Melospiza georgiana isolate bMelGeo1 chromosome 27, bMelGeo1.pri, whole genome shotgun sequence.
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Passeriformes; Passerellidae; Melospiza.
REFSEQ INFORMATION: The reference sequence is identical to\nCM051589.1.\nAssembly name: bMelGeo1.pri\nThe genomic sequence for this RefSeq record is from the\nwhole-genome assembly released by the Vertebrate Genomes Project on\n2023/01/31. The original whole-genome shotgun project has the\naccession JAQMCQ000000000.1.\n\n##Genome-Assembly-Data-START##\nAssembly Provider :: Vertebrate Genomes Project\nAssembly Date :: 20-MAY-2022\nAssembly Method :: HiFiasm v. 0.15.4 + galaxy0; purge_dups\n v. 1.2.5 + galaxy3; Bionano Solve v.\n 3.6.1 + galaxy2; salsa v. 2.3 + galaxy2\nAssembly Name :: bMelGeo1.pri\nDiploid :: Principal Haplotype\nGenome Representation :: Full\nExpected Final Version :: No\nGenome Coverage :: 31.58x\nSequencing Technology :: PacBio Sequel II HiFi\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI RefSeq\nAnnotation Status :: Full annotation\nAnnotation Name :: GCF_028018845.1-RS_2023_07\nAnnotation Pipeline :: NCBI eukaryotic genome annotation\n pipeline\nAnnotation Software Version :: 10.1\nAnnotation Method :: Gnomon; cmsearch; tRNAscan-SE\nFeatures Annotated :: Gene; mRNA; CDS; ncRNA\nAnnotation Date :: 07/03/2023\n##Genome-Annotation-Data-END##
circumsporozoite protein-like; Derived by automated computational analysis using gene prediction method: Gnomon.
The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein
The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
LOW QUALITY PROTEIN: circumsporozoite protein-like
ETS proto-oncogene 1, transcription factor; Derived by automated computational analysis using gene prediction method: Gnomon.
ETS proto-oncogene 1, transcription factor
COORDINATES: polyA evidence [ECO:0006239]
Derived by automated computational analysis using gene prediction method: Gnomon.
kirre like nephrin family adhesion molecule 3; Derived by automated computational analysis using gene prediction method: Gnomon.
kirre like nephrin family adhesion molecule 3, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 Proteins
kirre like nephrin family adhesion molecule 3, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins
kirre like nephrin family adhesion molecule 3, transcript variant X3
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins
ST3 beta-galactoside alpha-2,3-sialyltransferase 4; Derived by automated computational analysis using gene prediction method: Gnomon.
ST3 beta-galactoside alpha-2,3-sialyltransferase 4, transcript variant X8
ST3 beta-galactoside alpha-2,3-sialyltransferase 4, transcript variant X4
ST3 beta-galactoside alpha-2,3-sialyltransferase 4, transcript variant X2
ST3 beta-galactoside alpha-2,3-sialyltransferase 4, transcript variant X6
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins
ST3 beta-galactoside alpha-2,3-sialyltransferase 4, transcript variant X7
ST3 beta-galactoside alpha-2,3-sialyltransferase 4, transcript variant X5
ST3 beta-galactoside alpha-2,3-sialyltransferase 4, transcript variant X3
ST3 beta-galactoside alpha-2,3-sialyltransferase 4, transcript variant X1
CMP-N-acetylneuraminate-beta-galactosamide- alpha-2,3-sialyltransferase 4 isoform X7
CMP-N-acetylneuraminate-beta-galactosamide- alpha-2,3-sialyltransferase 4 isoform X4
CMP-N-acetylneuraminate-beta-galactosamide- alpha-2,3-sialyltransferase 4 isoform X2
CMP-N-acetylneuraminate-beta-galactosamide- alpha-2,3-sialyltransferase 4 isoform X6
CMP-N-acetylneuraminate-beta-galactosamide- alpha-2,3-sialyltransferase 4 isoform X5
CMP-N-acetylneuraminate-beta-galactosamide- alpha-2,3-sialyltransferase 4 isoform X3
CMP-N-acetylneuraminate-beta-galactosamide- alpha-2,3-sialyltransferase 4 isoform X1
decapping enzyme, scavenger; Derived by automated computational analysis using gene prediction method: Gnomon.
