Legionella geestiana strain 1308 plasmid unnamed, complete sequence.
type: Entry
definition: Legionella geestiana strain 1308 plasmid unnamed, complete sequence.
sequence version: NZ_CP038272.1
sequence date: 2023-04-28
sequence: sequence
division: CON
label: NZ_CP038272.1
type: RefSeq
SIO_000068: refseq
dblink: PRJNA224116
dblink: SAMN11265776
keyword: RefSeq
source: Legionella geestiana
organism: Legionella geestiana
taxonomy: Bacteria; Pseudomonadota; Gammaproteobacteria; Legionellales; Legionellaceae; Legionella.
reference: 1
reference: 2
comment: REFSEQ INFORMATION: The reference sequence is identical to\nCP038272.1.\nThe annotation was added by the NCBI Prokaryotic Genome Annotation\nPipeline (PGAP). Information about PGAP can be found here:\nhttps://www.ncbi.nlm.nih.gov/genome/annotation_prok/\n\n##Genome-Assembly-Data-START##\nAssembly Date :: 17-OCT-2018\nAssembly Method :: Unicycler v. 2018-10-17\nGenome Representation :: Full\nExpected Final Version :: Yes\nGenome Coverage :: 220.0x\nSequencing Technology :: Illumina HiSeq; PacBio RS\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI RefSeq\nAnnotation Date :: 04/28/2023 03:07:20\nAnnotation Pipeline :: NCBI Prokaryotic Genome\n Annotation Pipeline (PGAP)\nAnnotation Method :: Best-placed reference protein\n set; GeneMarkS-2+\nAnnotation Software revision :: 6.5\nFeatures Annotated :: Gene; CDS; rRNA; tRNA; ncRNA\nGenes (total) :: 2,394\nCDSs (total) :: 2,340\nGenes (coding) :: 2,306\nCDSs (with protein) :: 2,306\nGenes (RNA) :: 54\nrRNAs :: 3, 3, 3 (5S, 16S, 23S)\ncomplete rRNAs :: 3, 3, 3 (5S, 16S, 23S)\ntRNAs :: 41\nncRNAs :: 4\nPseudo Genes (total) :: 34\nCDSs (without protein) :: 34\nPseudo Genes (ambiguous residues) :: 0 of 34\nPseudo Genes (frameshifted) :: 5 of 34\nPseudo Genes (incomplete) :: 30 of 34\nPseudo Genes (internal stop) :: 2 of 34\nPseudo Genes (multiple problems) :: 3 of 34\n##Genome-Annotation-Data-END##\nCOMPLETENESS: full length.

sequence
subclass of: SO_0000155
sequence length: 60873
topology: circular
so has quality: SO_0000988
location: 1..60873
location: region:1-60873:1
RO_0002162: 45065

NZ_CP038272
type: RefSeq
SIO_000068: refseq

PRJNA224116
type: BioProject
SIO_000068: bioproject

SAMN11265776
type: BioSample
SIO_000068: biosample

1
title: Diverse conjugative elements silence natural transformation in Legionella species
author: Durieux, I.
author: Ginevra, C.
author: Attaiech, L.
author: Picq, K.
author: Juan, P.A.
author: Jarraud, S.
author: Charpentier, X.
journal: Unpublished

2
title: Direct Submission
author: Durieux, I.
author: Ginevra, C.
author: Attaiech, L.
author: Picq, K.
author: Juan, P.A.
author: Jarraud, S.
author: Charpentier, X.
journal: Submitted (27-MAR-2019) Bacteriology, Hospices Civils de Lyon, 103 grande rue de la Croix Rousse, Lyon 69004, France

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:60873:1
position: 60873
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-60873:1:source
so part of: sequence
organism: Legionella geestiana
mol type: genomic DNA
strain: 1308
isolation source: Hot water tap, Geest Office Building
culture collection: ATCC:49504
type material: type strain of Legionella geestiana
plasmid: unnamed
country: United Kingdom: London, England
collection date: 1993

45065
type: Taxonomy
SIO_000068: taxonomy

E4T54_RS11635
type: Gene
subclass of: SO_0000704
RO_0002162: 45065
locus tag: E4T54_RS11635
old locus tag: E4T54_11635
so part of: sequence
location: join(60614..60873,1..1612)
location: region:1-60873:1
so has part: feature:60614-60873:1:exon
so has part: feature:1-1612:1:exon
subclass of: SO_0000010

urn:…
SIO_000300: 1
SIO_000628: feature:60614-60873:1:exon

position:60614:1
position: 60614
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1-1612:1:exon

position:1612:1
position: 1612
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

E4T54_RS11635
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 45065
locus tag: E4T54_RS11635
old locus tag: E4T54_11635
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012535880.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: cation-translocating P-type ATPase
translation: MPKLWHNPKVITAAIAGILLTIGFVGSYLTLPRIIANGFYIGAVLIGGYYFAREAIEEFFKEHEIGIEFLMSTAAIVAGVMGQWAESATLVFLYSISEAAEGYAGERARHAIRVLMELAPKSALVRRNNSEFLIPLEDIQIGDEFIVRPGESIATDGEVISGHSSVNQAPITGESIPVEKFVGNKVFSATINGEGTLTIRATKKFAENTLSRIIFLVEKAQDKKGRSQRFIERFGNLYSPFVLLAGVLIATLPPLFGLHWQEWVLRATVFIVAAAPCALVISIPITLVAALGTASRNGILLKGGIYLEKLVQIKVIALDKTGTLTQGQPKVTDIISLNNYTQNQILNVAATLESRSQHPLAHAILQQAKAESVAYKPVEHFKSLTGSGVQGFINGEQFYIGNPKLFIDMGLLVETVIQEINKLQTVGKTVVLVGTDKEILGLIAITDPLRSTARQMVSSLKLMGIERVVMLTGDNSITAASIGVQAGVDEVFSDLSPEDKTRKIEELERRYGKVMMVGDGVNDAPALAAAHVGVAMGAAGTDVALETADVALMGDNLLKLPYLIEFSHRTWNIILQNLGLSIIVISSLIVGAVTGYFTLPIAVLAHEISELIVIASGLRMLKS
SIO_010081: E4T54_RS11635
subclass of: SO_0000673
so part of: E4T54_RS11635
location: join(60614..60873,1..1612)
location: region:1-60873:1
so has part: feature:60614-60873:1:exon
so has part: feature:1-1612:1:exon

WP_231294691.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:60614-60873:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1-1612:1:exon

E4T54_RS11640
type: Gene
subclass of: SO_0000704
RO_0002162: 45065
locus tag: E4T54_RS11640
old locus tag: E4T54_11640
so part of: sequence
location: complement(1628..2023)
location: region:1628-2023:-1
so has part: feature:1628-2023:-1:exon
subclass of: SO_0000010

position:1628:-1
position: 1628
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2023:-1
position: 2023
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1628-2023:-1:exon

E4T54_RS11640
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 45065
locus tag: E4T54_RS11640
old locus tag: E4T54_11640
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015961495.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF302 domain-containing protein
translation: MINIKYGFGKEVLYSFDDAIKKVTEELQKEGFGVLTNIDVSATLKKKLNKDMPPYQILGACNPQFAHHALEKEPSIGLLLPCNVVVRQDDIGKVHIEFMDPKSVLELVGNPEINLVAGEVRQKLERVLSAL
SIO_010081: E4T54_RS11640
subclass of: SO_0000673
so part of: E4T54_RS11640
location: complement(1628..2023)
location: region:1628-2023:-1
so has part: feature:1628-2023:-1:exon

WP_012187539.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1628-2023:-1:exon

E4T54_RS11645
type: Gene
subclass of: SO_0000704
RO_0002162: 45065
locus tag: E4T54_RS11645
old locus tag: E4T54_11645
so part of: sequence
location: complement(2123..2671)
location: region:2123-2671:-1
so has part: feature:2123-2671:-1:exon
subclass of: SO_0000010

position:2123:-1
position: 2123
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2671:-1
position: 2671
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2123-2671:-1:exon

E4T54_RS11645
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 45065
locus tag: E4T54_RS11645
old locus tag: E4T54_11645
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012187538.1
GO function: GO:0003677 - DNA binding [Evidence IEA]; GO:0000150 - DNA strand exchange activity [Evidence IEA]
GO process: GO:0006310 - DNA recombination [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: recombinase family protein
translation: MKIGYARVSTTDQNLELQLVALKEAGCKRIYQEKISGAKRDRPELQRLLDQLRPEDVVVVWKLDRLARSTQHLLELIDCIRTTEASFCSLSEPWADTTSHAGKMIMTVFAGIAEFERDLIRERTGAGRAAAKQRGVRFGRPEKMNKEQKSLAKRLLQEDKSVSEIAKTFNVHKATIYRLQQE
SIO_010081: E4T54_RS11645
subclass of: SO_0000673
so part of: E4T54_RS11645
location: complement(2123..2671)
location: region:2123-2671:-1
so has part: feature:2123-2671:-1:exon

WP_012187538.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2123-2671:-1:exon

E4T54_RS11650
type: Gene
subclass of: SO_0000704
RO_0002162: 45065
locus tag: E4T54_RS11650
old locus tag: E4T54_11650
pseudo: true
so part of: sequence
location: 2828..>5788
location: region:2828-5788:1
so has part: feature:2828-5788:1:exon
subclass of: SO_0000010

position:2828:1
position: 2828
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5788:1
position: 5788
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2828-5788:1:exon

E4T54_RS11650
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 45065
locus tag: E4T54_RS11650
old locus tag: E4T54_11650
inference: COORDINATES: similar to AA sequence:RefSeq:WP_007509002.1
GO function: GO:0004803 - transposase activity [Evidence IEA]
GO process: GO:0006313 - transposition, DNA-mediated [Evidence IEA]
note: incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: Tn3 family transposase
SIO_010081: E4T54_RS11650
subclass of: SO_0000673
so part of: E4T54_RS11650
location: 2828..>5788
location: region:2828-5788:1
so has part: feature:2828-5788:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2828-5788:1:exon

E4T54_RS11655
type: Gene
subclass of: SO_0000704
RO_0002162: 45065
locus tag: E4T54_RS11655
old locus tag: E4T54_11655
pseudo: true
so part of: sequence
location: complement(<5893..6897)
location: region:5893-6897:-1
so has part: feature:5893-6897:-1:exon
subclass of: SO_0000010

position:5893:-1
position: 5893
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

position:6897:-1
position: 6897
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5893-6897:-1:exon

E4T54_RS11655
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 45065
locus tag: E4T54_RS11655
old locus tag: E4T54_11655
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011212682.1
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: IS4 family transposase
SIO_010081: E4T54_RS11655
subclass of: SO_0000673
so part of: E4T54_RS11655
location: complement(<5893..6897)
location: region:5893-6897:-1
so has part: feature:5893-6897:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5893-6897:-1:exon

E4T54_RS11660
type: Gene
subclass of: SO_0000704
RO_0002162: 45065
locus tag: E4T54_RS11660
old locus tag: E4T54_11660
so part of: sequence
location: complement(7344..9119)
location: region:7344-9119:-1
so has part: feature:7344-9119:-1:exon
subclass of: SO_0000010

position:7344:-1
position: 7344
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9119:-1
position: 9119
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7344-9119:-1:exon

E4T54_RS11660
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 45065
locus tag: E4T54_RS11660
old locus tag: E4T54_11660
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MFEIFLKTVGSIVDAATYGFRETPTSQLLPKAHELTYPPEVPFDPRQPRFVLKEWVHRERSRKISSFRDQLRQIKRNDVSTDASSLVELFKEITQLLNDDKGPPFKLEQSQAIAELLNSINTLFRDKEDARHRASNVAHISSIMPINASVTPLHTDLGTNSNTTPSLSEGSDAIQIHHIEDIPNNTPPPPPPPPPPPPPPSAPVLVTREIKSPMALLQERKLEFVKHNAVVMKTLQEPYTMELLNELLFNTRLLYRSIAAISAKKAPKQATSMADALSGGMNRLKKSASSKDVASSSSSSSSVVPMTAKERELQALKDSLYGQCADLCVKITKAKIAMKEQDIQLLLQSRQQKVDERMGLERRIAGIENQLREPGYQAYKALISNLTRNAERLEEALSELTAYEQQKQYLADAIETEHRGKPAMKLSEKIVVDKEVFSALVQDNHKEINTCTENIHALKIVINQYRLTLNTSYPQGHSYHDYQALESEVAVLKGSKESVVDSITLNRRQVDAAKSTISSLQSENIRYSRGDLGSDPVSIAGEAKPDQSQGFQIKMEDLANSPLRSNVTFFKGTSARSLLRTCSDSQLTLRK
SIO_010081: E4T54_RS11660
subclass of: SO_0000673
so part of: E4T54_RS11660
location: complement(7344..9119)
location: region:7344-9119:-1
so has part: feature:7344-9119:-1:exon

