Melospiza georgiana isolate bMelGeo1 chromosome 31, bMelGeo1.pri, whole genome shotgun sequence.
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Passeriformes; Passerellidae; Melospiza.
REFSEQ INFORMATION: The reference sequence is identical to\nCM051593.1.\nAssembly name: bMelGeo1.pri\nThe genomic sequence for this RefSeq record is from the\nwhole-genome assembly released by the Vertebrate Genomes Project on\n2023/01/31. The original whole-genome shotgun project has the\naccession JAQMCQ000000000.1.\n\n##Genome-Assembly-Data-START##\nAssembly Provider :: Vertebrate Genomes Project\nAssembly Date :: 20-MAY-2022\nAssembly Method :: HiFiasm v. 0.15.4 + galaxy0; purge_dups\n v. 1.2.5 + galaxy3; Bionano Solve v.\n 3.6.1 + galaxy2; salsa v. 2.3 + galaxy2\nAssembly Name :: bMelGeo1.pri\nDiploid :: Principal Haplotype\nGenome Representation :: Full\nExpected Final Version :: No\nGenome Coverage :: 31.58x\nSequencing Technology :: PacBio Sequel II HiFi\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI RefSeq\nAnnotation Status :: Full annotation\nAnnotation Name :: GCF_028018845.1-RS_2023_07\nAnnotation Pipeline :: NCBI eukaryotic genome annotation\n pipeline\nAnnotation Software Version :: 10.1\nAnnotation Method :: Gnomon; cmsearch; tRNAscan-SE\nFeatures Annotated :: Gene; mRNA; CDS; ncRNA\nAnnotation Date :: 07/03/2023\n##Genome-Annotation-Data-END##
dedicator of cytokinesis protein 5-like; Derived by automated computational analysis using gene prediction method: Gnomon.
The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 16 Proteins
The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
LOW QUALITY PROTEIN: dedicator of cytokinesis protein 5-like
neurofilament light chain; Derived by automated computational analysis using gene prediction method: Gnomon.
COORDINATES: polyA evidence [ECO:0006239]
Derived by automated computational analysis using gene prediction method: Gnomon.
neurofilament medium chain; Derived by automated computational analysis using gene prediction method: Gnomon.
ADAM metallopeptidase domain 28; Derived by automated computational analysis using gene prediction method: Gnomon.
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 Proteins
disintegrin and metalloproteinase domain-containing protein 28
stanniocalcin 1; Derived by automated computational analysis using gene prediction method: Gnomon.
The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins
The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
NK3 homeobox 1; Derived by automated computational analysis using gene prediction method: Gnomon.
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins
solute carrier family 25 member 37; Derived by automated computational analysis using gene prediction method: Gnomon.
The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 18 Proteins
ectonucleoside triphosphate diphosphohydrolase 4; Derived by automated computational analysis using gene prediction method: Gnomon.
ectonucleoside triphosphate diphosphohydrolase 4
The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon
LOW QUALITY PROTEIN: ectonucleoside triphosphate diphosphohydrolase 4
lysyl oxidase like 2; Derived by automated computational analysis using gene prediction method: Gnomon.
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 37 long SRA reads, 16 Proteins
R3H domain and coiled-coil containing 1; Derived by automated computational analysis using gene prediction method: Gnomon.
R3H domain and coiled-coil containing 1, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 long SRA read, 6 Proteins
R3H domain and coiled-coil containing 1, transcript variant X1
R3H and coiled-coil domain-containing protein 1
D(1)-like dopamine receptor; Derived by automated computational analysis using gene prediction method: Gnomon.
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 37 Proteins
charged multivesicular body protein 7; Derived by automated computational analysis using gene prediction method: Gnomon.
tumor necrosis factor receptor superfamily member 10B-like; Derived by automated computational analysis using gene prediction method: Gnomon.
tumor necrosis factor receptor superfamily member 10B-like
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 long SRA read, 4 Proteins
Rho related BTB domain containing 2; Derived by automated computational analysis using gene prediction method: Gnomon.
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 15 Proteins
rho-related BTB domain-containing protein 2
phosphatidylethanolamine binding protein 4; Derived by automated computational analysis using gene prediction method: Gnomon.
phosphatidylethanolamine binding protein 4
phosphatidylethanolamine-binding protein 4
early growth response 3; Derived by automated computational analysis using gene prediction method: Gnomon.
early growth response 3, transcript variant X2
early growth response protein 3 isoform X2
early growth response 3, transcript variant X1
early growth response 3, transcript variant X3
early growth response protein 3 isoform X1
bridging integrator 3; Derived by automated computational analysis using gene prediction method: Gnomon.