TIR domain containing adaptor protein; Derived by automated computational analysis using gene prediction method: Gnomon.
TIR domain containing adaptor protein, transcript variant X1
TIR domain containing adaptor protein, transcript variant X2
toll/interleukin-1 receptor domain-containing adapter protein
family with sequence similarity 118 member B; Derived by automated computational analysis using gene prediction method: Gnomon.
family with sequence similarity 118 member B, transcript variant X2
family with sequence similarity 118 member B, transcript variant X3
family with sequence similarity 118 member B, transcript variant X1
family with sequence similarity 118 member B, transcript variant X4
family with sequence similarity 118 member B, transcript variant X5
SRP receptor subunit alpha; Derived by automated computational analysis using gene prediction method: Gnomon.
signal recognition particle receptor subunit alpha
FAD dependent oxidoreductase domain containing 1; Derived by automated computational analysis using gene prediction method: Gnomon.
FAD dependent oxidoreductase domain containing 1
FAD-dependent oxidoreductase domain-containing protein 1
EI24 autophagy associated transmembrane protein; Derived by automated computational analysis using gene prediction method: Gnomon.
EI24 autophagy associated transmembrane protein
STT3 oligosaccharyltransferase complex catalytic subunit A; Derived by automated computational analysis using gene prediction method: Gnomon.
STT3 oligosaccharyltransferase complex catalytic subunit A, transcript variant X1
STT3 oligosaccharyltransferase complex catalytic subunit A, transcript variant X3
STT3 oligosaccharyltransferase complex catalytic subunit A, transcript variant X2
dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit STT3A
checkpoint kinase 1; Derived by automated computational analysis using gene prediction method: Gnomon.
checkpoint kinase 1, transcript variant X1
serine/threonine-protein kinase Chk1 isoform X1
checkpoint kinase 1, transcript variant X2
serine/threonine-protein kinase Chk1 isoform X2
cell adhesion associated, oncogene regulated; Derived by automated computational analysis using gene prediction method: Gnomon.
cell adhesion associated, oncogene regulated
cell adhesion molecule-related/down-regulated by oncogenes
V-set and immunoglobulin domain containing 10 like 2; Derived by automated computational analysis using gene prediction method: Gnomon.
V-set and immunoglobulin domain containing 10 like 2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 Proteins
V-set and immunoglobulin domain-containing protein 10-like 2
DEAD-box helicase 25; Derived by automated computational analysis using gene prediction method: Gnomon.
DEAD-box helicase 25, transcript variant X3
DEAD-box helicase 25, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein
DEAD-box helicase 25, transcript variant X1
ATP-dependent RNA helicase DDX25 isoform X2
ATP-dependent RNA helicase DDX25 isoform X1
HYLS1 centriolar and ciliogenesis associated; Derived by automated computational analysis using gene prediction method: Gnomon.
HYLS1 centriolar and ciliogenesis associated
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 long SRA reads, 3 Proteins
centriolar and ciliogenesis-associated protein HYLS1
pseudouridine synthase 3; Derived by automated computational analysis using gene prediction method: Gnomon.
RNA pseudouridine synthase D4; Derived by automated computational analysis using gene prediction method: Gnomon.