WP_028386908.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:7344-9119:-1:exon

E4T54_RS11665
type: Gene
subclass of: SO_0000704
RO_0002162: 45065
locus tag: E4T54_RS11665
old locus tag: E4T54_11665
so part of: sequence
location: 9421..10428
location: region:9421-10428:1
so has part: feature:9421-10428:1:exon
subclass of: SO_0000010

position:9421:1
position: 9421
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:10428:1
position: 10428
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9421-10428:1:exon

E4T54_RS11665
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 45065
locus tag: E4T54_RS11665
old locus tag: E4T54_11665
inference: COORDINATES: protein motif:HMM:NF033591.1
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: IS4 family transposase
translation: MLVSLFKVRTVNLSELACGFESEATIESRYKRIKRFFREFTICFTALAGWVMTFFDFDQTPLYLSIDRTNWQWGKQDINILMLSIAYKGIAIPLMWDLLPKRGNSNTTERIALLKRFIEQFGKERVACLLADREFVGNEWFSWLRSEGISFCIRIKSNTQTSNSLGLDVNVDALFYDLKPGEQRKLRGERRLWKQKVWLSALRLTDGELLIVATDKEVDSPIELYGRRWEIETLFSCLKSRGFNFEDTHITKPERISKLIALLSIGFCWAYKVGEWRNEQKAIKMKKHGRKEVSIFRYGLDFLRDAALNAKQNILSLIGQVMAFLSIEAPTEALI
SIO_010081: E4T54_RS11665
subclass of: SO_0000673
so part of: E4T54_RS11665
location: 9421..10428
location: region:9421-10428:1
so has part: feature:9421-10428:1:exon

WP_278043240.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:9421-10428:1:exon

E4T54_RS11670
type: Gene
subclass of: SO_0000704
RO_0002162: 45065
locus tag: E4T54_RS11670
old locus tag: E4T54_11670
pseudo: true
so part of: sequence
location: <10450..10749
location: region:10450-10749:1
so has part: feature:10450-10749:1:exon
subclass of: SO_0000010

position:10450:1
position: 10450
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

position:10749:1
position: 10749
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:10450-10749:1:exon

E4T54_RS11670
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 45065
locus tag: E4T54_RS11670
old locus tag: E4T54_11670
inference: COORDINATES: similar to AA sequence:RefSeq:WP_003089110.1
GO function: GO:0004803 - transposase activity [Evidence IEA]
GO process: GO:0006313 - transposition, DNA-mediated [Evidence IEA]
note: incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: Tn3 family transposase
SIO_010081: E4T54_RS11670
subclass of: SO_0000673
so part of: E4T54_RS11670
location: <10450..10749
location: region:10450-10749:1
so has part: feature:10450-10749:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:10450-10749:1:exon

E4T54_RS11675
type: Gene
subclass of: SO_0000704
RO_0002162: 45065
locus tag: E4T54_RS11675
old locus tag: E4T54_11675
so part of: sequence
location: complement(10831..11400)
location: region:10831-11400:-1
so has part: feature:10831-11400:-1:exon
subclass of: SO_0000010

position:10831:-1
position: 10831
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:11400:-1
position: 11400
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:10831-11400:-1:exon

E4T54_RS11675
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 45065
locus tag: E4T54_RS11675
old locus tag: E4T54_11675
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MYRLNYYSIALIGVYILAFIIMQYGGGNNWTEGLFSLPVIAFIVFWSEKMTGHLKHQKNRQSLMAFGRDVFIINYSVVFSFVASLIFQRNNVDARGWWPVLIIMSEFYAILFGLVFAVLALLLKTQHDKYTERFAQALAISFISLTFLPFYFNLGPTDHIHTSTIWMILLFSVHLFACLVSRLRKKPSS
SIO_010081: E4T54_RS11675
subclass of: SO_0000673
so part of: E4T54_RS11675
location: complement(10831..11400)
location: region:10831-11400:-1
so has part: feature:10831-11400:-1:exon

WP_051550946.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:10831-11400:-1:exon

E4T54_RS11680
type: Gene
subclass of: SO_0000704
RO_0002162: 45065
locus tag: E4T54_RS11680
old locus tag: E4T54_11680
so part of: sequence
location: complement(11490..14285)
location: region:11490-14285:-1
so has part: feature:11490-14285:-1:exon
subclass of: SO_0000010

position:11490:-1
position: 11490
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:14285:-1
position: 14285
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11490-14285:-1:exon

E4T54_RS11680
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 45065
locus tag: E4T54_RS11680
old locus tag: E4T54_11680
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017169491.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: zincin-like metallopeptidase domain-containing protein
translation: MNKKPFHDIVAEKLIAQLKQGTAPWQKPWKPGQPGAFIPMNPITGKRYKGINAIQLMAEGHSDSRWMTYKQAETLGAQVRRGEKGTMIQYWKFAEEKIKTDDHGNPVLNQEGKPVKEEVRLERPRVFYAVVFNAGQIDGLPPRVQEEVSWSAIERAEQMLKNSGAVIHFGEHDRAFYRPASDTIHLPDKSQFPEASNYYATALHELGHWTGHSSRLDRDLIHPFGSEGYAREELRAEIASMLLGDELGIGHDPGQHASYVGSWIKSLQDDPLEVFRAAADAEKIHQFVLSLEQQQVLEQKRTEAVTKDYSQVLSADVNTVLHGSDFVFDSVSQYQGETLEKALRHHGFNSISDITGVHPEQFESTALTALSPVFGLSSEDNLMSNVETEAHIERTCLALAFMYVAEELVMKQNLSESKSIPANLADDIAALNGIQSLQNTGIEAAPVSAEKIWLDIPFKQKDVAKELAGTLPDGQKAIAWDKENSRWFARPGADLDRLKPWLSNSSGLPDMESNQKNLVIERTRLAVPYEQREAVKQLGGKLADGKNAVIWDKAEKCWFAEIGANLDKIKPWISEGNMRHQTPAMPPQQEFADTLKSLGCVVTDDHPIMDGKAHRIRVEGDKKGEKAGFYVGHLDGHPAGYAKNNRTGMEITWKSKGYSFTPEEKARLQADAFEKIKAREIAHKESQEEAALRVERKIDELLPVVSPTPYLTAKGIKPKAGIFTDKERLTTFIPATDANGKLWSMQFISNNGTKRFAKNSRKEGCFHALGGLDAIECAPAIVIAEGYATAASVSEALGFATIAAFDAGNLESVARNLHEKFPDKPIIITGDDDRLLEVRQGINPGLIKAQEAARAVNGTAIFPIFAPGEQVQDPKGFTDFNDLATKSSLGAEAVRRQVKSIVDDAVRKHDKTMDAPKQAIPLKRAGRAMSC
SIO_010081: E4T54_RS11680
subclass of: SO_0000673
so part of: E4T54_RS11680
location: complement(11490..14285)
location: region:11490-14285:-1
so has part: feature:11490-14285:-1:exon

WP_028386702.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:11490-14285:-1:exon

E4T54_RS11685
type: Gene
subclass of: SO_0000704
RO_0002162: 45065
locus tag: E4T54_RS11685
old locus tag: E4T54_11685
so part of: sequence
location: complement(14320..14553)
location: region:14320-14553:-1
so has part: feature:14320-14553:-1:exon
subclass of: SO_0000010

position:14320:-1
position: 14320
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:14553:-1
position: 14553
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:14320-14553:-1:exon

E4T54_RS11685
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 45065
locus tag: E4T54_RS11685
old locus tag: E4T54_11685
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012806755.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MATTRHPALPDIHDELIAFQEKLIDALIPGFQAEFSPDEAIKAGACLEDALSEEEALSSAPDLLDAISEDREPGPMY
SIO_010081: E4T54_RS11685
subclass of: SO_0000673
so part of: E4T54_RS11685
location: complement(14320..14553)
location: region:14320-14553:-1
so has part: feature:14320-14553:-1:exon

WP_028386703.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:14320-14553:-1:exon

E4T54_RS11690
type: Gene
subclass of: SO_0000704
RO_0002162: 45065
locus tag: E4T54_RS11690
old locus tag: E4T54_11690
so part of: sequence
location: complement(14588..16624)
location: region:14588-16624:-1
so has part: feature:14588-16624:-1:exon
subclass of: SO_0000010

position:14588:-1
position: 14588
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:16624:-1
position: 16624
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:14588-16624:-1:exon

E4T54_RS11690
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 45065
locus tag: E4T54_RS11690
old locus tag: E4T54_11690
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011114056.1
GO function: GO:0003677 - DNA binding [Evidence IEA]; GO:0003916 - DNA topoisomerase activity [Evidence IEA]
GO process: GO:0006265 - DNA topological change [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DNA topoisomerase 3
translation: MRLFIAEKPSVAKAIAEELGVTGKGEGYLECGQDKITWCFGHMLECAEPDEYTADDAPRNPATGKKLWRVEDLPIIPEVWKVLPKEDAKKQLKTIARLLKEASTIVNAGDSDREGQLLIDEVLDHFENTKPVLRFWVSAHDAVSLQRGLASLKSNDGFKGLGLAALGRARADWLIGMNLSRAYTLRAARGGSRALLTVGRVQTPTLALVVARDKDIESFKSQPYYTIKAAIQYKNHAFVANWRASDAQRGLDSENRLVDTAVANALIETLNGAPGHIVTYKQEPKTRIQPRAYSLSDITLLASSKYGFSAAEVLDACQALYETHKLTSYPRTDCAYLPESQHADAPDILEALSDINPEMQELIAHADTRIKSKTWDDAKVGVHHGIIPTRHRGNVARLSNTERAIYELIVRAYIAQFYPVHEFLSTTVEMDIKGETFETRGNTVIKNGWRDVYTERDEESENEAADSQTLPMMQAQDAVICLKATRQDLKTKPAPRFTEGTLQRAMENIHKFITEPEHKKMLKEGDGIGTSATRASIISELKRRNYLEVRGKQIISTTLGRSVIGALPEVIKNPVLTAIYERMLRDIEKNPQTLDGFIERQVAFVTEQVARANNGVVTITGAKASAVVSDNYRCTECQKGLVRRPGRKGFWWSCSSYPECRQTWPDIKGKPDYNRNKV
SIO_010081: E4T54_RS11690
subclass of: SO_0000673
so part of: E4T54_RS11690
location: complement(14588..16624)
location: region:14588-16624:-1
so has part: feature:14588-16624:-1:exon

WP_028386704.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:14588-16624:-1:exon

E4T54_RS11695
type: Gene
subclass of: SO_0000704
RO_0002162: 45065
gene: traF
locus tag: E4T54_RS11695
old locus tag: E4T54_11695
so part of: sequence
location: complement(16628..17188)
location: region:16628-17188:-1
so has part: feature:16628-17188:-1:exon
subclass of: SO_0000010

position:16628:-1
position: 16628
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:17188:-1
position: 17188
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:16628-17188:-1:exon

E4T54_RS11695
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 45065
gene: traF
locus tag: E4T54_RS11695
old locus tag: E4T54_11695
inference: COORDINATES: similar to AA sequence:RefSeq:WP_020405853.1
GO component: GO:0030288 - outer membrane-bounded periplasmic space [Evidence IEA]
GO function: GO:0008233 - peptidase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: conjugative transfer signal peptidase TraF
translation: MKGFAKRMQTAGAVLCLFLTALGATLFLAGARINTSNSIPIGLYWKTARPVALGDYVIFCPPQNNLFREARARRYLDAGFCPGGFGPLMKQVAAIPGDSVSISEDGVKVNGKRRAYSRPMSMDLEGRPLPQPRITRKLKASELLLMTDQNPVSFDARYFGPVNQFQVEAVIKPVLTRALHQHLTGY
SIO_010081: E4T54_RS11695
subclass of: SO_0000673
so part of: E4T54_RS11695
location: complement(16628..17188)
location: region:16628-17188:-1
so has part: feature:16628-17188:-1:exon