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 long SRA read, 9 Proteins
chromosome 31 C8orf58 homolog; Derived by automated computational analysis using gene prediction method: Gnomon.
chromosome 31 C8orf58 homolog, transcript variant X11
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins
uncharacterized protein C8orf58 homolog isoform X2
chromosome 31 C8orf58 homolog, transcript variant X9
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins
chromosome 31 C8orf58 homolog, transcript variant X8
chromosome 31 C8orf58 homolog, transcript variant X3
chromosome 31 C8orf58 homolog, transcript variant X7
chromosome 31 C8orf58 homolog, transcript variant X6
chromosome 31 C8orf58 homolog, transcript variant X4
chromosome 31 C8orf58 homolog, transcript variant X5
chromosome 31 C8orf58 homolog, transcript variant X2
chromosome 31 C8orf58 homolog, transcript variant X1
chromosome 31 C8orf58 homolog, transcript variant X10
uncharacterized protein C8orf58 homolog isoform X1
PDZ and LIM domain 2; Derived by automated computational analysis using gene prediction method: Gnomon.
PDZ and LIM domain 2, transcript variant X3
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 long SRA read, 12 Proteins
PDZ and LIM domain 2, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 long SRA read
PDZ and LIM domain 2, transcript variant X1
sorbin and SH3 domain containing 3; Derived by automated computational analysis using gene prediction method: Gnomon.
protein phosphatase 3 catalytic subunit gamma; Derived by automated computational analysis using gene prediction method: Gnomon.
protein phosphatase 3 catalytic subunit gamma, transcript variant X6
protein phosphatase 3 catalytic subunit gamma, transcript variant X3
protein phosphatase 3 catalytic subunit gamma, transcript variant X2
protein phosphatase 3 catalytic subunit gamma, transcript variant X5
protein phosphatase 3 catalytic subunit gamma, transcript variant X4
protein phosphatase 3 catalytic subunit gamma, transcript variant X1
serine/threonine-protein phosphatase 2B catalytic subunit gamma isoform isoform X2
serine/threonine-protein phosphatase 2B catalytic subunit gamma isoform isoform X1
solute carrier family 39 member 14; Derived by automated computational analysis using gene prediction method: Gnomon.
solute carrier family 39 member 14, transcript variant X2
solute carrier family 39 member 14, transcript variant X1
solute carrier family 39 member 14, transcript variant X3
piwi like RNA-mediated gene silencing 2; Derived by automated computational analysis using gene prediction method: Gnomon.
RNA polymerase III subunit D; Derived by automated computational analysis using gene prediction method: Gnomon.
RNA polymerase III subunit D, transcript variant X2
RNA polymerase III subunit D, transcript variant X1
DNA-directed RNA polymerase III subunit RPC4 isoform X2
DNA-directed RNA polymerase III subunit RPC4 isoform X1
phytanoyl-CoA 2-hydroxylase interacting protein; Derived by automated computational analysis using gene prediction method: Gnomon.
phytanoyl-CoA 2-hydroxylase interacting protein
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 16 Proteins
phytanoyl-CoA hydroxylase-interacting protein
bone morphogenetic protein 1; Derived by automated computational analysis using gene prediction method: Gnomon.
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 27 Proteins
surfactant protein C; Derived by automated computational analysis using gene prediction method: Gnomon.
pulmonary surfactant-associated protein C
leucine rich repeat LGI family member 3; Derived by automated computational analysis using gene prediction method: Gnomon.
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 24 Proteins
receptor accessory protein 4; Derived by automated computational analysis using gene prediction method: Gnomon.
HR lysine demethylase and nuclear receptor corepressor; Derived by automated computational analysis using gene prediction method: Gnomon.
HR lysine demethylase and nuclear receptor corepressor
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins
nudix hydrolase 18; Derived by automated computational analysis using gene prediction method: Gnomon.
FHF complex subunit HOOK interacting protein 2B; Derived by automated computational analysis using gene prediction method: Gnomon.
FHF complex subunit HOOK interacting protein 2B, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 long SRA reads, 6 Proteins
FHF complex subunit HOOK interacting protein 2B, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 long SRA reads, 2 Proteins
FHF complex subunit HOOK-interacting protein 2B isoform X2
FHF complex subunit HOOK-interacting protein 2B isoform X1
actin filament-associated protein 1-like 2; Derived by automated computational analysis using gene prediction method: Gnomon.
actin filament-associated protein 1-like 2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein
dematin actin binding protein; Derived by automated computational analysis using gene prediction method: Gnomon.
nucleophosmin/nucleoplasmin 2; Derived by automated computational analysis using gene prediction method: Gnomon.
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 long SRA reads, 4 Proteins
polysaccharide biosynthesis domain containing 1; Derived by automated computational analysis using gene prediction method: Gnomon.
polysaccharide biosynthesis domain containing 1
exportin 7; Derived by automated computational analysis using gene prediction method: Gnomon.