RNA pseudouridine synthase D4, transcript variant X2
RNA pseudouridine synthase D4, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 long SRA read, 10 Proteins
pseudouridylate synthase RPUSD4, mitochondrial isoform X1
pseudouridylate synthase RPUSD4, mitochondrial isoform X2
pannexin 3; Derived by automated computational analysis using gene prediction method: Gnomon.
sialic acid acetylesterase; Derived by automated computational analysis using gene prediction method: Gnomon.
sperm autoantigenic protein 17; Derived by automated computational analysis using gene prediction method: Gnomon.
neurogranin; Derived by automated computational analysis using gene prediction method: Gnomon.
endothelial cell-selective adhesion molecule-like; Derived by automated computational analysis using gene prediction method: Gnomon.
endothelial cell-selective adhesion molecule-like
Myb/SANT DNA binding domain containing 2; Derived by automated computational analysis using gene prediction method: Gnomon.
Myb/SANT DNA binding domain containing 2, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins
Myb/SANT DNA binding domain containing 2, transcript variant X2
myb/SANT-like DNA-binding domain-containing protein 2 isoform X1
myb/SANT-like DNA-binding domain-containing protein 2 isoform X2
Myb/SANT DNA binding domain containing 2, transcript variant X3
myb/SANT-like DNA-binding domain-containing protein 2 isoform X3
roundabout guidance receptor 3; Derived by automated computational analysis using gene prediction method: Gnomon.
The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins
The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
LOW QUALITY PROTEIN: roundabout homolog 3
roundabout guidance receptor 4; Derived by automated computational analysis using gene prediction method: Gnomon.
The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 2 bases in 1 codon; deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins
The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 2 bases in 1 codon; deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
LOW QUALITY PROTEIN: roundabout homolog 4
hepatic and glial cell adhesion molecule; Derived by automated computational analysis using gene prediction method: Gnomon.
hepatic and glial cell adhesion molecule, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins
hepatic and glial cell adhesion molecule, transcript variant X1
hepatic and glial cell adhesion molecule isoform X2
hepatic and glial cell adhesion molecule isoform X1
coiled-coil domain containing 15; Derived by automated computational analysis using gene prediction method: Gnomon.
coiled-coil domain containing 15, transcript variant X1
coiled-coil domain containing 15, transcript variant X2
coiled-coil domain-containing protein 15 isoform X1
coiled-coil domain-containing protein 15 isoform X2
solute carrier family 37 member 2; Derived by automated computational analysis using gene prediction method: Gnomon.
solute carrier family 37 member 2, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 12 Proteins
solute carrier family 37 member 2, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 long SRA read, 12 Proteins
glucose-6-phosphate exchanger SLC37A2 isoform X2
glucose-6-phosphate exchanger SLC37A2 isoform X1
transmembrane protein 218; Derived by automated computational analysis using gene prediction method: Gnomon.
PBX/knotted 1 homeobox 2; Derived by automated computational analysis using gene prediction method: Gnomon.
PBX/knotted 1 homeobox 2, transcript variant X2
PBX/knotted 1 homeobox 2, transcript variant X1
PBX/knotted 1 homeobox 2, transcript variant X3
fasciculation and elongation protein zeta 1; Derived by automated computational analysis using gene prediction method: Gnomon.
fasciculation and elongation protein zeta 1
fasciculation and elongation protein zeta-1
ubiquitin carboxyl-terminal hydrolase 42-like; Derived by automated computational analysis using gene prediction method: Gnomon.
ubiquitin carboxyl-terminal hydrolase 42-like
zinc finger and BTB domain containing 44; Derived by automated computational analysis using gene prediction method: Gnomon.
zinc finger and BTB domain containing 44, transcript variant X3
zinc finger and BTB domain containing 44, transcript variant X2
zinc finger and BTB domain containing 44, transcript variant X1
zinc finger and BTB domain-containing protein 44 isoform X3
zinc finger and BTB domain-containing protein 44 isoform X2
zinc finger and BTB domain-containing protein 44 isoform X1
zinc finger and BTB domain containing 44, transcript variant X4
zinc finger and BTB domain-containing protein 44 isoform X4
ADAM metallopeptidase with thrombospondin type 1 motif 8; Derived by automated computational analysis using gene prediction method: Gnomon.
