Nostoc sphaeroides strain Kutzing En plasmid p3, complete sequence.
type: Entry
definition: Nostoc sphaeroides strain Kutzing En plasmid p3, complete sequence.
sequence version: NZ_CP031944.1
sequence date: 2023-03-25
sequence: sequence
division: CON
label: NZ_CP031944.1
type: RefSeq
SIO_000068: refseq
dblink: PRJNA224116
dblink: SAMN09925536
keyword: RefSeq
source: Nostoc sphaeroides
organism: Nostoc sphaeroides
taxonomy: Bacteria; Cyanobacteriota; Cyanophyceae; Nostocales; Nostocaceae; Nostoc.
reference: 1
reference: 2
comment: REFSEQ INFORMATION: The reference sequence is identical to\nCP031944.1.\nBacteria and source DNA available from Cheng Chao, Hubei University\nfor Nationalities China.\nThe annotation was added by the NCBI Prokaryotic Genome Annotation\nPipeline (PGAP). Information about PGAP can be found here:\nhttps://www.ncbi.nlm.nih.gov/genome/annotation_prok/\nThis genome has a base modification file available.\n\n##Genome-Assembly-Data-START##\nAssembly Method :: HGAP v. Oct-2013\nAssembly Name :: HBEN_NSP_1.0\nGenome Representation :: Full\nExpected Final Version :: Yes\nGenome Coverage :: 168.0x\nSequencing Technology :: PacBio\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI RefSeq\nAnnotation Date :: 03/25/2023 00:12:53\nAnnotation Pipeline :: NCBI Prokaryotic Genome\n Annotation Pipeline (PGAP)\nAnnotation Method :: Best-placed reference protein\n set; GeneMarkS-2+\nAnnotation Software revision :: 6.4\nFeatures Annotated :: Gene; CDS; rRNA; tRNA; ncRNA\nGenes (total) :: 6,093\nCDSs (total) :: 6,005\nGenes (coding) :: 5,761\nCDSs (with protein) :: 5,761\nGenes (RNA) :: 88\nrRNAs :: 4, 4, 4 (5S, 16S, 23S)\ncomplete rRNAs :: 4, 4, 4 (5S, 16S, 23S)\ntRNAs :: 72\nncRNAs :: 4\nPseudo Genes (total) :: 244\nCDSs (without protein) :: 244\nPseudo Genes (ambiguous residues) :: 0 of 244\nPseudo Genes (frameshifted) :: 83 of 244\nPseudo Genes (incomplete) :: 168 of 244\nPseudo Genes (internal stop) :: 36 of 244\nPseudo Genes (multiple problems) :: 37 of 244\nCRISPR Arrays :: 3\n##Genome-Annotation-Data-END##\nCOMPLETENESS: full length.

sequence
subclass of: SO_0000155
sequence length: 34411
topology: circular
so has quality: SO_0000988
location: 1..34411
location: region:1-34411:1
RO_0002162: 446679

NZ_CP031944
type: RefSeq
SIO_000068: refseq

PRJNA224116
type: BioProject
SIO_000068: bioproject

SAMN09925536
type: BioSample
SIO_000068: biosample

1
title: Evidence for the Nostoc sphaeroides, a unique species of cyanobacteria with high nutritional and medicinal value: from a genomic perspective
author: Wang, Q.
author: Cheng, C.
journal: Unpublished

2
title: Direct Submission
author: Cheng, C.
author: Li, W.
author: Wang, Q.
author: Fang, Q.
journal: Submitted (28-AUG-2018) Key Laboratory of Biological Resources Protection and Utilization of Hubei Province, Hubei University for Nationalities, 39 Xueyuan Road, Enshi 445000, China

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:34411:1
position: 34411
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-34411:1:source
so part of: sequence
organism: Nostoc sphaeroides
mol type: genomic DNA
strain: Kutzing En
isolation source: water
plasmid: p3
country: China: Enshi
collection date: 2018-06

446679
type: Taxonomy
SIO_000068: taxonomy

D1367_RS29630
type: Gene
subclass of: SO_0000704
RO_0002162: 446679
locus tag: D1367_RS29630
so part of: sequence
location: complement(join(33525..34411,1..820))
location: region:1-34411:-1
so has part: feature:1-820:-1:exon
so has part: feature:33525-34411:-1:exon
subclass of: SO_0000010

position:1:-1
position: 1
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:34411:-1
position: 34411
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1-820:-1:exon

position:820:-1
position: 820
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:33525-34411:-1:exon

position:33525:-1
position: 33525
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

D1367_RS29630
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 446679
locus tag: D1367_RS29630
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: serine protease
translation: MKNSFRILYHFSIAYNKSKSTGLVKYFATQNQNLGVLKELQKLVLPNGFISLLFPLLIQGNFINSSRMNWMNRTLMIIIALACVYIPIIQLPKQAIALPSLTKTKSSPPENALSDQQEIHSIAQKITVRVLPEKSPEDGASGILIEKQERTHGQQLIYLYLVLTNDHVLEILKKRAKDLGGGYQVQTFDGQVHKALIYKVNFRGNDLGLLWFSSTNSYELPQRGQSKSLKEYDQVFVAGFPSEKKLGEEAFTLTSGWVTTSSILSGKPLDAGYQLAFSNQTSDGMSGGAVLDKAGRLVGVNGRGKNQQQIFLSGDYNLGNSNPYAYFGGKDEPSVETQKLMRHFAWGIPIETYTQLAPQKPFNRLQPQLSTVDPQPTQTSITIPSLKLRSSPPTVIDYPNSIILVLRIILFLIFIFFLALLIIYLLTFTIIKSGFFGVQHNHLNTTPEHDNSTLQEPVITVDPTDELHPNIPKIAKLIINNSERTVKILLDKNILLLNGKQSEANIQISGNPQIEIRIKIPKWGTIIPIVKDSEIYKFDVKKAEDKKFNGSDEVYWDLYKIENGEESS
SIO_010081: D1367_RS29630
subclass of: SO_0000673
so part of: D1367_RS29630
location: complement(join(33525..34411,1..820))
location: region:1-34411:-1
so has part: feature:1-820:-1:exon
so has part: feature:33525-34411:-1:exon

WP_118171792.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1-820:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:33525-34411:-1:exon

