Nostoc sphaeroides strain Kutzing En plasmid p4, complete sequence.
type: Entry
definition: Nostoc sphaeroides strain Kutzing En plasmid p4, complete sequence.
sequence version: NZ_CP031945.1
sequence date: 2023-03-25
sequence: sequence
division: CON
label: NZ_CP031945.1
type: RefSeq
SIO_000068: refseq
dblink: PRJNA224116
dblink: SAMN09925536
keyword: RefSeq
source: Nostoc sphaeroides
organism: Nostoc sphaeroides
taxonomy: Bacteria; Cyanobacteriota; Cyanophyceae; Nostocales; Nostocaceae; Nostoc.
reference: 1
reference: 2
comment: REFSEQ INFORMATION: The reference sequence is identical to\nCP031945.1.\nBacteria and source DNA available from Cheng Chao, Hubei University\nfor Nationalities China.\nThe annotation was added by the NCBI Prokaryotic Genome Annotation\nPipeline (PGAP). Information about PGAP can be found here:\nhttps://www.ncbi.nlm.nih.gov/genome/annotation_prok/\nThis genome has a base modification file available.\n\n##Genome-Assembly-Data-START##\nAssembly Method :: HGAP v. Oct-2013\nAssembly Name :: HBEN_NSP_1.0\nGenome Representation :: Full\nExpected Final Version :: Yes\nGenome Coverage :: 168.0x\nSequencing Technology :: PacBio\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI RefSeq\nAnnotation Date :: 03/25/2023 00:12:53\nAnnotation Pipeline :: NCBI Prokaryotic Genome\n Annotation Pipeline (PGAP)\nAnnotation Method :: Best-placed reference protein\n set; GeneMarkS-2+\nAnnotation Software revision :: 6.4\nFeatures Annotated :: Gene; CDS; rRNA; tRNA; ncRNA\nGenes (total) :: 6,093\nCDSs (total) :: 6,005\nGenes (coding) :: 5,761\nCDSs (with protein) :: 5,761\nGenes (RNA) :: 88\nrRNAs :: 4, 4, 4 (5S, 16S, 23S)\ncomplete rRNAs :: 4, 4, 4 (5S, 16S, 23S)\ntRNAs :: 72\nncRNAs :: 4\nPseudo Genes (total) :: 244\nCDSs (without protein) :: 244\nPseudo Genes (ambiguous residues) :: 0 of 244\nPseudo Genes (frameshifted) :: 83 of 244\nPseudo Genes (incomplete) :: 168 of 244\nPseudo Genes (internal stop) :: 36 of 244\nPseudo Genes (multiple problems) :: 37 of 244\nCRISPR Arrays :: 3\n##Genome-Annotation-Data-END##\nCOMPLETENESS: full length.

sequence
subclass of: SO_0000155
sequence length: 35774
topology: circular
so has quality: SO_0000988
location: 1..35774
location: region:1-35774:1
RO_0002162: 446679

NZ_CP031945
type: RefSeq
SIO_000068: refseq

PRJNA224116
type: BioProject
SIO_000068: bioproject

SAMN09925536
type: BioSample
SIO_000068: biosample

1
title: Evidence for the Nostoc sphaeroides, a unique species of cyanobacteria with high nutritional and medicinal value: from a genomic perspective
author: Wang, Q.
author: Cheng, C.
journal: Unpublished

2
title: Direct Submission
author: Cheng, C.
author: Li, W.
author: Wang, Q.
author: Fang, Q.
journal: Submitted (28-AUG-2018) Key Laboratory of Biological Resources Protection and Utilization of Hubei Province, Hubei University for Nationalities, 39 Xueyuan Road, Enshi 445000, China

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:35774:1
position: 35774
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-35774:1:source
so part of: sequence
organism: Nostoc sphaeroides
mol type: genomic DNA
strain: Kutzing En
isolation source: water
plasmid: p4
country: China: Enshi
collection date: 2018-06

446679
type: Taxonomy
SIO_000068: taxonomy

D1367_RS32555
type: Gene
subclass of: SO_0000704
RO_0002162: 446679
locus tag: D1367_RS32555
so part of: sequence
location: complement(join(35750..35774,1..332))
location: region:1-35774:-1
so has part: feature:1-332:-1:exon
so has part: feature:35750-35774:-1:exon
subclass of: SO_0000010

position:1:-1
position: 1
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:35774:-1
position: 35774
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1-332:-1:exon

position:332:-1
position: 332
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:35750-35774:-1:exon

position:35750:-1
position: 35750
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

D1367_RS32555
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 446679
locus tag: D1367_RS32555
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MVAQLTGQETVSRSVMPGAFASFDIRNFLHQLEPSKAKNKFICPVCGGNDLSIVPETGKYRCFNNCECKDIREAIKPWAEVVAERAGANYTPSLNQNVAKPKRILPKRAPMPKVNWVV
SIO_010081: D1367_RS32555
subclass of: SO_0000673
so part of: D1367_RS32555
location: complement(join(35750..35774,1..332))
location: region:1-35774:-1
so has part: feature:1-332:-1:exon
so has part: feature:35750-35774:-1:exon

WP_244945044.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1-332:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:35750-35774:-1:exon

D1367_RS31955
type: Gene
subclass of: SO_0000704
RO_0002162: 446679
locus tag: D1367_RS31955
pseudo: true
so part of: sequence
location: 1131..2129
location: region:1131-2129:1
so has part: feature:1131-2129:1:exon
subclass of: SO_0000010

position:1131:1
position: 1131
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2129:1
position: 2129
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1131-2129:1:exon

D1367_RS31955
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 446679
locus tag: D1367_RS31955
inference: COORDINATES: similar to AA sequence:RefSeq:WP_041238570.1
note: frameshifted; internal stop; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: transposase
SIO_010081: D1367_RS31955
subclass of: SO_0000673
so part of: D1367_RS31955
location: 1131..2129
location: region:1131-2129:1
so has part: feature:1131-2129:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1131-2129:1:exon

D1367_RS29810
type: Gene
subclass of: SO_0000704
RO_0002162: 446679
gene: gvpA
locus tag: D1367_RS29810
so part of: sequence
location: 2848..3063
location: region:2848-3063:1
so has part: feature:2848-3063:1:exon
subclass of: SO_0000010

position:2848:1
position: 2848
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3063:1
position: 3063
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2848-3063:1:exon

D1367_RS29810
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 446679
gene: gvpA
locus tag: D1367_RS29810
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017803924.1
note: There are 14 genes on the gvp gene cluster in halophilic archaea. The product of gvpA is a structural component of gas vesicles, which provide buoyancy to cells and promote flotation. It has been reported that the products of gvpAO and gvpFGJKLM represent the minimal set required for gas vesicle formation in halophilic archaea; Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: gas vesicle structural protein GvpA
translation: MAVEKTNSSSSLAEVIDRILDKGIVIDAWVRVSLVGIELLAIEARIVIASVETYLKYAEAVGLTQSAAVPA
SIO_010081: D1367_RS29810
subclass of: SO_0000673
so part of: D1367_RS29810
location: 2848..3063
location: region:2848-3063:1
so has part: feature:2848-3063:1:exon