ADAM metallopeptidase with thrombospondin type 1 motif 8
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 18 Proteins
A disintegrin and metalloproteinase with thrombospondin motifs 8
ADAM metallopeptidase with thrombospondin type 1 motif 15; Derived by automated computational analysis using gene prediction method: Gnomon.
ADAM metallopeptidase with thrombospondin type 1 motif 15
A disintegrin and metalloproteinase with thrombospondin motifs 15
sorting nexin 19; Derived by automated computational analysis using gene prediction method: Gnomon.
protein CEPU-1; Derived by automated computational analysis using gene prediction method: Gnomon.
opioid-binding protein/cell adhesion molecule homolog; Derived by automated computational analysis using gene prediction method: Gnomon.
opioid-binding protein/cell adhesion molecule homolog, transcript variant X4
opioid-binding protein/cell adhesion molecule homolog, transcript variant X3
opioid-binding protein/cell adhesion molecule homolog, transcript variant X2
opioid-binding protein/cell adhesion molecule homolog, transcript variant X1
opioid-binding protein/cell adhesion molecule homolog, transcript variant X5
opioid-binding protein/cell adhesion molecule homolog isoform X4
opioid-binding protein/cell adhesion molecule homolog isoform X3
opioid-binding protein/cell adhesion molecule homolog isoform X2
opioid-binding protein/cell adhesion molecule homolog isoform X1
opioid-binding protein/cell adhesion molecule homolog isoform X5
immunoglobulin superfamily member 9B; Derived by automated computational analysis using gene prediction method: Gnomon.
immunoglobulin superfamily member 9B, transcript variant X6
immunoglobulin superfamily member 9B, transcript variant X5
immunoglobulin superfamily member 9B, transcript variant X4
immunoglobulin superfamily member 9B, transcript variant X3
immunoglobulin superfamily member 9B, transcript variant X2
immunoglobulin superfamily member 9B, transcript variant X1
immunoglobulin superfamily member 9B, transcript variant X7
immunoglobulin superfamily member 9B, transcript variant X9
immunoglobulin superfamily member 9B, transcript variant X8
junctional adhesion molecule 3; Derived by automated computational analysis using gene prediction method: Gnomon.
non-SMC condensin II complex subunit D3; Derived by automated computational analysis using gene prediction method: Gnomon.
non-SMC condensin II complex subunit D3, transcript variant X3
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins
non-SMC condensin II complex subunit D3, transcript variant X2
non-SMC condensin II complex subunit D3, transcript variant X1
condensin-2 complex subunit D3 isoform X3
condensin-2 complex subunit D3 isoform X2
condensin-2 complex subunit D3 isoform X1
VPS26 retromer complex component B; Derived by automated computational analysis using gene prediction method: Gnomon.
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 31 Proteins
vacuolar protein sorting-associated protein 26B
thymocyte nuclear protein 1; Derived by automated computational analysis using gene prediction method: Gnomon.
acyl-CoA dehydrogenase family member 8; Derived by automated computational analysis using gene prediction method: Gnomon.
isobutyryl-CoA dehydrogenase, mitochondrial
beta-galactosidase-1-like protein 2; Derived by automated computational analysis using gene prediction method: Gnomon.
beta-galactosidase-1-like protein 2, transcript variant X1
beta-galactosidase-1-like protein 2, transcript variant X2
beta-galactosidase-1-like protein 2 isoform X1
beta-galactosidase-1-like protein 2 isoform X2
beta-1,3-glucuronyltransferase 1; Derived by automated computational analysis using gene prediction method: Gnomon.
beta-1,3-glucuronyltransferase 1, transcript variant X5
beta-1,3-glucuronyltransferase 1, transcript variant X4
beta-1,3-glucuronyltransferase 1, transcript variant X3
beta-1,3-glucuronyltransferase 1, transcript variant X2
beta-1,3-glucuronyltransferase 1, transcript variant X1
galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase 1 isoform X3
galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase 1 isoform X2
galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase 1 isoform X1
galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase 1 isoform X4
uncharacterized LOC131093906; Derived by automated computational analysis using gene prediction method: Gnomon.