D1367_RS29635
type: Gene
subclass of: SO_0000704
RO_0002162: 446679
locus tag: D1367_RS29635
so part of: sequence
location: complement(1324..1860)
location: region:1324-1860:-1
so has part: feature:1324-1860:-1:exon
subclass of: SO_0000010

position:1324:-1
position: 1324
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1860:-1
position: 1860
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1324-1860:-1:exon

D1367_RS29635
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 446679
locus tag: D1367_RS29635
inference: COORDINATES: protein motif:HMM:NF025579.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: COP23 domain-containing protein
translation: MKVNLGICALLTSVLAMGYIAVASTPVKAESIRFSCEKNRNGTPTTFAITSTGQREFIRWVEDRFTLAGYPPERRCQQVTNRINQYIVSGYPRYITHGILNNQPVVCVTDRTGGGCTGLLYTLKPGQDGQETVRQLLQLNKENFKNDPRIEGRSCRTYVEIKALLRGELKTAEVACKI
SIO_010081: D1367_RS29635
subclass of: SO_0000673
so part of: D1367_RS29635
location: complement(1324..1860)
location: region:1324-1860:-1
so has part: feature:1324-1860:-1:exon

WP_118171762.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1324-1860:-1:exon

D1367_RS29640
type: Gene
subclass of: SO_0000704
RO_0002162: 446679
locus tag: D1367_RS29640
so part of: sequence
location: complement(2064..3176)
location: region:2064-3176:-1
so has part: feature:2064-3176:-1:exon
subclass of: SO_0000010

position:2064:-1
position: 2064
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3176:-1
position: 3176
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2064-3176:-1:exon

D1367_RS29640
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 446679
locus tag: D1367_RS29640
EC number: 2.7.11.1
inference: COORDINATES: protein motif:HMM:NF012298.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: serine/threonine-protein kinase
translation: MGLIVGNIVGGHYKVIRTLGSGNFGETYLAEDLYARNRKCAVKRFNFASNDPDTFNKAKELFQREAKVLFDLSNPLRNDRIPQFFADFDDNKEFYLVQEFIEGHNLGQELQKITKLEEDKVVDLLEEVLEILKFIHSKKIIHRDIKPENLMRRVPDNKIVLIDFGAVKEVVAQSANTTLGKKPTRIYTEDYAPREQRQGKPRLNSDIYALGITALQALAGLDIEHLKDTKTGEVIWGSQIQVSKGLEKILKRMVHEDYNRRYQLADDVLHAIKKYKKQYKKTWILSPGNSQPLTRQQPTRLVTTIPLRWRFVVGMIGMVTVFTISFVVFRTVTTKSPNSTVSPDSTTTKSPPKSRGNCPPFIAPGDDCLP
SIO_010081: D1367_RS29640
subclass of: SO_0000673
so part of: D1367_RS29640
location: complement(2064..3176)
location: region:2064-3176:-1
so has part: feature:2064-3176:-1:exon

WP_118171763.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2064-3176:-1:exon

D1367_RS29645
type: Gene
subclass of: SO_0000704
RO_0002162: 446679
locus tag: D1367_RS29645
so part of: sequence
location: complement(3605..3865)
location: region:3605-3865:-1
so has part: feature:3605-3865:-1:exon
subclass of: SO_0000010

position:3605:-1
position: 3605
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3865:-1
position: 3865
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3605-3865:-1:exon

D1367_RS29645
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 446679
locus tag: D1367_RS29645
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010994168.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MDSPPSNTRHEEEIEVLIAEIQNLTQKNAALMERTAIAFSQVELELLRNRILSELKLGKQAPGYKAIQKALNRFIAELTYPNKSIF
SIO_010081: D1367_RS29645
subclass of: SO_0000673
so part of: D1367_RS29645
location: complement(3605..3865)
location: region:3605-3865:-1
so has part: feature:3605-3865:-1:exon

WP_118171764.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3605-3865:-1:exon

D1367_RS29650
type: Gene
subclass of: SO_0000704
RO_0002162: 446679
locus tag: D1367_RS29650
so part of: sequence
location: 4489..5565
location: region:4489-5565:1
so has part: feature:4489-5565:1:exon
subclass of: SO_0000010

position:4489:1
position: 4489
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5565:1
position: 5565
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4489-5565:1:exon

D1367_RS29650
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 446679
locus tag: D1367_RS29650
EC number: 2.7.11.1
inference: COORDINATES: protein motif:HMM:NF012298.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: serine/threonine-protein kinase
translation: MPLKNGQILNNKYRILGHINNDSEGERTFSSTYKAENIQSKQYVVIKTPKSGIHFHKRFLEKEIPILKRVSNNNEHIVSFLDDFFIDGQPYLVMQFIEGKTLEKYVQETRIELTNNQNFEEALEYIRQIGRALIKLHNQNPTIVHRDIKPDNIMLQKIQDPYDNKTKYKAILIDFGIAGRSDLIGIKPTNLGSGNYAPYEQKIPGECPYKQKFANECNMSVTEILDKNKCVDKHNLSTKCKLATYLKPTLDIYSLAATLYFVIKKEPPPDSISRSANDNLAKEIYKNIYLANQEQAKLYIALYKGMEFEADTRCQRMEDWINMLEPNSSINKWAFFISVAVNYVKKLFKYVKKLVKSI
SIO_010081: D1367_RS29650
subclass of: SO_0000673
so part of: D1367_RS29650
location: 4489..5565
location: region:4489-5565:1
so has part: feature:4489-5565:1:exon

WP_118171765.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4489-5565:1:exon

D1367_RS29655
type: Gene
subclass of: SO_0000704
RO_0002162: 446679
locus tag: D1367_RS29655
so part of: sequence
location: 5754..9215
location: region:5754-9215:1
so has part: feature:5754-9215:1:exon
subclass of: SO_0000010

position:5754:1
position: 5754
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9215:1
position: 9215
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5754-9215:1:exon