WP_015080752.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2848-3063:1:exon

D1367_RS29815
type: Gene
subclass of: SO_0000704
RO_0002162: 446679
gene: gvpA
locus tag: D1367_RS29815
so part of: sequence
location: 3169..3384
location: region:3169-3384:1
so has part: feature:3169-3384:1:exon
subclass of: SO_0000010

position:3169:1
position: 3169
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3384:1
position: 3384
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3169-3384:1:exon

D1367_RS29815
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 446679
gene: gvpA
locus tag: D1367_RS29815
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017803924.1
note: There are 14 genes on the gvp gene cluster in halophilic archaea. The product of gvpA is a structural component of gas vesicles, which provide buoyancy to cells and promote flotation. It has been reported that the products of gvpAO and gvpFGJKLM represent the minimal set required for gas vesicle formation in halophilic archaea; Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: gas vesicle structural protein GvpA
translation: MAVEKTNSSSSLAEVIDRILDKGIVIDAWVRVSLVGIELLAIEARIVIASVETYLKYAEAVGLTQSAAVPA
SIO_010081: D1367_RS29815
subclass of: SO_0000673
so part of: D1367_RS29815
location: 3169..3384
location: region:3169-3384:1
so has part: feature:3169-3384:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3169-3384:1:exon

D1367_RS29820
type: Gene
subclass of: SO_0000704
RO_0002162: 446679
gene: gvpC
locus tag: D1367_RS29820
so part of: sequence
location: 3852..4346
location: region:3852-4346:1
so has part: feature:3852-4346:1:exon
subclass of: SO_0000010

position:3852:1
position: 3852
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4346:1
position: 4346
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3852-4346:1:exon

D1367_RS29820
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 446679
gene: gvpC
locus tag: D1367_RS29820
inference: COORDINATES: similar to AA sequence:RefSeq:WP_019492275.1
GO component: GO:0031411 - gas vesicle [Evidence IEA]
GO process: GO:0031412 - gas vesicle organization [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: gas vesicle protein GvpC
translation: MTALIEKIRQEHQSIAEEVSQLFKETHEFLSSTTADRQEKAKKQAQELHQFHQNLEQTTQEFLAEAAKERFAQAKAQAKFLHEFYQELEETTHEFLAETKKERFVQAKAQAKYLHDYYQELQEATQEFLGETAKERTEKANAQRQYLHEFRQNLSVSIFGTLIR
SIO_010081: D1367_RS29820
subclass of: SO_0000673
so part of: D1367_RS29820
location: 3852..4346
location: region:3852-4346:1
so has part: feature:3852-4346:1:exon

WP_118171794.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3852-4346:1:exon

D1367_RS29825
type: Gene
subclass of: SO_0000704
RO_0002162: 446679
gene: gvpN
locus tag: D1367_RS29825
so part of: sequence
location: 4766..6055
location: region:4766-6055:1
so has part: feature:4766-6055:1:exon
subclass of: SO_0000010

position:4766:1
position: 4766
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6055:1
position: 6055
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4766-6055:1:exon

D1367_RS29825
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 446679
gene: gvpN
locus tag: D1367_RS29825
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010996409.1
GO function: GO:0005198 - structural molecule activity [Evidence IEA]
GO process: GO:0031412 - gas vesicle organization [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: gas vesicle protein GvpN
translation: MTITANNNKRAVLRVRPGQFVVTPAIEQVAIRALRYLASGFAIHLRGPAGTGKTTLAMHLANCLDRPIMLIFGDDEFKSSDLIGSESGYTHKKLLDNYIHSVLKVEDEFKQNWVDSRLTLACREGLTLVYDEFNRSRPEVNNVLLSALEEKILTLPPSSNQPEYLHVHSQFRAIFTSNPEEYCGVHSTQDALMDRLVTINMPEPDELTQTEILANKTGINRLDAHLIVQLVKAFRLRTGGEKTSGLRSCLMIAKVCAEHNILVSPENSDFREICADVLFNRTKWSASEATTIFLELLNHIRVLPVEESQDSITPENTDAMLTAFPERLVDVASPKEESEAGAEGGFPTIIDSNFSDLHPEDPQQPVVDKPVPFEKEIYQYLQQRKSAALAVIQKEFNLNRISTTNALNALEQKGLVSKNDRLYTIEEPN
SIO_010081: D1367_RS29825
subclass of: SO_0000673
so part of: D1367_RS29825
location: 4766..6055
location: region:4766-6055:1
so has part: feature:4766-6055:1:exon

WP_118171795.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4766-6055:1:exon

D1367_RS29830
type: Gene
subclass of: SO_0000704
RO_0002162: 446679
locus tag: D1367_RS29830
so part of: sequence
location: 6058..6507
location: region:6058-6507:1
so has part: feature:6058-6507:1:exon
subclass of: SO_0000010

position:6058:1
position: 6058
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6507:1
position: 6507
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6058-6507:1:exon

D1367_RS29830
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 446679
locus tag: D1367_RS29830
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011316973.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: gas vesicle protein
translation: MTTTPLHPTRPQVNSNRVVPTSTQGSTLADILERVLDKGIVIAGDISISIASTELIHIRIRLLISSVDKAREMGINWWENDPYLSSKAQRLVEENQQLQQRLESLESQLRLLTSASVKHEATVVANNQDDFQPMYEVNGQLEKDSQVEA
SIO_010081: D1367_RS29830
subclass of: SO_0000673
so part of: D1367_RS29830
location: 6058..6507
location: region:6058-6507:1
so has part: feature:6058-6507:1:exon

WP_118171796.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:6058-6507:1:exon

D1367_RS29835
type: Gene
subclass of: SO_0000704
RO_0002162: 446679
locus tag: D1367_RS29835
so part of: sequence
location: 6597..7070
location: region:6597-7070:1
so has part: feature:6597-7070:1:exon
subclass of: SO_0000010

position:6597:1
position: 6597
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7070:1
position: 7070
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6597-7070:1:exon

D1367_RS29835
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 446679
locus tag: D1367_RS29835
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006276397.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: gas vesicle protein K
translation: MAMVCTPSEKSPDLLPTTSKANSKAGLAPLLLTVVELVRQLMEAQVIRRMEQNSLSESDLERAGESLQKLEEQVLNLCEIFEIEPADLNINLGDVGTLLPSPGSYYPGEIGNQPSILELLDRLLNTGIVVDGEVDLGIAQLNLIHAKLRLVLTSRPL
SIO_010081: D1367_RS29835
subclass of: SO_0000673
so part of: D1367_RS29835
location: 6597..7070
location: region:6597-7070:1
so has part: feature:6597-7070:1:exon

WP_118171797.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:6597-7070:1:exon

D1367_RS29840
type: Gene
subclass of: SO_0000704
RO_0002162: 446679
locus tag: D1367_RS29840
so part of: sequence
location: 7244..7981
location: region:7244-7981:1
so has part: feature:7244-7981:1:exon
subclass of: SO_0000010

position:7244:1
position: 7244
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7981:1
position: 7981
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7244-7981:1:exon