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 long SRA reads, 16 Proteins
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 long SRA reads, 3 Proteins
docking protein 2; Derived by automated computational analysis using gene prediction method: Gnomon.
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins
GDNF family receptor alpha 2; Derived by automated computational analysis using gene prediction method: Gnomon.
unc-5 netrin receptor D; Derived by automated computational analysis using gene prediction method: Gnomon.
leucine zipper tumor suppressor 1; Derived by automated computational analysis using gene prediction method: Gnomon.
leucine zipper tumor suppressor 1, transcript variant X1
leucine zipper tumor suppressor 1, transcript variant X2
leucine zipper putative tumor suppressor 1
putative uncharacterized protein AFDN-DT; Derived by automated computational analysis using gene prediction method: Gnomon.
putative uncharacterized protein AFDN-DT
ATPase H+ transporting V1 subunit B2; Derived by automated computational analysis using gene prediction method: Gnomon.
V-type proton ATPase subunit B, brain isoform
MAK16 homolog; Derived by automated computational analysis using gene prediction method: Gnomon.
TELO2 interacting protein 2; Derived by automated computational analysis using gene prediction method: Gnomon.
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 12 Proteins
small nucleolar RNA U13; Derived by automated computational analysis using gene prediction method: cmsearch.
COORDINATES: nucleotide motif:Rfam:14.6:RF01210
Derived by automated computational analysis using gene prediction method: cmsearch.
dual specificity phosphatase 26; Derived by automated computational analysis using gene prediction method: Gnomon.
zinc finger protein 703; Derived by automated computational analysis using gene prediction method: Gnomon.
zinc finger protein 703, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 long SRA reads, 12 Proteins
zinc finger protein 703, transcript variant X1
ER lipid raft associated 2; Derived by automated computational analysis using gene prediction method: Gnomon.
pyridoxal phosphate binding protein; Derived by automated computational analysis using gene prediction method: Gnomon.
adhesion G protein-coupled receptor A2; Derived by automated computational analysis using gene prediction method: Gnomon.
BRF2 RNA polymerase III transcription initiation factor subunit; Derived by automated computational analysis using gene prediction method: Gnomon.
BRF2 RNA polymerase III transcription initiation factor subunit, transcript variant X1
BRF2 RNA polymerase III transcription initiation factor subunit, transcript variant X2
transcription factor IIIB 50 kDa subunit isoform X2
transcription factor IIIB 50 kDa subunit isoform X1
RAB11 family interacting protein 1; Derived by automated computational analysis using gene prediction method: Gnomon.
adrenoceptor beta 3; Derived by automated computational analysis using gene prediction method: Gnomon.
eukaryotic translation initiation factor 4E binding protein 1; Derived by automated computational analysis using gene prediction method: Gnomon.
eukaryotic translation initiation factor 4E binding protein 1, transcript variant X1
eukaryotic translation initiation factor 4E binding protein 1, transcript variant X2
eukaryotic translation initiation factor 4E-binding protein 1 isoform X1
eukaryotic translation initiation factor 4E-binding protein 1 isoform X2
nodal growth differentiation factor; Derived by automated computational analysis using gene prediction method: Gnomon.
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 21 Proteins
ASH2 like, histone lysine methyltransferase complex subunit; Derived by automated computational analysis using gene prediction method: Gnomon.
ASH2 like, histone lysine methyltransferase complex subunit, transcript variant X1
ASH2 like, histone lysine methyltransferase complex subunit, transcript variant X2
set1/Ash2 histone methyltransferase complex subunit ASH2 isoform X1
set1/Ash2 histone methyltransferase complex subunit ASH2 isoform X2
steroidogenic acute regulatory protein; Derived by automated computational analysis using gene prediction method: Gnomon.
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 14 Proteins
steroidogenic acute regulatory protein, mitochondrial
LSM1 homolog, mRNA degradation associated; Derived by automated computational analysis using gene prediction method: Gnomon.
LSM1 homolog, mRNA degradation associated, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 long SRA reads, 11 Proteins
LSM1 homolog, mRNA degradation associated, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 long SRA reads, 1 Protein
U6 snRNA-associated Sm-like protein LSm1 isoform X2
U6 snRNA-associated Sm-like protein LSm1 isoform X1
BAG cochaperone 4; Derived by automated computational analysis using gene prediction method: Gnomon.
BAG family molecular chaperone regulator 4
DDHD domain containing 2; Derived by automated computational analysis using gene prediction method: Gnomon.