D1367_RS29655
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 446679
locus tag: D1367_RS29655
inference: COORDINATES: protein motif:HMM:NF013124.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: tetratricopeptide repeat protein
translation: MTKLNLANTMHLLLLNGALLISGTVVASTIAGISGKASYRKAIGKLAGSIAASKLDDITANLCKENDTELKEDLQRAVGLATAVTIQAYAEDNSFPAYTRAIHKLAKNAGEYWQFIDTLQDSESQATTEIEKSQITEIFSTDVSDFIKVTALEPDAWQSFLEQLSQESGVVIPSYITANIAFALYSTFPKALRELLKDDFEKGGKTFASLYLSVLDSFKEIKSSLSNERIKKTAFYLGDIEWDLTSIENWNKIVFDKNIETNKHRKQLLNNLDKSVRNVADDSLKEIGREEPYKIVEHFNQIKEQLYFIGRQIEAFATANTLITLALDVNSSFQEALQQIDLQSLRMSDLLSDVYPSAQTKQVQKLAELLDRIDLRKIQPAYEVIPEPPRNLTIDTVLACPKHWQGRFSELEQLRAWLKDENTKIICIQGIGGIGKSTLANKIYTETTEFDRKLWVGVSEKTCFNDLAMQALIILSKYPERIRKIHEDQLVKYLTDSMRNSKFLLVIDNLEALLTLNGQWQDEYYQKFFESWANCMGASKILVTTRERPIDLDVKSCWLQLSGLSQQEGVALLQCLNIQASQEQLQDFTQQVKGHPLMLNLLAKFLKKKGINYLAKTHELDIPDLLGLLSDKETTINYERKPNIQNLSELEDSFNRLTSKLQSLLLNLSVYHDAFNLVDAAALLPKQKVSEQDLKELEKAKFLYKDNANGKWKFRYPFILTYSQLKAGELTDIHELAVNHYKLHAKPPSCWNKLDDLKEHLEIFYHRCQQKEYGLAFDVLHECDSFLYSRGYNIDREKYYQQLVQMWQPCKSEEKQKFLLCFYALADAYSSTGKYQEAIKCYQSTLDVAREIDHSLKEAQALNNLASVYTRLAQYYLAIDYHQQSLKMFRGLKDKLEEEAASLSNLGNAYYCLGQFEMTIKYNQQSLDIARQIKDSLGEASALNNLGNVYYSLREYQRAHQSYYEALNLLHKNQDIQKEITFRNNLGCTYNVSKKYKKAIYCHEESLKNAQMIGDRWEEATSLSNLGNVHADLKEYEKAIENYQKCLKIAKEIDAPQLEANALSGLGNVYSFQKKYHIAIDYHQQSFEIKQKICDRYGEAKQLHYLATAYLQKGDVKGFSLQKQVKLILQELELPIDFFGSVLWLAVRHRVKA
SIO_010081: D1367_RS29655
subclass of: SO_0000673
so part of: D1367_RS29655
location: 5754..9215
location: region:5754-9215:1
so has part: feature:5754-9215:1:exon

WP_118171766.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:5754-9215:1:exon

D1367_RS32545
type: Gene
subclass of: SO_0000704
RO_0002162: 446679
locus tag: D1367_RS32545
pseudo: true
so part of: sequence
location: <9350..>9508
location: region:9350-9508:1
so has part: feature:9350-9508:1:exon
subclass of: SO_0000010

position:9350:1
position: 9350
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

position:9508:1
position: 9508
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9350-9508:1:exon

D1367_RS32545
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 446679
locus tag: D1367_RS32545
inference: COORDINATES: similar to AA sequence:RefSeq:WP_009630228.1
GO function: GO:0003677 - DNA binding [Evidence IEA]
GO process: GO:0015074 - DNA integration [Evidence IEA]; GO:0006310 - DNA recombination [Evidence IEA]
note: internal stop; incomplete; partial in the middle of a contig; missing N-terminus and C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: tyrosine-type recombinase/integrase
SIO_010081: D1367_RS32545
subclass of: SO_0000673
so part of: D1367_RS32545
location: <9350..>9508
location: region:9350-9508:1
so has part: feature:9350-9508:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:9350-9508:1:exon

D1367_RS29665
type: Gene
subclass of: SO_0000704
RO_0002162: 446679
locus tag: D1367_RS29665
so part of: sequence
location: complement(9500..10591)
location: region:9500-10591:-1
so has part: feature:9500-10591:-1:exon
subclass of: SO_0000010

position:9500:-1
position: 9500
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:10591:-1
position: 10591
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9500-10591:-1:exon

D1367_RS29665
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 446679
locus tag: D1367_RS29665
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015118917.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: patatin-like phospholipase family protein
translation: MSYKVKVLSIDGGGIRGIIPAIVLNEIEKITQKPIYQLFDLIAGTSTGGILALGLTSSDPDNPGQPFTSEKLIDLYKKQGEVIFKRRQRTSKPILKFLLKQFGLPVTEPQDLFSSKYTSQLKRQTLESYFSKTTYIRDALTEVVITSYDTVLRRPIFFTSNVKKEKKAENYYKICKGCTVFDAAMATSAAPTFFKPYQLSVPNDKKTYILIDGGIFANNPTTLAIIEAMVSYHIKTGERLKLDEILVVSLGTGLQIREFLYKDISEWGILQWTQPFINMALDGQSEVVACQLEQLLSISNLQPKQYYRFQPSMSERIDYVPQQPKEDMDDSTQENITALEGLANKLIDIIKDDLKELSIQLLS
SIO_010081: D1367_RS29665
subclass of: SO_0000673
so part of: D1367_RS29665
location: complement(9500..10591)
location: region:9500-10591:-1
so has part: feature:9500-10591:-1:exon

WP_118171767.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:9500-10591:-1:exon

D1367_RS29670
type: Gene
subclass of: SO_0000704
RO_0002162: 446679
locus tag: D1367_RS29670
so part of: sequence
location: complement(10928..11908)
location: region:10928-11908:-1
so has part: feature:10928-11908:-1:exon
subclass of: SO_0000010

position:10928:-1
position: 10928
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:11908:-1
position: 11908
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:10928-11908:-1:exon

D1367_RS29670
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 446679
locus tag: D1367_RS29670
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013325789.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: site-specific integrase
translation: MNTRAIANNFNPESLALTEPVPLTMHPAEVYLNSLGSGSRRTMREALNAISQLLTNGSCDASTLDWSKLRYQHTAAVRSVLMEKYSPAMANKMLCALRRTLKEAWRLGLMSTDEYGRAADIESVRGQSLLKGRELDPEEIAALWSDCIQDDSTLGRRDAALLAVLTVGLRRSEVTYLDLSDFKPRTRSLTIREAKGRKERIVYLPEAGVQAVLDWLLIRGKAPGALFYPLNKANKIIPRRMSEQGVLRALQRRGEKADVEAFTPHDFRRTFIGNLLDAGADIVTIAKLAGHASPSTTSKYDRRGEAAKKRAIDLLNVPYRKRDKRN
SIO_010081: D1367_RS29670
subclass of: SO_0000673
so part of: D1367_RS29670
location: complement(10928..11908)
location: region:10928-11908:-1
so has part: feature:10928-11908:-1:exon

