0000704
RO_0002162: 451745
gene: ero1b
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2478342..2492552
location: region:2478342-2492552:1
so has part: feature:2478342-2492552:1:exon
subclass of: SO_0000010

119423016
type: Gene
SIO_000068: ncbigene

position:2478342:1
position: 2478342
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2492552:1
position: 2492552
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2478342-2492552:1:exon

ero1b
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 451745
gene: ero1b
product: endoplasmic reticulum oxidoreductase 1 beta
inference: similar to RNA sequence (same species):INSD:GELZ01010452.1
exception: annotated by transcript or proteomic data
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: added 153 bases not found in genome assembly; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 15 Proteins, and 96% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_037690428.1
SIO_010081: ero1b
subclass of: SO_0000673
so part of: ero1b
location: join(2478342..2478494,2479408..2479491,2479719..2479760,2480920..2481002,2481937..2482010,2482815..2482935,2483451..2483497,2483861..2483872,2483968..2483994,2484240..2484332,2485667..2485913,2488003..2488072,2490508..>2490575,2491227..2492552)
location: region:2478342-2492552:1
so has part: feature:2478342-2478494:1:exon
so has part: feature:2479408-2479491:1:exon
so has part: feature:2479719-2479760:1:exon
so has part: feature:2480920-2481002:1:exon
so has part: feature:2481937-2482010:1:exon
so has part: feature:2482815-2482935:1:exon
so has part: feature:2483451-2483497:1:exon
so has part: feature:2483861-2483872:1:exon
so has part: feature:2483968-2483994:1:exon
so has part: feature:2484240-2484332:1:exon
so has part: feature:2485667-2485913:1:exon
so has part: feature:2488003-2488072:1:exon
so has part: feature:2490508-2490575:1:exon
so has part: feature:2491227-2492552:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2478342-2478494:1:exon

position:2478494:1
position: 2478494
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2479408-2479491:1:exon

position:2479408:1
position: 2479408
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2479491:1
position: 2479491
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2479719-2479760:1:exon

position:2479719:1
position: 2479719
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2479760:1
position: 2479760
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2480920-2481002:1:exon

position:2480920:1
position: 2480920
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2481002:1
position: 2481002
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2481937-2482010:1:exon

position:2481937:1
position: 2481937
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2482010:1
position: 2482010
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2482815-2482935:1:exon

position:2482815:1
position: 2482815
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2482935:1
position: 2482935
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:2483451-2483497:1:exon

position:2483451:1
position: 2483451
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2483497:1
position: 2483497
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:2483861-2483872:1:exon

position:2483861:1
position: 2483861
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2483872:1
position: 2483872
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:2483968-2483994:1:exon

position:2483968:1
position: 2483968
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2483994:1
position: 2483994
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:2484240-2484332:1:exon

position:2484240:1
position: 2484240
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2484332:1
position: 2484332
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:2485667-2485913:1:exon

position:2485667:1
position: 2485667
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2485913:1
position: 2485913
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:2488003-2488072:1:exon

position:2488003:1
position: 2488003
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2488072:1
position: 2488072
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:2490508-2490575:1:exon

position:2490508:1
position: 2490508
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2490575:1
position: 2490575
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 14
SIO_000628: feature:2491227-2492552:1:exon

position:2491227:1
position: 2491227
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

ero1b
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 451745
gene: ero1b
inference: similar to RNA sequence (same species):INSD:GELZ01010452.1
exception: annotated by transcript or proteomic data
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: added 153 bases not found in genome assembly; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ERO1-like protein beta
translation: MESQRVCARFQLTGVLDDCFCDVESIDVFNNFKIYPRMKKLTERDYFRYYRVNLKRPCPFWPDDGHCSIKDCHVEPCPESQVPVGIKSGNYNKFSQASSSVSDVSECEQAKELGAINSTLSNRSKVAFADWARHDDAQDHFCELDDETSPDAEYVDLLLNPERFTGYKGPSAWRVWNSIYEENCFKPRSVYRPLNPLAPSRGDDDGEGFYKWLEGLCLEKRVFYRLISGLHSSINIHLCAEYLLDEGWSHTVWGPNIHEFRQRFDTAETKGEGTRRLKNLYFLYLIELRALYKVAPYFERAIVSLYTGNSPEDGETKDLLLQIFNEIKAFPMHFDEKSMFAGHKLEAKTLKEEFRLHFKNISRIMDCVGCSKCRLWGKLQTQGLGTALKILFSEKEIQNLPEHSPSKGFQLTRQEIVAFINAFGRLSTSIYQLHNFRQMLQEQR
SIO_010081: ero1b
subclass of: SO_0000673
so part of: ero1b
location: join(2478342..2478494,2479408..2479491,2479719..2479760,2480920..2481002,2481937..2482010,2482815..2482935,2483451..2483497,2483861..2483872,2483968..2483994,2484240..2484332,2485667..2485913,2488003..2488072,2490508..>2490575,2491227..2491287)
location: region:2478342-2491287:1
so has part: feature:2478342-2478494:1:exon
so has part: feature:2479408-2479491:1:exon
so has part: feature:2479719-2479760:1:exon
so has part: feature:2480920-2481002:1:exon
so has part: feature:2481937-2482010:1:exon
so has part: feature:2482815-2482935:1:exon
so has part: feature:2483451-2483497:1:exon
so has part: feature:2483861-2483872:1:exon
so has part: feature:2483968-2483994:1:exon
so has part: feature:2484240-2484332:1:exon
so has part: feature:2485667-2485913:1:exon
so has part: feature:2488003-2488072:1:exon
so has part: feature:2490508-2490575:1:exon
so has part: feature:2491227-2491287:1:exon

XP_037546356.1
type: Protein
SIO_000068: ncbiprotein

position:2491287:1
position: 2491287
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2478342-2478494:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2479408-2479491:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2479719-2479760:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2480920-2481002:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2481937-2482010:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2482815-2482935:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2483451-2483497:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2483861-2483872:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2483968-2483994:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2484240-2484332:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2485667-2485913:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2488003-2488072:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2490508-2490575:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2491227-2491287:1:exon

irf2bp2b
type: Gene
subclass of: SO_0000704
RO_0002162: 451745
gene: irf2bp2b
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2529268..>2530056
location: region:2529268-2530056:1
so has part: feature:2529268-2530056:1:exon
subclass of: SO_0000010