DDHD domain containing 2, transcript variant X1
DDHD domain containing 2, transcript variant X2
phospholipid phosphatase 5; Derived by automated computational analysis using gene prediction method: Gnomon.
nuclear receptor binding SET domain protein 3; Derived by automated computational analysis using gene prediction method: Gnomon.
nuclear receptor binding SET domain protein 3, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 long SRA reads, 4 Proteins
nuclear receptor binding SET domain protein 3, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 long SRA reads, 10 Proteins
histone-lysine N-methyltransferase NSD3 isoform X2
histone-lysine N-methyltransferase NSD3 isoform X1
leucine zipper and EF-hand containing transmembrane protein 2; Derived by automated computational analysis using gene prediction method: Gnomon.
leucine zipper and EF-hand containing transmembrane protein 2, transcript variant X2
leucine zipper and EF-hand containing transmembrane protein 2, transcript variant X3
leucine zipper and EF-hand containing transmembrane protein 2, transcript variant X1
LETM1 domain-containing protein LETM2, mitochondrial isoform X2
LETM1 domain-containing protein LETM2, mitochondrial isoform X1
uncharacterized LOC131094959; Derived by automated computational analysis using gene prediction method: Gnomon.
fibroblast growth factor receptor 1; Derived by automated computational analysis using gene prediction method: Gnomon.
fibroblast growth factor receptor 1, transcript variant X3
fibroblast growth factor receptor 1, transcript variant X2
fibroblast growth factor receptor 1, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 25 Proteins
fibroblast growth factor receptor 1 isoform X2
fibroblast growth factor receptor 1 isoform X1
fibroblast growth factor receptor 1 isoform X3
transforming acidic coiled-coil containing protein 1; Derived by automated computational analysis using gene prediction method: Gnomon.
transforming acidic coiled-coil containing protein 1, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins
transforming acidic coiled-coil containing protein 1, transcript variant X2
transforming acidic coiled-coil-containing protein 1 isoform X1
transforming acidic coiled-coil-containing protein 1 isoform X2
pleckstrin homology domain containing A2; Derived by automated computational analysis using gene prediction method: Gnomon.
pleckstrin homology domain containing A2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 long SRA reads, 5 Proteins
pleckstrin homology domain-containing family A member 2
TM2 domain containing 2; Derived by automated computational analysis using gene prediction method: Gnomon.
ADAM metallopeptidase domain 9; Derived by automated computational analysis using gene prediction method: Gnomon.
disintegrin and metalloproteinase domain-containing protein 9
disintegrin and metalloproteinase domain-containing protein 32-like; Derived by automated computational analysis using gene prediction method: Gnomon.
disintegrin and metalloproteinase domain-containing protein 32-like
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins
indoleamine 2,3-dioxygenase 2-like; Derived by automated computational analysis using gene prediction method: Gnomon.
transcriptional and immune response regulator; Derived by automated computational analysis using gene prediction method: Gnomon.
transcriptional and immune response regulator
zinc finger matrin-type 4; Derived by automated computational analysis using gene prediction method: Gnomon.
secreted frizzled related protein 1; Derived by automated computational analysis using gene prediction method: Gnomon.
golgin A7; Derived by automated computational analysis using gene prediction method: Gnomon.
GINS complex subunit 4; Derived by automated computational analysis using gene prediction method: Gnomon.
GINS complex subunit 4, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 13 Proteins
DNA replication complex GINS protein SLD5 isoform X2
GINS complex subunit 4, transcript variant X1
DNA replication complex GINS protein SLD5 isoform X1
glycerol-3-phosphate acyltransferase 4; Derived by automated computational analysis using gene prediction method: Gnomon.
NK6 homeobox 3; Derived by automated computational analysis using gene prediction method: Gnomon.
ankyrin 1; Derived by automated computational analysis using gene prediction method: Gnomon.
lysine acetyltransferase 6A; Derived by automated computational analysis using gene prediction method: Gnomon.
adaptor related protein complex 3 subunit mu 2; Derived by automated computational analysis using gene prediction method: Gnomon.
adaptor related protein complex 3 subunit mu 2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 long SRA reads, 19 Proteins
plasminogen activator, tissue type; Derived by automated computational analysis using gene prediction method: Gnomon.
plasminogen activator, tissue type, transcript variant X3
plasminogen activator, tissue type, transcript variant X1
plasminogen activator, tissue type, transcript variant X4
plasminogen activator, tissue type, transcript variant X2
tissue-type plasminogen activator isoform X2
tissue-type plasminogen activator isoform X1
inhibitor of nuclear factor kappa B kinase subunit beta; Derived by automated computational analysis using gene prediction method: Gnomon.
inhibitor of nuclear factor kappa B kinase subunit beta
inhibitor of nuclear factor kappa-B kinase subunit beta
voltage dependent anion channel 3; Derived by automated computational analysis using gene prediction method: Gnomon.
voltage dependent anion channel 3, transcript variant X1
voltage dependent anion channel 3, transcript variant X2
voltage-dependent anion-selective channel protein 3 isoform X1
voltage-dependent anion-selective channel protein 3 isoform X2
DNA polymerase beta; Derived by automated computational analysis using gene prediction method: Gnomon.