WP_028386705.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:16628-17188:-1:exon

E4T54_RS11700
type: Gene
subclass of: SO_0000704
RO_0002162: 45065
locus tag: E4T54_RS11700
old locus tag: E4T54_11700
so part of: sequence
location: complement(17185..19116)
location: region:17185-19116:-1
so has part: feature:17185-19116:-1:exon
subclass of: SO_0000010

position:17185:-1
position: 17185
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:19116:-1
position: 19116
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:17185-19116:-1:exon

E4T54_RS11700
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 45065
locus tag: E4T54_RS11700
old locus tag: E4T54_11700
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017172170.1
GO component: GO:0016020 - membrane [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: type IV secretory system conjugative DNA transfer family protein
translation: MNDKQSKAIGPQVRKKNLRKDKLVPLLAIASLISGLWAATQYLAHAFSYHASLGMSAGKFYLPWSIFAWWHAWYELYPASFNAAASIGTMTAAGGLIASVLIKMIMSNTSKASEFLHGSARWANKQDIQEAGLLGNNEGVYVGAWEDSNGTLHYLRHNGPEHVLTYAPTRSGKGVGLVVPTLLSWPHSAVITDLKGELWAMTAGWRKHHAKNLVIRFEPATLNGSACWNPLDEIRIATENEVGDVQNLATLIVDPDGKGLESHWQKTAQALLVGLILHALYKHREEGIAATLPQIDNMLADPDNNIADLLTEMTQYKHVNGANHPVVGAAARDMIDRPEEEAGSILSTVKSYLSLYRDPVVAKNVSHSDFCIKDLMHHEKPVSLYIVTQPNDKARLQPLVRVMINLIVRLLADKMEFERVPTDIPRYRRFLSRFGFEQTPRTYVRTKKIYKHRLLGMIDEFPSLGKLSILQESLAFVAGYGIKFYLICQDINQLKSREMGYGPDETVTSNCHIQNAYPPNRVETADHLSKLTGLSTIVKEQISTSGKRASMLLSQVSRTMQEVQRPLLTPDECLRMPGPKKDARGYIKEAGDMVVYVAGFPAIYGRQPLYFQDPVFTARAAVPEPMESDRLRPKSVAGKEIVL
SIO_010081: E4T54_RS11700
subclass of: SO_0000673
so part of: E4T54_RS11700
location: complement(17185..19116)
location: region:17185-19116:-1
so has part: feature:17185-19116:-1:exon

WP_028386706.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:17185-19116:-1:exon

E4T54_RS11705
type: Gene
subclass of: SO_0000704
RO_0002162: 45065
locus tag: E4T54_RS11705
old locus tag: E4T54_11705
so part of: sequence
location: complement(19125..19718)
location: region:19125-19718:-1
so has part: feature:19125-19718:-1:exon
subclass of: SO_0000010

position:19125:-1
position: 19125
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:19718:-1
position: 19718
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:19125-19718:-1:exon

E4T54_RS11705
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 45065
locus tag: E4T54_RS11705
old locus tag: E4T54_11705
inference: COORDINATES: similar to AA sequence:RefSeq:WP_004086719.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: transglycosylase SLT domain-containing protein
translation: MPYIDIPEPLQERVVCSIMAAIKYEVPANIVLAVAEKEGGKPGLWSENQNGTFDVGPMQFNTVYLSDLKKYGITAEDVAESGCYSYDLAAWRLRGHLQHDQGTLWVRAANYHSRTPKYNEVYREDLVKKAQKWGSWLETRFTTYSVTTPGVAPVRASLVAKNTREIPKAPSKPRTRHYKNAKEALMAVYGPAKTELM
SIO_010081: E4T54_RS11705
subclass of: SO_0000673
so part of: E4T54_RS11705
location: complement(19125..19718)
location: region:19125-19718:-1
so has part: feature:19125-19718:-1:exon

WP_028386707.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:19125-19718:-1:exon

E4T54_RS11710
type: Gene
subclass of: SO_0000704
RO_0002162: 45065
gene: trbL
locus tag: E4T54_RS11710
old locus tag: E4T54_11710
so part of: sequence
location: complement(19725..21137)
location: region:19725-21137:-1
so has part: feature:19725-21137:-1:exon
subclass of: SO_0000010

position:19725:-1
position: 19725
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:21137:-1
position: 21137
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:19725-21137:-1:exon

E4T54_RS11710
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 45065
gene: trbL
locus tag: E4T54_RS11710
old locus tag: E4T54_11710
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010655140.1
GO process: GO:0009291 - unidirectional conjugation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: P-type conjugative transfer protein TrbL
translation: MKRLSFNPVLVLVLLLLSAEACAATGIDNANVLDNILERFANTASLWSAKMVSYGTWLFWGLTLLSMVWTYGLMAMRKADIQEFLAETIRFFSVTGFFLWILQNGPAIAMAIINSMRQVASEASGLSRLVSPSSIVDIGFDIAAKVADTSSIWSPASSIVGLIIAAVILVVLALVGVNMLLMLVSAWLLAYGGVFLLGFGGGRWTQDIAINYYKTVLGIAMQTFTMILIVGIGKSFIDQYYAAMGGDMAIKELFVMLVVSIILLVLVNKLPPMIAGIVGGGGSGGGVGGLGMGAALGATGMAAGMAAGAASAALGAGASTAGGASALKAAFTAAQQSMAVGSGGGGSSGGGLVGAVESAGRFATAMGTSLAQGAADVAKEKMSAMKEAASARIADTMGGQIASKINEANEINSGAGANTSSDASNDNSLQPVFGSDSLGPARASGGQGTPPVNDEVAAFASKSSFSDARS
SIO_010081: E4T54_RS11710
subclass of: SO_0000673
so part of: E4T54_RS11710
location: complement(19725..21137)
location: region:19725-21137:-1
so has part: feature:19725-21137:-1:exon

WP_028386708.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:19725-21137:-1:exon

E4T54_RS11715
type: Gene
subclass of: SO_0000704
RO_0002162: 45065
gene: trbK
locus tag: E4T54_RS11715
old locus tag: E4T54_11715
so part of: sequence
location: complement(21143..21334)
location: region:21143-21334:-1
so has part: feature:21143-21334:-1:exon
subclass of: SO_0000010

position:21143:-1
position: 21143
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:21334:-1
position: 21334
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:21143-21334:-1:exon

E4T54_RS11715
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 45065
gene: trbK
locus tag: E4T54_RS11715
old locus tag: E4T54_11715
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015445017.1
GO component: GO:0005886 - plasma membrane [Evidence IEA]
GO process: GO:0009292 - horizontal gene transfer [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: entry exclusion lipoprotein TrbK
translation: MKTALILCLILTGALAGCDSSKPSGRPLTCADSPQGRSKAEQMEIGEACFRGGSFKKSSNREW
SIO_010081: E4T54_RS11715
subclass of: SO_0000673
so part of: E4T54_RS11715
location: complement(21143..21334)
location: region:21143-21334:-1
so has part: feature:21143-21334:-1:exon

WP_028386709.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:21143-21334:-1:exon

E4T54_RS11720
type: Gene
subclass of: SO_0000704
RO_0002162: 45065
gene: trbJ
locus tag: E4T54_RS11720
old locus tag: E4T54_11720
so part of: sequence
location: complement(21363..22109)
location: region:21363-22109:-1
so has part: feature:21363-22109:-1:exon
subclass of: SO_0000010

position:21363:-1
position: 21363
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:22109:-1
position: 22109
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:21363-22109:-1:exon

E4T54_RS11720
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 45065
gene: trbJ
locus tag: E4T54_RS11720
old locus tag: E4T54_11720
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015445018.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: P-type conjugative transfer protein TrbJ
translation: MILKKTKICQFVFALLSGLAVIGPAYPTMPVLDWSNLLESIQQTRQQIAQTKTQLGQYETMLKNAKSLDAFHWDQARATMDNLVSSIDTLSYYKQQAGSLDAYLSQYQNTDYYRASPCFNGNCTQEERQALRNREARASEAQKRANDAMLRGIEQQQASLKADAIRLETLQKQAEGKGAEGQLSAIQAANQLASAETHQLIQIRGLMVAEQNAAATRAAAIANKEAIQAAGDERFRSGSFKKSQTKTW
SIO_010081: E4T54_RS11720
subclass of: SO_0000673
so part of: E4T54_RS11720
location: complement(21363..22109)
location: region:21363-22109:-1
so has part: feature:21363-22109:-1:exon

WP_028386710.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:21363-22109:-1:exon

E4T54_RS11725
type: Gene
subclass of: SO_0000704
RO_0002162: 45065
locus tag: E4T54_RS11725
old locus tag: E4T54_11725
so part of: sequence
location: complement(22106..23446)
location: region:22106-23446:-1
so has part: feature:22106-23446:-1:exon
subclass of: SO_0000010

position:22106:-1
position: 22106
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:23446:-1
position: 23446
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:22106-23446:-1:exon

E4T54_RS11725
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 45065
locus tag: E4T54_RS11725
old locus tag: E4T54_11725
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011114050.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: TrbI/VirB10 family protein
translation: MTGPLDNMSPESSPGDMKKTGVKRVNNLPLFIALGAFALFVAIIAMVAVKRSESQNEPPVPQKVSRDKNTDTSSMAADIVAGHASGIIPSSLPPVVTETSMAIPVAMIDNPDAPPMPARLQASMAPENPDIERIRQEKTQQFEEAVRAKTHIELPSQMSASHANASPLTGNETEARLAEVRRQLAEMRRDDTTARYQARLQQIRAAMSGGSNMASESKSTFSGGSENSARWALNASIEAPRTPFELRAGAVIPGVMISGVKSSLPGQVIGQVSQNVYDTATGRFLLIPQGTRLVGVYSSDVSYGQDTVMIAWQRLVFPDGKALDMGSMPGADSAGFAGFHDKVNNHYFRTFASATLMSGVVAGVTYSQSRNQASNAFGPPTAGSVMSEALGQQLGQVTAQMIAKNLDIAPTLEIRPGFRFNVTVVKDLTFNKPYQSFDYYRQGDKT
SIO_010081: E4T54_RS11725
subclass of: SO_0000673
so part of: E4T54_RS11725
location: complement(22106..23446)
location: region:22106-23446:-1
so has part: feature:22106-23446:-1:exon

WP_028386711.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:22106-23446:-1:exon

E4T54_RS11730
type: Gene
subclass of: SO_0000704
RO_0002162: 45065
locus tag: E4T54_RS11730
old locus tag: E4T54_11730
so part of: sequence
location: complement(23452..23883)
location: region:23452-23883:-1
so has part: feature:23452-23883:-1:exon
subclass of: SO_0000010

position:23452:-1
position: 23452
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:23883:-1
position: 23883
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:23452-23883:-1:exon

E4T54_RS11730
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 45065
locus tag: E4T54_RS11730
old locus tag: E4T54_11730
inference: COORDINATES: protein motif:HMM:NF018934.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MFKWLITLLFIIQLQGCATTQYGHYATLTPTVNQAMAKDTLTRLTVLYPPARTSFTIRQSVKDPYGTALVAALRGRGYSVYELTGKVPRTQKAHEGIELAYIADAPYGNLHRVTLFIGTRIISRAYVVKDGVLKPLGYWLLKE
SIO_010081: E4T54_RS11730
subclass of: SO_0000673
so part of: E4T54_RS11730
location: complement(23452..23883)
location: region:23452-23883:-1
so has part: feature:23452-23883:-1:exon

WP_028386712.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:23452-23883:-1:exon

E4T54_RS11735
type: Gene
subclass of: SO_0000704
RO_0002162: 45065
gene: trbG
locus tag: E4T54_RS11735
old locus tag: E4T54_11735
so part of: sequence
location: complement(23883..24758)
location: region:23883-24758:-1
so has part: feature:23883-24758:-1:exon
subclass of: SO_0000010

position:24758:-1
position: 24758
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:23883-24758:-1:exon