WP_118171768.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:10928-11908:-1:exon

D1367_RS29675
type: Gene
subclass of: SO_0000704
RO_0002162: 446679
locus tag: D1367_RS29675
so part of: sequence
location: complement(12073..12492)
location: region:12073-12492:-1
so has part: feature:12073-12492:-1:exon
subclass of: SO_0000010

position:12073:-1
position: 12073
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:12492:-1
position: 12492
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:12073-12492:-1:exon

D1367_RS29675
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 446679
locus tag: D1367_RS29675
inference: COORDINATES: similar to AA sequence:RefSeq:WP_019488174.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MNILDEIRNRAVAPTVAPREDVLAPQQQGSPTPDMPSTADSSVSELTLLEEQLRNLPEIAPRVPVRLEMAIKQELDELCNQEKITVETLLEAFYVTCQDKDTVMKQVLKEAKKRLKSRKEAGNIRSSITRLANLAKKLK
SIO_010081: D1367_RS29675
subclass of: SO_0000673
so part of: D1367_RS29675
location: complement(12073..12492)
location: region:12073-12492:-1
so has part: feature:12073-12492:-1:exon

WP_118171769.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:12073-12492:-1:exon

D1367_RS29680
type: Gene
subclass of: SO_0000704
RO_0002162: 446679
locus tag: D1367_RS29680
so part of: sequence
location: complement(12517..13368)
location: region:12517-13368:-1
so has part: feature:12517-13368:-1:exon
subclass of: SO_0000010

position:12517:-1
position: 12517
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:13368:-1
position: 13368
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:12517-13368:-1:exon

D1367_RS29680
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 446679
locus tag: D1367_RS29680
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015214252.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ParA family protein
translation: MPNPPTVVSLGLAGGQGKSTVALMLGRYLGRLGIPVLFVDCDPQSSLTSFLGVQVQPDTPTLLEVLTQPEEKTKILDAIASVPDVKLGDRTINNTNLFLIPSDDGLESANYKLASSGLSLFILRNRLQPIVSNFGVAIVDPPPERSHLAQTSLGAGDRWVIPAESNVKGVQSLLRTMELIKEFFAALPYGELLGIVPFRARWTGLHPTTATKTSIDTMRQLVGSELMLPHILESDVFKNAINQRVAPTDLGQPNLEYAIHVLAQRLKPALPEEYAKLIPLEPV
SIO_010081: D1367_RS29680
subclass of: SO_0000673
so part of: D1367_RS29680
location: complement(12517..13368)
location: region:12517-13368:-1
so has part: feature:12517-13368:-1:exon

WP_118171770.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:12517-13368:-1:exon

D1367_RS29685
type: Gene
subclass of: SO_0000704
RO_0002162: 446679
locus tag: D1367_RS29685
so part of: sequence
location: 13581..13901
location: region:13581-13901:1
so has part: feature:13581-13901:1:exon
subclass of: SO_0000010

position:13581:1
position: 13581
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:13901:1
position: 13901
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:13581-13901:1:exon

D1367_RS29685
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 446679
locus tag: D1367_RS29685
inference: COORDINATES: similar to AA sequence:RefSeq:WP_019488194.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MTEAKSTRTVHRGRIFPEIQWTEEQKAKRRAERSDFHQRSQVIFDRVKPEYIQTHYNWYMVVEPESGNYFIDRDEEVAMLLARQKHPGTVPLFLFRINETGVSGTI
SIO_010081: D1367_RS29685
subclass of: SO_0000673
so part of: D1367_RS29685
location: 13581..13901
location: region:13581-13901:1
so has part: feature:13581-13901:1:exon

WP_118171771.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:13581-13901:1:exon

D1367_RS29690
type: Gene
subclass of: SO_0000704
RO_0002162: 446679
locus tag: D1367_RS29690
so part of: sequence
location: 13898..14260
location: region:13898-14260:1
so has part: feature:13898-14260:1:exon
subclass of: SO_0000010

position:13898:1
position: 13898
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:14260:1
position: 14260
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:13898-14260:1:exon

D1367_RS29690
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 446679
locus tag: D1367_RS29690
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017742143.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: aspartyl protease
translation: MIHGLFGNDDELVFEIELIGADGLELPVDVILDTGFSGWLAIDEQDLQGLDWIYVQTRALRTARGEADFNIYAGLVRIDGQTFDIPVHVGEGVSEVLLGRQWLKTRRLVVDMPSLVLTLG
SIO_010081: D1367_RS29690
subclass of: SO_0000673
so part of: D1367_RS29690
location: 13898..14260
location: region:13898-14260:1
so has part: feature:13898-14260:1:exon

WP_118171772.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:13898-14260:1:exon

D1367_RS29695
type: Gene
subclass of: SO_0000704
RO_0002162: 446679
locus tag: D1367_RS29695
so part of: sequence
location: complement(14423..15349)
location: region:14423-15349:-1
so has part: feature:14423-15349:-1:exon
subclass of: SO_0000010

position:14423:-1
position: 14423
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:15349:-1
position: 15349
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:14423-15349:-1:exon

D1367_RS29695
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 446679
locus tag: D1367_RS29695
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015207858.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MASAEFTSSESTQAVPTVETPTDEEQVNVDTSTSTEIESPAAIFQAVGVITGSVNFTTDGQSTVTIGSYEYPLYYSKRQWDVLNALKKEIENTGNQNQRLVVYPKAIHFPRREQPHRLAFQLVGFDRGRKLDAVSGELEDLEFKLSGLWQFIPVCSTPCISVFRNFSNERLEFIKQAEPARKVKFMKASHIPLLWKDAPINPFRFNPKLEKEQQGRAVFVTCKAKFLPGRDVFGFVALTALPQEAAPRFLKASKTDKATVQLAAKKAQRAAAPPAPKKGKSKATSQDNTSVPRTKPLPKPKPKLKTGE
SIO_010081: D1367_RS29695
subclass of: SO_0000673
so part of: D1367_RS29695
location: complement(14423..15349)
location: region:14423-15349:-1
so has part: feature:14423-15349:-1:exon