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 19 Proteins
leucine rich repeat transmembrane neuronal 4; Derived by automated computational analysis using gene prediction method: Gnomon.
leucine rich repeat transmembrane neuronal 4, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 17 Proteins
leucine rich repeat transmembrane neuronal 4, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 long SRA read, 20 Proteins
leucine-rich repeat transmembrane neuronal protein 4 isoform X1
leucine-rich repeat transmembrane neuronal protein 4 isoform X2
transforming growth factor alpha; Derived by automated computational analysis using gene prediction method: Gnomon.
family with sequence similarity 136 member A; Derived by automated computational analysis using gene prediction method: Gnomon.
family with sequence similarity 136 member A
prenylcysteine oxidase 1-like; Derived by automated computational analysis using gene prediction method: Gnomon.
small nuclear ribonucleoprotein polypeptide G; Derived by automated computational analysis using gene prediction method: Gnomon.
small nuclear ribonucleoprotein polypeptide G
transfer RNA glycine (anticodon CCC); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
TIA1 cytotoxic granule associated RNA binding protein; Derived by automated computational analysis using gene prediction method: Gnomon.
TIA1 cytotoxic granule associated RNA binding protein, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 long SRA reads, 13 Proteins
TIA1 cytotoxic granule associated RNA binding protein, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 long SRA reads, 3 Proteins
cytotoxic granule associated RNA binding protein TIA1 isoform X2
cytotoxic granule associated RNA binding protein TIA1 isoform X1
TIA1 cytotoxic granule associated RNA binding protein, transcript variant X3
cytotoxic granule associated RNA binding protein TIA1 isoform X3
chromosome 31 C2orf42 homolog; Derived by automated computational analysis using gene prediction method: Gnomon.
mitochondrial ribosomal protein S24; Derived by automated computational analysis using gene prediction method: Gnomon.
28S ribosomal protein S24, mitochondrial
uncharacterized LOC131094863; Derived by automated computational analysis using gene prediction method: Gnomon.
NPC1 like intracellular cholesterol transporter 1; Derived by automated computational analysis using gene prediction method: Gnomon.
NPC1 like intracellular cholesterol transporter 1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 Proteins
NPC1-like intracellular cholesterol transporter 1
DEAD-box helicase 56; Derived by automated computational analysis using gene prediction method: Gnomon.
probable ATP-dependent RNA helicase DDX56
transmembrane p24 trafficking protein 4; Derived by automated computational analysis using gene prediction method: Gnomon.
transmembrane emp24 domain-containing protein 4
interleukin-36 receptor antagonist protein-like; Derived by automated computational analysis using gene prediction method: Gnomon.
interleukin-36 receptor antagonist protein-like
uncharacterized LOC131094769; Derived by automated computational analysis using gene prediction method: Gnomon.
StAR related lipid transfer domain containing 7; Derived by automated computational analysis using gene prediction method: Gnomon.
StAR related lipid transfer domain containing 7, transcript variant X2
StAR related lipid transfer domain containing 7, transcript variant X1
stAR-related lipid transfer protein 7, mitochondrial isoform X2
stAR-related lipid transfer protein 7, mitochondrial isoform X1
StAR related lipid transfer domain containing 7, transcript variant X3
stAR-related lipid transfer protein 7, mitochondrial isoform X3
transmembrane protein 127; Derived by automated computational analysis using gene prediction method: Gnomon.
cytosolic iron-sulfur assembly component 1; Derived by automated computational analysis using gene prediction method: Gnomon.
cytosolic iron-sulfur assembly component 1
probable cytosolic iron-sulfur protein assembly protein CIAO1
small nuclear ribonucleoprotein U5 subunit 200; Derived by automated computational analysis using gene prediction method: Gnomon.
small nuclear ribonucleoprotein U5 subunit 200
U5 small nuclear ribonucleoprotein 200 kDa helicase
semaphorin 4C; Derived by automated computational analysis using gene prediction method: Gnomon.
ankyrin repeat domain 39; Derived by automated computational analysis using gene prediction method: Gnomon.
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins
ankyrin repeat domain-containing protein 39
uncharacterized LOC131094936; Derived by automated computational analysis using gene prediction method: Gnomon.
cyclin and CBS domain divalent metal cation transport mediator 4; Derived by automated computational analysis using gene prediction method: Gnomon.
cyclin and CBS domain divalent metal cation transport mediator 4
lectin, mannose binding 2 like; Derived by automated computational analysis using gene prediction method: Gnomon.
lectin, mannose binding 2 like, transcript variant X2
lectin, mannose binding 2 like, transcript variant X1
methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 2, methenyltetrahydrofolate cyclohydrolase; Derived by automated computational analysis using gene prediction method: Gnomon.
methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 2, methenyltetrahydrofolate cyclohydrolase
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 long SRA reads, 26 Proteins
bifunctional methylenetetrahydrofolate dehydrogenase/cyclohydrolase, mitochondrial
solute carrier family 4 member 5; Derived by automated computational analysis using gene prediction method: Gnomon.
electrogenic sodium bicarbonate cotransporter 4
tetraspanin-15-like; Derived by automated computational analysis using gene prediction method: Gnomon.