D1367_RS29840
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 446679
locus tag: D1367_RS29840
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015080757.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: GvpL/GvpF family gas vesicle protein
translation: MTFGLYLYGIFPEPIPETVALKGLDSQPVYSQVIDGFTFLYSEAQHEKYLASRRNLINHEKVLEQAMQAGFRTLLPLRFGLVVKDWETVVTQLLQPYKEQLRELFQKLAGRREVSVKIFWDSKSELQALMESHQDLKQKRDQMEGKALSMEEVIHIGQLIENNLASRKESIIQAFFDELKPLADEIIENDPMTEDMIYNVAFLIPWEQEPVFSEQVEAIDQKFGERLRIRYNNFTAPYTFAQIAS
SIO_010081: D1367_RS29840
subclass of: SO_0000673
so part of: D1367_RS29840
location: 7244..7981
location: region:7244-7981:1
so has part: feature:7244-7981:1:exon

WP_118171798.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:7244-7981:1:exon

D1367_RS32560
type: Gene
subclass of: SO_0000704
RO_0002162: 446679
locus tag: D1367_RS32560
pseudo: true
so part of: sequence
location: 7993..>8214
location: region:7993-8214:1
so has part: feature:7993-8214:1:exon
subclass of: SO_0000010

position:7993:1
position: 7993
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8214:1
position: 8214
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7993-8214:1:exon

D1367_RS32560
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 446679
locus tag: D1367_RS32560
inference: COORDINATES: similar to AA sequence:RefSeq:WP_002747915.1
note: incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: gas vesicle protein GvpG
SIO_010081: D1367_RS32560
subclass of: SO_0000673
so part of: D1367_RS32560
location: 7993..>8214
location: region:7993-8214:1
so has part: feature:7993-8214:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:7993-8214:1:exon

D1367_RS29850
type: Gene
subclass of: SO_0000704
RO_0002162: 446679
locus tag: D1367_RS29850
so part of: sequence
location: complement(8612..8926)
location: region:8612-8926:-1
so has part: feature:8612-8926:-1:exon
subclass of: SO_0000010

position:8612:-1
position: 8612
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8926:-1
position: 8926
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8612-8926:-1:exon

D1367_RS29850
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 446679
locus tag: D1367_RS29850
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011316969.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: gas vesicle protein
translation: MRKIRNQGIIRPKISTMPRNQSEASNQLELYKLITEKQRIKQELAFIEQRKVLLTKRLSTLQNQIDTTENNIKHLRDAESEVPPVARPKIFVETNTYRAFDIEY
SIO_010081: D1367_RS29850
subclass of: SO_0000673
so part of: D1367_RS29850
location: complement(8612..8926)
location: region:8612-8926:-1
so has part: feature:8612-8926:-1:exon

WP_181985251.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:8612-8926:-1:exon

D1367_RS29855
type: Gene
subclass of: SO_0000704
RO_0002162: 446679
locus tag: D1367_RS29855
so part of: sequence
location: 9079..9762
location: region:9079-9762:1
so has part: feature:9079-9762:1:exon
subclass of: SO_0000010

position:9079:1
position: 9079
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9762:1
position: 9762
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9079-9762:1:exon

D1367_RS29855
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 446679
locus tag: D1367_RS29855
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011316968.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: GvpL/GvpF family gas vesicle protein
translation: MRSQNFYTYAFFNTPDFPVNLPSGNLGELVLINGKNISAVVEPGISVESSQNDDDQVIKMVLAHDRVICELSRQMTVLPLRFGTYFISEDTLLNHIESHAQEYQEKLNNIQGKNEYTLKVIPHKVEELAKPSGANGKDYFLAKKQYYEQQKSFFAAQNQEKYHLINLITETYQSSAIIQDRAEEVRFHLLVDRYDKALLLEQVLSWQEKCPHWNLILGEPLPPYHFI
SIO_010081: D1367_RS29855
subclass of: SO_0000673
so part of: D1367_RS29855
location: 9079..9762
location: region:9079-9762:1
so has part: feature:9079-9762:1:exon

WP_118171801.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:9079-9762:1:exon

D1367_RS29860
type: Gene
subclass of: SO_0000704
RO_0002162: 446679
locus tag: D1367_RS29860
so part of: sequence
location: 9801..11705
location: region:9801-11705:1
so has part: feature:9801-11705:1:exon
subclass of: SO_0000010

position:9801:1
position: 9801
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:11705:1
position: 11705
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9801-11705:1:exon

D1367_RS29860
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 446679
locus tag: D1367_RS29860
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010996402.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ArsA family ATPase
translation: MNYYDSLHLVMFSGKGGVGKTTISCSFARYWARKFPEEKILLISTDPAHSLGDVLQSEVKDIALPITDLPNLSVQALDAQKLLLEFKAKYSYFLEMLVERGSLADGGDLAPVWDLNWPGLNELMGLLEIERLLSEKKVDRVVIDMAPSGHTLSLLGLKDFLDVILNSLELFQEKHRVITTTFSGSYTADEVDNFLVEMKTELAEGRRLLQDEKFTGCLVVGISEPMCFLETERFLNSLETLEVPYAGLFINRILLNSELEPDRYAEQQNLLKKYLELSPNHPVFILPQQRVEPLGEVALDSLASQIKQIESVELAPPPLIQWPAKVLPSFHDFLNEGCQLIIVGGKGGVGKTTVGAAIAWASSQQHPDKNIRVISIDPAHSLGDAFGTNLGHEPISLASNLSGQEIDAHQVLEKFRVDYLWELADMISGEGSQTDTTINVAYVPEAWRQIMSQALPGIDEMLALITVMDLLDSKQQDLIILDTAPTGHLLQFLEMPSALGDWLSWIFKLWIKYQDVLGRVDFIGRLRHLRQQVVQAQKKLKNPQHTQFIGVIQSEFAIISEHIRLTESLKNMGVNQRYVVQNRYSREVQIDGSLFPEQTMIRLPSLPRSVEPIARIQGAANLLFEVEELTKNKR
SIO_010081: D1367_RS29860
subclass of: SO_0000673
so part of: D1367_RS29860
location: 9801..11705
location: region:9801-11705:1
so has part: feature:9801-11705:1:exon

WP_181985252.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:9801-11705:1:exon

D1367_RS29865
type: Gene
subclass of: SO_0000704
RO_0002162: 446679
locus tag: D1367_RS29865
so part of: sequence
location: 11743..13584
location: region:11743-13584:1
so has part: feature:11743-13584:1:exon
subclass of: SO_0000010

position:11743:1
position: 11743
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:13584:1
position: 13584
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11743-13584:1:exon