WP_118171773.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:14423-15349:-1:exon

D1367_RS32550
type: Gene
subclass of: SO_0000704
RO_0002162: 446679
locus tag: D1367_RS32550
so part of: sequence
location: complement(15449..16267)
location: region:15449-16267:-1
so has part: feature:15449-16267:-1:exon
subclass of: SO_0000010

position:15449:-1
position: 15449
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:16267:-1
position: 16267
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:15449-16267:-1:exon

D1367_RS32550
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 446679
locus tag: D1367_RS32550
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MAELPAINTSPLIFLTKGGFLDLLLLISPSIIVNGKRVYLWIKPDDRTPGGDSTQTLTQPTLESITQSETQLGDGTGIGQAQSYIQQELQPIVPSCPILLDKTFSNLDSTGETTQHTSNLESLVLDGTEWDSPELEKPLTLAPSDLEACPIPVSQPLVFESSDRESLNSEGKEVEKTDYVESLGKTPSTPSPQPSLSVTTRQPVRGDRVRLISNGEEYKISWVSCGSDKVLLVCARTGEPLTAASKLRPGAAAGGLNLIDVSELEFLEQWGN
SIO_010081: D1367_RS32550
subclass of: SO_0000673
so part of: D1367_RS32550
location: complement(15449..16267)
location: region:15449-16267:-1
so has part: feature:15449-16267:-1:exon

WP_244945041.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:15449-16267:-1:exon

D1367_RS29705
type: Gene
subclass of: SO_0000704
RO_0002162: 446679
locus tag: D1367_RS29705
so part of: sequence
location: complement(16260..16511)
location: region:16260-16511:-1
so has part: feature:16260-16511:-1:exon
subclass of: SO_0000010

position:16260:-1
position: 16260
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:16511:-1
position: 16511
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:16260-16511:-1:exon

D1367_RS29705
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 446679
locus tag: D1367_RS29705
inference: COORDINATES: similar to AA sequence:RefSeq:WP_009454344.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: UPF0175 family protein
translation: MSNVTINLPESVFSARRLSPEEFVRDMRLAAAIYWYQKQEISMEKAANVAGLNRRDFLAVLAREQVDVFAVDFDDLQSELNRG
SIO_010081: D1367_RS29705
subclass of: SO_0000673
so part of: D1367_RS29705
location: complement(16260..16511)
location: region:16260-16511:-1
so has part: feature:16260-16511:-1:exon

WP_118171774.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:16260-16511:-1:exon

D1367_RS29710
type: Gene
subclass of: SO_0000704
RO_0002162: 446679
locus tag: D1367_RS29710
so part of: sequence
location: 17008..17598
location: region:17008-17598:1
so has part: feature:17008-17598:1:exon
subclass of: SO_0000010

position:17008:1
position: 17008
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:17598:1
position: 17598
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:17008-17598:1:exon

D1367_RS29710
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 446679
locus tag: D1367_RS29710
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015214272.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MATKDWLDNHAKVTAYLDFSLYASLEKWMKTHKIKKASQALTIILEHYLEGNIPIEVMPENLELEVKQLKVKTTEIDSLEATVAEQQREFNDEINSLRTEIDGLRQALINAGLSSLREKVEDIPRGKIKFSYSDHDAKQGLTKTDLCERININGSQINQWATMLNLDPDEYLFELTGWKKPLQARRYFPVLENDQK
SIO_010081: D1367_RS29710
subclass of: SO_0000673
so part of: D1367_RS29710
location: 17008..17598
location: region:17008-17598:1
so has part: feature:17008-17598:1:exon

WP_118171775.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:17008-17598:1:exon

D1367_RS29715
type: Gene
subclass of: SO_0000704
RO_0002162: 446679
locus tag: D1367_RS29715
so part of: sequence
location: complement(17730..19190)
location: region:17730-19190:-1
so has part: feature:17730-19190:-1:exon
subclass of: SO_0000010

position:17730:-1
position: 17730
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:19190:-1
position: 19190
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:17730-19190:-1:exon

D1367_RS29715
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 446679
locus tag: D1367_RS29715
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MKQGVFELALAGVCGVAAIIGLATSQTRQPYDLTQIQFCPRSANGVHSQIALDKRFCNQPRFVLTEEWQRYGLYGSIIPYKGDAIQWVRDLPTDNPNQLLGYGIAVIGLWGVVGCLLVRSQRLKRTDYELGELEKTGDYATWHQNKHKREIKQHSTQLYTERLKDGLTDLDVHSRKELGLTDEENERAKARIQLEDFMKARAVNHSVMDKTIAENLRDRAKADQERGKIEGKTKGAIASSDNQQSVDQQRATELIEALKAHESGWLWKIIDNLTPLWLIGRQGSGKTYTSAAIALVRKHCLGIPIYYLIDRHATGDNSKAWRYLDTQNIAESETEIGTALDSLCEHWLLRIKGKNDLEQPAKITPEQVLIDEYTNLKSLIGEPAEKFYKLHLTDTRKAKVHVTGITHNDTNSSYPEGTQAMREAGTILIQKFSANGKTPLSRVKIVRGLLDDNGEEYLDAERTLPSWFNPESIYNHFNGKPIDFDA
SIO_010081: D1367_RS29715
subclass of: SO_0000673
so part of: D1367_RS29715
location: complement(17730..19190)
location: region:17730-19190:-1
so has part: feature:17730-19190:-1:exon

WP_118171776.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:17730-19190:-1:exon

D1367_RS29720
type: Gene
subclass of: SO_0000704
RO_0002162: 446679
locus tag: D1367_RS29720
so part of: sequence
location: complement(19187..19756)
location: region:19187-19756:-1
so has part: feature:19187-19756:-1:exon
subclass of: SO_0000010

position:19187:-1
position: 19187
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:19756:-1
position: 19756
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:19187-19756:-1:exon