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 long SRA read, 3 Proteins
tachykinin receptor 1; Derived by automated computational analysis using gene prediction method: Gnomon.
tachykinin receptor 1, transcript variant X2
tachykinin receptor 1, transcript variant X1
tachykinin receptor 1, transcript variant X4
tachykinin receptor 1, transcript variant X5
tachykinin receptor 1, transcript variant X3
non-SMC condensin I complex subunit H; Derived by automated computational analysis using gene prediction method: Gnomon.
AT-rich interaction domain 5A; Derived by automated computational analysis using gene prediction method: Gnomon.
AT-rich interaction domain 5A, transcript variant X1
AT-rich interaction domain 5A, transcript variant X3
AT-rich interaction domain 5A, transcript variant X2
AT-rich interactive domain-containing protein 5A
KAT8 regulatory NSL complex subunit 3; Derived by automated computational analysis using gene prediction method: Gnomon.
KAT8 regulatory NSL complex subunit 3, transcript variant X3
KAT8 regulatory NSL complex subunit 3, transcript variant X2
KAT8 regulatory NSL complex subunit 3, transcript variant X1
KAT8 regulatory NSL complex subunit 3 isoform X3
KAT8 regulatory NSL complex subunit 3 isoform X2
KAT8 regulatory NSL complex subunit 3 isoform X1
fer-1 like family member 5; Derived by automated computational analysis using gene prediction method: Gnomon.
bolA family member 3; Derived by automated computational analysis using gene prediction method: Gnomon.
uncharacterized LOC131094877; Derived by automated computational analysis using gene prediction method: Gnomon.
uncharacterized LOC131094877, transcript variant X1
uncharacterized LOC131094877, transcript variant X3
uncharacterized LOC131094877, transcript variant X2
uncharacterized protein LOC131094877 isoform X1
uncharacterized protein LOC131094877 isoform X3
uncharacterized protein LOC131094877 isoform X2
tet methylcytosine dioxygenase 3; Derived by automated computational analysis using gene prediction method: Gnomon.
The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 5 bases in 4 codons; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 long SRA reads, 7 Proteins
The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 5 bases in 4 codons; Derived by automated computational analysis using gene prediction method: Gnomon.
LOW QUALITY PROTEIN: methylcytosine dioxygenase TET3
deoxyguanosine kinase; Derived by automated computational analysis using gene prediction method: Gnomon.
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 20 Proteins
actin gamma 2, smooth muscle; Derived by automated computational analysis using gene prediction method: Gnomon.
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 328 Proteins
STAM binding protein; Derived by automated computational analysis using gene prediction method: Gnomon.
dual specificity phosphatase 11; Derived by automated computational analysis using gene prediction method: Gnomon.
dual specificity phosphatase 11, transcript variant X2
dual specificity phosphatase 11, transcript variant X1
RNA/RNP complex-1-interacting phosphatase isoform X2
RNA/RNP complex-1-interacting phosphatase isoform X1
prominin 2; Derived by automated computational analysis using gene prediction method: Gnomon.
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 long SRA reads, 12 Proteins
uncharacterized LOC131094846; Derived by automated computational analysis using gene prediction method: Gnomon.
uncharacterized LOC131094846, transcript variant X1
uncharacterized LOC131094846, transcript variant X2
prion protein; Derived by automated computational analysis using gene prediction method: Gnomon.
Ras association domain family member 2; Derived by automated computational analysis using gene prediction method: Gnomon.
Ras association domain family member 2, transcript variant X3
Ras association domain family member 2, transcript variant X1
Ras association domain family member 2, transcript variant X2
ras association domain-containing protein 2
solute carrier family 23 member 2; Derived by automated computational analysis using gene prediction method: Gnomon.
transmembrane protein 230; Derived by automated computational analysis using gene prediction method: Gnomon.
proliferating cell nuclear antigen; Derived by automated computational analysis using gene prediction method: Gnomon.
CDP-diacylglycerol synthase 2; Derived by automated computational analysis using gene prediction method: Gnomon.
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 long SRA reads, 18 Proteins
Rho GTPase activating protein 25; Derived by automated computational analysis using gene prediction method: Gnomon.
bone morphogenetic protein 10; Derived by automated computational analysis using gene prediction method: Gnomon.
gastrokine 2; Derived by automated computational analysis using gene prediction method: Gnomon.
uncharacterized LOC131094776; Derived by automated computational analysis using gene prediction method: Gnomon.
uncharacterized LOC131094777; Derived by automated computational analysis using gene prediction method: Gnomon.
uncharacterized LOC131094778; Derived by automated computational analysis using gene prediction method: Gnomon.
