Peribacillus frigoritolerans strain JHS1 plasmid p16118, complete sequence.
type: Entry
definition: Peribacillus frigoritolerans strain JHS1 plasmid p16118, complete sequence.
sequence version: NZ_CP091883.1
sequence date: 2023-06-02
sequence: sequence
division: CON
label: NZ_CP091883.1
type: RefSeq
SIO_000068: refseq
dblink: PRJNA224116
dblink: SAMN25608702
keyword: RefSeq
source: Peribacillus frigoritolerans
organism: Peribacillus frigoritolerans
taxonomy: Bacteria; Bacillota; Bacilli; Bacillales; Bacillaceae; Peribacillus.
reference: 1
reference: 2
comment: REFSEQ INFORMATION: The reference sequence is identical to\nCP091883.1.\nBacteria and source DNA available from Genomic and Applied\nMicrobiology & Goettingen Genomics Laboratory.\nThe annotation was added by the NCBI Prokaryotic Genome Annotation\nPipeline (PGAP). Information about PGAP can be found here:\nhttps://www.ncbi.nlm.nih.gov/genome/annotation_prok/\n\n##Genome-Assembly-Data-START##\nAssembly Date :: 21-JAN-2022\nAssembly Method :: Unicycler v. 0.4.9\nAssembly Name :: BCSL_3\nGenome Representation :: Full\nExpected Final Version :: Yes\nGenome Coverage :: 650.0x\nSequencing Technology :: Illumina MiSeq; Oxford Nanopore MinION\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI RefSeq\nAnnotation Date :: 06/02/2023 00:50:09\nAnnotation Pipeline :: NCBI Prokaryotic Genome\n Annotation Pipeline (PGAP)\nAnnotation Method :: Best-placed reference protein\n set; GeneMarkS-2+\nAnnotation Software revision :: 6.5\nFeatures Annotated :: Gene; CDS; rRNA; tRNA; ncRNA\nGenes (total) :: 5,342\nCDSs (total) :: 5,211\nGenes (coding) :: 5,086\nCDSs (with protein) :: 5,086\nGenes (RNA) :: 131\nrRNAs :: 14, 14, 14 (5S, 16S, 23S)\ncomplete rRNAs :: 14, 14, 14 (5S, 16S, 23S)\ntRNAs :: 83\nncRNAs :: 6\nPseudo Genes (total) :: 125\nCDSs (without protein) :: 125\nPseudo Genes (ambiguous residues) :: 0 of 125\nPseudo Genes (frameshifted) :: 69 of 125\nPseudo Genes (incomplete) :: 89 of 125\nPseudo Genes (internal stop) :: 33 of 125\nPseudo Genes (multiple problems) :: 60 of 125\n##Genome-Annotation-Data-END##\nCOMPLETENESS: full length.

sequence
subclass of: SO_0000155
sequence length: 16118
topology: circular
so has quality: SO_0000988
location: 1..16118
location: region:1-16118:1
RO_0002162: 450367

NZ_CP091883
type: RefSeq
SIO_000068: refseq

PRJNA224116
type: BioProject
SIO_000068: bioproject

SAMN25608702
type: BioSample
SIO_000068: biosample

1
title: Complete Genome Sequence of Bacillus frigoritolerans JHS1 isolated from soil of tomato plants in Germany
author: Hollensteiner, J.
author: Shin, J.
author: Boemeke, M.
author: Poehlein, A.
author: Daniel, R.
journal: Unpublished

2
title: Direct Submission
author: Hollensteiner, J.
author: Shin, J.
author: Boemeke, M.
author: Poehlein, A.
author: Daniel, R.
journal: Submitted (03-FEB-2022) Genomic and Applied Microbiology & Goettingen Genomics Laboratory, Georg-August-University Goettingen, Grisebachstr. 8, Goettingen, Lower Saxony 37077, Germany

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:16118:1
position: 16118
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-16118:1:source
so part of: sequence
organism: Peribacillus frigoritolerans
mol type: genomic DNA
strain: JHS1
isolation source: soil from tomato plants
plasmid: p16118
country: Germany
lat lon: 51.51969450 N 9.93785747 E
collection date: 2014-06