D1367_RS29865
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 446679
locus tag: D1367_RS29865
inference: COORDINATES: similar to AA sequence:RefSeq:WP_002737235.1
GO function: GO:0005524 - ATP binding [Evidence IEA]; GO:0016887 - ATP hydrolysis activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: AAA family ATPase
translation: MSDLFKGFEQLIELVKTLEEKVEKGEIKTDFQINSRSMGNIPRSGNMPRPNNMANDIGTSRIRTQPSPNSDAGNAAAPDIVPPPDAPSGNALKDIGGLNEILKELKELIAIPLKRPDLLAKLGLEPTRGVLLVGPPGTGKTLTARALAEELGVNYIAIVGPEIIGKYYGEAEQRLRGIFEKAAKNAPCIIFIDEIDSLAPDRNSVEGEVEKRVVAQLLGLMDGFSHSQGVIVLAATNRPDHLDPALRRPGRFDREVQFRIPDVKGRRDILEILTRAMPLDETVNLDVIAEGAVGFVGADLKAVCQKAAYIALRRQIPSIEGQIPENMTVSQADFLQGLKEIKPAVLRSVEVEVPHIAWEDIGGLDKIKETLRESVEGALLYPELYLQTKALAPKGILLWGPPGTGKTLLAKAVASQAKANFISVNGPELLTRWVGASEQAVRELFAKARQAEPCVVFIDEIDTLAPARGSYNGDSGVSDRVVGQLLTELDGIEVGSTILVIGATNRPDALDPALLRAGRLDLQMKVDLPDLASRLAILQVHSQGRPLQDVDLNYWAEMTQDWNGADLTLLCNQAAVEAIRRFRSQGLTEPTEIRITTDDFNYAYQVLTQQRSD
SIO_010081: D1367_RS29865
subclass of: SO_0000673
so part of: D1367_RS29865
location: 11743..13584
location: region:11743-13584:1
so has part: feature:11743-13584:1:exon

WP_118171803.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:11743-13584:1:exon

D1367_RS29870
type: Gene
subclass of: SO_0000704
RO_0002162: 446679
locus tag: D1367_RS29870
so part of: sequence
location: 13805..14176
location: region:13805-14176:1
so has part: feature:13805-14176:1:exon
subclass of: SO_0000010

position:13805:1
position: 13805
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:14176:1
position: 14176
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:13805-14176:1:exon

D1367_RS29870
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 446679
locus tag: D1367_RS29870
inference: COORDINATES: protein motif:HMM:NF024940.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: helix-turn-helix domain-containing protein
translation: MTKIWARSFWVFLTGDQDKTLLNLRTADAPQKVKDRAEIIRLNAHGWYVEKIAAHFKWTPQTVREVLHKWEKLGIQGLWDKPGRGGKSKCKESDIVFLEGCLKKEARTYNSLQLAQKGSNAIL
SIO_010081: D1367_RS29870
subclass of: SO_0000673
so part of: D1367_RS29870
location: 13805..14176
location: region:13805-14176:1
so has part: feature:13805-14176:1:exon

WP_118171804.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:13805-14176:1:exon

D1367_RS29875
type: Gene
subclass of: SO_0000704
RO_0002162: 446679
locus tag: D1367_RS29875
pseudo: true
so part of: sequence
location: <14381..>14587
location: region:14381-14587:1
so has part: feature:14381-14587:1:exon
subclass of: SO_0000010

position:14381:1
position: 14381
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

position:14587:1
position: 14587
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:14381-14587:1:exon

D1367_RS29875
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 446679
locus tag: D1367_RS29875
inference: COORDINATES: similar to AA sequence:RefSeq:WP_076611205.1
GO function: GO:0004803 - transposase activity [Evidence IEA]
GO process: GO:0006313 - transposition, DNA-mediated [Evidence IEA]
note: incomplete; partial in the middle of a contig; missing N-terminus and C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: Tn3 family transposase
SIO_010081: D1367_RS29875
subclass of: SO_0000673
so part of: D1367_RS29875
location: <14381..>14587
location: region:14381-14587:1
so has part: feature:14381-14587:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:14381-14587:1:exon

D1367_RS31490
type: Gene
subclass of: SO_0000704
RO_0002162: 446679
locus tag: D1367_RS31490
so part of: sequence
location: complement(14564..14743)
location: region:14564-14743:-1
so has part: feature:14564-14743:-1:exon
subclass of: SO_0000010

position:14564:-1
position: 14564
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:14743:-1
position: 14743
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:14564-14743:-1:exon

D1367_RS31490
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 446679
locus tag: D1367_RS31490
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MASAEFTSLESTQAVPTVETPLDGEQVNVDTSTSTGIESTTAIFQAVGVITGSVRDVLQ
SIO_010081: D1367_RS31490
subclass of: SO_0000673
so part of: D1367_RS31490
location: complement(14564..14743)
location: region:14564-14743:-1
so has part: feature:14564-14743:-1:exon

WP_152592987.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:14564-14743:-1:exon

D1367_RS29880
type: Gene
subclass of: SO_0000704
RO_0002162: 446679
locus tag: D1367_RS29880
so part of: sequence
location: complement(14852..17917)
location: region:14852-17917:-1
so has part: feature:14852-17917:-1:exon
subclass of: SO_0000010

position:14852:-1
position: 14852
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:17917:-1
position: 17917
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:14852-17917:-1:exon

D1367_RS29880
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 446679
locus tag: D1367_RS29880
inference: COORDINATES: protein motif:HMM:NF020289.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF3854 domain-containing protein
translation: MVATFNGSSTTATNDVRGHLDQLTLAPLLSEPRNQATQPNSVEQIWTNESVKQHWISFDAFKDFIKQKFGRDRLCAEQFDAMIEFTDSPCRIAEALRWKKPYSGVVYAALMLNADGSVWHSILSLPNDDGTKPYKRLAPSKNGDQCFYPRVVPTIRRLIEQQMGLEKGSIPDDVDFYEWLANSELPLITTEGGEKLFSLICQGYPATTNYGATCGVDKKTKRFKPSLQRIMNRPRTLLVAYDMDSNPSVVASVNKGIDALSYSAQKVGSTVSRPTWDESLGKGIDDLLLTPNGSTLWAQSYNLALCLAIITKMLGIGAVHEVNSFEQLEQLAQLYGTIVELNILKTRMSADNLIAALNQQIRELTHGKDAVESKSHQSKSYQSKSKLIPADILAFELAEDYRERLKYCNEYKEWKYYLGDDSGLWKSQDDHMIETMIQGILDARSIVGYGTDSYIVNIRKFMARRLTVETWPQRTGIVPFLDGVLVLATGKFEKHSPGNYLTWTLPHRFDNPSLRDWPTIRGWFQEVTEGDSQKIQTLICFAAATLRGMSHLQKILYLWGNGGNGKGIYSDILTALVGSENTWSGKIENLDNPNFLVDILNKRSVIFEDQDKVNGGLQTFKTLTGGGSTKAKEVYKKACDVRLSATVLITSNYAALQGSGVGRWLKRRLIVVNMNYCPPIVDTHLREKLYPEMGAFTQYLLTIPESEIINTLNGKNSTGYDLAYWEMAQMTDSIAAWVERHIVRDPKGVVKVGSNKNEWQSSSYRPEISTLFGSYHHYCQNSGQQGKSLPNFTPDLLQVLNHVLGWSDVKQEKTRTGSHFYGIRLRGTFDEAPFPSESSITSNQAGDGGVTDKVMDMVMDSKPYGDGCDGHLQKNLFVNEVNNHPSNFLKSESLGDEKTDFVESLGKTPSPPSQPSPEIAITHTPLALPSISPNHHQSVTNPSPAPSASVTTRQPVRGDRVKLISSGEEYKISWVSCGSDKVLLVSALTGEPFTAPSLLRPGAAAGGLNLIDVSELEFLDT
SIO_010081: D1367_RS29880
subclass of: SO_0000673
so part of: D1367_RS29880
location: complement(14852..17917)
location: region:14852-17917:-1
so has part: feature:14852-17917:-1:exon

WP_118171805.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:14852-17917:-1:exon

D1367_RS29885
type: Gene
subclass of: SO_0000704
RO_0002162: 446679
locus tag: D1367_RS29885
pseudo: true
so part of: sequence
location: complement(18396..18639)
location: region:18396-18639:-1
so has part: feature:18396-18639:-1:exon
subclass of: SO_0000010

position:18396:-1
position: 18396
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:18639:-1
position: 18639
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:18396-18639:-1:exon

D1367_RS29885
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 446679
locus tag: D1367_RS29885
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015209322.1
note: frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: hypothetical protein
SIO_010081: D1367_RS29885
subclass of: SO_0000673
so part of: D1367_RS29885
location: complement(18396..18639)
location: region:18396-18639:-1
so has part: feature:18396-18639:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:18396-18639:-1:exon

D1367_RS29890
type: Gene
subclass of: SO_0000704
RO_0002162: 446679
locus tag: D1367_RS29890
so part of: sequence
location: complement(18632..18820)
location: region:18632-18820:-1
so has part: feature:18632-18820:-1:exon
subclass of: SO_0000010

position:18632:-1
position: 18632
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:18820:-1
position: 18820
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:18632-18820:-1:exon

D1367_RS29890
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 446679
locus tag: D1367_RS29890
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MTSRDLKENLTRLRKQSYWQVAASEEYCRRIAKKTGRRLVEIIDTEDEPLPIVCIFEDYTDD
SIO_010081: D1367_RS29890
subclass of: SO_0000673
so part of: D1367_RS29890
location: complement(18632..18820)
location: region:18632-18820:-1
so has part: feature:18632-18820:-1:exon

WP_228676628.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:18632-18820:-1:exon

D1367_RS31495
type: Gene
subclass of: SO_0000704
RO_0002162: 446679
locus tag: D1367_RS31495
so part of: sequence
location: complement(18830..18967)
location: region:18830-18967:-1
so has part: feature:18830-18967:-1:exon
subclass of: SO_0000010

position:18830:-1
position: 18830
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:18967:-1
position: 18967
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:18830-18967:-1:exon

D1367_RS31495
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 446679
locus tag: D1367_RS31495
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MIPSQPDLKSLPSLQMRSLKTNQMINPSAIGLKSLPWLPLDEWSE
SIO_010081: D1367_RS31495
subclass of: SO_0000673
so part of: D1367_RS31495
location: complement(18830..18967)
location: region:18830-18967:-1
so has part: feature:18830-18967:-1:exon

WP_181985250.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:18830-18967:-1:exon

D1367_RS29895
type: Gene
subclass of: SO_0000704
RO_0002162: 446679
locus tag: D1367_RS29895
so part of: sequence
location: complement(18948..19130)
location: region:18948-19130:-1
so has part: feature:18948-19130:-1:exon
subclass of: SO_0000010

position:18948:-1
position: 18948
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:19130:-1
position: 19130
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:18948-19130:-1:exon

D1367_RS29895
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 446679
locus tag: D1367_RS29895
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015180758.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MPPDNKQEVTVSFRVFLPESLRTEFKVWCARENTNMSEKTRSLIEQWIETKVKANDSKPA
SIO_010081: D1367_RS29895
subclass of: SO_0000673
so part of: D1367_RS29895
location: complement(18948..19130)
location: region:18948-19130:-1
so has part: feature:18948-19130:-1:exon

WP_118171806.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:18948-19130:-1:exon

D1367_RS29900
type: Gene
subclass of: SO_0000704
RO_0002162: 446679
locus tag: D1367_RS29900
so part of: sequence
location: 19719..20099
location: region:19719-20099:1
so has part: feature:19719-20099:1:exon
subclass of: SO_0000010

position:19719:1
position: 19719
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:20099:1
position: 20099
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:19719-20099:1:exon

D1367_RS29900
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 446679
locus tag: D1367_RS29900
inference: COORDINATES: protein motif:HMM:NF039626.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF6009 family protein
translation: MSVKSQTPSDIQFESKIVWLSNIDAIPYVREYFNTCCSRRKGKVKYQTYQIIGYAELEDNAPNTGRSGCFARRIFWLAKHDRFYQPDGVYKQGCPIEAIDPLTVFPKVLGQITTRAWNGTLSQEVD
SIO_010081: D1367_RS29900
subclass of: SO_0000673
so part of: D1367_RS29900
location: 19719..20099
location: region:19719-20099:1
so has part: feature:19719-20099:1:exon

WP_118171807.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:19719-20099:1:exon

D1367_RS29905
type: Gene
subclass of: SO_0000704
RO_0002162: 446679
locus tag: D1367_RS29905
so part of: sequence
location: complement(20242..20589)
location: region:20242-20589:-1
so has part: feature:20242-20589:-1:exon
subclass of: SO_0000010

position:20242:-1
position: 20242
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:20589:-1
position: 20589
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:20242-20589:-1:exon

D1367_RS29905
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 446679
locus tag: D1367_RS29905
inference: COORDINATES: protein motif:HMM:NF024139.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: helix-turn-helix domain-containing protein
translation: MVKPAFESRQIATEQQPQTGKLVHSSGEIAEFGEIGVIDKLSSIIEGLLGRSDNQPVVPIADKLLLTIAEAQALTGLSREFLRDAITAGELKAKVIGKGWRVKRSDLQEYVDKLF
SIO_010081: D1367_RS29905
subclass of: SO_0000673
so part of: D1367_RS29905
location: complement(20242..20589)
location: region:20242-20589:-1
so has part: feature:20242-20589:-1:exon

WP_118171808.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:20242-20589:-1:exon

D1367_RS29910
type: Gene
subclass of: SO_0000704
RO_0002162: 446679
locus tag: D1367_RS29910
so part of: sequence
location: 20751..22049
location: region:20751-22049:1
so has part: feature:20751-22049:1:exon
subclass of: SO_0000010

position:20751:1
position: 20751
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:22049:1
position: 22049
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:20751-22049:1:exon

D1367_RS29910
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 446679
locus tag: D1367_RS29910
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015201526.1
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: IS4 family transposase
translation: MVEDEVIAEQLERLLTPAITNQENYYRKLGLRERILNLPLMMAAVLTLLWRDVAGVRELTRILARDGFLWCNPTKVSQQAVSQRFLTFPSELFEKVFFDLLPSLRTAWHSRNKRRLPESIQFTLLKFEKIWIVDGSTLEALFRKLQSLEEAQRGQLAGKMSTVIDLMTRLPVEIWFEENPKASDIKLSENILNLVTARTLLLLDRGFYHFNFWHQIIEKKVDFITRIKKGAAIKVEQVFTDSYGLRDRKIRLGSGTNKTPFITLRLVEVRSGKTWHSYLTSVLDPHVLPPYVVADLYRRRWRIEDAFNIVKRLLGLSYLWTGSINGIKLQIWATWLFYAVLVDLGDAVADELSLPFDDISLEMIYRGLYHFTMAHQKGKATDPVKYFADPQNRDLGIIKQRRKPNIKLIVAPFPDLQRGSNQFFFNNSLKAS
SIO_010081: D1367_RS29910
subclass of: SO_0000673
so part of: D1367_RS29910
location: 20751..22049
location: region:20751-22049:1
so has part: feature:20751-22049:1:exon

WP_118171809.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:20751-22049:1:exon

D1367_RS29915
type: Gene
subclass of: SO_0000704
RO_0002162: 446679
locus tag: D1367_RS29915
so part of: sequence
location: complement(22239..25502)
location: region:22239-25502:-1
so has part: feature:22239-25502:-1:exon
subclass of: SO_0000010

position:22239:-1
position: 22239
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:25502:-1
position: 25502
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:22239-25502:-1:exon

D1367_RS29915
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 446679
locus tag: D1367_RS29915
inference: COORDINATES: protein motif:HMM:NF020289.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF3854 domain-containing protein
translation: MVATFNGSSTTATNDVRGHLDQLTLAPLLSEPRNQATQPNSVEQIWTNESVKQHWISFDAFKDFIKQKFGRDRLCAEQFDAMIEFTDSPCRIAEALRWKKPYSGVVYAALMLNADGSVWHSILSLPNDDGTKPYKRLAPSKNGDQCFYPRVVPTIRRLIEQQMGLEKGSIPDDVDFYEWLANSELPLITTEGGEKLFSLICQGYPATTNYGATCGVDKKTKRFKPSLQRIMNRPRTLLVAYDMDSNPSVVASVNKGIDALSYSAQKVGSTVSRPTWDESLGKGIDDLLLTPNGSTLWAQSYNLALCLAIITKMLGIGAVHEVNSFEQLEQLAQLYGTIVELNILKTRMSADNLIAALNQQIRELTHGKDAVESKSHQSKSYQSKSKLIPADILAFELAEDYRERLKYCNEYKEWKYYLGDDSGLWKSQDDHMIETMIQGILDARSIVGYGTDSYIVNIRKFMARRLTVETWPQRTGIVPFLDGVLVLATGKFEKHSPGNYLTWTLPHRFDNPSLRDWPTIRGWFQEVTEGDSQKIQTLICFAAATLRGMSHLQKILYLWGNGGNGKGIYSDILTALVGSENTWSGKIENLDNPNFLVDILNKRSVIFEDQDKVNGGLQTFKTLTGGGSTKAKEVYKKACDVRLSATVLITSNYAALQGSGVGRWLKRRLIVVNMNYCPPIVDTHLREKLYPEMGAFTQYLLTIPESEIINTLNGKNSTGYDLAYWEMAQMTDSIAAWVERHIVRDPKGVVKVGSNKNEWQSSSYRPEISTLFGSYHHYCQNSGQQGKSLPNFTPDLLQVLNHVLGWSDVKQEKTRTGSHFYGIRLRGTFDEAPFPSESSITSNQAGDGGVTDKVMDMVMDSKPYGDGCDGHLQKNLFVNEVNNHPSNFLKSESLGDEKTDFVESLGKTPSPPSQPSPEIAITHTPLALPSISPNHHQSVTNPSPAPSASVTTRQPVRGDRVRLKESGEVCLISWVSCGSDKVLLVSALTGQPLTATSKLRPGAAAGGLNLIDVSELEFLDAVAQLKIGERVRYVGSDASLVAQELSIYKPEKSGYSCTNQQKYLITNPQGNRRIFAASELQLIESNT
SIO_010081: D1367_RS29915
subclass of: SO_0000673
so part of: D1367_RS29915
location: complement(22239..25502)
location: region:22239-25502:-1
so has part: feature:22239-25502:-1:exon

WP_118171810.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:22239-25502:-1:exon

D1367_RS29920
type: Gene
subclass of: SO_0000704
RO_0002162: 446679
locus tag: D1367_RS29920
so part of: sequence
location: complement(26041..26223)
location: region:26041-26223:-1
so has part: feature:26041-26223:-1:exon
subclass of: SO_0000010

position:26041:-1
position: 26041
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:26223:-1
position: 26223
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:26041-26223:-1:exon

D1367_RS29920
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 446679
locus tag: D1367_RS29920
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MTETATLMPLSTFIPVLTAISDRDWVRFKDLVVSFAPRSRDRNLGRCFQLENHARARARG
SIO_010081: D1367_RS29920
subclass of: SO_0000673
so part of: D1367_RS29920
location: complement(26041..26223)
location: region:26041-26223:-1
so has part: feature:26041-26223:-1:exon

WP_228676627.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:26041-26223:-1:exon

D1367_RS29925
type: Gene
subclass of: SO_0000704
RO_0002162: 446679
locus tag: D1367_RS29925
so part of: sequence
location: complement(26216..26377)
location: region:26216-26377:-1
so has part: feature:26216-26377:-1:exon
subclass of: SO_0000010

position:26216:-1
position: 26216
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:26377:-1
position: 26377
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:26216-26377:-1:exon

D1367_RS29925
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 446679
locus tag: D1367_RS29925
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MTQLRKQSYWQVAASEEYCRRIAKKTGRRLVEIIDTEDEPLPIVCIFEDYTDD
SIO_010081: D1367_RS29925
subclass of: SO_0000673
so part of: D1367_RS29925
location: complement(26216..26377)
location: region:26216-26377:-1
so has part: feature:26216-26377:-1:exon

WP_225893062.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:26216-26377:-1:exon

D1367_RS29930
type: Gene
subclass of: SO_0000704
RO_0002162: 446679
locus tag: D1367_RS29930
so part of: sequence
location: complement(26408..26593)
location: region:26408-26593:-1
so has part: feature:26408-26593:-1:exon
subclass of: SO_0000010

position:26408:-1
position: 26408
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:26593:-1
position: 26593
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:26408-26593:-1:exon

D1367_RS29930
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 446679
locus tag: D1367_RS29930
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015178554.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MSKRFSVTVPDYVFEDLEAIARIQGRPTATLVAFLVEAFVRDAREKGELPSAKPPKQDGAA
SIO_010081: D1367_RS29930
subclass of: SO_0000673
so part of: D1367_RS29930
location: complement(26408..26593)
location: region:26408-26593:-1
so has part: feature:26408-26593:-1:exon

WP_069074669.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:26408-26593:-1:exon

D1367_RS29935
type: Gene
subclass of: SO_0000704
RO_0002162: 446679
locus tag: D1367_RS29935
so part of: sequence
location: complement(26654..26869)
location: region:26654-26869:-1
so has part: feature:26654-26869:-1:exon
subclass of: SO_0000010

position:26654:-1
position: 26654
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:26869:-1
position: 26869
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:26654-26869:-1:exon

D1367_RS29935
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 446679
locus tag: D1367_RS29935
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MDNQKVAFMSNWVIVGRPKGDKPDEVAHLRARMPKDLHTEFKLWCVKNNRTMDTVICELVQEFLDKQHSQG
SIO_010081: D1367_RS29935
subclass of: SO_0000673
so part of: D1367_RS29935
location: complement(26654..26869)
location: region:26654-26869:-1
so has part: feature:26654-26869:-1:exon

WP_118171811.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:26654-26869:-1:exon

D1367_RS31960
type: Gene
subclass of: SO_0000704
RO_0002162: 446679
locus tag: D1367_RS31960
so part of: sequence
location: 27109..27387
location: region:27109-27387:1
so has part: feature:27109-27387:1:exon
subclass of: SO_0000010

position:27109:1
position: 27109
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:27387:1
position: 27387
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:27109-27387:1:exon

D1367_RS31960
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 446679
locus tag: D1367_RS31960
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MRVTIRQSLHPFISNKAQELGINDHAEVVNFLLLQILLSFDAVTGSHKGEPRYSVVLKRMFHETVSTVASMFQPHNNRETILSRALNMKHET
SIO_010081: D1367_RS31960
subclass of: SO_0000673
so part of: D1367_RS31960
location: 27109..27387
location: region:27109-27387:1
so has part: feature:27109-27387:1:exon

WP_220451054.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:27109-27387:1:exon

D1367_RS29945
type: Gene
subclass of: SO_0000704
RO_0002162: 446679
locus tag: D1367_RS29945
so part of: sequence
location: 27541..27822
location: region:27541-27822:1
so has part: feature:27541-27822:1:exon
subclass of: SO_0000010

position:27541:1
position: 27541
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:27822:1
position: 27822
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:27541-27822:1:exon

D1367_RS29945
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 446679
locus tag: D1367_RS29945
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MPSKKVIHLMLDAGRSSIKYQAFVNNETGTTPVMKTESLVCCVPSVPFGELGAFSLSRGKDENNKDVVEHWVVGDSARLQAIEQCRDRSGDRP
SIO_010081: D1367_RS29945
subclass of: SO_0000673
so part of: D1367_RS29945
location: 27541..27822
location: region:27541-27822:1
so has part: feature:27541-27822:1:exon

WP_118171813.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:27541-27822:1:exon

D1367_RS29950
type: Gene
subclass of: SO_0000704
RO_0002162: 446679
locus tag: D1367_RS29950
so part of: sequence
location: 28032..28316
location: region:28032-28316:1
so has part: feature:28032-28316:1:exon
subclass of: SO_0000010

position:28032:1
position: 28032
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:28316:1
position: 28316
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:28032-28316:1:exon

D1367_RS29950
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 446679
locus tag: D1367_RS29950
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MTLRIQILKDKFSQSLGLPFKELLSESAINIALSELKIRYKKRLFDPIVTIPELLAAASTKRLQIYQIAVIPLPQRFVVRGCKAVKNETPSDQN
SIO_010081: D1367_RS29950
subclass of: SO_0000673
so part of: D1367_RS29950
location: 28032..28316
location: region:28032-28316:1
so has part: feature:28032-28316:1:exon

WP_118171814.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:28032-28316:1:exon

D1367_RS29955
type: Gene
subclass of: SO_0000704
RO_0002162: 446679
locus tag: D1367_RS29955
so part of: sequence
location: 28397..29635
location: region:28397-29635:1
so has part: feature:28397-29635:1:exon
subclass of: SO_0000010

position:28397:1
position: 28397
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:29635:1
position: 29635
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:28397-29635:1:exon

D1367_RS29955
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 446679
locus tag: D1367_RS29955
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006198315.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: RNA-guided endonuclease TnpB family protein
translation: MIVFEAKLEGQNEQYRALDEAIRTARFVRNSCLRYWMDNKGIGRYDLNKFCAVLAASIEFPWVDKLNSMARQASAERAWSAIARFFDNCKKGKPGKKGFPKFKKEQTHGSVEYKTCGWKLSDDRRYITFSDGFKAGTFKLWGTRDLHFYQLKQFKRVRVVRRADGYYCQFCIDQERVERREPTGKTIGIDVGLNHFYTDSNGETVPNPRHLRKSEKSLRRLQRRMSKTKKGSQNRIKFRNKLARKHLKVSRQRKDFAVKTARCVVRSNDLVAYEDLMVRNMVKNHRLAKSISDASWSLFRDWVEYFGKVFGVVTVAVPPHYTSQNCSNCGEVVKKTFLTRTHVCPHCGHTQDRDWNAARNILEKGLSTAGHVGTNASGETDQYLSEETPSSKSTRGKRKPRERSLESPPSTK
SIO_010081: D1367_RS29955
subclass of: SO_0000673
so part of: D1367_RS29955
location: 28397..29635
location: region:28397-29635:1
so has part: feature:28397-29635:1:exon

WP_118171815.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:28397-29635:1:exon

D1367_RS29965
type: Gene
subclass of: SO_0000704
RO_0002162: 446679
locus tag: D1367_RS29965
so part of: sequence
location: complement(29915..30877)
location: region:29915-30877:-1
so has part: feature:29915-30877:-1:exon
subclass of: SO_0000010

position:29915:-1
position: 29915
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:30877:-1
position: 30877
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:29915-30877:-1:exon

D1367_RS29965
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 446679
locus tag: D1367_RS29965
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013325789.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: site-specific integrase
translation: MNAIASNFNPESLALTEPVPLTLHPAEVYLNSLGEGSRRTMREALNAIAQLLTSGTSDASTLDWSKLRYQHTAAVRSVLMEKYSPAMANKMLCALRRTLKEAWRLELMSTDEYGRAADIESVRGKSLLKGREIDAEEISALWDDCIQDDSTLGRRDAALLAVLTVGLRRSEVTYLDLSDFKPRTRSLTIREAKGRKERIVYLPEAGVQAVLDWLLIRGKAPGALFYPLNKANKIIHRRMSEQGVLRALQRRGEKADVDAFTPHDFRRTFIGNLLDAGADIVTIAKLAGHASPNTTSKYDRRGEAAKKRAIDLLNVPYKRH
SIO_010081: D1367_RS29965
subclass of: SO_0000673
so part of: D1367_RS29965
location: complement(29915..30877)
location: region:29915-30877:-1
so has part: feature:29915-30877:-1:exon

WP_118171816.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:29915-30877:-1:exon

D1367_RS29970
type: Gene
subclass of: SO_0000704
RO_0002162: 446679
locus tag: D1367_RS29970
so part of: sequence
location: complement(31068..31595)
location: region:31068-31595:-1
so has part: feature:31068-31595:-1:exon
subclass of: SO_0000010

position:31068:-1
position: 31068
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:31595:-1
position: 31595
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:31068-31595:-1:exon

D1367_RS29970
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 446679
locus tag: D1367_RS29970
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017744654.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MTAIFPDVEKFKCIDPRQVEAYLVGHGWQQQQRQGDKAAIWTLDGFEILLPLKGEIIDFSRRMAEVVETLALAETRDQQSILGDLITNAPNTTIQAVVTHIATPNADHKSGDITMLGIVVDKLRPIHTQLADRDYILALKAYQERLPVYCTGDLIKSNGVFILKNPHKFRLDHSE
SIO_010081: D1367_RS29970
subclass of: SO_0000673
so part of: D1367_RS29970
location: complement(31068..31595)
location: region:31068-31595:-1
so has part: feature:31068-31595:-1:exon

WP_118171817.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:31068-31595:-1:exon

D1367_RS29975
type: Gene
subclass of: SO_0000704
RO_0002162: 446679
locus tag: D1367_RS29975
so part of: sequence
location: complement(31592..32095)
location: region:31592-32095:-1
so has part: feature:31592-32095:-1:exon
subclass of: SO_0000010

position:31592:-1
position: 31592
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:32095:-1
position: 32095
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:31592-32095:-1:exon

D1367_RS29975
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 446679
locus tag: D1367_RS29975
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015179331.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF4365 domain-containing protein
translation: MSLNTQKEDFSYAYVYAVTATAGYSLQAATRRLDDSGIDATITVPGKLNSKRLPRFDVQIKSTSQDVKRETSIKYRLSVKNYDELREDDPFVPQLLIVVLVPEEVSDWLSQTEESISLKRCGYWLSLRGQPAIDNKTNITVEIKRQNIFSPDALKTIMSRIAVGETL
SIO_010081: D1367_RS29975
subclass of: SO_0000673
so part of: D1367_RS29975
location: complement(31592..32095)
location: region:31592-32095:-1
so has part: feature:31592-32095:-1:exon

WP_118171818.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:31592-32095:-1:exon

D1367_RS29980
type: Gene
subclass of: SO_0000704
RO_0002162: 446679
locus tag: D1367_RS29980
so part of: sequence
location: complement(32099..32554)
location: region:32099-32554:-1
so has part: feature:32099-32554:-1:exon
subclass of: SO_0000010

position:32099:-1
position: 32099
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:32554:-1
position: 32554
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:32099-32554:-1:exon

D1367_RS29980
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 446679
locus tag: D1367_RS29980
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MSDNVLNQLRNKRNRPTVTPRQDALLRREQPQAQPQEQNSLPQPTIVTELANSTAERGDTLAELKAELEKYPQTRRHSAIVLEKDLDQELTRFCKELGITVEVFLEAAWTVASTDNALTEKITTEAKRRYDQRKRVGQIKRLITMLTNPSK
SIO_010081: D1367_RS29980
subclass of: SO_0000673
so part of: D1367_RS29980
location: complement(32099..32554)
location: region:32099-32554:-1
so has part: feature:32099-32554:-1:exon

WP_118171819.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:32099-32554:-1:exon

D1367_RS29985
type: Gene
subclass of: SO_0000704
RO_0002162: 446679
locus tag: D1367_RS29985
so part of: sequence
location: complement(32557..33183)
location: region:32557-33183:-1
so has part: feature:32557-33183:-1:exon
subclass of: SO_0000010

position:32557:-1
position: 32557
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:33183:-1
position: 33183
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:32557-33183:-1:exon

D1367_RS29985
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 446679
locus tag: D1367_RS29985
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013325575.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ParA family protein
translation: MSPNQPTLLEFLKKTVALLDCIYPTQDNDNLFLIPADDQLDTVQDYLSNSGVGATLLKRRLEAIRQIFQVCIIDAPPQRSQICLTVIGAADFLIIPAEASVKGYGSLVRTLDLLSGLRDVGATNASILGVLPFRDRWFGNTQAQESRAAVDGMRDEVGEKLVLPSIRESERYKQAINKRTTLSQLGYTDLEYPFEILIDKIRASVGSK
SIO_010081: D1367_RS29985
subclass of: SO_0000673
so part of: D1367_RS29985
location: complement(32557..33183)
location: region:32557-33183:-1
so has part: feature:32557-33183:-1:exon

WP_244945042.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:32557-33183:-1:exon

D1367_RS33035
type: Gene
subclass of: SO_0000704
RO_0002162: 446679
locus tag: D1367_RS33035
so part of: sequence
location: 33285..33680
location: region:33285-33680:1
so has part: feature:33285-33680:1:exon
subclass of: SO_0000010

position:33285:1
position: 33285
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:33680:1
position: 33680
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:33285-33680:1:exon

D1367_RS33035
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 446679
locus tag: D1367_RS33035
inference: COORDINATES: protein motif:HMM:NF025080.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: transposase
translation: MIRPTRRSLPKQFRFEQPKSPPVVVNFQGGQVTSDAGLSLIAEIDRKLQITSQFAECFQDYRKQNRIDHTVESLITQRIYGLVMGYEDLNDHEELRHDPMFAIALQKRIGIENEAFVLAPKLYIKSSRTLS
SIO_010081: D1367_RS33035
subclass of: SO_0000673
so part of: D1367_RS33035
location: 33285..33680
location: region:33285-33680:1
so has part: feature:33285-33680:1:exon

WP_267256048.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:33285-33680:1:exon

D1367_RS29990
type: Gene
subclass of: SO_0000704
RO_0002162: 446679
locus tag: D1367_RS29990
pseudo: true
so part of: sequence
location: <33709..34773
location: region:33709-34773:1
so has part: feature:33709-34773:1:exon
subclass of: SO_0000010

position:33709:1
position: 33709
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

position:34773:1
position: 34773
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:33709-34773:1:exon

D1367_RS29990
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 446679
locus tag: D1367_RS29990
inference: COORDINATES: protein motif:HMM:NF025080.2
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: IS1380 family transposase
SIO_010081: D1367_RS29990
subclass of: SO_0000673
so part of: D1367_RS29990
location: <33709..34773
location: region:33709-34773:1
so has part: feature:33709-34773:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:33709-34773:1:exon

D1367_RS32565
type: Gene
subclass of: SO_0000704
RO_0002162: 446679
locus tag: D1367_RS32565
so part of: sequence
location: complement(35016..35753)
location: region:35016-35753:-1
so has part: feature:35016-35753:-1:exon
subclass of: SO_0000010

position:35016:-1
position: 35016
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:35753:-1
position: 35753
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:35016-35753:-1:exon

D1367_RS32565
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 446679
locus tag: D1367_RS32565
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MMLTQAATDIPQTQNITCKQPLGIPGNATQTIYPYSQTQWVIRYEWADYIKEKGKDKSFRQWHRLPDGTPEMRKGDEPWKAYRIDEALACAKSVTGTPALLQHEGEGCVEVGRAHGLAGITFVGSGWDKKTITPEYQRVKDSGIGLIVFLHDADDTGLKKLQTCQDCAAEVGIAFIGINPHDICPDLPYKSSDIKEILGQMETPEFIRALEQEIHAAVAERSQLAELKNTDNSSNDEDARISHKQ
SIO_010081: D1367_RS32565
subclass of: SO_0000673
so part of: D1367_RS32565
location: complement(35016..35753)
location: region:35016-35753:-1
so has part: feature:35016-35753:-1:exon

WP_244945043.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:35016-35753:-1:exon