E4T54_RS11735
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 45065
gene: trbG
locus tag: E4T54_RS11735
old locus tag: E4T54_11735
inference: COORDINATES: similar to AA sequence:RefSeq:WP_000753228.1
GO process: GO:0009291 - unidirectional conjugation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: P-type conjugative transfer protein TrbG
translation: MNKTMLSLFLFMPALALADGDMADQYFSKKNLSLTPQERTAISIGKKWQTGQATSKPVAARDGSIRFVYGSGQTQILCAVLQVCDVALQPGEQVNNLNVGDPRFEVEPAITGVGPLQRLHLLIKALDVGLDTSLVVTTDRRTYHFRLRSSRHEFMPYVSFTYPEEAQAKWDAIRREEARERHDNTIPLTGEYLGNLSFNYMLQGSARWKPCRVFNDGVKTIIEMPRAMQQSEAPTLLVLRPGGLFKKSETVMVNYRVQGARYIVDTIFDRAILISGVGRRQERITIIRGRA
SIO_010081: E4T54_RS11735
subclass of: SO_0000673
so part of: E4T54_RS11735
location: complement(23883..24758)
location: region:23883-24758:-1
so has part: feature:23883-24758:-1:exon

WP_028386713.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:23883-24758:-1:exon

E4T54_RS11740
type: Gene
subclass of: SO_0000704
RO_0002162: 45065
locus tag: E4T54_RS11740
old locus tag: E4T54_11740
so part of: sequence
location: complement(24775..25512)
location: region:24775-25512:-1
so has part: feature:24775-25512:-1:exon
subclass of: SO_0000010

position:24775:-1
position: 24775
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:25512:-1
position: 25512
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:24775-25512:-1:exon

E4T54_RS11740
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 45065
locus tag: E4T54_RS11740
old locus tag: E4T54_11740
inference: COORDINATES: similar to AA sequence:RefSeq:WP_020851112.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: conjugal transfer protein TrbF
translation: MKLKVKQLFSKKTPAPKEALKTPEQTNPYLNARRSWNGHVTGLMSAVQIWQFIGLVGLLTGLASVGGMISIGSQSKFIPLVFREDAGGNTISVTRADRVPEAQIDDYRTAALRFIENIRLVTADSDLQRKAVFQTYAYLAANDPATVKANEFLGVNKESNPFNRAANEIVSIEIHSVLQQTKESWQVDWMETVRSRDGALKEKPYLMRAIVNLYQNELDTEASNVEALRNPHFIFVRDFNWSRLL
SIO_010081: E4T54_RS11740
subclass of: SO_0000673
so part of: E4T54_RS11740
location: complement(24775..25512)
location: region:24775-25512:-1
so has part: feature:24775-25512:-1:exon

WP_028386714.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:24775-25512:-1:exon

E4T54_RS11745
type: Gene
subclass of: SO_0000704
RO_0002162: 45065
locus tag: E4T54_RS11745
old locus tag: E4T54_11745
so part of: sequence
location: complement(25509..28046)
location: region:25509-28046:-1
so has part: feature:25509-28046:-1:exon
subclass of: SO_0000010

position:25509:-1
position: 25509
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:28046:-1
position: 28046
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:25509-28046:-1:exon

E4T54_RS11745
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 45065
locus tag: E4T54_RS11745
old locus tag: E4T54_11745
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006869966.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: VirB4 family type IV secretion/conjugal transfer ATPase
translation: MIESLTVMIAAFGIILLVILFVRVRAIGADSHLKKHRAKDAGLADLLNYAAVVDDGVIVGKNGSFMAAWLYQGDDHISSTESQVELVSFRINQALSNLGSGWMIHVDAVRRAAPSYSDKSRSHFCDPVSRAIDEERRRLFENMGTLYEGFFVLTLTWFPPLLTERKFVELMFDDDASKPSKKARTRQLIDIFKRECQSIESRLSAAVKLERLGAMKMVHENGSQKTCDNFLRWLQFCVTGLNHPVMLPETPVYLDALIGGQELFTGITPKIGRKFIQCVAIEGFPLESYPGILTSLGELTIEYRWSSRFIFMDNFEAVAHLEKYRKKWKQKVRGFFDQVFNTSSGVVDEDAVSMVADAAAAIAETNSGMVGQGYYTSVIVLMDEDRALVESSARFIEKAILALGFVARIETINTMDAFLGTLPGHGVENVRRPLLNTMNLADLLPTSTVWTGQNEAPNPNLPPFSPPLMHCVTHGNSPFRLNLHVRDLGHTIMFGPTRAGKSTHLGLIALQWRRYPSARIYAFDKGLSMYPACKAVGGDHYIIANANEKLAFAPLQFLDTQNDRAWAMEWIDTVLALNNVFTTPAQRNEIGNAIMSMHKNGDKTLSAFSITVQDESIREALKQYTVDGLMGHLLDALEDGFGLSDFMTFEIEALMNLGEKFALPVLLHLFRRIEESLDGRPTLIILDEAWLMLAHPVFCSKIQSWLDSMAKKNCTVLMATQHLSHAINSGIFDVIVESTATKIFLPNVNARDKSTAEGYVRMGLNEKQIDILAMAVPKRDYYYVSEKGQRLYSLALGPLALAFVGHTDKDSLAIIQALEARHGRDWVHEWLRTLGLSLNHYGEAA
SIO_010081: E4T54_RS11745
subclass of: SO_0000673
so part of: E4T54_RS11745
location: complement(25509..28046)
location: region:25509-28046:-1
so has part: feature:25509-28046:-1:exon

WP_028386715.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:25509-28046:-1:exon

E4T54_RS11750
type: Gene
subclass of: SO_0000704
RO_0002162: 45065
locus tag: E4T54_RS11750
old locus tag: E4T54_11750
so part of: sequence
location: complement(28043..28354)
location: region:28043-28354:-1
so has part: feature:28043-28354:-1:exon
subclass of: SO_0000010

position:28043:-1
position: 28043
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:28354:-1
position: 28354
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:28043-28354:-1:exon

E4T54_RS11750
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 45065
locus tag: E4T54_RS11750
old locus tag: E4T54_11750
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010676131.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: conjugal transfer protein TrbD
translation: MMTRRIPIRRAGNRHSLFMGGDRELVMFSGLIAAILVFAAQDWIAIFAGVGLWFSALWALRRMAKADPEMRAVYLRQRRYNAYYPARSTPFRINTKSQGAQYK
SIO_010081: E4T54_RS11750
subclass of: SO_0000673
so part of: E4T54_RS11750
location: complement(28043..28354)
location: region:28043-28354:-1
so has part: feature:28043-28354:-1:exon

WP_028386716.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:28043-28354:-1:exon

E4T54_RS11755
type: Gene
subclass of: SO_0000704
RO_0002162: 45065
locus tag: E4T54_RS11755
old locus tag: E4T54_11755
so part of: sequence
location: complement(28348..28719)
location: region:28348-28719:-1
so has part: feature:28348-28719:-1:exon
subclass of: SO_0000010

position:28348:-1
position: 28348
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:28719:-1
position: 28719
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:28348-28719:-1:exon

E4T54_RS11755
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 45065
locus tag: E4T54_RS11755
old locus tag: E4T54_11755
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010894509.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: TrbC/VirB2 family protein
translation: MTRFYLDRKILGLIGLTLLFMLLTEPALAAKAGGNLPFDTWLDKVRSSITGPFAFTAAIIGLVGAGAMLIFGGDMNGFLRTLIFVVLVMSFLVAAQNTLKAITGQGAEVSALASYIQTGESAS
SIO_010081: E4T54_RS11755
subclass of: SO_0000673
so part of: E4T54_RS11755
location: complement(28348..28719)
location: region:28348-28719:-1
so has part: feature:28348-28719:-1:exon

WP_035902686.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:28348-28719:-1:exon

E4T54_RS11760
type: Gene
subclass of: SO_0000704
RO_0002162: 45065
gene: trbB
locus tag: E4T54_RS11760
old locus tag: E4T54_11760
so part of: sequence
location: complement(28739..29701)
location: region:28739-29701:-1
so has part: feature:28739-29701:-1:exon
subclass of: SO_0000010

position:28739:-1
position: 28739
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:29701:-1
position: 29701
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:28739-29701:-1:exon

E4T54_RS11760
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 45065
gene: trbB
locus tag: E4T54_RS11760
old locus tag: E4T54_11760
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015445026.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: P-type conjugative transfer ATPase TrbB
translation: MSPHEEESTSVKARAKEKLRRDLGFVIEAALADPKTVEVMLNADGKLWQERLGEKMQYIGNMSASRAEAVIKTIAGFHGKEITRFKPTLEGELPLDGSRFAGQLPPVVSAPTFAIRKKALSIFTLSQYVDAGIMTTAQCDTIKAAIAAHRNILVIGGTGSGKTTLVNAIINEMVVFDPTERIFIIEDAGEIQCAAENSVQYHTTLDVSMTMLLKTTLRMRPDRILVGEVRGPEALDLLDAWNTGHEGGAATLHANNTLAGLTRLKSLITRNPAAPSDIDALIGEAVHLVVHIARTPEGRRVQEILEVSGFYDGEFITQKL
SIO_010081: E4T54_RS11760
subclass of: SO_0000673
so part of: E4T54_RS11760
location: complement(28739..29701)
location: region:28739-29701:-1
so has part: feature:28739-29701:-1:exon

WP_028386718.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:28739-29701:-1:exon

E4T54_RS11765
type: Gene
subclass of: SO_0000704
RO_0002162: 45065
locus tag: E4T54_RS11765
old locus tag: E4T54_11765
so part of: sequence
location: complement(29731..29832)
location: region:29731-29832:-1
so has part: feature:29731-29832:-1:exon
subclass of: SO_0000010

position:29731:-1
position: 29731
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:29832:-1
position: 29832
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:29731-29832:-1:exon

E4T54_RS11765
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 45065
locus tag: E4T54_RS11765
old locus tag: E4T54_11765
inference: COORDINATES: protein motif:HMM:NF014638.2
GO function: GO:0003723 - RNA binding [Evidence IEA]
GO process: GO:0006402 - mRNA catabolic process [Evidence IEA]; GO:0006109 - regulation of carbohydrate metabolic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: carbon storage regulator
translation: MDGKADVGISAPKSIPVHRLEIFEKNKTQKNKD
SIO_010081: E4T54_RS11765
subclass of: SO_0000673
so part of: E4T54_RS11765
location: complement(29731..29832)
location: region:29731-29832:-1
so has part: feature:29731-29832:-1:exon

WP_244924880.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:29731-29832:-1:exon

E4T54_RS12050
type: Gene
subclass of: SO_0000704
RO_0002162: 45065
locus tag: E4T54_RS12050
so part of: sequence
location: complement(29838..29987)
location: region:29838-29987:-1
so has part: feature:29838-29987:-1:exon
subclass of: SO_0000010

position:29838:-1
position: 29838
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:29987:-1
position: 29987
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:29838-29987:-1:exon

E4T54_RS12050
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 45065
locus tag: E4T54_RS12050
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MKGARTPAAAAMAALLTACAATQAVITLGKLESGVRMSQSIFLEPVSLF
SIO_010081: E4T54_RS12050
subclass of: SO_0000673
so part of: E4T54_RS12050
location: complement(29838..29987)
location: region:29838-29987:-1
so has part: feature:29838-29987:-1:exon

WP_155832462.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:29838-29987:-1:exon

E4T54_RS11770
type: Gene
subclass of: SO_0000704
RO_0002162: 45065
gene: csrA
locus tag: E4T54_RS11770
old locus tag: E4T54_11770
so part of: sequence
location: complement(29987..30232)
location: region:29987-30232:-1
so has part: feature:29987-30232:-1:exon
subclass of: SO_0000010

position:30232:-1
position: 30232
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:29987-30232:-1:exon

E4T54_RS11770
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 45065
gene: csrA
locus tag: E4T54_RS11770
old locus tag: E4T54_11770
inference: COORDINATES: similar to AA sequence:RefSeq:WP_007806189.1
GO function: GO:0003723 - RNA binding [Evidence IEA]
GO process: GO:0006402 - mRNA catabolic process [Evidence IEA]; GO:0006109 - regulation of carbohydrate metabolic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: carbon storage regulator CsrA
translation: MLVLSRKTGQTIMIGDDIYLTVLGVKGNQIRLGIDAPEEVAVHREEIYMRIKQNAEPKAPVSVTYRRAMPKIDACRMVGAA
SIO_010081: E4T54_RS11770
subclass of: SO_0000673
so part of: E4T54_RS11770
location: complement(29987..30232)
location: region:29987-30232:-1
so has part: feature:29987-30232:-1:exon