450367
type: Taxonomy
SIO_000068: taxonomy

L8956_RS26545
type: Gene
subclass of: SO_0000704
RO_0002162: 450367
locus tag: L8956_RS26545
old locus tag: L8956_26545
so part of: sequence
location: join(15024..16118,1..168)
location: region:1-16118:1
so has part: feature:15024-16118:1:exon
so has part: feature:1-168:1:exon
subclass of: SO_0000010

72371537
type: Gene
SIO_000068: ncbigene

urn:…
SIO_000300: 1
SIO_000628: feature:15024-16118:1:exon

position:15024:1
position: 15024
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1-168:1:exon

position:168:1
position: 168
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

L8956_RS26545
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 450367
locus tag: L8956_RS26545
old locus tag: L8956_26545
inference: COORDINATES: similar to AA sequence:RefSeq:WP_020062667.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: glycosyltransferase family 2 protein
translation: MVKKNSSKHTELEKKICLCMIVKNESRIIERCLNSAKSIIDFVSICDTGSIDQTPEVIGNWCKKNSVPFTVHHKPFENFGYNRTLAAHLAKETYPEADYLLLLDADMILTVNPLFKKSGLNSNQYLIMQYNKHIKYWNTRLIKISLPWRCVGVTHEYWDIDRSMIGSEQCPDIETKGKLESLVINDQEDGGSKSDKFERDKRLLLEGIDDPTTPSNLMIRYLFYLAQTFFCLHEFEESIKWYKKRVKAGGWEEEVFYSLLQIGICYERLGSISSFKLKQLVKEANENKSMVDESTIDNLAQQEEQYFSLATTYFQESWEYRPTRAEPLYHLARIYRINSKHNLSLLYAIQGKEVPFPKNDVLFLDYHVYDYLLDYEISICAYYIESKRDLGRSALNSLQSKIEQLPQDIAGSVESNARFY
SIO_010081: L8956_RS26545
subclass of: SO_0000673
so part of: L8956_RS26545
location: join(15024..16118,1..168)
location: region:1-16118:1
so has part: feature:15024-16118:1:exon
so has part: feature:1-168:1:exon

WP_239861650.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:15024-16118:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1-168:1:exon

L8956_RS26550
type: Gene
subclass of: SO_0000704
RO_0002162: 450367
locus tag: L8956_RS26550
old locus tag: L8956_26550
so part of: sequence
location: 286..1068
location: region:286-1068:1
so has part: feature:286-1068:1:exon
subclass of: SO_0000010

72371538
type: Gene
SIO_000068: ncbigene

position:286:1
position: 286
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1068:1
position: 1068
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:286-1068:1:exon

L8956_RS26550
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 450367
locus tag: L8956_RS26550
old locus tag: L8956_26550
inference: COORDINATES: similar to AA sequence:RefSeq:WP_002116936.1
GO function: GO:0016740 - transferase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: FkbM family methyltransferase
translation: MSSNVKTILKNDVNYSVISKPATEWIWNAIHQNKWEEQTFKIFDRFLNPENSYIDLGAWIGPTVLYGAHKAKHVYGVEPDPVAFNELIINIQLNPFIAKKVTCINAALAEESGTISLYMRSEFGDSTSSLLPTIAENSCKVKAITIHDLINENRIENINFIKMDIEGGEYFLIPTVHDFLQSQKPTLYLSIHPGFLKEHVMLMSSNQGETSDHFNIQTEKLLDCLQFYKYIYDVFGNPVKKDAILDVTYTGEFLFTNECW
SIO_010081: L8956_RS26550
subclass of: SO_0000673
so part of: L8956_RS26550
location: 286..1068
location: region:286-1068:1
so has part: feature:286-1068:1:exon

WP_239861652.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:286-1068:1:exon

L8956_RS26555
type: Gene
subclass of: SO_0000704
RO_0002162: 450367
locus tag: L8956_RS26555
old locus tag: L8956_26555
so part of: sequence
location: 1322..1891
location: region:1322-1891:1
so has part: feature:1322-1891:1:exon
subclass of: SO_0000010