119423249
type: Gene
SIO_000068: ncbigene

position:2529268:1
position: 2529268
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2530056:1
position: 2530056
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2529268-2530056:1:exon

irf2bp2b
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 451745
gene: irf2bp2b
product: interferon regulatory factor 2 binding protein 2b
inference: similar to RNA sequence (same species):INSD:GELZ01031689.1
exception: annotated by transcript or proteomic data
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: added 361 bases not found in genome assembly; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_037690666.1
SIO_010081: irf2bp2b
subclass of: SO_0000673
so part of: irf2bp2b
location: 2529268..>2530056
location: region:2529268-2530056:1
so has part: feature:2529268-2530056:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2529268-2530056:1:exon

irf2bp2b
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 451745
gene: irf2bp2b
inference: similar to RNA sequence (same species):INSD:GELZ01031689.1
exception: annotated by transcript or proteomic data
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: added 361 bases not found in genome assembly; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: interferon regulatory factor 2-binding protein 2-B
translation: MSSAAASRRQSCYLCDLPRMPWAMIWDFTEPVCRGCVNYEGADRIEFVIETARQLKRVHGFQEGRSLGPGKHHAVKLLHHSPGDSSSRPSLDRYPLSERPPRLGLEYQAGRQVNGLPVPNDPPELNRHSPNHRRTSSVSPSLGPVVTGRPGPVGLPGAQAGPVLGELHGSKHRPDSLSDLPDNKDWMSRGRTVRDLMALQAFDGRFKKEAMMQRVLGSEPSPASTRTDRGKTTRSVKRKASPEPDGDGSAPKLNGCEGQQWLPSPSELLKIPPSSLPGFSGALQSNMSLYTHTTASESATAHNGQSPVAVLMDTTDNTSSAGSPKDQVHSTMASGRRGSPVSPSAPRS
SIO_010081: irf2bp2b
subclass of: SO_0000673
so part of: irf2bp2b
location: 2529375..>2530056
location: region:2529375-2530056:1
so has part: feature:2529375-2530056:1:exon

XP_037546594.1
type: Protein
SIO_000068: ncbiprotein

position:2529375:1
position: 2529375
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2529375-2530056:1:exon

tbce
type: Gene
subclass of: SO_0000704
RO_0002162: 451745
gene: tbce
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2531519..2540102)
location: region:2531519-2540102:-1
so has part: feature:2531519-2540102:-1:exon
subclass of: SO_0000010

119423018
type: Gene
SIO_000068: ncbigene

position:2531519:-1
position: 2531519
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2540102:-1
position: 2540102
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2531519-2540102:-1:exon

tbce
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 451745
gene: tbce
product: tubulin folding cofactor E
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 67% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_037690430.1
SIO_010081: tbce
subclass of: SO_0000673
so part of: tbce
location: complement(join(2531519..2531610,2532959..2533023,2534197..2534292,2534396..2534472,2535221..2535323,2535400..2535499,2537869..2537954,2538515..2538679,2538845..2538929,2539808..2540102))
location: region:2531519-2540102:-1
so has part: feature:2539808-2540102:-1:exon
so has part: feature:2538845-2538929:-1:exon
so has part: feature:2538515-2538679:-1:exon
so has part: feature:2537869-2537954:-1:exon
so has part: feature:2535400-2535499:-1:exon
so has part: feature:2535221-2535323:-1:exon
so has part: feature:2534396-2534472:-1:exon
so has part: feature:2534197-2534292:-1:exon
so has part: feature:2532959-2533023:-1:exon
so has part: feature:2531519-2531610:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2539808-2540102:-1:exon

position:2539808:-1
position: 2539808
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2538845-2538929:-1:exon

position:2538845:-1
position: 2538845
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2538929:-1
position: 2538929
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2538515-2538679:-1:exon

position:2538515:-1
position: 2538515
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2538679:-1
position: 2538679
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2537869-2537954:-1:exon

position:2537869:-1
position: 2537869
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2537954:-1
position: 2537954
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2535400-2535499:-1:exon

position:2535400:-1
position: 2535400
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2535499:-1
position: 2535499
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2535221-2535323:-1:exon

position:2535221:-1
position: 2535221
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2535323:-1
position: 2535323
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:2534396-2534472:-1:exon

position:2534396:-1
position: 2534396
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2534472:-1
position: 2534472
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:2534197-2534292:-1:exon

position:2534197:-1
position: 2534197
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2534292:-1
position: 2534292
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:2532959-2533023:-1:exon

position:2532959:-1
position: 2532959
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2533023:-1
position: 2533023
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:2531519-2531610:-1:exon

position:2531610:-1
position: 2531610
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

tbce
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 451745
gene: tbce
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tubulin-specific chaperone E
translation: MGTEYTEPELPADPVGRRVSCGGERATVRYVGPVPPTPGLWLGVEWDNAERGKHDGSHGGVQYFTCRHPKGGSFVRPAKASFGVDFLTALQRTYEFNTEEVLSEEITVSSKKLEWLAVEARRFESLPAVMLNCQEVNGPGAPGEIRKTTPNVRWLDLSGSLLSSWEEVSSITEQLEKLEGLQLSNNRLRLPSDPSAHCQAFSNLTVLALNSCMLTWLQVLECAVMWPQLENLSLENNNITELHRPEGGVLQTLKYLSLSCNPLVQDSILSLSALPRLEELNVSNTKLSAIRFEDAAPGCYTAMFPSLKVLNVDQNNISEVSESPHSG
SIO_010081: tbce
subclass of: SO_0000673
so part of: tbce
location: complement(join(2531519..2531610,2532959..2533023,2534197..2534292,2534396..2534472,2535221..2535323,2535400..2535499,2537869..2537954,2538515..2538679,2538845..2538929,2539808..2539922))
location: region:2531519-2539922:-1
so has part: feature:2539808-2539922:-1:exon
so has part: feature:2538845-2538929:-1:exon
so has part: feature:2538515-2538679:-1:exon
so has part: feature:2537869-2537954:-1:exon
so has part: feature:2535400-2535499:-1:exon
so has part: feature:2535221-2535323:-1:exon
so has part: feature:2534396-2534472:-1:exon
so has part: feature:2534197-2534292:-1:exon
so has part: feature:2532959-2533023:-1:exon
so has part: feature:2531519-2531610:-1:exon

XP_037546358.1
type: Protein
SIO_000068: ncbiprotein

position:2539922:-1
position: 2539922
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2539808-2539922:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2538845-2538929:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2538515-2538679:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2537869-2537954:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2535400-2535499:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2535221-2535323:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2534396-2534472:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2534197-2534292:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2532959-2533023:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2531519-2531610:-1:exon

rbm34
type: Gene
subclass of: SO_0000704
RO_0002162: 451745
gene: rbm34
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2540328..2552119
location: region:2540328-2552119:1
so has part: feature:2540328-2552119:1:exon
subclass of: SO_0000010

119422664
type: Gene
SIO_000068: ncbigene

position:2540328:1
position: 2540328
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2552119:1
position: 2552119
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2540328-2552119:1:exon

rbm34
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 451745
gene: rbm34
product: RNA binding motif protein 34
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_037690051.1
SIO_010081: rbm34
subclass of: SO_0000673
so part of: rbm34
location: join(2540328..2540524,2542168..2542339,2544381..2544505,2544592..2544805,2546088..2546147,2546253..2546296,2547535..2547618,2549265..2549328,2549403..2549445,2549523..2549641,2551825..2552119)
location: region:2540328-2552119:1
so has part: feature:2540328-2540524:1:exon
so has part: feature:2542168-2542339:1:exon
so has part: feature:2544381-2544505:1:exon
so has part: feature:2544592-2544805:1:exon
so has part: feature:2546088-2546147:1:exon
so has part: feature:2546253-2546296:1:exon
so has part: feature:2547535-2547618:1:exon
so has part: feature:2549265-2549328:1:exon
so has part: feature:2549403-2549445:1:exon
so has part: feature:2549523-2549641:1:exon
so has part: feature:2551825-2552119:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2540328-2540524:1:exon

position:2540524:1
position: 2540524
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2542168-2542339:1:exon