WP_081776769.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:29987-30232:-1:exon

E4T54_RS11775
type: Gene
subclass of: SO_0000704
RO_0002162: 45065
locus tag: E4T54_RS11775
old locus tag: E4T54_11775
so part of: sequence
location: complement(30232..30414)
location: region:30232-30414:-1
so has part: feature:30232-30414:-1:exon
subclass of: SO_0000010

position:30414:-1
position: 30414
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:30232-30414:-1:exon

E4T54_RS11775
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 45065
locus tag: E4T54_RS11775
old locus tag: E4T54_11775
inference: COORDINATES: protein motif:HMM:NF014638.2
GO function: GO:0003723 - RNA binding [Evidence IEA]
GO process: GO:0006402 - mRNA catabolic process [Evidence IEA]; GO:0006109 - regulation of carbohydrate metabolic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: carbon storage regulator
translation: MQVVTRRLSEKLVIEPNLVIAILGVHWNIVRLGIHSENPVVIRDFNPKDYVFSCNEKGRG
SIO_010081: E4T54_RS11775
subclass of: SO_0000673
so part of: E4T54_RS11775
location: complement(30232..30414)
location: region:30232-30414:-1
so has part: feature:30232-30414:-1:exon

WP_135100421.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:30232-30414:-1:exon

E4T54_RS11780
type: Gene
subclass of: SO_0000704
RO_0002162: 45065
locus tag: E4T54_RS11780
old locus tag: E4T54_11780
pseudo: true
so part of: sequence
location: 30678..>31682
location: region:30678-31682:1
so has part: feature:30678-31682:1:exon
subclass of: SO_0000010

position:30678:1
position: 30678
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:31682:1
position: 31682
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:30678-31682:1:exon

E4T54_RS11780
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 45065
locus tag: E4T54_RS11780
old locus tag: E4T54_11780
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011212682.1
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: IS4 family transposase
SIO_010081: E4T54_RS11780
subclass of: SO_0000673
so part of: E4T54_RS11780
location: 30678..>31682
location: region:30678-31682:1
so has part: feature:30678-31682:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:30678-31682:1:exon

E4T54_RS11785
type: Gene
subclass of: SO_0000704
RO_0002162: 45065
locus tag: E4T54_RS11785
old locus tag: E4T54_11785
so part of: sequence
location: 31760..32587
location: region:31760-32587:1
so has part: feature:31760-32587:1:exon
subclass of: SO_0000010

position:31760:1
position: 31760
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:32587:1
position: 32587
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:31760-32587:1:exon

E4T54_RS11785
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 45065
locus tag: E4T54_RS11785
old locus tag: E4T54_11785
inference: COORDINATES: protein motif:HMM:NF013395.2
GO function: GO:0016787 - hydrolase activity [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0003676 - nucleic acid binding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DNA/RNA non-specific endonuclease
translation: MIFCPVQRVFCQRFAVALLLIPVIVFGKTANTCTLKEAPCFHQCCPQGAAASNDVVNNVLYVVSSNRETKFADWVAYTVSADNLDGSGTKRNWKKDPSIPDGYTLKPADYHHASHNDYDRGHLAPLAHFSNHEAWEKTNYLSNVTPQIASLNRGLWLDLENTERKLVKYYRYPLVHVVTGTWYDKDTMPSLPSCKLAHRVPNGYWKVIVVEDGNGKIGVAAFQIKQHELSQSFCDTRITLSALNKRTKLSVLPDTPPSKIDRSMSSRLLADMDCT
SIO_010081: E4T54_RS11785
subclass of: SO_0000673
so part of: E4T54_RS11785
location: 31760..32587
location: region:31760-32587:1
so has part: feature:31760-32587:1:exon

WP_115152897.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:31760-32587:1:exon

E4T54_RS11790
type: Gene
subclass of: SO_0000704
RO_0002162: 45065
locus tag: E4T54_RS11790
old locus tag: E4T54_11790
so part of: sequence
location: complement(32609..32902)
location: region:32609-32902:-1
so has part: feature:32609-32902:-1:exon
subclass of: SO_0000010

position:32609:-1
position: 32609
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:32902:-1
position: 32902
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:32609-32902:-1:exon

E4T54_RS11790
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 45065
locus tag: E4T54_RS11790
old locus tag: E4T54_11790
inference: COORDINATES: similar to AA sequence:RefSeq:WP_002556002.1
GO function: GO:0003677 - DNA binding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: helix-turn-helix transcriptional regulator
translation: MMENHVTTGSVFDDLGFTEAEAENLKIRAALMRAIEKYIDDRRLTQKAAAQLMRVTQPRISDLKRGKIERFTIDMLVNMLACTHASIALVVNDRIAA
SIO_010081: E4T54_RS11790
subclass of: SO_0000673
so part of: E4T54_RS11790
location: complement(32609..32902)
location: region:32609-32902:-1
so has part: feature:32609-32902:-1:exon

WP_028386785.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:32609-32902:-1:exon

E4T54_RS11795
type: Gene
subclass of: SO_0000704
RO_0002162: 45065
locus tag: E4T54_RS11795
old locus tag: E4T54_11795
so part of: sequence
location: complement(32917..33228)
location: region:32917-33228:-1
so has part: feature:32917-33228:-1:exon
subclass of: SO_0000010

position:32917:-1
position: 32917
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:33228:-1
position: 33228
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:32917-33228:-1:exon

E4T54_RS11795
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 45065
locus tag: E4T54_RS11795
old locus tag: E4T54_11795
inference: COORDINATES: similar to AA sequence:RefSeq:WP_004091353.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: type II toxin-antitoxin system RelE/ParE family toxin
translation: MKKIIWLGNSHGDLLAFPEDARKIAGYNLDKVQRGEEPTDWKPMPSIGMGVKEIRIHCANEYRVIYLAQRDEGVYVLHSFVKKTQKTSIRDLELAKKRFSQIK
SIO_010081: E4T54_RS11795
subclass of: SO_0000673
so part of: E4T54_RS11795
location: complement(32917..33228)
location: region:32917-33228:-1
so has part: feature:32917-33228:-1:exon

WP_028386784.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:32917-33228:-1:exon

E4T54_RS11800
type: Gene
subclass of: SO_0000704
RO_0002162: 45065
locus tag: E4T54_RS11800
old locus tag: E4T54_11800
so part of: sequence
location: complement(33292..33948)
location: region:33292-33948:-1
so has part: feature:33292-33948:-1:exon
subclass of: SO_0000010

position:33292:-1
position: 33292
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:33948:-1
position: 33948
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:33292-33948:-1:exon

E4T54_RS11800
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 45065
locus tag: E4T54_RS11800
old locus tag: E4T54_11800
inference: COORDINATES: protein motif:HMM:NF012422.2
GO function: GO:0003677 - DNA binding [Evidence IEA]
GO process: GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: helix-turn-helix transcriptional regulator
translation: MVSKEKILTAFAPMRRFGVERFVLHLSFADGRDLVFTSDGAFCATLAAVGHGVLEEDLQHEGVCLERFHPECRFTFSAVTISLVREFETLCIELMDNLAPLIVEAFEEYRYLFVMADKQLRDAVIRGGYEKEILVTGRARDCLWHAGHGKSAKETAKLLSISPSTVENHLKNIREKFDRKPCSVIFIECLHRGIFGGVGIRVKKETVDTRNTGSIFSQ
SIO_010081: E4T54_RS11800
subclass of: SO_0000673
so part of: E4T54_RS11800
location: complement(33292..33948)
location: region:33292-33948:-1
so has part: feature:33292-33948:-1:exon

WP_035902784.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:33292-33948:-1:exon

E4T54_RS11805
type: Gene
subclass of: SO_0000704
RO_0002162: 45065
locus tag: E4T54_RS11805
old locus tag: E4T54_11805
so part of: sequence
location: complement(33977..34174)
location: region:33977-34174:-1
so has part: feature:33977-34174:-1:exon
subclass of: SO_0000010

position:33977:-1
position: 33977
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:34174:-1
position: 34174
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:33977-34174:-1:exon

E4T54_RS11805
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 45065
locus tag: E4T54_RS11805
old locus tag: E4T54_11805
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MTIAQLHVVSIEELLSVLMDCSEKLFLASQESNNIDWWRVSQRAERAKEYLSFVLHQKNGIQLLH
SIO_010081: E4T54_RS11805
subclass of: SO_0000673
so part of: E4T54_RS11805
location: complement(33977..34174)
location: region:33977-34174:-1
so has part: feature:33977-34174:-1:exon

WP_028386783.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:33977-34174:-1:exon

E4T54_RS11810
type: Gene
subclass of: SO_0000704
RO_0002162: 45065
locus tag: E4T54_RS11810
old locus tag: E4T54_11810
so part of: sequence
location: complement(34171..34683)
location: region:34171-34683:-1
so has part: feature:34171-34683:-1:exon
subclass of: SO_0000010

position:34171:-1
position: 34171
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:34683:-1
position: 34683
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:34171-34683:-1:exon

E4T54_RS11810
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 45065
locus tag: E4T54_RS11810
old locus tag: E4T54_11810
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MYGQLFTNRHGLSDNGTWFEILGDLTPKAIDSGVKRLYATRENGKFCDFPPNPLQFRALCLAWYEEIDLPSAGAAFNEIQRHASCAHQMGWSHPVVRYIAAKLPADFMRIDDVQRAWKMFVPLYETACNLMRQGHVLPKVDVSPVHVHSRRREIARQHLNEIKKILGSAS
SIO_010081: E4T54_RS11810
subclass of: SO_0000673
so part of: E4T54_RS11810
location: complement(34171..34683)
location: region:34171-34683:-1
so has part: feature:34171-34683:-1:exon

WP_131793754.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:34171-34683:-1:exon

E4T54_RS11815
type: Gene
subclass of: SO_0000704
RO_0002162: 45065
locus tag: E4T54_RS11815
old locus tag: E4T54_11815
so part of: sequence
location: complement(34625..35617)
location: region:34625-35617:-1
so has part: feature:34625-35617:-1:exon
subclass of: SO_0000010

position:34625:-1
position: 34625
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:35617:-1
position: 35617
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:34625-35617:-1:exon

E4T54_RS11815
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 45065
locus tag: E4T54_RS11815
old locus tag: E4T54_11815
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: Vir protein
translation: MCTNDFRNRQQYVFSKLFCGLPHSQVVLIFYLLSLADKCTGIVEGITYADLQQLLFIKPAPGRKESGMPTKQSIRNFIKSIERECPKDFKVVTEGQKLRFIFPTMPGIFEVYAQADVDSELNTVHDIPESIASTGDEGCFGNEQNTEVNTLPDIPESVKKNNIYTNNSTNCGMKKPIDPHFKPSREVLDIAKGRGYLRAEEPDEIAAFIRYNQMHQTVWADFNAVYLLWLENGSRYSQQQETRRKISTENSRSSNHGNGRKKTSGNIVELVAFHNQGAEHPGEEVPFNCPTIVCENDQSQSFEMALAEIDECVWATFHESTRPVGQRYLV
SIO_010081: E4T54_RS11815
subclass of: SO_0000673
so part of: E4T54_RS11815
location: complement(34625..35617)
location: region:34625-35617:-1
so has part: feature:34625-35617:-1:exon

WP_131793755.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:34625-35617:-1:exon

E4T54_RS11820
type: Gene
subclass of: SO_0000704
RO_0002162: 45065
locus tag: E4T54_RS11820
old locus tag: E4T54_11820
so part of: sequence
location: 35750..36415
location: region:35750-36415:1
so has part: feature:35750-36415:1:exon
subclass of: SO_0000010

position:35750:1
position: 35750
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:36415:1
position: 36415
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:35750-36415:1:exon

E4T54_RS11820
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 45065
locus tag: E4T54_RS11820
old locus tag: E4T54_11820
inference: COORDINATES: protein motif:HMM:NF012920.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: helix-turn-helix domain-containing protein
translation: MSIATVLPLLLQKYNLNALELERMTGVPSSTIYRLLKGSAANPTVEVLKKISSFFQITISQLIGEEPMGCKQIPLIQPNKIWEFIAHPMKFYSDLKKVPVDFPLGNNCFATIAMDNLMEPFILINSMVIVDPDREICNKDFVLLISNEASLPKIRQTIFDGDDCYIRVLNSNCNIDIEKISFDDYVFCGSIVHYRTNLFDMDLYKFMADKDLHEEKMVLKK
SIO_010081: E4T54_RS11820
subclass of: SO_0000673
so part of: E4T54_RS11820
location: 35750..36415
location: region:35750-36415:1
so has part: feature:35750-36415:1:exon