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 long SRA reads
ATPase H+/K+ transporting non-gastric alpha2 subunit; Derived by automated computational analysis using gene prediction method: Gnomon.
ATPase H+/K+ transporting non-gastric alpha2 subunit
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 43 Proteins
potassium-transporting ATPase alpha chain 2
sodium voltage-gated channel beta subunit 3; Derived by automated computational analysis using gene prediction method: Gnomon.
sodium voltage-gated channel beta subunit 3, transcript variant X2
sodium voltage-gated channel beta subunit 3, transcript variant X1
GRAM domain containing 1B; Derived by automated computational analysis using gene prediction method: Gnomon.
GRAM domain containing 1B, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 16 Proteins
GRAM domain containing 1B, transcript variant X4
GRAM domain containing 1B, transcript variant X2
GRAM domain containing 1B, transcript variant X3
CXADR like membrane protein; Derived by automated computational analysis using gene prediction method: Gnomon.
heat shock protein family A (Hsp70) member 8; Derived by automated computational analysis using gene prediction method: Gnomon.
heat shock protein family A (Hsp70) member 8
small nucleolar RNA SNORD14; Derived by automated computational analysis using gene prediction method: cmsearch.
COORDINATES: nucleotide motif:Rfam:14.6:RF00016
Derived by automated computational analysis using gene prediction method: cmsearch.
brain specific homeobox; Derived by automated computational analysis using gene prediction method: Gnomon.
junctional cadherin complex regulator; Derived by automated computational analysis using gene prediction method: Gnomon.
cytotoxic and regulatory T cell molecule; Derived by automated computational analysis using gene prediction method: Gnomon.
cytotoxic and regulatory T cell molecule
cytotoxic and regulatory T-cell molecule
ubiquitin associated and SH3 domain containing B; Derived by automated computational analysis using gene prediction method: Gnomon.
ubiquitin associated and SH3 domain containing B
ubiquitin-associated and SH3 domain-containing protein B
uncharacterized LOC131093982; Derived by automated computational analysis using gene prediction method: Gnomon.
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 long SRA read
uncharacterized LOC131093961; Derived by automated computational analysis using gene prediction method: Gnomon.
uncharacterized LOC131093970; Derived by automated computational analysis using gene prediction method: Gnomon.
sortilin related receptor 1; Derived by automated computational analysis using gene prediction method: Gnomon.
sortilin related receptor 1, transcript variant X2
sortilin related receptor 1, transcript variant X1
sterol-C5-desaturase; Derived by automated computational analysis using gene prediction method: Gnomon.
tectorin alpha; Derived by automated computational analysis using gene prediction method: Gnomon.
tubulin folding cofactor E like; Derived by automated computational analysis using gene prediction method: Gnomon.
tubulin folding cofactor E like, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 long SRA reads, 13 Proteins
tubulin folding cofactor E like, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 long SRA reads, 12 Proteins
tubulin-specific chaperone cofactor E-like protein
glutamate ionotropic receptor kainate type subunit 4; Derived by automated computational analysis using gene prediction method: Gnomon.
glutamate ionotropic receptor kainate type subunit 4
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 99 Proteins
glutamate receptor ionotropic, kainate 4
Rho guanine nucleotide exchange factor 12; Derived by automated computational analysis using gene prediction method: Gnomon.