D1367_RS29720
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 446679
locus tag: D1367_RS29720
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MTYDIEESQEELVSEIAPDTPLPKDLISHLESRKQHRKDVINTTEKLTRFFVGWSLNSTGFFIAKYLLITGGSVNLWLAISLSFSICSVGSLAGLTGLRVNYNSDGLEVDNMQNVFKTAGGLVFAGITTWLAVKDHQYFENLTKETVTQISQDIQTIEKQNPQSDPWLSIAVALALFIGSIAIIFKGRE
SIO_010081: D1367_RS29720
subclass of: SO_0000673
so part of: D1367_RS29720
location: complement(19187..19756)
location: region:19187-19756:-1
so has part: feature:19187-19756:-1:exon

WP_118171777.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:19187-19756:-1:exon

D1367_RS29725
type: Gene
subclass of: SO_0000704
RO_0002162: 446679
locus tag: D1367_RS29725
so part of: sequence
location: complement(19821..20474)
location: region:19821-20474:-1
so has part: feature:19821-20474:-1:exon
subclass of: SO_0000010

position:19821:-1
position: 19821
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:20474:-1
position: 20474
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:19821-20474:-1:exon

D1367_RS29725
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 446679
locus tag: D1367_RS29725
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MKSSMKLKNLVTSKSRHLERQLKTKFNTSTNLVVRALTGDKSALKLIGQMGNDGAKISEFAPQVREQMLAAIKGTEDLNVVLSDIYKQAGVSGEKIERAVQSAILADTHLANILEEMKLDFTSSKEKEALRHQQATDHLLLKAWVDKHMMQVDGEYKMLQTELQTDIRQQTIDLQHDREVGKYYLEMGDNARDDFKPKKQYAGRSIVQKIKDALLGF
SIO_010081: D1367_RS29725
subclass of: SO_0000673
so part of: D1367_RS29725
location: complement(19821..20474)
location: region:19821-20474:-1
so has part: feature:19821-20474:-1:exon

WP_181985247.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:19821-20474:-1:exon

D1367_RS29730
type: Gene
subclass of: SO_0000704
RO_0002162: 446679
locus tag: D1367_RS29730
so part of: sequence
location: complement(20723..21391)
location: region:20723-21391:-1
so has part: feature:20723-21391:-1:exon
subclass of: SO_0000010

position:20723:-1
position: 20723
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:21391:-1
position: 21391
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:20723-21391:-1:exon

D1367_RS29730
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 446679
locus tag: D1367_RS29730
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MSDKFTNNVRARLYKQGYQGFTKDDYTSAAIAVECDDLDNPTKDQLSQAVDYLKVKATSQLSFVDELVEEKFLSQVEDAQADPELDKSQLTIAEPEINSITVTSSDKRSFVTAQSSALGFELTEQETLSIASEVDDTFTDYSQFISTVTAAIKNYVDQKFDVIEQSFETNAQDLREHVSNRASRLNQKVNNFSGDMKADMGVIRQNIKSTQFSILARLNAAQ
SIO_010081: D1367_RS29730
subclass of: SO_0000673
so part of: D1367_RS29730
location: complement(20723..21391)
location: region:20723-21391:-1
so has part: feature:20723-21391:-1:exon

WP_118171779.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:20723-21391:-1:exon

D1367_RS29735
type: Gene
subclass of: SO_0000704
RO_0002162: 446679
locus tag: D1367_RS29735
so part of: sequence
location: complement(21404..21913)
location: region:21404-21913:-1
so has part: feature:21404-21913:-1:exon
subclass of: SO_0000010

position:21404:-1
position: 21404
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:21913:-1
position: 21913
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:21404-21913:-1:exon

D1367_RS29735
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 446679
locus tag: D1367_RS29735
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MATKKYLAKYRQLRQIYERVLGKTISDETWYRVVSFLKQRFSLRVESESAETIVETFAGLKRRYGALSPTSEGFEERWQAFKHFYSSSGGYSGIEALSALANYLKINLDDVPSSTRYYWFSQVGLSYSAHSTYHSKDLALVAFVAAKWAINKRKQTMKSATIEVLTLAL
SIO_010081: D1367_RS29735
subclass of: SO_0000673
so part of: D1367_RS29735
location: complement(21404..21913)
location: region:21404-21913:-1
so has part: feature:21404-21913:-1:exon

WP_118171780.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:21404-21913:-1:exon

D1367_RS29745
type: Gene
subclass of: SO_0000704
RO_0002162: 446679
locus tag: D1367_RS29745
so part of: sequence
location: complement(22515..23072)
location: region:22515-23072:-1
so has part: feature:22515-23072:-1:exon
subclass of: SO_0000010

position:22515:-1
position: 22515
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:23072:-1
position: 23072
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:22515-23072:-1:exon

D1367_RS29745
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 446679
locus tag: D1367_RS29745
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MHINLRNLEAINELPLQRTMLNQNQLRRLEAIDRWLREIRDSEEFRQLEYSPDVMLGDAIQAVGELLDEHDPCDYKPTNFTDDQWHSYLEQKPVMHIRRVKNWREKINSFILNGASSVAIVSLVTTSFMVVGAIFCHGFDRIESSRGEEYQPTWIYNAKIFEGSAIRISCGLPGCKLDGCVCRGR
SIO_010081: D1367_RS29745
subclass of: SO_0000673
so part of: D1367_RS29745
location: complement(22515..23072)
location: region:22515-23072:-1
so has part: feature:22515-23072:-1:exon

WP_118171781.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:22515-23072:-1:exon

D1367_RS29750
type: Gene
subclass of: SO_0000704
RO_0002162: 446679
locus tag: D1367_RS29750
so part of: sequence
location: 23329..23565
location: region:23329-23565:1
so has part: feature:23329-23565:1:exon
subclass of: SO_0000010

position:23329:1
position: 23329
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:23565:1
position: 23565
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:23329-23565:1:exon

D1367_RS29750
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 446679
locus tag: D1367_RS29750
inference: COORDINATES: similar to AA sequence:RefSeq:WP_019496354.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: helix-turn-helix transcriptional regulator
translation: MPIRNKVKKFVDGLGITRYRFQKDTGIAPSTAYNLYDNPDWIPQVTALNKICDFYRVQPSELIYWVPPEEIKEDKEDR
SIO_010081: D1367_RS29750
subclass of: SO_0000673
so part of: D1367_RS29750
location: 23329..23565
location: region:23329-23565:1
so has part: feature:23329-23565:1:exon

WP_118171782.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:23329-23565:1:exon