72371539
type: Gene
SIO_000068: ncbigene

position:1322:1
position: 1322
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1891:1
position: 1891
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1322-1891:1:exon

L8956_RS26555
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 450367
locus tag: L8956_RS26555
old locus tag: L8956_26555
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013860497.1
GO function: GO:0003677 - DNA binding [Evidence IEA]
GO process: GO:0015074 - DNA integration [Evidence IEA]; GO:0006310 - DNA recombination [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: tyrosine-type recombinase/integrase
translation: MTQPKDVQPIRDQQQLEDMKWALKRHCSERDYILFVVGCETGLRVGDLLKLTTKQILDLKSKQNKILRVKEGKTQKIRDMYIANCFQEVYEYAKNTQSPYLFPSRKGERPITPTQAYRQLNKAAEFAGVEHVGNHTLRKTFGYWFYKATKDIAMLQRILHHSHPSVTLRYIGITEEETNNVLKHFSVFH
SIO_010081: L8956_RS26555
subclass of: SO_0000673
so part of: L8956_RS26555
location: 1322..1891
location: region:1322-1891:1
so has part: feature:1322-1891:1:exon

WP_239861664.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1322-1891:1:exon

L8956_RS26560
type: Gene
subclass of: SO_0000704
RO_0002162: 450367
locus tag: L8956_RS26560
old locus tag: L8956_26560
so part of: sequence
location: complement(2112..2291)
location: region:2112-2291:-1
so has part: feature:2112-2291:-1:exon
subclass of: SO_0000010

72371540
type: Gene
SIO_000068: ncbigene

position:2112:-1
position: 2112
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2291:-1
position: 2291
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2112-2291:-1:exon

L8956_RS26560
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 450367
locus tag: L8956_RS26560
old locus tag: L8956_26560
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MKKENVDFLEVNMLLNRVEKQHEELRKVTGEGEPYKHLAKQKHVTVYTDDKKAMKFWEE
SIO_010081: L8956_RS26560
subclass of: SO_0000673
so part of: L8956_RS26560
location: complement(2112..2291)
location: region:2112-2291:-1
so has part: feature:2112-2291:-1:exon

WP_239861654.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2112-2291:-1:exon

L8956_RS26565
type: Gene
subclass of: SO_0000704
RO_0002162: 450367
locus tag: L8956_RS26565
old locus tag: L8956_26565
so part of: sequence
location: 2789..4786
location: region:2789-4786:1
so has part: feature:2789-4786:1:exon
subclass of: SO_0000010

72371541
type: Gene
SIO_000068: ncbigene

position:2789:1
position: 2789
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4786:1
position: 4786
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2789-4786:1:exon

L8956_RS26565
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 450367
locus tag: L8956_RS26565
old locus tag: L8956_26565
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006208098.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: peptidase G2 autoproteolytic cleavage domain-containing protein
translation: MANGCNQNPIGACSEAEGINTTANGTASHAEGINTIAGGNAAHTEGFDTETTADTAHAEGYSTTASGFISHAEGLNTTASGVASHAEGYLTTASANTSHAEGSETIATGNSSHAEGFRTAATADTAHAEGYSTTASGFNSHAEGLNTTASGSHAHAEGNNTTAAGENSHTEGLNTQTTISGVNAHAEGEGNTASGRASHAEGGGVDQMGNPAPTLASGDGAHAEGVGTTASGPAAHAEGFQTSASNPAAHAEGISTISNGLASHAEGVDTTASGFASHAEGLSTNASGDSSHAEGEGSVASGLRSHAEGQSTNASGEASHAEGNGTNAFGANSHAEGQNTTTGNAGDPTQGMNAHAEGQFTTASGGFGSHAEGNSTAASGDFGSHAEGNGTTASGDFGSHAEGNGTTASGDFGSHAEGNGTTASGFASHAEGESTNTAGFQNAHIMGRFGDAGEANSWFIGNGTSNAARGLGAKWLSSDGQMYIEGAMYNAGGADFAEMFETVDGKGIDVGYFVTVSEGDKIRIATSSDDFILGISSATPSLIGDSAGLSWHGRYVLDEWGRRTYHEVTVPAVKDPDGNEIIPEKTEIQPVINPEWDPQREYIPRKKRPEWVPVGLIGKILVRDNGTCETHGYCWPNDDGIATASEKGYFVLKRTAPNQILILVK
SIO_010081: L8956_RS26565
subclass of: SO_0000673
so part of: L8956_RS26565
location: 2789..4786
location: region:2789-4786:1
so has part: feature:2789-4786:1:exon