WP_051550959.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:35750-36415:1:exon

E4T54_RS11825
type: Gene
subclass of: SO_0000704
RO_0002162: 45065
locus tag: E4T54_RS11825
old locus tag: E4T54_11825
so part of: sequence
location: 36412..37164
location: region:36412-37164:1
so has part: feature:36412-37164:1:exon
subclass of: SO_0000010

position:36412:1
position: 36412
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:37164:1
position: 37164
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:36412-37164:1:exon

E4T54_RS11825
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 45065
locus tag: E4T54_RS11825
old locus tag: E4T54_11825
inference: COORDINATES: protein motif:HMM:NF014631.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: VUT family protein
translation: MNINFLKNKLKFISRKSEIDRDSLLIFIGMLYTTIFFSSFILGYKGVQIGGGILCASVFIFPLLFPINDSISELISPRASYFLIIFIIICEFLFSLVTYCIAMLPSPTHWDNQSIYPILTSGFIHIAIADSISLAIGFFANTYIFSKWGLKIFGTGFFRRSLGATAVGELLFTISTNFITFHGLGNAGLLDTLNIIGSDYAFKMLYSLLICIPNAYFVQRIKKLKYAEHTKQTQNTNVFALKLTEPSYRE
SIO_010081: E4T54_RS11825
subclass of: SO_0000673
so part of: E4T54_RS11825
location: 36412..37164
location: region:36412-37164:1
so has part: feature:36412-37164:1:exon

WP_028386780.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:36412-37164:1:exon

E4T54_RS11830
type: Gene
subclass of: SO_0000704
RO_0002162: 45065
locus tag: E4T54_RS11830
old locus tag: E4T54_11830
so part of: sequence
location: complement(37133..37666)
location: region:37133-37666:-1
so has part: feature:37133-37666:-1:exon
subclass of: SO_0000010

position:37133:-1
position: 37133
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:37666:-1
position: 37666
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:37133-37666:-1:exon

E4T54_RS11830
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 45065
locus tag: E4T54_RS11830
old locus tag: E4T54_11830
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MLILKKILEIIKRKNDFAFSIVDEVLDEESRHVSFNVRLEGKCLSPVQKNAIDLLKIARDKTIFSDDDYDKILMAVIDNQRKITEKKYQSQYSLINHRFSEQLEAPLVVYMDDKNKLHIKLAKEVYSNIEILRKFKAEDSACIGSIVGYHDAEQEFKMRNSVKRNNVITLDRRVRSI
SIO_010081: E4T54_RS11830
subclass of: SO_0000673
so part of: E4T54_RS11830
location: complement(37133..37666)
location: region:37133-37666:-1
so has part: feature:37133-37666:-1:exon

WP_028386779.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:37133-37666:-1:exon

E4T54_RS11835
type: Gene
subclass of: SO_0000704
RO_0002162: 45065
locus tag: E4T54_RS11835
old locus tag: E4T54_11835
so part of: sequence
location: 37755..38594
location: region:37755-38594:1
so has part: feature:37755-38594:1:exon
subclass of: SO_0000010

position:37755:1
position: 37755
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:38594:1
position: 38594
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:37755-38594:1:exon

E4T54_RS11835
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 45065
locus tag: E4T54_RS11835
old locus tag: E4T54_11835
inference: COORDINATES: protein motif:HMM:NF024880.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: class I SAM-dependent methyltransferase
translation: MPKHIYNDPKYYSENNALQYNFAMRMLRHLSFQKDSRVLDIGCGDGLITSEVARIVSDGCVIGTDISQKMVEHAATQYCSIPNIRFIQMDASQNIFREQFDIITSFNCLHWVSDQHSALLGIAKAAVEGAQIALLLSHKKSLYHEVLDALCSSDEWSLYFKDQKSARQFFSADFYRELLVESGLDIISLNEEEMIYHFESKESVAAFFAAAGSQPTLLPSSKRSRFISEFSDAYTKNVKTRQDGAIPIAFWCLQIVARKPSLLPSVRPERETQAFFAKL
SIO_010081: E4T54_RS11835
subclass of: SO_0000673
so part of: E4T54_RS11835
location: 37755..38594
location: region:37755-38594:1
so has part: feature:37755-38594:1:exon

WP_081776777.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:37755-38594:1:exon

E4T54_RS11840
type: Gene
subclass of: SO_0000704
RO_0002162: 45065
locus tag: E4T54_RS11840
old locus tag: E4T54_11840
so part of: sequence
location: complement(38649..39116)
location: region:38649-39116:-1
so has part: feature:38649-39116:-1:exon
subclass of: SO_0000010

position:38649:-1
position: 38649
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:39116:-1
position: 39116
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:38649-39116:-1:exon

E4T54_RS11840
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 45065
locus tag: E4T54_RS11840
old locus tag: E4T54_11840
inference: COORDINATES: similar to AA sequence:RefSeq:WP_003637168.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MTGKRNTKKLIFKAPQKKKKWLVCVRLPIDIKEKLKSQAEKDYKGRGKQSQLVEDAIRYYLHTVSEIKWTDYERSLDYAELIDDINEGLSQKPLMNATQIFLSDEIMVKILDLEKNIKLTKPLMRDVRIGLIRKALSIRLSLGDKAFFDSIMSLS
SIO_010081: E4T54_RS11840
subclass of: SO_0000673
so part of: E4T54_RS11840
location: complement(38649..39116)
location: region:38649-39116:-1
so has part: feature:38649-39116:-1:exon

WP_028386778.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:38649-39116:-1:exon

E4T54_RS11845
type: Gene
subclass of: SO_0000704
RO_0002162: 45065
locus tag: E4T54_RS11845
old locus tag: E4T54_11845
so part of: sequence
location: complement(39204..40307)
location: region:39204-40307:-1
so has part: feature:39204-40307:-1:exon
subclass of: SO_0000010

position:39204:-1
position: 39204
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:40307:-1
position: 40307
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:39204-40307:-1:exon

E4T54_RS11845
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 45065
locus tag: E4T54_RS11845
old locus tag: E4T54_11845
inference: COORDINATES: similar to AA sequence:RefSeq:WP_003637169.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ParB N-terminal domain-containing protein
translation: MLTKKKIITNSLANKVSKPDTVTRAGITANTKYTRGKQLVEHDPFELIPDPQNPRPGERIDESWLKEHLHLGSDSSLCMYDEKNGQYVIPDFELLNVSKDDELEESYNFLKELAYSIRNEGLIEPIEIFLADKNNDPDYFNNSALEYGYVILEGHQRRLAAMMAGVKTVTCIEITDESMLAKLKVKHRKLRRQLSENNLRKGLTVAQNFKIVQELFSDKTSESLTNKELSSIIGLNESIASALRSICSEPRKYPQILFDKIAKNQLTFKAIRLLVAKSYSEIEKILNDNSKVEETIQKKTKARGKNGGAIKKSATFKINRENEAVLLQKFLIQRFPELEFNQNGEQTFKSLEGILNFIKDLAIRELA
SIO_010081: E4T54_RS11845
subclass of: SO_0000673
so part of: E4T54_RS11845
location: complement(39204..40307)
location: region:39204-40307:-1
so has part: feature:39204-40307:-1:exon

WP_028386777.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:39204-40307:-1:exon

E4T54_RS11850
type: Gene
subclass of: SO_0000704
RO_0002162: 45065
locus tag: E4T54_RS11850
old locus tag: E4T54_11850
so part of: sequence
location: complement(40267..41211)
location: region:40267-41211:-1
so has part: feature:40267-41211:-1:exon
subclass of: SO_0000010

position:40267:-1
position: 40267
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:41211:-1
position: 41211
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:40267-41211:-1:exon

E4T54_RS11850
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 45065
locus tag: E4T54_RS11850
old locus tag: E4T54_11850
inference: COORDINATES: similar to AA sequence:RefSeq:WP_003637170.1
GO function: GO:0005524 - ATP binding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ParA family protein
translation: MAAKKSKVLVVANNKGGVGKSLISQLISTYIAFKKNKKVLVLDFDPQGNMSYRFLRDTRIRDMSSYKPPLHPDYDSNDPEDDGWDGRSSALDMWTERPVVPYPTDLDNLDILPSDAGLIKDIESFEYSDSLESIVRRPYDFFAMDDFIECGYDLVIIDTPPAKGPLTQSAIRAATHVLIPLELSNKSLQGLAGMVDLVNRQNVYRPANSQAKIIGLLKNKVDYNKRTPQNRIIDTIKANPMLRKLLIEDIEIHDSPRAVDIDEDQAPITAPYTELKENDRFAMEAIALGEFVYNAVLGDAENVNKKENNYEFSC
SIO_010081: E4T54_RS11850
subclass of: SO_0000673
so part of: E4T54_RS11850
location: complement(40267..41211)
location: region:40267-41211:-1
so has part: feature:40267-41211:-1:exon

WP_028386776.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:40267-41211:-1:exon

E4T54_RS11855
type: Gene
subclass of: SO_0000704
RO_0002162: 45065
locus tag: E4T54_RS11855
old locus tag: E4T54_11855
so part of: sequence
location: 41758..42810
location: region:41758-42810:1
so has part: feature:41758-42810:1:exon
subclass of: SO_0000010

position:41758:1
position: 41758
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:42810:1
position: 42810
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:41758-42810:1:exon

E4T54_RS11855
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 45065
locus tag: E4T54_RS11855
old locus tag: E4T54_11855
inference: COORDINATES: similar to AA sequence:RefSeq:WP_019233026.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MKPYRQITEDTGIPQSTLERYIKELADDGFIERRQALYSRTSEEGAFTVKKGNYIHVTDKLIQLLQPSMPDIGDNEPDSTNDNSEHAPQDNSSAPDTNNTSADCVFSNPNEGIEPLKIRESYIGDLHSLVNNTIISSKLMQSVDKHTAQRLLRQFESIQTFLFSTIKEEISDEIKKLVAGTFFNLSVVHHQNLSCPEQVVSEYLFALLNTQFYMPAIQCFKHRNNILAKLIRAKNWRTPKGFFKHFYMGQAFKKTQSPEKATSNDHVQSIVGNSAKDPRLSKIEELIFEKGSLVSAMTEEILTLTDEEMILGKRQQIQALREELETLWEQQFDLEQAILRCREGENRLCA
SIO_010081: E4T54_RS11855
subclass of: SO_0000673
so part of: E4T54_RS11855
location: 41758..42810
location: region:41758-42810:1
so has part: feature:41758-42810:1:exon

WP_242604347.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:41758-42810:1:exon

E4T54_RS11860
type: Gene
subclass of: SO_0000704
RO_0002162: 45065
locus tag: E4T54_RS11860
old locus tag: E4T54_11860
so part of: sequence
location: complement(43001..45385)
location: region:43001-45385:-1
so has part: feature:43001-45385:-1:exon
subclass of: SO_0000010

position:43001:-1
position: 43001
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:45385:-1
position: 45385
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:43001-45385:-1:exon