position:2542168:1
position: 2542168
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2542339:1
position: 2542339
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2544381-2544505:1:exon

position:2544381:1
position: 2544381
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2544505:1
position: 2544505
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2544592-2544805:1:exon

position:2544592:1
position: 2544592
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2544805:1
position: 2544805
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2546088-2546147:1:exon

position:2546088:1
position: 2546088
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2546147:1
position: 2546147
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2546253-2546296:1:exon

position:2546253:1
position: 2546253
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2546296:1
position: 2546296
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:2547535-2547618:1:exon

position:2547535:1
position: 2547535
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2547618:1
position: 2547618
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:2549265-2549328:1:exon

position:2549265:1
position: 2549265
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2549328:1
position: 2549328
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:2549403-2549445:1:exon

position:2549403:1
position: 2549403
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2549445:1
position: 2549445
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:2549523-2549641:1:exon

position:2549523:1
position: 2549523
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2549641:1
position: 2549641
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:2551825-2552119:1:exon

position:2551825:1
position: 2551825
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

rbm34
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 451745
gene: rbm34
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: RNA-binding protein 34
translation: MKKKKVQHSVSVTSGESSAGQQSADYTVGQVSGSLSQQNSGASGSLSALFRTSTQAAPVLFQPAPKKVTTKEDKQERSCEVKEEQSPKKKKKKLLRTTSAADQKLQSRESSLQNADDEESGQQSAAAKRKRRDSRADRENDVEYWVMRRQQQKTRKQEEAFKSKRTVFVGNLPLSCTEKTLRRLFKHEGAIESVRFRSVVREDPCMSRKVAVIKRKAHPQKQSLNAYVLFQSEDAVAKALERNGLEMEPDFHIRVDRVADSCSHDHKRSVFLGNLPFEIKELEIRKHFEMCGPVEAVRLVRDKNSGLGKGFGYVLFEHVDSVQLALELDDSKLQGRSIRVKRSVKKEKQERRAGSXRNLNENQQNLQKTSRTRERSWSRRLEVLKKVW
SIO_010081: rbm34
subclass of: SO_0000673
so part of: rbm34
location: join(2540499..2540524,2542168..2542339,2544381..2544505,2544592..2544805,2546088..2546147,2546253..2546296,2547535..2547618,2549265..2549328,2549403..2549445,2549523..2549641,2551825..2552039)
location: region:2540499-2552039:1
so has part: feature:2540499-2540524:1:exon
so has part: feature:2542168-2542339:1:exon
so has part: feature:2544381-2544505:1:exon
so has part: feature:2544592-2544805:1:exon
so has part: feature:2546088-2546147:1:exon
so has part: feature:2546253-2546296:1:exon
so has part: feature:2547535-2547618:1:exon
so has part: feature:2549265-2549328:1:exon
so has part: feature:2549403-2549445:1:exon
so has part: feature:2549523-2549641:1:exon
so has part: feature:2551825-2552039:1:exon

XP_037545979.1
type: Protein
SIO_000068: ncbiprotein

position:2540499:1
position: 2540499
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2552039:1
position: 2552039
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2540499-2540524:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2542168-2542339:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2544381-2544505:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2544592-2544805:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2546088-2546147:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2546253-2546296:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2547535-2547618:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2549265-2549328:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2549403-2549445:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2549523-2549641:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2551825-2552039:1:exon

tomm20b
type: Gene
subclass of: SO_0000704
RO_0002162: 451745
gene: tomm20b
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2553520..2559021)
location: region:2553520-2559021:-1
so has part: feature:2553520-2559021:-1:exon
subclass of: SO_0000010

119422665
type: Gene
SIO_000068: ncbigene

position:2553520:-1
position: 2553520
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2559021:-1
position: 2559021
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2553520-2559021:-1:exon

tomm20b
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 451745
gene: tomm20b
product: translocase of outer mitochondrial membrane 20b
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 24 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_037690052.1
SIO_010081: tomm20b
subclass of: SO_0000673
so part of: tomm20b
location: complement(join(2553520..2554088,2554167..2554309,2556440..2556521,2556983..2557029,2558772..2559021))
location: region:2553520-2559021:-1
so has part: feature:2558772-2559021:-1:exon
so has part: feature:2556983-2557029:-1:exon
so has part: feature:2556440-2556521:-1:exon
so has part: feature:2554167-2554309:-1:exon
so has part: feature:2553520-2554088:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2558772-2559021:-1:exon

position:2558772:-1
position: 2558772
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2556983-2557029:-1:exon

position:2556983:-1
position: 2556983
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2557029:-1
position: 2557029
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2556440-2556521:-1:exon

position:2556440:-1
position: 2556440
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2556521:-1
position: 2556521
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2554167-2554309:-1:exon

position:2554167:-1
position: 2554167
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2554309:-1
position: 2554309
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2553520-2554088:-1:exon

position:2554088:-1
position: 2554088
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

tomm20b
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 451745
gene: tomm20b
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: mitochondrial import receptor subunit TOM20 homolog B
translation: MGGRTSAIAAGLCGALLIGYCIYFDRKRRNDPNFKNRLRERRRKQKVAQDKAGLAKLPDLKDAEAVQKFFLEEIQLGEELLAQGDYEKGVDHLTNAIAVCGQPQQLLQVLQQTLPAPVFQMLLTKLPTISQRIVSAQSASEDDLE
SIO_010081: tomm20b
subclass of: SO_0000673
so part of: tomm20b
location: complement(join(2554044..2554088,2554167..2554309,2556440..2556521,2556983..2557029,2558772..2558892))
location: region:2554044-2558892:-1
so has part: feature:2558772-2558892:-1:exon
so has part: feature:2556983-2557029:-1:exon
so has part: feature:2556440-2556521:-1:exon
so has part: feature:2554167-2554309:-1:exon
so has part: feature:2554044-2554088:-1:exon

XP_037545980.1
type: Protein
SIO_000068: ncbiprotein

position:2554044:-1
position: 2554044
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2558892:-1
position: 2558892
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2558772-2558892:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2556983-2557029:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2556440-2556521:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2554167-2554309:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2554044-2554088:-1:exon

LOC119423019
type: Gene
subclass of: SO_0000704
RO_0002162: 451745
gene: LOC119423019
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2589842..2615747)
location: region:2589842-2615747:-1
so has part: feature:2589842-2615747:-1:exon
subclass of: SO_0000010

119423019
type: Gene
SIO_000068: ncbigene

position:2589842:-1
position: 2589842
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2615747:-1
position: 2615747
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2589842-2615747:-1:exon

LOC119423019
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 451745
gene: LOC119423019
product: P2X purinoceptor 3-like
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: deleted 2 bases in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 67% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_037690431.1
SIO_010081: LOC119423019
subclass of: SO_0000673
so part of: LOC119423019
location: complement(join(2589842..2590174,2592044..2592121,2595922..2595987,2597179..2597272,2599942..2600138,2600405..2600456,2611776..2611845,2613278..2613349,2613429..2613564,2615626..2615747))
location: region:2589842-2615747:-1
so has part: feature:2615626-2615747:-1:exon
so has part: feature:2613429-2613564:-1:exon
so has part: feature:2613278-2613349:-1:exon
so has part: feature:2611776-2611845:-1:exon
so has part: feature:2600405-2600456:-1:exon
so has part: feature:2599942-2600138:-1:exon
so has part: feature:2597179-2597272:-1:exon
so has part: feature:2595922-2595987:-1:exon
so has part: feature:2592044-2592121:-1:exon
so has part: feature:2589842-2590174:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2615626-2615747:-1:exon

position:2615626:-1
position: 2615626
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2613429-2613564:-1:exon

position:2613429:-1
position: 2613429
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2613564:-1
position: 2613564
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2613278-2613349:-1:exon

position:2613278:-1
position: 2613278
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2613349:-1
position: 2613349
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2611776-2611845:-1:exon

position:2611776:-1
position: 2611776
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2611845:-1
position: 2611845
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2600405-2600456:-1:exon

position:2600405:-1
position: 2600405
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2600456:-1
position: 2600456
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2599942-2600138:-1:exon

position:2599942:-1
position: 2599942
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2600138:-1
position: 2600138
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:2597179-2597272:-1:exon

position:2597179:-1
position: 2597179
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2597272:-1
position: 2597272
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:2595922-2595987:-1:exon

position:2595922:-1
position: 2595922
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2595987:-1
position: 2595987
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:2592044-2592121:-1:exon

position:2592044:-1
position: 2592044
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2592121:-1
position: 2592121
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:2589842-2590174:-1:exon

position:2590174:-1
position: 2590174
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC119423019
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 451745
gene: LOC119423019
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: deleted 2 bases in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: P2X purinoceptor 3-like
translation: MWSCVKNFFTYETTKSVVVKSWTIGIINRIVQLIIISYFIGWVFLWEKAYQVRDTAIESSVMTKVKGFGVYNNRVMDVADYVTPTQGGSVFCIITKMITTENQVQGYCPESGKKYNCTHDSHCKRFLQKPADNVVFVLWYQYTYDYWYAYRIHDLVEFSQMYFSHIDQSQGGVIGIKISWMCDLDKSDDQCKPAYSFTRLDAMSQKTSVSPGYNFRFAKYFKMENGTDYRTLVKAFAIRFDVIVNGNAGKFNMIPTLINIVAAFTSVGVGTVLCDIILLNFLKGAEQYKAKKFEEVSDNPLDTQNNGLFHSQLSLRQSAFKSSDSGAFSIERYS
SIO_010081: LOC119423019
subclass of: SO_0000673
so part of: LOC119423019
location: complement(join(2590055..2590174,2592044..2592121,2595922..2595987,2597179..2597272,2599942..2600138,2600405..2600456,2611776..2611845,2613278..2613349,2613429..2613564,2615626..2615747))
location: region:2590055-2615747:-1
so has part: feature:2615626-2615747:-1:exon
so has part: feature:2613429-2613564:-1:exon
so has part: feature:2613278-2613349:-1:exon
so has part: feature:2611776-2611845:-1:exon
so has part: feature:2600405-2600456:-1:exon
so has part: feature:2599942-2600138:-1:exon
so has part: feature:2597179-2597272:-1:exon
so has part: feature:2595922-2595987:-1:exon
so has part: feature:2592044-2592121:-1:exon
so has part: feature:2590055-2590174:-1:exon

XP_037546359.1
type: Protein
SIO_000068: ncbiprotein

position:2590055:-1
position: 2590055
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2615626-2615747:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2613429-2613564:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2613278-2613349:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2611776-2611845:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2600405-2600456:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2599942-2600138:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2597179-2597272:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2595922-2595987:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2592044-2592121:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2590055-2590174:-1:exon

pold4
type: Gene
subclass of: SO_0000704
RO_0002162: 451745
gene: pold4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2625451..2636858
location: region:2625451-2636858:1
so has part: feature:2625451-2636858:1:exon
subclass of: SO_0000010

119422666
type: Gene
SIO_000068: ncbigene

position:2625451:1
position: 2625451
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2636858:1
position: 2636858
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2625451-2636858:1:exon

pold4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 451745
gene: pold4
product: DNA polymerase delta 4, accessory subunit
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 13 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_037690053.1
SIO_010081: pold4
subclass of: SO_0000673
so part of: pold4
location: join(2625451..2625562,2628344..2628459,2629878..2629961,2630184..2630292,2636699..2636858)
location: region:2625451-2636858:1
so has part: feature:2625451-2625562:1:exon
so has part: feature:2628344-2628459:1:exon
so has part: feature:2629878-2629961:1:exon
so has part: feature:2630184-2630292:1:exon
so has part: feature:2636699-2636858:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2625451-2625562:1:exon

position:2625562:1
position: 2625562
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2628344-2628459:1:exon

position:2628344:1
position: 2628344
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2628459:1
position: 2628459
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2629878-2629961:1:exon

position:2629878:1
position: 2629878
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2629961:1
position: 2629961
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2630184-2630292:1:exon

position:2630184:1
position: 2630184
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2630292:1
position: 2630292
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2636699-2636858:1:exon

position:2636699:1
position: 2636699
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

pold4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 451745
gene: pold4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: DNA polymerase delta subunit 4
translation: MTAKRGLITDSFNVVKKTRRGGKRTKSPTPPPCEREDEAKTVEEEELQKLKQFDLDWRFGPCSGISRLQRWERAKLHGLNPPEEIRELLQTHSDPEHSLSLWREYPF
SIO_010081: pold4
subclass of: SO_0000673
so part of: pold4
location: join(2628354..2628459,2629878..2629961,2630184..2630292,2636699..2636723)
location: region:2628354-2636723:1
so has part: feature:2628354-2628459:1:exon
so has part: feature:2629878-2629961:1:exon
so has part: feature:2630184-2630292:1:exon
so has part: feature:2636699-2636723:1:exon

XP_037545981.1
type: Protein
SIO_000068: ncbiprotein

position:2628354:1
position: 2628354
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2636723:1
position: 2636723
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2628354-2628459:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2629878-2629961:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2630184-2630292:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2636699-2636723:1:exon

LOC119422667
type: Gene
subclass of: SO_0000704
RO_0002162: 451745
gene: LOC119422667
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2641149..2654334)
location: region:2641149-2654334:-1
so has part: feature:2641149-2654334:-1:exon
subclass of: SO_0000010

119422667
type: Gene
SIO_000068: ncbigene

position:2641149:-1
position: 2641149
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2654334:-1
position: 2654334
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2641149-2654334:-1:exon

LOC119422667
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 451745
gene: LOC119422667
product: zinc finger protein RFP
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 50 Proteins, and 92% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_037690054.1
SIO_010081: LOC119422667
subclass of: SO_0000673
so part of: LOC119422667
location: complement(join(2641149..2641751,2642351..2642526,2642604..2642630,2642708..2642752,2644920..2645067,2647687..2647830,2647909..2647998,2651291..2651386,2652715..2652889,2653826..2654334))
location: region:2641149-2654334:-1
so has part: feature:2653826-2654334:-1:exon
so has part: feature:2652715-2652889:-1:exon
so has part: feature:2651291-2651386:-1:exon
so has part: feature:2647909-2647998:-1:exon
so has part: feature:2647687-2647830:-1:exon
so has part: feature:2644920-2645067:-1:exon
so has part: feature:2642708-2642752:-1:exon
so has part: feature:2642604-2642630:-1:exon
so has part: feature:2642351-2642526:-1:exon
so has part: feature:2641149-2641751:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2653826-2654334:-1:exon

position:2653826:-1
position: 2653826
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2652715-2652889:-1:exon

position:2652715:-1
position: 2652715
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2652889:-1
position: 2652889
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2651291-2651386:-1:exon

position:2651291:-1
position: 2651291
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2651386:-1
position: 2651386
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2647909-2647998:-1:exon

position:2647909:-1
position: 2647909
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2647998:-1
position: 2647998
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2647687-2647830:-1:exon

position:2647687:-1
position: 2647687
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2647830:-1
position: 2647830
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2644920-2645067:-1:exon

position:2644920:-1
position: 2644920
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2645067:-1
position: 2645067
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:2642708-2642752:-1:exon

position:2642708:-1
position: 2642708
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2642752:-1
position: 2642752
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:2642604-2642630:-1:exon

position:2642604:-1
position: 2642604
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2642630:-1
position: 2642630
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:2642351-2642526:-1:exon

position:2642351:-1
position: 2642351
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2642526:-1
position: 2642526
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:2641149-2641751:-1:exon

position:2641751:-1
position: 2641751
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC119422667
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 451745
gene: LOC119422667
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger protein RFP
translation: MALPAAFLSEDQFTCSICLEVFNNPVSTPCGHSFCQSCICSYWDGGGRGAKSYQCPLCKEAFQKRPELHINRTLKEITEQFKQMANSNLSTTEIVMGREPPNAQPYKSLSAPQRPGDMPENIFVEMVARFQQLNPAGMPRGSPMESQSFFLQTQNNGLQDPPPPYSTANSMGSPADVSSNLPPCPTHLRGLEFFCRTDNKCVCSACTETAEHRGHNIVSAKREWQIKKSQAEFTEVELKELISDRERKLEEIQSSLREIKTAAEKETDEAVCAFSKLISSVEHCQGKFLEVIETSLRAAESRAQGLIREVEEEIAALKRKSSVLNQLAQSEDYINFLQKFPTVSTPPQLKDWSGVSVSSMPISGSILRSLGQMVEQLQEETRKLTEICPPPSPAQPVPRPNPKVRRVQEYAEDITLDPSTAHPRLQISPDGKQVRCSDRHQLVADNPERFDRVVCVLAHQGFSSGRHYWEVDVAGKTDWDLGVASRSVNRRGKINVSPAHGYWFLSLRDRTDFAFRTDPSTPLTVGVRPSRIGIYVDCDKGLVSFYNVEAKLLIFSFTDSFPDTVHPFFSPCTNKSGQNEAPLTICPVAIKD
SIO_010081: LOC119422667
subclass of: SO_0000673
so part of: LOC119422667
location: complement(join(2641383..2641751,2642351..2642526,2642604..2642630,2642708..2642752,2644920..2645067,2647687..2647830,2647909..2647998,2651291..2651386,2652715..2652889,2653826..2654334))
location: region:2641383-2654334:-1
so has part: feature:2653826-2654334:-1:exon
so has part: feature:2652715-2652889:-1:exon
so has part: feature:2651291-2651386:-1:exon
so has part: feature:2647909-2647998:-1:exon
so has part: feature:2647687-2647830:-1:exon
so has part: feature:2644920-2645067:-1:exon
so has part: feature:2642708-2642752:-1:exon
so has part: feature:2642604-2642630:-1:exon
so has part: feature:2642351-2642526:-1:exon
so has part: feature:2641383-2641751:-1:exon

XP_037545982.1
type: Protein
SIO_000068: ncbiprotein

position:2641383:-1
position: 2641383
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2653826-2654334:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2652715-2652889:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2651291-2651386:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2647909-2647998:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2647687-2647830:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2644920-2645067:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2642708-2642752:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2642604-2642630:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2642351-2642526:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2641383-2641751:-1:exon

LOC119423250
type: Gene
subclass of: SO_0000704
RO_0002162: 451745
gene: LOC119423250
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2684947..>2688539)
location: region:2684947-2688539:-1
so has part: feature:2684947-2688539:-1:exon
subclass of: SO_0000010

119423250
type: Gene
SIO_000068: ncbigene

position:2684947:-1
position: 2684947
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2688539:-1
position: 2688539
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2684947-2688539:-1:exon

LOC119423250
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 451745
gene: LOC119423250
product: huntingtin
inference: similar to RNA sequence (same species):INSD:GELZ01011230.1
exception: annotated by transcript or proteomic data
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: added 453 bases not found in genome assembly; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 98% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_037690667.1
SIO_010081: LOC119423250
subclass of: SO_0000673
so part of: LOC119423250
location: complement(join(2684947..2685813,2687751..2687911,2688087..2688249,2688431..>2688539))
location: region:2684947-2688539:-1
so has part: feature:2688431-2688539:-1:exon
so has part: feature:2688087-2688249:-1:exon
so has part: feature:2687751-2687911:-1:exon
so has part: feature:2684947-2685813:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2688431-2688539:-1:exon

position:2688431:-1
position: 2688431
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2688087-2688249:-1:exon

position:2688087:-1
position: 2688087
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2688249:-1
position: 2688249
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2687751-2687911:-1:exon

position:2687751:-1
position: 2687751
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2687911:-1
position: 2687911
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2684947-2685813:-1:exon

position:2685813:-1
position: 2685813
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC119423250
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 451745
gene: LOC119423250
inference: similar to RNA sequence (same species):INSD:GELZ01011230.1
exception: annotated by transcript or proteomic data
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: added 448 bases not found in genome assembly; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 3
product: huntingtin
translation: MGALHGVLYVLECDLLDETAKQLIPAVSEYLLSNLKGIAHCVNLHNQQHVLVMCAVAFYMMENYPLDVGAEFMAGVIQVCGVMVSASEDSTPSIIYHCVLRGLERLLLSEQLSRVDGEALVKLSVDRVNMPSPHRAMAALGLMLTCMYTGKEKASPASRPAHPDPQAPDSESVIVAMERVSVLFDRIRKGLPSEARVVSRILPQFLDDFFPPQDVMNKVIGEFLSNQQPYPQFMATVVYKVFQTLHATGQSSMVRDWVLLSLSNFTQRTPVAMAMWSLSCFFVSASTSQWISALLPHVISRMGSSEVVDVNLFCLVAMDFYRHQIDEELDRRAFQSVFETVASPGSAYYQLLGCLRSIHQDASL
SIO_010081: LOC119423250
subclass of: SO_0000673
so part of: LOC119423250
location: complement(join(2685600..2685813,2687751..2687911,2688087..2688249,2688431..>2688539))
location: region:2685600-2688539:-1
so has part: feature:2688431-2688539:-1:exon
so has part: feature:2688087-2688249:-1:exon
so has part: feature:2687751-2687911:-1:exon
so has part: feature:2685600-2685813:-1:exon

XP_037546595.1
type: Protein
SIO_000068: ncbiprotein

position:2685600:-1
position: 2685600
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2688431-2688539:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2688087-2688249:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2687751-2687911:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2685600-2685813:-1:exon

si:ch211-89o9.4
type: Gene
subclass of: SO_0000704
RO_0002162: 451745
gene: si:ch211-89o9.4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2699099..2753991)
location: region:2699099-2753991:-1
so has part: feature:2699099-2753991:-1:exon
subclass of: SO_0000010

119423021
type: Gene
SIO_000068: ncbigene

position:2699099:-1
position: 2699099
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2753991:-1
position: 2753991
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2699099-2753991:-1:exon

si:ch211-89o9.4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 451745
gene: si:ch211-89o9.4
product: uncharacterized protein LOC566247 homolog
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 89% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_037690432.1
SIO_010081: si:ch211-89o9.4
subclass of: SO_0000673
so part of: si:ch211-89o9.4
location: complement(join(2699099..2699344,2699747..2699868,2700896..2700970,2702571..2702987,2703750..2703969,2705355..2705516,2705599..2706129,2706219..2706593,2706687..2706851,2708320..2708463,2708643..2708684,2708779..2708910,2709231..2709350,2710376..2710410,2711638..2711684,2711789..2711823,2714389..2714487,2714586..2714792,2714985..2715148,2717317..2717433,2717588..2717754,2719169..2719198,2721254..2721315,2725489..2727022,2751497..2751581,2753231..2753282,2753364..2753524,2753598..2753680,2753759..2753852,2753953..2753991))
location: region:2699099-2753991:-1
so has part: feature:2753953-2753991:-1:exon
so has part: feature:2753759-2753852:-1:exon
so has part: feature:2753598-2753680:-1:exon
so has part: feature:2753364-2753524:-1:exon
so has part: feature:2753231-2753282:-1:exon
so has part: feature:2751497-2751581:-1:exon
so has part: feature:2725489-2727022:-1:exon
so has part: feature:2721254-2721315:-1:exon
so has part: feature:2719169-2719198:-1:exon
so has part: feature:2717588-2717754:-1:exon
so has part: feature:2717317-2717433:-1:exon
so has part: feature:2714985-2715148:-1:exon
so has part: feature:2714586-2714792:-1:exon
so has part: feature:2714389-2714487:-1:exon
so has part: feature:2711789-2711823:-1:exon
so has part: feature:2711638-2711684:-1:exon
so has part: feature:2710376-2710410:-1:exon
so has part: feature:2709231-2709350:-1:exon
so has part: feature:2708779-2708910:-1:exon
so has part: feature:2708643-2708684:-1:exon
so has part: feature:2708320-2708463:-1:exon
so has part: feature:2706687-2706851:-1:exon
so has part: feature:2706219-2706593:-1:exon
so has part: feature:2705599-2706129:-1:exon
so has part: feature:2705355-2705516:-1:exon
so has part: feature:2703750-2703969:-1:exon
so has part: feature:2702571-2702987:-1:exon
so has part: feature:2700896-2700970:-1:exon
so has part: feature:2699747-2699868:-1:exon
so has part: feature:2699099-2699344:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2753953-2753991:-1:exon

position:2753953:-1
position: 2753953
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2753759-2753852:-1:exon

position:2753759:-1
position: 2753759
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2753852:-1
position: 2753852
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2753598-2753680:-1:exon

position:2753598:-1
position: 2753598
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2753680:-1
position: 2753680
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2753364-2753524:-1:exon

position:2753364:-1
position: 2753364
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2753524:-1
position: 2753524
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2753231-2753282:-1:exon

position:2753231:-1
position: 2753231
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2753282:-1
position: 2753282
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2751497-2751581:-1:exon

position:2751497:-1
position: 2751497
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2751581:-1
position: 2751581
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:2725489-2727022:-1:exon

position:2725489:-1
position: 2725489
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2727022:-1
position: 2727022
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:2721254-2721315:-1:exon

position:2721254:-1
position: 2721254
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2721315:-1
position: 2721315
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:2719169-2719198:-1:exon

position:2719169:-1
position: 2719169
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2719198:-1
position: 2719198
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:2717588-2717754:-1:exon

position:2717588:-1
position: 2717588
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2717754:-1
position: 2717754
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:2717317-2717433:-1:exon

position:2717317:-1
position: 2717317
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2717433:-1
position: 2717433
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:2714985-2715148:-1:exon

position:2714985:-1
position: 2714985
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2715148:-1
position: 2715148
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:2714586-2714792:-1:exon

position:2714586:-1
position: 2714586
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2714792:-1
position: 2714792
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:2714389-2714487:-1:exon

position:2714389:-1
position: 2714389
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2714487:-1
position: 2714487
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:2711789-2711823:-1:exon

position:2711789:-1
position: 2711789
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2711823:-1
position: 2711823
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:2711638-2711684:-1:exon

position:2711638:-1
position: 2711638
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2711684:-1
position: 2711684
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:2710376-2710410:-1:exon

position:2710376:-1
position: 2710376
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2710410:-1
position: 2710410
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:2709231-2709350:-1:exon

position:2709231:-1
position: 2709231
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2709350:-1
position: 2709350
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:2708779-2708910:-1:exon

position:2708779:-1
position: 2708779
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2708910:-1
position: 2708910
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:2708643-2708684:-1:exon

position:2708643:-1
position: 2708643
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2708684:-1
position: 2708684
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:2708320-2708463:-1:exon

position:2708320:-1
position: 2708320
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2708463:-1
position: 2708463
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:2706687-2706851:-1:exon

position:2706687:-1
position: 2706687
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2706851:-1
position: 2706851
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:2706219-2706593:-1:exon

position:2706219:-1
position: 2706219
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2706593:-1
position: 2706593
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:2705599-2706129:-1:exon

position:2705599:-1
position: 2705599
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2706129:-1
position: 2706129
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:2705355-2705516:-1:exon

position:2705355:-1
position: 2705355
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2705516:-1
position: 2705516
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 26
SIO_000628: feature:2703750-2703969:-1:exon

position:2703750:-1
position: 2703750
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2703969:-1
position: 2703969
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 27
SIO_000628: feature:2702571-2702987:-1:exon

position:2702571:-1
position: 2702571
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2702987:-1
position: 2702987
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 28
SIO_000628: feature:2700896-2700970:-1:exon

position:2700896:-1
position: 2700896
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2700970:-1
position: 2700970
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 29
SIO_000628: feature:2699747-2699868:-1:exon

position:2699747:-1
position: 2699747
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2699868:-1
position: 2699868
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 30
SIO_000628: feature:2699099-2699344:-1:exon

position:2699344:-1
position: 2699344
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

si:ch211-89o9.4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 451745
gene: si:ch211-89o9.4
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: zinc finger protein 638
translation: MFRPTAMTSLALTELPAAEEVSVTLPEEAELLPVGTVSSILQQLVIIQSLKDTPPLNDDSVLFTADRTSVGKVFEVFGPVSSPLYILRFNSEDQIKSKRLTEGLLLYYAPSFKEYTGYILTQQLTRLRGSDASWKNDEEPPEEALDYSDDEKEQEAKRKMKNAKKTQSGNTGLTRDTSFICGPVNAAAALQLFQFYILTPIALRQIAALAPVVVSGHFHQSELAAVLTRHLALLSLLTIQEVSAEELDIHTNRTSSTVTGLGXSAAMYHPRQQRSQPFLNAPRPPASQQLNNQPPMDFQFPYPNQLPGEMGSVLGMQGRMDQHQGSGSGISQQRDFGSIPMPLPADNQSGLQQGVNWSSYQPPAKLFASLPPSAGHQGTHLQNQKRQTGAPNWKPPVHDSPLPRTQLSHTAGGGGDSKTLYTPESAGSILASFGLSNEDLEVLSHYPDDQLTPDTLPFILRNIQIKKSGMQKQMDSTSSMFSHNLDDGAGPSRRSSEVPGILTVTQTAGKIIDYGHASQQKYGSDTRKTFKREQLSNASTTRMYPATSSAATPKMGKYKRPILEHIDLSLNEEDYRRTGREKHRDEDYRRMTRDKHRSHSPPGRKFVPSPKSYHVNRDYRYLESKLRSEGSSKLPLSSSSESRPHDSSKNSPTPTMISDFDAVPPKVYPHTCSLCDTNCDQEKDWLEHINTVDHTVACRVLRVKYPDWKPALSSRRRNYRNQASSEPKDDSPFDSMSQSQSRSPSPYSNEGGTYLSRPRRRSYSPRRLPERSHRADHHRFHSPPYSHGKYLPVRERARDHPLRSRTSSGIVSRSGVKRLRRGSCDTSRSLSSSAAEHSSKHDPLAHSTKTVKRAPKPGAKTTKSVKPPLAKKKKVVAADSKDSTVAGCLVYMTGIPKDATEQEVTDMVGSFGKINNVVLMPCSEEDREKGQTASVCMMRAMDALAFVAAPNLCIREQKITASVAKKPEAKQLPDTDNKPDANPDKKADVSSSAGGDAIQMTSDQSCKVLITGLPESGWSETDIIQLVQPFGNSFDIILSTNARKALVSLADLDVAQEMVKVHSFKSAMVNNTEVKLSLLKQNVGLSTPVALYNLFMGSVDPLENVAPIVWNRLLVIKNVPDTPSGSSEVVKLVQRFGKVKRNLVLSTNNMVICEMLTAVRALAVYKRFLKFPCIIQNNPLFFSRNPDPKPNAHTKVIAAYCDSSEVKPVSDNDSQAAAEAPKEEEEEATSEISAAPAGNSCDEKSVETSVEDKSVEQTESKDDKTGELGVSESSAVLDTEPHSDSPTEPSNVLAAESETTEVSTEVENMEATPVSCEVTSQETGLPQPRTITQAMVDTLLEECRATRSASKQQQSDKPAAALDKEQKKTQQQPKQKGKAAIKKKVLSKGATEKQEVVNKQEAERKEKEEGEKEEREKENARREKERAERAKRIRERRDEERERREEERRERERREEERRERERREEERERRDRKRGYGEHQPRSRLDRYRQSSRRDERSGVETKNRTEDEEDFPFNMSDFVTVDEVGDVAEHPCFLSPTVHEETSQDPSVSPKPAQQDVPEDKPVESTVTQELSNEKILESEPVSILTVEEPGSRPEQDLRNTDSSLLASQDHCVPSEAPNLSEAPGSDADPEKGTLLAASLDSTSNTEPLLTSAQAPAADSSSDGLAASVVTTKSEDEKESGPVLHSLTRNEKMEASDSHEQEVEKESGPVGHDVVQSKKVEASHSQEQEVEKESGPVSHGPTQSKKVEASDSQKQDVHVEENQKATDKTATGTLEKTEESVNKDQLLRPYDPQTPVGMEYLVPKTGFFCNACSRFFCGGKVAEIGHCKTLKHYENLKKLLQKAEPESEQTPTA
SIO_010081: si:ch211-89o9.4
subclass of: SO_0000673
so part of: si:ch211-89o9.4
location: complement(join(2699294..2699344,2699747..2699868,2700896..2700970,2702571..2702987,2703750..2703969,2705355..2705516,2705599..2706129,2706219..2706593,2706687..2706851,2708320..2708463,2708643..2708684,2708779..2708910,2709231..2709350,2710376..2710410,2711638..2711684,2711789..2711823,2714389..2714487,2714586..2714792,2714985..2715148,2717317..2717433,2717588..2717754,2719169..2719198,2721254..2721315,2725489..2727022,2751497..2751581,2753231..2753282,2753364..2753524,2753598..2753680,2753759..2753852,2753953..2753991))
location: region:2699294-2753991:-1
so has part: feature:2753953-2753991:-1:exon
so has part: feature:2753759-2753852:-1:exon
so has part: feature:2753598-2753680:-1:exon
so has part: feature:2753364-2753524:-1:exon
so has part: feature:2753231-2753282:-1:exon
so has part: feature:2751497-2751581:-1:exon
so has part: feature:2725489-2727022:-1:exon
so has part: feature:2721254-2721315:-1:exon
so has part: feature:2719169-2719198:-1:exon
so has part: feature:2717588-2717754:-1:exon
so has part: feature:2717317-2717433:-1:exon
so has part: feature:2714985-2715148:-1:exon
so has part: feature:2714586-2714792:-1:exon
so has part: feature:2714389-2714487:-1:exon
so has part: feature:2711789-2711823:-1:exon
so has part: feature:2711638-2711684:-1:exon
so has part: feature:2710376-2710410:-1:exon
so has part: feature:2709231-2709350:-1:exon
so has part: feature:2708779-2708910:-1:exon
so has part: feature:2708643-2708684:-1:exon
so has part: feature:2708320-2708463:-1:exon
so has part: feature:2706687-2706851:-1:exon
so has part: feature:2706219-2706593:-1:exon
so has part: feature:2705599-2706129:-1:exon
so has part: feature:2705355-2705516:-1:exon
so has part: feature:2703750-2703969:-1:exon
so has part: feature:2702571-2702987:-1:exon
so has part: feature:2700896-2700970:-1:exon
so has part: feature:2699747-2699868:-1:exon
so has part: feature:2699294-2699344:-1:exon

XP_037546360.1
type: Protein
SIO_000068: ncbiprotein

position:2699294:-1
position: 2699294
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2753953-2753991:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2753759-2753852:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2753598-2753680:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2753364-2753524:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2753231-2753282:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2751497-2751581:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2725489-2727022:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2721254-2721315:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2719169-2719198:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2717588-2717754:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2717317-2717433:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2714985-2715148:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2714586-2714792:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2714389-2714487:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2711789-2711823:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2711638-2711684:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:2710376-2710410:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:2709231-2709350:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:2708779-2708910:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:2708643-2708684:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:2708320-2708463:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:2706687-2706851:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:2706219-2706593:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:2705599-2706129:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:2705355-2705516:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:2703750-2703969:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:2702571-2702987:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:2700896-2700970:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:2699747-2699868:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:2699294-2699344:-1:exon

htt
type: Gene
subclass of: SO_0000704
RO_0002162: 451745
gene: htt
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2761575..>2802602
location: region:2761575-2802602:1
so has part: feature:2761575-2802602:1:exon
subclass of: SO_0000010