WP_239861655.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2789-4786:1:exon

L8956_RS26570
type: Gene
subclass of: SO_0000704
RO_0002162: 450367
locus tag: L8956_RS26570
old locus tag: L8956_26570
so part of: sequence
location: 5589..6203
location: region:5589-6203:1
so has part: feature:5589-6203:1:exon
subclass of: SO_0000010

72371542
type: Gene
SIO_000068: ncbigene

position:5589:1
position: 5589
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6203:1
position: 6203
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5589-6203:1:exon

L8956_RS26570
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 450367
locus tag: L8956_RS26570
old locus tag: L8956_26570
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MKIKEILDDLLITGNTIAKIAKEKVCIGEKKLKEALHNAGYEYRNSGQKGWYYVGEGEEPLYTSVFEFIKSNNSHPKVKQTTPIHAFNVNQSSPTSSHDTKKDSHPIPLDVNSVRTQDHTEFTPEERAILRDLIRGYVLNDQQDSHGDDLYQRVVTLEKGKKVRKTIVINEEVGALLDSFADQQKFNKSELIEIAILDLVKKYK
SIO_010081: L8956_RS26570
subclass of: SO_0000673
so part of: L8956_RS26570
location: 5589..6203
location: region:5589-6203:1
so has part: feature:5589-6203:1:exon

WP_239861657.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:5589-6203:1:exon

L8956_RS26575
type: Gene
subclass of: SO_0000704
RO_0002162: 450367
locus tag: L8956_RS26575
old locus tag: L8956_26575
so part of: sequence
location: complement(6660..6890)
location: region:6660-6890:-1
so has part: feature:6660-6890:-1:exon
subclass of: SO_0000010

72371543
type: Gene
SIO_000068: ncbigene

position:6660:-1
position: 6660
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6890:-1
position: 6890
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6660-6890:-1:exon

L8956_RS26575
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 450367
locus tag: L8956_RS26575
old locus tag: L8956_26575
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MSISSKKKNLNIRKDVNLATFTASYVPKEFVQAVKPFFDHAAMIEDFWKSVFLDTKAISHIVEQETITYTAINEEK
SIO_010081: L8956_RS26575
subclass of: SO_0000673
so part of: L8956_RS26575
location: complement(6660..6890)
location: region:6660-6890:-1
so has part: feature:6660-6890:-1:exon

WP_239861659.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:6660-6890:-1:exon

L8956_RS26580
type: Gene
subclass of: SO_0000704
RO_0002162: 450367
locus tag: L8956_RS26580
old locus tag: L8956_26580
so part of: sequence
location: 7167..7577
location: region:7167-7577:1
so has part: feature:7167-7577:1:exon
subclass of: SO_0000010

72371544
type: Gene
SIO_000068: ncbigene

position:7167:1
position: 7167
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7577:1
position: 7577
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7167-7577:1:exon

L8956_RS26580
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 450367
locus tag: L8956_RS26580
old locus tag: L8956_26580
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: exosporium protein C
translation: MMANIVSVGTSVPAQGSGSLNRPVTTTPINLAEFGLDIPQGANRVILNATVGVTSALLAPVLIFNVFRGDQVIFSSREEGLLSAGQELTISFQAIDTNVPATASQRYLVTVQLESAFTAANVTGPVTFSGVSYTFP
SIO_010081: L8956_RS26580
subclass of: SO_0000673
so part of: L8956_RS26580
location: 7167..7577
location: region:7167-7577:1
so has part: feature:7167-7577:1:exon

WP_239861660.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:7167-7577:1:exon

L8956_RS26585
type: Gene
subclass of: SO_0000704
RO_0002162: 450367
locus tag: L8956_RS26585
old locus tag: L8956_26585
so part of: sequence
location: complement(7818..8633)
location: region:7818-8633:-1
so has part: feature:7818-8633:-1:exon
subclass of: SO_0000010