E4T54_RS11860
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 45065
locus tag: E4T54_RS11860
old locus tag: E4T54_11860
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006871466.1
GO process: GO:0000160 - phosphorelay signal transduction system [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: response regulator
translation: MKNREISDNIYPDVVLNAMLSYSGDIAIVIKSNFAIERLNTVSENFYQCSLNDVHGENFLELCCAKHITCPISEHFFNHPEILSFNLDCKNAAGNECNVNWTICPLSATNAEVYGALIIGKDIELKKNNIAYYLNGIIDAIPGCLYWKNCNGYYMGCNNLTAKLAGLSSPHEVVGKTDEELWGEQAANLVVNDTEVITKGVSILVEEKLKTSTGQWMHFTGVKMPLRDENNRIIGIIGNSLDITELKQTQAELKNSMEMAKAANLAKTEFLENMRHDIRTPLTGIVGFADLLKMESDDPHIKEYSENLVASSHALLDLMDEVLEAIRVSSGEIPRLKKKFSLESTFNHVIELNRARAAQKELSLSIEFAEDTPSYMIGDKVRIHRVALELVANALNFTEAGFVKMSVSVARRMEGKIVLKLMVADSGIGIPVEKQQEIYLQFKRLTPSYQGIYKGAGLGLFVVKQFIDELNGEIYVESEAGRGTCFTCLIPLQEPLLDDDSGVDATFENTMDATYVSTITQQIKTREANTHKDTYQVLVVEDNAIAQNAARAILSKMRCTVTIANTGEKAVDLWKNHDYDLIFMDIGLPDIDGYEVTHQIRLHEMIRKTHVPIIALTAHAGDENKQQCITAGMNAVLTKPLSVNACSDILDAFIPGYAPQEPSPALPRQIDTSLLELEDFPLLDVEEGKRVMGGEDNLTEMLDCMIKESLPEDCLRMKKAFSEHDFEKVRKLAHKIKGGAVYVGTTRLKMACQYLEQSQKSGETDLLVPLYEQALNVVEATIHHVSKWLENHHR
SIO_010081: E4T54_RS11860
subclass of: SO_0000673
so part of: E4T54_RS11860
location: complement(43001..45385)
location: region:43001-45385:-1
so has part: feature:43001-45385:-1:exon

WP_242604348.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:43001-45385:-1:exon

E4T54_RS11865
type: Gene
subclass of: SO_0000704
RO_0002162: 45065
locus tag: E4T54_RS11865
old locus tag: E4T54_11865
so part of: sequence
location: complement(45441..46535)
location: region:45441-46535:-1
so has part: feature:45441-46535:-1:exon
subclass of: SO_0000010

position:45441:-1
position: 45441
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:46535:-1
position: 46535
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:45441-46535:-1:exon

E4T54_RS11865
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 45065
locus tag: E4T54_RS11865
old locus tag: E4T54_11865
EC number: 2.1.1.-
inference: COORDINATES: protein motif:HMM:NF025217.2
GO function: GO:0008168 - methyltransferase activity [Evidence IEA]; GO:1904047 - S-adenosyl-L-methionine binding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: class I SAM-dependent methyltransferase
translation: MFKSLSSSSGTRHPGFFPTVIEHYPPILDGKFDYNSAFAAFLAATEQKKQTASMVGLLADKLQKRNVLLKNSESIKVADLGCADGTTCLGYLHNMAHPAGFEYIGFDINDRFIQEANAAISNCALIKKYELIKEDVLAGILSAHPSVHPHSMDLIFISHLAYYLKDEAYCKLFLTDILSLLNNSGIAIFLHEDSTYYFRKTYNTSYTNSSAPSLLKNTAADVLKIAGQFNEISFSSKLHFAEMSDELWQAASTPVRYKEYVDNQDFIDNLNKMSFIVQCDLSRLAHEGSLSSFLHDLRGILEANNNSFNLETSMQVLVSPENIYAKEIDAALREMERDTLIAHAATASPCSSSDQAGVTSVPVL
SIO_010081: E4T54_RS11865
subclass of: SO_0000673
so part of: E4T54_RS11865
location: complement(45441..46535)
location: region:45441-46535:-1
so has part: feature:45441-46535:-1:exon

WP_028386773.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:45441-46535:-1:exon

E4T54_RS11870
type: Gene
subclass of: SO_0000704
RO_0002162: 45065
locus tag: E4T54_RS11870
old locus tag: E4T54_11870
so part of: sequence
location: complement(46694..46933)
location: region:46694-46933:-1
so has part: feature:46694-46933:-1:exon
subclass of: SO_0000010

position:46694:-1
position: 46694
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:46933:-1
position: 46933
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:46694-46933:-1:exon

E4T54_RS11870
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 45065
locus tag: E4T54_RS11870
old locus tag: E4T54_11870
inference: COORDINATES: similar to AA sequence:RefSeq:WP_019218370.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MALISNKSQNSKLKIKAQIDATVLEEIKSYCTWASVEMDFFLEEAARFVFAKDKEWKAQNRKPGRRGRKPAALQDAHGA
SIO_010081: E4T54_RS11870
subclass of: SO_0000673
so part of: E4T54_RS11870
location: complement(46694..46933)
location: region:46694-46933:-1
so has part: feature:46694-46933:-1:exon

WP_035902768.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:46694-46933:-1:exon

E4T54_RS11875
type: Gene
subclass of: SO_0000704
RO_0002162: 45065
locus tag: E4T54_RS11875
old locus tag: E4T54_11875
so part of: sequence
location: complement(47053..47340)
location: region:47053-47340:-1
so has part: feature:47053-47340:-1:exon
subclass of: SO_0000010

position:47053:-1
position: 47053
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:47340:-1
position: 47340
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:47053-47340:-1:exon

E4T54_RS11875
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 45065
locus tag: E4T54_RS11875
old locus tag: E4T54_11875
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011213412.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MKAKNQHIILAALVTSSIACMVTGCSDSDSLSTSKFQTCIEPENPYDEGSGHYAGYQWAIENNAGCDGDSDSFNEGCEDYYNQLDDYESCLSSKQ
SIO_010081: E4T54_RS11875
subclass of: SO_0000673
so part of: E4T54_RS11875
location: complement(47053..47340)
location: region:47053-47340:-1
so has part: feature:47053-47340:-1:exon

WP_081776775.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:47053-47340:-1:exon

E4T54_RS11880
type: Gene
subclass of: SO_0000704
RO_0002162: 45065
locus tag: E4T54_RS11880
old locus tag: E4T54_11880
so part of: sequence
location: complement(47949..48755)
location: region:47949-48755:-1
so has part: feature:47949-48755:-1:exon
subclass of: SO_0000010

position:47949:-1
position: 47949
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:48755:-1
position: 48755
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:47949-48755:-1:exon

E4T54_RS11880
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 45065
locus tag: E4T54_RS11880
old locus tag: E4T54_11880
inference: COORDINATES: similar to AA sequence:RefSeq:WP_001687810.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: abortive infection family protein
translation: MSDLTAVDKRNLERLFGMASGYVLDFTDRTYRDFFADHQIDIDNEKFKSLGTSKANRLRVFWQVENNHTVGKIIEQMIMYGEETGCLFNENDVSSLKRDCLKISQRLKADLPVTEMGALTAISDDLDFNIVAQQVNDSIKKNQPEVGLDRLHTFIIKYIKTVCKPYGIEVPQTKALHSVFGEYVKALRANGHIETEMTERILKSSISVLEAFNHVRNDNSLAHDNPILNYEESLLIFNNISALVRFIKSIEHKIKIKDKKPVCEDIPF
SIO_010081: E4T54_RS11880
subclass of: SO_0000673
so part of: E4T54_RS11880
location: complement(47949..48755)
location: region:47949-48755:-1
so has part: feature:47949-48755:-1:exon

WP_028386772.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:47949-48755:-1:exon

E4T54_RS11885
type: Gene
subclass of: SO_0000704
RO_0002162: 45065
locus tag: E4T54_RS11885
old locus tag: E4T54_11885
so part of: sequence
location: complement(48771..49820)
location: region:48771-49820:-1
so has part: feature:48771-49820:-1:exon
subclass of: SO_0000010

position:48771:-1
position: 48771
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:49820:-1
position: 49820
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:48771-49820:-1:exon

E4T54_RS11885
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 45065
locus tag: E4T54_RS11885
old locus tag: E4T54_11885
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006871708.1
GO function: GO:0003677 - DNA binding [Evidence IEA]
GO process: GO:0015074 - DNA integration [Evidence IEA]; GO:0006310 - DNA recombination [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: tyrosine-type recombinase/integrase
translation: MEKMLTEKALNLLDAQNDKNRKFGVDKIVNPLSVHFDTNSLTAWLSFYYQVHVKGAPEKTESAKQKDLAKFIQFFQTEAGHDQVDGWTPAVSKQFQRTLCIMVSEKTGKAYKATTINRTMATVRHAGRWLHNQRPLLAGNPLSGVKDLQTEAPEWNGLTSKQLMRLKAACEQRTKICTRKNQNSPLETAVFYVLLGTGLRESELVSLNMHQYHSKGLHSVVRHKSRRVSNKIPLPQDAREHLDNYLKTRETALDGALFINRAGNRINTRNIYRICQRVLKQVLALLPENERFEFTPHKLRHTFLKKVTDKHGVHFAQELSGNVSIKEIFRYAKPSQDEMQTTIEELFEN
SIO_010081: E4T54_RS11885
subclass of: SO_0000673
so part of: E4T54_RS11885
location: complement(48771..49820)
location: region:48771-49820:-1
so has part: feature:48771-49820:-1:exon

WP_172607341.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:48771-49820:-1:exon

E4T54_RS11895
type: Gene
subclass of: SO_0000704
RO_0002162: 45065
locus tag: E4T54_RS11895
old locus tag: E4T54_11895
so part of: sequence
location: 50015..50275
location: region:50015-50275:1
so has part: feature:50015-50275:1:exon
subclass of: SO_0000010

position:50015:1
position: 50015
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:50275:1
position: 50275
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:50015-50275:1:exon

E4T54_RS11895
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 45065
locus tag: E4T54_RS11895
old locus tag: E4T54_11895
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MRALNPHDQNVLQEIEHDQIKMFALIELAEQKEKEHLWFDAMELYQEAQHLSFHTGDTLQVKIMNEPSDFENWHRLNKKIEQLKGR
SIO_010081: E4T54_RS11895
subclass of: SO_0000673
so part of: E4T54_RS11895
location: 50015..50275
location: region:50015-50275:1
so has part: feature:50015-50275:1:exon

WP_028386770.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:50015-50275:1:exon

E4T54_RS11900
type: Gene
subclass of: SO_0000704
RO_0002162: 45065
locus tag: E4T54_RS11900
old locus tag: E4T54_11900
so part of: sequence
location: complement(50484..52175)
location: region:50484-52175:-1
so has part: feature:50484-52175:-1:exon
subclass of: SO_0000010

position:50484:-1
position: 50484
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:52175:-1
position: 52175
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:50484-52175:-1:exon

E4T54_RS11900
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 45065
locus tag: E4T54_RS11900
old locus tag: E4T54_11900
inference: COORDINATES: protein motif:HMM:NF025021.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ankyrin repeat domain-containing protein
translation: MSLTAEKIEHVYDAMGRSYAVYEKKEDGKDYVTIAFETVQEYIADWLIGEGMTLVGLGRFAGPLGVFLSIMAPTEMGNGSLPKNDFELQPNQKITLGGGLFLNRCLPQRFDPNHVETDGRHWTALHRAMYEGNVKRVQWLIDKGAKVVKDNEGKYPHDLTDLSLREDANYQRNRLLCETFANPNYVDVPHYRRTALHLAVLAGDVNRVKWLVENGAKVVKDDYGHYPHDLTDLSLREDANYQRNRLLCETFANPNYVDVPHYRRTALHLAVLAGDIDRVKWLVENGAKVVKDDYGHYPHDLTDLSLREDAHYQRNRLLCETYANPNYIDVPHYRRTALHLAFLAGDVVRVKWLVENGAQIVKDDYGNYPHDLTDLSLREDANYQRNRLLCVAAPEYQQELARRTAPAHQPPSLAPATQHAPASTPVKAIQAPAPIMFMPAPKPAKPTGADQIRAFHKRNDDYIKEVKRRSEQRQKDLDCRARQSPPSGLYAGKPSSSGMFGQSRSSFGKMECMTTVNVRTGKPTPDLYCRPMGSSQHFRTFFPDMSAARASCSSIKIVAPKYK
SIO_010081: E4T54_RS11900
subclass of: SO_0000673
so part of: E4T54_RS11900
location: complement(50484..52175)
location: region:50484-52175:-1
so has part: feature:50484-52175:-1:exon

WP_115152895.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:50484-52175:-1:exon

E4T54_RS11905
type: Gene
subclass of: SO_0000704
RO_0002162: 45065
locus tag: E4T54_RS11905
old locus tag: E4T54_11905
so part of: sequence
location: 52566..53117
location: region:52566-53117:1
so has part: feature:52566-53117:1:exon
subclass of: SO_0000010

position:52566:1
position: 52566
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:53117:1
position: 53117
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:52566-53117:1:exon