Rho guanine nucleotide exchange factor 12, transcript variant X2
Rho guanine nucleotide exchange factor 12, transcript variant X1
Rho guanine nucleotide exchange factor 12, transcript variant X3
Rho guanine nucleotide exchange factor 12, transcript variant X4
rho guanine nucleotide exchange factor 12 isoform X2
rho guanine nucleotide exchange factor 12 isoform X1
rho guanine nucleotide exchange factor 12 isoform X3
TLC domain-containing protein 5-like; Derived by automated computational analysis using gene prediction method: Gnomon.
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins
POU class 2 homeobox 3; Derived by automated computational analysis using gene prediction method: Gnomon.
The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 2 bases in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 18 Proteins
The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 2 bases in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
LOW QUALITY PROTEIN: POU domain, class 2, transcription factor 3
out at first homolog; Derived by automated computational analysis using gene prediction method: Gnomon.
tripartite motif containing 29; Derived by automated computational analysis using gene prediction method: Gnomon.
nectin cell adhesion molecule 1; Derived by automated computational analysis using gene prediction method: Gnomon.
nectin cell adhesion molecule 1, transcript variant X1
nectin cell adhesion molecule 1, transcript variant X3
nectin cell adhesion molecule 1, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 long SRA reads, 20 Proteins
Thy-1 cell surface antigen; Derived by automated computational analysis using gene prediction method: Gnomon.
Thy-1 cell surface antigen, transcript variant X1
Thy-1 cell surface antigen, transcript variant X2
ubiquitin specific peptidase 2; Derived by automated computational analysis using gene prediction method: Gnomon.
ubiquitin specific peptidase 2, transcript variant X1
ubiquitin carboxyl-terminal hydrolase 2 isoform X1
ubiquitin specific peptidase 2, transcript variant X2
ubiquitin carboxyl-terminal hydrolase 2 isoform X2
membrane frizzled-related protein; Derived by automated computational analysis using gene prediction method: Gnomon.
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins
C1q and TNF related 5; Derived by automated computational analysis using gene prediction method: Gnomon.
complement C1q tumor necrosis factor-related protein 5
ring finger protein 26; Derived by automated computational analysis using gene prediction method: Gnomon.
melanoma cell adhesion molecule; Derived by automated computational analysis using gene prediction method: Gnomon.
melanoma cell adhesion molecule, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 long SRA reads, 1 Protein
melanoma cell adhesion molecule, transcript variant X1
melanoma cell adhesion molecule, transcript variant X3
cell surface glycoprotein MUC18 isoform X1
cell surface glycoprotein MUC18 isoform X2
Cbl proto-oncogene; Derived by automated computational analysis using gene prediction method: Gnomon.
NLR family member X1; Derived by automated computational analysis using gene prediction method: Gnomon.
NLR family member X1, transcript variant X3
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 long SRA read, 3 Proteins
NLR family member X1, transcript variant X4
NLR family member X1, transcript variant X5
NLR family member X1, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 long SRA read, 18 Proteins
NLR family member X1, transcript variant X1
ATP binding cassette subfamily G member 4; Derived by automated computational analysis using gene prediction method: Gnomon.
ATP binding cassette subfamily G member 4, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 long SRA read, 9 Proteins
ATP binding cassette subfamily G member 4, transcript variant X2
ATP-binding cassette sub-family G member 4
histone H4 transcription factor; Derived by automated computational analysis using gene prediction method: Gnomon.
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 long SRA reads, 9 Proteins
POU class 2 homeobox associating factor 2; Derived by automated computational analysis using gene prediction method: Gnomon.
POU class 2 homeobox associating factor 2
POU class 2 homeobox associating factor 1; Derived by automated computational analysis using gene prediction method: Gnomon.
POU class 2 homeobox associating factor 1
BTG anti-proliferation factor 4; Derived by automated computational analysis using gene prediction method: Gnomon.
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 14 Proteins
layilin; Derived by automated computational analysis using gene prediction method: Gnomon.
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 15 Proteins
salt inducible kinase 2; Derived by automated computational analysis using gene prediction method: Gnomon.