The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 13 Proteins
The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; substituted 1 base at 1 genomic stop codon; Derived by automated computational analysis using gene prediction method: Gnomon.
LOW QUALITY PROTEIN: uncharacterized protein LOC131094778
gastrokine 1; Derived by automated computational analysis using gene prediction method: Gnomon.
The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins
ANTXR cell adhesion molecule 1; Derived by automated computational analysis using gene prediction method: Gnomon.
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 18 Proteins
glutamine--fructose-6-phosphate transaminase 1; Derived by automated computational analysis using gene prediction method: Gnomon.
glutamine--fructose-6-phosphate transaminase 1, transcript variant X1
glutamine--fructose-6-phosphate transaminase 1, transcript variant X2
glutamine--fructose-6-phosphate aminotransferase [isomerizing] 1 isoform X1
glutamine--fructose-6-phosphate aminotransferase [isomerizing] 1 isoform X2
NFU1 iron-sulfur cluster scaffold; Derived by automated computational analysis using gene prediction method: Gnomon.
NFU1 iron-sulfur cluster scaffold, transcript variant X2
NFU1 iron-sulfur cluster scaffold, transcript variant X1
NFU1 iron-sulfur cluster scaffold, transcript variant X3
NFU1 iron-sulfur cluster scaffold homolog, mitochondrial isoform X1
NFU1 iron-sulfur cluster scaffold homolog, mitochondrial isoform X2
uncharacterized protein FLJ45252-like; Derived by automated computational analysis using gene prediction method: Gnomon.
AP2 associated kinase 1; Derived by automated computational analysis using gene prediction method: Gnomon.
AP2 associated kinase 1, transcript variant X2
AP2 associated kinase 1, transcript variant X1
AP2-associated protein kinase 1 isoform X2
AP2-associated protein kinase 1 isoform X1
annexin A4; Derived by automated computational analysis using gene prediction method: Gnomon.
germ cell-less 1, spermatogenesis associated; Derived by automated computational analysis using gene prediction method: Gnomon.
germ cell-less 1, spermatogenesis associated, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 15 long SRA reads, 12 Proteins
germ cell-less 1, spermatogenesis associated, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 15 long SRA reads, 1 Protein
germ cell-less protein-like 1 isoform X1
germ cell-less protein-like 1 isoform X2
hexokinase-2; Derived by automated computational analysis using gene prediction method: Gnomon.
adducin 2; Derived by automated computational analysis using gene prediction method: Gnomon.
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 41 Proteins
small nuclear ribonucleoprotein U4/U6.U5 subunit 27; Derived by automated computational analysis using gene prediction method: Gnomon.
small nuclear ribonucleoprotein U4/U6.U5 subunit 27
U4/U6.U5 small nuclear ribonucleoprotein 27 kDa protein
MAX dimerization protein 1; Derived by automated computational analysis using gene prediction method: Gnomon.
ubiquitin specific peptidase 39; Derived by automated computational analysis using gene prediction method: Gnomon.
chromosome 31 C2orf68 homolog; Derived by automated computational analysis using gene prediction method: Gnomon.
vesicle-associated membrane protein 5-like; Derived by automated computational analysis using gene prediction method: Gnomon.
vesicle-associated membrane protein 5-like
vesicle associated membrane protein 8; Derived by automated computational analysis using gene prediction method: Gnomon.
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 long SRA reads, 9 Proteins
gamma-glutamyl carboxylase; Derived by automated computational analysis using gene prediction method: Gnomon.
methionine adenosyltransferase 2A; Derived by automated computational analysis using gene prediction method: Gnomon.
histone H2A.V; Derived by automated computational analysis using gene prediction method: Gnomon.
purine rich element binding protein B; Derived by automated computational analysis using gene prediction method: Gnomon.
transcriptional activator protein Pur-beta
cytochrome c oxidase subunit 5B, mitochondrial; Derived by automated computational analysis using gene prediction method: Gnomon.
cytochrome c oxidase subunit 5B, mitochondrial
calsenilin-like; Derived by automated computational analysis using gene prediction method: Gnomon.
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 34 Proteins
fumarylacetoacetate hydrolase domain-containing protein 2-like; Derived by automated computational analysis using gene prediction method: Gnomon.
fumarylacetoacetate hydrolase domain-containing protein 2-like
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 long SRA reads, 13 Proteins
glycerol-3-phosphate acyltransferase 2, mitochondrial; Derived by automated computational analysis using gene prediction method: Gnomon.
glycerol-3-phosphate acyltransferase 2, mitochondrial
ELMO domain containing 3; Derived by automated computational analysis using gene prediction method: Gnomon.
The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: substituted 1 base at 1 genomic stop codon; Derived by automated computational analysis using gene prediction method: Gnomon.