E4T54_RS11905
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 45065
locus tag: E4T54_RS11905
old locus tag: E4T54_11905
inference: COORDINATES: similar to AA sequence:RefSeq:WP_005655993.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ORF6N domain-containing protein
translation: MKIAVLQAVEDKIIEIRQQAVLIDSDVANLYGVETKRINEAVKNNPEKFPDNYIIFLNEADKSELVENFDRFSNLKHSSVLPKAFTERGLYMLATILKSERATETTLAIVETFAKVKEIERTIKAIPNTPQNSPKYQELMQKTGDLISELVVPDDLETSESEASIEINLALVKFKYTVKKKAK
SIO_010081: E4T54_RS11905
subclass of: SO_0000673
so part of: E4T54_RS11905
location: 52566..53117
location: region:52566-53117:1
so has part: feature:52566-53117:1:exon

WP_028386866.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:52566-53117:1:exon

E4T54_RS11915
type: Gene
subclass of: SO_0000704
RO_0002162: 45065
locus tag: E4T54_RS11915
old locus tag: E4T54_11915
so part of: sequence
location: complement(53388..53639)
location: region:53388-53639:-1
so has part: feature:53388-53639:-1:exon
subclass of: SO_0000010

position:53388:-1
position: 53388
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:53639:-1
position: 53639
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:53388-53639:-1:exon

E4T54_RS11915
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 45065
locus tag: E4T54_RS11915
old locus tag: E4T54_11915
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MKEVLNCLYTLACISFFFLGSILTVHNKLGVGPLYNFNLFLIHTMELSAQEGENLGFYILLVGFILTAFRVLYGYKDEAENQV
SIO_010081: E4T54_RS11915
subclass of: SO_0000673
so part of: E4T54_RS11915
location: complement(53388..53639)
location: region:53388-53639:-1
so has part: feature:53388-53639:-1:exon

WP_028386867.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:53388-53639:-1:exon

E4T54_RS11920
type: Gene
subclass of: SO_0000704
RO_0002162: 45065
locus tag: E4T54_RS11920
old locus tag: E4T54_11920
so part of: sequence
location: complement(53753..54118)
location: region:53753-54118:-1
so has part: feature:53753-54118:-1:exon
subclass of: SO_0000010

position:53753:-1
position: 53753
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:54118:-1
position: 54118
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:53753-54118:-1:exon

E4T54_RS11920
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 45065
locus tag: E4T54_RS11920
old locus tag: E4T54_11920
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015444998.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MKINVILMNAVIASTIALTGCSTTDMKAMVSNGDSVSTTKEHRKPVNQEQVKIYHSKADIPRHYKIIGRVTAQNHNFVGMTFSQESITSELKKQAALIGAQGITNITSGLSQTTAEAIVLK
SIO_010081: E4T54_RS11920
subclass of: SO_0000673
so part of: E4T54_RS11920
location: complement(53753..54118)
location: region:53753-54118:-1
so has part: feature:53753-54118:-1:exon

WP_028386868.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:53753-54118:-1:exon

E4T54_RS12130
type: Gene
subclass of: SO_0000704
RO_0002162: 45065
locus tag: E4T54_RS12130
old locus tag: E4T54_11925
so part of: sequence
location: 54447..54683
location: region:54447-54683:1
so has part: feature:54447-54683:1:exon
subclass of: SO_0000010

position:54447:1
position: 54447
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:54683:1
position: 54683
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:54447-54683:1:exon

E4T54_RS12130
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 45065
locus tag: E4T54_RS12130
old locus tag: E4T54_11925
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015444997.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF6471 domain-containing protein
translation: MDWNKLASGLLKAELKRRNINYEQLIVLLDKIGIHETRAGILNKMSRGSFQFAFFLQCATAIGITNLRLDDVVSTIRP
SIO_010081: E4T54_RS12130
subclass of: SO_0000673
so part of: E4T54_RS12130
location: 54447..54683
location: region:54447-54683:1
so has part: feature:54447-54683:1:exon

WP_035903076.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:54447-54683:1:exon

E4T54_RS11930
type: Gene
subclass of: SO_0000704
RO_0002162: 45065
locus tag: E4T54_RS11930
old locus tag: E4T54_11930
so part of: sequence
location: complement(54700..55140)
location: region:54700-55140:-1
so has part: feature:54700-55140:-1:exon
subclass of: SO_0000010

position:54700:-1
position: 54700
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:55140:-1
position: 55140
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:54700-55140:-1:exon

E4T54_RS11930
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 45065
locus tag: E4T54_RS11930
old locus tag: E4T54_11930
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015444999.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: conjugal transfer protein TraM
translation: MTDQMQTLIKEIAVKHGVSVGQNDPILILQTLNARLMDDNLKAQQAMLDQYKEELEGIALRWGNDAKDKSERILNAALDASKDTMTKLLHDSAISTAMAVKKETEDLLARVGKSLRNTERVAMFNLVASCVTFLAACTVVIGMIFR
SIO_010081: E4T54_RS11930
subclass of: SO_0000673
so part of: E4T54_RS11930
location: complement(54700..55140)
location: region:54700-55140:-1
so has part: feature:54700-55140:-1:exon

WP_028386870.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:54700-55140:-1:exon

E4T54_RS11935
type: Gene
subclass of: SO_0000704
RO_0002162: 45065
locus tag: E4T54_RS11935
old locus tag: E4T54_11935
so part of: sequence
location: complement(55140..55865)
location: region:55140-55865:-1
so has part: feature:55140-55865:-1:exon
subclass of: SO_0000010

position:55865:-1
position: 55865
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:55140-55865:-1:exon

E4T54_RS11935
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 45065
locus tag: E4T54_RS11935
old locus tag: E4T54_11935
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017161207.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ArsA-related P-loop ATPase
translation: MAKIHMILQGKGGVGKSFIAATIAQYKTDKGKSPLCIDTDPVNATFAGYKALNVKQLQIMDGEEINTRNFDELIEMIALIKDDAIIDNGASSFVQLSHYLISNEVPTLLADMGHELVVHTVVTGGQALLDTVNGFSQLVSQFSDNAQFVVWINPYWGSVEHDGKSFEQMKSYNDNKERISAIVQLPTLKEETYGRDMTEMLQERLTFNEAITSPDRTIMTRQRLKIVRDEIFNQLENTAVL
SIO_010081: E4T54_RS11935
subclass of: SO_0000673
so part of: E4T54_RS11935
location: complement(55140..55865)
location: region:55140-55865:-1
so has part: feature:55140-55865:-1:exon

WP_028386871.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:55140-55865:-1:exon

E4T54_RS11940
type: Gene
subclass of: SO_0000704
RO_0002162: 45065
locus tag: E4T54_RS11940
old locus tag: E4T54_11940
so part of: sequence
location: complement(55865..56263)
location: region:55865-56263:-1
so has part: feature:55865-56263:-1:exon
subclass of: SO_0000010

position:56263:-1
position: 56263
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:55865-56263:-1:exon

E4T54_RS11940
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 45065
locus tag: E4T54_RS11940
old locus tag: E4T54_11940
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015445001.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: TraK family protein
translation: MAKPYPEQLAEWVKQRKSNRRDKNLVAFLVIREDVKAAIEAGFPVKTVWENMHESKRIEFGYDTFLNYVNRQIRQPQANRGATHPEPTPQVTTDSNHTKPDTEQNKPATKITKPGVLPAFTYNPIPNIEDLI
SIO_010081: E4T54_RS11940
subclass of: SO_0000673
so part of: E4T54_RS11940
location: complement(55865..56263)
location: region:55865-56263:-1
so has part: feature:55865-56263:-1:exon

WP_028386872.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:55865-56263:-1:exon

E4T54_RS11945
type: Gene
subclass of: SO_0000704
RO_0002162: 45065
gene: traJ
locus tag: E4T54_RS11945
old locus tag: E4T54_11945
so part of: sequence
location: 56623..56976
location: region:56623-56976:1
so has part: feature:56623-56976:1:exon
subclass of: SO_0000010

position:56623:1
position: 56623
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:56976:1
position: 56976
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:56623-56976:1:exon

E4T54_RS11945
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 45065
gene: traJ
locus tag: E4T54_RS11945
old locus tag: E4T54_11945
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012979421.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: conjugal transfer transcriptional regulator TraJ
translation: MSDEQKNPTRKHGRHLRVPVLPDEENEIKANAAKAGLTTAEYLRRLGLGYEIRAMIDNQQVAELAKINADLGRLGGLLKLWLTNDERLAHISPQTMATVLERILNTQAAMLEVVQKL
SIO_010081: E4T54_RS11945
subclass of: SO_0000673
so part of: E4T54_RS11945
location: 56623..56976
location: region:56623-56976:1
so has part: feature:56623-56976:1:exon

WP_028386873.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:56623-56976:1:exon

E4T54_RS11950
type: Gene
subclass of: SO_0000704
RO_0002162: 45065
locus tag: E4T54_RS11950
old locus tag: E4T54_11950
so part of: sequence
location: 57011..59305
location: region:57011-59305:1
so has part: feature:57011-59305:1:exon
subclass of: SO_0000010

position:57011:1
position: 57011
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:59305:1
position: 59305
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:57011-59305:1:exon

E4T54_RS11950
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 45065
locus tag: E4T54_RS11950
old locus tag: E4T54_11950
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011137971.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: TraI/MobA(P) family conjugative relaxase
translation: MIVRHLPVRAGRKSSFAGLVKYITSGQGKQERVGDIRITNCLSHDVVWATHEVLATQAQNQRTQCDKTYHLLISFPPGETPSPDVLKDIEDRVCASIGYGEHQRISAIHYDTDHLHIHIGINKIHPTRFTAHLPYYDYKAFGDIAAKLEIEHGLQQINHKARKTASENRADDMEHHSAEESLLNWIKRDCMKQFQNAKSWSDLHTLMRENGLELCERGSGLIIIDRAGMAVKASSVSRDFSKNKLEKRYGEFERNSYSQSSEKPPLTKRQGVAKPGQKPPPFRQNRLQSLGRLEAIKIDNGAHYNQRPIHMTFNTVELYARYKNEQQQALDFRSKDLGRSRARKDRLIKQAMRTSRLKRTAIKLLKGAGVNKKLLYALVSKALKTDIENARQQHLQERQAIVIKYQRRTWADWLKQRATEGDHEALAALRSREAKQKLTGNTITGKVVHGAGASPGISPDNITKTGTVIYRVGICAIRDDGDLLKVSRGSSEEGLIAALTMAMQRYGERLSVSGSSQFKERIAQVAAGLKLNIIFEDAALEKRRKDLIQTNLMKEINHEHSRQSTLKPRRTNRGSNESIAANRTRRIQQRDGKSDAGIINKPNLGRIGQQPPPESKNRLRDLSQLGVVQLAGGSEMLLPGDVSRNLEHQGTKSDNRLRRDVSGSGAVNKGEEAAEKYIVERNLTREKIVAIPKHRRYNPGEEGSVQFAGIRQINDESLVLLKCNEEVIVMPIDAPMARRMKKLSLGAAVTLTSRGVIITRGRRR
SIO_010081: E4T54_RS11950
subclass of: SO_0000673
so part of: E4T54_RS11950
location: 57011..59305
location: region:57011-59305:1
so has part: feature:57011-59305:1:exon

WP_028386874.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:57011-59305:1:exon

E4T54_RS11955
type: Gene
subclass of: SO_0000704
RO_0002162: 45065
locus tag: E4T54_RS11955
old locus tag: E4T54_11955
so part of: sequence
location: 59475..59777
location: region:59475-59777:1
so has part: feature:59475-59777:1:exon
subclass of: SO_0000010

position:59475:1
position: 59475
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:59777:1
position: 59777
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:59475-59777:1:exon

E4T54_RS11955
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 45065
locus tag: E4T54_RS11955
old locus tag: E4T54_11955
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MNFLNSLLNEHGILLLILFVSTPFLAYFHFYFKPNEYHRMVKKFESMSEQQFLTARKTYARLSKESSQAYSDVELKRIIINNNLNENEVHLWLRACKSSE
SIO_010081: E4T54_RS11955
subclass of: SO_0000673
so part of: E4T54_RS11955
location: 59475..59777
location: region:59475-59777:1
so has part: feature:59475-59777:1:exon

WP_028386875.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:59475-59777:1:exon