72371545
type: Gene
SIO_000068: ncbigene

position:7818:-1
position: 7818
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8633:-1
position: 8633
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7818-8633:-1:exon

L8956_RS26585
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 450367
locus tag: L8956_RS26585
old locus tag: L8956_26585
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MLSGRIENFKDYSKFSSIKEFNNTIEMFLAEHKKDFTKGELVAFKRLVRFSAKYAGVANAKIGTLVKAINEKLNGFGVSRSTFERMLRKAKDLGIVSIVNTKKSKGGKGHNVYIFNTIDVLKKRKLTYCENQENPCCSKDESSNFERETSNLLETSKKKNLNIRKDVNLDSTFTASYVPKEFVQAVKPFFDHAAMIEDFWKSVFLDTKAISHIVEQETITYTAINAFKQSIRGYKRGKVKTNLVRYFTGTFKRLMDRTYAELPLDVFITSN
SIO_010081: L8956_RS26585
subclass of: SO_0000673
so part of: L8956_RS26585
location: complement(7818..8633)
location: region:7818-8633:-1
so has part: feature:7818-8633:-1:exon

WP_239861662.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:7818-8633:-1:exon

L8956_RS26590
type: Gene
subclass of: SO_0000704
RO_0002162: 450367
locus tag: L8956_RS26590
old locus tag: L8956_26590
so part of: sequence
location: 9116..10603
location: region:9116-10603:1
so has part: feature:9116-10603:1:exon
subclass of: SO_0000010

72371546
type: Gene
SIO_000068: ncbigene

position:9116:1
position: 9116
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:10603:1
position: 10603
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9116-10603:1:exon

L8956_RS26590
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 450367
locus tag: L8956_RS26590
old locus tag: L8956_26590
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MTISPFQRLVSNTSDVFLGVGREQAAMNAANNTGNHPDLVDRFLRCPQWPSINKYDNDTTTQSFSPFGGDSNPDYIWDLPTSDGQTVAFAIASDQFTIPAGSTASFSVSLAAFADNAMEAKIELFERIGGSFVKAAPQPSGLGDLLLVSGDPNNPAIGLTINDPPFTFQDIQVYSTRFTAPSSKILKIVLSFEATNYLIQPQFASNPSSLNNPAGLQFVVDIYAENPAFLYVSNVDDNTVEIYDISNPATPAHITQFGAVDLTQPRGMAIIGTTLYVTNFNGASVEIYDITIPTAPVRITEINGGNLGGPNFLAITGTTLYVSSTADVVDIYDISNPTAPVHVTDFGAAGNSDMAITGTTLYLANFSGNTVAIYDITNPIAPVLVTQFNGLNLQQPTGLAITGTTLYVTNQSDVNVDIYDISSPTAPVRVTQFDANVSTPTDAVVIDTTLYLAGSNSNTVAIFDISNPTAPVFVKVFNGLNLDGPFGLAIFTLFD
SIO_010081: L8956_RS26590
subclass of: SO_0000673
so part of: L8956_RS26590
location: 9116..10603
location: region:9116-10603:1
so has part: feature:9116-10603:1:exon

WP_239861643.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:9116-10603:1:exon

L8956_RS26595
type: Gene
subclass of: SO_0000704
RO_0002162: 450367
locus tag: L8956_RS26595
old locus tag: L8956_26595
so part of: sequence
location: complement(11191..11817)
location: region:11191-11817:-1
so has part: feature:11191-11817:-1:exon
subclass of: SO_0000010

72371547
type: Gene
SIO_000068: ncbigene

position:11191:-1
position: 11191
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:11817:-1
position: 11817
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11191-11817:-1:exon