LOW QUALITY PROTEIN: ELMO domain-containing protein 3
retinol saturase; Derived by automated computational analysis using gene prediction method: Gnomon.
trans-golgi network protein 2; Derived by automated computational analysis using gene prediction method: Gnomon.
trans-Golgi network integral membrane protein 2
transcription factor 7 like 1; Derived by automated computational analysis using gene prediction method: Gnomon.
transcription factor 7 like 1, transcript variant X4
transcription factor 7 like 1, transcript variant X2
transcription factor 7 like 1, transcript variant X3
transcription factor 7 like 1, transcript variant X1
transcription factor 7-like 1 isoform X2
transcription factor 7-like 1 isoform X3
transcription factor 7-like 1 isoform X4
transcription factor 7-like 1 isoform X1
drebrin like; Derived by automated computational analysis using gene prediction method: Gnomon.
AE binding protein 1; Derived by automated computational analysis using gene prediction method: Gnomon.
DNA polymerase delta 2, accessory subunit; Derived by automated computational analysis using gene prediction method: Gnomon.
DNA polymerase delta 2, accessory subunit
antimicrobial peptide NK-lysin-like; Derived by automated computational analysis using gene prediction method: Gnomon.
glucokinase; Derived by automated computational analysis using gene prediction method: Gnomon.
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 31 Proteins
YKT6 v-SNARE homolog; Derived by automated computational analysis using gene prediction method: Gnomon.
calcium/calmodulin dependent protein kinase II beta; Derived by automated computational analysis using gene prediction method: Gnomon.
calcium/calmodulin dependent protein kinase II beta, transcript variant X4
calcium/calmodulin dependent protein kinase II beta, transcript variant X3
calcium/calmodulin dependent protein kinase II beta, transcript variant X2
calcium/calmodulin dependent protein kinase II beta, transcript variant X1
calcium/calmodulin-dependent protein kinase type II subunit beta isoform X4
calcium/calmodulin-dependent protein kinase type II subunit beta isoform X3
calcium/calmodulin-dependent protein kinase type II subunit beta isoform X2
calcium/calmodulin-dependent protein kinase type II subunit beta isoform X1
NudC domain containing 3; Derived by automated computational analysis using gene prediction method: Gnomon.
The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 2 bases in 1 codon
The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 2 bases in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
LOW QUALITY PROTEIN: nudC domain-containing protein 3
solute carrier family 20 member 1; Derived by automated computational analysis using gene prediction method: Gnomon.
solute carrier family 20 member 1, transcript variant X2
solute carrier family 20 member 1, transcript variant X1
sodium-dependent phosphate transporter 1
cytosolic purine 5'-nucleotidase-like; Derived by automated computational analysis using gene prediction method: Gnomon.
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 long SRA reads, 27 Proteins
cytoskeleton-associated protein 2-like; Derived by automated computational analysis using gene prediction method: Gnomon.
cytoskeleton-associated protein 2-like, transcript variant X2
cytoskeleton-associated protein 2-like, transcript variant X1
cytoskeleton-associated protein 2-like isoform X1
cytoskeleton-associated protein 2-like isoform X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 long SRA reads, 1 Protein
cytoskeleton-associated protein 2-like, transcript variant X3
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 long SRA reads
interleukin-1 beta-like; Derived by automated computational analysis using gene prediction method: Gnomon.
oxoglutarate dehydrogenase; Derived by automated computational analysis using gene prediction method: Gnomon.
oxoglutarate dehydrogenase, transcript variant X1
oxoglutarate dehydrogenase, transcript variant X3
oxoglutarate dehydrogenase, transcript variant X2
2-oxoglutarate dehydrogenase complex component E1 isoform X1
2-oxoglutarate dehydrogenase complex component E1 isoform X3
2-oxoglutarate dehydrogenase complex component E1 isoform X2
zinc finger MIZ-type containing 2; Derived by automated computational analysis using gene prediction method: Gnomon.
zinc finger MIZ-type containing 2, transcript variant X1
zinc finger MIZ-type containing 2, transcript variant X2
zinc finger MIZ domain-containing protein 2 isoform X1
zinc finger MIZ domain-containing protein 2 isoform X2
peptidylprolyl isomerase A; Derived by automated computational analysis using gene prediction method: Gnomon.
steroid 21-hydroxylase-like; Derived by automated computational analysis using gene prediction method: Gnomon.
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 long SRA read, 2 Proteins
uncharacterized LOC131094839; Derived by automated computational analysis using gene prediction method: Gnomon.
uncharacterized LOC131094839, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 long SRA reads
uncharacterized LOC131094839, transcript variant X2
uncharacterized LOC131094840; Derived by automated computational analysis using gene prediction method: Gnomon.
uncharacterized LOC131094902; Derived by automated computational analysis using gene prediction method: Gnomon.