Peribacillus frigoritolerans strain JHS1 plasmid p16118, complete sequence.
Bacteria; Bacillota; Bacilli; Bacillales; Bacillaceae; Peribacillus.
Complete Genome Sequence of Bacillus frigoritolerans JHS1 isolated from soil of tomato plants in Germany
Submitted (03-FEB-2022) Genomic and Applied Microbiology & Goettingen Genomics Laboratory, Georg-August-University Goettingen, Grisebachstr. 8, Goettingen, Lower Saxony 37077, Germany
REFSEQ INFORMATION: The reference sequence is identical to\nCP091883.1.\nBacteria and source DNA available from Genomic and Applied\nMicrobiology & Goettingen Genomics Laboratory.\nThe annotation was added by the NCBI Prokaryotic Genome Annotation\nPipeline (PGAP). Information about PGAP can be found here:\nhttps://www.ncbi.nlm.nih.gov/genome/annotation_prok/\n\n##Genome-Assembly-Data-START##\nAssembly Date :: 21-JAN-2022\nAssembly Method :: Unicycler v. 0.4.9\nAssembly Name :: BCSL_3\nGenome Representation :: Full\nExpected Final Version :: Yes\nGenome Coverage :: 650.0x\nSequencing Technology :: Illumina MiSeq; Oxford Nanopore MinION\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI RefSeq\nAnnotation Date :: 06/02/2023 00:50:09\nAnnotation Pipeline :: NCBI Prokaryotic Genome\n Annotation Pipeline (PGAP)\nAnnotation Method :: Best-placed reference protein\n set; GeneMarkS-2+\nAnnotation Software revision :: 6.5\nFeatures Annotated :: Gene; CDS; rRNA; tRNA; ncRNA\nGenes (total) :: 5,342\nCDSs (total) :: 5,211\nGenes (coding) :: 5,086\nCDSs (with protein) :: 5,086\nGenes (RNA) :: 131\nrRNAs :: 14, 14, 14 (5S, 16S, 23S)\ncomplete rRNAs :: 14, 14, 14 (5S, 16S, 23S)\ntRNAs :: 83\nncRNAs :: 6\nPseudo Genes (total) :: 125\nCDSs (without protein) :: 125\nPseudo Genes (ambiguous residues) :: 0 of 125\nPseudo Genes (frameshifted) :: 69 of 125\nPseudo Genes (incomplete) :: 89 of 125\nPseudo Genes (internal stop) :: 33 of 125\nPseudo Genes (multiple problems) :: 60 of 125\n##Genome-Annotation-Data-END##\nCOMPLETENESS: full length.
COORDINATES: similar to AA sequence:RefSeq:WP_020062667.1
Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_002116936.1
GO:0016740 - transferase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013860497.1
GO:0015074 - DNA integration [Evidence IEA]; GO:0006310 - DNA recombination [Evidence IEA]
COORDINATES: ab initio prediction:GeneMarkS-2+
Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
COORDINATES: similar to AA sequence:RefSeq:WP_006208098.1
peptidase G2 autoproteolytic cleavage domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_016094076.1
GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013274170.1