ALG9 alpha-1,2-mannosyltransferase; Derived by automated computational analysis using gene prediction method: Gnomon.
The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 2 bases in 1 codon
LOW QUALITY PROTEIN: alpha-1,2-mannosyltransferase ALG9
ferredoxin-fold anticodon binding domain containing 1; Derived by automated computational analysis using gene prediction method: Gnomon.
ferredoxin-fold anticodon binding domain containing 1
ferredoxin-fold anticodon-binding domain-containing protein 1
crystallin alpha B; Derived by automated computational analysis using gene prediction method: Gnomon.
heat shock protein family B (small) member 2; Derived by automated computational analysis using gene prediction method: Gnomon.
heat shock protein family B (small) member 2
chromosome 27 C11orf52 homolog; Derived by automated computational analysis using gene prediction method: Gnomon.
uncharacterized protein C11orf52 homolog
DIX domain containing 1; Derived by automated computational analysis using gene prediction method: Gnomon.
DIX domain containing 1, transcript variant X2
DIX domain containing 1, transcript variant X1
DIX domain containing 1, transcript variant X3
DIX domain containing 1, transcript variant X4
DIX domain containing 1, transcript variant X5
DIX domain containing 1, transcript variant X6
dihydrolipoamide S-acetyltransferase; Derived by automated computational analysis using gene prediction method: Gnomon.
dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex, mitochondrial
NKAP domain containing 1; Derived by automated computational analysis using gene prediction method: Gnomon.
NKAP domain containing 1, transcript variant X1
NKAP domain containing 1, transcript variant X2
uncharacterized protein NKAPD1 isoform X1
uncharacterized protein NKAPD1 isoform X2
succinate dehydrogenase complex subunit D; Derived by automated computational analysis using gene prediction method: Gnomon.
succinate dehydrogenase complex subunit D
succinate dehydrogenase [ubiquinone] cytochrome b small subunit, mitochondrial
interleukin 18; Derived by automated computational analysis using gene prediction method: Gnomon.
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 13 Proteins
testis expressed 12; Derived by automated computational analysis using gene prediction method: Gnomon.
beta-carotene oxygenase 2; Derived by automated computational analysis using gene prediction method: Gnomon.
beta-carotene oxygenase 2, transcript variant X2
beta-carotene oxygenase 2, transcript variant X1
carotenoid-cleaving dioxygenase, mitochondrial isoform X2
carotenoid-cleaving dioxygenase, mitochondrial isoform X1
6-pyruvoyltetrahydropterin synthase; Derived by automated computational analysis using gene prediction method: Gnomon.
neural cell adhesion molecule 1; Derived by automated computational analysis using gene prediction method: Gnomon.
neural cell adhesion molecule 1, transcript variant X1
neural cell adhesion molecule 1, transcript variant X5
neural cell adhesion molecule 1, transcript variant X2
neural cell adhesion molecule 1, transcript variant X8
neural cell adhesion molecule 1, transcript variant X3
neural cell adhesion molecule 1, transcript variant X4
neural cell adhesion molecule 1, transcript variant X9
neural cell adhesion molecule 1, transcript variant X6
neural cell adhesion molecule 1, transcript variant X10
neural cell adhesion molecule 1, transcript variant X7
neural cell adhesion molecule 1 isoform X1
neural cell adhesion molecule 1 isoform X5
neural cell adhesion molecule 1 isoform X2
neural cell adhesion molecule 1 isoform X8
neural cell adhesion molecule 1 isoform X3
neural cell adhesion molecule 1 isoform X4
neural cell adhesion molecule 1 isoform X9
neural cell adhesion molecule 1 isoform X6
neural cell adhesion molecule 1 isoform X10
neural cell adhesion molecule 1 isoform X7
uncharacterized LOC131093900; Derived by automated computational analysis using gene prediction method: Gnomon.
tetratricopeptide repeat domain 12; