Nematolebias whitei isolate Nwh7 chromosome 15, NemWhi1, whole genome shotgun sequence.
type: Entry
definition: Nematolebias whitei isolate Nwh7 chromosome 15, NemWhi1, whole genome shotgun sequence.
sequence version: NC_056512.1
sequence date: 2021-07-29
sequence: sequence
division: CON
label: NC_056512.1
type: RefSeq
SIO_000068: refseq
dblink: PRJNA678356
dblink: SAMN12588121
keyword: WGS
keyword: RefSeq
source: Nematolebias whitei (Rio pearlfish)
organism: Nematolebias whitei
taxonomy: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Atherinomorphae; Cyprinodontiformes; Rivulidae; Nematolebias.
comment: REFSEQ INFORMATION: The reference sequence is identical to\nCM029747.1.\nAssembly name: NemWhi1\nThe genomic sequence for this RefSeq record is from the\nwhole-genome assembly released by the Michigan State University on\n2020/10/22. The original whole-genome shotgun project has the\naccession JAAMPK000000000.1.\n\n##Genome-Assembly-Data-START##\nAssembly Provider :: Michigan State University\nAssembly Method :: SuperNova, Chicago, HiC v. April 2020\nAssembly Name :: NemWhi1\nGenome Representation :: Full\nExpected Final Version :: Yes\nGenome Coverage :: 53.63x\nSequencing Technology :: Illumina\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI\nAnnotation Status :: Updated annotation\nAnnotation Name :: Nematolebias whitei Updated\n Annotation Release 100.20210725\nAnnotation Version :: 100.20210725\nAnnotation Pipeline :: NCBI eukaryotic genome annotation\n pipeline\nAnnotation Software Version :: 9.0\nAnnotation Method :: Best-placed RefSeq; propagated\n RefSeq model\nFeatures Annotated :: Gene; mRNA; CDS; ncRNA\n##Genome-Annotation-Data-END##

sequence
subclass of: SO_0000340
sequence length: 47008429
topology: linear
so has quality: SO_0000987
location: 1..47008429
location: region:1-47008429:1
RO_0002162: 451745

NC_056512
type: RefSeq
SIO_000068: refseq

PRJNA678356
type: BioProject
SIO_000068: bioproject

SAMN12588121
type: BioSample
SIO_000068: biosample

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:47008429:1
position: 47008429
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-47008429:1:source
so part of: sequence
organism: Nematolebias whitei
mol type: genomic DNA
isolate: Nwh7
chromosome: 15
sex: female
tissue type: liver
dev stage: adult
country: Brazil: Barra de Sao Joao

451745
type: Taxonomy
SIO_000068: taxonomy

LOC119421421
type: Gene
subclass of: SO_0000704
RO_0002162: 451745
gene: LOC119421421
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 21465..>293348
location: region:21465-293348:1
so has part: feature:21465-293348:1:exon
subclass of: SO_0000010

119421421
type: Gene
SIO_000068: ncbigene

position:21465:1
position: 21465
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:293348:1
position: 293348
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:21465-293348:1:exon

LOC119421421
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 451745
gene: LOC119421421
product: histone deacetylase 5
inference: similar to RNA sequence (same species):INSD:GELZ01023710.1
exception: annotated by transcript or proteomic data
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: added 376 bases not found in genome assembly; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 99% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_037688782.1
SIO_010081: LOC119421421
subclass of: SO_0000673
so part of: LOC119421421
location: join(21465..21724,115223..115366,218254..218340,278613..278857,278936..279080,279155..279260,293215..>293348)
location: region:21465-293348:1
so has part: feature:21465-21724:1:exon
so has part: feature:115223-115366:1:exon
so has part: feature:218254-218340:1:exon
so has part: feature:278613-278857:1:exon
so has part: feature:278936-279080:1:exon
so has part: feature:279155-279260:1:exon
so has part: feature:293215-293348:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:21465-21724:1:exon

position:21724:1
position: 21724
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:115223-115366:1:exon

position:115223:1
position: 115223
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:115366:1
position: 115366
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:218254-218340:1:exon

position:218254:1
position: 218254
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:218340:1
position: 218340
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:278613-278857:1:exon

position:278613:1
position: 278613
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:278857:1
position: 278857
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:278936-279080:1:exon

position:278936:1
position: 278936
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:279080:1
position: 279080
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:279155-279260:1:exon

position:279155:1
position: 279155
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:279260:1
position: 279260
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:293215-293348:1:exon

position:293215:1
position: 293215
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC119421421
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 451745
gene: LOC119421421
inference: similar to RNA sequence (same species):INSD:GELZ01023710.1
exception: annotated by transcript or proteomic data
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: added 376 bases not found in genome assembly; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: histone deacetylase 5
translation: MNFLQTSVVDVKNSLPSGMQSPAGTTPELGGGEGDGSGVPVESSGGGPVDLRTEPRVGGSLSSSVAMDTTLKEQQLQQELVLLKQQQELQKQLLFAEFQKKHEILTRQHEVQLQEHLKQQQELLAAKRQQELEQKRKLEQQRHEEQEKQRLEQHLLLLRNKEKSKESAIASTEVKLKLQEFLLSKKEPGPGGLNHSFSLKCWGAQHTSLEQSSPPQSNTPGTPPSYKLPPLLGNYEGKDDFPLRKTVSEPNLKVRSRLKQKVAERRSSPLLRRKDGTIISTFKKRAIEISVSSLCNSAPGSGPSSPNSSNTAISNGNTSSVPNIQTELRSLHQTLGTEGTLSPLSLYTSPSLPNISLGLPANTHIPSLNPT
SIO_010081: LOC119421421
subclass of: SO_0000673
so part of: LOC119421421
location: join(115345..115366,218254..218340,278613..278857,278936..279080,279155..279260,293215..>293348)
location: region:115345-293348:1
so has part: feature:115345-115366:1:exon
so has part: feature:218254-218340:1:exon
so has part: feature:278613-278857:1:exon
so has part: feature:278936-279080:1:exon
so has part: feature:279155-279260:1:exon
so has part: feature:293215-293348:1:exon

XP_037544710.1
type: Protein
SIO_000068: ncbiprotein

position:115345:1
position: 115345
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:115345-115366:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:218254-218340:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:278613-278857:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:278936-279080:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:279155-279260:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:293215-293348:1:exon

LOC119421422
type: Gene
subclass of: SO_0000704
RO_0002162: 451745
gene: LOC119421422
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(137093..138953)
location: region:137093-138953:-1
so has part: feature:137093-138953:-1:exon
subclass of: SO_0000011

119421422
type: Gene
SIO_000068: ncbigene

position:137093:-1
position: 137093
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:138953:-1
position: 138953
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:137093-138953:-1:exon

LOC119421422
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 451745
nc RNA class: lncRNA
gene: LOC119421422
product: uncharacterized LOC119421422
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XR_005187365.1
SIO_010081: LOC119421422
subclass of: SO_0000673
so part of: LOC119421422
location: complement(join(137093..137195,138003..138036,138881..138953))
location: region:137093-138953:-1
so has part: feature:138881-138953:-1:exon
so has part: feature:138003-138036:-1:exon
so has part: feature:137093-137195:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:138881-138953:-1:exon

position:138881:-1
position: 138881
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:138003-138036:-1:exon

position:138003:-1
position: 138003
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:138036:-1
position: 138036
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:137093-137195:-1:exon

position:137195:-1
position: 137195
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

hdac5
type: Gene
subclass of: SO_0000704
RO_0002162: 451745
gene: hdac5
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(335285..548169)
location: region:335285-548169:-1
so has part: feature:335285-548169:-1:exon
subclass of: SO_0000010

119421927
type: Gene
SIO_000068: ncbigene

position:335285:-1
position: 335285
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:548169:-1
position: 548169
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:335285-548169:-1:exon

hdac5
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 451745
gene: hdac5
product: histone deacetylase 5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 87% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_037689291.1
SIO_010081: hdac5
subclass of: SO_0000673
so part of: hdac5
location: complement(join(335285..335324,338942..339113,339194..339275,339660..339793,339901..340019,340249..340346,361261..361380,361609..361696,361783..361838,361911..362018,362315..362364,388064..388184,388271..388404,442639..442753,542244..542430,542523..542638,542714..542907,542982..543092,548063..548169))
location: region:335285-548169:-1
so has part: feature:548063-548169:-1:exon
so has part: feature:542982-543092:-1:exon
so has part: feature:542714-542907:-1:exon
so has part: feature:542523-542638:-1:exon
so has part: feature:542244-542430:-1:exon
so has part: feature:442639-442753:-1:exon
so has part: feature:388271-388404:-1:exon
so has part: feature:388064-388184:-1:exon
so has part: feature:362315-362364:-1:exon
so has part: feature:361911-362018:-1:exon
so has part: feature:361783-361838:-1:exon
so has part: feature:361609-361696:-1:exon
so has part: feature:361261-361380:-1:exon
so has part: feature:340249-340346:-1:exon
so has part: feature:339901-340019:-1:exon
so has part: feature:339660-339793:-1:exon
so has part: feature:339194-339275:-1:exon
so has part: feature:338942-339113:-1:exon
so has part: feature:335285-335324:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:548063-548169:-1:exon

position:548063:-1
position: 548063
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:542982-543092:-1:exon

position:542982:-1
position: 542982
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:543092:-1
position: 543092
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:542714-542907:-1:exon

position:542714:-1
position: 542714
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:542907:-1
position: 542907
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:542523-542638:-1:exon

position:542523:-1
position: 542523
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:542638:-1
position: 542638
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:542244-542430:-1:exon

position:542244:-1
position: 542244
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:542430:-1
position: 542430
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:442639-442753:-1:exon

position:442639:-1
position: 442639
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:442753:-1
position: 442753
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:388271-388404:-1:exon

position:388271:-1
position: 388271
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:388404:-1
position: 388404
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:388064-388184:-1:exon

position:388064:-1
position: 388064
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:388184:-1
position: 388184
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:362315-362364:-1:exon

position:362315:-1
position: 362315
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:362364:-1
position: 362364
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:361911-362018:-1:exon

position:361911:-1
position: 361911
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:362018:-1
position: 362018
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:361783-361838:-1:exon

position:361783:-1
position: 361783
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:361838:-1
position: 361838
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:361609-361696:-1:exon

position:361609:-1
position: 361609
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:361696:-1
position: 361696
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:361261-361380:-1:exon

position:361261:-1
position: 361261
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:361380:-1
position: 361380
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:340249-340346:-1:exon

position:340249:-1
position: 340249
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:340346:-1
position: 340346
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:339901-340019:-1:exon

position:339901:-1
position: 339901
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:340019:-1
position: 340019
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:339660-339793:-1:exon

position:339660:-1
position: 339660
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:339793:-1
position: 339793
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:339194-339275:-1:exon

position:339194:-1
position: 339194
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:339275:-1
position: 339275
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:338942-339113:-1:exon

position:338942:-1
position: 338942
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:339113:-1
position: 339113
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:335285-335324:-1:exon

position:335324:-1
position: 335324
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

hdac5
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 451745
gene: hdac5
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: histone deacetylase 5
translation: MLVPMYNQSPLVSAERCVSTSMRPINKLPRHRPLARTQSAPLPQSPQALQQLVVHQQHQHFLEKHYKILSKVADLPRPPPTHPEEIEEELTETSDMQEDEDPGLNRLQKEGSDDSTHSSEQHDMPVKGKEEPRNIHIKGESTDSDLDEEDEDVIQLRESEEEKGSYFQQSLQQLGLFQSSLTHRPLGRAKSSPATGIVPIKHLFTTGLVYDGLMLKHQCLCGNAHIHPEHAGRVQSIWSRLQETGLLSRCERIRGRKASLDEIQSVHSEFHTLLYGTSPLNRHKLDHKKLLGPISQKMYAVLPCGGIGVDSDTVWNEMHSSAAVRMAVGSVIELAFKVAAGELKNGFAVVRPPGHHAEESTAMGFCFFNSVAITAKLLQQKLGVGKILIVDWDIHHGNGTQQAFYNNPSILYISLHRYDDGNFFPGSGAPEEVGSGAGLGFNVNIAWTGGVEPPMGDVEYLTAFRSVVMPIAQQFSPDVILVSAGFDAVEGHQSPLGGYNVSAKCFGQLTQLLMALAGGRVVMALEGGHDLTAICDASEACVSALLGDLCDSDFQWPQETPCPKACSSLETIIEIQSKHWSCLQSLSLTSGQSLLLGHQGQSEKDEAETVSAMASLSVDVDQPSSVGEITENSRSTVEPMEEEPVL
SIO_010081: hdac5
subclass of: SO_0000673
so part of: hdac5
location: complement(join(335285..335324,338942..339113,339194..339275,339660..339793,339901..340019,340249..340346,361261..361380,361609..361696,361783..361838,361911..362018,362315..362364,388064..388184,388271..388404,442639..442753,542244..542430,542523..542638,542714..542907,542982..542988))
location: region:335285-542988:-1
so has part: feature:542982-542988:-1:exon
so has part: feature:542714-542907:-1:exon
so has part: feature:542523-542638:-1:exon
so has part: feature:542244-542430:-1:exon
so has part: feature:442639-442753:-1:exon
so has part: feature:388271-388404:-1:exon
so has part: feature:388064-388184:-1:exon
so has part: feature:362315-362364:-1:exon
so has part: feature:361911-362018:-1:exon
so has part: feature:361783-361838:-1:exon
so has part: feature:361609-361696:-1:exon
so has part: feature:361261-361380:-1:exon
so has part: feature:340249-340346:-1:exon
so has part: feature:339901-340019:-1:exon
so has part: feature:339660-339793:-1:exon
so has part: feature:339194-339275:-1:exon
so has part: feature:338942-339113:-1:exon
so has part: feature:335285-335324:-1:exon

XP_037545219.1
type: Protein
SIO_000068: ncbiprotein

position:542988:-1
position: 542988
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:542982-542988:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:542714-542907:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:542523-542638:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:542244-542430:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:442639-442753:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:388271-388404:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:388064-388184:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:362315-362364:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:361911-362018:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:361783-361838:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:361609-361696:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:361261-361380:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:340249-340346:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:339901-340019:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:339660-339793:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:339194-339275:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:338942-339113:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:335285-335324:-1:exon

LOC119421424
type: Gene
subclass of: SO_0000704
RO_0002162: 451745
gene: LOC119421424
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(597356..601846)
location: region:597356-601846:-1
so has part: feature:597356-601846:-1:exon
subclass of: SO_0000011

119421424
type: Gene
SIO_000068: ncbigene

position:597356:-1
position: 597356
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:601846:-1
position: 601846
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:597356-601846:-1:exon

LOC119421424
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 451745
nc RNA class: lncRNA
gene: LOC119421424
product: uncharacterized LOC119421424
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XR_005187366.1
SIO_010081: LOC119421424
subclass of: SO_0000673
so part of: LOC119421424
location: complement(join(597356..597466,598935..599044,601711..601846))
location: region:597356-601846:-1
so has part: feature:601711-601846:-1:exon
so has part: feature:598935-599044:-1:exon
so has part: feature:597356-597466:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:601711-601846:-1:exon

position:601711:-1
position: 601711
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:598935-599044:-1:exon

position:598935:-1
position: 598935
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:599044:-1
position: 599044
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:597356-597466:-1:exon

position:597466:-1
position: 597466
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC119421999
type: Gene
subclass of: SO_0000704
RO_0002162: 451745
gene: LOC119421999
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(721621..728008)
location: region:721621-728008:-1
so has part: feature:721621-728008:-1:exon
subclass of: SO_0000011

119421999
type: Gene
SIO_000068: ncbigene

position:721621:-1
position: 721621
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:728008:-1
position: 728008
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:721621-728008:-1:exon

LOC119421999
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 451745
nc RNA class: lncRNA
gene: LOC119421999
product: uncharacterized LOC119421999
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XR_005187385.1
SIO_010081: LOC119421999
subclass of: SO_0000673
so part of: LOC119421999
location: complement(join(721621..721641,724515..724603,727584..727640,727950..728008))
location: region:721621-728008:-1
so has part: feature:727950-728008:-1:exon
so has part: feature:727584-727640:-1:exon
so has part: feature:724515-724603:-1:exon
so has part: feature:721621-721641:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:727950-728008:-1:exon

position:727950:-1
position: 727950
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:727584-727640:-1:exon

position:727584:-1
position: 727584
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:727640:-1
position: 727640
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:724515-724603:-1:exon

position:724515:-1
position: 724515
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:724603:-1
position: 724603
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:721621-721641:-1:exon

position:721641:-1
position: 721641
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

pex12
type: Gene
subclass of: SO_0000704
RO_0002162: 451745
gene: pex12
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(741215..755555)
location: region:741215-755555:-1
so has part: feature:741215-755555:-1:exon
subclass of: SO_0000010

119422000
type: Gene
SIO_000068: ncbigene

position:741215:-1
position: 741215
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:755555:-1
position: 755555
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:741215-755555:-1:exon

pex12
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 451745
gene: pex12
product: peroxisomal biogenesis factor 12
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 Proteins, and 63% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_037689349.1
SIO_010081: pex12
subclass of: SO_0000673
so part of: pex12
location: complement(join(741215..741660,742088..742623,743880..744059,755508..755555))
location: region:741215-755555:-1
so has part: feature:755508-755555:-1:exon
so has part: feature:743880-744059:-1:exon
so has part: feature:742088-742623:-1:exon
so has part: feature:741215-741660:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:755508-755555:-1:exon

position:755508:-1
position: 755508
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:743880-744059:-1:exon

position:743880:-1
position: 743880
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:744059:-1
position: 744059
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:742088-742623:-1:exon

position:742088:-1
position: 742088
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:742623:-1
position: 742623
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:741215-741660:-1:exon

position:741660:-1
position: 741660
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

pex12
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 451745
gene: pex12
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: peroxisome assembly protein 12
translation: MAEAGAHLTSTAITEQPSVFEVLAQESLMEAIRPALRHTVKVLAESNPSRYSFLWRRFDELYLLLDLLLQNHFLFHCSASFSENFYGLKRVSGVLGLPVNWSLHRKSHWHSLLLLCLVPYLQIKLEATLARQRDEEDFSIRLAQTWRQRLHGTAVAAYPYASLAWWAWILCQQLLFVFGLSGSHSPLLWLLNIRLARLNAQDLRDMEQRARTTTDPAGSSLLQRTWWLLSQAARGTAVSLSTSLSLVVFFLQFLDWWYSTENQSTMKTLTSLPAPPPPLHLQELQQGAGCRTCPLCRKSWTNTTVLSTSGFVFCYRCVYMYVKANRRCPLTRFPSELHHLIKIYTPET
SIO_010081: pex12
subclass of: SO_0000673
so part of: pex12
location: complement(join(741273..741660,742088..742623,743880..744002))
location: region:741273-744002:-1
so has part: feature:743880-744002:-1:exon
so has part: feature:742088-742623:-1:exon
so has part: feature:741273-741660:-1:exon

XP_037545277.1
type: Protein
SIO_000068: ncbiprotein

position:741273:-1
position: 741273
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:744002:-1
position: 744002
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:743880-744002:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:742088-742623:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:741273-741660:-1:exon

LOC119421425
type: Gene
subclass of: SO_0000704
RO_0002162: 451745
gene: LOC119421425
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(805263..824159)
location: region:805263-824159:-1
so has part: feature:805263-824159:-1:exon
subclass of: SO_0000010

119421425
type: Gene
SIO_000068: ncbigene

position:805263:-1
position: 805263
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:824159:-1
position: 824159
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:805263-824159:-1:exon

LOC119421425
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 451745
gene: LOC119421425
product: collagen alpha-1(I) chain
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 68 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_037688783.1
SIO_010081: LOC119421425
subclass of: SO_0000673
so part of: LOC119421425
location: complement(join(805263..805979,806203..806445,806701..806891,807047..807326,807465..807572,807681..807734,807833..807940,808019..808072,808171..808278,808498..808551,808639..808746,809127..809234,809449..809610,809717..809770,809901..809954,810060..810167,810274..810327,810441..810602,810861..810968,811067..811165,811729..811773,811868..811975,812092..812145,812221..812274,812368..812466,812541..812594,812673..812771,812877..812930,813311..813418,813513..813566,813735..813833,813960..814004,814126..814224,814513..814566,815572..815616,815706..815759,815846..815890,816351..816404,816483..816536,816612..816665,816741..816794,816879..816932,818775..818819,819128..819196,821042..821134,822020..822055,822267..822289,822367..822558,823922..824159))
location: region:805263-824159:-1
so has part: feature:823922-824159:-1:exon
so has part: feature:822367-822558:-1:exon
so has part: feature:822267-822289:-1:exon
so has part: feature:822020-822055:-1:exon
so has part: feature:821042-821134:-1:exon
so has part: feature:819128-819196:-1:exon
so has part: feature:818775-818819:-1:exon
so has part: feature:816879-816932:-1:exon
so has part: feature:816741-816794:-1:exon
so has part: feature:816612-816665:-1:exon
so has part: feature:816483-816536:-1:exon
so has part: feature:816351-816404:-1:exon
so has part: feature:815846-815890:-1:exon
so has part: feature:815706-815759:-1:exon
so has part: feature:815572-815616:-1:exon
so has part: feature:814513-814566:-1:exon
so has part: feature:814126-814224:-1:exon
so has part: feature:813960-814004:-1:exon
so has part: feature:813735-813833:-1:exon
so has part: feature:813513-813566:-1:exon
so has part: feature:813311-813418:-1:exon
so has part: feature:812877-812930:-1:exon
so has part: feature:812673-812771:-1:exon
so has part: feature:812541-812594:-1:exon
so has part: feature:812368-812466:-1:exon
so has part: feature:812221-812274:-1:exon
so has part: feature:812092-812145:-1:exon
so has part: feature:811868-811975:-1:exon
so has part: feature:811729-811773:-1:exon
so has part: feature:811067-811165:-1:exon
so has part: feature:810861-810968:-1:exon
so has part: feature:810441-810602:-1:exon
so has part: feature:810274-810327:-1:exon
so has part: feature:810060-810167:-1:exon
so has part: feature:809901-809954:-1:exon
so has part: feature:809717-809770:-1:exon
so has part: feature:809449-809610:-1:exon
so has part: feature:809127-809234:-1:exon
so has part: feature:808639-808746:-1:exon
so has part: feature:808498-808551:-1:exon
so has part: feature:808171-808278:-1:exon
so has part: feature:808019-808072:-1:exon
so has part: feature:807833-807940:-1:exon
so has part: feature:807681-807734:-1:exon
so has part: feature:807465-807572:-1:exon
so has part: feature:807047-807326:-1:exon
so has part: feature:806701-806891:-1:exon
so has part: feature:806203-806445:-1:exon
so has part: feature:805263-805979:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:823922-824159:-1:exon

position:823922:-1
position: 823922
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:822367-822558:-1:exon

position:822367:-1
position: 822367
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:822558:-1
position: 822558
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:822267-822289:-1:exon

position:822267:-1
position: 822267
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:822289:-1
position: 822289
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:822020-822055:-1:exon

position:822020:-1
position: 822020
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:822055:-1
position: 822055
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:821042-821134:-1:exon

position:821042:-1
position: 821042
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:821134:-1
position: 821134
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:819128-819196:-1:exon

position:819128:-1
position: 819128
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:819196:-1
position: 819196
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:818775-818819:-1:exon

position:818775:-1
position: 818775
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:818819:-1
position: 818819
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:816879-816932:-1:exon

position:816879:-1
position: 816879
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:816932:-1
position: 816932
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:816741-816794:-1:exon

position:816741:-1
position: 816741
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:816794:-1
position: 816794
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:816612-816665:-1:exon

position:816612:-1
position: 816612
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:816665:-1
position: 816665
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:816483-816536:-1:exon

position:816483:-1
position: 816483
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:816536:-1
position: 816536
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:816351-816404:-1:exon

position:816351:-1
position: 816351
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:816404:-1
position: 816404
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:815846-815890:-1:exon

position:815846:-1
position: 815846
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:815890:-1
position: 815890
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:815706-815759:-1:exon

position:815706:-1
position: 815706
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:815759:-1
position: 815759
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:815572-815616:-1:exon

position:815572:-1
position: 815572
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:815616:-1
position: 815616
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:814513-814566:-1:exon

position:814513:-1
position: 814513
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:814566:-1
position: 814566
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:814126-814224:-1:exon

position:814126:-1
position: 814126
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:814224:-1
position: 814224
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:813960-814004:-1:exon

position:813960:-1
position: 813960
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:814004:-1
position: 814004
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:813735-813833:-1:exon

position:813735:-1
position: 813735
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:813833:-1
position: 813833
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:813513-813566:-1:exon

position:813513:-1
position: 813513
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:813566:-1
position: 813566
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:813311-813418:-1:exon

position:813311:-1
position: 813311
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:813418:-1
position: 813418
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:812877-812930:-1:exon

position:812877:-1
position: 812877
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:812930:-1
position: 812930
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:812673-812771:-1:exon

position:812673:-1
position: 812673
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:812771:-1
position: 812771
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:812541-812594:-1:exon

position:812541:-1
position: 812541
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:812594:-1
position: 812594
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:812368-812466:-1:exon

position:812368:-1
position: 812368
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:812466:-1
position: 812466
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 26
SIO_000628: feature:812221-812274:-1:exon

position:812221:-1
position: 812221
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:812274:-1
position: 812274
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 27
SIO_000628: feature:812092-812145:-1:exon

position:812092:-1
position: 812092
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:812145:-1
position: 812145
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 28
SIO_000628: feature:811868-811975:-1:exon

position:811868:-1
position: 811868
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:811975:-1
position: 811975
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 29
SIO_000628: feature:811729-811773:-1:exon

position:811729:-1
position: 811729
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:811773:-1
position: 811773
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 30
SIO_000628: feature:811067-811165:-1:exon

position:811067:-1
position: 811067
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:811165:-1
position: 811165
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 31
SIO_000628: feature:810861-810968:-1:exon

position:810861:-1
position: 810861
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:810968:-1
position: 810968
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 32
SIO_000628: feature:810441-810602:-1:exon

position:810441:-1
position: 810441
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:810602:-1
position: 810602
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 33
SIO_000628: feature:810274-810327:-1:exon

position:810274:-1
position: 810274
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:810327:-1
position: 810327
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 34
SIO_000628: feature:810060-810167:-1:exon

position:810060:-1
position: 810060
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:810167:-1
position: 810167
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 35
SIO_000628: feature:809901-809954:-1:exon

position:809901:-1
position: 809901
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:809954:-1
position: 809954
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 36
SIO_000628: feature:809717-809770:-1:exon

position:809717:-1
position: 809717
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:809770:-1
position: 809770
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 37
SIO_000628: feature:809449-809610:-1:exon

position:809449:-1
position: 809449
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:809610:-1
position: 809610
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 38
SIO_000628: feature:809127-809234:-1:exon

position:809127:-1
position: 809127
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:809234:-1
position: 809234
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 39
SIO_000628: feature:808639-808746:-1:exon

position:808639:-1
position: 808639
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:808746:-1
position: 808746
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 40
SIO_000628: feature:808498-808551:-1:exon

position:808498:-1
position: 808498
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:808551:-1
position: 808551
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 41
SIO_000628: feature:808171-808278:-1:exon

position:808171:-1
position: 808171
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:808278:-1
position: 808278
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 42
SIO_000628: feature:808019-808072:-1:exon

position:808019:-1
position: 808019
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:808072:-1
position: 808072
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 43
SIO_000628: feature:807833-807940:-1:exon

position:807833:-1
position: 807833
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:807940:-1
position: 807940
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 44
SIO_000628: feature:807681-807734:-1:exon

position:807681:-1
position: 807681
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:807734:-1
position: 807734
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 45
SIO_000628: feature:807465-807572:-1:exon

position:807465:-1
position: 807465
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:807572:-1
position: 807572
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 46
SIO_000628: feature:807047-807326:-1:exon

position:807047:-1
position: 807047
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:807326:-1
position: 807326
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 47
SIO_000628: feature:806701-806891:-1:exon

position:806701:-1
position: 806701
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:806891:-1
position: 806891
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 48
SIO_000628: feature:806203-806445:-1:exon

position:806203:-1
position: 806203
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:806445:-1
position: 806445
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 49
SIO_000628: feature:805263-805979:-1:exon

position:805979:-1
position: 805979
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC119421425
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 451745
gene: LOC119421425
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: collagen alpha-1(I) chain
translation: MFSFVDLRRVLLLGAAVLLVRAQGEDDRTSTSCTLDGQVFADRDVWKPEPCQICVCDSGTVMCDDVHCDEPTDCPNPIVPHGECCAICPDDGYQAAEVEGPRGDRGPKGERGPPGPPGRDGLDGQPGLPGPPGPPGPPGLGGNFSPQMSGGYDEKSPSMLVPGPMGPMGPRGPPGPAGSSGPQGPTGPPGEPGEAGAPGPMGPRGPAGPSGKNGEDGEAGKSGRAGERGPPGAQGARGFPGTPGLPGIKGHRGFSGLDGAKGDTGPAGPKGEAGAPGENGTPGAMGPRGLPGERGRTGAPGSAGARGNDGAAGAAGPPGPTGPAGPPGFPGGPGSKGDVGPQGARGSEGPAGTRGEPGNPGPAGPAGPSGNPGTDGAPGAKGAPGAAGVAGAPGFPGPRGPPGPQGAAGAPGPKGNTGEVGAPGSKGEPGAKGEAGAPGVAGPPGPHGEEGKRGARGEPGAAGARGSPGERGAPGGRGFPGSDGPAGPKGATGERGAPGLVGPKGSTGEPGRTGEPGLPGAKGMTGSPGNPGPDGKTGSAGAPGQDGRPGPPGPVGARGQPGVMGFPGPKGAAGEAGKPGERGVMGPTGPAGAPGKDGDVGAQGPSGPAGPTGERGESGPAGAPGFQGLPGPQGAVGETGKPGEQGLPGEAGAPGPAGSRGDRGFPGERGAPGPIGPAGARGSPGAAGNEGAKGEAGAPGAPGAQGPPGLQGMPGERGAAGLPGLRGDRGDQGPKGGDGAPGKDGPRGLTGPIGLPGPAGAPGDKGESGGPGPVGPAGARGAPGERGEAGPPGPAGFAGPPGADGQPGTKGEPGDNGAKGDVGAPGPAGPTGAAGPQGPVGNTGSKGARGPAGPPGATGFPGAAGRVGPPGPAGNSGPPGPPGPSGKEGPKGNRGETGPAGRPGEVGAAGPPGLTGEKGSPGADGSPGSAGIPGPQGIAGQRGIVGLPGQRGERGFPGLPGPAGESGKPGPSGPGGERGPPGPMGPPGLAGAPGEPGREGTPGNEGAAGRDGAPGPKGDRGENGPAGAPGAPGPPGAPGPVGPAGKSGDRGETGPAGPAGPAGPAGPRGPAGPAGARGDKGETGEAGERGMKGHRGFTGAQGPPGPSGPSGEAGPAGSSGPAGPRGPSGSAGAPGKDGMSGLPGPTGPPGPRGRSGEMGPAGPPGPPGPAGPPGAPGGGFDLGFIAQPQEKAPDPFRMFRADDANVLRDRDLEVDSTLKSLSQQIEQIRSPDGTRKNPARTCRDLKMCHPDWKSGEYWIDPDQGCTQDAIKVYCNMETGETCVSPTQPEVAKKNWYMSKNIKEKKHVWFGDAMNNGFQFEYGSEGSLPEDVNIQMTFLRLMSTEASQNVTYHCKNSIAYMDATAGNLKKALLLQGSNEIEIRAEGNSRFTYSVLEDGCTSHTGTWGKTVIDYKTSKTSRLPIIDIAPMDVGAPDQEFGLEIGPVCFL
SIO_010081: LOC119421425
subclass of: SO_0000673
so part of: LOC119421425
location: complement(join(805833..805979,806203..806445,806701..806891,807047..807326,807465..807572,807681..807734,807833..807940,808019..808072,808171..808278,808498..808551,808639..808746,809127..809234,809449..809610,809717..809770,809901..809954,810060..810167,810274..810327,810441..810602,810861..810968,811067..811165,811729..811773,811868..811975,812092..812145,812221..812274,812368..812466,812541..812594,812673..812771,812877..812930,813311..813418,813513..813566,813735..813833,813960..814004,814126..814224,814513..814566,815572..815616,815706..815759,815846..815890,816351..816404,816483..816536,816612..816665,816741..816794,816879..816932,818775..818819,819128..819196,821042..821134,822020..822055,822267..822289,822367..822558,823922..824003))
location: region:805833-824003:-1
so has part: feature:823922-824003:-1:exon
so has part: feature:822367-822558:-1:exon
so has part: feature:822267-822289:-1:exon
so has part: feature:822020-822055:-1:exon
so has part: feature:821042-821134:-1:exon
so has part: feature:819128-819196:-1:exon
so has part: feature:818775-818819:-1:exon
so has part: feature:816879-816932:-1:exon
so has part: feature:816741-816794:-1:exon
so has part: feature:816612-816665:-1:exon
so has part: feature:816483-816536:-1:exon
so has part: feature:816351-816404:-1:exon
so has part: feature:815846-815890:-1:exon
so has part: feature:815706-815759:-1:exon
so has part: feature:815572-815616:-1:exon
so has part: feature:814513-814566:-1:exon
so has part: feature:814126-814224:-1:exon
so has part: feature:813960-814004:-1:exon
so has part: feature:813735-813833:-1:exon
so has part: feature:813513-813566:-1:exon
so has part: feature:813311-813418:-1:exon
so has part: feature:812877-812930:-1:exon
so has part: feature:812673-812771:-1:exon
so has part: feature:812541-812594:-1:exon
so has part: feature:812368-812466:-1:exon
so has part: feature:812221-812274:-1:exon
so has part: feature:812092-812145:-1:exon
so has part: feature:811868-811975:-1:exon
so has part: feature:811729-811773:-1:exon
so has part: feature:811067-811165:-1:exon
so has part: feature:810861-810968:-1:exon
so has part: feature:810441-810602:-1:exon
so has part: feature:810274-810327:-1:exon
so has part: feature:810060-810167:-1:exon
so has part: feature:809901-809954:-1:exon
so has part: feature:809717-809770:-1:exon
so has part: feature:809449-809610:-1:exon
so has part: feature:809127-809234:-1:exon
so has part: feature:808639-808746:-1:exon
so has part: feature:808498-808551:-1:exon
so has part: feature:808171-808278:-1:exon
so has part: feature:808019-808072:-1:exon
so has part: feature:807833-807940:-1:exon
so has part: feature:807681-807734:-1:exon
so has part: feature:807465-807572:-1:exon
so has part: feature:807047-807326:-1:exon
so has part: feature:806701-806891:-1:exon
so has part: feature:806203-806445:-1:exon
so has part: feature:805833-805979:-1:exon

XP_037544711.1
type: Protein
SIO_000068: ncbiprotein

position:805833:-1
position: 805833
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:824003:-1
position: 824003
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:823922-824003:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:822367-822558:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:822267-822289:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:822020-822055:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:821042-821134:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:819128-819196:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:818775-818819:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:816879-816932:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:816741-816794:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:816612-816665:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:816483-816536:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:816351-816404:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:815846-815890:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:815706-815759:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:815572-815616:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:814513-814566:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:814126-814224:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:813960-814004:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:813735-813833:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:813513-813566:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:813311-813418:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:812877-812930:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:812673-812771:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:812541-812594:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:812368-812466:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:812221-812274:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:812092-812145:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:811868-811975:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:811729-811773:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:811067-811165:-1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:810861-810968:-1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:810441-810602:-1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:810274-810327:-1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:810060-810167:-1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:809901-809954:-1:exon

urn:…
SIO_000300: 36
SIO_000628: feature:809717-809770:-1:exon

urn:…
SIO_000300: 37
SIO_000628: feature:809449-809610:-1:exon

urn:…
SIO_000300: 38
SIO_000628: feature:809127-809234:-1:exon

urn:…
SIO_000300: 39
SIO_000628: feature:808639-808746:-1:exon

urn:…
SIO_000300: 40
SIO_000628: feature:808498-808551:-1:exon

urn:…
SIO_000300: 41
SIO_000628: feature:808171-808278:-1:exon

urn:…
SIO_000300: 42
SIO_000628: feature:808019-808072:-1:exon

urn:…
SIO_000300: 43
SIO_000628: feature:807833-807940:-1:exon

urn:…
SIO_000300: 44
SIO_000628: feature:807681-807734:-1:exon

urn:…
SIO_000300: 45
SIO_000628: feature:807465-807572:-1:exon

urn:…
SIO_000300: 46
SIO_000628: feature:807047-807326:-1:exon

urn:…
SIO_000300: 47
SIO_000628: feature:806701-806891:-1:exon

urn:…
SIO_000300: 48
SIO_000628: feature:806203-806445:-1:exon

urn:…
SIO_000300: 49
SIO_000628: feature:805833-805979:-1:exon

LOC119422001
type: Gene
subclass of: SO_0000704
RO_0002162: 451745
gene: LOC119422001
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1278489..1280489)
location: region:1278489-1280489:-1
so has part: feature:1278489-1280489:-1:exon
subclass of: SO_0000010

119422001
type: Gene
SIO_000068: ncbigene

position:1278489:-1
position: 1278489
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1280489:-1
position: 1280489
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1278489-1280489:-1:exon

LOC119422001
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 451745
gene: LOC119422001
product: uncharacterized LOC119422001
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_037689350.1
SIO_010081: LOC119422001
subclass of: SO_0000673
so part of: LOC119422001
location: complement(join(1278489..1279362,1280111..1280489))
location: region:1278489-1280489:-1
so has part: feature:1280111-1280489:-1:exon
so has part: feature:1278489-1279362:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1280111-1280489:-1:exon

position:1280111:-1
position: 1280111
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1278489-1279362:-1:exon

position:1279362:-1
position: 1279362
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC119422001
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 451745
gene: LOC119422001
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC119422001
translation: MPRKEDRKRAWLAALKLKYPPKRVYVCSFHFIDKKPTELHPDPELYLGYDRAPPKKRRQLIRTTVSQTASSNIDKTAESVPECTVDSPSVIPDLASVSTQPPGPHLHSVHTQWEDPSLKDHHQYCNTSGRKDVQDKTTQCDEVAFFLLQNDADALLYTGIALETFHTLVSALEGDDNNEFTMPVQDQVLITLMKIKTNRVMGDLSRQFNISQSMASKIISYWLDRLEEYFRPLIPWLAKETIQATMPAAFKKNFPNTTCIIDCSESLLQKPKNLGSRGESYSHYYSHNTVKYLVAVAPCGLIMFVSAAYGGRCSDKFITMDSGILNYLKPGDEVMADRGFTIKELLFERKVRLVIPAFTKKKGTAN
SIO_010081: LOC119422001
subclass of: SO_0000673
so part of: LOC119422001
location: complement(join(1278506..1279362,1280111..1280354))
location: region:1278506-1280354:-1
so has part: feature:1280111-1280354:-1:exon
so has part: feature:1278506-1279362:-1:exon

XP_037545278.1
type: Protein
SIO_000068: ncbiprotein

position:1278506:-1
position: 1278506
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1280354:-1
position: 1280354
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1280111-1280354:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1278506-1279362:-1:exon

LOC119421426
type: Gene
subclass of: SO_0000704
RO_0002162: 451745
gene: LOC119421426
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1282885..>1298170
location: region:1282885-1298170:1
so has part: feature:1282885-1298170:1:exon
subclass of: SO_0000010

119421426
type: Gene
SIO_000068: ncbigene

position:1282885:1
position: 1282885
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1298170:1
position: 1298170
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1282885-1298170:1:exon

LOC119421426
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 451745
gene: LOC119421426
product: COP9 signalosome complex subunit 1
inference: similar to RNA sequence (same species):INSD:GELZ01022020.1
exception: annotated by transcript or proteomic data
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: added 213 bases not found in genome assembly; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 99% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_037688784.1
SIO_010081: LOC119421426
subclass of: SO_0000673
so part of: LOC119421426
location: join(1282885..1283060,1298078..>1298170)
location: region:1282885-1298170:1
so has part: feature:1282885-1283060:1:exon
so has part: feature:1298078-1298170:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1282885-1283060:1:exon

position:1283060:1
position: 1283060
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1298078-1298170:1:exon

position:1298078:1
position: 1298078
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC119421426
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 451745
gene: LOC119421426
inference: similar to RNA sequence (same species):INSD:GELZ01022020.1
exception: annotated by transcript or proteomic data
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: added 204 bases not found in genome assembly; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: COP9 signalosome complex subunit 1
translation: MPLPVQVFNFQGSVEPMQIDADPQEDQQNAPDINYIVENPTLDLEQYATSYSGLMRIERLQFIAEHCPQLRVEALKMALTFIQRTFNVDMYEEIHRKLTDATRYIIINR
SIO_010081: LOC119421426
subclass of: SO_0000673
so part of: LOC119421426
location: join(1283028..1283060,1298078..>1298170)
location: region:1283028-1298170:1
so has part: feature:1283028-1283060:1:exon
so has part: feature:1298078-1298170:1:exon

XP_037544712.1
type: Protein
SIO_000068: ncbiprotein

position:1283028:1
position: 1283028
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1283028-1283060:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1298078-1298170:1:exon

LOC119421928
type: Gene
subclass of: SO_0000704
RO_0002162: 451745
gene: LOC119421928
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1337818..1454677
location: region:1337818-1454677:1
so has part: feature:1337818-1454677:1:exon
subclass of: SO_0000010

119421928
type: Gene
SIO_000068: ncbigene

position:1337818:1
position: 1337818
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1454677:1
position: 1454677
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1337818-1454677:1:exon

LOC119421928
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 451745
gene: LOC119421928
product: COP9 signalosome complex subunit 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 99% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_037689292.1
SIO_010081: LOC119421928
subclass of: SO_0000673
so part of: LOC119421928
location: join(1337818..1338002,1351245..1351380,1352142..1352219,1352298..1352358,1353831..1353916,1354052..1354146,1354229..1354334,1386145..1386225,1443471..1443608,1443689..1443823,1454379..1454677)
location: region:1337818-1454677:1
so has part: feature:1337818-1338002:1:exon
so has part: feature:1351245-1351380:1:exon
so has part: feature:1352142-1352219:1:exon
so has part: feature:1352298-1352358:1:exon
so has part: feature:1353831-1353916:1:exon
so has part: feature:1354052-1354146:1:exon
so has part: feature:1354229-1354334:1:exon
so has part: feature:1386145-1386225:1:exon
so has part: feature:1443471-1443608:1:exon
so has part: feature:1443689-1443823:1:exon
so has part: feature:1454379-1454677:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1337818-1338002:1:exon

position:1338002:1
position: 1338002
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1351245-1351380:1:exon

position:1351245:1
position: 1351245
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1351380:1
position: 1351380
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1352142-1352219:1:exon

position:1352142:1
position: 1352142
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1352219:1
position: 1352219
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1352298-1352358:1:exon

position:1352298:1
position: 1352298
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1352358:1
position: 1352358
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1353831-1353916:1:exon

position:1353831:1
position: 1353831
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1353916:1
position: 1353916
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1354052-1354146:1:exon

position:1354052:1
position: 1354052
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1354146:1
position: 1354146
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1354229-1354334:1:exon

position:1354229:1
position: 1354229
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1354334:1
position: 1354334
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1386145-1386225:1:exon

position:1386145:1
position: 1386145
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1386225:1
position: 1386225
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1443471-1443608:1:exon

position:1443471:1
position: 1443471
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1443608:1
position: 1443608
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1443689-1443823:1:exon

position:1443689:1
position: 1443689
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1443823:1
position: 1443823
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1454379-1454677:1:exon

position:1454379:1
position: 1454379
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC119421928
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 451745
gene: LOC119421928
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: COP9 signalosome complex subunit 1
translation: MFFPTCREVQSASDAVPEGSVVSPPLDSAWAESTRKKALLKLEKLDTDLKNYKGNSIKESIRRGHDDLGDHYLDCGDLSNALKCYSRARDYCTSAKHVINMCLNVIKVSVYLQNWSHVLSYVNKAESTPEIAEQRGERDSQNQTVLTKLKCAAGLAELASRKYKPAAKCFLQASFDHCDCPELLSPSNVAVYGGLCALATFDRQELQRNVISSSSFKLFLELEPQIRDIIFKFYESKYASCLKLLDEMKDNLLLDMYLAPHIKTLYSQIRNRALIQYFSPYVSADMTKMAQAFNTTVSALEDELTQLILEGLVNARIDSHSKILYARDVDQRSTTFEKSLHMGKEFQRRAKAMILRAAVLRNQIHVKSPPREGSQGELTPANSQTRMSTNM
SIO_010081: LOC119421928
subclass of: SO_0000673
so part of: LOC119421928
location: join(1337818..1338002,1351245..1351380,1352142..1352219,1352298..1352358,1353831..1353916,1354052..1354146,1354229..1354334,1386145..1386225,1443471..1443608,1443689..1443823,1454379..1454453)
location: region:1337818-1454453:1
so has part: feature:1337818-1338002:1:exon
so has part: feature:1351245-1351380:1:exon
so has part: feature:1352142-1352219:1:exon
so has part: feature:1352298-1352358:1:exon
so has part: feature:1353831-1353916:1:exon
so has part: feature:1354052-1354146:1:exon
so has part: feature:1354229-1354334:1:exon
so has part: feature:1386145-1386225:1:exon
so has part: feature:1443471-1443608:1:exon
so has part: feature:1443689-1443823:1:exon
so has part: feature:1454379-1454453:1:exon

XP_037545220.1
type: Protein
SIO_000068: ncbiprotein

position:1454453:1
position: 1454453
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1337818-1338002:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1351245-1351380:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1352142-1352219:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1352298-1352358:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1353831-1353916:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1354052-1354146:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1354229-1354334:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1386145-1386225:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1443471-1443608:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1443689-1443823:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1454379-1454453:1:exon

LOC119422002
type: Gene
subclass of: SO_0000704
RO_0002162: 451745
gene: LOC119422002
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1493867..1496411
location: region:1493867-1496411:1
so has part: feature:1493867-1496411:1:exon
subclass of: SO_0000010

119422002
type: Gene
SIO_000068: ncbigene

position:1493867:1
position: 1493867
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1496411:1
position: 1496411
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1493867-1496411:1:exon

LOC119422002
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 451745
gene: LOC119422002
product: uncharacterized LOC119422002
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_037689351.1
SIO_010081: LOC119422002
subclass of: SO_0000673
so part of: LOC119422002
location: join(1493867..1494301,1495050..1496411)
location: region:1493867-1496411:1
so has part: feature:1493867-1494301:1:exon
so has part: feature:1495050-1496411:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1493867-1494301:1:exon

position:1494301:1
position: 1494301
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1495050-1496411:1:exon

position:1495050:1
position: 1495050
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC119422002
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 451745
gene: LOC119422002
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC119422002
translation: MSLGSTCAVVGCHNSSRKLKDELETYCFAHQQLRKACVCPARYELHSMPRKEDRKRAWLAALKLKYPPKRVYVCSFHFIDKKPTELHPDPELYLGYDRAPPKKRRQLIRTTVSQTASSNIDKTAESVPECTVDSPSVIPDLASVSTQPPGPHLHSVHTQWEDPSLKDHHQYCNTSGRKDVQDKTTQCDEVAFFLLQNDADALLYTGIALETFNTLVSALEGDDNNEFTMPVQDQVLITLMKIKTNRVMGDLSRQFNISQSMASKIISYWLDRLEEYFRPLIPWLAKETIQATMPAAFKKNFPNTTCIIDCSESLLQKPKNLGSRGESYSHYYSHNTVKYLVAVAPCGLIMFVSAAYGGRCSDKFITMDSGILNYLKPGDEVMADRGFTIKELLFERKVRLVIPAFTKKKGQLTEEQVTCTRRIANVRIHVERAIRRLKVYKILSQTVPINMAPKIDKILRICAALVNLRKDLIRDTE
SIO_010081: LOC119422002
subclass of: SO_0000673
so part of: LOC119422002
location: join(1493917..1494301,1495050..1496098)
location: region:1493917-1496098:1
so has part: feature:1493917-1494301:1:exon
so has part: feature:1495050-1496098:1:exon

XP_037545279.1
type: Protein
SIO_000068: ncbiprotein

position:1493917:1
position: 1493917
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1496098:1
position: 1496098
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1493917-1494301:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1495050-1496098:1:exon

LOC119421929
type: Gene
subclass of: SO_0000704
RO_0002162: 451745
gene: LOC119421929
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1546329..1550152
location: region:1546329-1550152:1
so has part: feature:1546329-1550152:1:exon
subclass of: SO_0000010

119421929
type: Gene
SIO_000068: ncbigene

position:1546329:1
position: 1546329
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1550152:1
position: 1550152
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1546329-1550152:1:exon

LOC119421929
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 451745
gene: LOC119421929
product: uncharacterized LOC119421929
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 71% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_037689293.1
SIO_010081: LOC119421929
subclass of: SO_0000673
so part of: LOC119421929
location: join(1546329..1546562,1546744..1547001,1549983..1550152)
location: region:1546329-1550152:1
so has part: feature:1546329-1546562:1:exon
so has part: feature:1546744-1547001:1:exon
so has part: feature:1549983-1550152:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1546329-1546562:1:exon

position:1546562:1
position: 1546562
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1546744-1547001:1:exon

position:1546744:1
position: 1546744
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1547001:1
position: 1547001
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1549983-1550152:1:exon

position:1549983:1
position: 1549983
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC119421929
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 451745
gene: LOC119421929
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC119421929
translation: MAQAVELKFKIHLYHKLATALSPSLRSFLRKTLSGQEYEEVINTLAALTETAGTEERARSLEKKQGPPREAVPSPTEVHDFFSFCVEKQQQEWDSGGISESWGRQFVVQYMSDSKLTGFQSLLNFWHERSDGLVPVAKRLLAIPATSIPSERGVRFLGCPERGSGGSNMCCRIMAFSKHITRFYRDNVATPHLLGQGLLQGSYGPPQ
SIO_010081: LOC119421929
subclass of: SO_0000673
so part of: LOC119421929
location: join(1546367..1546562,1546744..1547001,1549983..1550152)
location: region:1546367-1550152:1
so has part: feature:1546367-1546562:1:exon
so has part: feature:1546744-1547001:1:exon
so has part: feature:1549983-1550152:1:exon

XP_037545221.1
type: Protein
SIO_000068: ncbiprotein

position:1546367:1
position: 1546367
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1546367-1546562:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1546744-1547001:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1549983-1550152:1:exon

LOC119421930
type: Gene
subclass of: SO_0000704
RO_0002162: 451745
gene: LOC119421930
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1578252..1702116
location: region:1578252-1702116:1
so has part: feature:1578252-1702116:1:exon
subclass of: SO_0000010

119421930
type: Gene
SIO_000068: ncbigene

position:1578252:1
position: 1578252
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1702116:1
position: 1702116
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1578252-1702116:1:exon

LOC119421930
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 451745
gene: LOC119421930
product: next to BRCA1 gene 1 protein
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 92% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_037689294.1
SIO_010081: LOC119421930
subclass of: SO_0000673
so part of: LOC119421930
location: join(1578252..1578274,1580857..1580949,1651046..1651247,1701581..1701666,1701917..1701995,1702107..1702116)
location: region:1578252-1702116:1
so has part: feature:1578252-1578274:1:exon
so has part: feature:1580857-1580949:1:exon
so has part: feature:1651046-1651247:1:exon
so has part: feature:1701581-1701666:1:exon
so has part: feature:1701917-1701995:1:exon
so has part: feature:1702107-1702116:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1578252-1578274:1:exon

position:1578274:1
position: 1578274
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1580857-1580949:1:exon

position:1580857:1
position: 1580857
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1580949:1
position: 1580949
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1651046-1651247:1:exon

position:1651046:1
position: 1651046
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1651247:1
position: 1651247
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1701581-1701666:1:exon

position:1701581:1
position: 1701581
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1701666:1
position: 1701666
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1701917-1701995:1:exon

position:1701917:1
position: 1701917
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1701995:1
position: 1701995
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1702107-1702116:1:exon

position:1702107:1
position: 1702107
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC119421930
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 451745
gene: LOC119421930
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: next to BRCA1 gene 1 protein
translation: MSPRTQNKDNKFVGLIQKEIDVNYSILENVDQSCIQRSSEPKVNETKKEPEKEEGGEAQTGRRRSCSSSSSSEDYIIILPDCFDTSRPLGDSMYSQGSFTEEDVNAPKAREGMGGPELYHPGGIHYLEQTQTHDAEGTKDTMDDNIRDPRLQ
SIO_010081: LOC119421930
subclass of: SO_0000673
so part of: LOC119421930
location: join(1580868..1580949,1651046..1651247,1701581..1701666,1701917..1701995,1702107..1702116)
location: region:1580868-1702116:1
so has part: feature:1580868-1580949:1:exon
so has part: feature:1651046-1651247:1:exon
so has part: feature:1701581-1701666:1:exon
so has part: feature:1701917-1701995:1:exon
so has part: feature:1702107-1702116:1:exon

XP_037545222.1
type: Protein
SIO_000068: ncbiprotein

position:1580868:1
position: 1580868
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1580868-1580949:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1651046-1651247:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1701581-1701666:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1701917-1701995:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1702107-1702116:1:exon

LOC119421932
type: Gene
subclass of: SO_0000704
RO_0002162: 451745
gene: LOC119421932
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1934327..1935688
location: region:1934327-1935688:1
so has part: feature:1934327-1935688:1:exon
subclass of: SO_0000010

119421932
type: Gene
SIO_000068: ncbigene

position:1934327:1
position: 1934327
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1935688:1
position: 1935688
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1934327-1935688:1:exon

LOC119421932
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 451745
gene: LOC119421932
product: oxysterol-binding protein-related protein 6-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 92% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_037689295.1
SIO_010081: LOC119421932
subclass of: SO_0000673
so part of: LOC119421932
location: join(1934327..1934484,1935540..1935688)
location: region:1934327-1935688:1
so has part: feature:1934327-1934484:1:exon
so has part: feature:1935540-1935688:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1934327-1934484:1:exon

position:1934484:1
position: 1934484
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1935540-1935688:1:exon

position:1935540:1
position: 1935540
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC119421932
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 451745
gene: LOC119421932
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: oxysterol-binding protein-related protein 6-like
translation: MSTNNLTTSVQSIPDYVYSQLSNPQATSPETKKLHQDICSLSQRVHTSLKSIHEVLTLERERLKQAWAGPDLRQNTSQQFATLCTTMSEVTHK
SIO_010081: LOC119421932
subclass of: SO_0000673
so part of: LOC119421932
location: join(1934352..1934484,1935540..1935688)
location: region:1934352-1935688:1
so has part: feature:1934352-1934484:1:exon
so has part: feature:1935540-1935688:1:exon

XP_037545223.1
type: Protein
SIO_000068: ncbiprotein

position:1934352:1
position: 1934352
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1934352-1934484:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1935540-1935688:1:exon

LOC119421933
type: Gene
subclass of: SO_0000704
RO_0002162: 451745
gene: LOC119421933
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1984273..1994013)
location: region:1984273-1994013:-1
so has part: feature:1984273-1994013:-1:exon
subclass of: SO_0000010

119421933
type: Gene
SIO_000068: ncbigene

position:1984273:-1
position: 1984273
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1994013:-1
position: 1994013
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1984273-1994013:-1:exon

LOC119421933
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 451745
gene: LOC119421933
product: oxysterol-binding protein-related protein 6-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_037689296.1
SIO_010081: LOC119421933
subclass of: SO_0000673
so part of: LOC119421933
location: complement(join(1984273..1984355,1984440..1984503,1984572..1984709,1984804..1985018,1985374..1985448,1985727..1985907,1993943..1994013))
location: region:1984273-1994013:-1
so has part: feature:1993943-1994013:-1:exon
so has part: feature:1985727-1985907:-1:exon
so has part: feature:1985374-1985448:-1:exon
so has part: feature:1984804-1985018:-1:exon
so has part: feature:1984572-1984709:-1:exon
so has part: feature:1984440-1984503:-1:exon
so has part: feature:1984273-1984355:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1993943-1994013:-1:exon

position:1993943:-1
position: 1993943
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1985727-1985907:-1:exon

position:1985727:-1
position: 1985727
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1985907:-1
position: 1985907
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1985374-1985448:-1:exon

position:1985374:-1
position: 1985374
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1985448:-1
position: 1985448
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1984804-1985018:-1:exon

position:1984804:-1
position: 1984804
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1985018:-1
position: 1985018
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1984572-1984709:-1:exon

position:1984572:-1
position: 1984572
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1984709:-1
position: 1984709
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1984440-1984503:-1:exon

position:1984440:-1
position: 1984440
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1984503:-1
position: 1984503
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1984273-1984355:-1:exon

position:1984355:-1
position: 1984355
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC119421933
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 451745
gene: LOC119421933
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: oxysterol-binding protein-related protein 6-like
translation: MGRHSHRAPSVAESMAEYFDASEVIICETSSEAEASDESGLSDVTTTSNSEPEEGHSSTTLSYRASLKSSTDKPNLVPKDTGRRTALPAPGADNSHIGIMTILYNNIGKDLSRVSMPVALNEPLSLLQRLSEELEYPELLDIASNTDDPFERMVYVAAFSISGYAWASWRYRYKPFNPILGETYENHREDRGFHYISEQVCHHPPISACHAESENFTFWQDQRWKNKFWGKSVEIISSGLVNVTLPR
SIO_010081: LOC119421933
subclass of: SO_0000673
so part of: LOC119421933
location: complement(join(1984273..1984355,1984440..1984503,1984572..1984709,1984804..1985018,1985374..1985448,1985727..1985895))
location: region:1984273-1985895:-1
so has part: feature:1985727-1985895:-1:exon
so has part: feature:1985374-1985448:-1:exon
so has part: feature:1984804-1985018:-1:exon
so has part: feature:1984572-1984709:-1:exon
so has part: feature:1984440-1984503:-1:exon
so has part: feature:1984273-1984355:-1:exon

XP_037545224.1
type: Protein
SIO_000068: ncbiprotein

position:1985895:-1
position: 1985895
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1985727-1985895:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1985374-1985448:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1984804-1985018:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1984572-1984709:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1984440-1984503:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1984273-1984355:-1:exon

LOC119421934
type: Gene
subclass of: SO_0000704
RO_0002162: 451745
gene: LOC119421934
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2010747..2012472
location: region:2010747-2012472:1
so has part: feature:2010747-2012472:1:exon
subclass of: SO_0000010

119421934
type: Gene
SIO_000068: ncbigene

position:2010747:1
position: 2010747
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2012472:1
position: 2012472
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2010747-2012472:1:exon

LOC119421934
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 451745
gene: LOC119421934
product: oxysterol-binding protein-related protein 6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 96% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_037689297.1
SIO_010081: LOC119421934
subclass of: SO_0000673
so part of: LOC119421934
location: join(2010747..2010751,2011601..2011745,2011843..2011993,2012145..2012271,2012344..2012472)
location: region:2010747-2012472:1
so has part: feature:2010747-2010751:1:exon
so has part: feature:2011601-2011745:1:exon
so has part: feature:2011843-2011993:1:exon
so has part: feature:2012145-2012271:1:exon
so has part: feature:2012344-2012472:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2010747-2010751:1:exon

position:2010751:1
position: 2010751
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2011601-2011745:1:exon

position:2011601:1
position: 2011601
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2011745:1
position: 2011745
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2011843-2011993:1:exon

position:2011843:1
position: 2011843
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2011993:1
position: 2011993
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2012145-2012271:1:exon

position:2012145:1
position: 2012145
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2012271:1
position: 2012271
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2012344-2012472:1:exon

position:2012344:1
position: 2012344
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC119421934
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 451745
gene: LOC119421934
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: oxysterol-binding protein-related protein 6
translation: MRYGDHYEWNKAVTCIHNVLSQQRWLEHYGEVVIRNTKSDECTCKITFVKSRYWSSDSSKNEVQGVVLNRAGEVIHRFGGLWHEGIFCDTLPTPKCIWKPNVQPDDYAQFYGFSHYARELNELTPDLIGVLPPTDTRFRPDQRLLEEGKVEEADKKKDEVEEKQRDRRKEMAKKGEEHIPRFFK
SIO_010081: LOC119421934
subclass of: SO_0000673
so part of: LOC119421934
location: join(2010747..2010751,2011601..2011745,2011843..2011993,2012145..2012271,2012344..2012470)
location: region:2010747-2012470:1
so has part: feature:2010747-2010751:1:exon
so has part: feature:2011601-2011745:1:exon
so has part: feature:2011843-2011993:1:exon
so has part: feature:2012145-2012271:1:exon
so has part: feature:2012344-2012470:1:exon

XP_037545225.1
type: Protein
SIO_000068: ncbiprotein

position:2012470:1
position: 2012470
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2010747-2010751:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2011601-2011745:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2011843-2011993:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2012145-2012271:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2012344-2012470:1:exon

LOC119421935
type: Gene
subclass of: SO_0000704
RO_0002162: 451745
gene: LOC119421935
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2086995..>2151307)
location: region:2086995-2151307:-1
so has part: feature:2086995-2151307:-1:exon
subclass of: SO_0000010

119421935
type: Gene
SIO_000068: ncbigene

position:2086995:-1
position: 2086995
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2151307:-1
position: 2151307
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2086995-2151307:-1:exon

LOC119421935
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 451745
gene: LOC119421935
product: next to BRCA1 gene 1 protein
inference: similar to RNA sequence (same species):INSD:GELZ01013536.1
exception: annotated by transcript or proteomic data
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: added 116 bases not found in genome assembly; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 70% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_037689298.1
SIO_010081: LOC119421935
subclass of: SO_0000673
so part of: LOC119421935
location: complement(join(2086995..2087205,2151182..>2151307))
location: region:2086995-2151307:-1
so has part: feature:2151182-2151307:-1:exon
so has part: feature:2086995-2087205:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2151182-2151307:-1:exon

position:2151182:-1
position: 2151182
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2086995-2087205:-1:exon

position:2087205:-1
position: 2087205
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC119421935
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 451745
gene: LOC119421935
inference: similar to RNA sequence (same species):INSD:GELZ01013536.1
exception: annotated by transcript or proteomic data
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: added 95 bases not found in genome assembly; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 2
product: next to BRCA1 gene 1 protein
translation: MSSSTLPGVPTSFTPSCSSCKGQTTGGGYQCSVCTSCTLCEPCSFSHDPSHNLMRARTPLSIPEHGSPAPDQNRLYRRGDHSFRKAEKQRLKAEKRLLKAEVKEIRKQLRMERRSIHWSSSQTDGSSSPVLLQPQATQHNSPK
SIO_010081: LOC119421935
subclass of: SO_0000673
so part of: LOC119421935
location: complement(join(2086995..2087205,2151182..>2151307))
location: region:2086995-2151307:-1
so has part: feature:2151182-2151307:-1:exon
so has part: feature:2086995-2087205:-1:exon

XP_037545226.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2151182-2151307:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2086995-2087205:-1:exon

LOC119422003
type: Gene
subclass of: SO_0000704
RO_0002162: 451745
gene: LOC119422003
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2252890..2254460)
location: region:2252890-2254460:-1
so has part: feature:2252890-2254460:-1:exon
subclass of: SO_0000011

119422003
type: Gene
SIO_000068: ncbigene

position:2252890:-1
position: 2252890
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2254460:-1
position: 2254460
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2252890-2254460:-1:exon

LOC119422003
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 451745
nc RNA class: lncRNA
gene: LOC119422003
product: uncharacterized LOC119422003
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XR_005187386.1
SIO_010081: LOC119422003
subclass of: SO_0000673
so part of: LOC119422003
location: complement(join(2252890..2253103,2253181..2253278,2253651..2253743,2254269..2254460))
location: region:2252890-2254460:-1
so has part: feature:2254269-2254460:-1:exon
so has part: feature:2253651-2253743:-1:exon
so has part: feature:2253181-2253278:-1:exon
so has part: feature:2252890-2253103:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2254269-2254460:-1:exon

position:2254269:-1
position: 2254269
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2253651-2253743:-1:exon

position:2253651:-1
position: 2253651
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2253743:-1
position: 2253743
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2253181-2253278:-1:exon

position:2253181:-1
position: 2253181
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2253278:-1
position: 2253278
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2252890-2253103:-1:exon

position:2253103:-1
position: 2253103
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC119422004
type: Gene
subclass of: SO_0000704
RO_0002162: 451745
gene: LOC119422004
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2311090..2365433
location: region:2311090-2365433:1
so has part: feature:2311090-2365433:1:exon
subclass of: SO_0000011

119422004
type: Gene
SIO_000068: ncbigene

position:2311090:1
position: 2311090
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2365433:1
position: 2365433
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2311090-2365433:1:exon

LOC119422004
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 451745
nc RNA class: lncRNA
gene: LOC119422004
product: uncharacterized LOC119422004
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XR_005187387.1
SIO_010081: LOC119422004
subclass of: SO_0000673
so part of: LOC119422004
location: join(2311090..2311203,2349216..2349402,2365230..2365433)
location: region:2311090-2365433:1
so has part: feature:2311090-2311203:1:exon
so has part: feature:2349216-2349402:1:exon
so has part: feature:2365230-2365433:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2311090-2311203:1:exon

position:2311203:1
position: 2311203
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2349216-2349402:1:exon

position:2349216:1
position: 2349216
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2349402:1
position: 2349402
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2365230-2365433:1:exon

position:2365230:1
position: 2365230
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC119422005
type: Gene
subclass of: SO_0000704
RO_0002162: 451745
gene: LOC119422005
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2365433..2415055
location: region:2365433-2415055:1
so has part: feature:2365433-2415055:1:exon
subclass of: SO_0000011

119422005
type: Gene
SIO_000068: ncbigene

position:2415055:1
position: 2415055
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2365433-2415055:1:exon

LOC119422005
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 451745
nc RNA class: lncRNA
gene: LOC119422005
product: uncharacterized LOC119422005
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XR_005187388.1
SIO_010081: LOC119422005
subclass of: SO_0000673
so part of: LOC119422005
location: join(2365433..2365461,2377427..2377531,2415012..2415055)
location: region:2365433-2415055:1
so has part: feature:2365433-2365461:1:exon
so has part: feature:2377427-2377531:1:exon
so has part: feature:2415012-2415055:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2365433-2365461:1:exon

position:2365461:1
position: 2365461
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2377427-2377531:1:exon

position:2377427:1
position: 2377427
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2377531:1
position: 2377531
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2415012-2415055:1:exon

position:2415012:1
position: 2415012
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC119421936
type: Gene
subclass of: SO_0000704
RO_0002162: 451745
gene: LOC119421936
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: <2609384..2627752
location: region:2609384-2627752:1
so has part: feature:2609384-2627752:1:exon
subclass of: SO_0000010

119421936
type: Gene
SIO_000068: ncbigene

position:2609384:1
position: 2609384
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

position:2627752:1
position: 2627752
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2609384-2627752:1:exon

LOC119421936
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 451745
gene: LOC119421936
product: next to BRCA1 gene 1 protein
inference: similar to RNA sequence (same species):INSD:GELZ01013535.1
exception: annotated by transcript or proteomic data
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: added 177 bases not found in genome assembly; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 82% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_037689299.1
SIO_010081: LOC119421936
subclass of: SO_0000673
so part of: LOC119421936
location: join(<2609384..2609446,2609564..2609582,2609661..2609683,2609838..2610026,2627654..2627752)
location: region:2609384-2627752:1
so has part: feature:2609384-2609446:1:exon
so has part: feature:2609564-2609582:1:exon
so has part: feature:2609661-2609683:1:exon
so has part: feature:2609838-2610026:1:exon
so has part: feature:2627654-2627752:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2609384-2609446:1:exon

position:2609446:1
position: 2609446
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2609564-2609582:1:exon

position:2609564:1
position: 2609564
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2609582:1
position: 2609582
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2609661-2609683:1:exon

position:2609661:1
position: 2609661
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2609683:1
position: 2609683
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2609838-2610026:1:exon

position:2609838:1
position: 2609838
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2610026:1
position: 2610026
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2627654-2627752:1:exon

position:2627654:1
position: 2627654
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC119421936
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 451745
gene: LOC119421936
inference: similar to RNA sequence (same species):INSD:GELZ01013535.1
exception: annotated by transcript or proteomic data
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: added 102 bases not found in genome assembly; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: next to BRCA1 gene 1 protein
translation: MDLHVNVKINFRGNYRNFLLVGTDLKSWESMEAMVRRSFGLSSLQLTYFDEENEEISINSQGEYEEALKSAAKQGNHLNMNMCETRGHPARLLSTKVSGAEPKRGFRATQHCPTLTQAISRKVQAVVTEPSMIIMKEVKGTKEEDKIPPAWFTSYMEKVLELEL
SIO_010081: LOC119421936
subclass of: SO_0000673
so part of: LOC119421936
location: join(<2609384..2609446,2609564..2609582,2609661..2609683,2609838..2610026,2627654..2627752)
location: region:2609384-2627752:1
so has part: feature:2609384-2609446:1:exon
so has part: feature:2609564-2609582:1:exon
so has part: feature:2609661-2609683:1:exon
so has part: feature:2609838-2610026:1:exon
so has part: feature:2627654-2627752:1:exon

XP_037545227.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2609384-2609446:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2609564-2609582:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2609661-2609683:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2609838-2610026:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2627654-2627752:1:exon

LOC119422007
type: Gene
subclass of: SO_0000704
RO_0002162: 451745
gene: LOC119422007
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2805886..2851473
location: region:2805886-2851473:1
so has part: feature:2805886-2851473:1:exon
subclass of: SO_0000010

119422007
type: Gene
SIO_000068: ncbigene

position:2805886:1
position: 2805886
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2851473:1
position: 2851473
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2805886-2851473:1:exon

LOC119422007
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 451745
gene: LOC119422007
product: nitric oxide synthase interacting protein
inference: similar to RNA sequence (same species):INSD:GELZ01030742.1
exception: annotated by transcript or proteomic data
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: added 117 bases not found in genome assembly; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 14 Proteins, and 97% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_037689352.1
SIO_010081: LOC119422007
subclass of: SO_0000673
so part of: LOC119422007
location: join(2805886..2806332,2808389..2808494,2824373..2824454,2827158..2827293,2827405..>2827556,<2834021..2834091,2834174..2834282,2851215..2851473)
location: region:2805886-2851473:1
so has part: feature:2805886-2806332:1:exon
so has part: feature:2808389-2808494:1:exon
so has part: feature:2824373-2824454:1:exon
so has part: feature:2827158-2827293:1:exon
so has part: feature:2827405-2827556:1:exon
so has part: feature:2834021-2834091:1:exon
so has part: feature:2834174-2834282:1:exon
so has part: feature:2851215-2851473:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2805886-2806332:1:exon

position:2806332:1
position: 2806332
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2808389-2808494:1:exon

position:2808389:1
position: 2808389
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2808494:1
position: 2808494
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2824373-2824454:1:exon

position:2824373:1
position: 2824373
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2824454:1
position: 2824454
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2827158-2827293:1:exon

position:2827158:1
position: 2827158
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2827293:1
position: 2827293
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2827405-2827556:1:exon

position:2827405:1
position: 2827405
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2827556:1
position: 2827556
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2834021-2834091:1:exon

position:2834021:1
position: 2834021
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

position:2834091:1
position: 2834091
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:2834174-2834282:1:exon

position:2834174:1
position: 2834174
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2834282:1
position: 2834282
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:2851215-2851473:1:exon

position:2851215:1
position: 2851215
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC119422007
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 451745
gene: LOC119422007
inference: similar to RNA sequence (same species):INSD:GELZ01030742.1
exception: annotated by transcript or proteomic data
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: added 117 bases not found in genome assembly; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: nitric oxide synthase-interacting protein
translation: MTRHGKNCTAGAVYTYHEKKKDTAASGYGTQSVRLGKDAIKDFDCCSLSLQPCQDPVVTPDGYLYEKQAILEYILHQKREIAKKMKAYETQKKALKNNNQLESKSEERQKAERFKTSENNIVSKPINPFASGQNKDNEVGGSQNSSGESSTAAAATSSSQSLPSFWVPSLTPEAKPTLLKKPSKTVLCPMSGRPIKMSDLIPVRFTPLDPSLDRVALLNRQERYVCAVTRDALGNSVPSAVLKPSGAVVTQECVEKLIKKDMVDPVTEDKLRDGDIIPLQRGGTGFSASGVELRARESRPVMQA
SIO_010081: LOC119422007
subclass of: SO_0000673
so part of: LOC119422007
location: join(2806263..2806332,2808389..2808494,2824373..2824454,2827158..2827293,2827405..>2827556,<2834021..2834091,2834174..2834282,2851215..2851286)
location: region:2806263-2851286:1
so has part: feature:2806263-2806332:1:exon
so has part: feature:2808389-2808494:1:exon
so has part: feature:2824373-2824454:1:exon
so has part: feature:2827158-2827293:1:exon
so has part: feature:2827405-2827556:1:exon
so has part: feature:2834021-2834091:1:exon
so has part: feature:2834174-2834282:1:exon
so has part: feature:2851215-2851286:1:exon

XP_037545280.1
type: Protein
SIO_000068: ncbiprotein

position:2806263:1
position: 2806263
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2851286:1
position: 2851286
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2806263-2806332:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2808389-2808494:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2824373-2824454:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2827158-2827293:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2827405-2827556:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2834021-2834091:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2834174-2834282:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2851215-2851286:1:exon

rcn3
type: Gene
subclass of: SO_0000704
RO_0002162: 451745
gene: rcn3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2851570..3018381)
location: region:2851570-3018381:-1
so has part: feature:2851570-3018381:-1:exon
subclass of: SO_0000010

119421937
type: Gene
SIO_000068: ncbigene

position:2851570:-1
position: 2851570
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3018381:-1
position: 3018381
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2851570-3018381:-1:exon

rcn3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 451745
gene: rcn3
product: reticulocalbin 3, EF-hand calcium binding domain
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 96% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_037689300.1
SIO_010081: rcn3
subclass of: SO_0000673
so part of: rcn3
location: complement(join(2851570..2851717,2944948..2945055,2975725..2975897,3008222..3008415,3018153..3018381))
location: region:2851570-3018381:-1
so has part: feature:3018153-3018381:-1:exon
so has part: feature:3008222-3008415:-1:exon
so has part: feature:2975725-2975897:-1:exon
so has part: feature:2944948-2945055:-1:exon
so has part: feature:2851570-2851717:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3018153-3018381:-1:exon

position:3018153:-1
position: 3018153
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3008222-3008415:-1:exon

position:3008222:-1
position: 3008222
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3008415:-1
position: 3008415
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2975725-2975897:-1:exon

position:2975725:-1
position: 2975725
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2975897:-1
position: 2975897
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2944948-2945055:-1:exon

position:2944948:-1
position: 2944948
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2945055:-1
position: 2945055
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2851570-2851717:-1:exon

position:2851717:-1
position: 2851717
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

rcn3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 451745
gene: rcn3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: reticulocalbin-3
translation: MSIMVLLSSVVFFSSLAAVVFAVPAQEKRVHHQADLSNHAHDDTHGYQYDHEAFLGKEEAKTFDQLTPEESKDRLAKIVDRIDVDKDGYINHAELHHWIKHRQRRYIQDNVNKHWKDYDKNQDDKISWEEYKNTTYGFYLGEEFDDVEDKNTYKSMLTRDERRFKAADRDSDGIATREEFTAFLHPEEFDHMRDVVVQDSFLDAAEVAQWVLPGEVDHADNEAKHLIHETDTDKDNRLSVSEVLEHLDYIRTSTITDYGGMRVDEHDEL
SIO_010081: rcn3
subclass of: SO_0000673
so part of: rcn3
location: complement(join(2851610..2851717,2944948..2945055,2975725..2975897,3008222..3008415,3018153..3018379))
location: region:2851610-3018379:-1
so has part: feature:3018153-3018379:-1:exon
so has part: feature:3008222-3008415:-1:exon
so has part: feature:2975725-2975897:-1:exon
so has part: feature:2944948-2945055:-1:exon
so has part: feature:2851610-2851717:-1:exon

XP_037545228.1
type: Protein
SIO_000068: ncbiprotein

position:2851610:-1
position: 2851610
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3018379:-1
position: 3018379
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3018153-3018379:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3008222-3008415:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2975725-2975897:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2944948-2945055:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2851610-2851717:-1:exon

abat
type: Gene
subclass of: SO_0000704
RO_0002162: 451745
gene: abat
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(3096451..3228260)
location: region:3096451-3228260:-1
so has part: feature:3096451-3228260:-1:exon
subclass of: SO_0000010

119421427
type: Gene
SIO_000068: ncbigene

position:3096451:-1
position: 3096451
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3228260:-1
position: 3228260
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3096451-3228260:-1:exon

abat
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 451745
gene: abat
product: 4-aminobutyrate aminotransferase
inference: similar to RNA sequence (same species):INSD:GELZ01038165.1
exception: annotated by transcript or proteomic data
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: added 147 bases not found in genome assembly; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_037688785.1
SIO_010081: abat
subclass of: SO_0000673
so part of: abat
location: complement(join(3096451..3098201,3099524..>3099635,<3145170..3145337,3149769..3149906,3149975..3150123,3150393..3150456,3150531..3150593,3153926..3154018,3154117..3154197,3154874..3154923,3159253..3159370,3168377..3168406,3168494..3168591,3204822..3204936,3228139..3228260))
location: region:3096451-3228260:-1
so has part: feature:3228139-3228260:-1:exon
so has part: feature:3204822-3204936:-1:exon
so has part: feature:3168494-3168591:-1:exon
so has part: feature:3168377-3168406:-1:exon
so has part: feature:3159253-3159370:-1:exon
so has part: feature:3154874-3154923:-1:exon
so has part: feature:3154117-3154197:-1:exon
so has part: feature:3153926-3154018:-1:exon
so has part: feature:3150531-3150593:-1:exon
so has part: feature:3150393-3150456:-1:exon
so has part: feature:3149975-3150123:-1:exon
so has part: feature:3149769-3149906:-1:exon
so has part: feature:3145170-3145337:-1:exon
so has part: feature:3099524-3099635:-1:exon
so has part: feature:3096451-3098201:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3228139-3228260:-1:exon

position:3228139:-1
position: 3228139
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3204822-3204936:-1:exon

position:3204822:-1
position: 3204822
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3204936:-1
position: 3204936
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3168494-3168591:-1:exon

position:3168494:-1
position: 3168494
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3168591:-1
position: 3168591
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3168377-3168406:-1:exon

position:3168377:-1
position: 3168377
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3168406:-1
position: 3168406
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:3159253-3159370:-1:exon

position:3159253:-1
position: 3159253
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3159370:-1
position: 3159370
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:3154874-3154923:-1:exon

position:3154874:-1
position: 3154874
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3154923:-1
position: 3154923
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:3154117-3154197:-1:exon

position:3154117:-1
position: 3154117
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3154197:-1
position: 3154197
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:3153926-3154018:-1:exon

position:3153926:-1
position: 3153926
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3154018:-1
position: 3154018
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:3150531-3150593:-1:exon

position:3150531:-1
position: 3150531
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3150593:-1
position: 3150593
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:3150393-3150456:-1:exon

position:3150393:-1
position: 3150393
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3150456:-1
position: 3150456
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:3149975-3150123:-1:exon

position:3149975:-1
position: 3149975
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3150123:-1
position: 3150123
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:3149769-3149906:-1:exon

position:3149769:-1
position: 3149769
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3149906:-1
position: 3149906
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:3145170-3145337:-1:exon

position:3145170:-1
position: 3145170
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

position:3145337:-1
position: 3145337
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:3099524-3099635:-1:exon

position:3099524:-1
position: 3099524
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3099635:-1
position: 3099635
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 15
SIO_000628: feature:3096451-3098201:-1:exon

position:3098201:-1
position: 3098201
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

abat
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 451745
gene: abat
inference: similar to RNA sequence (same species):INSD:GELZ01038165.1
exception: annotated by transcript or proteomic data
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: added 147 bases not found in genome assembly; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: 4-aminobutyrate aminotransferase, mitochondrial
translation: MATSLVSRHLSLFLQKNLKLSAAGCKYVSKAAAKTQVEYDYDGPLMKTVVPGPRSQELTKQLGDIQNVGAINFFCNYDESRGNYLVDVDGNRMLDIYTQISSIPIGYNHPALLKLMTNPNNLSAFVNRPALGILPPENFPDKITESLLSVTPSGMSRVQTMTCGSCSNENAYKAMFIWYKNKERGYSTPSEADLRTCMINQAPGCPDLSILSFMGGFHGRTMGCLATTHSKVIHKLDVPSFDWPIAPFPRLQYPLEEFSRENAQEEARCLEEVEDLIVKWRQKGKPVAGVVIEPIQAEGGDNHASPNFFRELRNIARKHGAAFHVDEVQTGGGCTGKFWAHEHWAMDDPADIVSFSKKLLTGGYFYRDELQADKAYRIFNTWMGDPSKNLFLAEVLNVIRRENLLEEVTRSGKALLNGLYELQAQYPSVLSRARGQGTFCAVDARDAATRDRILLQMRNKGVLLGGCGDSSIRFRPALIFKEYHAHIFLNIFNNVLAQNK
SIO_010081: abat
subclass of: SO_0000673
so part of: abat
location: complement(join(3098080..3098201,3099524..>3099635,<3145170..3145337,3149769..3149906,3149975..3150123,3150393..3150456,3150531..3150593,3153926..3154018,3154117..3154197,3154874..3154923,3159253..3159370,3168377..3168406,3168494..3168591,3204822..3204891))
location: region:3098080-3204891:-1
so has part: feature:3204822-3204891:-1:exon
so has part: feature:3168494-3168591:-1:exon
so has part: feature:3168377-3168406:-1:exon
so has part: feature:3159253-3159370:-1:exon
so has part: feature:3154874-3154923:-1:exon
so has part: feature:3154117-3154197:-1:exon
so has part: feature:3153926-3154018:-1:exon
so has part: feature:3150531-3150593:-1:exon
so has part: feature:3150393-3150456:-1:exon
so has part: feature:3149975-3150123:-1:exon
so has part: feature:3149769-3149906:-1:exon
so has part: feature:3145170-3145337:-1:exon
so has part: feature:3099524-3099635:-1:exon
so has part: feature:3098080-3098201:-1:exon

XP_037544713.1
type: Protein
SIO_000068: ncbiprotein

position:3098080:-1
position: 3098080
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3204891:-1
position: 3204891
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3204822-3204891:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3168494-3168591:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3168377-3168406:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3159253-3159370:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3154874-3154923:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3154117-3154197:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3153926-3154018:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3150531-3150593:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3150393-3150456:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3149975-3150123:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3149769-3149906:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3145170-3145337:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3099524-3099635:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:3098080-3098201:-1:exon

carm1
type: Gene
subclass of: SO_0000704
RO_0002162: 451745
gene: carm1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(3278192..3453495)
location: region:3278192-3453495:-1
so has part: feature:3278192-3453495:-1:exon
subclass of: SO_0000010

119421939
type: Gene
SIO_000068: ncbigene

position:3278192:-1
position: 3278192
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3453495:-1
position: 3453495
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3278192-3453495:-1:exon

carm1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 451745
gene: carm1
product: coactivator-associated arginine methyltransferase 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 Proteins, and 86% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_037689301.1
SIO_010081: carm1
subclass of: SO_0000673
so part of: carm1
location: complement(join(3278192..3278773,3278851..3278919,3310634..3310711,3342937..3343049,3354981..3355070,3376295..3376432,3376511..3376600,3376673..3376758,3376904..3376985,3385098..3385188,3386625..3386802,3389168..3389278,3394543..3394647,3426364..3426470,3436626..3436751,3453249..3453495))
location: region:3278192-3453495:-1
so has part: feature:3453249-3453495:-1:exon
so has part: feature:3436626-3436751:-1:exon
so has part: feature:3426364-3426470:-1:exon
so has part: feature:3394543-3394647:-1:exon
so has part: feature:3389168-3389278:-1:exon
so has part: feature:3386625-3386802:-1:exon
so has part: feature:3385098-3385188:-1:exon
so has part: feature:3376904-3376985:-1:exon
so has part: feature:3376673-3376758:-1:exon
so has part: feature:3376511-3376600:-1:exon
so has part: feature:3376295-3376432:-1:exon
so has part: feature:3354981-3355070:-1:exon
so has part: feature:3342937-3343049:-1:exon
so has part: feature:3310634-3310711:-1:exon
so has part: feature:3278851-3278919:-1:exon
so has part: feature:3278192-3278773:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3453249-3453495:-1:exon

position:3453249:-1
position: 3453249
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3436626-3436751:-1:exon

position:3436626:-1
position: 3436626
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3436751:-1
position: 3436751
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3426364-3426470:-1:exon

position:3426364:-1
position: 3426364
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3426470:-1
position: 3426470
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3394543-3394647:-1:exon

position:3394543:-1
position: 3394543
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3394647:-1
position: 3394647
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:3389168-3389278:-1:exon

position:3389168:-1
position: 3389168
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3389278:-1
position: 3389278
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:3386625-3386802:-1:exon

position:3386625:-1
position: 3386625
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3386802:-1
position: 3386802
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:3385098-3385188:-1:exon

position:3385098:-1
position: 3385098
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3385188:-1
position: 3385188
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:3376904-3376985:-1:exon

position:3376904:-1
position: 3376904
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3376985:-1
position: 3376985
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:3376673-3376758:-1:exon

position:3376673:-1
position: 3376673
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3376758:-1
position: 3376758
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:3376511-3376600:-1:exon

position:3376511:-1
position: 3376511
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3376600:-1
position: 3376600
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:3376295-3376432:-1:exon

position:3376295:-1
position: 3376295
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3376432:-1
position: 3376432
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:3354981-3355070:-1:exon

position:3354981:-1
position: 3354981
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3355070:-1
position: 3355070
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:3342937-3343049:-1:exon

position:3342937:-1
position: 3342937
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3343049:-1
position: 3343049
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:3310634-3310711:-1:exon

position:3310634:-1
position: 3310634
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3310711:-1
position: 3310711
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:3278851-3278919:-1:exon

position:3278851:-1
position: 3278851
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3278919:-1
position: 3278919
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:3278192-3278773:-1:exon

position:3278773:-1
position: 3278773
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

carm1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 451745
gene: carm1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: histone-arginine methyltransferase CARM1
translation: MLSVLGLVFGVDEDVIKINKDKHLKKITKNIIDKGLENCWGIGQPEWHDQVFEMPQRGLKSSLPLVSFADADEMVGVTEIEFREDTSVFKCSVSRETECSRVGKQSFIITLGCNSVLLQFSSPADFQSFYNLLKNCRGHLGEHSVFSERTEESSAVQYFQFYGYLSQQQNMMQDYVRTGTYQRAILQNHTDFKDKVVLDVGCGSGILSFFAAQAGARKVYAVEASTMAQHAELLVNSNRLGERVVVIPGKVEEVTLPEQVDIIISEPMGYMLFNERMLESYLHAKKFLKPSGKMFPTIGDVHLAPFTDEQLYMEQFTKANFWYQPSFHGVDLSALRGAAVDEYFRQPIVDTFDIRILMAKSVKYTVNFLEAKEEDLYRIEIPFKFHMMHSGLVHGLAFWFDVAFMGSVMTVWLSTAPTEPLTHWYQVRCLLQSPLFAKAGDTLSGTAMLVANKRQSYDISIVAQVDQTGSKSSNLLDLKNPFFRYTGTTPNPPPGSHYTSPSENMWNTGAAYNMSQGMAVSGMPAAYDLSTVIGSGPAVSHNNLIPLVNTGIVNHTHSRMGSIMSTGIVQGATTGQSGPSSSGTYYPITNQFTMGGAAISMASPMVIPSNTMHYGS
SIO_010081: carm1
subclass of: SO_0000673
so part of: carm1
location: complement(join(3278634..3278773,3278851..3278919,3310634..3310711,3342937..3343049,3354981..3355070,3376295..3376432,3376511..3376600,3376673..3376758,3376904..3376985,3385098..3385188,3386625..3386802,3389168..3389278,3394543..3394647,3426364..3426470,3436626..3436751,3453249..3453495))
location: region:3278634-3453495:-1
so has part: feature:3453249-3453495:-1:exon
so has part: feature:3436626-3436751:-1:exon
so has part: feature:3426364-3426470:-1:exon
so has part: feature:3394543-3394647:-1:exon
so has part: feature:3389168-3389278:-1:exon
so has part: feature:3386625-3386802:-1:exon
so has part: feature:3385098-3385188:-1:exon
so has part: feature:3376904-3376985:-1:exon
so has part: feature:3376673-3376758:-1:exon
so has part: feature:3376511-3376600:-1:exon
so has part: feature:3376295-3376432:-1:exon
so has part: feature:3354981-3355070:-1:exon
so has part: feature:3342937-3343049:-1:exon
so has part: feature:3310634-3310711:-1:exon
so has part: feature:3278851-3278919:-1:exon
so has part: feature:3278634-3278773:-1:exon

XP_037545229.1
type: Protein
SIO_000068: ncbiprotein

position:3278634:-1
position: 3278634
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3453249-3453495:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3436626-3436751:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3426364-3426470:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3394543-3394647:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3389168-3389278:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3386625-3386802:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3385098-3385188:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3376904-3376985:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3376673-3376758:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3376511-3376600:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3376295-3376432:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3354981-3355070:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3342937-3343049:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:3310634-3310711:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:3278851-3278919:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:3278634-3278773:-1:exon

LOC119421429
type: Gene
subclass of: SO_0000704
RO_0002162: 451745
gene: LOC119421429
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: complement(3371789..3373361)
location: region:3371789-3373361:-1
so has part: feature:3371789-3373361:-1:exon

119421429
type: Gene
SIO_000068: ncbigene

position:3371789:-1
position: 3371789
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3373361:-1
position: 3373361
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3371789-3373361:-1:exon

LOC119421429
type: Exon
subclass of: SO_0000147
RO_0002162: 451745
gene: LOC119421429
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 15 Proteins, and 11% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC119421429
subclass of: SO_0000673
so part of: LOC119421429
location: complement(3371789..3373361)
location: region:3371789-3373361:-1
so has part: feature:3371789-3373361:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3371789-3373361:-1:exon

LOC119421940
type: Gene
subclass of: SO_0000704
RO_0002162: 451745
gene: LOC119421940
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 3522692..3635199
location: region:3522692-3635199:1
so has part: feature:3522692-3635199:1:exon
subclass of: SO_0000010

119421940
type: Gene
SIO_000068: ncbigene

position:3522692:1
position: 3522692
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3635199:1
position: 3635199
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3522692-3635199:1:exon

LOC119421940
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 451745
gene: LOC119421940
product: cytochrome b561
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins, and 56% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_037689302.1
SIO_010081: LOC119421940
subclass of: SO_0000673
so part of: LOC119421940
location: join(3522692..3522905,3570217..3570315,3570395..3570498,3610853..3611010,3634825..3635199)
location: region:3522692-3635199:1
so has part: feature:3522692-3522905:1:exon
so has part: feature:3570217-3570315:1:exon
so has part: feature:3570395-3570498:1:exon
so has part: feature:3610853-3611010:1:exon
so has part: feature:3634825-3635199:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3522692-3522905:1:exon

position:3522905:1
position: 3522905
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3570217-3570315:1:exon

position:3570217:1
position: 3570217
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3570315:1
position: 3570315
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3570395-3570498:1:exon

position:3570395:1
position: 3570395
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3570498:1
position: 3570498
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3610853-3611010:1:exon

position:3610853:1
position: 3610853
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3611010:1
position: 3611010
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:3634825-3635199:1:exon

position:3634825:1
position: 3634825
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC119421940
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 451745
gene: LOC119421940
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cytochrome b561
translation: MGVLEAVSADMGVLEAVSADMGVLEAALADMGVLEAALADMEGRGSAAADMEGRGSAAADMEGRGAAEADMAILVYRVFRNETKRNVKLLHGIIHLLALIISIVGVVAVFDFHKAANIPDMYSLHSWCGMATLVLFCVQWVMGLLFFLFPGMSSRLRSMYLPIHMFCGLTLLLMAIGTSLLGITEKLLFSITSTYSLFAPEGMLANVLGILLVLYGGVLCYLMTREEYRRPPNPEEETLSVHFKTLTEGGSPGFP
SIO_010081: LOC119421940
subclass of: SO_0000673
so part of: LOC119421940
location: join(3522692..3522905,3570217..3570315,3570395..3570498,3610853..3611010,3634825..3635017)
location: region:3522692-3635017:1
so has part: feature:3522692-3522905:1:exon
so has part: feature:3570217-3570315:1:exon
so has part: feature:3570395-3570498:1:exon
so has part: feature:3610853-3611010:1:exon
so has part: feature:3634825-3635017:1:exon

XP_037545230.1
type: Protein
SIO_000068: ncbiprotein

position:3635017:1
position: 3635017
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3522692-3522905:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3570217-3570315:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3570395-3570498:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3610853-3611010:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3634825-3635017:1:exon

rpl23
type: Gene
subclass of: SO_0000704
RO_0002162: 451745
gene: rpl23
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 3703442..3710130
location: region:3703442-3710130:1
so has part: feature:3703442-3710130:1:exon
subclass of: SO_0000010

119422008
type: Gene
SIO_000068: ncbigene

position:3703442:1
position: 3703442
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3710130:1
position: 3710130
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3703442-3710130:1:exon

rpl23
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 451745
gene: rpl23
product: ribosomal protein L23
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 30 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_037689353.1
SIO_010081: rpl23
subclass of: SO_0000673
so part of: rpl23
location: join(3703442..3703495,3704477..3704560,3706287..3706415,3709620..3709733,3710012..3710130)
location: region:3703442-3710130:1
so has part: feature:3703442-3703495:1:exon
so has part: feature:3704477-3704560:1:exon
so has part: feature:3706287-3706415:1:exon
so has part: feature:3709620-3709733:1:exon
so has part: feature:3710012-3710130:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3703442-3703495:1:exon

position:3703495:1
position: 3703495
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3704477-3704560:1:exon

position:3704477:1
position: 3704477
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3704560:1
position: 3704560
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3706287-3706415:1:exon

position:3706287:1
position: 3706287
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3706415:1
position: 3706415
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3709620-3709733:1:exon

position:3709620:1
position: 3709620
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3709733:1
position: 3709733
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:3710012-3710130:1:exon

position:3710012:1
position: 3710012
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

rpl23
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 451745
gene: rpl23
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: 60S ribosomal protein L23
translation: MSKRGRGGSSGAKFRISLGLPVGAVINCADNTGAKNLYIISVKGIKGRLNRLPAAGVGDMVMATVKKGKPELRKKVHPAVVIRQRKSYRRKDGVFLYFEDNAGVIVNNKGEMKGSAITGPVAKECADLWPRIASNAGSIA
SIO_010081: rpl23
subclass of: SO_0000673
so part of: rpl23
location: join(3703483..3703495,3704477..3704560,3706287..3706415,3709620..3709733,3710012..3710094)
location: region:3703483-3710094:1
so has part: feature:3703483-3703495:1:exon
so has part: feature:3704477-3704560:1:exon
so has part: feature:3706287-3706415:1:exon
so has part: feature:3709620-3709733:1:exon
so has part: feature:3710012-3710094:1:exon

XP_037545281.1
type: Protein
SIO_000068: ncbiprotein

position:3703483:1
position: 3703483
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3710094:1
position: 3710094
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3703483-3703495:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3704477-3704560:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3706287-3706415:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3709620-3709733:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3710012-3710094:1:exon

timm29
type: Gene
subclass of: SO_0000704
RO_0002162: 451745
gene: timm29
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(3731629..3739103)
location: region:3731629-3739103:-1
so has part: feature:3731629-3739103:-1:exon
subclass of: SO_0000010

119422009
type: Gene
SIO_000068: ncbigene

position:3731629:-1
position: 3731629
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3739103:-1
position: 3739103
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3731629-3739103:-1:exon

timm29
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 451745
gene: timm29
product: translocase of inner mitochondrial membrane 29
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_037689354.1
SIO_010081: timm29
subclass of: SO_0000673
so part of: timm29
location: complement(join(3731629..3732812,3738909..3739103))
location: region:3731629-3739103:-1
so has part: feature:3738909-3739103:-1:exon
so has part: feature:3731629-3732812:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3738909-3739103:-1:exon

position:3738909:-1
position: 3738909
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3731629-3732812:-1:exon

position:3732812:-1
position: 3732812
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

timm29
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 451745
gene: timm29
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: mitochondrial import inner membrane translocase subunit Tim29
translation: MVWFRAVGRMFCSTAQSGAAPGSASRWEKMKTSKAGVWCRSLLSDYREACRETVVGAWERPLKTSLYASLLGSAWICFYTKPDRSLFEAALLERSNQLALLSPWVRNATSDSHVQSLMKLRNEGRLRCASLGLLSVIYRADFDPDVTLYEARCSNLSTPWRELPQRVLDIGFAGHWWILDSKMNDYDVNEEEFKFLPAYMQATSPPSVQEVGKNQNLHKDSWLPLTMEEEKAHAVEMKRS
SIO_010081: timm29
subclass of: SO_0000673
so part of: timm29
location: complement(join(3732196..3732812,3738909..3739014))
location: region:3732196-3739014:-1
so has part: feature:3738909-3739014:-1:exon
so has part: feature:3732196-3732812:-1:exon

XP_037545282.1
type: Protein
SIO_000068: ncbiprotein

position:3732196:-1
position: 3732196
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3739014:-1
position: 3739014
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3738909-3739014:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3732196-3732812:-1:exon

LOC119422010
type: Gene
subclass of: SO_0000704
RO_0002162: 451745
gene: LOC119422010
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(3765944..3766395)
location: region:3765944-3766395:-1
so has part: feature:3765944-3766395:-1:exon
subclass of: SO_0000011

119422010
type: Gene
SIO_000068: ncbigene

position:3765944:-1
position: 3765944
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3766395:-1
position: 3766395
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3765944-3766395:-1:exon

LOC119422010
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 451745
nc RNA class: lncRNA
gene: LOC119422010
product: uncharacterized LOC119422010
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XR_005187389.1
SIO_010081: LOC119422010
subclass of: SO_0000673
so part of: LOC119422010
location: complement(join(3765944..3766020,3766091..3766171,3766247..3766395))
location: region:3765944-3766395:-1
so has part: feature:3766247-3766395:-1:exon
so has part: feature:3766091-3766171:-1:exon
so has part: feature:3765944-3766020:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3766247-3766395:-1:exon

position:3766247:-1
position: 3766247
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3766091-3766171:-1:exon

position:3766091:-1
position: 3766091
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3766171:-1
position: 3766171
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3765944-3766020:-1:exon

position:3766020:-1
position: 3766020
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

yipf2
type: Gene
subclass of: SO_0000704
RO_0002162: 451745
gene: yipf2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: <3785578..3810173
location: region:3785578-3810173:1
so has part: feature:3785578-3810173:1:exon
subclass of: SO_0000010

119422011
type: Gene
SIO_000068: ncbigene

position:3785578:1
position: 3785578
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

position:3810173:1
position: 3810173
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3785578-3810173:1:exon

yipf2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 451745
gene: yipf2
product: Yip1 domain family, member 2
inference: similar to RNA sequence (same species):INSD:GELZ01005883.1
exception: annotated by transcript or proteomic data
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: added 116 bases not found in genome assembly; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 14 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_037689355.1
SIO_010081: yipf2
subclass of: SO_0000673
so part of: yipf2
location: join(<3785578..3785694,3785762..3785928,3800229..3800411,3809982..3810173)
location: region:3785578-3810173:1
so has part: feature:3785578-3785694:1:exon
so has part: feature:3785762-3785928:1:exon
so has part: feature:3800229-3800411:1:exon
so has part: feature:3809982-3810173:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3785578-3785694:1:exon

position:3785694:1
position: 3785694
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3785762-3785928:1:exon

position:3785762:1
position: 3785762
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3785928:1
position: 3785928
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3800229-3800411:1:exon

position:3800229:1
position: 3800229
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3800411:1
position: 3800411
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3809982-3810173:1:exon

position:3809982:1
position: 3809982
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

yipf2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 451745
gene: yipf2
inference: similar to RNA sequence (same species):INSD:GELZ01005883.1
exception: annotated by transcript or proteomic data
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: added 61 bases not found in genome assembly; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 3
product: protein YIPF2
translation: MPLPGRNFIKHYLRNNPDLYGPFWICMTLVFSVAISGNLSTFLRKMGSPNYHYRPQFHRVTIAAVVIFLYAWLVPVGLWAFLTWRQGTERQMGGYSFLETVCVYGYSLFIFIPTSILWIIPLEPLQWTLIVVAMVVSGSVLVLTFWPVVRDDSKFMAVGTMITIVVLNALLAIGCKLYFFQTPDQTPSPTAPGIYSNLTVQAH
SIO_010081: yipf2
subclass of: SO_0000673
so part of: yipf2
location: join(<3785578..3785694,3785762..3785928,3800229..3800411,3809982..3810065)
location: region:3785578-3810065:1
so has part: feature:3785578-3785694:1:exon
so has part: feature:3785762-3785928:1:exon
so has part: feature:3800229-3800411:1:exon
so has part: feature:3809982-3810065:1:exon

XP_037545283.1
type: Protein
SIO_000068: ncbiprotein

position:3810065:1
position: 3810065
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3785578-3785694:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3785762-3785928:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3800229-3800411:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3809982-3810065:1:exon

mettl22
type: Gene
subclass of: SO_0000704
RO_0002162: 451745
gene: mettl22
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(3970674..4120267)
location: region:3970674-4120267:-1
so has part: feature:3970674-4120267:-1:exon
subclass of: SO_0000010

119421941
type: Gene
SIO_000068: ncbigene

position:3970674:-1
position: 3970674
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4120267:-1
position: 4120267
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3970674-4120267:-1:exon

mettl22
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 451745
gene: mettl22
product: methyltransferase 22, Kin17 lysine
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 95% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_037689303.1
SIO_010081: mettl22
subclass of: SO_0000673
so part of: mettl22
location: complement(join(3970674..3970696,3995162..3995215,3997790..3997861,4008681..4008825,4009950..4009990,4049027..4049166,4066240..4066435,4078550..4078709,4120211..4120267))
location: region:3970674-4120267:-1
so has part: feature:4120211-4120267:-1:exon
so has part: feature:4078550-4078709:-1:exon
so has part: feature:4066240-4066435:-1:exon
so has part: feature:4049027-4049166:-1:exon
so has part: feature:4009950-4009990:-1:exon
so has part: feature:4008681-4008825:-1:exon
so has part: feature:3997790-3997861:-1:exon
so has part: feature:3995162-3995215:-1:exon
so has part: feature:3970674-3970696:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4120211-4120267:-1:exon

position:4120211:-1
position: 4120211
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4078550-4078709:-1:exon

position:4078550:-1
position: 4078550
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4078709:-1
position: 4078709
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4066240-4066435:-1:exon

position:4066240:-1
position: 4066240
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4066435:-1
position: 4066435
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:4049027-4049166:-1:exon

position:4049027:-1
position: 4049027
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4049166:-1
position: 4049166
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:4009950-4009990:-1:exon

position:4009950:-1
position: 4009950
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4009990:-1
position: 4009990
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:4008681-4008825:-1:exon

position:4008681:-1
position: 4008681
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4008825:-1
position: 4008825
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:3997790-3997861:-1:exon

position:3997790:-1
position: 3997790
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3997861:-1
position: 3997861
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:3995162-3995215:-1:exon

position:3995162:-1
position: 3995162
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3995215:-1
position: 3995215
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:3970674-3970696:-1:exon

position:3970696:-1
position: 3970696
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

mettl22
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 451745
gene: mettl22
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: methyltransferase-like protein 22
translation: MDEITFHYDTVLSDVHMHKPCVRHLMTRLNTTGQPVFMSRFRILAERPYKDDPGKGLGKEEKDGDPVEDKQDFREKDESEGGKGNEEPCLDEDGDLSIKHRPRKPSVDGDRDLVCPVILKQFNTEFEQEEGNVDDEEGLCSKDILRIEHTMATPLEDVGKQVWRGALLLADFILSKPDLFRGSTVLDMGAGTGLTSIVMATTAKKVYCTDVGEDLLNLCRRNVSLNKHLIKSADGMVEVRQLDWLQHSLCKGPTVRNA
SIO_010081: mettl22
subclass of: SO_0000673
so part of: mettl22
location: complement(join(3970674..3970696,3995162..3995215,3997790..3997861,4008681..4008825,4009950..4009990,4049027..4049166,4066240..4066435,4078550..4078655))
location: region:3970674-4078655:-1
so has part: feature:4078550-4078655:-1:exon
so has part: feature:4066240-4066435:-1:exon
so has part: feature:4049027-4049166:-1:exon
so has part: feature:4009950-4009990:-1:exon
so has part: feature:4008681-4008825:-1:exon
so has part: feature:3997790-3997861:-1:exon
so has part: feature:3995162-3995215:-1:exon
so has part: feature:3970674-3970696:-1:exon

XP_037545231.1
type: Protein
SIO_000068: ncbiprotein

position:4078655:-1
position: 4078655
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4078550-4078655:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4066240-4066435:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4049027-4049166:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4009950-4009990:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4008681-4008825:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3997790-3997861:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3995162-3995215:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3970674-3970696:-1:exon

hao1
type: Gene
subclass of: SO_0000704
RO_0002162: 451745
gene: hao1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(4129072..4233257)
location: region:4129072-4233257:-1
so has part: feature:4129072-4233257:-1:exon
subclass of: SO_0000010

119421430
type: Gene
SIO_000068: ncbigene

position:4129072:-1
position: 4129072
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4233257:-1
position: 4233257
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4129072-4233257:-1:exon

hao1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 451745
gene: hao1
product: hydroxyacid oxidase (glycolate oxidase) 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 13 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_037688786.1
SIO_010081: hao1
subclass of: SO_0000673
so part of: hao1
location: complement(join(4129072..4129139,4150144..4150213,4150340..4150498,4165136..4165227,4183301..4183473,4183649..4183919,4200964..4201115,4233093..4233257))
location: region:4129072-4233257:-1
so has part: feature:4233093-4233257:-1:exon
so has part: feature:4200964-4201115:-1:exon
so has part: feature:4183649-4183919:-1:exon
so has part: feature:4183301-4183473:-1:exon
so has part: feature:4165136-4165227:-1:exon
so has part: feature:4150340-4150498:-1:exon
so has part: feature:4150144-4150213:-1:exon
so has part: feature:4129072-4129139:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4233093-4233257:-1:exon

position:4233093:-1
position: 4233093
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4200964-4201115:-1:exon

position:4200964:-1
position: 4200964
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4201115:-1
position: 4201115
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4183649-4183919:-1:exon

position:4183649:-1
position: 4183649
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4183919:-1
position: 4183919
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:4183301-4183473:-1:exon

position:4183301:-1
position: 4183301
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4183473:-1
position: 4183473
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:4165136-4165227:-1:exon

position:4165136:-1
position: 4165136
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4165227:-1
position: 4165227
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:4150340-4150498:-1:exon

position:4150340:-1
position: 4150340
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4150498:-1
position: 4150498
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:4150144-4150213:-1:exon

position:4150144:-1
position: 4150144
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4150213:-1
position: 4150213
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:4129072-4129139:-1:exon

position:4129139:-1
position: 4129139
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

hao1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 451745
gene: hao1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: hydroxyacid oxidase 1
translation: MLQKCVCVSDFEQEARRLLPKAVYDYYSSGADGQSTLADNVAAFNRWYLLPRVMRDVSTVDLSVTVLGQKLSMPLCVGATAMQRMAHPAGETATARACKAAGTGMMLSSWATSSIEEVMAAMTTSPGSEGLLWMQLYIYKDQELTLSLVRRAEKAGYKAIFVTVDTPYLGKRLDDVRNRFKMPPHLRMSNFSTASLAFSEDNYGSDSGLAVYVANAIEPALSWDHITWLRRHTHLPVVVKGVLNGEDAAKAVNYGVSGILVSNHGARQLDGVPATLDVLEEVVKAVQGRCEVYLDGGVRRGTDILKALALGAKAVFIGRPVLWALACQGEEGVTELLELLRQELQLAMALSGCRSLSEVSRSLVRRVDFSSRM
SIO_010081: hao1
subclass of: SO_0000673
so part of: hao1
location: complement(join(4129072..4129139,4150144..4150213,4150340..4150498,4165136..4165227,4183301..4183473,4183649..4183919,4200964..4201115,4233093..4233229))
location: region:4129072-4233229:-1
so has part: feature:4233093-4233229:-1:exon
so has part: feature:4200964-4201115:-1:exon
so has part: feature:4183649-4183919:-1:exon
so has part: feature:4183301-4183473:-1:exon
so has part: feature:4165136-4165227:-1:exon
so has part: feature:4150340-4150498:-1:exon
so has part: feature:4150144-4150213:-1:exon
so has part: feature:4129072-4129139:-1:exon

XP_037544714.1
type: Protein
SIO_000068: ncbiprotein

position:4233229:-1
position: 4233229
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4233093-4233229:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4200964-4201115:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4183649-4183919:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4183301-4183473:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4165136-4165227:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4150340-4150498:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4150144-4150213:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4129072-4129139:-1:exon

LOC119421432
type: Gene
subclass of: SO_0000704
RO_0002162: 451745
gene: LOC119421432
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(4233875..>4239230)
location: region:4233875-4239230:-1
so has part: feature:4233875-4239230:-1:exon
subclass of: SO_0000010

119421432
type: Gene
SIO_000068: ncbigene

position:4233875:-1
position: 4233875
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4239230:-1
position: 4239230
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4233875-4239230:-1:exon

LOC119421432
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 451745
gene: LOC119421432
product: serine/threonine-protein kinase SMG1
inference: similar to RNA sequence (same species):INSD:GELZ01008923.1
exception: annotated by transcript or proteomic data
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: added 172 bases not found in genome assembly; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 99% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_037688788.1
SIO_010081: LOC119421432
subclass of: SO_0000673
so part of: LOC119421432
location: complement(join(4233875..4234603,4238870..4238976,4239054..>4239230))
location: region:4233875-4239230:-1
so has part: feature:4239054-4239230:-1:exon
so has part: feature:4238870-4238976:-1:exon
so has part: feature:4233875-4234603:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4239054-4239230:-1:exon

position:4239054:-1
position: 4239054
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4238870-4238976:-1:exon

position:4238870:-1
position: 4238870
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4238976:-1
position: 4238976
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4233875-4234603:-1:exon

position:4234603:-1
position: 4234603
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC119421432
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 451745
gene: LOC119421432
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: serine/threonine-protein kinase SMG1
translation: MSQNARKAMPRNLGTPTDTPPSTLLTNSKGLNPSPKRAVRDPKTGRAVQERNLYAVSVWKRVKAKLEGRDIDPNRRMSVTEQVDVVIKEATNMDNLAQLYEGWTAWV
SIO_010081: LOC119421432
subclass of: SO_0000673
so part of: LOC119421432
location: complement(join(4234526..4234603,4238870..4238976,4239054..4239192))
location: region:4234526-4239192:-1
so has part: feature:4239054-4239192:-1:exon
so has part: feature:4238870-4238976:-1:exon
so has part: feature:4234526-4234603:-1:exon

XP_037544716.1
type: Protein
SIO_000068: ncbiprotein

position:4234526:-1
position: 4234526
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4239192:-1
position: 4239192
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4239054-4239192:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4238870-4238976:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4234526-4234603:-1:exon

LOC119421942
type: Gene
subclass of: SO_0000704
RO_0002162: 451745
gene: LOC119421942
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(4291778..4328047)
location: region:4291778-4328047:-1
so has part: feature:4291778-4328047:-1:exon
subclass of: SO_0000010

119421942
type: Gene
SIO_000068: ncbigene

position:4291778:-1
position: 4291778
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4328047:-1
position: 4328047
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4291778-4328047:-1:exon

LOC119421942
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 451745
gene: LOC119421942
product: serine/threonine-protein kinase SMG1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 84% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_037689304.1
SIO_010081: LOC119421942
subclass of: SO_0000673
so part of: LOC119421942
location: complement(join(4291778..4292118,4292353..4292542,4293942..4294098,4306088..4306299,4315494..4315725,4322338..4322610,4327948..4328047))
location: region:4291778-4328047:-1
so has part: feature:4327948-4328047:-1:exon
so has part: feature:4322338-4322610:-1:exon
so has part: feature:4315494-4315725:-1:exon
so has part: feature:4306088-4306299:-1:exon
so has part: feature:4293942-4294098:-1:exon
so has part: feature:4292353-4292542:-1:exon
so has part: feature:4291778-4292118:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4327948-4328047:-1:exon

position:4327948:-1
position: 4327948
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4322338-4322610:-1:exon

position:4322338:-1
position: 4322338
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4322610:-1
position: 4322610
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4315494-4315725:-1:exon

position:4315494:-1
position: 4315494
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4315725:-1
position: 4315725
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:4306088-4306299:-1:exon

position:4306088:-1
position: 4306088
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4306299:-1
position: 4306299
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:4293942-4294098:-1:exon

position:4293942:-1
position: 4293942
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4294098:-1
position: 4294098
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:4292353-4292542:-1:exon

position:4292353:-1
position: 4292353
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4292542:-1
position: 4292542
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:4291778-4292118:-1:exon

position:4292118:-1
position: 4292118
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC119421942
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 451745
gene: LOC119421942
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: serine/threonine-protein kinase SMG1
translation: MTVEHCQHIYRQYEVLFAPQPPAAACQFLSNVELTLQHQVAETNERMLHQAERLKAEGTTVSACEEQLQEIENCITVFLRENGESGSLSLAAIITSALCTLCRRNLVMEGAAASAGEQLIDLTSRDGAWFLEELCSMLGNVSALVTLFQRCPLPHDLELPAPSLTIQAVYLANCVYTCLQELNSNFRQIIFPEALRCMIKGEPTLKSMLSELEQLVEHSSDGLGLQGLADNLQATTGLDHDGHNHYLHITRMLRAHYSELIQPHSLDEDGQETPKMSAGQMLLVAFDGMFTQLETAFGQLTDKLSSLEVPSAWRKVDVLKEARATQLNVFDSPNQRQLMEEVFFLKRLQTIRDFFRVCSSFAQTLTGTCPPAEDLLPINGPGGVGKPLFRRSSAAGSGLLVISEEQMTHPIKAFTAEFVRLMLMGLPGQALGLALCSTLSALGLDVVAQVEVKDFGAEIKVCVLTVPCRCRSTDTPPVF
SIO_010081: LOC119421942
subclass of: SO_0000673
so part of: LOC119421942
location: complement(join(4291778..4292118,4292353..4292542,4293942..4294098,4306088..4306299,4315494..4315725,4322338..4322610,4327948..4327982))
location: region:4291778-4327982:-1
so has part: feature:4327948-4327982:-1:exon
so has part: feature:4322338-4322610:-1:exon
so has part: feature:4315494-4315725:-1:exon
so has part: feature:4306088-4306299:-1:exon
so has part: feature:4293942-4294098:-1:exon
so has part: feature:4292353-4292542:-1:exon
so has part: feature:4291778-4292118:-1:exon

XP_037545232.1
type: Protein
SIO_000068: ncbiprotein

position:4327982:-1
position: 4327982
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4327948-4327982:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4322338-4322610:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4315494-4315725:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4306088-4306299:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4293942-4294098:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4292353-4292542:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4291778-4292118:-1:exon

LOC119421431
type: Gene
subclass of: SO_0000704
RO_0002162: 451745
gene: LOC119421431
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(<4459853..4460502)
location: region:4459853-4460502:-1
so has part: feature:4459853-4460502:-1:exon
subclass of: SO_0000010

119421431
type: Gene
SIO_000068: ncbigene

position:4459853:-1
position: 4459853
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

position:4460502:-1
position: 4460502
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4459853-4460502:-1:exon

LOC119421431
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 451745
gene: LOC119421431
product: serine/threonine-protein kinase SMG1
inference: similar to RNA sequence (same species):INSD:GELZ01013379.1
exception: annotated by transcript or proteomic data
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: added 383 bases not found in genome assembly; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 97% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_037688787.1
SIO_010081: LOC119421431
subclass of: SO_0000673
so part of: LOC119421431
location: complement(join(<4459853..4459991,4460079..4460223,4460406..4460502))
location: region:4459853-4460502:-1
so has part: feature:4460406-4460502:-1:exon
so has part: feature:4460079-4460223:-1:exon
so has part: feature:4459853-4459991:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4460406-4460502:-1:exon

position:4460406:-1
position: 4460406
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4460079-4460223:-1:exon

position:4460079:-1
position: 4460079
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4460223:-1
position: 4460223
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4459853-4459991:-1:exon

position:4459991:-1
position: 4459991
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC119421431
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 451745
gene: LOC119421431
inference: similar to RNA sequence (same species):INSD:GELZ01013379.1
exception: annotated by transcript or proteomic data
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: added 383 bases not found in genome assembly; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: serine/threonine-protein kinase SMG1
translation: MSPLSRNIAALLELPVEDQGNTLITAETSVNVGVGEPDFVLGQLYQLSTSLAPELAKSWASLASWAYRWGRKVVDNASQGEGLPLLAEEKADIEELLPATTSQEDKDAVFSILGQAICRPTGIQDEDMALQQDDDEDDMVDVIWRQLTSSCPWLGEAGQHVTDGLIRVWRRVVDRIFGLYRVSCHAYFTFLKLNAGQVPVDEDDPKLLLSYHNSKQSNDDVIVMATLRLLRLLVKHAGELREGLELGLASTP
SIO_010081: LOC119421431
subclass of: SO_0000673
so part of: LOC119421431
location: complement(join(<4459853..4459991,4460079..4460223,4460406..4460493))
location: region:4459853-4460493:-1
so has part: feature:4460406-4460493:-1:exon
so has part: feature:4460079-4460223:-1:exon
so has part: feature:4459853-4459991:-1:exon

XP_037544715.1
type: Protein
SIO_000068: ncbiprotein

position:4460493:-1
position: 4460493
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4460406-4460493:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4460079-4460223:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4459853-4459991:-1:exon

LOC119421945
type: Gene
subclass of: SO_0000704
RO_0002162: 451745
gene: LOC119421945
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(<4465511..4504882)
location: region:4465511-4504882:-1
so has part: feature:4465511-4504882:-1:exon
subclass of: SO_0000010

119421945
type: Gene
SIO_000068: ncbigene

position:4465511:-1
position: 4465511
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

position:4504882:-1
position: 4504882
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4465511-4504882:-1:exon

LOC119421945
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 451745
gene: LOC119421945
product: serine/threonine-protein kinase SMG1
inference: similar to RNA sequence (same species):INSD:GELZ01013371.1
exception: annotated by transcript or proteomic data
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: added 35 bases not found in genome assembly; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 86% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_037689305.1
SIO_010081: LOC119421945
subclass of: SO_0000673
so part of: LOC119421945
location: complement(join(<4465511..4465663,4474613..4474855,4494896..4495016,4498396..4498546,4502326..4502461,4503752..4504063,4504822..4504882))
location: region:4465511-4504882:-1
so has part: feature:4504822-4504882:-1:exon
so has part: feature:4503752-4504063:-1:exon
so has part: feature:4502326-4502461:-1:exon
so has part: feature:4498396-4498546:-1:exon
so has part: feature:4494896-4495016:-1:exon
so has part: feature:4474613-4474855:-1:exon
so has part: feature:4465511-4465663:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4504822-4504882:-1:exon

position:4504822:-1
position: 4504822
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4503752-4504063:-1:exon

position:4503752:-1
position: 4503752
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4504063:-1
position: 4504063
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4502326-4502461:-1:exon

position:4502326:-1
position: 4502326
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4502461:-1
position: 4502461
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:4498396-4498546:-1:exon

position:4498396:-1
position: 4498396
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4498546:-1
position: 4498546
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:4494896-4495016:-1:exon

position:4494896:-1
position: 4494896
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4495016:-1
position: 4495016
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:4474613-4474855:-1:exon

position:4474613:-1
position: 4474613
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4474855:-1
position: 4474855
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:4465511-4465663:-1:exon

position:4465663:-1
position: 4465663
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC119421945
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 451745
gene: LOC119421945
inference: similar to RNA sequence (same species):INSD:GELZ01013371.1
exception: annotated by transcript or proteomic data
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: added 35 bases not found in genome assembly; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: serine/threonine-protein kinase SMG1
translation: MSDWEETLEKTHDTLERLSLSDIRKTVLLKSTECSPEVVNFLANKSCQCYVALCDWASVKEWQTTISALKQNSTNPVNINLRTDFNYIQALSHFEEGDLAECGSQLELLPGEDYTSISSSKDKLDLKNLLPSMSPDPVELQRAIEVQLLRTAVSAMAKASQQEEQRSTLDTLVRCLKQTGRICLGPLRLSTLTLSDPLPTLPTLQLHCAATMENSLTGQDDCVIPLSSEALNSCKQQDVQLFLQALRYSMFQRQLLSKLKGYSSSINGHLLELCLTAAKFSRKKGNIVLACRLLSQCCDGTQEKQKDDLCLTFRQLSLEGTLGEKWGPEVQIEKAKVLRTAGQSLTAMEMLSTTALSYCHVGKNEAAACRSLLTLCKWLLADWKDMTPQLKQVMKKSGAVSNMS
SIO_010081: LOC119421945
subclass of: SO_0000673
so part of: LOC119421945
location: complement(join(<4465511..4465663,4474613..4474855,4494896..4495016,4498396..4498546,4502326..4502461,4503752..4504063,4504822..4504882))
location: region:4465511-4504882:-1
so has part: feature:4504822-4504882:-1:exon
so has part: feature:4503752-4504063:-1:exon
so has part: feature:4502326-4502461:-1:exon
so has part: feature:4498396-4498546:-1:exon
so has part: feature:4494896-4495016:-1:exon
so has part: feature:4474613-4474855:-1:exon
so has part: feature:4465511-4465663:-1:exon

XP_037545233.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4504822-4504882:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4503752-4504063:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4502326-4502461:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4498396-4498546:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4494896-4495016:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4474613-4474855:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4465511-4465663:-1:exon

LOC119421946
type: Gene
subclass of: SO_0000704
RO_0002162: 451745
gene: LOC119421946
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(4525297..4588316)
location: region:4525297-4588316:-1
so has part: feature:4525297-4588316:-1:exon
subclass of: SO_0000010

119421946
type: Gene
SIO_000068: ncbigene

position:4525297:-1
position: 4525297
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4588316:-1
position: 4588316
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4525297-4588316:-1:exon

LOC119421946
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 451745
gene: LOC119421946
product: serine/threonine-protein kinase SMG1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 72% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_037689306.1
SIO_010081: LOC119421946
subclass of: SO_0000673
so part of: LOC119421946
location: complement(join(4525297..4525477,4528575..4528736,4532490..4532620,4542383..4542673,4543111..4543212,4565934..4566155,4569872..4570045,4570283..4570380,4571038..4571110,4571207..4571332,4580110..4580323,4587647..4587705,4588302..4588316))
location: region:4525297-4588316:-1
so has part: feature:4588302-4588316:-1:exon
so has part: feature:4587647-4587705:-1:exon
so has part: feature:4580110-4580323:-1:exon
so has part: feature:4571207-4571332:-1:exon
so has part: feature:4571038-4571110:-1:exon
so has part: feature:4570283-4570380:-1:exon
so has part: feature:4569872-4570045:-1:exon
so has part: feature:4565934-4566155:-1:exon
so has part: feature:4543111-4543212:-1:exon
so has part: feature:4542383-4542673:-1:exon
so has part: feature:4532490-4532620:-1:exon
so has part: feature:4528575-4528736:-1:exon
so has part: feature:4525297-4525477:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4588302-4588316:-1:exon

position:4588302:-1
position: 4588302
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4587647-4587705:-1:exon

position:4587647:-1
position: 4587647
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4587705:-1
position: 4587705
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4580110-4580323:-1:exon

position:4580110:-1
position: 4580110
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4580323:-1
position: 4580323
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:4571207-4571332:-1:exon

position:4571207:-1
position: 4571207
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4571332:-1
position: 4571332
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:4571038-4571110:-1:exon

position:4571038:-1
position: 4571038
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4571110:-1
position: 4571110
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:4570283-4570380:-1:exon

position:4570283:-1
position: 4570283
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4570380:-1
position: 4570380
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:4569872-4570045:-1:exon

position:4569872:-1
position: 4569872
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4570045:-1
position: 4570045
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:4565934-4566155:-1:exon

position:4565934:-1
position: 4565934
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4566155:-1
position: 4566155
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:4543111-4543212:-1:exon

position:4543111:-1
position: 4543111
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4543212:-1
position: 4543212
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:4542383-4542673:-1:exon

position:4542383:-1
position: 4542383
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4542673:-1
position: 4542673
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:4532490-4532620:-1:exon

position:4532490:-1
position: 4532490
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4532620:-1
position: 4532620
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:4528575-4528736:-1:exon

position:4528575:-1
position: 4528575
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4528736:-1
position: 4528736
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:4525297-4525477:-1:exon

position:4525477:-1
position: 4525477
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC119421946
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 451745
gene: LOC119421946
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: serine/threonine-protein kinase SMG1
translation: MACEQTLVKQLDTILSTLNDIFNESSKLLWELRQEAAACLGLLSTVLSYEAERIFKWLFLKFTSSSRDEVKLLYLMAAHRALEAAGERKAFSHIMQLVMSNLQSILENVDTPELLYQSVKCILQVARCYPHVFSTNFRDTVDILVGWHIDHTQKQSLTQQVSGWLQSLEQFWVADLTFSTTLLGQFLEDMEAYAEDLNHVMSGEALDEDIPPPSVSLPKLAALLRVFSTVVRSIGERFSPLRGPPITEVYVTDVLNRVLACVMAAKQVQFSEVVLTAGNECVGVLLASVEPCGQLMETVLAYGLDQLACCRACGSDYSLAVLSLLTLIVDQVNTKLPVSFVDKLLAPDSQLLYLRFHPEKEVLSAVHGVYHALLSLKNIPTLEAAYKMVLGEMACALSSLLGSMEPGGTNLAPSSPCASIQHPAFASCTLPVEKAEFTLIFNLSTLTTIGNTKNSLIGMWALSPTVFTLLSNNLMLVHAELAVYYPTIQYAVLYSLFSHCTRHDHFISSSLSSSSPSLFDGAVISTVTTATKKHFSTLLSLLGSLLSKEHLSSDARKLLLTWAQEVSLLMMKCETYSPLFSLPSFNKFCRGLLDNGEATISIQELLMVLTLSKTF
SIO_010081: LOC119421946
subclass of: SO_0000673
so part of: LOC119421946
location: complement(join(4525297..4525477,4528575..4528736,4532490..4532620,4542383..4542673,4543111..4543212,4565934..4566155,4569872..4570045,4570283..4570380,4571038..4571110,4571207..4571332,4580110..4580323,4587647..4587705,4588302..4588316))
location: region:4525297-4588316:-1
so has part: feature:4588302-4588316:-1:exon
so has part: feature:4587647-4587705:-1:exon
so has part: feature:4580110-4580323:-1:exon
so has part: feature:4571207-4571332:-1:exon
so has part: feature:4571038-4571110:-1:exon
so has part: feature:4570283-4570380:-1:exon
so has part: feature:4569872-4570045:-1:exon
so has part: feature:4565934-4566155:-1:exon
so has part: feature:4543111-4543212:-1:exon
so has part: feature:4542383-4542673:-1:exon
so has part: feature:4532490-4532620:-1:exon
so has part: feature:4528575-4528736:-1:exon
so has part: feature:4525297-4525477:-1:exon

XP_037545234.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4588302-4588316:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4587647-4587705:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4580110-4580323:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4571207-4571332:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4571038-4571110:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4570283-4570380:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4569872-4570045:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4565934-4566155:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4543111-4543212:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4542383-4542673:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:4532490-4532620:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:4528575-4528736:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:4525297-4525477:-1:exon

si:dkeyp-72e1.9
type: Gene
subclass of: SO_0000704
RO_0002162: 451745
gene: si:dkeyp-72e1.9
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 4779118..4886759
location: region:4779118-4886759:1
so has part: feature:4779118-4886759:1:exon
subclass of: SO_0000010

119421947
type: Gene
SIO_000068: ncbigene

position:4779118:1
position: 4779118
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4886759:1
position: 4886759
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4779118-4886759:1:exon

si:dkeyp-72e1.9
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 451745
gene: si:dkeyp-72e1.9
product: syntaxin-binding protein 4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 70% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_037689307.1
SIO_010081: si:dkeyp-72e1.9
subclass of: SO_0000673
so part of: si:dkeyp-72e1.9
location: join(4779118..4779208,4779372..4779460,4780592..4780688,4830170..4830297,4849627..4849719,4862020..4862085,4862248..4862445,4883972..4884088,4885332..4885381,4885479..4885616,4886666..4886759)
location: region:4779118-4886759:1
so has part: feature:4779118-4779208:1:exon
so has part: feature:4779372-4779460:1:exon
so has part: feature:4780592-4780688:1:exon
so has part: feature:4830170-4830297:1:exon
so has part: feature:4849627-4849719:1:exon
so has part: feature:4862020-4862085:1:exon
so has part: feature:4862248-4862445:1:exon
so has part: feature:4883972-4884088:1:exon
so has part: feature:4885332-4885381:1:exon
so has part: feature:4885479-4885616:1:exon
so has part: feature:4886666-4886759:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4779118-4779208:1:exon

position:4779208:1
position: 4779208
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4779372-4779460:1:exon

position:4779372:1
position: 4779372
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4779460:1
position: 4779460
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4780592-4780688:1:exon

position:4780592:1
position: 4780592
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4780688:1
position: 4780688
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:4830170-4830297:1:exon

position:4830170:1
position: 4830170
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4830297:1
position: 4830297
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:4849627-4849719:1:exon

position:4849627:1
position: 4849627
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4849719:1
position: 4849719
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:4862020-4862085:1:exon

position:4862020:1
position: 4862020
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4862085:1
position: 4862085
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:4862248-4862445:1:exon

position:4862248:1
position: 4862248
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4862445:1
position: 4862445
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:4883972-4884088:1:exon

position:4883972:1
position: 4883972
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4884088:1
position: 4884088
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:4885332-4885381:1:exon

position:4885332:1
position: 4885332
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4885381:1
position: 4885381
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:4885479-4885616:1:exon

position:4885479:1
position: 4885479
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4885616:1
position: 4885616
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:4886666-4886759:1:exon

position:4886666:1
position: 4886666
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

si:dkeyp-72e1.9
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 451745
gene: si:dkeyp-72e1.9
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: syntaxin-binding protein 4
translation: MYHRYTRGCVPLSPPPLQGHGHKARSNVKHGSTSQRSPTGAKPRITLDPYIRLKSDKLDLALSFLGLDVSEDKRKKLRQSLAADPQGTVAYGDFEEASRNTFQQELEDLGLGAVPFTFSYHEAASLMDTSAFHSPTYDSECSYSSEEMEQFQTEVKQLQTQMKQLKVMLKDMEYSKKTLEEELQKTSEKAYLTVEENTRLKSRLQAAEAEAVQRQTSSADQDYEEVIQLLEAEIRDLKNQLAGKRQSHGAEANKEEVVELNRRLTTIDYRLKKSELSRKQLEVSNKKLLGFAQNVHNVLTTPSLFGGEGGSRSSPVTDSPDALSPLPDPAFQLAVEAKQLVAGGCTVATDDKGTPNFECCLMCRVSSCMSPRGLKDQPITEEAEPK
SIO_010081: si:dkeyp-72e1.9
subclass of: SO_0000673
so part of: si:dkeyp-72e1.9
location: join(4779118..4779208,4779372..4779460,4780592..4780688,4830170..4830297,4849627..4849719,4862020..4862085,4862248..4862445,4883972..4884088,4885332..4885381,4885479..4885616,4886666..4886759)
location: region:4779118-4886759:1
so has part: feature:4779118-4779208:1:exon
so has part: feature:4779372-4779460:1:exon
so has part: feature:4780592-4780688:1:exon
so has part: feature:4830170-4830297:1:exon
so has part: feature:4849627-4849719:1:exon
so has part: feature:4862020-4862085:1:exon
so has part: feature:4862248-4862445:1:exon
so has part: feature:4883972-4884088:1:exon
so has part: feature:4885332-4885381:1:exon
so has part: feature:4885479-4885616:1:exon
so has part: feature:4886666-4886759:1:exon

XP_037545235.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4779118-4779208:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4779372-4779460:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4780592-4780688:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4830170-4830297:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4849627-4849719:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4862020-4862085:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4862248-4862445:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4883972-4884088:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4885332-4885381:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4885479-4885616:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:4886666-4886759:1:exon

rrn3
type: Gene
subclass of: SO_0000704
RO_0002162: 451745
gene: rrn3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(4907198..5006919)
location: region:4907198-5006919:-1
so has part: feature:4907198-5006919:-1:exon
subclass of: SO_0000010

119421949
type: Gene
SIO_000068: ncbigene

position:4907198:-1
position: 4907198
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5006919:-1
position: 5006919
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4907198-5006919:-1:exon

rrn3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 451745
gene: rrn3
product: RRN3 homolog, RNA polymerase I transcription factor
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 63% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_037689308.1
SIO_010081: rrn3
subclass of: SO_0000673
so part of: rrn3
location: complement(join(4907198..4907347,4954555..4954744,4985548..4985656,4985758..4985945,4994186..4994338,5006681..5006813,5006889..5006919))
location: region:4907198-5006919:-1
so has part: feature:5006889-5006919:-1:exon
so has part: feature:5006681-5006813:-1:exon
so has part: feature:4994186-4994338:-1:exon
so has part: feature:4985758-4985945:-1:exon
so has part: feature:4985548-4985656:-1:exon
so has part: feature:4954555-4954744:-1:exon
so has part: feature:4907198-4907347:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5006889-5006919:-1:exon

position:5006889:-1
position: 5006889
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:5006681-5006813:-1:exon

position:5006681:-1
position: 5006681
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5006813:-1
position: 5006813
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4994186-4994338:-1:exon

position:4994186:-1
position: 4994186
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4994338:-1
position: 4994338
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:4985758-4985945:-1:exon

position:4985758:-1
position: 4985758
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4985945:-1
position: 4985945
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:4985548-4985656:-1:exon

position:4985548:-1
position: 4985548
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4985656:-1
position: 4985656
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:4954555-4954744:-1:exon

position:4954555:-1
position: 4954555
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4954744:-1
position: 4954744
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:4907198-4907347:-1:exon

position:4907347:-1
position: 4907347
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

rrn3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 451745
gene: rrn3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: RNA polymerase I-specific transcription initiation factor RRN3
translation: MTCFSTGTLEGLVGEEGLLVRWSKEWNTGKWLEGEKSQEEMRSKQPDTEEHEEIGFSVSLTQALAEAFLDHLWKILQNPSQPAILRQAAAGYLGSFLARAKFVPVLSVRACLDLLVSWIHRYMDSQDSSGRQVCCDVSLHGPFYAACQAVFYTLIFRHRAILEVNMKKGLEYLQSLNLERVVLCQLNPLKVCLPPVTNMFAAITRKYQVVFCYSVIEKNNRQVLPVVRSSAGGDGVSTNTNPLDSFFPFDPYLLKRCSVGCFSNPLTFGSKEDEDDFLHGETLHTEAVLGMTPSSLGSNLCSPSSMGSPPLSHQHPF
SIO_010081: rrn3
subclass of: SO_0000673
so part of: rrn3
location: complement(join(4907198..4907347,4954555..4954744,4985548..4985656,4985758..4985945,4994186..4994338,5006681..5006813,5006889..5006919))
location: region:4907198-5006919:-1
so has part: feature:5006889-5006919:-1:exon
so has part: feature:5006681-5006813:-1:exon
so has part: feature:4994186-4994338:-1:exon
so has part: feature:4985758-4985945:-1:exon
so has part: feature:4985548-4985656:-1:exon
so has part: feature:4954555-4954744:-1:exon
so has part: feature:4907198-4907347:-1:exon

XP_037545236.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:5006889-5006919:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5006681-5006813:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4994186-4994338:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4985758-4985945:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4985548-4985656:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4954555-4954744:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4907198-4907347:-1:exon

LOC119421433
type: Gene
subclass of: SO_0000704
RO_0002162: 451745
gene: LOC119421433
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(5047981..5092893)
location: region:5047981-5092893:-1
so has part: feature:5047981-5092893:-1:exon
subclass of: SO_0000011

119421433
type: Gene
SIO_000068: ncbigene

position:5047981:-1
position: 5047981
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5092893:-1
position: 5092893
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5047981-5092893:-1:exon

LOC119421433
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 451745
nc RNA class: lncRNA
gene: LOC119421433
product: uncharacterized LOC119421433
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XR_005187367.1
SIO_010081: LOC119421433
subclass of: SO_0000673
so part of: LOC119421433
location: complement(join(5047981..5048110,5073680..5073775,5073958..5074056,5092824..5092893))
location: region:5047981-5092893:-1
so has part: feature:5092824-5092893:-1:exon
so has part: feature:5073958-5074056:-1:exon
so has part: feature:5073680-5073775:-1:exon
so has part: feature:5047981-5048110:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5092824-5092893:-1:exon

position:5092824:-1
position: 5092824
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:5073958-5074056:-1:exon

position:5073958:-1
position: 5073958
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5074056:-1
position: 5074056
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:5073680-5073775:-1:exon

position:5073680:-1
position: 5073680
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5073775:-1
position: 5073775
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:5047981-5048110:-1:exon

position:5048110:-1
position: 5048110
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC119421434
type: Gene
subclass of: SO_0000704
RO_0002162: 451745
gene: LOC119421434
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(5117494..5127625)
location: region:5117494-5127625:-1
so has part: feature:5117494-5127625:-1:exon
subclass of: SO_0000011

119421434
type: Gene
SIO_000068: ncbigene

position:5117494:-1
position: 5117494
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5127625:-1
position: 5127625
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5117494-5127625:-1:exon

LOC119421434
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 451745
nc RNA class: lncRNA
gene: LOC119421434
product: uncharacterized LOC119421434
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XR_005187368.1
SIO_010081: LOC119421434
subclass of: SO_0000673
so part of: LOC119421434
location: complement(join(5117494..5117563,5127184..5127240,5127357..5127625))
location: region:5117494-5127625:-1
so has part: feature:5127357-5127625:-1:exon
so has part: feature:5127184-5127240:-1:exon
so has part: feature:5117494-5117563:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5127357-5127625:-1:exon

position:5127357:-1
position: 5127357
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:5127184-5127240:-1:exon

position:5127184:-1
position: 5127184
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5127240:-1
position: 5127240
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:5117494-5117563:-1:exon

position:5117563:-1
position: 5117563
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC119422012
type: Gene
subclass of: SO_0000704
RO_0002162: 451745
gene: LOC119422012
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 5153447..5162337
location: region:5153447-5162337:1
so has part: feature:5153447-5162337:1:exon
subclass of: SO_0000011

119422012
type: Gene
SIO_000068: ncbigene

position:5153447:1
position: 5153447
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5162337:1
position: 5162337
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5153447-5162337:1:exon

LOC119422012
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 451745
nc RNA class: lncRNA
gene: LOC119422012
product: uncharacterized LOC119422012
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XR_005187390.1
SIO_010081: LOC119422012
subclass of: SO_0000673
so part of: LOC119422012
location: join(5153447..5153551,5153700..5153759,5162274..5162337)
location: region:5153447-5162337:1
so has part: feature:5153447-5153551:1:exon
so has part: feature:5153700-5153759:1:exon
so has part: feature:5162274-5162337:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5153447-5153551:1:exon

position:5153551:1
position: 5153551
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:5153700-5153759:1:exon

position:5153700:1
position: 5153700
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5153759:1
position: 5153759
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:5162274-5162337:1:exon

position:5162274:1
position: 5162274
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

si:dkeyp-72e1.6
type: Gene
subclass of: SO_0000704
RO_0002162: 451745
gene: si:dkeyp-72e1.6
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(5209407..5241929)
location: region:5209407-5241929:-1
so has part: feature:5209407-5241929:-1:exon
subclass of: SO_0000010

119422014
type: Gene
SIO_000068: ncbigene

position:5209407:-1
position: 5209407
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5241929:-1
position: 5241929
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5209407-5241929:-1:exon

si:dkeyp-72e1.6
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 451745
gene: si:dkeyp-72e1.6
product: transmembrane protein 238-like
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 75% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_037689356.1
SIO_010081: si:dkeyp-72e1.6
subclass of: SO_0000673
so part of: si:dkeyp-72e1.6
location: complement(join(5209407..5209629,5241402..5241929))
location: region:5209407-5241929:-1
so has part: feature:5241402-5241929:-1:exon
so has part: feature:5209407-5209629:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5241402-5241929:-1:exon

position:5241402:-1
position: 5241402
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:5209407-5209629:-1:exon

position:5209629:-1
position: 5209629
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

si:dkeyp-72e1.6
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 451745
gene: si:dkeyp-72e1.6
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: transmembrane protein 238-like
translation: MEPEFRGLGRCACSFWLAVAFDIAGLVVLLVGVFANVFFYDLLIYAGSIVIFLSLIWWVFWYSGNIEVPPAELQDDVGLLKKAKSGGGSGLGGTVRRLSSRLTHGFRNSFRRNGGPPAGRAQQPGVAQVAVAMATVSPQDSSSRAAVPPEADGDVHMSRTTMETSAT
SIO_010081: si:dkeyp-72e1.6
subclass of: SO_0000673
so part of: si:dkeyp-72e1.6
location: complement(5241405..5241909)
location: region:5241405-5241909:-1
so has part: feature:5241405-5241909:-1:exon

XP_037545284.1
type: Protein
SIO_000068: ncbiprotein

position:5241405:-1
position: 5241405
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5241909:-1
position: 5241909
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5241405-5241909:-1:exon

gspt1l
type: Gene
subclass of: SO_0000704
RO_0002162: 451745
gene: gspt1l
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(5270824..5311163)
location: region:5270824-5311163:-1
so has part: feature:5270824-5311163:-1:exon
subclass of: SO_0000010

119422015
type: Gene
SIO_000068: ncbigene

position:5270824:-1
position: 5270824
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5311163:-1
position: 5311163
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5270824-5311163:-1:exon

gspt1l
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 451745
gene: gspt1l
product: G1 to S phase transition 1, like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 47 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_037689357.1
SIO_010081: gspt1l
subclass of: SO_0000673
so part of: gspt1l
location: complement(join(5270824..5271091,5276936..5277104,5277195..5277284,5279078..5279251,5280545..5280625,5280700..5280793,5289332..5289472,5292531..5292685,5294056..5294236,5298409..5298486,5298570..5298603,5300841..5301080,5307360..5307404,5310774..5311163))
location: region:5270824-5311163:-1
so has part: feature:5310774-5311163:-1:exon
so has part: feature:5307360-5307404:-1:exon
so has part: feature:5300841-5301080:-1:exon
so has part: feature:5298570-5298603:-1:exon
so has part: feature:5298409-5298486:-1:exon
so has part: feature:5294056-5294236:-1:exon
so has part: feature:5292531-5292685:-1:exon
so has part: feature:5289332-5289472:-1:exon
so has part: feature:5280700-5280793:-1:exon
so has part: feature:5280545-5280625:-1:exon
so has part: feature:5279078-5279251:-1:exon
so has part: feature:5277195-5277284:-1:exon
so has part: feature:5276936-5277104:-1:exon
so has part: feature:5270824-5271091:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5310774-5311163:-1:exon

position:5310774:-1
position: 5310774
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:5307360-5307404:-1:exon

position:5307360:-1
position: 5307360
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5307404:-1
position: 5307404
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:5300841-5301080:-1:exon

position:5300841:-1
position: 5300841
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5301080:-1
position: 5301080
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:5298570-5298603:-1:exon

position:5298570:-1
position: 5298570
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5298603:-1
position: 5298603
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:5298409-5298486:-1:exon

position:5298409:-1
position: 5298409
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5298486:-1
position: 5298486
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:5294056-5294236:-1:exon

position:5294056:-1
position: 5294056
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5294236:-1
position: 5294236
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:5292531-5292685:-1:exon

position:5292531:-1
position: 5292531
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5292685:-1
position: 5292685
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:5289332-5289472:-1:exon

position:5289332:-1
position: 5289332
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5289472:-1
position: 5289472
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:5280700-5280793:-1:exon

position:5280700:-1
position: 5280700
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5280793:-1
position: 5280793
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:5280545-5280625:-1:exon

position:5280545:-1
position: 5280545
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5280625:-1
position: 5280625
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:5279078-5279251:-1:exon

position:5279078:-1
position: 5279078
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5279251:-1
position: 5279251
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:5277195-5277284:-1:exon

position:5277195:-1
position: 5277195
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5277284:-1
position: 5277284
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:5276936-5277104:-1:exon

position:5276936:-1
position: 5276936
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5277104:-1
position: 5277104
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:5270824-5271091:-1:exon

position:5271091:-1
position: 5271091
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

gspt1l
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 451745
gene: gspt1l
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: G1 to S phase transition 1, like
translation: MEQRDTAPDSWEQEDDVEATVDGQLESAFTALNVNAKPFVPNVNAAEFVPCFSVKAPSENVSCVADEKILTMEVSESTVPVENGDAEMTSEEPWDQKKAEPNEEEPGGMDRGPESASTEEIVPEMMEEEEEILVPKVPPVQPDAPKKEHINVVFIGHVDAGKSTIGGQIMYLTGMVDKRTLEKYEREAKEKNRETWYLSWALDTNQEERDKGKTVEVGRAYFETDKKHFTILDAPGHKSFVPNMIGGASQADLAVLVISARKGEFETGFEKGGQTREHAMLAKTAGVKHLIVLVNKMDDPTVNWSLERYEECKEKLVPFLKKVGFNPKKDIHFMPCSGLTGANLKEPTEMCPWYTGLPFIPHLDSLPSFNRSSDGPVRLPIVDKYKDMGTVVLGKLESGSISKAQQLVMMPNRHVVEVLSLLSDDVETDDAAPGENLKLRLKGIEEEEILPGFILCNAENLCHSGRTFDAQIVIIEHKSIICPGYNAVLHIHTCIEEVQITALICLVDKKSGEKSKTRPRFVKQDQVCIARLRTAGTICLETFKDFPQMGRFTLRDEGKTIAIGKVLKLVAERD
SIO_010081: gspt1l
subclass of: SO_0000673
so part of: gspt1l
location: complement(join(5271039..5271091,5276936..5277104,5277195..5277284,5279078..5279251,5280545..5280625,5280700..5280793,5289332..5289472,5292531..5292685,5294056..5294236,5298409..5298486,5298570..5298603,5300841..5301080,5307360..5307404,5310774..5310963))
location: region:5271039-5310963:-1
so has part: feature:5310774-5310963:-1:exon
so has part: feature:5307360-5307404:-1:exon
so has part: feature:5300841-5301080:-1:exon
so has part: feature:5298570-5298603:-1:exon
so has part: feature:5298409-5298486:-1:exon
so has part: feature:5294056-5294236:-1:exon
so has part: feature:5292531-5292685:-1:exon
so has part: feature:5289332-5289472:-1:exon
so has part: feature:5280700-5280793:-1:exon
so has part: feature:5280545-5280625:-1:exon
so has part: feature:5279078-5279251:-1:exon
so has part: feature:5277195-5277284:-1:exon
so has part: feature:5276936-5277104:-1:exon
so has part: feature:5271039-5271091:-1:exon

XP_037545285.1
type: Protein
SIO_000068: ncbiprotein

position:5271039:-1
position: 5271039
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5310963:-1
position: 5310963
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5310774-5310963:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5307360-5307404:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5300841-5301080:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5298570-5298603:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5298409-5298486:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:5294056-5294236:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:5292531-5292685:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:5289332-5289472:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:5280700-5280793:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:5280545-5280625:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:5279078-5279251:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:5277195-5277284:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:5276936-5277104:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:5271039-5271091:-1:exon

pdxdc1
type: Gene
subclass of: SO_0000704
RO_0002162: 451745
gene: pdxdc1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(5327581..5491493)
location: region:5327581-5491493:-1
so has part: feature:5327581-5491493:-1:exon
subclass of: SO_0000010

119422016
type: Gene
SIO_000068: ncbigene

position:5327581:-1
position: 5327581
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5491493:-1
position: 5491493
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5327581-5491493:-1:exon

pdxdc1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 451745
gene: pdxdc1
product: pyridoxal-dependent decarboxylase domain containing 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_037689358.1
SIO_010081: pdxdc1
subclass of: SO_0000673
so part of: pdxdc1
location: complement(join(5327581..5328018,5334434..5334532,5338717..5338813,5338889..5338981,5345829..5345950,5348908..5349026,5357308..5357482,5357620..5357725,5358979..5359049,5377733..5377799,5490596..5490646,5491178..5491303,5491402..5491493))
location: region:5327581-5491493:-1
so has part: feature:5491402-5491493:-1:exon
so has part: feature:5491178-5491303:-1:exon
so has part: feature:5490596-5490646:-1:exon
so has part: feature:5377733-5377799:-1:exon
so has part: feature:5358979-5359049:-1:exon
so has part: feature:5357620-5357725:-1:exon
so has part: feature:5357308-5357482:-1:exon
so has part: feature:5348908-5349026:-1:exon
so has part: feature:5345829-5345950:-1:exon
so has part: feature:5338889-5338981:-1:exon
so has part: feature:5338717-5338813:-1:exon
so has part: feature:5334434-5334532:-1:exon
so has part: feature:5327581-5328018:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5491402-5491493:-1:exon

position:5491402:-1
position: 5491402
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:5491178-5491303:-1:exon

position:5491178:-1
position: 5491178
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5491303:-1
position: 5491303
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:5490596-5490646:-1:exon

position:5490596:-1
position: 5490596
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5490646:-1
position: 5490646
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:5377733-5377799:-1:exon

position:5377733:-1
position: 5377733
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5377799:-1
position: 5377799
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:5358979-5359049:-1:exon

position:5358979:-1
position: 5358979
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5359049:-1
position: 5359049
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:5357620-5357725:-1:exon

position:5357620:-1
position: 5357620
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5357725:-1
position: 5357725
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:5357308-5357482:-1:exon

position:5357308:-1
position: 5357308
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5357482:-1
position: 5357482
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:5348908-5349026:-1:exon

position:5348908:-1
position: 5348908
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5349026:-1
position: 5349026
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:5345829-5345950:-1:exon

position:5345829:-1
position: 5345829
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5345950:-1
position: 5345950
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:5338889-5338981:-1:exon

position:5338889:-1
position: 5338889
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5338981:-1
position: 5338981
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:5338717-5338813:-1:exon

position:5338717:-1
position: 5338717
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5338813:-1
position: 5338813
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:5334434-5334532:-1:exon

position:5334434:-1
position: 5334434
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5334532:-1
position: 5334532
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:5327581-5328018:-1:exon

position:5328018:-1
position: 5328018
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

pdxdc1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 451745
gene: pdxdc1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: pyridoxal-dependent decarboxylase domain-containing protein 1
translation: MTLTSGQWLGLPAVTAVTLYRHEDPALSLAAGLTSSQPVEKLRALPLWLSLQHLGHNGILQKISHATSLSQQLLLKLKSVASIKTLVEDEENSPVVLFRFYQEMNAGKGSSVGSEDGFSPGEKKLLDTFNRWLGEQLAHLVPTSGVDVVELEDEGTCVRFSPLVTAAVLGTQQKDVEDLLVKLVELVPTMHSTMNLRHDFREETHCHSPSLRYMEELSWPGLGVVRYEPQVEGMDESRMKQELESMNNELLKKLQELDTDIVFSTGPEFVSEENCIFVGMVTKDLDVSELASTITSLGREIEESGRLFENMTERVRKGILEAELQLQKDNEDKLMEEGMLRQLPLVGSVLNWFSPVQSSIKGRTFNLAAGSLDSTDVMFSTKAQEGTTTLQDPPTVTSKKLPGQKLFRRSGGGSDFVNETSSMGQTEETSREDSTSVSTTTDPSTSPPVPETPHPSASDGTAQNISETWQQVETEGQEVEQSGR
SIO_010081: pdxdc1
subclass of: SO_0000673
so part of: pdxdc1
location: complement(join(5327771..5328018,5334434..5334532,5338717..5338813,5338889..5338981,5345829..5345950,5348908..5349026,5357308..5357482,5357620..5357725,5358979..5359049,5377733..5377799,5490596..5490646,5491178..5491303,5491402..5491482))
location: region:5327771-5491482:-1
so has part: feature:5491402-5491482:-1:exon
so has part: feature:5491178-5491303:-1:exon
so has part: feature:5490596-5490646:-1:exon
so has part: feature:5377733-5377799:-1:exon
so has part: feature:5358979-5359049:-1:exon
so has part: feature:5357620-5357725:-1:exon
so has part: feature:5357308-5357482:-1:exon
so has part: feature:5348908-5349026:-1:exon
so has part: feature:5345829-5345950:-1:exon
so has part: feature:5338889-5338981:-1:exon
so has part: feature:5338717-5338813:-1:exon
so has part: feature:5334434-5334532:-1:exon
so has part: feature:5327771-5328018:-1:exon

XP_037545286.1
type: Protein
SIO_000068: ncbiprotein

position:5327771:-1
position: 5327771
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5491482:-1
position: 5491482
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5491402-5491482:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5491178-5491303:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5490596-5490646:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5377733-5377799:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5358979-5359049:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:5357620-5357725:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:5357308-5357482:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:5348908-5349026:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:5345829-5345950:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:5338889-5338981:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:5338717-5338813:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:5334434-5334532:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:5327771-5328018:-1:exon

LOC119422018
type: Gene
subclass of: SO_0000704
RO_0002162: 451745
gene: LOC119422018
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(5387345..5420910)
location: region:5387345-5420910:-1
so has part: feature:5387345-5420910:-1:exon
subclass of: SO_0000011

119422018
type: Gene
SIO_000068: ncbigene

position:5387345:-1
position: 5387345
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5420910:-1
position: 5420910
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5387345-5420910:-1:exon

LOC119422018
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 451745
nc RNA class: lncRNA
gene: LOC119422018
product: uncharacterized LOC119422018
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XR_005187392.1
SIO_010081: LOC119422018
subclass of: SO_0000673
so part of: LOC119422018
location: complement(join(5387345..5387366,5387452..5387500,5420890..5420910))
location: region:5387345-5420910:-1
so has part: feature:5420890-5420910:-1:exon
so has part: feature:5387452-5387500:-1:exon
so has part: feature:5387345-5387366:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5420890-5420910:-1:exon

position:5420890:-1
position: 5420890
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:5387452-5387500:-1:exon

position:5387452:-1
position: 5387452
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5387500:-1
position: 5387500
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:5387345-5387366:-1:exon

position:5387366:-1
position: 5387366
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC119422017
type: Gene
subclass of: SO_0000704
RO_0002162: 451745
gene: LOC119422017
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(5436340..5458851)
location: region:5436340-5458851:-1
so has part: feature:5436340-5458851:-1:exon
subclass of: SO_0000011

119422017
type: Gene
SIO_000068: ncbigene

position:5436340:-1
position: 5436340
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5458851:-1
position: 5458851
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5436340-5458851:-1:exon

LOC119422017
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 451745
nc RNA class: lncRNA
gene: LOC119422017
product: uncharacterized LOC119422017
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XR_005187391.1
SIO_010081: LOC119422017
subclass of: SO_0000673
so part of: LOC119422017
location: complement(join(5436340..5436446,5458549..5458617,5458788..5458851))
location: region:5436340-5458851:-1
so has part: feature:5458788-5458851:-1:exon
so has part: feature:5458549-5458617:-1:exon
so has part: feature:5436340-5436446:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5458788-5458851:-1:exon

position:5458788:-1
position: 5458788
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:5458549-5458617:-1:exon

position:5458549:-1
position: 5458549
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5458617:-1
position: 5458617
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:5436340-5436446:-1:exon

position:5436446:-1
position: 5436446
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC119421435
type: Gene
subclass of: SO_0000704
RO_0002162: 451745
gene: LOC119421435
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 5768401..5798165
location: region:5768401-5798165:1
so has part: feature:5768401-5798165:1:exon
subclass of: SO_0000010

119421435
type: Gene
SIO_000068: ncbigene

position:5768401:1
position: 5768401
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5798165:1
position: 5798165
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5768401-5798165:1:exon

LOC119421435
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 451745
gene: LOC119421435
product: neuronal-specific septin-3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_037688789.1
SIO_010081: LOC119421435
subclass of: SO_0000673
so part of: LOC119421435
location: join(5768401..5768491,5769080..5769176,5778688..5778739,5797445..5798165)
location: region:5768401-5798165:1
so has part: feature:5768401-5768491:1:exon
so has part: feature:5769080-5769176:1:exon
so has part: feature:5778688-5778739:1:exon
so has part: feature:5797445-5798165:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5768401-5768491:1:exon

position:5768491:1
position: 5768491
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:5769080-5769176:1:exon

position:5769080:1
position: 5769080
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5769176:1
position: 5769176
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:5778688-5778739:1:exon

position:5778688:1
position: 5778688
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5778739:1
position: 5778739
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:5797445-5798165:1:exon

position:5797445:1
position: 5797445
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC119421435
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 451745
gene: LOC119421435
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: neuronal-specific septin-3
translation: MANGIKVYPQREYDEDPEERTLNDQIRENIPFAVVGTDKVHQVNGNKVLGRKTKWGIIEVENVTHCEFANLRDLLIRSHLQDLKDVTHNIHYETYRVQRLNDSNMNFSELLLSAWPLENGTDKCETESQL
SIO_010081: LOC119421435
subclass of: SO_0000673
so part of: LOC119421435
location: join(5768411..5768491,5769080..5769176,5778688..5778739,5797445..5797607)
location: region:5768411-5797607:1
so has part: feature:5768411-5768491:1:exon
so has part: feature:5769080-5769176:1:exon
so has part: feature:5778688-5778739:1:exon
so has part: feature:5797445-5797607:1:exon

XP_037544717.1
type: Protein
SIO_000068: ncbiprotein

position:5768411:1
position: 5768411
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5797607:1
position: 5797607
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5768411-5768491:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5769080-5769176:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5778688-5778739:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5797445-5797607:1:exon

fbxl16
type: Gene
subclass of: SO_0000704
RO_0002162: 451745
gene: fbxl16
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(5820306..5924300)
location: region:5820306-5924300:-1
so has part: feature:5820306-5924300:-1:exon
subclass of: SO_0000010

119421437
type: Gene
SIO_000068: ncbigene

position:5820306:-1
position: 5820306
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5924300:-1
position: 5924300
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5820306-5924300:-1:exon

fbxl16
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 451745
gene: fbxl16
product: F-box and leucine-rich repeat protein 16
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_037688790.1
SIO_010081: fbxl16
subclass of: SO_0000673
so part of: fbxl16
location: complement(join(5820306..5821505,5822099..5822162,5843885..5843969,5861737..5862002,5877919..5878161,5880382..5881099,5924018..5924300))
location: region:5820306-5924300:-1
so has part: feature:5924018-5924300:-1:exon
so has part: feature:5880382-5881099:-1:exon
so has part: feature:5877919-5878161:-1:exon
so has part: feature:5861737-5862002:-1:exon
so has part: feature:5843885-5843969:-1:exon
so has part: feature:5822099-5822162:-1:exon
so has part: feature:5820306-5821505:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5924018-5924300:-1:exon

position:5924018:-1
position: 5924018
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:5880382-5881099:-1:exon

position:5880382:-1
position: 5880382
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5881099:-1
position: 5881099
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:5877919-5878161:-1:exon

position:5877919:-1
position: 5877919
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5878161:-1
position: 5878161
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:5861737-5862002:-1:exon

position:5861737:-1
position: 5861737
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5862002:-1
position: 5862002
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:5843885-5843969:-1:exon

position:5843885:-1
position: 5843885
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5843969:-1
position: 5843969
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:5822099-5822162:-1:exon

position:5822099:-1
position: 5822099
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5822162:-1
position: 5822162
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:5820306-5821505:-1:exon

position:5821505:-1
position: 5821505
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

fbxl16
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 451745
gene: fbxl16
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: F-box/LRR-repeat protein 16
translation: MLNMSTPSELKSPCVTRNGMVKLPPSQPNGLGSASITKGTPAAKNRLCQSSSVPSILPPPPSSLPYHHHHHHLDGPGMPHAAVPLLTSDLEPSKSLMALKSTFRQLPPLTLPKPVLLERQLVLDEKLLNRLLWYFTTAEKCVLAQVCKTWRKVLYQPKFWENVTPILHAKELYNILPNGEKEFVSLQAFALRGFQSFCLVGVSDLDICEFIDNYPLSKKGVRSLSLKRSTITDAGLEVMLEQMQGLMHLELSGCNDFTEAGLWSSLNARLTSLSVSDCINVADDAIAAISQLLPNLSELSLQAYHVTDTAMAYFTAKQGYTTHTLRLHSCWEITNHGVVNMVHSLPNLTALSLSGCSKITDDGVELVAENLRKLRSLDLSWCPRITDMALEYIACDLHKLEELVLDRCVRVTDTGLGYLSTMSSLRSLYLRWCCQVQDFGLQHLFGMRSLRLLSLAGCPLLTTTGLSGLIQLQELEELELTNCPGATAELFKYYSQHLPHCMVIE
SIO_010081: fbxl16
subclass of: SO_0000673
so part of: fbxl16
location: complement(join(5821357..5821505,5822099..5822162,5843885..5843969,5861737..5862002,5877919..5878161,5880382..5881092))
location: region:5821357-5881092:-1
so has part: feature:5880382-5881092:-1:exon
so has part: feature:5877919-5878161:-1:exon
so has part: feature:5861737-5862002:-1:exon
so has part: feature:5843885-5843969:-1:exon
so has part: feature:5822099-5822162:-1:exon
so has part: feature:5821357-5821505:-1:exon

XP_037544718.1
type: Protein
SIO_000068: ncbiprotein

position:5821357:-1
position: 5821357
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5881092:-1
position: 5881092
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5880382-5881092:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5877919-5878161:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5861737-5862002:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5843885-5843969:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5822099-5822162:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:5821357-5821505:-1:exon

ppl
type: Gene
subclass of: SO_0000704
RO_0002162: 451745
gene: ppl
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 6402265..6459605
location: region:6402265-6459605:1
so has part: feature:6402265-6459605:1:exon
subclass of: SO_0000010

119421438
type: Gene
SIO_000068: ncbigene

position:6402265:1
position: 6402265
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6459605:1
position: 6459605
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6402265-6459605:1:exon

ppl
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 451745
gene: ppl
product: periplakin
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 41 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_037688791.1
SIO_010081: ppl
subclass of: SO_0000673
so part of: ppl
location: join(6402265..6402498,6422701..6422800,6424325..6424479,6424789..6424909,6428584..6428709,6432017..6432058,6432356..6432517,6432596..6432703,6435054..6435149,6435228..6435350,6435472..6435618,6439089..6439240,6439315..6439424,6440035..6440192,6440272..6440450,6446101..6446239,6449171..6449364,6449483..6449633,6449725..6449808,6449876..6449992,6456370..6456462,6456543..6459605)
location: region:6402265-6459605:1
so has part: feature:6402265-6402498:1:exon
so has part: feature:6422701-6422800:1:exon
so has part: feature:6424325-6424479:1:exon
so has part: feature:6424789-6424909:1:exon
so has part: feature:6428584-6428709:1:exon
so has part: feature:6432017-6432058:1:exon
so has part: feature:6432356-6432517:1:exon
so has part: feature:6432596-6432703:1:exon
so has part: feature:6435054-6435149:1:exon
so has part: feature:6435228-6435350:1:exon
so has part: feature:6435472-6435618:1:exon
so has part: feature:6439089-6439240:1:exon
so has part: feature:6439315-6439424:1:exon
so has part: feature:6440035-6440192:1:exon
so has part: feature:6440272-6440450:1:exon
so has part: feature:6446101-6446239:1:exon
so has part: feature:6449171-6449364:1:exon
so has part: feature:6449483-6449633:1:exon
so has part: feature:6449725-6449808:1:exon
so has part: feature:6449876-6449992:1:exon
so has part: feature:6456370-6456462:1:exon
so has part: feature:6456543-6459605:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6402265-6402498:1:exon

position:6402498:1
position: 6402498
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:6422701-6422800:1:exon

position:6422701:1
position: 6422701
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6422800:1
position: 6422800
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:6424325-6424479:1:exon

position:6424325:1
position: 6424325
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6424479:1
position: 6424479
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:6424789-6424909:1:exon

position:6424789:1
position: 6424789
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6424909:1
position: 6424909
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:6428584-6428709:1:exon

position:6428584:1
position: 6428584
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6428709:1
position: 6428709
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:6432017-6432058:1:exon

position:6432017:1
position: 6432017
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6432058:1
position: 6432058
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:6432356-6432517:1:exon

position:6432356:1
position: 6432356
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6432517:1
position: 6432517
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:6432596-6432703:1:exon

position:6432596:1
position: 6432596
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6432703:1
position: 6432703
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:6435054-6435149:1:exon

position:6435054:1
position: 6435054
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6435149:1
position: 6435149
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:6435228-6435350:1:exon

position:6435228:1
position: 6435228
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6435350:1
position: 6435350
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:6435472-6435618:1:exon

position:6435472:1
position: 6435472
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6435618:1
position: 6435618
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:6439089-6439240:1:exon

position:6439089:1
position: 6439089
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6439240:1
position: 6439240
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:6439315-6439424:1:exon

position:6439315:1
position: 6439315
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6439424:1
position: 6439424
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:6440035-6440192:1:exon

position:6440035:1
position: 6440035
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6440192:1
position: 6440192
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:6440272-6440450:1:exon

position:6440272:1
position: 6440272
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6440450:1
position: 6440450
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:6446101-6446239:1:exon

position:6446101:1
position: 6446101
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6446239:1
position: 6446239
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:6449171-6449364:1:exon

position:6449171:1
position: 6449171
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6449364:1
position: 6449364
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:6449483-6449633:1:exon

position:6449483:1
position: 6449483
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6449633:1
position: 6449633
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:6449725-6449808:1:exon

position:6449725:1
position: 6449725
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6449808:1
position: 6449808
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:6449876-6449992:1:exon

position:6449876:1
position: 6449876
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6449992:1
position: 6449992
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:6456370-6456462:1:exon

position:6456370:1
position: 6456370
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6456462:1
position: 6456462
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:6456543-6459605:1:exon

position:6456543:1
position: 6456543
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

ppl
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 451745
gene: ppl
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: periplakin
translation: MSSSLMKPKKSKTTTLTDSKPTGTTPTELAVLIEKLQKNADKVEKNIYDTEQNLNKDVSKINEGKQTLYQEDTNKRILNSLDLLNFLDEDAANAKRLQHPQAEMIQQDMIQLRERVMKLKEDHERIYHLSRTEGKPTVNWANIMDEKLESLDNKGFGQDLPTVECEVEEHNIFHSEVEALAPHIATGGDKEYISSLQTKYSKLLASSAARQRHLLSLRDYMQHCTNELYWMDQQANERISYDWSDTNLDYPARQRQYENFISKCLESKEATVTKLNDDGQSLIAADHPGKNVIEAHMEAVHADWKEYLNLLICEENHLKHMDEYHKYHKEARDTQDLLKRLDTEVTQKYNPEFKDVYQMESLIGDLNDQAKAVEYFDERVKNLQNNSLQVLPLKYRRETPQKLLPVEALCEFDNDECQIVRGERYTLLRNNGAKWDVKDGTGRKHTAPGICFMIPPTDPEAVIISDNLASQLKALKQKMASSKATLQKRHDALKMEGGGGTATDKQEQQCRQQMAGLDKVIGDLDKQEKAIYSRVRPPLEQNRPLQDSADRLQDLRDIAAAVSKIEPEKSMKVQEAKSFLVSNPNCASAPQLHSKVDEANKKYVKIEQLLSCSQDKMKNSNQLEMSLQHGKTLLSTYENKLAREEVAPADLSSLDKALRELGDIGSDLRSQKSVITETEQNLRLARGSCDDMAIKLQEHCPDIERQEADVQKLSKRYNNLIRQTENRSQSLQRAKMAHKNYRNDYDNLNSWLSRVPNYEPRETDDMRQVETKLKNQRNLLSDIARKESDLNNVSKNAHLYQQAVKDYENETEKFRSILDLEDGLVPQTYKRSRLESPALVVKAEEAAIEAKFTEVNAVNKQRLQNLEFAQNLLSQQPEINVIQSTSLMSVHAAAPGGEPWRIRKQLEDEIQRREQLEKEIETIQTDIYVLEGQKPQDTIVKKEHIKKVPDPQLDEEVHKVQQKLSEERRTTHVLENDLESLKLKLRGLETEVKEGAQQYTVKEVLRIERDRGQEEEIRKLRDELEELRRQKMIKDNELILIQKQVTILAEEKNKEQEVITEEEVIKVQNDPQLESEYRVLLDRKQKEMDNRKQLEDELQFLQEKLRRLEKEKSIAEEKISIKEVLKVEKDVAFEREVENLRRQYEDEKSKRRSSQRERADLQRKIQSLEEEKSKVVIQEKVREIVRPDPKAENEVANLRLELVEQQRRYRDSDLQLKSLQDELVMLKNRGPQVEIKEIIKEVIKYKTDPQTERELERLRNEIVDKTHQTEKSEMEIRQLRDEIDRWRDTKPQVQTKEVVNEVVQYREDPKTKEEIETLKKKLADEQKKRLDLERERSSQEEKIRLKKIDLSQVREKIVQQEVVKMEEDLVLKSECNNFLQSINSEQKQKDNLKAELFQLQRQIADLDLQLEELERERRARRDAELEIQRLRVRLNELEIRDKENREKVTVKQKVVLQQDPQQEKEHSILKLQLDEERHKRTLLQKELDALIQQQITLEKMDVKERVVRTEKVQVERDPEAEIEIENLRRTLEDEKRRRRELDQELSVLTSKLSDMEFSNTKSTKELDYIRDESYRLQQENQRLQNEIRKLRSEIEITSKETRLITESAPREDGKNLELRLDSLQKELADLRSITIQKEEEIEKLKKNLSAVRMKREQRESHLRRSIVVIDPDTGREMRPEEAYKLGLIDWKMFVNLQSQECDWEEITVKGPSGESSVLHDRKSGKKFSIDDALRSGNITNSQLQQYLNKEISIQEFGVLVSGKSY
SIO_010081: ppl
subclass of: SO_0000673
so part of: ppl
location: join(6402431..6402498,6422701..6422800,6424325..6424479,6424789..6424909,6428584..6428709,6432017..6432058,6432356..6432517,6432596..6432703,6435054..6435149,6435228..6435350,6435472..6435618,6439089..6439240,6439315..6439424,6440035..6440192,6440272..6440450,6446101..6446239,6449171..6449364,6449483..6449633,6449725..6449808,6449876..6449992,6456370..6456462,6456543..6459215)
location: region:6402431-6459215:1
so has part: feature:6402431-6402498:1:exon
so has part: feature:6422701-6422800:1:exon
so has part: feature:6424325-6424479:1:exon
so has part: feature:6424789-6424909:1:exon
so has part: feature:6428584-6428709:1:exon
so has part: feature:6432017-6432058:1:exon
so has part: feature:6432356-6432517:1:exon
so has part: feature:6432596-6432703:1:exon
so has part: feature:6435054-6435149:1:exon
so has part: feature:6435228-6435350:1:exon
so has part: feature:6435472-6435618:1:exon
so has part: feature:6439089-6439240:1:exon
so has part: feature:6439315-6439424:1:exon
so has part: feature:6440035-6440192:1:exon
so has part: feature:6440272-6440450:1:exon
so has part: feature:6446101-6446239:1:exon
so has part: feature:6449171-6449364:1:exon
so has part: feature:6449483-6449633:1:exon
so has part: feature:6449725-6449808:1:exon
so has part: feature:6449876-6449992:1:exon
so has part: feature:6456370-6456462:1:exon
so has part: feature:6456543-6459215:1:exon

XP_037544719.1
type: Protein
SIO_000068: ncbiprotein

position:6402431:1
position: 6402431
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6459215:1
position: 6459215
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6402431-6402498:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6422701-6422800:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6424325-6424479:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6424789-6424909:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6428584-6428709:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:6432017-6432058:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:6432356-6432517:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:6432596-6432703:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:6435054-6435149:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:6435228-6435350:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:6435472-6435618:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:6439089-6439240:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:6439315-6439424:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:6440035-6440192:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:6440272-6440450:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:6446101-6446239:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:6449171-6449364:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:6449483-6449633:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:6449725-6449808:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:6449876-6449992:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:6456370-6456462:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:6456543-6459215:1:exon

glyr1
type: Gene
subclass of: SO_0000704
RO_0002162: 451745
gene: glyr1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 6495976..6551687
location: region:6495976-6551687:1
so has part: feature:6495976-6551687:1:exon
subclass of: SO_0000010

119421439
type: Gene
SIO_000068: ncbigene

position:6495976:1
position: 6495976
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6551687:1
position: 6551687
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6495976-6551687:1:exon

glyr1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 451745
gene: glyr1
product: glyoxylate reductase 1 homolog (Arabidopsis)
inference: similar to RNA sequence (same species):INSD:GELZ01036334.1
exception: annotated by transcript or proteomic data
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: added 213 bases not found in genome assembly; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_037688792.1
SIO_010081: glyr1
subclass of: SO_0000673
so part of: glyr1
location: join(6495976..6496133,6502575..6502611,6502693..6502772,6502855..6502993,6503372..6503482,6525108..6525191,6527952..6528005,6530576..6530626,6530700..6530773,6530898..>6530997,<6540109..6540271,6541796..6541975,6542273..6542397,6550607..6551687)
location: region:6495976-6551687:1
so has part: feature:6495976-6496133:1:exon
so has part: feature:6502575-6502611:1:exon
so has part: feature:6502693-6502772:1:exon
so has part: feature:6502855-6502993:1:exon
so has part: feature:6503372-6503482:1:exon
so has part: feature:6525108-6525191:1:exon
so has part: feature:6527952-6528005:1:exon
so has part: feature:6530576-6530626:1:exon
so has part: feature:6530700-6530773:1:exon
so has part: feature:6530898-6530997:1:exon
so has part: feature:6540109-6540271:1:exon
so has part: feature:6541796-6541975:1:exon
so has part: feature:6542273-6542397:1:exon
so has part: feature:6550607-6551687:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6495976-6496133:1:exon

position:6496133:1
position: 6496133
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:6502575-6502611:1:exon

position:6502575:1
position: 6502575
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6502611:1
position: 6502611
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:6502693-6502772:1:exon

position:6502693:1
position: 6502693
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6502772:1
position: 6502772
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:6502855-6502993:1:exon

position:6502855:1
position: 6502855
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6502993:1
position: 6502993
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:6503372-6503482:1:exon

position:6503372:1
position: 6503372
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6503482:1
position: 6503482
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:6525108-6525191:1:exon

position:6525108:1
position: 6525108
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6525191:1
position: 6525191
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:6527952-6528005:1:exon

position:6527952:1
position: 6527952
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6528005:1
position: 6528005
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:6530576-6530626:1:exon

position:6530576:1
position: 6530576
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6530626:1
position: 6530626
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:6530700-6530773:1:exon

position:6530700:1
position: 6530700
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6530773:1
position: 6530773
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:6530898-6530997:1:exon

position:6530898:1
position: 6530898
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6530997:1
position: 6530997
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 11
SIO_000628: feature:6540109-6540271:1:exon

position:6540109:1
position: 6540109
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

position:6540271:1
position: 6540271
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:6541796-6541975:1:exon

position:6541796:1
position: 6541796
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6541975:1
position: 6541975
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:6542273-6542397:1:exon

position:6542273:1
position: 6542273
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6542397:1
position: 6542397
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:6550607-6551687:1:exon

position:6550607:1
position: 6550607
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

glyr1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 451745
gene: glyr1
inference: similar to RNA sequence (same species):INSD:GELZ01036334.1
exception: annotated by transcript or proteomic data
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: added 213 bases not found in genome assembly; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: putative oxidoreductase GLYR1
translation: MAAVHLRIGDLVWGKLGRYPPWPGKVVSPPKDLKKPRGKKCHFVKFFGTEDHAWIKVEQLKPYHAHKEEMIKINKGKRFQQAVDAVEDYLKKAKGKEQNSEGKAESKGKKASNKPLKILDEDDEDLSALKDPSEKDLTDSDPEPSAIERLGAGPGSGFKWESSTVKNDPHFHHFLLSQSEKPASSMEPISKRLKIIEEVTGSTSIQAADSTAINGSITPTDKRIGFLGLGLMGSGIVSNLLKMGHVVTVWNRTAEKCDLFIQEGARLGRTPAEVASMCDITFSCVSDPKAARDLVMGPSGVLQGIRPGKCYVEMSTVDPETITELSQVITSRGGRFLEAPVSGSQQLSNEGMLVILAAGDRTVYEDCSSCFQAMGKTSFFLGEAGNASKMMLILNMVQGSFMATIAEGLTLAQATGQSQQTFLDILCQGQMASTFVDQKCQNILQGNFKPDYYLKHIQKDLRLAISMGDMANHPTPMAAAANEVYKRAKALDQSDNDISAVYRAYIH
SIO_010081: glyr1
subclass of: SO_0000673
so part of: glyr1
location: join(6496096..6496133,6502575..6502611,6502693..6502772,6502855..6502993,6503372..6503482,6525108..6525191,6527952..6528005,6530576..6530626,6530700..6530773,6530898..>6530997,<6540109..6540271,6541796..6541975,6542273..6542397,6550607..6550681)
location: region:6496096-6550681:1
so has part: feature:6496096-6496133:1:exon
so has part: feature:6502575-6502611:1:exon
so has part: feature:6502693-6502772:1:exon
so has part: feature:6502855-6502993:1:exon
so has part: feature:6503372-6503482:1:exon
so has part: feature:6525108-6525191:1:exon
so has part: feature:6527952-6528005:1:exon
so has part: feature:6530576-6530626:1:exon
so has part: feature:6530700-6530773:1:exon
so has part: feature:6530898-6530997:1:exon
so has part: feature:6540109-6540271:1:exon
so has part: feature:6541796-6541975:1:exon
so has part: feature:6542273-6542397:1:exon
so has part: feature:6550607-6550681:1:exon

XP_037544720.1
type: Protein
SIO_000068: ncbiprotein

position:6496096:1
position: 6496096
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6550681:1
position: 6550681
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6496096-6496133:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6502575-6502611:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6502693-6502772:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6502855-6502993:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6503372-6503482:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:6525108-6525191:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:6527952-6528005:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:6530576-6530626:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:6530700-6530773:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:6530898-6530997:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:6540109-6540271:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:6541796-6541975:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:6542273-6542397:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:6550607-6550681:1:exon

rab11fip4a
type: Gene
subclass of: SO_0000704
RO_0002162: 451745
gene: rab11fip4a
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 6695014..6885049
location: region:6695014-6885049:1
so has part: feature:6695014-6885049:1:exon
subclass of: SO_0000010

119421440
type: Gene
SIO_000068: ncbigene

position:6695014:1
position: 6695014
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6885049:1
position: 6885049
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6695014-6885049:1:exon

rab11fip4a
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 451745
gene: rab11fip4a
product: RAB11 family interacting protein 4 (class II) a
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 13 Proteins, and 94% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_037688793.1
SIO_010081: rab11fip4a
subclass of: SO_0000673
so part of: rab11fip4a
location: join(6695014..6695289,6706971..6707058,6769892..6769980,6804089..6804213,6804301..6804462,6826433..6826567,6828894..6828929,6829042..6829150,6832105..6832208,6862421..6862561,6862980..6863061,6880997..6881134,6881219..6881365,6883097..6883240,6884933..6885049)
location: region:6695014-6885049:1
so has part: feature:6695014-6695289:1:exon
so has part: feature:6706971-6707058:1:exon
so has part: feature:6769892-6769980:1:exon
so has part: feature:6804089-6804213:1:exon
so has part: feature:6804301-6804462:1:exon
so has part: feature:6826433-6826567:1:exon
so has part: feature:6828894-6828929:1:exon
so has part: feature:6829042-6829150:1:exon
so has part: feature:6832105-6832208:1:exon
so has part: feature:6862421-6862561:1:exon
so has part: feature:6862980-6863061:1:exon
so has part: feature:6880997-6881134:1:exon
so has part: feature:6881219-6881365:1:exon
so has part: feature:6883097-6883240:1:exon
so has part: feature:6884933-6885049:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6695014-6695289:1:exon

position:6695289:1
position: 6695289
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:6706971-6707058:1:exon

position:6706971:1
position: 6706971
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6707058:1
position: 6707058
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:6769892-6769980:1:exon

position:6769892:1
position: 6769892
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6769980:1
position: 6769980
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:6804089-6804213:1:exon

position:6804089:1
position: 6804089
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6804213:1
position: 6804213
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:6804301-6804462:1:exon

position:6804301:1
position: 6804301
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6804462:1
position: 6804462
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:6826433-6826567:1:exon

position:6826433:1
position: 6826433
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6826567:1
position: 6826567
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:6828894-6828929:1:exon

position:6828894:1
position: 6828894
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6828929:1
position: 6828929
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:6829042-6829150:1:exon

position:6829042:1
position: 6829042
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6829150:1
position: 6829150
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:6832105-6832208:1:exon

position:6832105:1
position: 6832105
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6832208:1
position: 6832208
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:6862421-6862561:1:exon

position:6862421:1
position: 6862421
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6862561:1
position: 6862561
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:6862980-6863061:1:exon

position:6862980:1
position: 6862980
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6863061:1
position: 6863061
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:6880997-6881134:1:exon

position:6880997:1
position: 6880997
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6881134:1
position: 6881134
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:6881219-6881365:1:exon

position:6881219:1
position: 6881219
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6881365:1
position: 6881365
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:6883097-6883240:1:exon

position:6883097:1
position: 6883097
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6883240:1
position: 6883240
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:6884933-6885049:1:exon

position:6884933:1
position: 6884933
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

rab11fip4a
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 451745
gene: rab11fip4a
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: rab11 family-interacting protein 4A
translation: MERPVSPDQEQLWQFLRRLKEVFDVCDEDADGFIRVEHLVNLGLQFGQGDEVKKLKKHLSPNVHGKINFKDFCHAVFAMKGCEEILKMAVVPLSLTPRQQSVTDNGYIYQNSEAKLGPPRVTSMRSYPECDMNSSTENSNSSDSLDTPQQNRHLGGSASAPVIAKEEQFEDYGEGVDVDFTPSSPRPEDESRTNGFSDLGSSLPSSAGHTPQKIQHLSNSDLLDIYCSQCCKKVNLLNDLEARLRNLKANSPNRQISSTAFGRQLFQANHSVFGSSQDSSTEDLFTDSIDSCDLDITEKVSYLEKKVTELESDSLVNSDVKSKLKQENTQLVHRVHELEEQVKDAETKAAENLQDETRRHREAYTKLDRDRNTEIDLLCNRMQQLEEENGEMTLNVCRLKSQSEKLDQEKQRMTEQMEDTSLRLRDEMDLYRTIMDKLWHNRHLFQKEKESMQELIDDLRREVEYLQLFKLELEHPGKGKGLSEINAKARELEMEHEVKRLKQENFKLRDQNDDLNAQILSLSLYEAKNLFSCHSKAQCLAAEIDNASRDELVDAMKEQEEINLRLRQYMDKIILAILDHNPSILEIKT
SIO_010081: rab11fip4a
subclass of: SO_0000673
so part of: rab11fip4a
location: join(6695137..6695289,6706971..6707058,6769892..6769980,6804089..6804213,6804301..6804462,6826433..6826567,6828894..6828929,6829042..6829150,6832105..6832208,6862421..6862561,6862980..6863061,6880997..6881134,6881219..6881365,6883097..6883240,6884933..6885049)
location: region:6695137-6885049:1
so has part: feature:6695137-6695289:1:exon
so has part: feature:6706971-6707058:1:exon
so has part: feature:6769892-6769980:1:exon
so has part: feature:6804089-6804213:1:exon
so has part: feature:6804301-6804462:1:exon
so has part: feature:6826433-6826567:1:exon
so has part: feature:6828894-6828929:1:exon
so has part: feature:6829042-6829150:1:exon
so has part: feature:6832105-6832208:1:exon
so has part: feature:6862421-6862561:1:exon
so has part: feature:6862980-6863061:1:exon
so has part: feature:6880997-6881134:1:exon
so has part: feature:6881219-6881365:1:exon
so has part: feature:6883097-6883240:1:exon
so has part: feature:6884933-6885049:1:exon

XP_037544721.1
type: Protein
SIO_000068: ncbiprotein

position:6695137:1
position: 6695137
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6695137-6695289:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6706971-6707058:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6769892-6769980:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6804089-6804213:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6804301-6804462:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:6826433-6826567:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:6828894-6828929:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:6829042-6829150:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:6832105-6832208:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:6862421-6862561:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:6862980-6863061:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:6880997-6881134:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:6881219-6881365:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:6883097-6883240:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:6884933-6885049:1:exon

igf2bp1
type: Gene
subclass of: SO_0000704
RO_0002162: 451745
gene: igf2bp1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 7047635..7131749
location: region:7047635-7131749:1
so has part: feature:7047635-7131749:1:exon
subclass of: SO_0000010

119421441
type: Gene
SIO_000068: ncbigene

position:7047635:1
position: 7047635
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7131749:1
position: 7131749
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7047635-7131749:1:exon

igf2bp1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 451745
gene: igf2bp1
product: insulin-like growth factor 2 mRNA binding protein 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 35 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_037688794.1
SIO_010081: igf2bp1
subclass of: SO_0000673
so part of: igf2bp1
location: join(7047635..7048174,7048745..7048805,7101592..7101640,7106043..7106094,7108784..7108847,7110211..7110504,7111137..7111271,7111351..7111473,7111572..7111707,7115863..7115985,7117883..7117999,7122629..7122703,7122832..7122963,7123086..7123199,7130094..7131749)
location: region:7047635-7131749:1
so has part: feature:7047635-7048174:1:exon
so has part: feature:7048745-7048805:1:exon
so has part: feature:7101592-7101640:1:exon
so has part: feature:7106043-7106094:1:exon
so has part: feature:7108784-7108847:1:exon
so has part: feature:7110211-7110504:1:exon
so has part: feature:7111137-7111271:1:exon
so has part: feature:7111351-7111473:1:exon
so has part: feature:7111572-7111707:1:exon
so has part: feature:7115863-7115985:1:exon
so has part: feature:7117883-7117999:1:exon
so has part: feature:7122629-7122703:1:exon
so has part: feature:7122832-7122963:1:exon
so has part: feature:7123086-7123199:1:exon
so has part: feature:7130094-7131749:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:7047635-7048174:1:exon

position:7048174:1
position: 7048174
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:7048745-7048805:1:exon

position:7048745:1
position: 7048745
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7048805:1
position: 7048805
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:7101592-7101640:1:exon

position:7101592:1
position: 7101592
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7101640:1
position: 7101640
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:7106043-7106094:1:exon

position:7106043:1
position: 7106043
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7106094:1
position: 7106094
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:7108784-7108847:1:exon

position:7108784:1
position: 7108784
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7108847:1
position: 7108847
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:7110211-7110504:1:exon

position:7110211:1
position: 7110211
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7110504:1
position: 7110504
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:7111137-7111271:1:exon

position:7111137:1
position: 7111137
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7111271:1
position: 7111271
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:7111351-7111473:1:exon

position:7111351:1
position: 7111351
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7111473:1
position: 7111473
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:7111572-7111707:1:exon

position:7111572:1
position: 7111572
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7111707:1
position: 7111707
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:7115863-7115985:1:exon

position:7115863:1
position: 7115863
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7115985:1
position: 7115985
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:7117883-7117999:1:exon

position:7117883:1
position: 7117883
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7117999:1
position: 7117999
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:7122629-7122703:1:exon

position:7122629:1
position: 7122629
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7122703:1
position: 7122703
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:7122832-7122963:1:exon

position:7122832:1
position: 7122832
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7122963:1
position: 7122963
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:7123086-7123199:1:exon

position:7123086:1
position: 7123086
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7123199:1
position: 7123199
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:7130094-7131749:1:exon

position:7130094:1
position: 7130094
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

igf2bp1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 451745
gene: igf2bp1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: insulin-like growth factor 2 mRNA-binding protein 1
translation: MHKLYIGNLGDSVTAEDLIKTFDEHKIPYSGQFLMKNGYAFVDCPDDQWAMKAIETFSGKVELHGKRIEVEHSVPKKQRTRKLQIRNIPPHLQWEVLDGLLAQCGTVENCEQVNTESETAVVNVTYASREHARQAIQKLNGYQLENNTLRVSYIPDETSDMEGGQRGPDNGRRPGYGPRGGPRGGSPSSGMPPKTPHADIPLRLLVPTQYVGAIIGKEGATIRNITKQTQSKIDVHRKENAGAAEKPISIHSTPEGCSAACRMILEIMHQEAKDTKTADEVPLKVLAHNNFVGRLIGKEGRNLKKVEQDTDTKITISPLQDLTLYNPERTITVKGSIDACCLAEVEIMKKVREAYENDIAAMNQQTHLIPGLNLGALGLFPPSSNMPPPPPGNSAGSAPYGSFGTPEQETVHVYIPAQAVGAIIGKKGQHIKQLSRFAGASIKIAPAETPDSKMRMVIVTGPPEAQFKAQGRIYGKLKEENFFGPKEEVKLETHIKMAAAAAGRVIGKGGKTVNELQNLTAAEVVVPREQTPDENDQVIVKINGHFYASQLAQRKIRDILTQVKMSQKGGMGMSASPHPQGFTEMGSPTQGLTQDHQPRRK
SIO_010081: igf2bp1
subclass of: SO_0000673
so part of: igf2bp1
location: join(7048000..7048174,7048745..7048805,7101592..7101640,7106043..7106094,7108784..7108847,7110211..7110504,7111137..7111271,7111351..7111473,7111572..7111707,7115863..7115985,7117883..7117999,7122629..7122703,7122832..7122963,7123086..7123199,7130094..7130249)
location: region:7048000-7130249:1
so has part: feature:7048000-7048174:1:exon
so has part: feature:7048745-7048805:1:exon
so has part: feature:7101592-7101640:1:exon
so has part: feature:7106043-7106094:1:exon
so has part: feature:7108784-7108847:1:exon
so has part: feature:7110211-7110504:1:exon
so has part: feature:7111137-7111271:1:exon
so has part: feature:7111351-7111473:1:exon
so has part: feature:7111572-7111707:1:exon
so has part: feature:7115863-7115985:1:exon
so has part: feature:7117883-7117999:1:exon
so has part: feature:7122629-7122703:1:exon
so has part: feature:7122832-7122963:1:exon
so has part: feature:7123086-7123199:1:exon
so has part: feature:7130094-7130249:1:exon

XP_037544722.1
type: Protein
SIO_000068: ncbiprotein

position:7048000:1
position: 7048000
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7130249:1
position: 7130249
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7048000-7048174:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7048745-7048805:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7101592-7101640:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7106043-7106094:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:7108784-7108847:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:7110211-7110504:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:7111137-7111271:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:7111351-7111473:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:7111572-7111707:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:7115863-7115985:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:7117883-7117999:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:7122629-7122703:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:7122832-7122963:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:7123086-7123199:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:7130094-7130249:1:exon

hoxb9a
type: Gene
subclass of: SO_0000704
RO_0002162: 451745
gene: hoxb9a
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 7362838..7387421
location: region:7362838-7387421:1
so has part: feature:7362838-7387421:1:exon
subclass of: SO_0000010

119422019
type: Gene
SIO_000068: ncbigene

position:7362838:1
position: 7362838
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7387421:1
position: 7387421
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7362838-7387421:1:exon

hoxb9a
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 451745
gene: hoxb9a
product: homeobox B9a
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 19 Proteins, and 57% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_037689360.1
SIO_010081: hoxb9a
subclass of: SO_0000673
so part of: hoxb9a
location: join(7362838..7363423,7387130..7387421)
location: region:7362838-7387421:1
so has part: feature:7362838-7363423:1:exon
so has part: feature:7387130-7387421:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:7362838-7363423:1:exon

position:7363423:1
position: 7363423
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:7387130-7387421:1:exon

position:7387130:1
position: 7387130
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

hoxb9a
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 451745
gene: hoxb9a
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: homeobox protein Hox-B9a
translation: MSISGTLSNYYVDSIISPEGDELSGPARFPGVQYSGSSSAVSASGRQPVGAAHVDPSEPYPSCSFQPKPPVFSSSWGSFGPHHSVGGLSAVYHPYLPAQHVPAAETRYLRSWLECAPRDSDPGPSQANQVKLEPQLGHKGGEIPLKPSGQHQHETTTYIFESARELSHHPAAGAGPGFEDKDVCDGSKDKDSVDQNDPSANWLHARSSRKKRCPYTKYQTLELEKEFLFNMYLTRDRRHEVARALSLTERQVKIWFQNRRMKMKKQSKDQPNKE
SIO_010081: hoxb9a
subclass of: SO_0000673
so part of: hoxb9a
location: join(7362838..7363423,7387130..7387368)
location: region:7362838-7387368:1
so has part: feature:7362838-7363423:1:exon
so has part: feature:7387130-7387368:1:exon

XP_037545288.1
type: Protein
SIO_000068: ncbiprotein

position:7387368:1
position: 7387368
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7362838-7363423:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7387130-7387368:1:exon

hoxb8a
type: Gene
subclass of: SO_0000704
RO_0002162: 451745
gene: hoxb8a
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 7410371..7414023
location: region:7410371-7414023:1
so has part: feature:7410371-7414023:1:exon
subclass of: SO_0000010

119422020
type: Gene
SIO_000068: ncbigene

position:7410371:1
position: 7410371
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7414023:1
position: 7414023
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7410371-7414023:1:exon

hoxb8a
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 451745
gene: hoxb8a
product: homeobox B8a
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 32 Proteins, and 79% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_037689361.1
SIO_010081: hoxb8a
subclass of: SO_0000673
so part of: hoxb8a
location: join(7410371..7410803,7413648..7414023)
location: region:7410371-7414023:1
so has part: feature:7410371-7410803:1:exon
so has part: feature:7413648-7414023:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:7410371-7410803:1:exon

position:7410803:1
position: 7410803
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:7413648-7414023:1:exon

position:7413648:1
position: 7413648
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

hoxb8a
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 451745
gene: hoxb8a
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: homeobox protein Hox-B8a
translation: MSSYFVNSLFSKYKSGDSLRPNYYECGFAQELGGSRPTVVYGPGSGATFQHAQQIQDFYHHGASSLPSNPYQQSPCAVTCHGEPGNFYGYDALQRQTLFGAQDSDLVQYSDCKLGGATGLGGEDTDGTEQSPSPTQLFPWMRPQAAGRRRGRQTYSRYQTLELEKEFLFNPYLTRKRRIEVSHALALTERQVKIWFQNRRMKWKKENNKDKFPSSKSEQEAVERERREKELRESGGGGGEGDGGAGAVGAQGPASEDCCEKAHKQM
SIO_010081: hoxb8a
subclass of: SO_0000673
so part of: hoxb8a
location: join(7410371..7410803,7413648..7414015)
location: region:7410371-7414015:1
so has part: feature:7410371-7410803:1:exon
so has part: feature:7413648-7414015:1:exon

XP_037545289.1
type: Protein
SIO_000068: ncbiprotein

position:7414015:1
position: 7414015
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7410371-7410803:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7413648-7414015:1:exon

LOC119422021
type: Gene
subclass of: SO_0000704
RO_0002162: 451745
gene: LOC119422021
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(7563524..7565937)
location: region:7563524-7565937:-1
so has part: feature:7563524-7565937:-1:exon
subclass of: SO_0000010

119422021
type: Gene
SIO_000068: ncbigene

position:7563524:-1
position: 7563524
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7565937:-1
position: 7565937
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7563524-7565937:-1:exon

LOC119422021
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 451745
gene: LOC119422021
product: uncharacterized LOC119422021
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_037689362.1
SIO_010081: LOC119422021
subclass of: SO_0000673
so part of: LOC119422021
location: complement(join(7563524..7563967,7564812..7565937))
location: region:7563524-7565937:-1
so has part: feature:7564812-7565937:-1:exon
so has part: feature:7563524-7563967:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:7564812-7565937:-1:exon

position:7564812:-1
position: 7564812
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:7563524-7563967:-1:exon

position:7563967:-1
position: 7563967
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC119422021
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 451745
gene: LOC119422021
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC119422021
translation: MKCAFKVHMPQSDDSESEEEHLDDEHLWEDINSQEDTELPWSSGARLSCFAHSLQLVVNDGMKEVKAISHTIAKTSRFTTLLHSSSQFKDKFEATFGTNRTIPAANTTRWNSIFKQVQAFTALDHKALNEMCSKDHEELVFSAREWNQLKELSAVLAPFSEVTDLTEGEKSVTISMVVPTVLDLNTHLLKMEDTRMQCQSLVRALQQSLVKRFSGIFLKTSMAKDSGREEPFNHNVYFLATMLDPQFGLSWVDLDVTNGGNSTSVKKFRDELKKTLTETLILEVEKMMDMKEDTCSEVVNVDPAAASDSPPNKYPRLLSRYKAYKKHSSDQDSSIHTQIRKYFDAIRDFDTDNALVFWAKNHTRFPQLHNLAMKVLSVPASSAPVERVFSRGGILMRPHRARLGHRMLQSLIFLKCNETLL
SIO_010081: LOC119422021
subclass of: SO_0000673
so part of: LOC119422021
location: complement(join(7563534..7563967,7564812..7565643))
location: region:7563534-7565643:-1
so has part: feature:7564812-7565643:-1:exon
so has part: feature:7563534-7563967:-1:exon

XP_037545290.1
type: Protein
SIO_000068: ncbiprotein

position:7563534:-1
position: 7563534
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7565643:-1
position: 7565643
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7564812-7565643:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7563534-7563967:-1:exon

hoxb6a
type: Gene
subclass of: SO_0000704
RO_0002162: 451745
gene: hoxb6a
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 7602805..7604641
location: region:7602805-7604641:1
so has part: feature:7602805-7604641:1:exon
subclass of: SO_0000010

119422022
type: Gene
SIO_000068: ncbigene

position:7602805:1
position: 7602805
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7604641:1
position: 7604641
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7602805-7604641:1:exon

hoxb6a
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 451745
gene: hoxb6a
product: homeobox B6a
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 41 Proteins, and 88% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_037689363.1
SIO_010081: hoxb6a
subclass of: SO_0000673
so part of: hoxb6a
location: join(7602805..7603362,7604310..7604641)
location: region:7602805-7604641:1
so has part: feature:7602805-7603362:1:exon
so has part: feature:7604310-7604641:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:7602805-7603362:1:exon

position:7603362:1
position: 7603362
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:7604310-7604641:1:exon

position:7604310:1
position: 7604310
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

hoxb6a
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 451745
gene: hoxb6a
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: homeobox protein Hox-B6a
translation: MSSYFVNSSFIPGAGGGGQAAADPPFLGQISLYSSGYTDHPLRHYTGAAAVAYSAGGADKAYPGSIYQQAAGGAYSGHRAGVGVVGGAAGAAACDYVAAAAAAATNFYRDKEPSSLEELAVSQDGMHRKLDCGGLAGKGLFVDTMDDKQTSTPIYPWMQRMNACNGSFGSPGRRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKENKLINSSSSSSSSTVNGTDEEEKPTD
SIO_010081: hoxb6a
subclass of: SO_0000673
so part of: hoxb6a
location: join(7602867..7603362,7604310..7604584)
location: region:7602867-7604584:1
so has part: feature:7602867-7603362:1:exon
so has part: feature:7604310-7604584:1:exon

XP_037545291.1
type: Protein
SIO_000068: ncbiprotein

position:7602867:1
position: 7602867
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7604584:1
position: 7604584
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7602867-7603362:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7604310-7604584:1:exon

hoxb5a
type: Gene
subclass of: SO_0000704
RO_0002162: 451745
gene: hoxb5a
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 7612655..>7614200
location: region:7612655-7614200:1
so has part: feature:7612655-7614200:1:exon
subclass of: SO_0000010

119422023
type: Gene
SIO_000068: ncbigene

position:7612655:1
position: 7612655
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7614200:1
position: 7614200
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7612655-7614200:1:exon

hoxb5a
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 451745
gene: hoxb5a
product: homeobox B5a
inference: similar to RNA sequence (same species):INSD:GELZ01022165.1
exception: annotated by transcript or proteomic data
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: added 148 bases not found in genome assembly; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 38 Proteins, and 58% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_037689364.1
SIO_010081: hoxb5a
subclass of: SO_0000673
so part of: hoxb5a
location: join(7612655..7613273,7614011..>7614200)
location: region:7612655-7614200:1
so has part: feature:7612655-7613273:1:exon
so has part: feature:7614011-7614200:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:7612655-7613273:1:exon

position:7613273:1
position: 7613273
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:7614011-7614200:1:exon

position:7614011:1
position: 7614011
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

hoxb5a
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 451745
gene: hoxb5a
inference: similar to RNA sequence (same species):INSD:GELZ01022165.1
exception: annotated by transcript or proteomic data
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: added 85 bases not found in genome assembly; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: homeobox protein Hox-B5a
translation: MSSYFVNSFSGRYPNGPDYQLLTYGAGGDAASGAAFRDSAATMNHATGSYGYGYNGMDLTVTSRGGGGGTRTGGTGGHFGEDSGGFSVRQSSFSVTPGTNSLLTADRESSRLSSSPPAEKTGNGSLSSPNLSSLSSAVQRFTELDDASPGAKEPNRDPSLGRNPPPASGLSFQKEEGGPAGPAGSAVTEAHPPQIFPWMRKLHISHDITNPDGKRARTAYTRYQTLELEKEFHFNRYLTRRRRIEIAHTLCLSERQIKIWFQNRRMKWKKENKLINSSSSSSSSTVNGTDEEEKPTD
SIO_010081: hoxb5a
subclass of: SO_0000673
so part of: hoxb5a
location: join(7612655..7613273,7614011..>7614200)
location: region:7612655-7614200:1
so has part: feature:7612655-7613273:1:exon
so has part: feature:7614011-7614200:1:exon

XP_037545292.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:7612655-7613273:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7614011-7614200:1:exon

hoxb4a
type: Gene
subclass of: SO_0000704
RO_0002162: 451745
gene: hoxb4a
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 7627174..7629681
location: region:7627174-7629681:1
so has part: feature:7627174-7629681:1:exon
subclass of: SO_0000010

119421442
type: Gene
SIO_000068: ncbigene

position:7627174:1
position: 7627174
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7629681:1
position: 7629681
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7627174-7629681:1:exon

hoxb4a
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 451745
gene: hoxb4a
product: homeobox B4a
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 57 Proteins, and 66% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_037688795.1
SIO_010081: hoxb4a
subclass of: SO_0000673
so part of: hoxb4a
location: join(7627174..7627600,7628997..7629681)
location: region:7627174-7629681:1
so has part: feature:7627174-7627600:1:exon
so has part: feature:7628997-7629681:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:7627174-7627600:1:exon

position:7627600:1
position: 7627600
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:7628997-7629681:1:exon

position:7628997:1
position: 7628997
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

hoxb4a
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 451745
gene: hoxb4a
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: homeobox protein Hox-B4a
translation: MNSYLINSNYVDPKFPPCEEYSQSDYLPSHSPDYYSSQRQEPSAFQPDSLYPPQSPHRAEPPYMPCQRAAQPASVVMSPRDHVALPTTVSEQSHRCDTVTPSPPPPPPPPPLSCGQSASSPRSARKDPPVVYPWMKKVHVNIVNSSYSGGEPKRSRTAYTRQQVLELEKEFHYNRYLTRRRRVEIAHTLCLSERQIKIWFQNRRMKWKKDHKLPNTKVRSGPNGTTCSQTMAGSAGPL
SIO_010081: hoxb4a
subclass of: SO_0000673
so part of: hoxb4a
location: join(7627174..7627600,7628997..7629286)
location: region:7627174-7629286:1
so has part: feature:7627174-7627600:1:exon
so has part: feature:7628997-7629286:1:exon

XP_037544723.1
type: Protein
SIO_000068: ncbiprotein

position:7629286:1
position: 7629286
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7627174-7627600:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7628997-7629286:1:exon

hoxb3a
type: Gene
subclass of: SO_0000704
RO_0002162: 451745
gene: hoxb3a
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 7670729..7688174
location: region:7670729-7688174:1
so has part: feature:7670729-7688174:1:exon
subclass of: SO_0000010

119422025
type: Gene
SIO_000068: ncbigene

position:7670729:1
position: 7670729
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7688174:1
position: 7688174
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7670729-7688174:1:exon

hoxb3a
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 451745
gene: hoxb3a
product: homeobox B3a
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 17 Proteins, and 96% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_037689365.1
SIO_010081: hoxb3a
subclass of: SO_0000673
so part of: hoxb3a
location: join(7670729..7670787,7678648..7679342,7687315..7688174)
location: region:7670729-7688174:1
so has part: feature:7670729-7670787:1:exon
so has part: feature:7678648-7679342:1:exon
so has part: feature:7687315-7688174:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:7670729-7670787:1:exon

position:7670787:1
position: 7670787
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:7678648-7679342:1:exon

position:7678648:1
position: 7678648
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7679342:1
position: 7679342
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:7687315-7688174:1:exon

position:7687315:1
position: 7687315
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

hoxb3a
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 451745
gene: hoxb3a
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: homeobox protein Hox-B3a
translation: MQKTTYYDNSPTLFGGYSSYQVQGAGAAPANGFGGYDAPVSVSHQQPAFQSATHLDVESYQHSACSLQSLGSNGGHQQQLAKTKELNGNCMRPSLPPEHHPAAQVSPPLPPNPSNGSATAPQPGGSTGPSAVSKSGLNKSSISSSSSSSSTSSSSSLPPNPTLAKQIFPWMKECRQTIKQKNGSPSNNSGNASAGTESGSGGEKSPTGGSSASSKRARTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLSERQIKIWFQNRRMKYKKDQKSKGLSSSSGGPSPTGSPPLPMQSSASFLNSMHPMGGGGGGVPAYDTPSPPTFGKLHQGVSYSMSTAYSNVPMKGCPTQKYGAPDPDYGDPHHSLVQSNNAGYGTPTNMQASPVYVGGGSYVEPMPGSGPSMYGLNHLGPTPPHHQNMDYNVGGSMSTANQHHVGGGGPQGPCDPPTHPTYTELSAHHTSTQGRIQEAPKLTHL
SIO_010081: hoxb3a
subclass of: SO_0000673
so part of: hoxb3a
location: join(7678769..7679342,7687315..7688174)
location: region:7678769-7688174:1
so has part: feature:7678769-7679342:1:exon
so has part: feature:7687315-7688174:1:exon

XP_037545293.1
type: Protein
SIO_000068: ncbiprotein

position:7678769:1
position: 7678769
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7678769-7679342:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7687315-7688174:1:exon

hoxb2a
type: Gene
subclass of: SO_0000704
RO_0002162: 451745
gene: hoxb2a
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 7693748..7696276
location: region:7693748-7696276:1
so has part: feature:7693748-7696276:1:exon
subclass of: SO_0000010

119422026
type: Gene
SIO_000068: ncbigene

position:7693748:1
position: 7693748
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7696276:1
position: 7696276
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7693748-7696276:1:exon

hoxb2a
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 451745
gene: hoxb2a
product: homeobox B2a
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 45 Proteins, and 68% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_037689366.1
SIO_010081: hoxb2a
subclass of: SO_0000673
so part of: hoxb2a
location: join(7693748..7694268,7695460..7696276)
location: region:7693748-7696276:1
so has part: feature:7693748-7694268:1:exon
so has part: feature:7695460-7696276:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:7693748-7694268:1:exon

position:7694268:1
position: 7694268
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:7695460-7696276:1:exon

position:7695460:1
position: 7695460
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

hoxb2a
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 451745
gene: hoxb2a
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: homeobox protein Hox-B2a
translation: MNFEFEREIGFINSQPSLAECLTSFPATLDSFQTSSIKESTGIPPPFEHTIPSLSPCTRSQPKPASGSQQNRRSSDTNGHQTHHRAAQQPCAPGQAPPAPATPAGPLAHEFPWMKEKKSSKKGPKPGGSSAIITPASSYPSPSASGYAAAGVDSPTADPSSQPGLDLGGAGSRRLRTAYTNTQLLELEKEFHFNKYLCRPRRVEIAALLDLTERQVKVWFQNRRMKHKRQTTHHRDGSAGSPSSGFEPLEGADASSPYSSQPLEASGSGESTEGDQGCGSMSASGDNAQPTLEDTDRVSLPERPQLPGTSGSPDSPPSVIRSSEHSEAGPPAAPVAPSDPHGTCVLPDLTLFGEDACLSPSLQSSLDSPVDFSEEDFDLFTSTLCTIDLQHLNF
SIO_010081: hoxb2a
subclass of: SO_0000673
so part of: hoxb2a
location: join(7693800..7694268,7695460..7696175)
location: region:7693800-7696175:1
so has part: feature:7693800-7694268:1:exon
so has part: feature:7695460-7696175:1:exon

XP_037545294.1
type: Protein
SIO_000068: ncbiprotein

position:7693800:1
position: 7693800
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7696175:1
position: 7696175
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7693800-7694268:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7695460-7696175:1:exon

hoxb1a
type: Gene
subclass of: SO_0000704
RO_0002162: 451745
gene: hoxb1a
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 7740556..7742798
location: region:7740556-7742798:1
so has part: feature:7740556-7742798:1:exon
subclass of: SO_0000010

119422027
type: Gene
SIO_000068: ncbigene

position:7740556:1
position: 7740556
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7742798:1
position: 7742798
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7740556-7742798:1:exon

hoxb1a
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 451745
gene: hoxb1a
product: homeobox B1a
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 19 Proteins, and 7% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_037689367.1
SIO_010081: hoxb1a
subclass of: SO_0000673
so part of: hoxb1a
location: join(7740556..7741372,7742452..7742798)
location: region:7740556-7742798:1
so has part: feature:7740556-7741372:1:exon
so has part: feature:7742452-7742798:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:7740556-7741372:1:exon

position:7741372:1
position: 7741372
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:7742452-7742798:1:exon

position:7742452:1
position: 7742452
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

hoxb1a
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 451745
gene: hoxb1a
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: homeobox protein Hox-B1a
translation: MDNMNSFVEYSICNRPRTGAYPAPKPAYHHHHVHLALDQHHALSVTSSSLPAGLPGSSVAGPGGDSGYSADGGVYGNTRADIGATHESRGGSQYNQHQSNRFEQHQYAPSGFQPHSNLQQNQSLQSGLLSSYSNGGGGSAGDYVGHACATSSEYISVMGPSNSIQPQYFMEEAAASSYYHQPSFHSSAPAVGASYNALPEAYCGPQGALSTSQFSHQIGGGPDAGGYQGLHAGGYVELSVSQERERGGEDGLQTGQGQTFDWMKVKRNPPKTVKIADFGLSGNNSNVIRTNFSTRQLTELEKEFHFSKYLTRARRVEIAATLELNETQVKIWFQNRRMKQKKREREGACTTTRSSASETGGCFVKELEDTDHSSVSTSPGASPSSET
SIO_010081: hoxb1a
subclass of: SO_0000673
so part of: hoxb1a
location: join(7740556..7741372,7742452..7742798)
location: region:7740556-7742798:1
so has part: feature:7740556-7741372:1:exon
so has part: feature:7742452-7742798:1:exon

XP_037545295.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:7740556-7741372:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7742452-7742798:1:exon

LOC119422028
type: Gene
subclass of: SO_0000704
RO_0002162: 451745
gene: LOC119422028
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 8399241..8401150
location: region:8399241-8401150:1
so has part: feature:8399241-8401150:1:exon
subclass of: SO_0000011

119422028
type: Gene
SIO_000068: ncbigene

position:8399241:1
position: 8399241
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8401150:1
position: 8401150
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8399241-8401150:1:exon

LOC119422028
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 451745
nc RNA class: lncRNA
gene: LOC119422028
product: uncharacterized LOC119422028
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XR_005187393.1
SIO_010081: LOC119422028
subclass of: SO_0000673
so part of: LOC119422028
location: join(8399241..8399430,8399915..8400007,8400380..8400476,8400559..8401150)
location: region:8399241-8401150:1
so has part: feature:8399241-8399430:1:exon
so has part: feature:8399915-8400007:1:exon
so has part: feature:8400380-8400476:1:exon
so has part: feature:8400559-8401150:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:8399241-8399430:1:exon

position:8399430:1
position: 8399430
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:8399915-8400007:1:exon

position:8399915:1
position: 8399915
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8400007:1
position: 8400007
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:8400380-8400476:1:exon

position:8400380:1
position: 8400380
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8400476:1
position: 8400476
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:8400559-8401150:1:exon

position:8400559:1
position: 8400559
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC119422232
type: Gene
subclass of: SO_0000704
RO_0002162: 451745
gene: LOC119422232
note: Derived by automated computational analysis using gene prediction method: cmsearch.
pseudo: true
so part of: sequence
location: complement(8421113..8421231)
location: region:8421113-8421231:-1
so has part: feature:8421113-8421231:-1:exon

119422232
type: Gene
SIO_000068: ncbigene

position:8421113:-1
position: 8421113
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8421231:-1
position: 8421231
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8421113-8421231:-1:exon

LOC119422232
type: Exon
subclass of: SO_0000147
RO_0002162: 451745
gene: LOC119422232
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00001
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
pseudo: true
SIO_010081: LOC119422232
subclass of: SO_0000673
so part of: LOC119422232
location: complement(8421113..8421231)
location: region:8421113-8421231:-1
so has part: feature:8421113-8421231:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:8421113-8421231:-1:exon

cbx1a
type: Gene
subclass of: SO_0000704
RO_0002162: 451745
gene: cbx1a
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 8607806..8746308
location: region:8607806-8746308:1
so has part: feature:8607806-8746308:1:exon
subclass of: SO_0000010

119421950
type: Gene
SIO_000068: ncbigene

position:8607806:1
position: 8607806
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8746308:1
position: 8746308
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8607806-8746308:1:exon

cbx1a
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 451745
gene: cbx1a
product: chromobox homolog 1a (HP1 beta homolog Drosophila)
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 35 Proteins, and 86% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_037689309.1
SIO_010081: cbx1a
subclass of: SO_0000673
so part of: cbx1a
location: join(8607806..8607967,8668354..8668498,8727070..8727322,8740898..8741069,8741168..8741262,8745800..8746308)
location: region:8607806-8746308:1
so has part: feature:8607806-8607967:1:exon
so has part: feature:8668354-8668498:1:exon
so has part: feature:8727070-8727322:1:exon
so has part: feature:8740898-8741069:1:exon
so has part: feature:8741168-8741262:1:exon
so has part: feature:8745800-8746308:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:8607806-8607967:1:exon

position:8607967:1
position: 8607967
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:8668354-8668498:1:exon

position:8668354:1
position: 8668354
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8668498:1
position: 8668498
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:8727070-8727322:1:exon

position:8727070:1
position: 8727070
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8727322:1
position: 8727322
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:8740898-8741069:1:exon

position:8740898:1
position: 8740898
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8741069:1
position: 8741069
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:8741168-8741262:1:exon

position:8741168:1
position: 8741168
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8741262:1
position: 8741262
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:8745800-8746308:1:exon

position:8745800:1
position: 8745800
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

cbx1a
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 451745
gene: cbx1a
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: chromobox protein homolog 1a
translation: MHQQRINNVNLRNQFYKELDKYMPKFITLFRDKATKTGKIAEELTKLMRIYDLQLQSSLPLRHFVCGSVGSFTLSRRVNHSAFIWACLLHILKCPGQRFLCQGISASVKLATVAVKKGKKVEEEEPQQPAPPAADAAAIAPPAASTPAAAGAAEEEEEEEYVVEKVLDRRVVKGKVEFLLKWKGFSDEDNTWEPEENLDCPDLIAAYMQKHKEKEEKKKESKRKSTSEASGESEERAGKKRKEEGEKTRGFGRGLQPERIIGATDSSGELMFLMKWKNSDEADLVPAKEANVKCPQVVISFYEERLTWHSYPTEEEEKKEEDKKD
SIO_010081: cbx1a
subclass of: SO_0000673
so part of: cbx1a
location: join(8607806..8607967,8668354..8668498,8727070..8727322,8740898..8741069,8741168..8741262,8745800..8745950)
location: region:8607806-8745950:1
so has part: feature:8607806-8607967:1:exon
so has part: feature:8668354-8668498:1:exon
so has part: feature:8727070-8727322:1:exon
so has part: feature:8740898-8741069:1:exon
so has part: feature:8741168-8741262:1:exon
so has part: feature:8745800-8745950:1:exon

XP_037545237.1
type: Protein
SIO_000068: ncbiprotein

position:8745950:1
position: 8745950
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8607806-8607967:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:8668354-8668498:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:8727070-8727322:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:8740898-8741069:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:8741168-8741262:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:8745800-8745950:1:exon

LOC119421951
type: Gene
subclass of: SO_0000704
RO_0002162: 451745
gene: LOC119421951
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(8848472..8850816)
location: region:8848472-8850816:-1
so has part: feature:8848472-8850816:-1:exon
subclass of: SO_0000010

119421951
type: Gene
SIO_000068: ncbigene

position:8848472:-1
position: 8848472
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8850816:-1
position: 8850816
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8848472-8850816:-1:exon

LOC119421951
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 451745
gene: LOC119421951
product: uncharacterized LOC119421951
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 95% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_037689310.1
SIO_010081: LOC119421951
subclass of: SO_0000673
so part of: LOC119421951
location: complement(join(8848472..8848561,8848655..8849065,8849762..8849889,8850783..8850816))
location: region:8848472-8850816:-1
so has part: feature:8850783-8850816:-1:exon
so has part: feature:8849762-8849889:-1:exon
so has part: feature:8848655-8849065:-1:exon
so has part: feature:8848472-8848561:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:8850783-8850816:-1:exon

position:8850783:-1
position: 8850783
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:8849762-8849889:-1:exon

position:8849762:-1
position: 8849762
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8849889:-1
position: 8849889
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:8848655-8849065:-1:exon

position:8848655:-1
position: 8848655
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8849065:-1
position: 8849065
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:8848472-8848561:-1:exon

position:8848561:-1
position: 8848561
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC119421951
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 451745
gene: LOC119421951
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC119421951
translation: MMGNLSREDLRDLFPGPENFLRRKAIWIACHGASEEDSGKEDSTLVSCSSNNGSPMQQTSTPMKSSLPKFETPEKVVKLTFPEYVLHTDTELEHVRQQYFELSKKGEERNCEMSKELRCRLIRNTMTSMIAILRAKGDAESHRYPSKPEITAVAKRIVLYYPMLQDQGLKNSWVTVFAQLNKRLQNVRSPLKKSQSGKQSKR
SIO_010081: LOC119421951
subclass of: SO_0000673
so part of: LOC119421951
location: complement(join(8848472..8848561,8848655..8849065,8849762..8849869))
location: region:8848472-8849869:-1
so has part: feature:8849762-8849869:-1:exon
so has part: feature:8848655-8849065:-1:exon
so has part: feature:8848472-8848561:-1:exon

XP_037545238.1
type: Protein
SIO_000068: ncbiprotein

position:8849869:-1
position: 8849869
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8849762-8849869:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:8848655-8849065:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:8848472-8848561:-1:exon

LOC119421952
type: Gene
subclass of: SO_0000704
RO_0002162: 451745
gene: LOC119421952
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 8851042..8857286
location: region:8851042-8857286:1
so has part: feature:8851042-8857286:1:exon
subclass of: SO_0000010

119421952
type: Gene
SIO_000068: ncbigene

position:8851042:1
position: 8851042
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8857286:1
position: 8857286
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8851042-8857286:1:exon

LOC119421952
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 451745
gene: LOC119421952
product: uncharacterized LOC119421952
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 97% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_037689311.1
SIO_010081: LOC119421952
subclass of: SO_0000673
so part of: LOC119421952
location: join(8851042..8851450,8852233..8852334,8852766..8853392,8857275..8857286)
location: region:8851042-8857286:1
so has part: feature:8851042-8851450:1:exon
so has part: feature:8852233-8852334:1:exon
so has part: feature:8852766-8853392:1:exon
so has part: feature:8857275-8857286:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:8851042-8851450:1:exon

position:8851450:1
position: 8851450
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:8852233-8852334:1:exon

position:8852233:1
position: 8852233
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8852334:1
position: 8852334
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:8852766-8853392:1:exon

position:8852766:1
position: 8852766
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8853392:1
position: 8853392
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:8857275-8857286:1:exon

position:8857275:1
position: 8857275
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC119421952
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 451745
gene: LOC119421952
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC119421952
translation: MIWRCFICYVFVALSLRQLLSHINVMHSRSPDFRVVCGIDGCPSEYRVYNSFYYHVKRTHTHHLLNIEADEDESTFDGVNERTAKNEQTSTTLPGAAAHSAVTSANNGSSIVIGTSKFQEGGEGHTNLDLSKHATAFLLQARETQRLTQRAVNHMVSGVQQYQAVLLEHLKQQMCSLIEGHSGDLDELRSGALGIFDKFVDPFSQISSTHLQNKTIKELLQPVEPEIVVAKQTVCYVKHGDSRVLSTKDHCFHYVPLVKSLEQLLSHPRVLAMIDEGQQQCNDGFFQDFVDGDIFKSHPLFLKVPKALQLIFYTDEIELCNPLGSRSNKNKLLMIYYTLGNISPKYRSRLAAIRLLVMNNM
SIO_010081: LOC119421952
subclass of: SO_0000673
so part of: LOC119421952
location: join(8851106..8851450,8852233..8852334,8852766..8853392,8857275..8857286)
location: region:8851106-8857286:1
so has part: feature:8851106-8851450:1:exon
so has part: feature:8852233-8852334:1:exon
so has part: feature:8852766-8853392:1:exon
so has part: feature:8857275-8857286:1:exon

XP_037545239.1
type: Protein
SIO_000068: ncbiprotein

position:8851106:1
position: 8851106
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8851106-8851450:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:8852233-8852334:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:8852766-8853392:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:8857275-8857286:1:exon

LOC119421953
type: Gene
subclass of: SO_0000704
RO_0002162: 451745
gene: LOC119421953
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(8858514..8880110)
location: region:8858514-8880110:-1
so has part: feature:8858514-8880110:-1:exon
subclass of: SO_0000010

119421953
type: Gene
SIO_000068: ncbigene

position:8858514:-1
position: 8858514
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8880110:-1
position: 8880110
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8858514-8880110:-1:exon

LOC119421953
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 451745
gene: LOC119421953
product: endoplasmic reticulum membrane sensor NFE2L1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 89% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_037689312.1
SIO_010081: LOC119421953
subclass of: SO_0000673
so part of: LOC119421953
location: complement(join(8858514..8859780,8863375..8863959,8866358..8866517,8866646..8866783,8879982..8880110))
location: region:8858514-8880110:-1
so has part: feature:8879982-8880110:-1:exon
so has part: feature:8866646-8866783:-1:exon
so has part: feature:8866358-8866517:-1:exon
so has part: feature:8863375-8863959:-1:exon
so has part: feature:8858514-8859780:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:8879982-8880110:-1:exon

position:8879982:-1
position: 8879982
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:8866646-8866783:-1:exon

position:8866646:-1
position: 8866646
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8866783:-1
position: 8866783
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:8866358-8866517:-1:exon

position:8866358:-1
position: 8866358
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8866517:-1
position: 8866517
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:8863375-8863959:-1:exon

position:8863375:-1
position: 8863375
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8863959:-1
position: 8863959
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:8858514-8859780:-1:exon

position:8859780:-1
position: 8859780
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC119421953
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 451745
gene: LOC119421953
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: endoplasmic reticulum membrane sensor NFE2L1
translation: MYGPFCWWWSQWKANPCKSFRLSLIELDGIEAQSPGTCLAPCRLRDVDGRSGVVACHTLDIELLQPPITPENSCNDLDLQDLLDILQPENTQVEMMTVFHNTMDLEASRTCQNVESDALPQLQKCLSCVVPQAHQPVPLLQYGLLHTPNPSELQPDLLPLVPSTELDDHSPTPTTRVTLGNSDPYSSNTPTNYTDLLTDDLEESVKGVNNLTHFSMNLLTQEDRLESENFSGFGIHFLSCDLPAPNIPLRNSLTQDLMVSPSSAFLQPEEDEKGLPRPVTDLLEDPNILEGIQLLDIALEEGFISEMADRLEEIVYNDGEIFQQETGSDQRPSSQKEDGEDAMDSDSGLSVDFIHSSGSSYISEGSTHYSSIFTPSTLSPSLVSTVENIFSEDEDRWDENDVIGTDLELQVTVKQEMLEEEIGAVGDAKQLFPDNYVNHKLLHGFNWLEYIGHDHTYNQTLSSPSRCKAPQQVKSALRHHKAKPYHKITETKNWNRDKRQAQALEIPFSNELIVHLPVEDFSDLLSSYQLTDEQLALARDIRRRGKNKIAAQNCRKRKLDVLLCLESEVSDLRHHFSHLLREKREALRHTQEMKHRLKALLKEIFSQLRDEEGRPLNATEHVLHFRPNDVTVASVTVNKNNKDK
SIO_010081: LOC119421953
subclass of: SO_0000673
so part of: LOC119421953
location: complement(join(8858858..8859780,8863375..8863959,8866358..8866517,8866646..8866783,8879982..8880110))
location: region:8858858-8880110:-1
so has part: feature:8879982-8880110:-1:exon
so has part: feature:8866646-8866783:-1:exon
so has part: feature:8866358-8866517:-1:exon
so has part: feature:8863375-8863959:-1:exon
so has part: feature:8858858-8859780:-1:exon

XP_037545240.1
type: Protein
SIO_000068: ncbiprotein

position:8858858:-1
position: 8858858
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8879982-8880110:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:8866646-8866783:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:8866358-8866517:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:8863375-8863959:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:8858858-8859780:-1:exon

copz2
type: Gene
subclass of: SO_0000704
RO_0002162: 451745
gene: copz2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 8968512..9035364
location: region:8968512-9035364:1
so has part: feature:8968512-9035364:1:exon
subclass of: SO_0000010

119422029
type: Gene
SIO_000068: ncbigene

position:8968512:1
position: 8968512
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9035364:1
position: 9035364
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8968512-9035364:1:exon

copz2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 451745
gene: copz2
product: COPI coat complex subunit zeta 2, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 33 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_037689369.1
SIO_010081: copz2
subclass of: SO_0000673
so part of: copz2
location: join(8968512..8968539,8976816..8976884,8982005..8982089,8982691..8982782,8997277..8997332,9008271..9008348,9014186..9014237,9020304..9020342,9021277..9021309,9035283..9035364)
location: region:8968512-9035364:1
so has part: feature:8968512-8968539:1:exon
so has part: feature:8976816-8976884:1:exon
so has part: feature:8982005-8982089:1:exon
so has part: feature:8982691-8982782:1:exon
so has part: feature:8997277-8997332:1:exon
so has part: feature:9008271-9008348:1:exon
so has part: feature:9014186-9014237:1:exon
so has part: feature:9020304-9020342:1:exon
so has part: feature:9021277-9021309:1:exon
so has part: feature:9035283-9035364:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:8968512-8968539:1:exon

position:8968539:1
position: 8968539
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:8976816-8976884:1:exon

position:8976816:1
position: 8976816
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8976884:1
position: 8976884
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:8982005-8982089:1:exon

position:8982005:1
position: 8982005
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8982089:1
position: 8982089
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:8982691-8982782:1:exon

position:8982691:1
position: 8982691
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8982782:1
position: 8982782
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:8997277-8997332:1:exon

position:8997277:1
position: 8997277
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8997332:1
position: 8997332
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:9008271-9008348:1:exon

position:9008271:1
position: 9008271
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9008348:1
position: 9008348
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:9014186-9014237:1:exon

position:9014186:1
position: 9014186
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9014237:1
position: 9014237
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:9020304-9020342:1:exon

position:9020304:1
position: 9020304
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9020342:1
position: 9020342
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:9021277-9021309:1:exon

position:9021277:1
position: 9021277
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9021309:1
position: 9021309
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:9035283-9035364:1:exon

position:9035283:1
position: 9035283
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

copz2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 451745
gene: copz2
product: COPI coat complex subunit zeta 2, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 33 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_037689370.1
SIO_010081: copz2
subclass of: SO_0000673
so part of: copz2
location: join(8968512..8968539,8976816..8976884,8982005..8982089,8982691..8982782,8997277..8997332,9008271..9008348,9014186..9014237,9020304..9020342,9035283..9035364)
location: region:8968512-9035364:1
so has part: feature:8968512-8968539:1:exon
so has part: feature:8976816-8976884:1:exon
so has part: feature:8982005-8982089:1:exon
so has part: feature:8982691-8982782:1:exon
so has part: feature:8997277-8997332:1:exon
so has part: feature:9008271-9008348:1:exon
so has part: feature:9014186-9014237:1:exon
so has part: feature:9020304-9020342:1:exon
so has part: feature:9035283-9035364:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:8968512-8968539:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:8976816-8976884:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:8982005-8982089:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:8982691-8982782:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:8997277-8997332:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:9008271-9008348:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:9014186-9014237:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:9020304-9020342:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:9035283-9035364:1:exon

copz2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 451745
gene: copz2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: coatomer subunit zeta-2 isoform X1
translation: MDSTNLEPSLYTVKAVFILDNDGNRLLSKYYDPELYPSMKEQKNFESNVFSKTHKADNEIAFLEGMTIVYKSSIDLFFYVVGSAQENELMLMSVLNCLFDSLSHILRKNVERRCLLDNMEGVFLVVDEIIDGGVILESDPQQVLQKVNYRADENPLTEQSVAQHLTEKLALTTNVLQSAKEQIKWSILK
SIO_010081: copz2
subclass of: SO_0000673
so part of: copz2
location: join(8968522..8968539,8976816..8976884,8982005..8982089,8982691..8982782,8997277..8997332,9008271..9008348,9014186..9014237,9020304..9020342,9021277..9021309,9035283..9035330)
location: region:8968522-9035330:1
so has part: feature:8968522-8968539:1:exon
so has part: feature:8976816-8976884:1:exon
so has part: feature:8982005-8982089:1:exon
so has part: feature:8982691-8982782:1:exon
so has part: feature:8997277-8997332:1:exon
so has part: feature:9008271-9008348:1:exon
so has part: feature:9014186-9014237:1:exon
so has part: feature:9020304-9020342:1:exon
so has part: feature:9021277-9021309:1:exon
so has part: feature:9035283-9035330:1:exon

XP_037545297.1
type: Protein
SIO_000068: ncbiprotein

position:8968522:1
position: 8968522
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9035330:1
position: 9035330
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8968522-8968539:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:8976816-8976884:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:8982005-8982089:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:8982691-8982782:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:8997277-8997332:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:9008271-9008348:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:9014186-9014237:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:9020304-9020342:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:9021277-9021309:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:9035283-9035330:1:exon

copz2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 451745
gene: copz2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: coatomer subunit zeta-2 isoform X2
translation: MDSTNLEPSLYTVKAVFILDNDGNRLLSKYYDPELYPSMKEQKNFESNVFSKTHKADNEIAFLEGMTIVYKSSIDLFFYVVGSAQENELMLMSVLNCLFDSLSHILRKNVERRCLLDNMEGVFLVVDEIIDGGVILESDPQQVLQKVNYRADENPLTEQSVAQVLQSAKEQIKWSILK
SIO_010081: copz2
subclass of: SO_0000673
so part of: copz2
location: join(8968522..8968539,8976816..8976884,8982005..8982089,8982691..8982782,8997277..8997332,9008271..9008348,9014186..9014237,9020304..9020342,9035283..9035330)
location: region:8968522-9035330:1
so has part: feature:8968522-8968539:1:exon
so has part: feature:8976816-8976884:1:exon
so has part: feature:8982005-8982089:1:exon
so has part: feature:8982691-8982782:1:exon
so has part: feature:8997277-8997332:1:exon
so has part: feature:9008271-9008348:1:exon
so has part: feature:9014186-9014237:1:exon
so has part: feature:9020304-9020342:1:exon
so has part: feature:9035283-9035330:1:exon

XP_037545298.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:8968522-8968539:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:8976816-8976884:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:8982005-8982089:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:8982691-8982782:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:8997277-8997332:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:9008271-9008348:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:9014186-9014237:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:9020304-9020342:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:9035283-9035330:1:exon

hoxb13a
type: Gene
subclass of: SO_0000704
RO_0002162: 451745
gene: hoxb13a
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(9169523..9171296)
location: region:9169523-9171296:-1
so has part: feature:9169523-9171296:-1:exon
subclass of: SO_0000010

119421954
type: Gene
SIO_000068: ncbigene

position:9169523:-1
position: 9169523
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9171296:-1
position: 9171296
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9169523-9171296:-1:exon

hoxb13a
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 451745
gene: hoxb13a
product: homeobox B13a
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 49 Proteins, and 36% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_037689313.1
SIO_010081: hoxb13a
subclass of: SO_0000673
so part of: hoxb13a
location: complement(join(9169523..9169770,9170567..9171296))
location: region:9169523-9171296:-1
so has part: feature:9170567-9171296:-1:exon
so has part: feature:9169523-9169770:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:9170567-9171296:-1:exon

position:9170567:-1
position: 9170567
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:9169523-9169770:-1:exon

position:9169770:-1
position: 9169770
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

hoxb13a
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 451745
gene: hoxb13a
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: homeobox protein Hox-B13a
translation: MTSCLVLDPRWAAEPVMFVYDSNLEDLNRNMEGLMGSGNFVAAASQCRNIMAHPAAAAAFGGHPSSLVHSSAPGCTSIDVSSSSGSNETTASSGKQCAAAGPCPGAAVPHQTSSGSAALPYSYFGNGYYPCRMARGSLKSGSQAAGAALSSQYMDTTMSPDEHPNHRAKEFAFYHGYAGPYQSVASYLDVSVVQTLGAGEPRHDSLLPMDSYQPWALTSGWGGQMYCPKDPAQAGHLWKSALADVVAQQHDGSSFCRGRKKRIPYTKVQLKELEKEYAANKFITKDKRRKISALTGLSERQITIWFQNRRVKEKKFVAKVKSSAA
SIO_010081: hoxb13a
subclass of: SO_0000673
so part of: hoxb13a
location: complement(join(9169523..9169770,9170567..9171296))
location: region:9169523-9171296:-1
so has part: feature:9170567-9171296:-1:exon
so has part: feature:9169523-9169770:-1:exon

XP_037545241.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:9170567-9171296:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:9169523-9169770:-1:exon

LOC119422248
type: Gene
subclass of: SO_0000704
RO_0002162: 451745
gene: LOC119422248
note: Derived by automated computational analysis using gene prediction method: cmsearch.
pseudo: true
so part of: sequence
location: 9475051..9475165
location: region:9475051-9475165:1
so has part: feature:9475051-9475165:1:exon

119422248
type: Gene
SIO_000068: ncbigene

position:9475051:1
position: 9475051
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9475165:1
position: 9475165
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9475051-9475165:1:exon

LOC119422248
type: Exon
subclass of: SO_0000147
RO_0002162: 451745
gene: LOC119422248
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00001
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
pseudo: true
SIO_010081: LOC119422248
subclass of: SO_0000673
so part of: LOC119422248
location: 9475051..9475165
location: region:9475051-9475165:1
so has part: feature:9475051-9475165:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:9475051-9475165:1:exon

ap2a1
type: Gene
subclass of: SO_0000704
RO_0002162: 451745
gene: ap2a1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 9711621..9827086
location: region:9711621-9827086:1
so has part: feature:9711621-9827086:1:exon
subclass of: SO_0000010

119421443
type: Gene
SIO_000068: ncbigene

position:9711621:1
position: 9711621
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9827086:1
position: 9827086
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9711621-9827086:1:exon

ap2a1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 451745
gene: ap2a1
product: adaptor related protein complex 2 subunit alpha 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_037688797.1
SIO_010081: ap2a1
subclass of: SO_0000673
so part of: ap2a1
location: join(9711621..9712349,9742685..9742896,9751609..9751802,9751891..9752020,9752123..9752224,9755402..9755661,9757446..9757614,9757743..9757880,9779734..9779916,9780034..9780131,9780210..9780441,9780605..9780793,9780874..9781028,9791905..9791967,9797818..9797880,9799245..9799327,9800248..9800337,9801117..9801240,9803159..9803275,9803636..9803705,9804493..9804627,9826412..9827086)
location: region:9711621-9827086:1
so has part: feature:9711621-9712349:1:exon
so has part: feature:9742685-9742896:1:exon
so has part: feature:9751609-9751802:1:exon
so has part: feature:9751891-9752020:1:exon
so has part: feature:9752123-9752224:1:exon
so has part: feature:9755402-9755661:1:exon
so has part: feature:9757446-9757614:1:exon
so has part: feature:9757743-9757880:1:exon
so has part: feature:9779734-9779916:1:exon
so has part: feature:9780034-9780131:1:exon
so has part: feature:9780210-9780441:1:exon
so has part: feature:9780605-9780793:1:exon
so has part: feature:9780874-9781028:1:exon
so has part: feature:9791905-9791967:1:exon
so has part: feature:9797818-9797880:1:exon
so has part: feature:9799245-9799327:1:exon
so has part: feature:9800248-9800337:1:exon
so has part: feature:9801117-9801240:1:exon
so has part: feature:9803159-9803275:1:exon
so has part: feature:9803636-9803705:1:exon
so has part: feature:9804493-9804627:1:exon
so has part: feature:9826412-9827086:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:9711621-9712349:1:exon

position:9712349:1
position: 9712349
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:9742685-9742896:1:exon

position:9742685:1
position: 9742685
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9742896:1
position: 9742896
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:9751609-9751802:1:exon

position:9751609:1
position: 9751609
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9751802:1
position: 9751802
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:9751891-9752020:1:exon

position:9751891:1
position: 9751891
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9752020:1
position: 9752020
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:9752123-9752224:1:exon

position:9752123:1
position: 9752123
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9752224:1
position: 9752224
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:9755402-9755661:1:exon

position:9755402:1
position: 9755402
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9755661:1
position: 9755661
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:9757446-9757614:1:exon

position:9757446:1
position: 9757446
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9757614:1
position: 9757614
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:9757743-9757880:1:exon

position:9757743:1
position: 9757743
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9757880:1
position: 9757880
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:9779734-9779916:1:exon

position:9779734:1
position: 9779734
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9779916:1
position: 9779916
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:9780034-9780131:1:exon

position:9780034:1
position: 9780034
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9780131:1
position: 9780131
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:9780210-9780441:1:exon

position:9780210:1
position: 9780210
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9780441:1
position: 9780441
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:9780605-9780793:1:exon

position:9780605:1
position: 9780605
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9780793:1
position: 9780793
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:9780874-9781028:1:exon

position:9780874:1
position: 9780874
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9781028:1
position: 9781028
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:9791905-9791967:1:exon

position:9791905:1
position: 9791905
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9791967:1
position: 9791967
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:9797818-9797880:1:exon

position:9797818:1
position: 9797818
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9797880:1
position: 9797880
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:9799245-9799327:1:exon

position:9799245:1
position: 9799245
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9799327:1
position: 9799327
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:9800248-9800337:1:exon

position:9800248:1
position: 9800248
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9800337:1
position: 9800337
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:9801117-9801240:1:exon

position:9801117:1
position: 9801117
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9801240:1
position: 9801240
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:9803159-9803275:1:exon

position:9803159:1
position: 9803159
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9803275:1
position: 9803275
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:9803636-9803705:1:exon

position:9803636:1
position: 9803636
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9803705:1
position: 9803705
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:9804493-9804627:1:exon

position:9804493:1
position: 9804493
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9804627:1
position: 9804627
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:9826412-9827086:1:exon

position:9826412:1
position: 9826412
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

ap2a1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 451745
gene: ap2a1
product: adaptor related protein complex 2 subunit alpha 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_037688796.1
SIO_010081: ap2a1
subclass of: SO_0000673
so part of: ap2a1
location: join(9711621..9712349,9742685..9742896,9751609..9751802,9751891..9752020,9752123..9752224,9755402..9755661,9757446..9757614,9757743..9757880,9779734..9779916,9780034..9780131,9780210..9780441,9780605..9780793,9780874..9781028,9799245..9799327,9800248..9800337,9801117..9801240,9803159..9803275,9803636..9803705,9804493..9804627,9826412..9827086)
location: region:9711621-9827086:1
so has part: feature:9711621-9712349:1:exon
so has part: feature:9742685-9742896:1:exon
so has part: feature:9751609-9751802:1:exon
so has part: feature:9751891-9752020:1:exon
so has part: feature:9752123-9752224:1:exon
so has part: feature:9755402-9755661:1:exon
so has part: feature:9757446-9757614:1:exon
so has part: feature:9757743-9757880:1:exon
so has part: feature:9779734-9779916:1:exon
so has part: feature:9780034-9780131:1:exon
so has part: feature:9780210-9780441:1:exon
so has part: feature:9780605-9780793:1:exon
so has part: feature:9780874-9781028:1:exon
so has part: feature:9799245-9799327:1:exon
so has part: feature:9800248-9800337:1:exon
so has part: feature:9801117-9801240:1:exon
so has part: feature:9803159-9803275:1:exon
so has part: feature:9803636-9803705:1:exon
so has part: feature:9804493-9804627:1:exon
so has part: feature:9826412-9827086:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:9711621-9712349:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:9742685-9742896:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:9751609-9751802:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:9751891-9752020:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:9752123-9752224:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:9755402-9755661:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:9757446-9757614:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:9757743-9757880:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:9779734-9779916:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:9780034-9780131:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:9780210-9780441:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:9780605-9780793:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:9780874-9781028:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:9799245-9799327:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:9800248-9800337:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:9801117-9801240:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:9803159-9803275:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:9803636-9803705:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:9804493-9804627:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:9826412-9827086:1:exon

ap2a1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 451745
gene: ap2a1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: AP-2 complex subunit alpha-2 isoform X2
translation: MPAVSKGDGMRGLAVFISDIRNCKSKEAEIKRINKELANIRSKFKGDKALDGYSKKKYVCKLLFIFLLGHDIDFGHMEAVNLLSSNKYTEKQIGYLFISVLVNSNSELIRLINNAIKNDLSSRNPTFMCLALHCIANVGSREMAEAFASEIPRILVAGDTMDSVKQSAALCLLRLYKTSPDLVLMGEWTSRVVHLLNDQHMGVVTAAISLITCLSQKNPDEFKTCVSLAVSRLSRIVSSASTDLQDYTYYFVPAPWLSCKLLRLLQCYPPPEDGAVKGRLVECLETILNKAQEPPKSKKVQHSNAKNAILFEAISLIIHYDSEPNLLVRACNQLGQFLQHRETNLRYLALESMCTLASSEFSHEAVKTHIETVINALKTERDVSVRQRAADLLYAMCDRSNAKQIVAEMLSYLETADYSIREEMVLKVAILAEKYAVDYSWYVDTILNLIRIAGDYVSEEVWYRVIQIVINRDDVQGYAAKTVFEALQAPACHENMVKVGGYILGEFGNLIAGDPRSSPLVQFNLLHSKFHLCSVPTRALLLSAYIKFINLFPETKATIQEVLRCDSQIRNSDVELQQRAVEYLKLSSIASTDVLATVLEEMPPFPERESSILAKLKKKKGPGAVSVTELEDGKREGGELNGGGERGPDAAVMAASNASTPSPSADLLGIRSSAPVNTAPTSTGSLLVDVFSEAGPAASSAAVNDDGFLRDLEQPTETSDPLLVEGSGDSDSAPPSEDPAPPLSEADELLDKFVCKNNGVLFENQLLQIGIKSEYRQNLGRMYLFYGNKTSVQFASFSTTVSCPGELQSQLNVQSKPVEPLVEGGAQIQQVLNIECLTDFCDAPLLNIKFRYGGALQNLTLKLPVTINKFFQPTEMSSQDFFQRWKQLSQPQQEAQKIFKANHGMDTEVIKAKLLGLGMALLDNVDPNPENYVCAGVIQTKGQQVGCLLRLEPNAQAQMYRLTLRCSKDSVSRRLCELLAQQF
SIO_010081: ap2a1
subclass of: SO_0000673
so part of: ap2a1
location: join(9712283..9712349,9742685..9742896,9751609..9751802,9751891..9752020,9752123..9752224,9755402..9755661,9757446..9757614,9757743..9757880,9779734..9779916,9780034..9780131,9780210..9780441,9780605..9780793,9780874..9781028,9791905..9791967,9797818..9797880,9799245..9799327,9800248..9800337,9801117..9801240,9803159..9803275,9803636..9803705,9804493..9804627,9826412..9826489)
location: region:9712283-9826489:1
so has part: feature:9712283-9712349:1:exon
so has part: feature:9742685-9742896:1:exon
so has part: feature:9751609-9751802:1:exon
so has part: feature:9751891-9752020:1:exon
so has part: feature:9752123-9752224:1:exon
so has part: feature:9755402-9755661:1:exon
so has part: feature:9757446-9757614:1:exon
so has part: feature:9757743-9757880:1:exon
so has part: feature:9779734-9779916:1:exon
so has part: feature:9780034-9780131:1:exon
so has part: feature:9780210-9780441:1:exon
so has part: feature:9780605-9780793:1:exon
so has part: feature:9780874-9781028:1:exon
so has part: feature:9791905-9791967:1:exon
so has part: feature:9797818-9797880:1:exon
so has part: feature:9799245-9799327:1:exon
so has part: feature:9800248-9800337:1:exon
so has part: feature:9801117-9801240:1:exon
so has part: feature:9803159-9803275:1:exon
so has part: feature:9803636-9803705:1:exon
so has part: feature:9804493-9804627:1:exon
so has part: feature:9826412-9826489:1:exon

XP_037544725.1
type: Protein
SIO_000068: ncbiprotein

position:9712283:1
position: 9712283
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9826489:1
position: 9826489
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9712283-9712349:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:9742685-9742896:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:9751609-9751802:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:9751891-9752020:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:9752123-9752224:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:9755402-9755661:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:9757446-9757614:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:9757743-9757880:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:9779734-9779916:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:9780034-9780131:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:9780210-9780441:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:9780605-9780793:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:9780874-9781028:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:9791905-9791967:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:9797818-9797880:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:9799245-9799327:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:9800248-9800337:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:9801117-9801240:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:9803159-9803275:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:9803636-9803705:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:9804493-9804627:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:9826412-9826489:1:exon

ap2a1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 451745
gene: ap2a1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: AP-2 complex subunit alpha-2 isoform X1
translation: MPAVSKGDGMRGLAVFISDIRNCKSKEAEIKRINKELANIRSKFKGDKALDGYSKKKYVCKLLFIFLLGHDIDFGHMEAVNLLSSNKYTEKQIGYLFISVLVNSNSELIRLINNAIKNDLSSRNPTFMCLALHCIANVGSREMAEAFASEIPRILVAGDTMDSVKQSAALCLLRLYKTSPDLVLMGEWTSRVVHLLNDQHMGVVTAAISLITCLSQKNPDEFKTCVSLAVSRLSRIVSSASTDLQDYTYYFVPAPWLSCKLLRLLQCYPPPEDGAVKGRLVECLETILNKAQEPPKSKKVQHSNAKNAILFEAISLIIHYDSEPNLLVRACNQLGQFLQHRETNLRYLALESMCTLASSEFSHEAVKTHIETVINALKTERDVSVRQRAADLLYAMCDRSNAKQIVAEMLSYLETADYSIREEMVLKVAILAEKYAVDYSWYVDTILNLIRIAGDYVSEEVWYRVIQIVINRDDVQGYAAKTVFEALQAPACHENMVKVGGYILGEFGNLIAGDPRSSPLVQFNLLHSKFHLCSVPTRALLLSAYIKFINLFPETKATIQEVLRCDSQIRNSDVELQQRAVEYLKLSSIASTDVLATVLEEMPPFPERESSILAKLKKKKGPGAVSVTELEDGKREGGELNGGGERGPDAAVMAASNASTPSPSADLLGIRSSAPVNTAPTSTGSLLVDVFSEAGPAASSAAVNDDGFLRFVCKNNGVLFENQLLQIGIKSEYRQNLGRMYLFYGNKTSVQFASFSTTVSCPGELQSQLNVQSKPVEPLVEGGAQIQQVLNIECLTDFCDAPLLNIKFRYGGALQNLTLKLPVTINKFFQPTEMSSQDFFQRWKQLSQPQQEAQKIFKANHGMDTEVIKAKLLGLGMALLDNVDPNPENYVCAGVIQTKGQQVGCLLRLEPNAQAQMYRLTLRCSKDSVSRRLCELLAQQF
SIO_010081: ap2a1
subclass of: SO_0000673
so part of: ap2a1
location: join(9712283..9712349,9742685..9742896,9751609..9751802,9751891..9752020,9752123..9752224,9755402..9755661,9757446..9757614,9757743..9757880,9779734..9779916,9780034..9780131,9780210..9780441,9780605..9780793,9780874..9781028,9799245..9799327,9800248..9800337,9801117..9801240,9803159..9803275,9803636..9803705,9804493..9804627,9826412..9826489)
location: region:9712283-9826489:1
so has part: feature:9712283-9712349:1:exon
so has part: feature:9742685-9742896:1:exon
so has part: feature:9751609-9751802:1:exon
so has part: feature:9751891-9752020:1:exon
so has part: feature:9752123-9752224:1:exon
so has part: feature:9755402-9755661:1:exon
so has part: feature:9757446-9757614:1:exon
so has part: feature:9757743-9757880:1:exon
so has part: feature:9779734-9779916:1:exon
so has part: feature:9780034-9780131:1:exon
so has part: feature:9780210-9780441:1:exon
so has part: feature:9780605-9780793:1:exon
so has part: feature:9780874-9781028:1:exon
so has part: feature:9799245-9799327:1:exon
so has part: feature:9800248-9800337:1:exon
so has part: feature:9801117-9801240:1:exon
so has part: feature:9803159-9803275:1:exon
so has part: feature:9803636-9803705:1:exon
so has part: feature:9804493-9804627:1:exon
so has part: feature:9826412-9826489:1:exon

XP_037544724.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:9712283-9712349:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:9742685-9742896:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:9751609-9751802:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:9751891-9752020:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:9752123-9752224:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:9755402-9755661:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:9757446-9757614:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:9757743-9757880:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:9779734-9779916:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:9780034-9780131:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:9780210-9780441:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:9780605-9780793:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:9780874-9781028:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:9799245-9799327:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:9800248-9800337:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:9801117-9801240:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:9803159-9803275:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:9803636-9803705:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:9804493-9804627:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:9826412-9826489:1:exon

si:ch211-195b15.8
type: Gene
subclass of: SO_0000704
RO_0002162: 451745
gene: si:ch211-195b15.8
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 9926539..9946144
location: region:9926539-9946144:1
so has part: feature:9926539-9946144:1:exon
subclass of: SO_0000010

119422030
type: Gene
SIO_000068: ncbigene

position:9926539:1
position: 9926539
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9946144:1
position: 9946144
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9926539-9946144:1:exon

si:ch211-195b15.8
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 451745
gene: si:ch211-195b15.8
product: dual specificity protein phosphatase 16
inference: similar to RNA sequence (same species):INSD:GELZ01027110.1
exception: annotated by transcript or proteomic data
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: added 124 bases not found in genome assembly; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 97% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_037689371.1
SIO_010081: si:ch211-195b15.8
subclass of: SO_0000673
so part of: si:ch211-195b15.8
location: join(9926539..9926666,9926844..9926936,9932092..>9932251,<9945275..9946144)
location: region:9926539-9946144:1
so has part: feature:9926539-9926666:1:exon
so has part: feature:9926844-9926936:1:exon
so has part: feature:9932092-9932251:1:exon
so has part: feature:9945275-9946144:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:9926539-9926666:1:exon

position:9926666:1
position: 9926666
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:9926844-9926936:1:exon

position:9926844:1
position: 9926844
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9926936:1
position: 9926936
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:9932092-9932251:1:exon

position:9932092:1
position: 9932092
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9932251:1
position: 9932251
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 4
SIO_000628: feature:9945275-9946144:1:exon

position:9945275:1
position: 9945275
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

si:ch211-195b15.8
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 451745
gene: si:ch211-195b15.8
inference: similar to RNA sequence (same species):INSD:GELZ01027110.1
exception: annotated by transcript or proteomic data
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: added 124 bases not found in genome assembly; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: dual specificity protein phosphatase 16
translation: MVWSLGGDAERPQLSVILPRLYLGAESDVTQEQLASLGISYVLNVSRCSPQPSFLPRSRYLRIPIDDSLWDNLLPWIPQALHFIDAAMSSGASVLVHCAAGISRSPALAVAYIMYNLEMDMDHAYKFVKERRPSISPNFNFLGQLQHFEGTLSQKAYGGGVFTQQQVDQLPSDTPHHEDTTQQGGSLLHENRNKQQDQWSVCPNQQHIQKPASDSCEPTKPAAKPTQLQLPASSASLLEKRKGLTLSLTPLGTCSPSSKSQQLGDGTVPTAVWETRGQLESKTRSGSVSCRPAEETHKEQGLLSPLSITLNKLLDWGEWVLLGGAFVHPVKVGQPVLPYKY
SIO_010081: si:ch211-195b15.8
subclass of: SO_0000673
so part of: si:ch211-195b15.8
location: join(9926844..9926936,9932092..>9932251,<9945275..9945923)
location: region:9926844-9945923:1
so has part: feature:9926844-9926936:1:exon
so has part: feature:9932092-9932251:1:exon
so has part: feature:9945275-9945923:1:exon

XP_037545299.1
type: Protein
SIO_000068: ncbiprotein

position:9945923:1
position: 9945923
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9926844-9926936:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:9932092-9932251:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:9945275-9945923:1:exon

rras
type: Gene
subclass of: SO_0000704
RO_0002162: 451745
gene: rras
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 9955773..10064604
location: region:9955773-10064604:1
so has part: feature:9955773-10064604:1:exon
subclass of: SO_0000010

119421446
type: Gene
SIO_000068: ncbigene

position:9955773:1
position: 9955773
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:10064604:1
position: 10064604
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9955773-10064604:1:exon

rras
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 451745
gene: rras
product: RAS related
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 22 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_037688799.1
SIO_010081: rras
subclass of: SO_0000673
so part of: rras
location: join(9955773..9956351,9984512..9984599,9988250..9988352,9992788..9992896,10015755..10015873,10063530..10064604)
location: region:9955773-10064604:1
so has part: feature:9955773-9956351:1:exon
so has part: feature:9984512-9984599:1:exon
so has part: feature:9988250-9988352:1:exon
so has part: feature:9992788-9992896:1:exon
so has part: feature:10015755-10015873:1:exon
so has part: feature:10063530-10064604:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:9955773-9956351:1:exon

position:9956351:1
position: 9956351
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:9984512-9984599:1:exon

position:9984512:1
position: 9984512
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9984599:1
position: 9984599
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:9988250-9988352:1:exon

position:9988250:1
position: 9988250
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9988352:1
position: 9988352
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:9992788-9992896:1:exon

position:9992788:1
position: 9992788
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9992896:1
position: 9992896
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:10015755-10015873:1:exon

position:10015755:1
position: 10015755
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:10015873:1
position: 10015873
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:10063530-10064604:1:exon

position:10063530:1
position: 10063530
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

rras
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 451745
gene: rras
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ras-related protein R-Ras
translation: MSGEEERFKLVVVGGGGVGKSALTIQFIQSYFVSDYDPTIEDSYTKICTVDGKETRLDILDTAGQEEFGAMREQYMRSGEGFLLVFALNDRGSYHEVQKFHTQILRVKDRDDFPMVLVGNKADLEQQRVISREDAQAFASDNRIHYMEASAKNRYNVDETFLKLVQIIRRFKEMESPPPPTHQMEKQNRGGCPCVIL
SIO_010081: rras
subclass of: SO_0000673
so part of: rras
location: join(9956265..9956351,9984512..9984599,9988250..9988352,9992788..9992896,10015755..10015873,10063530..10063617)
location: region:9956265-10063617:1
so has part: feature:9956265-9956351:1:exon
so has part: feature:9984512-9984599:1:exon
so has part: feature:9988250-9988352:1:exon
so has part: feature:9992788-9992896:1:exon
so has part: feature:10015755-10015873:1:exon
so has part: feature:10063530-10063617:1:exon

XP_037544727.1
type: Protein
SIO_000068: ncbiprotein

position:9956265:1
position: 9956265
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:10063617:1
position: 10063617
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9956265-9956351:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:9984512-9984599:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:9988250-9988352:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:9992788-9992896:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:10015755-10015873:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:10063530-10063617:1:exon

prrg2
type: Gene
subclass of: SO_0000704
RO_0002162: 451745
gene: prrg2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 10100568..10191151
location: region:10100568-10191151:1
so has part: feature:10100568-10191151:1:exon
subclass of: SO_0000010

119421445
type: Gene
SIO_000068: ncbigene

position:10100568:1
position: 10100568
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:10191151:1
position: 10191151
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:10100568-10191151:1:exon

prrg2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 451745
gene: prrg2
product: proline rich Gla (G-carboxyglutamic acid) 2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 96% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_037688798.1
SIO_010081: prrg2
subclass of: SO_0000673
so part of: prrg2
location: join(10100568..10100686,10100775..10100868,10127994..10128166,10140319..10140352,10149631..10149760,10186793..10186942,10191006..10191151)
location: region:10100568-10191151:1
so has part: feature:10100568-10100686:1:exon
so has part: feature:10100775-10100868:1:exon
so has part: feature:10127994-10128166:1:exon
so has part: feature:10140319-10140352:1:exon
so has part: feature:10149631-10149760:1:exon
so has part: feature:10186793-10186942:1:exon
so has part: feature:10191006-10191151:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:10100568-10100686:1:exon

position:10100686:1
position: 10100686
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:10100775-10100868:1:exon

position:10100775:1
position: 10100775
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:10100868:1
position: 10100868
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:10127994-10128166:1:exon

position:10127994:1
position: 10127994
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:10128166:1
position: 10128166
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:10140319-10140352:1:exon

position:10140319:1
position: 10140319
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:10140352:1
position: 10140352
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:10149631-10149760:1:exon

position:10149631:1
position: 10149631
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:10149760:1
position: 10149760
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:10186793-10186942:1:exon

position:10186793:1
position: 10186793
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:10186942:1
position: 10186942
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:10191006-10191151:1:exon

position:10191006:1
position: 10191006
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

prrg2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 451745
gene: prrg2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transmembrane gamma-carboxyglutamic acid protein 2
translation: MGQLTVRWSDRFGQFLASMAALWVWMILLSLLQMAHCSVTNRHVPGKLVLLDEQSAVSFLSRSLLANNWDFELVVKDDLQRECYDELCNYEEARECFEDDAATKAFWDQYVKDHEPTASRVDMSGLVAGILAIVVTAIIAIVLGVYCYKNKKKTGTARAPVRMAGDGNPAPETVPLAGVVVPPPPLPSYNEALNHSGQHDAPPPPYSGGAPPEPADPGEND
SIO_010081: prrg2
subclass of: SO_0000673
so part of: prrg2
location: join(10100645..10100686,10100775..10100868,10127994..10128166,10140319..10140352,10149631..10149760,10186793..10186942,10191006..10191048)
location: region:10100645-10191048:1
so has part: feature:10100645-10100686:1:exon
so has part: feature:10100775-10100868:1:exon
so has part: feature:10127994-10128166:1:exon
so has part: feature:10140319-10140352:1:exon
so has part: feature:10149631-10149760:1:exon
so has part: feature:10186793-10186942:1:exon
so has part: feature:10191006-10191048:1:exon

XP_037544726.1
type: Protein
SIO_000068: ncbiprotein

position:10100645:1
position: 10100645
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:10191048:1
position: 10191048
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:10100645-10100686:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:10100775-10100868:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:10127994-10128166:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:10140319-10140352:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:10149631-10149760:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:10186793-10186942:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:10191006-10191048:1:exon

LOC119421448
type: Gene
subclass of: SO_0000704
RO_0002162: 451745
gene: LOC119421448
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 10217395..>10241657
location: region:10217395-10241657:1
so has part: feature:10217395-10241657:1:exon
subclass of: SO_0000010

119421448
type: Gene
SIO_000068: ncbigene

position:10217395:1
position: 10217395
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:10241657:1
position: 10241657
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:10217395-10241657:1:exon

LOC119421448
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 451745
gene: LOC119421448
product: proline-rich protein 12
inference: similar to RNA sequence (same species):INSD:GELZ01024696.1
exception: annotated by transcript or proteomic data
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: added 50 bases not found in genome assembly; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_037688801.1
SIO_010081: LOC119421448
subclass of: SO_0000673
so part of: LOC119421448
location: join(10217395..10217611,10223709..10223866,10237022..10237183,10238472..>10241657)
location: region:10217395-10241657:1
so has part: feature:10217395-10217611:1:exon
so has part: feature:10223709-10223866:1:exon
so has part: feature:10237022-10237183:1:exon
so has part: feature:10238472-10241657:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:10217395-10217611:1:exon

position:10217611:1
position: 10217611
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:10223709-10223866:1:exon

position:10223709:1
position: 10223709
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:10223866:1
position: 10223866
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:10237022-10237183:1:exon

position:10237022:1
position: 10237022
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:10237183:1
position: 10237183
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:10238472-10241657:1:exon

position:10238472:1
position: 10238472
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC119421448
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 451745
gene: LOC119421448
inference: similar to RNA sequence (same species):INSD:GELZ01024696.1
exception: annotated by transcript or proteomic data
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: added 41 bases not found in genome assembly; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: proline-rich protein 12
translation: MERNYPAAGFGDLGAGTGWTYDRSAKASLMYGSSRSSHPDPELFHRQAYAAPHPFQGYATNHHPGSSMQGGSWSTPGCTLSLSGLFDTSLHHASPSGPDSSVMNLISALESRGPQPTPSASSLLSQFRTPSWQTAMHTPAPAELFISRALPGSGSFPASSSISAYQHPGSFSGRSFNHSLSLHDAHTFSPTANGLLSPHDPLLPIKAPSQTTLGFDRLLSSQSATYRGSQESPAPPQTQGPPTSSSCHLPLPQFNLLSSQLHNQSSQLYNASMFSSTPGMPPATHHQLQLTPERAVSRQDSVIKHYQSSSPAHSSALQQFASYGELSGYQQIVSHHHQAGMSCSPLGEQSPPTDLKPSLQMESQTYQPIIQTAYAPSSSCSSASSSSATKGPKSSTSSTSGYSSSSSVSSSSRVPHTPPSALSTSSSSKTSSGSLPATPFQQPPPHSAPAPPPLAVASSSCVQQPAAKQCQSNYGSQSVANSSSGLSDQTPPQPHDQSYSPGIPSSSHMTQPFIGFSSPQAKDLNSGAGLTGVKAYTSIGAGGHSFSAEIVFEDSSFDSASLRKESSPCLRYGSESARSGPISGAATHENEVLSVGSESKNVGGNENTNSYHLPESNTSPSLNSTLNHSSLQSSSTVHPAQSPGSSGTTKYMSSILSPAFLPSPQTFPDTRQSQTESYHSTATKPKTEKSLVAAECSQHEEEVADEFLIQHLLHTQTSNPQISQHQSHSQQLPQSFSQAKDEEDKAITYDINRLSDERYHTHSVICTTTSTNTSGPTTALSETSGLNRQLEMSQKKQQTESELVSTEGVHVVSESLSHSHNTKSHQQQHKSLGSSVHYGRGDPYTQHPHSQYPHHTSHMSSHSQPCTQQISQHARHTQHSQHSQHLHQVSHSHSHSHMELKKLSNTNDRGYLCNTPDVQQAQQSQGSLSLMDSSPELPQSTHMLQTVLSHTTHTKMDPQQVLTQHQQQQQQHHSLSQQSMMRGGVESHSQIQSSELQLKLQNHCVDTHYSLASRTRDQIQGSQNSLSPLDMLEQSVSQGSGLDSSGPLDRIRVGVTVPVGGDNGGNRHRQQHRLTSHHHSQQKASDLQNFLSEPDLGVSAPSHLHHLSQPPTHTHSHMLHEQHTHNHHQAQLSHPHPHQFLSNMETPQQQHQSQTRDNETQHIISQLNSHKMHEFDTMSPVDKIRQIQAQQQFPPVISRTEHVLHIRKE
SIO_010081: LOC119421448
subclass of: SO_0000673
so part of: LOC119421448
location: join(10217529..10217611,10223709..10223866,10237022..10237183,10238472..>10241657)
location: region:10217529-10241657:1
so has part: feature:10217529-10217611:1:exon
so has part: feature:10223709-10223866:1:exon
so has part: feature:10237022-10237183:1:exon
so has part: feature:10238472-10241657:1:exon

XP_037544729.1
type: Protein
SIO_000068: ncbiprotein

position:10217529:1
position: 10217529
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:10217529-10217611:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:10223709-10223866:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:10237022-10237183:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:10238472-10241657:1:exon

LOC119421449
type: Gene
subclass of: SO_0000704
RO_0002162: 451745
gene: LOC119421449
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 10260895..10341797
location: region:10260895-10341797:1
so has part: feature:10260895-10341797:1:exon
subclass of: SO_0000010

119421449
type: Gene
SIO_000068: ncbigene

position:10260895:1
position: 10260895
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:10341797:1
position: 10341797
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:10260895-10341797:1:exon

LOC119421449
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 451745
gene: LOC119421449
product: proline-rich protein 12
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 26 Proteins, and 96% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_037688802.1
SIO_010081: LOC119421449
subclass of: SO_0000673
so part of: LOC119421449
location: join(10260895..10260905,10260977..10261781,10275621..10276213,10276295..10276411,10310878..10311011,10311106..10312124,10312202..10312321,10331773..10331870,10331985..10332116,10339475..10339570,10340828..10341797)
location: region:10260895-10341797:1
so has part: feature:10260895-10260905:1:exon
so has part: feature:10260977-10261781:1:exon
so has part: feature:10275621-10276213:1:exon
so has part: feature:10276295-10276411:1:exon
so has part: feature:10310878-10311011:1:exon
so has part: feature:10311106-10312124:1:exon
so has part: feature:10312202-10312321:1:exon
so has part: feature:10331773-10331870:1:exon
so has part: feature:10331985-10332116:1:exon
so has part: feature:10339475-10339570:1:exon
so has part: feature:10340828-10341797:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:10260895-10260905:1:exon

position:10260905:1
position: 10260905
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:10260977-10261781:1:exon

position:10260977:1
position: 10260977
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:10261781:1
position: 10261781
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:10275621-10276213:1:exon

position:10275621:1
position: 10275621
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:10276213:1
position: 10276213
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:10276295-10276411:1:exon

position:10276295:1
position: 10276295
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:10276411:1
position: 10276411
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:10310878-10311011:1:exon

position:10310878:1
position: 10310878
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:10311011:1
position: 10311011
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:10311106-10312124:1:exon

position:10311106:1
position: 10311106
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:10312124:1
position: 10312124
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:10312202-10312321:1:exon

position:10312202:1
position: 10312202
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:10312321:1
position: 10312321
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:10331773-10331870:1:exon

position:10331773:1
position: 10331773
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:10331870:1
position: 10331870
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:10331985-10332116:1:exon

position:10331985:1
position: 10331985
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:10332116:1
position: 10332116
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:10339475-10339570:1:exon

position:10339475:1
position: 10339475
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:10339570:1
position: 10339570
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:10340828-10341797:1:exon

position:10340828:1
position: 10340828
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC119421449
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 451745
gene: LOC119421449
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: proline-rich protein 12
translation: MASFLDFLKTGKKESNLEQGHDGGEKHILDSSSPLNGGIRPLSPPPPSLPPSPPQQPPKSFSDKGCDEVANLALSSCPSPCKPLDEELKRNLETLPSFSSDEEDSVSKNQDLQKSISSAISALYDTPHSLAAVMASTMIKAQPTLPPPMPQEPSLSPPLPAIPPLIPTVENTKEEALIFTQQHTEEEEEQSLISPQPNREKPADQGSEQEEEQKEEDRVEESGNKEPHDLQKKDTESQKEEERSPEMQFLEVPKAEVLAPAYSYLSPSVSPSPPIYSSPSPLPPQSFSVPSPPLIQRGEEEMTPAYQPSEPQPQQSSYQHTPTAGTSPPPSTSPPATLSSPLSNLPLSHSIPPPSATPPPSSSDQDQEPDIGHPSPSSSATLSPSSSSTQPPSPPTPEEAPASQRLTSLHLAKKQADAAIAGQSEEEHSESGGEGIFRERDEFVVRTEDIGTLKMALQTGREPPPIWRVQKALLQKFSPEIKDGQRQFCATSNYLGYFGDAKMRYQRLYVKFLENVNKKDYVRVCSRKPWHRAGLTLRRQSLAKQLLNIHSQSQAWMEREDRDKERQKEREMKEQRTKEKEQREREHREKLEKEQKERERKEEREQIERQKREQMEKEKEERERKEREFREKEKENEREKEQKEQERREAEQKEIEHEEREKMERELKEKERNERERREKEQKEMAQKEREKREKEQKEKERNERERREKEQKEKERKERERRNWEQREKQERENLEKEWQVREREEKERQQIEREKEQNEPKKQESEKQERERREKEKQERDQRERQREQKEQKEKERRDQDKKMKELSERERRDETVEFMRLEENRRAEKKAECRSRTKTSKDVPEPPSKKRRKWMNEVPSSSSESDSSLQSEDEGLMRGGINSRAMWEMFRSYVEMLVSTALDPDMIQALEDTDDELYLPPMRKIDSLLSEQKKGLLRRVSISTQHQEALHLFSKMTADPLDSGVVRVHLGGEGYNRKTLNRVKRSISKQQDMKISIETCRIYSLYHSLHHYKYHTFIHCKNETDNIKQAAEDPGQEEVVQQCMANQGWLESLFNSFVELLSHSAKT
SIO_010081: LOC119421449
subclass of: SO_0000673
so part of: LOC119421449
location: join(10261013..10261781,10275621..10276213,10276295..10276411,10310878..10311011,10311106..10312124,10312202..10312321,10331773..10331870,10331985..10332116,10339475..10339570,10340828..10340962)
location: region:10261013-10340962:1
so has part: feature:10261013-10261781:1:exon
so has part: feature:10275621-10276213:1:exon
so has part: feature:10276295-10276411:1:exon
so has part: feature:10310878-10311011:1:exon
so has part: feature:10311106-10312124:1:exon
so has part: feature:10312202-10312321:1:exon
so has part: feature:10331773-10331870:1:exon
so has part: feature:10331985-10332116:1:exon
so has part: feature:10339475-10339570:1:exon
so has part: feature:10340828-10340962:1:exon

XP_037544730.1
type: Protein
SIO_000068: ncbiprotein

position:10261013:1
position: 10261013
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:10340962:1
position: 10340962
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:10261013-10261781:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:10275621-10276213:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:10276295-10276411:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:10310878-10311011:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:10311106-10312124:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:10312202-10312321:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:10331773-10331870:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:10331985-10332116:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:10339475-10339570:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:10340828-10340962:1:exon

scaf1
type: Gene
subclass of: SO_0000704
RO_0002162: 451745
gene: scaf1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 10535334..10594376
location: region:10535334-10594376:1
so has part: feature:10535334-10594376:1:exon
subclass of: SO_0000010

119421447
type: Gene
SIO_000068: ncbigene

position:10535334:1
position: 10535334
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:10594376:1
position: 10594376
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:10535334-10594376:1:exon

scaf1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 451745
gene: scaf1
product: SR-related CTD-associated factor 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_037688800.1
SIO_010081: scaf1
subclass of: SO_0000673
so part of: scaf1
location: join(10535334..10535493,10541176..10544640,10569827..10569909,10572367..10572672,10585538..10585666,10593172..10594376)
location: region:10535334-10594376:1
so has part: feature:10535334-10535493:1:exon
so has part: feature:10541176-10544640:1:exon
so has part: feature:10569827-10569909:1:exon
so has part: feature:10572367-10572672:1:exon
so has part: feature:10585538-10585666:1:exon
so has part: feature:10593172-10594376:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:10535334-10535493:1:exon

position:10535493:1
position: 10535493
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:10541176-10544640:1:exon

position:10541176:1
position: 10541176
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:10544640:1
position: 10544640
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:10569827-10569909:1:exon

position:10569827:1
position: 10569827
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:10569909:1
position: 10569909
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:10572367-10572672:1:exon

position:10572367:1
position: 10572367
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:10572672:1
position: 10572672
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:10585538-10585666:1:exon

position:10585538:1
position: 10585538
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:10585666:1
position: 10585666
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:10593172-10594376:1:exon

position:10593172:1
position: 10593172
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

scaf1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 451745
gene: scaf1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: splicing factor, arginine/serine-rich 19
translation: MDLTPVFKRRSSDTSSPVGVGETARSPPLCSPSLSPSSPSSSPSSPLSTSSSFCATSSAYQNDVKSQKEVARVSSSSALLTRQPLSTPPFSTTSVDFFPHMSMQSNVEYEEDDRKGEIYDPFSPTDGDKGRRMGDEEEEGEKYDPFDPTGSPASDVDNEIEKEREVATNAEVDDEDKQEEPPDSTDTFTDRLSPCPATQLPLRRRVESSALKAKEHKQNFDSDHSEIEEGEIVTSLDKDGTNKRPTEKVLSLNSPHVSFFGSKPERILRVLDGDGFVSVCTEENWEEDKELQIEPTVGVEDLRRKLVSRRKERYHSFPATSPLSAQPAQPPSLSQASRSSSPLMVPVEQPSKTHKSSKSSNDHDQQKSKDRKAGDKEARRKKRRKGKEGEREKSKEKERGHKAVKEVKTRRSSRSSSRKRKKRRHSSPDASHNTSRRRGHSRRSFSSLSEERQREREREKDKNRDRGRSRERDKERHHHYSSSHRKDERVRDPSSRKRERERTDKRHSRSRERDISKRSRRSLERRDSDRERQHEREHRRDGRPVVPPSIQDLNGADLFAIKRTITVTTTTTTTTVPGSPRLTTASPSHPTQVDHSLKRKKRKWHSVGDAENQESCRSQSQSPSPSRYHGYESDHYSDKLEIDTLSLDGEALDSDYPSLEDTPPPALPPEPPVPSPKVKTPTKPRRNHPKKKSNALKKSESSSSSNRTTSKCLSSLTVTSGSASADLPLAKRGRKMSKDKDRDKGSRKDLSRSGKSKKESGSGRKGKLQSKVSVLVREGVSSTTGSSVGSGKLSMDLLGPGSTGGGTGGSVVGGSIAVVFCRDNESRSPFLKPCSEPLSLGSRSKDLSSMGKRINLAAPPSTLASSAVQKPKKTKTSSITSTSSSASSPSLSLATKRRRRLAKKTSKKGGGVGLAAGNGSQTKALSEGWGRVSLDVQLASGEGSKSVSPRTVQAGPPPCSSSSSTSSSTSALPPSTSPPRTPPPSTAPLRDIRESSPDSQTVDSSCKTPDPSFLVEDCPTQTSPIPPASSPSSLSIPQGAGLNTVLSTPIAKPPPTDDASKSMASPPCSSSSAGLSSFSLPLSSSDLSSSSSVSSSSASKLLPPPPPPPPPTASALPWSLQTGVDCTTGGVLALTALLFKMEEANIASRAKAQEFIQATSQILSQANQSQSQQHVPPSSSSSSSQIPPPPALPPPPGLSPAQFILHSSLPLVGCTKTPPSHLHSSLGGGCAQTPPPIMSVGLSGITGSSGEALLDNEKKDPDKYLKKLHTQERAVEEVKLAIKPYYQRKDINKDEYKDILRKAVHKICHSRTGEINPVKVCNLVKLYVQRYKYFRKHGRKMDEEERDEPGAFHTSV
SIO_010081: scaf1
subclass of: SO_0000673
so part of: scaf1
location: join(10541241..10544640,10569827..10569909,10572367..10572672,10585538..10585666,10593172..10593324)
location: region:10541241-10593324:1
so has part: feature:10541241-10544640:1:exon
so has part: feature:10569827-10569909:1:exon
so has part: feature:10572367-10572672:1:exon
so has part: feature:10585538-10585666:1:exon
so has part: feature:10593172-10593324:1:exon

XP_037544728.1
type: Protein
SIO_000068: ncbiprotein

position:10541241:1
position: 10541241
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:10593324:1
position: 10593324
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:10541241-10544640:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:10569827-10569909:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:10572367-10572672:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:10585538-10585666:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:10593172-10593324:1:exon

snrnp70
type: Gene
subclass of: SO_0000704
RO_0002162: 451745
gene: snrnp70
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 10614686..10695613
location: region:10614686-10695613:1
so has part: feature:10614686-10695613:1:exon
subclass of: SO_0000010

119421450
type: Gene
SIO_000068: ncbigene

position:10614686:1
position: 10614686
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:10695613:1
position: 10695613
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:10614686-10695613:1:exon

snrnp70
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 451745
gene: snrnp70
product: small nuclear ribonucleoprotein 70 (U1)
inference: similar to RNA sequence (same species):INSD:GELZ01037757.1
exception: annotated by transcript or proteomic data
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: added 183 bases not found in genome assembly; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 98% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_037688803.1
SIO_010081: snrnp70
subclass of: SO_0000673
so part of: snrnp70
location: join(10614686..10614861,10615173..10615325,10615412..>10615474,<10680759..10680840,10693874..10693975,10694272..10694371,10694451..10695613)
location: region:10614686-10695613:1
so has part: feature:10614686-10614861:1:exon
so has part: feature:10615173-10615325:1:exon
so has part: feature:10615412-10615474:1:exon
so has part: feature:10680759-10680840:1:exon
so has part: feature:10693874-10693975:1:exon
so has part: feature:10694272-10694371:1:exon
so has part: feature:10694451-10695613:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:10614686-10614861:1:exon

position:10614861:1
position: 10614861
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:10615173-10615325:1:exon

position:10615173:1
position: 10615173
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:10615325:1
position: 10615325
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:10615412-10615474:1:exon

position:10615412:1
position: 10615412
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:10615474:1
position: 10615474
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 4
SIO_000628: feature:10680759-10680840:1:exon

position:10680759:1
position: 10680759
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

position:10680840:1
position: 10680840
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:10693874-10693975:1:exon

position:10693874:1
position: 10693874
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:10693975:1
position: 10693975
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:10694272-10694371:1:exon

position:10694272:1
position: 10694272
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:10694371:1
position: 10694371
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:10694451-10695613:1:exon

position:10694451:1
position: 10694451
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

snrnp70
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 451745
gene: snrnp70
inference: similar to RNA sequence (same species):INSD:GELZ01037757.1
exception: annotated by transcript or proteomic data
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: added 183 bases not found in genome assembly; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: U1 small nuclear ribonucleoprotein 70 kDa
translation: MTQFLPPNLLALFAPRDPIPFLPQLEKLPHEKHHNQPYCGIAPFIRHFEDPRDAPPPTRAETRDERLERKRREKIERRQSVLETELKLWDPHNDPNAQGDAFKTLFVARVNYDTTESKLRREFEVYGPIKRIYIVYNKKTGKPRGYAFIEYEHERDMHSAYKHADGKKIDGRRVLVDVERGRTVKGWRPRRLGGGLGGTRRGGADVNIKHSGRDDASRYDDRSLGADRGDRMERSRERDRDKDRERRRTRSRERRRHSRERERERDRQGGAGEEVSTSSRRRERERERGVAGPGDNKSRERSRDRKRRSRSRDRKRDRERGKGVDGDEVGQVDGIPEGGERVMGEQEGEVAEGTEERRERDREKDRDRRRSHRDRDRRRGDRDRDREHKRERGERDRGERKEERHGSTREDVGPQVEVGNEDNDASTQMEEYSQDGMTDQQSVPSADGYGSGENGYKMEAPDEY
SIO_010081: snrnp70
subclass of: SO_0000673
so part of: snrnp70
location: join(10615179..10615325,10615412..>10615474,<10680759..10680840,10693874..10693975,10694272..10694371,10694451..10695168)
location: region:10615179-10695168:1
so has part: feature:10615179-10615325:1:exon
so has part: feature:10615412-10615474:1:exon
so has part: feature:10680759-10680840:1:exon
so has part: feature:10693874-10693975:1:exon
so has part: feature:10694272-10694371:1:exon
so has part: feature:10694451-10695168:1:exon

XP_037544731.1
type: Protein
SIO_000068: ncbiprotein

position:10615179:1
position: 10615179
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:10695168:1
position: 10695168
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:10615179-10615325:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:10615412-10615474:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:10680759-10680840:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:10693874-10693975:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:10694272-10694371:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:10694451-10695168:1:exon

LOC119422031
type: Gene
subclass of: SO_0000704
RO_0002162: 451745
gene: LOC119422031
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(10724727..>10725449)
location: region:10724727-10725449:-1
so has part: feature:10724727-10725449:-1:exon
subclass of: SO_0000010

119422031
type: Gene
SIO_000068: ncbigene

position:10724727:-1
position: 10724727
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:10725449:-1
position: 10725449
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:10724727-10725449:-1:exon

LOC119422031
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 451745
gene: LOC119422031
product: protein arginine N-methyltransferase 1
inference: similar to RNA sequence (same species):INSD:GELZ01038374.1
exception: annotated by transcript or proteomic data
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: added 1056 bases not found in genome assembly; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_037689372.1
SIO_010081: LOC119422031
subclass of: SO_0000673
so part of: LOC119422031
location: complement(10724727..>10725449)
location: region:10724727-10725449:-1
so has part: feature:10724727-10725449:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:10724727-10725449:-1:exon

LOC119422031
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 451745
gene: LOC119422031
inference: similar to RNA sequence (same species):INSD:GELZ01038374.1
exception: annotated by transcript or proteomic data
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: added 960 bases not found in genome assembly; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein arginine N-methyltransferase 1
translation: MEMAAPAERMEGESSVKPAAEDMTSKDYYFDSYAHFGIHEEMLKDEVRTLTYRNSMFHNKHLFKDKVVLDVGSGTGILCMFAAKAGAKKVIGIECSSISDYAVKIVKANNLDDVVTIIKGKVEEVELPVDGVDIIISEWMGYCLFYESMLNTVIYARDKWLKPDGLIFPDRATLYVTAIEDRQYKDYKIHWWENVYGFDMSCIKEVAIKEPLVDVVDPKQLVSNSCLIREVDIYTVKVEDLTFTSPFCLQVKRNDYIHALVTYFNIEFTRCHKRIGFSTSPESPYTHWKQTVFYLDDYLTVKTGEEIFGTISMKPNAKNNRDLDFAVDVDFRGQLCDMSKTLEYRMR
SIO_010081: LOC119422031
subclass of: SO_0000673
so part of: LOC119422031
location: complement(10725366..>10725449)
location: region:10725366-10725449:-1
so has part: feature:10725366-10725449:-1:exon

XP_037545300.1
type: Protein
SIO_000068: ncbiprotein

position:10725366:-1
position: 10725366
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:10725366-10725449:-1:exon

prmt1
type: Gene
subclass of: SO_0000704
RO_0002162: 451745
gene: prmt1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 10735507..>10742963
location: region:10735507-10742963:1
so has part: feature:10735507-10742963:1:exon
subclass of: SO_0000010

119422032
type: Gene
SIO_000068: ncbigene

position:10735507:1
position: 10735507
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:10742963:1
position: 10742963
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:10735507-10742963:1:exon

prmt1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 451745
gene: prmt1
product: protein arginine methyltransferase 1, transcript variant X1
inference: similar to RNA sequence (same species):INSD:GELZ01038372.1
exception: annotated by transcript or proteomic data
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: added 878 bases not found in genome assembly; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 54 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_037689373.1
SIO_010081: prmt1
subclass of: SO_0000673
so part of: prmt1
location: join(10735507..10735616,10737755..10737850,10737939..10738094,10740409..10740472,10740543..10740685,10741541..10741628,10742609..10742724,10742813..>10742963)
location: region:10735507-10742963:1
so has part: feature:10735507-10735616:1:exon
so has part: feature:10737755-10737850:1:exon
so has part: feature:10737939-10738094:1:exon
so has part: feature:10740409-10740472:1:exon
so has part: feature:10740543-10740685:1:exon
so has part: feature:10741541-10741628:1:exon
so has part: feature:10742609-10742724:1:exon
so has part: feature:10742813-10742963:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:10735507-10735616:1:exon

position:10735616:1
position: 10735616
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:10737755-10737850:1:exon

position:10737755:1
position: 10737755
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:10737850:1
position: 10737850
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:10737939-10738094:1:exon

position:10737939:1
position: 10737939
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:10738094:1
position: 10738094
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:10740409-10740472:1:exon

position:10740409:1
position: 10740409
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:10740472:1
position: 10740472
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:10740543-10740685:1:exon

position:10740543:1
position: 10740543
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:10740685:1
position: 10740685
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:10741541-10741628:1:exon

position:10741541:1
position: 10741541
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:10741628:1
position: 10741628
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:10742609-10742724:1:exon

position:10742609:1
position: 10742609
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:10742724:1
position: 10742724
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:10742813-10742963:1:exon

position:10742813:1
position: 10742813
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

prmt1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 451745
gene: prmt1
product: protein arginine methyltransferase 1, transcript variant X2
inference: similar to RNA sequence (same species):INSD:GELZ01038372.1
exception: annotated by transcript or proteomic data
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: added 878 bases not found in genome assembly; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 51 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_037689374.1
SIO_010081: prmt1
subclass of: SO_0000673
so part of: prmt1
location: join(10735507..10735616,10737764..10737850,10737939..10738094,10740409..10740472,10740543..10740685,10741541..10741628,10742609..10742724,10742813..>10742963)
location: region:10735507-10742963:1
so has part: feature:10735507-10735616:1:exon
so has part: feature:10737764-10737850:1:exon
so has part: feature:10737939-10738094:1:exon
so has part: feature:10740409-10740472:1:exon
so has part: feature:10740543-10740685:1:exon
so has part: feature:10741541-10741628:1:exon
so has part: feature:10742609-10742724:1:exon
so has part: feature:10742813-10742963:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:10735507-10735616:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:10737764-10737850:1:exon

position:10737764:1
position: 10737764
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:10737939-10738094:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:10740409-10740472:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:10740543-10740685:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:10741541-10741628:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:10742609-10742724:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:10742813-10742963:1:exon

prmt1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 451745
gene: prmt1
inference: similar to RNA sequence (same species):INSD:GELZ01038372.1
exception: annotated by transcript or proteomic data
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: added 206 bases not found in genome assembly; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein arginine N-methyltransferase 1 isoform X1
translation: MEMAAPAERMEVSQGESSVKPAAEDMTSKDYYFDSYAHFGIHEEMLKDEVRTLTYRNSMFHNKHLFKDKVVLDVGSGTGILCMFAAKAGAKKVIGIECSSISDYAVKIVKANNLDDVVTIIKGKVEEVELPVDGVDIIISEWMGYCLFYESMLNTVIYARDKWLKPDGLIFPDRATLYVTAIEDRQYKDYKIHWWENVYGFDMSCIKEVAIKEPLVDVVDPKQLVSNSCLIREVDIYTVKVEDLTFTSPFCLQVKRNDYIHALVTYFNIEFTRCHKRIGFSTSPESPYTHWKQTVFYLDDYLTVKTGEEIFGTISMKPNAKNNRDLDFAVDVDFRGQLCDMSKTLEYRMR
SIO_010081: prmt1
subclass of: SO_0000673
so part of: prmt1
location: join(10735584..10735616,10737755..10737850,10737939..10738094,10740409..10740472,10740543..10740685,10741541..10741628,10742609..10742724,10742813..>10742963)
location: region:10735584-10742963:1
so has part: feature:10735584-10735616:1:exon
so has part: feature:10737755-10737850:1:exon
so has part: feature:10737939-10738094:1:exon
so has part: feature:10740409-10740472:1:exon
so has part: feature:10740543-10740685:1:exon
so has part: feature:10741541-10741628:1:exon
so has part: feature:10742609-10742724:1:exon
so has part: feature:10742813-10742963:1:exon

XP_037545301.1
type: Protein
SIO_000068: ncbiprotein

position:10735584:1
position: 10735584
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:10735584-10735616:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:10737755-10737850:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:10737939-10738094:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:10740409-10740472:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:10740543-10740685:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:10741541-10741628:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:10742609-10742724:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:10742813-10742963:1:exon

prmt1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 451745
gene: prmt1
inference: similar to RNA sequence (same species):INSD:GELZ01038372.1
exception: annotated by transcript or proteomic data
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: added 206 bases not found in genome assembly; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein arginine N-methyltransferase 1 isoform X2
translation: MEMAAPAERMEGESSVKPAAEDMTSKDYYFDSYAHFGIHEEMLKDEVRTLTYRNSMFHNKHLFKDKVVLDVGSGTGILCMFAAKAGAKKVIGIECSSISDYAVKIVKANNLDDVVTIIKGKVEEVELPVDGVDIIISEWMGYCLFYESMLNTVIYARDKWLKPDGLIFPDRATLYVTAIEDRQYKDYKIHWWENVYGFDMSCIKEVAIKEPLVDVVDPKQLVSNSCLIREVDIYTVKVEDLTFTSPFCLQVKRNDYIHALVTYFNIEFTRCHKRIGFSTSPESPYTHWKQTVFYLDDYLTVKTGEEIFGTISMKPNAKNNRDLDFAVDVDFRGQLCDMSKTLEYRMR
SIO_010081: prmt1
subclass of: SO_0000673
so part of: prmt1
location: join(10735584..10735616,10737764..10737850,10737939..10738094,10740409..10740472,10740543..10740685,10741541..10741628,10742609..10742724,10742813..>10742963)
location: region:10735584-10742963:1
so has part: feature:10735584-10735616:1:exon
so has part: feature:10737764-10737850:1:exon
so has part: feature:10737939-10738094:1:exon
so has part: feature:10740409-10740472:1:exon
so has part: feature:10740543-10740685:1:exon
so has part: feature:10741541-10741628:1:exon
so has part: feature:10742609-10742724:1:exon
so has part: feature:10742813-10742963:1:exon

XP_037545302.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:10735584-10735616:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:10737764-10737850:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:10737939-10738094:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:10740409-10740472:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:10740543-10740685:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:10741541-10741628:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:10742609-10742724:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:10742813-10742963:1:exon

ppp1r35
type: Gene
subclass of: SO_0000704
RO_0002162: 451745
gene: ppp1r35
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(10792824..10852053)
location: region:10792824-10852053:-1
so has part: feature:10792824-10852053:-1:exon
subclass of: SO_0000010

119422033
type: Gene
SIO_000068: ncbigene

position:10792824:-1
position: 10792824
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:10852053:-1
position: 10852053
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:10792824-10852053:-1:exon

ppp1r35
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 451745
gene: ppp1r35
product: protein phosphatase 1, regulatory subunit 35
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 32% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_037689375.1
SIO_010081: ppp1r35
subclass of: SO_0000673
so part of: ppp1r35
location: complement(join(10792824..10793125,10793726..10793816,10816925..10817040,10818283..10818388,10851847..10852053))
location: region:10792824-10852053:-1
so has part: feature:10851847-10852053:-1:exon
so has part: feature:10818283-10818388:-1:exon
so has part: feature:10816925-10817040:-1:exon
so has part: feature:10793726-10793816:-1:exon
so has part: feature:10792824-10793125:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:10851847-10852053:-1:exon

position:10851847:-1
position: 10851847
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:10818283-10818388:-1:exon

position:10818283:-1
position: 10818283
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:10818388:-1
position: 10818388
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:10816925-10817040:-1:exon

position:10816925:-1
position: 10816925
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:10817040:-1
position: 10817040
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:10793726-10793816:-1:exon

position:10793726:-1
position: 10793726
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:10793816:-1
position: 10793816
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:10792824-10793125:-1:exon

position:10793125:-1
position: 10793125
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

ppp1r35
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 451745
gene: ppp1r35
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein phosphatase 1 regulatory subunit 35
translation: MSFSPSSSLPPSPHPAPIPLSSSSSVKCCPELDLSVTLSPASKTDHTLQKLCHPKPSQQGQTGKRRNGKVCFKEPVTVTVTSEPQLLPAQQRRKGSRKNTGRRHAVSHSVATPTAQLLPDPGCLKRAEFNTTLTLKAEFHSLQGAEFNSQKALQETLQKSERTKNLINARAAEVVNVSRSQLLFNSLVSVSVPDDQLISQVLQDRLLLAPPRCHDPEPVEGPSLLFFTTSDLIRQKPLPQEEEPGTQKPLPMPRPAYFTFDLFKRRRCWEATP
SIO_010081: ppp1r35
subclass of: SO_0000673
so part of: ppp1r35
location: complement(join(10792824..10793125,10793726..10793816,10816925..10817040,10818283..10818388,10851847..10852053))
location: region:10792824-10852053:-1
so has part: feature:10851847-10852053:-1:exon
so has part: feature:10818283-10818388:-1:exon
so has part: feature:10816925-10817040:-1:exon
so has part: feature:10793726-10793816:-1:exon
so has part: feature:10792824-10793125:-1:exon

XP_037545303.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:10851847-10852053:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:10818283-10818388:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:10816925-10817040:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:10793726-10793816:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:10792824-10793125:-1:exon

lin7b
type: Gene
subclass of: SO_0000704
RO_0002162: 451745
gene: lin7b
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(10857371..10873600)
location: region:10857371-10873600:-1
so has part: feature:10857371-10873600:-1:exon
subclass of: SO_0000010

119422035
type: Gene
SIO_000068: ncbigene

position:10857371:-1
position: 10857371
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:10873600:-1
position: 10873600
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:10857371-10873600:-1:exon

lin7b
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 451745
gene: lin7b
product: lin-7 homolog B (C. elegans)
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 27 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_037689376.1
SIO_010081: lin7b
subclass of: SO_0000673
so part of: lin7b
location: complement(join(10857371..10857866,10862630..10862793,10865938..10866147,10867777..10867848,10867994..10868112,10873370..10873600))
location: region:10857371-10873600:-1
so has part: feature:10873370-10873600:-1:exon
so has part: feature:10867994-10868112:-1:exon
so has part: feature:10867777-10867848:-1:exon
so has part: feature:10865938-10866147:-1:exon
so has part: feature:10862630-10862793:-1:exon
so has part: feature:10857371-10857866:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:10873370-10873600:-1:exon

position:10873370:-1
position: 10873370
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:10867994-10868112:-1:exon

position:10867994:-1
position: 10867994
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:10868112:-1
position: 10868112
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:10867777-10867848:-1:exon

position:10867777:-1
position: 10867777
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:10867848:-1
position: 10867848
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:10865938-10866147:-1:exon

position:10865938:-1
position: 10865938
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:10866147:-1
position: 10866147
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:10862630-10862793:-1:exon

position:10862630:-1
position: 10862630
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:10862793:-1
position: 10862793
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:10857371-10857866:-1:exon

position:10857866:-1
position: 10857866
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

lin7b
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 451745
gene: lin7b
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein lin-7 homolog B
translation: MISSFYHPAKDADMAATSEPLCLERDVCRVIELLDRLQRTGELPPPKLQALQRVLQSKFCAAIREVYEQLYDTLDIVGGPEVRAQATAKATVAAFAASEGHAHPRVVELPKTEEGLGFNIMGGKEQNSPIYISRVIPGGVADRQGGLKRGDQLLSVNGVSVEAEQHEKAVELLKAAQGSVKLVVRYTPKVLEEMEARFEKMRSARRRQQHSSYSSLESRG
SIO_010081: lin7b
subclass of: SO_0000673
so part of: lin7b
location: complement(join(10857845..10857866,10862630..10862793,10865938..10866147,10867777..10867848,10867994..10868112,10873370..10873445))
location: region:10857845-10873445:-1
so has part: feature:10873370-10873445:-1:exon
so has part: feature:10867994-10868112:-1:exon
so has part: feature:10867777-10867848:-1:exon
so has part: feature:10865938-10866147:-1:exon
so has part: feature:10862630-10862793:-1:exon
so has part: feature:10857845-10857866:-1:exon

XP_037545304.1
type: Protein
SIO_000068: ncbiprotein

position:10857845:-1
position: 10857845
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:10873445:-1
position: 10873445
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:10873370-10873445:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:10867994-10868112:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:10867777-10867848:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:10865938-10866147:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:10862630-10862793:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:10857845-10857866:-1:exon

LOC119421956
type: Gene
subclass of: SO_0000704
RO_0002162: 451745
gene: LOC119421956
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(11058722..11275905)
location: region:11058722-11275905:-1
so has part: feature:11058722-11275905:-1:exon
subclass of: SO_0000010

119421956
type: Gene
SIO_000068: ncbigene

position:11058722:-1
position: 11058722
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:11275905:-1
position: 11275905
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11058722-11275905:-1:exon

LOC119421956
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 451745
gene: LOC119421956
product: multidrug resistance-associated protein 1-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 15 Proteins, and 25% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_037689314.1
SIO_010081: LOC119421956
subclass of: SO_0000673
so part of: LOC119421956
location: complement(join(11058722..11058830,11078114..11078308,11080164..11080330,11085854..11086012,11124628..11124678,11138522..11138532,11138661..11138835,11143702..11143869,11144523..11144699,11159778..11159879,11160948..11161074,11162240..11162439,11165325..11165635,11165716..11165923,11166786..11166971,11171379..11171505,11171662..11171731,11173168..11173255,11178669..11178815,11178938..11179141,11179234..11179326,11182050..11182211,11182346..11182523,11188319..11188543,11199479..11199610,11212209..11212270,11212851..11212976,11217401..11217538,11249071..11249199,11268199..11268375,11275858..11275905))
location: region:11058722-11275905:-1
so has part: feature:11275858-11275905:-1:exon
so has part: feature:11268199-11268375:-1:exon
so has part: feature:11249071-11249199:-1:exon
so has part: feature:11217401-11217538:-1:exon
so has part: feature:11212851-11212976:-1:exon
so has part: feature:11212209-11212270:-1:exon
so has part: feature:11199479-11199610:-1:exon
so has part: feature:11188319-11188543:-1:exon
so has part: feature:11182346-11182523:-1:exon
so has part: feature:11182050-11182211:-1:exon
so has part: feature:11179234-11179326:-1:exon
so has part: feature:11178938-11179141:-1:exon
so has part: feature:11178669-11178815:-1:exon
so has part: feature:11173168-11173255:-1:exon
so has part: feature:11171662-11171731:-1:exon
so has part: feature:11171379-11171505:-1:exon
so has part: feature:11166786-11166971:-1:exon
so has part: feature:11165716-11165923:-1:exon
so has part: feature:11165325-11165635:-1:exon
so has part: feature:11162240-11162439:-1:exon
so has part: feature:11160948-11161074:-1:exon
so has part: feature:11159778-11159879:-1:exon
so has part: feature:11144523-11144699:-1:exon
so has part: feature:11143702-11143869:-1:exon
so has part: feature:11138661-11138835:-1:exon
so has part: feature:11138522-11138532:-1:exon
so has part: feature:11124628-11124678:-1:exon
so has part: feature:11085854-11086012:-1:exon
so has part: feature:11080164-11080330:-1:exon
so has part: feature:11078114-11078308:-1:exon
so has part: feature:11058722-11058830:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:11275858-11275905:-1:exon

position:11275858:-1
position: 11275858
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:11268199-11268375:-1:exon

position:11268199:-1
position: 11268199
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:11268375:-1
position: 11268375
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:11249071-11249199:-1:exon

position:11249071:-1
position: 11249071
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:11249199:-1
position: 11249199
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:11217401-11217538:-1:exon

position:11217401:-1
position: 11217401
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:11217538:-1
position: 11217538
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:11212851-11212976:-1:exon

position:11212851:-1
position: 11212851
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:11212976:-1
position: 11212976
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:11212209-11212270:-1:exon

position:11212209:-1
position: 11212209
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:11212270:-1
position: 11212270
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:11199479-11199610:-1:exon

position:11199479:-1
position: 11199479
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:11199610:-1
position: 11199610
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:11188319-11188543:-1:exon

position:11188319:-1
position: 11188319
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:11188543:-1
position: 11188543
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:11182346-11182523:-1:exon

position:11182346:-1
position: 11182346
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:11182523:-1
position: 11182523
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:11182050-11182211:-1:exon

position:11182050:-1
position: 11182050
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:11182211:-1
position: 11182211
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:11179234-11179326:-1:exon

position:11179234:-1
position: 11179234
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:11179326:-1
position: 11179326
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:11178938-11179141:-1:exon

position:11178938:-1
position: 11178938
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:11179141:-1
position: 11179141
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:11178669-11178815:-1:exon

position:11178669:-1
position: 11178669
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:11178815:-1
position: 11178815
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:11173168-11173255:-1:exon

position:11173168:-1
position: 11173168
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:11173255:-1
position: 11173255
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:11171662-11171731:-1:exon

position:11171662:-1
position: 11171662
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:11171731:-1
position: 11171731
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:11171379-11171505:-1:exon

position:11171379:-1
position: 11171379
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:11171505:-1
position: 11171505
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:11166786-11166971:-1:exon

position:11166786:-1
position: 11166786
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:11166971:-1
position: 11166971
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:11165716-11165923:-1:exon

position:11165716:-1
position: 11165716
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:11165923:-1
position: 11165923
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:11165325-11165635:-1:exon

position:11165325:-1
position: 11165325
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:11165635:-1
position: 11165635
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:11162240-11162439:-1:exon

position:11162240:-1
position: 11162240
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:11162439:-1
position: 11162439
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:11160948-11161074:-1:exon

position:11160948:-1
position: 11160948
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:11161074:-1
position: 11161074
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:11159778-11159879:-1:exon

position:11159778:-1
position: 11159778
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:11159879:-1
position: 11159879
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:11144523-11144699:-1:exon

position:11144523:-1
position: 11144523
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:11144699:-1
position: 11144699
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:11143702-11143869:-1:exon

position:11143702:-1
position: 11143702
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:11143869:-1
position: 11143869
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:11138661-11138835:-1:exon

position:11138661:-1
position: 11138661
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:11138835:-1
position: 11138835
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 26
SIO_000628: feature:11138522-11138532:-1:exon

position:11138522:-1
position: 11138522
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:11138532:-1
position: 11138532
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 27
SIO_000628: feature:11124628-11124678:-1:exon

position:11124628:-1
position: 11124628
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:11124678:-1
position: 11124678
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 28
SIO_000628: feature:11085854-11086012:-1:exon

position:11085854:-1
position: 11085854
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:11086012:-1
position: 11086012
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 29
SIO_000628: feature:11080164-11080330:-1:exon

position:11080164:-1
position: 11080164
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:11080330:-1
position: 11080330
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 30
SIO_000628: feature:11078114-11078308:-1:exon

position:11078114:-1
position: 11078114
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:11078308:-1
position: 11078308
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 31
SIO_000628: feature:11058722-11058830:-1:exon

position:11058830:-1
position: 11058830
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC119421956
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 451745
gene: LOC119421956
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: multidrug resistance-associated protein 1-like
translation: MGVEKFCSPNSSDPLWDWNLTWHISNPDFTQCFQNTVLVWVPCLYLWICAPVYLIYLRCNDRGYICMSYLNKAKTAVGFLLWIICWSDVFYTFWERSHNSSVSAPVHLISPTLLGLTMLLSTLIIQYERLKGVQSSGVMLIFWLLILLCATIPFRSKILQALNQPEMVCIWRYTTFYIYYALLLIALILSALTDRPPLFSQAVKDTNPCPEPGASFLSRITFWWITRMMVTGYRRPLEEKDLWSLNAEDCSHKVVPQLVHCWNSECQKVKRSEHKTIYSLRPAPHGERKEADAVEEAEILIKSSKKTKEPSLFWALCLTFGPYFLISCLYKIIQDILMFVGPEILRLLIHFVNDSSAPSWQGFFYTALLFICTCVQSLILQKYFHVCFVSGMRLRTAIIGAVYRKALVISNTARRTSTVGEIVNLMSVDAQRFMDLITYINMIWSAPLQVVLALYFLWQNLGPSVLAGVAVMVLMVPINAVIAMKTKTYQVAQMKSKDNRIKLMNEMLNGIKVLKLYAWELAFQGKVSEIREGELRVLKKAAYLGAMSTFTWICAPFLVALSTFSVYVLIDEQNVLDAQKAFVSLALFNILRFPLNMLPMVISSMVQASVSLKRLRVFLSHEELQEDSVEHKTLAGSPNSVSIVDGVFSWSKTESPTLKRLNVCIPEGSLVAVVGLVGSGKSSLLSVLLGEMDKLEGSVAVKDFTHFFLTIYFYFLTLYHCLFVCSSAGSEMSPKIKDNKDLVKKTKNPEVGKLTEADKASTGRVKLSVFWAYLKAIGVLLSFISLLLFLTHHLLSLFSNYWLSLWTDDPVVNGTQPNRSMRLGVYGGLGLTQGVAVFGYSLSMSIGGILASRYLHQSLLCDVLRSPMSFFERTPSGNLVNRFAKEMDTIDSVIPMIIKMFLGSMFNVMGSCVIILMATPLVAIIIPFLGLLYFFVQRFYVASSRQLKRLESVSRSPIYTHFNETLLGTSVIRAFGEQQRFICESDKRVDHNQKAYYPSIVANRWLAIRLEFVGNCIVSFAALFAVIARESLSPGIMGLSISYALQLTASLTWLVRMSSDVETNIVAVEKVKEYCDTDKEGSVAYVPQQAWIQNATLKENIIFGQEQREDWYQQVVEACALQPDLEILPAGDETEIGEKGVNLSGGQKQRVSLARAVYCDRAVYLLDDPLSAVDAHVGKHIFDHVVGPQGLLKDKTRVLVTHGLSYLPQTDLILVMVEGEITEVGSYQQLMAKDGAFAEFQRTYASVDQTEDIADMQLVLTRDVSVSNLKIGDNVGIVGRTGAGKSSLTLGLFRIIEAAEGHILIDGVDIAKLGLHELRSRITIIPQDPVLFSGSLRMNLDPFDFYSDEDIWKALEFSHLKSFVSGLPGQLSHECSEGGENLSVGQRQLLCLARALLRKTKVLVLDEATAAVDMETDNLIQSTIRSQFEDCTVLTIAHRLNTIMDYTRVLVLEKGEMAEFDSPSSLISQKGAFYRMAKDAGLV
SIO_010081: LOC119421956
subclass of: SO_0000673
so part of: LOC119421956
location: complement(join(11058722..11058830,11078114..11078308,11080164..11080330,11085854..11086012,11124628..11124678,11138522..11138532,11138661..11138835,11143702..11143869,11144523..11144699,11159778..11159879,11160948..11161074,11162240..11162439,11165325..11165635,11165716..11165923,11166786..11166971,11171379..11171505,11171662..11171731,11173168..11173255,11178669..11178815,11178938..11179141,11179234..11179326,11182050..11182211,11182346..11182523,11188319..11188543,11199479..11199610,11212209..11212270,11212851..11212976,11217401..11217538,11249071..11249199,11268199..11268375,11275858..11275905))
location: region:11058722-11275905:-1
so has part: feature:11275858-11275905:-1:exon
so has part: feature:11268199-11268375:-1:exon
so has part: feature:11249071-11249199:-1:exon
so has part: feature:11217401-11217538:-1:exon
so has part: feature:11212851-11212976:-1:exon
so has part: feature:11212209-11212270:-1:exon
so has part: feature:11199479-11199610:-1:exon
so has part: feature:11188319-11188543:-1:exon
so has part: feature:11182346-11182523:-1:exon
so has part: feature:11182050-11182211:-1:exon
so has part: feature:11179234-11179326:-1:exon
so has part: feature:11178938-11179141:-1:exon
so has part: feature:11178669-11178815:-1:exon
so has part: feature:11173168-11173255:-1:exon
so has part: feature:11171662-11171731:-1:exon
so has part: feature:11171379-11171505:-1:exon
so has part: feature:11166786-11166971:-1:exon
so has part: feature:11165716-11165923:-1:exon
so has part: feature:11165325-11165635:-1:exon
so has part: feature:11162240-11162439:-1:exon
so has part: feature:11160948-11161074:-1:exon
so has part: feature:11159778-11159879:-1:exon
so has part: feature:11144523-11144699:-1:exon
so has part: feature:11143702-11143869:-1:exon
so has part: feature:11138661-11138835:-1:exon
so has part: feature:11138522-11138532:-1:exon
so has part: feature:11124628-11124678:-1:exon
so has part: feature:11085854-11086012:-1:exon
so has part: feature:11080164-11080330:-1:exon
so has part: feature:11078114-11078308:-1:exon
so has part: feature:11058722-11058830:-1:exon

XP_037545242.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:11275858-11275905:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:11268199-11268375:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:11249071-11249199:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:11217401-11217538:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:11212851-11212976:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:11212209-11212270:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:11199479-11199610:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:11188319-11188543:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:11182346-11182523:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:11182050-11182211:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:11179234-11179326:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:11178938-11179141:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:11178669-11178815:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:11173168-11173255:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:11171662-11171731:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:11171379-11171505:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:11166786-11166971:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:11165716-11165923:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:11165325-11165635:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:11162240-11162439:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:11160948-11161074:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:11159778-11159879:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:11144523-11144699:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:11143702-11143869:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:11138661-11138835:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:11138522-11138532:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:11124628-11124678:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:11085854-11086012:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:11080164-11080330:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:11078114-11078308:-1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:11058722-11058830:-1:exon

LOC119422036
type: Gene
subclass of: SO_0000704
RO_0002162: 451745
gene: LOC119422036
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(11409347..11445538)
location: region:11409347-11445538:-1
so has part: feature:11409347-11445538:-1:exon
subclass of: SO_0000010

119422036
type: Gene
SIO_000068: ncbigene

position:11409347:-1
position: 11409347
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:11445538:-1
position: 11445538
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11409347-11445538:-1:exon

LOC119422036
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 451745
gene: LOC119422036
product: acidic repeat-containing protein
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 75% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_037689377.1
SIO_010081: LOC119422036
subclass of: SO_0000673
so part of: LOC119422036
location: complement(join(11409347..11409593,11409675..11409711,11413795..11413846,11417455..11417523,11431607..11431692,11444643..11445538))
location: region:11409347-11445538:-1
so has part: feature:11444643-11445538:-1:exon
so has part: feature:11431607-11431692:-1:exon
so has part: feature:11417455-11417523:-1:exon
so has part: feature:11413795-11413846:-1:exon
so has part: feature:11409675-11409711:-1:exon
so has part: feature:11409347-11409593:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:11444643-11445538:-1:exon

position:11444643:-1
position: 11444643
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:11431607-11431692:-1:exon

position:11431607:-1
position: 11431607
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:11431692:-1
position: 11431692
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:11417455-11417523:-1:exon

position:11417455:-1
position: 11417455
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:11417523:-1
position: 11417523
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:11413795-11413846:-1:exon

position:11413795:-1
position: 11413795
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:11413846:-1
position: 11413846
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:11409675-11409711:-1:exon

position:11409675:-1
position: 11409675
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:11409711:-1
position: 11409711
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:11409347-11409593:-1:exon

position:11409593:-1
position: 11409593
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC119422036
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 451745
gene: LOC119422036
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: acidic repeat-containing protein
translation: MASLRSLILALLLALLCSFHTPLAPTAKAQDLPFRNEEGLMADDDDDDGNDDDDDDDDDEDDDDDDNDDDDEDEDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDEDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDHEGDDDDDDDDDDDDGAYHKGSLCSYCEFCEHCDICDKCPCKEGDNSEHCDDCKMCSFCHVCPVCETVCKPGGFVDEVTGSIYKTVADVFDDDDAN
SIO_010081: LOC119422036
subclass of: SO_0000673
so part of: LOC119422036
location: complement(join(11409554..11409593,11409675..11409711,11413795..11413846,11417455..11417523,11431607..11431692,11444643..11445153))
location: region:11409554-11445153:-1
so has part: feature:11444643-11445153:-1:exon
so has part: feature:11431607-11431692:-1:exon
so has part: feature:11417455-11417523:-1:exon
so has part: feature:11413795-11413846:-1:exon
so has part: feature:11409675-11409711:-1:exon
so has part: feature:11409554-11409593:-1:exon

XP_037545305.1
type: Protein
SIO_000068: ncbiprotein

position:11409554:-1
position: 11409554
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:11445153:-1
position: 11445153
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11444643-11445153:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:11431607-11431692:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:11417455-11417523:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:11413795-11413846:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:11409675-11409711:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:11409554-11409593:-1:exon

trpm4a
type: Gene
subclass of: SO_0000704
RO_0002162: 451745
gene: trpm4a
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(11528317..11645220)
location: region:11528317-11645220:-1
so has part: feature:11528317-11645220:-1:exon
subclass of: SO_0000010

119421957
type: Gene
SIO_000068: ncbigene

position:11528317:-1
position: 11528317
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:11645220:-1
position: 11645220
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11528317-11645220:-1:exon

trpm4a
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 451745
gene: trpm4a
product: transient receptor potential cation channel, subfamily M, member 4a
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 96% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_037689315.1
SIO_010081: trpm4a
subclass of: SO_0000673
so part of: trpm4a
location: complement(join(11528317..11528518,11541642..11541735,11543217..11543289,11555810..11555988,11559429..11559561,11564948..11565069,11565801..11566039,11568211..11568257,11568351..11568455,11568634..11568746,11576109..11576254,11577639..11577768,11580978..11581106,11583319..11583420,11591107..11591406,11600167..11600285,11600514..11600616,11605846..11606064,11609495..11609559,11609738..11609915,11610018..11610187,11610295..11610475,11620733..11620910,11625403..11625461,11645123..11645220))
location: region:11528317-11645220:-1
so has part: feature:11645123-11645220:-1:exon
so has part: feature:11625403-11625461:-1:exon
so has part: feature:11620733-11620910:-1:exon
so has part: feature:11610295-11610475:-1:exon
so has part: feature:11610018-11610187:-1:exon
so has part: feature:11609738-11609915:-1:exon
so has part: feature:11609495-11609559:-1:exon
so has part: feature:11605846-11606064:-1:exon
so has part: feature:11600514-11600616:-1:exon
so has part: feature:11600167-11600285:-1:exon
so has part: feature:11591107-11591406:-1:exon
so has part: feature:11583319-11583420:-1:exon
so has part: feature:11580978-11581106:-1:exon
so has part: feature:11577639-11577768:-1:exon
so has part: feature:11576109-11576254:-1:exon
so has part: feature:11568634-11568746:-1:exon
so has part: feature:11568351-11568455:-1:exon
so has part: feature:11568211-11568257:-1:exon
so has part: feature:11565801-11566039:-1:exon
so has part: feature:11564948-11565069:-1:exon
so has part: feature:11559429-11559561:-1:exon
so has part: feature:11555810-11555988:-1:exon
so has part: feature:11543217-11543289:-1:exon
so has part: feature:11541642-11541735:-1:exon
so has part: feature:11528317-11528518:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:11645123-11645220:-1:exon

position:11645123:-1
position: 11645123
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:11625403-11625461:-1:exon

position:11625403:-1
position: 11625403
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:11625461:-1
position: 11625461
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:11620733-11620910:-1:exon

position:11620733:-1
position: 11620733
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:11620910:-1
position: 11620910
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:11610295-11610475:-1:exon

position:11610295:-1
position: 11610295
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:11610475:-1
position: 11610475
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:11610018-11610187:-1:exon

position:11610018:-1
position: 11610018
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:11610187:-1
position: 11610187
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:11609738-11609915:-1:exon

position:11609738:-1
position: 11609738
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:11609915:-1
position: 11609915
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:11609495-11609559:-1:exon

position:11609495:-1
position: 11609495
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:11609559:-1
position: 11609559
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:11605846-11606064:-1:exon

position:11605846:-1
position: 11605846
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:11606064:-1
position: 11606064
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:11600514-11600616:-1:exon

position:11600514:-1
position: 11600514
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:11600616:-1
position: 11600616
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:11600167-11600285:-1:exon

position:11600167:-1
position: 11600167
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:11600285:-1
position: 11600285
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:11591107-11591406:-1:exon

position:11591107:-1
position: 11591107
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:11591406:-1
position: 11591406
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:11583319-11583420:-1:exon

position:11583319:-1
position: 11583319
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:11583420:-1
position: 11583420
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:11580978-11581106:-1:exon

position:11580978:-1
position: 11580978
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:11581106:-1
position: 11581106
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:11577639-11577768:-1:exon

position:11577639:-1
position: 11577639
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:11577768:-1
position: 11577768
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:11576109-11576254:-1:exon

position:11576109:-1
position: 11576109
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:11576254:-1
position: 11576254
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:11568634-11568746:-1:exon

position:11568634:-1
position: 11568634
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:11568746:-1
position: 11568746
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:11568351-11568455:-1:exon

position:11568351:-1
position: 11568351
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:11568455:-1
position: 11568455
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:11568211-11568257:-1:exon

position:11568211:-1
position: 11568211
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:11568257:-1
position: 11568257
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:11565801-11566039:-1:exon

position:11565801:-1
position: 11565801
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:11566039:-1
position: 11566039
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:11564948-11565069:-1:exon

position:11564948:-1
position: 11564948
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:11565069:-1
position: 11565069
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:11559429-11559561:-1:exon

position:11559429:-1
position: 11559429
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:11559561:-1
position: 11559561
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:11555810-11555988:-1:exon

position:11555810:-1
position: 11555810
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:11555988:-1
position: 11555988
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:11543217-11543289:-1:exon

position:11543217:-1
position: 11543217
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:11543289:-1
position: 11543289
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:11541642-11541735:-1:exon

position:11541642:-1
position: 11541642
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:11541735:-1
position: 11541735
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:11528317-11528518:-1:exon

position:11528518:-1
position: 11528518
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

trpm4a
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 451745
gene: trpm4a
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transient receptor potential cation channel subfamily M member 4a
translation: MVVDLEKDRDGGGGGKAGSRKEKDQSWIPKIIKKRVCSAFVESSSDSGVCQCGGAQEVHDSVATGDSFGAAIVTQWDSSQHSSEYPTDAFGELEFAGQRRRHSHFLRLSSDTQPHIIYNLMTTHWGLPLPNLVVSVVGGEGQGKIKSWVRDILRKGLVRAAQSTGAWILTGGLREGVSRCVGEAVRDHGAAATALSQKKVIAIGVAPWGLVHNKQQLVNAKGSFPARYYVHNSSHDSNCLDNSYQAFLLVDNGTVGQWGGEKAFRSKLEDYISNQRTGIWGSGSIEIPVLCMLISGDASMLERLDTSLKRATPWLVLAGSGPAADFIGDLLDNFSSQPAEGESAGGFTTEFCDKVREKIRKYFPTETKLERLVESALSIYQNRKLITVFNGEQEGTDDFDTVLLKALVRAGKRGSSKASEYFDELNLAVAWNRVDIAKSELFNGDIQWKYDDLEESMTDALINDKPQFVRLFCENGLNILDYLTYGRLESLYRSLSDSSLAYILLQRRLSERQNVAGSHSSVNGAPAPVNSSQCKLTTPASMKDLSLFEVSRLLSDLLGDICQPFHYGPFGLDHSVSTRRAIKQVNKLLQGECSYRDQYCLTPWAALFIWAVLQNRKEMAIYFWEMAGESVLSALGGCKILRELSKLEIETESKLAMKELAQKFENLANDVFGVCYQSSESRSFTLLIRKSPVWGGATCLQMATAADARLFFSHDGVQSLLSQIWWGDMKRTTDVWKLVLSFFLPPLIYTNLINFRKPEEAVNSLANHPKNIDSDSVEGIDAFSLSDIIPNEEDAEELKALKENVPEPVSLPTTSKSPLIVSRWRQFWFAPVTSFLGNVLMYFLFLCLFAYVLLVDFKPPPPDGPSWIEIVLYIWVFTLVCEEIRQSQTFFVSGLLVQQGMKNYIQDVWNKCDLTAILLFLLGLGCRMFSWSYQFGRAVMAIDYMVFTLRLIHIFAVHKQLGPKIIIVGKMMKDVFFFLFFLGVWLMAYGVANQALLFPYDPRPNWIFRRVLYRPFLHIFGQIPIDEMDCEVDSVLKQMAEIRDHERRLHLLETQLEFCCSALSWMTEALSQSEVVKARRPAPLLKDPAPLSSS
SIO_010081: trpm4a
subclass of: SO_0000673
so part of: trpm4a
location: complement(join(11528493..11528518,11541642..11541735,11543217..11543289,11555810..11555988,11559429..11559561,11564948..11565069,11565801..11566039,11568211..11568257,11568351..11568455,11568634..11568746,11576109..11576254,11577639..11577768,11580978..11581106,11583319..11583420,11591107..11591406,11600167..11600285,11600514..11600616,11605846..11606064,11609495..11609559,11609738..11609915,11610018..11610187,11610295..11610475,11620733..11620910,11625403..11625461,11645123..11645197))
location: region:11528493-11645197:-1
so has part: feature:11645123-11645197:-1:exon
so has part: feature:11625403-11625461:-1:exon
so has part: feature:11620733-11620910:-1:exon
so has part: feature:11610295-11610475:-1:exon
so has part: feature:11610018-11610187:-1:exon
so has part: feature:11609738-11609915:-1:exon
so has part: feature:11609495-11609559:-1:exon
so has part: feature:11605846-11606064:-1:exon
so has part: feature:11600514-11600616:-1:exon
so has part: feature:11600167-11600285:-1:exon
so has part: feature:11591107-11591406:-1:exon
so has part: feature:11583319-11583420:-1:exon
so has part: feature:11580978-11581106:-1:exon
so has part: feature:11577639-11577768:-1:exon
so has part: feature:11576109-11576254:-1:exon
so has part: feature:11568634-11568746:-1:exon
so has part: feature:11568351-11568455:-1:exon
so has part: feature:11568211-11568257:-1:exon
so has part: feature:11565801-11566039:-1:exon
so has part: feature:11564948-11565069:-1:exon
so has part: feature:11559429-11559561:-1:exon
so has part: feature:11555810-11555988:-1:exon
so has part: feature:11543217-11543289:-1:exon
so has part: feature:11541642-11541735:-1:exon
so has part: feature:11528493-11528518:-1:exon

XP_037545243.1
type: Protein
SIO_000068: ncbiprotein

position:11528493:-1
position: 11528493
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:11645197:-1
position: 11645197
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11645123-11645197:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:11625403-11625461:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:11620733-11620910:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:11610295-11610475:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:11610018-11610187:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:11609738-11609915:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:11609495-11609559:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:11605846-11606064:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:11600514-11600616:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:11600167-11600285:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:11591107-11591406:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:11583319-11583420:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:11580978-11581106:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:11577639-11577768:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:11576109-11576254:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:11568634-11568746:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:11568351-11568455:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:11568211-11568257:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:11565801-11566039:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:11564948-11565069:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:11559429-11559561:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:11555810-11555988:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:11543217-11543289:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:11541642-11541735:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:11528493-11528518:-1:exon

zgc:86896
type: Gene
subclass of: SO_0000704
RO_0002162: 451745
gene: zgc:86896
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 12056792..12106000
location: region:12056792-12106000:1
so has part: feature:12056792-12106000:1:exon
subclass of: SO_0000010

119421452
type: Gene
SIO_000068: ncbigene

position:12056792:1
position: 12056792
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:12106000:1
position: 12106000
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:12056792-12106000:1:exon

zgc:86896
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 451745
gene: zgc:86896
product: uncharacterized protein LOC415190 homolog
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 21 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_037688804.1
SIO_010081: zgc:86896
subclass of: SO_0000673
so part of: zgc:86896
location: join(12056792..12056914,12057918..12058048,12065387..12065491,12071821..12072043,12076890..12076997,12077278..12077484,12090755..12090830,12103049..12103239,12103551..12103641,12105716..12106000)
location: region:12056792-12106000:1
so has part: feature:12056792-12056914:1:exon
so has part: feature:12057918-12058048:1:exon
so has part: feature:12065387-12065491:1:exon
so has part: feature:12071821-12072043:1:exon
so has part: feature:12076890-12076997:1:exon
so has part: feature:12077278-12077484:1:exon
so has part: feature:12090755-12090830:1:exon
so has part: feature:12103049-12103239:1:exon
so has part: feature:12103551-12103641:1:exon
so has part: feature:12105716-12106000:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:12056792-12056914:1:exon

position:12056914:1
position: 12056914
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:12057918-12058048:1:exon

position:12057918:1
position: 12057918
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:12058048:1
position: 12058048
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:12065387-12065491:1:exon

position:12065387:1
position: 12065387
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:12065491:1
position: 12065491
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:12071821-12072043:1:exon

position:12071821:1
position: 12071821
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:12072043:1
position: 12072043
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:12076890-12076997:1:exon

position:12076890:1
position: 12076890
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:12076997:1
position: 12076997
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:12077278-12077484:1:exon

position:12077278:1
position: 12077278
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:12077484:1
position: 12077484
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:12090755-12090830:1:exon

position:12090755:1
position: 12090755
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:12090830:1
position: 12090830
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:12103049-12103239:1:exon

position:12103049:1
position: 12103049
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:12103239:1
position: 12103239
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:12103551-12103641:1:exon

position:12103551:1
position: 12103551
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:12103641:1
position: 12103641
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:12105716-12106000:1:exon

position:12105716:1
position: 12105716
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

zgc:86896
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 451745
gene: zgc:86896
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: actin-related protein 2/3 complex subunit 1A-A
translation: MSLYSFGLEPLSCHAWNKDRTQIAVSPNNNVVNIYEKKAKDWVKIHELTEHSGRITGIDWAPESNRIVTCASDRNAYVWTLKDSVWKPTLVLLRINRAATCVKWSPLENKFALGSGARLISVCYFEKENDWWLSKHIKKPICSTVLSLDWHPNNILLAAGSADFHCRVFSAYIKDIEEKPGPTPWGAKMPFGEVMLEHKDCGGWVHSVSFSPNGEQLAWVAHNSSITVADAAQGKEVTQATTDCMPLLSVLFVSQTEIVAAGHDCCPYQFTYKGPGALEFAKKLDIPKQTSKSSMSAMQHFRNLDKKATEEDNNEMDTLHQNSITQLCVVSGGKAKVEMFSSVGLDGAMVIWTFKV
SIO_010081: zgc:86896
subclass of: SO_0000673
so part of: zgc:86896
location: join(12057985..12058048,12065387..12065491,12071821..12072043,12076890..12076997,12077278..12077484,12090755..12090830,12103049..12103239,12103551..12103641,12105716..12105721)
location: region:12057985-12105721:1
so has part: feature:12057985-12058048:1:exon
so has part: feature:12065387-12065491:1:exon
so has part: feature:12071821-12072043:1:exon
so has part: feature:12076890-12076997:1:exon
so has part: feature:12077278-12077484:1:exon
so has part: feature:12090755-12090830:1:exon
so has part: feature:12103049-12103239:1:exon
so has part: feature:12103551-12103641:1:exon
so has part: feature:12105716-12105721:1:exon

XP_037544732.1
type: Protein
SIO_000068: ncbiprotein

position:12057985:1
position: 12057985
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:12105721:1
position: 12105721
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:12057985-12058048:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:12065387-12065491:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:12071821-12072043:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:12076890-12076997:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:12077278-12077484:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:12090755-12090830:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:12103049-12103239:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:12103551-12103641:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:12105716-12105721:1:exon

wipi1
type: Gene
subclass of: SO_0000704
RO_0002162: 451745
gene: wipi1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 12148588..12226976
location: region:12148588-12226976:1
so has part: feature:12148588-12226976:1:exon
subclass of: SO_0000010

119421958
type: Gene
SIO_000068: ncbigene

position:12148588:1
position: 12148588
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:12226976:1
position: 12226976
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:12148588-12226976:1:exon

wipi1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 451745
gene: wipi1
product: WD repeat domain, phosphoinositide interacting 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 7% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_037689316.1
SIO_010081: wipi1
subclass of: SO_0000673
so part of: wipi1
location: join(12148588..12148679,12173505..12173587,12175363..12175532,12199676..12199772,12200019..12200116,12216981..12217073,12217261..12217331,12217688..12217795,12222451..12222463,12223336..12223493,12226308..12226415,12226551..12226684,12226960..12226976)
location: region:12148588-12226976:1
so has part: feature:12148588-12148679:1:exon
so has part: feature:12173505-12173587:1:exon
so has part: feature:12175363-12175532:1:exon
so has part: feature:12199676-12199772:1:exon
so has part: feature:12200019-12200116:1:exon
so has part: feature:12216981-12217073:1:exon
so has part: feature:12217261-12217331:1:exon
so has part: feature:12217688-12217795:1:exon
so has part: feature:12222451-12222463:1:exon
so has part: feature:12223336-12223493:1:exon
so has part: feature:12226308-12226415:1:exon
so has part: feature:12226551-12226684:1:exon
so has part: feature:12226960-12226976:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:12148588-12148679:1:exon

position:12148679:1
position: 12148679
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:12173505-12173587:1:exon

position:12173505:1
position: 12173505
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:12173587:1
position: 12173587
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:12175363-12175532:1:exon

position:12175363:1
position: 12175363
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:12175532:1
position: 12175532
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:12199676-12199772:1:exon

position:12199676:1
position: 12199676
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:12199772:1
position: 12199772
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:12200019-12200116:1:exon

position:12200019:1
position: 12200019
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:12200116:1
position: 12200116
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:12216981-12217073:1:exon

position:12216981:1
position: 12216981
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:12217073:1
position: 12217073
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:12217261-12217331:1:exon

position:12217261:1
position: 12217261
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:12217331:1
position: 12217331
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:12217688-12217795:1:exon

position:12217688:1
position: 12217688
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:12217795:1
position: 12217795
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:12222451-12222463:1:exon

position:12222451:1
position: 12222451
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:12222463:1
position: 12222463
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:12223336-12223493:1:exon

position:12223336:1
position: 12223336
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:12223493:1
position: 12223493
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:12226308-12226415:1:exon

position:12226308:1
position: 12226308
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:12226415:1
position: 12226415
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:12226551-12226684:1:exon

position:12226551:1
position: 12226551
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:12226684:1
position: 12226684
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:12226960-12226976:1:exon

position:12226960:1
position: 12226960
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

wipi1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 451745
gene: wipi1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: WD repeat domain phosphoinositide-interacting protein 1
translation: MEISDGSDTADRVDGPGRRRVSCASFNQDSTSLALGTWSGYKLFSLTTGEKLDCLHDSENTPDVIIVERLFSSSLVVVVSALTPQCMNIYHFKKGKEICNYNYPYKILAVKLNRQRLVVCLEESIYIHNIKDMKLLKTLLNTASNPSGLCALSTELSNSFLAYPGSVTVGEVIVYDANNLSMVTMIPAHESALAALAFNVSTTRLASASERGTVIRVFSIPEGQRLFEFRRGMKRYVNISSLSFSPDGHFLCASSNTETVHVFKLGQLAEGHVPSDDAATWTAYMGKMFSAASSYLPVQVSGMMSQDRAFATAHILSSGLKNVCTLTMIQELLRLLVVTTDGQLFLYNVDPQEGGECTLAFMHRLIGDDDNQRRGPLTDESQVQVQSSPSYAETAALPASGPFTATLTAPTTS
SIO_010081: wipi1
subclass of: SO_0000673
so part of: wipi1
location: join(12148588..12148679,12173505..12173587,12175363..12175532,12199676..12199772,12200019..12200116,12216981..12217073,12217261..12217331,12217688..12217795,12222451..12222463,12223336..12223493,12226308..12226415,12226551..12226684,12226960..12226976)
location: region:12148588-12226976:1
so has part: feature:12148588-12148679:1:exon
so has part: feature:12173505-12173587:1:exon
so has part: feature:12175363-12175532:1:exon
so has part: feature:12199676-12199772:1:exon
so has part: feature:12200019-12200116:1:exon
so has part: feature:12216981-12217073:1:exon
so has part: feature:12217261-12217331:1:exon
so has part: feature:12217688-12217795:1:exon
so has part: feature:12222451-12222463:1:exon
so has part: feature:12223336-12223493:1:exon
so has part: feature:12226308-12226415:1:exon
so has part: feature:12226551-12226684:1:exon
so has part: feature:12226960-12226976:1:exon

XP_037545244.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:12148588-12148679:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:12173505-12173587:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:12175363-12175532:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:12199676-12199772:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:12200019-12200116:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:12216981-12217073:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:12217261-12217331:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:12217688-12217795:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:12222451-12222463:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:12223336-12223493:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:12226308-12226415:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:12226551-12226684:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:12226960-12226976:1:exon

slc16a6b
type: Gene
subclass of: SO_0000704
RO_0002162: 451745
gene: slc16a6b
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 12327654..12334744
location: region:12327654-12334744:1
so has part: feature:12327654-12334744:1:exon
subclass of: SO_0000010

119422037
type: Gene
SIO_000068: ncbigene

position:12327654:1
position: 12327654
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:12334744:1
position: 12334744
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:12327654-12334744:1:exon

slc16a6b
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 451745
gene: slc16a6b
product: solute carrier family 16 member 6b
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 15 Proteins, and 61% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_037689378.1
SIO_010081: slc16a6b
subclass of: SO_0000673
so part of: slc16a6b
location: join(12327654..12327885,12329612..12329755,12331150..12331278,12333224..12334117,12334190..12334744)
location: region:12327654-12334744:1
so has part: feature:12327654-12327885:1:exon
so has part: feature:12329612-12329755:1:exon
so has part: feature:12331150-12331278:1:exon
so has part: feature:12333224-12334117:1:exon
so has part: feature:12334190-12334744:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:12327654-12327885:1:exon

position:12327885:1
position: 12327885
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:12329612-12329755:1:exon

position:12329612:1
position: 12329612
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:12329755:1
position: 12329755
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:12331150-12331278:1:exon

position:12331150:1
position: 12331150
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:12331278:1
position: 12331278
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:12333224-12334117:1:exon

position:12333224:1
position: 12333224
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:12334117:1
position: 12334117
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:12334190-12334744:1:exon

position:12334190:1
position: 12334190
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

slc16a6b
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 451745
gene: slc16a6b
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: solute carrier family 16 member 6b
translation: MKRPGVPRCLGPSVYPEVPEGGWGWAVALAFFLVEVNTYGVIKTLGIFLQDLMEEFRESNSRVSWVISISVFIFAFTAPLATMLSNRFGYRPVVMMGGFLISLGMITSAFTSSITEMYITLGIISGFGFCLSFLPTITILAQYFSRRRALVTSIASSGESFAIFAFAPAFTRLKEDIGWRYCLVVLGVIQASVIGCGVLLRPIVIRPEPLKEDGPSDSASLKQIQNVYEIENEQTRTSMSSAISRGSGDSGVTSLSGSDEDLRNAEPEARSLLGWEKSSSTPPSPIKDCLDVEVTGGEASPVHRSSPKLLDFSVLKDGPFIWYSLFGLFATLGFFAPQLYIIELSKSRGVEPTVASYMLSVMAVAEIFGRLSIGVVLNKVRCKKTLVLLGCVVLLSLVLVAFTVVWEFWGLVVCCALYGFFLGTVASTHIPLLAEEEVVGIQKMPSCVGVYVFIQSFAGLAGPPLGGVLVDVTQDYGAAFYSCAAGLGVSAICLVLVVLGKSTLCQSCIRVQDESKKADKEENVFQDSDQLDFLEVDLVEDSVVPQAEDQKNMSVI
SIO_010081: slc16a6b
subclass of: SO_0000673
so part of: slc16a6b
location: join(12327654..12327885,12329612..12329755,12331150..12331278,12333224..12334117,12334190..12334461)
location: region:12327654-12334461:1
so has part: feature:12327654-12327885:1:exon
so has part: feature:12329612-12329755:1:exon
so has part: feature:12331150-12331278:1:exon
so has part: feature:12333224-12334117:1:exon
so has part: feature:12334190-12334461:1:exon

XP_037545306.1
type: Protein
SIO_000068: ncbiprotein

position:12334461:1
position: 12334461
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:12327654-12327885:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:12329612-12329755:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:12331150-12331278:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:12333224-12334117:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:12334190-12334461:1:exon

gna13b
type: Gene
subclass of: SO_0000704
RO_0002162: 451745
gene: gna13b
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(<12382268..12424073)
location: region:12382268-12424073:-1
so has part: feature:12382268-12424073:-1:exon
subclass of: SO_0000010

119421454
type: Gene
SIO_000068: ncbigene

position:12382268:-1
position: 12382268
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

position:12424073:-1
position: 12424073
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:12382268-12424073:-1:exon

gna13b
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 451745
gene: gna13b
product: guanine nucleotide binding protein (G protein), alpha 13b
inference: similar to RNA sequence (same species):INSD:GELZ01001239.1
exception: annotated by transcript or proteomic data
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: added 81 bases not found in genome assembly; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 97% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_037688806.1
SIO_010081: gna13b
subclass of: SO_0000673
so part of: gna13b
location: complement(join(<12382268..12382318,12392530..12392759,12423776..12424073))
location: region:12382268-12424073:-1
so has part: feature:12423776-12424073:-1:exon
so has part: feature:12392530-12392759:-1:exon
so has part: feature:12382268-12382318:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:12423776-12424073:-1:exon

position:12423776:-1
position: 12423776
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:12392530-12392759:-1:exon

position:12392530:-1
position: 12392530
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:12392759:-1
position: 12392759
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:12382268-12382318:-1:exon

position:12382318:-1
position: 12382318
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

gna13b
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 451745
gene: gna13b
inference: similar to RNA sequence (same species):INSD:GELZ01001239.1
exception: annotated by transcript or proteomic data
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: added 81 bases not found in genome assembly; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: guanine nucleotide-binding protein subunit alpha-13b
translation: MADFLPSSSILSVCFPSCVLTSGEVEQLRKSKEIDKCLRRDKFYVKRLVKILLLGAGESGKSTFLKQMRIIHGQDFDQRTKEEFRATIFSNVIKGIRVLVDAREKLHIPWGDPTNQKHGDKVMGFDTRSAMTHGHGMVETRIFQHYLPSIRALWADQGIQNAYDRRREFQLGESVKYFLDNLGKLGQSDYLPSQQDILLARKPTKGIHEYNFEIK
SIO_010081: gna13b
subclass of: SO_0000673
so part of: gna13b
location: complement(join(<12382268..12382318,12392530..12392759,12423776..12424058))
location: region:12382268-12424058:-1
so has part: feature:12423776-12424058:-1:exon
so has part: feature:12392530-12392759:-1:exon
so has part: feature:12382268-12382318:-1:exon

XP_037544734.1
type: Protein
SIO_000068: ncbiprotein

position:12424058:-1
position: 12424058
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:12423776-12424058:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:12392530-12392759:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:12382268-12382318:-1:exon

LOC119421453
type: Gene
subclass of: SO_0000704
RO_0002162: 451745
gene: LOC119421453
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(12414264..12416121)
location: region:12414264-12416121:-1
so has part: feature:12414264-12416121:-1:exon
subclass of: SO_0000010

119421453
type: Gene
SIO_000068: ncbigene

position:12414264:-1
position: 12414264
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:12416121:-1
position: 12416121
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:12414264-12416121:-1:exon

LOC119421453
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 451745
gene: LOC119421453
product: uncharacterized LOC119421453
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_037688805.1
SIO_010081: LOC119421453
subclass of: SO_0000673
so part of: LOC119421453
location: complement(join(12414264..12414845,12415596..12416121))
location: region:12414264-12416121:-1
so has part: feature:12415596-12416121:-1:exon
so has part: feature:12414264-12414845:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:12415596-12416121:-1:exon

position:12415596:-1
position: 12415596
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:12414264-12414845:-1:exon

position:12414845:-1
position: 12414845
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC119421453
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 451745
gene: LOC119421453
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC119421453
translation: MSSGSTCAVVGCHNSSRKLKDELETYCFAHQQLRKACVCPARYELHSMPRKEDRKRAWLAALKLKYPPKRVYVCSFHFIDKKPTELHPDPELYLGYDRAPPKKRRQLIRTTVSQTASSNIDKTAESVPECTVDSPSVIPDLASVSTQPPGPHLHSVHTQWEDPSLKDHHQYCNTSGRKDVQDKTTQCDEVAFFLLQNDADALLYTGIALETFNTLVSALEGDDNNEFTMPVQDQVLITLMKIKTNRVCSP
SIO_010081: LOC119421453
subclass of: SO_0000673
so part of: LOC119421453
location: complement(join(12414478..12414845,12415596..12415980))
location: region:12414478-12415980:-1
so has part: feature:12415596-12415980:-1:exon
so has part: feature:12414478-12414845:-1:exon

XP_037544733.1
type: Protein
SIO_000068: ncbiprotein

position:12414478:-1
position: 12414478
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:12415980:-1
position: 12415980
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:12415596-12415980:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:12414478-12414845:-1:exon

LOC119421959
type: Gene
subclass of: SO_0000704
RO_0002162: 451745
gene: LOC119421959
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 12475347..12581818
location: region:12475347-12581818:1
so has part: feature:12475347-12581818:1:exon
subclass of: SO_0000010

119421959
type: Gene
SIO_000068: ncbigene

position:12475347:1
position: 12475347
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:12581818:1
position: 12581818
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:12475347-12581818:1:exon

LOC119421959
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 451745
gene: LOC119421959
product: regulator of G-protein signaling 9-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 54% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_037689317.1
SIO_010081: LOC119421959
subclass of: SO_0000673
so part of: LOC119421959
location: join(12475347..12475489,12475597..12475609,12480610..12480789,12541005..12541117,12541441..12541457,12553134..12553240,12569384..12569435,12577914..12577972,12579681..12579757,12581634..12581715,12581813..12581818)
location: region:12475347-12581818:1
so has part: feature:12475347-12475489:1:exon
so has part: feature:12475597-12475609:1:exon
so has part: feature:12480610-12480789:1:exon
so has part: feature:12541005-12541117:1:exon
so has part: feature:12541441-12541457:1:exon
so has part: feature:12553134-12553240:1:exon
so has part: feature:12569384-12569435:1:exon
so has part: feature:12577914-12577972:1:exon
so has part: feature:12579681-12579757:1:exon
so has part: feature:12581634-12581715:1:exon
so has part: feature:12581813-12581818:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:12475347-12475489:1:exon

position:12475489:1
position: 12475489
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:12475597-12475609:1:exon

position:12475597:1
position: 12475597
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:12475609:1
position: 12475609
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:12480610-12480789:1:exon

position:12480610:1
position: 12480610
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:12480789:1
position: 12480789
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:12541005-12541117:1:exon

position:12541005:1
position: 12541005
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:12541117:1
position: 12541117
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:12541441-12541457:1:exon

position:12541441:1
position: 12541441
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:12541457:1
position: 12541457
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:12553134-12553240:1:exon

position:12553134:1
position: 12553134
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:12553240:1
position: 12553240
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:12569384-12569435:1:exon

position:12569384:1
position: 12569384
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:12569435:1
position: 12569435
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:12577914-12577972:1:exon

position:12577914:1
position: 12577914
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:12577972:1
position: 12577972
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:12579681-12579757:1:exon

position:12579681:1
position: 12579681
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:12579757:1
position: 12579757
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:12581634-12581715:1:exon

position:12581634:1
position: 12581634
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:12581715:1
position: 12581715
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:12581813-12581818:1:exon

position:12581813:1
position: 12581813
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC119421959
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 451745
gene: LOC119421959
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: regulator of G-protein signaling 9-like
translation: MEPFIDLELSVDLEPSVDLELSVGLELSGDLEFSVDLERSGDSADEGSSSDCECVALSDCTHLSSATTAICEIPQSFIFTSFGLHPAADMTIRTARPNRGQHFRSRLHCLRKLEAIVVEMQDPRGGVKGSVQKLNVTTIPHAVVGETNSNSELQQEAQVFSTMLVAFGFIYPLQNHKKLVMCNDSSLYRFQTPYFWPTQKWVPEDSDYAIYLAKRNIRKKGMLEPYEQAHYSHLHDWLNHKWDFIVMQATEQYKAGRDRNKPDRVVFDCQERAYWIVNRPPF
SIO_010081: LOC119421959
subclass of: SO_0000673
so part of: LOC119421959
location: join(12475347..12475489,12475597..12475609,12480610..12480789,12541005..12541117,12541441..12541457,12553134..12553240,12569384..12569435,12577914..12577972,12579681..12579757,12581634..12581715,12581813..12581818)
location: region:12475347-12581818:1
so has part: feature:12475347-12475489:1:exon
so has part: feature:12475597-12475609:1:exon
so has part: feature:12480610-12480789:1:exon
so has part: feature:12541005-12541117:1:exon
so has part: feature:12541441-12541457:1:exon
so has part: feature:12553134-12553240:1:exon
so has part: feature:12569384-12569435:1:exon
so has part: feature:12577914-12577972:1:exon
so has part: feature:12579681-12579757:1:exon
so has part: feature:12581634-12581715:1:exon
so has part: feature:12581813-12581818:1:exon

XP_037545245.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:12475347-12475489:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:12475597-12475609:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:12480610-12480789:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:12541005-12541117:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:12541441-12541457:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:12553134-12553240:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:12569384-12569435:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:12577914-12577972:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:12579681-12579757:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:12581634-12581715:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:12581813-12581818:1:exon

LOC119421455
type: Gene
subclass of: SO_0000704
RO_0002162: 451745
gene: LOC119421455
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 12626782..12637768
location: region:12626782-12637768:1
so has part: feature:12626782-12637768:1:exon
subclass of: SO_0000010

119421455
type: Gene
SIO_000068: ncbigene

position:12626782:1
position: 12626782
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:12637768:1
position: 12637768
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:12626782-12637768:1:exon

LOC119421455
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 451745
gene: LOC119421455
product: regulator of G-protein signaling 9
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_037688807.1
SIO_010081: LOC119421455
subclass of: SO_0000673
so part of: LOC119421455
location: join(12626782..12626813,12627841..12627979,12633694..12633776,12637479..12637768)
location: region:12626782-12637768:1
so has part: feature:12626782-12626813:1:exon
so has part: feature:12627841-12627979:1:exon
so has part: feature:12633694-12633776:1:exon
so has part: feature:12637479-12637768:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:12626782-12626813:1:exon

position:12626813:1
position: 12626813
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:12627841-12627979:1:exon

position:12627841:1
position: 12627841
reference: sequence
type: ForwardStrandPosition
type: ExactPosition