119423251
type: Gene
SIO_000068: ncbigene

position:2761575:1
position: 2761575
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2802602:1
position: 2802602
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2761575-2802602:1:exon

htt
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 451745
gene: htt
product: huntingtin
inference: similar to RNA sequence (same species):INSD:GELZ01011231.1
exception: annotated by transcript or proteomic data
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: added 430 bases not found in genome assembly; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 93% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_037690668.1
SIO_010081: htt
subclass of: SO_0000673
so part of: htt
location: join(2761575..2761672,2763387..2763470,2764309..2764429,2766241..2766300,2766451..2766530,2766941..2767079,2767198..2767339,2767500..2767678,2767752..2767956,2768266..2768313,2768577..2768654,2769993..2770372,2774704..2774830,2774908..2775023,2776065..2776176,2777614..2777751,2778195..2778353,2778439..2778536,2778608..2778747,2778870..2778933,2779033..2779133,2779277..2779423,2780501..2780621,2780705..2780850,2781167..2781351,2781423..2781640,2781795..2781921,2782114..2782241,2782355..2782465,2782586..2782663,2783124..2783347,2784184..2784262,2784385..2784546,2784623..2784678,2784825..2784973,2785152..2785288,2785366..2785482,2786347..2786469,2786558..2786817,2787320..2787462,2787592..2787814,2787959..2788100,2788338..2788517,2790032..2790208,2791106..2791182,2791386..2791521,2791602..2791724,2792307..2792514,2792600..2792745,2793564..2793741,2793853..2793954,2794068..2794252,2794334..2794460,2794560..2794663,2795388..2795542,2796020..2796159,2796242..2796327,2796436..2796566,2799092..2799224,2799428..2799583,2799686..2799876,2801274..2801388,2802389..>2802602)
location: region:2761575-2802602:1
so has part: feature:2761575-2761672:1:exon
so has part: feature:2763387-2763470:1:exon
so has part: feature:2764309-2764429:1:exon
so has part: feature:2766241-2766300:1:exon
so has part: feature:2766451-2766530:1:exon
so has part: feature:2766941-2767079:1:exon
so has part: feature:2767198-2767339:1:exon
so has part: feature:2767500-2767678:1:exon
so has part: feature:2767752-2767956:1:exon
so has part: feature:2768266-2768313:1:exon
so has part: feature:2768577-2768654:1:exon
so has part: feature:2769993-2770372:1:exon
so has part: feature:2774704-2774830:1:exon
so has part: feature:2774908-2775023:1:exon
so has part: feature:2776065-2776176:1:exon
so has part: feature:2777614-2777751:1:exon
so has part: feature:2778195-2778353:1:exon
so has part: feature:2778439-2778536:1:exon
so has part: feature:2778608-2778747:1:exon
so has part: feature:2778870-2778933:1:exon
so has part: feature:2779033-2779133:1:exon
so has part: feature:2779277-2779423:1:exon
so has part: feature:2780501-2780621:1:exon
so has part: feature:2780705-2780850:1:exon
so has part: feature:2781167-2781351:1:exon
so has part: feature:2781423-2781640:1:exon
so has part: feature:2781795-2781921:1:exon
so has part: feature:2782114-2782241:1:exon
so has part: feature:2782355-2782465:1:exon
so has part: feature:2782586-2782663:1:exon
so has part: feature:2783124-2783347:1:exon
so has part: feature:2784184-2784262:1:exon
so has part: feature:2784385-2784546:1:exon
so has part: feature:2784623-2784678:1:exon
so has part: feature:2784825-2784973:1:exon
so has part: feature:2785152-2785288:1:exon
so has part: feature:2785366-2785482:1:exon
so has part: feature:2786347-2786469:1:exon
so has part: feature:2786558-2786817:1:exon
so has part: feature:2787320-2787462:1:exon
so has part: feature:2787592-2787814:1:exon
so has part: feature:2787959-2788100:1:exon
so has part: feature:2788338-2788517:1:exon
so has part: feature:2790032-2790208:1:exon
so has part: feature:2791106-2791182:1:exon
so has part: feature:2791386-2791521:1:exon
so has part: feature:2791602-2791724:1:exon
so has part: feature:2792307-2792514:1:exon
so has part: feature:2792600-2792745:1:exon
so has part: feature:2793564-2793741:1:exon
so has part: feature:2793853-2793954:1:exon
so has part: feature:2794068-2794252:1:exon
so has part: feature:2794334-2794460:1:exon
so has part: feature:2794560-2794663:1:exon
so has part: feature:2795388-2795542:1:exon
so has part: feature:2796020-2796159:1:exon
so has part: feature:2796242-2796327:1:exon
so has part: feature:2796436-2796566:1:exon
so has part: feature:2799092-2799224:1:exon
so has part: feature:2799428-2799583:1:exon
so has part: feature:2799686-2799876:1:exon
so has part: feature:2801274-2801388:1:exon
so has part: feature:2802389-2802602:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2761575-2761672:1:exon

position:2761672:1
position: 2761672
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2763387-2763470:1:exon

position:2763387:1
position: 2763387
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2763470:1
position: 2763470
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2764309-2764429:1:exon

position:2764309:1
position: 2764309
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2764429:1
position: 2764429
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2766241-2766300:1:exon

position:2766241:1
position: 2766241
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2766300:1
position: 2766300
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2766451-2766530:1:exon

position:2766451:1
position: 2766451
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2766530:1
position: 2766530
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2766941-2767079:1:exon

position:2766941:1
position: 2766941
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2767079:1
position: 2767079
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:2767198-2767339:1:exon

position:2767198:1
position: 2767198
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2767339:1
position: 2767339
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:2767500-2767678:1:exon

position:2767500:1
position: 2767500
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2767678:1
position: 2767678
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:2767752-2767956:1:exon

position:2767752:1
position: 2767752
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2767956:1
position: 2767956
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:2768266-2768313:1:exon

position:2768266:1
position: 2768266
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2768313:1
position: 2768313
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:2768577-2768654:1:exon

position:2768577:1
position: 2768577
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2768654:1
position: 2768654
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:2769993-2770372:1:exon

position:2769993:1
position: 2769993
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2770372:1
position: 2770372
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:2774704-2774830:1:exon

position:2774704:1
position: 2774704
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2774830:1
position: 2774830
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:2774908-2775023:1:exon

position:2774908:1
position: 2774908
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2775023:1
position: 2775023
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:2776065-2776176:1:exon

position:2776065:1
position: 2776065
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2776176:1
position: 2776176
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:2777614-2777751:1:exon

position:2777614:1
position: 2777614
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2777751:1
position: 2777751
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:2778195-2778353:1:exon

position:2778195:1
position: 2778195
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2778353:1
position: 2778353
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:2778439-2778536:1:exon

position:2778439:1
position: 2778439
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2778536:1
position: 2778536
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:2778608-2778747:1:exon

position:2778608:1
position: 2778608
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2778747:1
position: 2778747
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:2778870-2778933:1:exon

position:2778870:1
position: 2778870
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2778933:1
position: 2778933
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:2779033-2779133:1:exon

position:2779033:1
position: 2779033
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2779133:1
position: 2779133
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:2779277-2779423:1:exon

position:2779277:1
position: 2779277
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2779423:1
position: 2779423
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:2780501-2780621:1:exon

position:2780501:1
position: 2780501
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2780621:1
position: 2780621
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:2780705-2780850:1:exon

position:2780705:1
position: 2780705
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2780850:1
position: 2780850
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:2781167-2781351:1:exon

position:2781167:1
position: 2781167
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2781351:1
position: 2781351
reference: sequence
type: ForwardStrandPosition
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urn:…
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