D1367_RS29760
type: Gene
subclass of: SO_0000704
RO_0002162: 446679
locus tag: D1367_RS29760
so part of: sequence
location: 23875..24966
location: region:23875-24966:1
so has part: feature:23875-24966:1:exon
subclass of: SO_0000010

position:23875:1
position: 23875
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:24966:1
position: 24966
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:23875-24966:1:exon

D1367_RS29760
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 446679
locus tag: D1367_RS29760
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MNSQNVEQAHGYIVQDDRDDFNFIFVHKELDDFGLDPYSFRIYSRIVRRAGKGEAFESNKNMAIGCRMSEAQVKRSLKTLATHGLIIKESRPGTTCIYRVAPRRNWSKSIPIIKEFCTDSSHRPTPAQVAQNGGVGLTELGGRSDRARGVGLTELESNSLLSTSNKVNPSKSDGRKKKEEEGSKEINQEKALPDNHYAVKKEKISATNEQSTHEDLNSGAARENHSQILVFSDDPVKEVDFLLYYQTYQRSQNKDINSVAPYVAKVLSKNDEGSTEVLCLFEQWKGACRTLHRKINNFADDPAEVEKQRQRYDFPKWEARMHDHYYNMLLSEGLSKFCKHKVSAKWYEWASAKFPERFVDIPD
SIO_010081: D1367_RS29760
subclass of: SO_0000673
so part of: D1367_RS29760
location: 23875..24966
location: region:23875-24966:1
so has part: feature:23875-24966:1:exon

WP_118171784.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:23875-24966:1:exon

D1367_RS29765
type: Gene
subclass of: SO_0000704
RO_0002162: 446679
gene: dnaB
locus tag: D1367_RS29765
so part of: sequence
location: 25157..26569
location: region:25157-26569:1
so has part: feature:25157-26569:1:exon
subclass of: SO_0000010

position:25157:1
position: 25157
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:26569:1
position: 26569
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:25157-26569:1:exon

D1367_RS29765
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 446679
gene: dnaB
locus tag: D1367_RS29765
EC number: 3.6.4.12
inference: COORDINATES: similar to AA sequence:RefSeq:WP_016873813.1
GO function: GO:0003678 - DNA helicase activity [Evidence IEA]
GO process: GO:0006260 - DNA replication [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: replicative DNA helicase
translation: MYASDDNVIPFATTANKLPPQSIESEEAILGGILLDPAAIERVRDILKPHHFYISAHGRIYNAALRLNAQELPTDLLMITNYLADNSLLEIIGGRNKLASLVDRTVSAVNIDALAGLVVEKWKRRELGRLGSQAIELQHKSNEETPLEEAFSQLQDFIYELQRSSDTAGASHISDVIVDLFQDIEDRSQGKVLPGIPTGFYDLDAMTCGFNRNDLVIVAGRPAMGKSAFAAQIAFYLAKAYQFPVVVFSLEMSKLQIAMRALSGEAGIPSGYLKTGRISNKQWESLSQGIGTLSELPIYLDDRPDPSLSYIESECRKIMAQERRDLGLIVVDYLQLMDGNGGGNRNHEIEKLTRGLKRLAMKLQTPVMCLSQLSRAVENRNNKRPMLSDLRDSGGIEQDADKVIMLYRDEYYDTNTQDRGVAEIILAKNRDGATGTIQLLFDGHLTKFQNMVRSATLSGTPSQLAQSDWY
SIO_010081: D1367_RS29765
subclass of: SO_0000673
so part of: D1367_RS29765
location: 25157..26569
location: region:25157-26569:1
so has part: feature:25157-26569:1:exon

WP_118171785.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:25157-26569:1:exon

D1367_RS29770
type: Gene
subclass of: SO_0000704
RO_0002162: 446679
locus tag: D1367_RS29770
so part of: sequence
location: complement(26641..27384)
location: region:26641-27384:-1
so has part: feature:26641-27384:-1:exon
subclass of: SO_0000010

position:26641:-1
position: 26641
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:27384:-1
position: 27384
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:26641-27384:-1:exon

D1367_RS29770
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 446679
locus tag: D1367_RS29770
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012412830.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MSNNNNGNGNHSNPYSETADLVESSEQGEIKIALGRLYREFENFKQSQKTERERDRAELQAWAQTNLIQNQLLSKAMVTIEMLTGELKNQNLCWNEYEKNNEDLRQELTPLLTQLKNMPKSSATLESLEFKGLKSEVLQLKQNGNQLLNHTQNLTTAIQELKNSPPPKPITIEKEVYRAEPISKYGTMGLFTALFTLLIFFIFNQFIPVKISDDFNNYLQAIWQRTGYSNVKLQRVEKRLGTDRNQR
SIO_010081: D1367_RS29770
subclass of: SO_0000673
so part of: D1367_RS29770
location: complement(26641..27384)
location: region:26641-27384:-1
so has part: feature:26641-27384:-1:exon

WP_118171786.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:26641-27384:-1:exon

D1367_RS29775
type: Gene
subclass of: SO_0000704
RO_0002162: 446679
locus tag: D1367_RS29775
so part of: sequence
location: complement(27368..28192)
location: region:27368-28192:-1
so has part: feature:27368-28192:-1:exon
subclass of: SO_0000010

position:27368:-1
position: 27368
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:28192:-1
position: 28192
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:27368-28192:-1:exon

D1367_RS29775
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 446679
locus tag: D1367_RS29775
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012412829.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MKRIVMILGGKGGTGKTAFTRLLLDVMHSKGINYLAYDADTENPELYEYYQNFGSGVRLLNFLEVAEAKRFFTEIKAESPDSIIVDMPGASSNKTREIISKFGLFKIAGDLGYRVTLVTVLNLGYSVITSLKTMADFCGAQADYVIVKNLCWDKGSGFQRWENSKTSGAIAELKGIEIEMPELDYSTFDTLTEKGLPYSAATEENGFPFGDYLLVSGFLDQAKPELEKAGAYLGLQQPEPLVAAESSKTSTSKQTSITASTSGRGKKKTNEQQQ
SIO_010081: D1367_RS29775
subclass of: SO_0000673
so part of: D1367_RS29775
location: complement(27368..28192)
location: region:27368-28192:-1
so has part: feature:27368-28192:-1:exon

WP_118171787.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:27368-28192:-1:exon