L8956_RS26595
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 450367
locus tag: L8956_RS26595
old locus tag: L8956_26595
inference: COORDINATES: similar to AA sequence:RefSeq:WP_016094076.1
GO function: GO:0003677 - DNA binding [Evidence IEA]
GO process: GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: MerR family transcriptional regulator
translation: MNKSENPSDEKQVENLDKGFTVKEVASFIDETPNVIRNWFKELRQYIPHEKSDKGNGYNIYKREGIERFKEIQALHREQNWSMKQIEHYFATGGESFKPEPEKKAGELIAEELKAIREEMAALREENKQMKEQLDNQETFNKEFVIPGIQQIKGEVSSIRGSIERDKELDESNRAAKEAKQLIAAANENPDTNPDKQKKGFFARLFGK
SIO_010081: L8956_RS26595
subclass of: SO_0000673
so part of: L8956_RS26595
location: complement(11191..11817)
location: region:11191-11817:-1
so has part: feature:11191-11817:-1:exon

WP_239861645.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:11191-11817:-1:exon

L8956_RS26600
type: Gene
subclass of: SO_0000704
RO_0002162: 450367
locus tag: L8956_RS26600
old locus tag: L8956_26600
so part of: sequence
location: 12676..13731
location: region:12676-13731:1
so has part: feature:12676-13731:1:exon
subclass of: SO_0000010

72371548
type: Gene
SIO_000068: ncbigene

position:12676:1
position: 12676
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:13731:1
position: 13731
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:12676-13731:1:exon

L8956_RS26600
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 450367
locus tag: L8956_RS26600
old locus tag: L8956_26600
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: collagen-like protein
translation: MSTSLGLSPVPTTPTYVGDISLQTQAVVGTPEQSSVRIALWGTVGVSASVPNNLTITIERNSTGSPAVPGSGTVIYSLTSEFADNLVTMVSFHAADFPPAVVVTGQIRYTMFIRAAGAGIILRGPVAFSGMAAAGTFDGTPSGPTGPTGPTGPPGPAGPTGTGDTGDTGPTGATGATGGTGDTGPTGATGATGDTGDTGPTGATGATGATGDTGPTGPTGATGGTGDTGPTGATGATGDTGPTGATGATGDTGDTGPTGATGATGDTGPTGPTGATGDTGDTGPTGPTGATGATGDTGPTGATGDTGPTGPTGATGDTGPTGPTGATGDTGDTGPTGPTGATGATGPTGPP
SIO_010081: L8956_RS26600
subclass of: SO_0000673
so part of: L8956_RS26600
location: 12676..13731
location: region:12676-13731:1
so has part: feature:12676-13731:1:exon

WP_239861646.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:12676-13731:1:exon

L8956_RS26605
type: Gene
subclass of: SO_0000704
RO_0002162: 450367
locus tag: L8956_RS26605
old locus tag: L8956_26605
so part of: sequence
location: 13895..14980
location: region:13895-14980:1
so has part: feature:13895-14980:1:exon
subclass of: SO_0000010

72371549
type: Gene
SIO_000068: ncbigene

position:13895:1
position: 13895
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:14980:1
position: 14980
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:13895-14980:1:exon

L8956_RS26605
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 450367
locus tag: L8956_RS26605
old locus tag: L8956_26605
EC number: 2.4.-.-
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013274170.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: glycosyltransferase
translation: MEKLKIAVYAICKNEAKFIDRWMDSIEEADMVVVTDTGSTDDSVAKLESRGAIVYRVEINPWRFDVARNMALNFVPDDVDVCIMLDMDEVFEPGWREKIEKIWTPKTNRLQYVFTWSFNRDGSRGITFLAEKIHSRRGYRWVGAVHEHLKFYGPNLEVYAKEESIRINHYPDQTKSRGQYLPLLELTVKEDPNHDRNMHYLGREYIYYNMWDKCIETLKKHLSMPSATWKDERCASMRFIAKAYKEKGDRREAKNWLYKAIAEAPHLREPYIEMAQFAYKEQDWPTVYHMAEETLKIQDRTLSYLNQPFAWNETIYDLGAISCYYLEMYHKSYEWAKNALEINPNDVRLQSNLKIIKLKVE
SIO_010081: L8956_RS26605
subclass of: SO_0000673
so part of: L8956_RS26605
location: 13895..14980
location: region:13895-14980:1
so has part: feature:13895-14980:1:exon

WP_239861648.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:13895-14980:1:exon