D1367_RS29780
type: Gene
subclass of: SO_0000704
RO_0002162: 446679
locus tag: D1367_RS29780
so part of: sequence
location: complement(28189..28683)
location: region:28189-28683:-1
so has part: feature:28189-28683:-1:exon
subclass of: SO_0000010

position:28189:-1
position: 28189
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:28683:-1
position: 28683
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:28189-28683:-1:exon

D1367_RS29780
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 446679
locus tag: D1367_RS29780
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012413392.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MSRKPKAVPLSKIEDIQTSLKQKAATPKTISLSDLVLSLAKPIQDMLDAGYSYDDVSDVFKGHGVELAASGLKIFHKKATTTNENSSSNESSSKAVDESVNSDSEPELTDSSTSNNDSVLPVEPDSSPIDSSEPSGSSSTKTSKRKKTTSNTSSQFNITDRSEL
SIO_010081: D1367_RS29780
subclass of: SO_0000673
so part of: D1367_RS29780
location: complement(28189..28683)
location: region:28189-28683:-1
so has part: feature:28189-28683:-1:exon

WP_118171788.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:28189-28683:-1:exon

D1367_RS29785
type: Gene
subclass of: SO_0000704
RO_0002162: 446679
gene: mobC
locus tag: D1367_RS29785
so part of: sequence
location: 29236..29661
location: region:29236-29661:1
so has part: feature:29236-29661:1:exon
subclass of: SO_0000010

position:29236:1
position: 29236
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:29661:1
position: 29661
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:29236-29661:1:exon

D1367_RS29785
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 446679
gene: mobC
locus tag: D1367_RS29785
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012413391.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: plasmid mobilization relaxosome protein MobC
translation: MQPDPRTNLSNQLADTLTNRSVAPDEKREVTITFRASYAEKARLEQRCSGVVQSDYIRARLFDYPLPHPKLVIPEVNRQAIYELKKIGTNLNQQTKAINEAVKIGSQPLSNEVKSYLKTLEELTALLEQTRQSLTQASVEG
SIO_010081: D1367_RS29785
subclass of: SO_0000673
so part of: D1367_RS29785
location: 29236..29661
location: region:29236-29661:1
so has part: feature:29236-29661:1:exon

WP_118171789.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:29236-29661:1:exon

D1367_RS29790
type: Gene
subclass of: SO_0000704
RO_0002162: 446679
locus tag: D1367_RS29790
so part of: sequence
location: 29666..32122
location: region:29666-32122:1
so has part: feature:29666-32122:1:exon
subclass of: SO_0000010

position:29666:1
position: 29666
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:32122:1
position: 32122
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:29666-32122:1:exon

D1367_RS29790
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 446679
locus tag: D1367_RS29790
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012412826.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: relaxase/mobilization nuclease domain-containing protein
translation: MITKVKANKSFCGTTKYVLEKEKAKIIGGNMYGKSTNELVEQFTLSAHLNPQLKDPCYHLMVSVPKTDGALIDEQLAKMSERHFATVIVLSRLKGDEAQVKQPDKRIAETKLKELVDEFIESELPAYDFFIARHSDKDHDHTHIVASRVNNLDGKSIRTWNNYAHSEHSARLLEREFQLTQIQSSWESKQKAMTRNQLERVESLGLPGEEIMRRAIEQVAGNKLIMPQLIERLWREHQVKAIVSYYGHGGVRGIKFGIDVGSVNEDGSPRLLWKQGGNLNKYKCSFTKLQSELGINYDPKRDDSEIKRLNNFLESVDNNQVNQQIILTVLPKEAQGIAKTKHQINPAKSDAEQRASSELINTISNFIEQSAVDNALVETLPQLAEQLSQYNQQLSAGRTAFDELSLAITQELQSHTEKKAILSISDYIEQSTVESALTEAVLELTQQLSQYKEELVTAKTTFNDLDAVLATELQSYTENRAISSISDYIEQSTVESALTEAVLELTQQLSQYKEELVTAKATFNDLDAELAAELQSYLEKRAISSISDYIEQSTVESALTETVLELTQQLSQNQQQLSAGRTIFDDLEAAIVYLEQLHRSQRAVDAVALNETPTITADKSKLKDNLRAELYQYYSADLQNLLVTDRDKEIAIRALLDNKSPQDVKEIIFASPAGWTTDEARELVLIASNQLATQKSEPEQSLTEKQRQESEFLAMAVPIAVKLINWQLRESGSNSLRFKRATLEKQGRELVFTHDERGEIFRVAVNRNQSGELEYSPIHVGEVEIEDIQLWQKAERVLQQIISEAERQSIRQSKGISL
SIO_010081: D1367_RS29790
subclass of: SO_0000673
so part of: D1367_RS29790
location: 29666..32122
location: region:29666-32122:1
so has part: feature:29666-32122:1:exon

WP_118171790.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:29666-32122:1:exon

D1367_RS29795
type: Gene
subclass of: SO_0000704
RO_0002162: 446679
locus tag: D1367_RS29795
so part of: sequence
location: complement(32391..33293)
location: region:32391-33293:-1
so has part: feature:32391-33293:-1:exon
subclass of: SO_0000010

position:32391:-1
position: 32391
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:33293:-1
position: 33293
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:32391-33293:-1:exon

D1367_RS29795
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 446679
locus tag: D1367_RS29795
inference: COORDINATES: protein motif:HMM:NF012318.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: serine protease
translation: MKPTKALAKSLIREKAEKVTVFISRGGQQLGSGVIIGQNGKTVYVLTASHVIGIRPGKVDTGNGTLETENPYEVTTNNGQKFKVGYSNYKIIVNPFSNNIDLAILKLDTSSKNIYKDEVAKLTSSLKKNMPVYIFGYLPCSPSAKVNKGKQDQFSNGKIFPVTSSSQFDSSDKLGGYDVNYNNNTIQGMSGSPVFDAAGRVVAIHAKTDKKKTYNSEVCLPLPSEPTPDYGDNSGISIKTFANLKSDWPDGLQSILEIDSSPVEEVKPDEPTPSPNPTQTTRREENCPPFIQPGEDCPGR
SIO_010081: D1367_RS29795
subclass of: SO_0000673
so part of: D1367_RS29795
location: complement(32391..33293)
location: region:32391-33293:-1
so has part: feature:32391-33293:-1:exon

WP_181985248.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:32391-33293:-1:exon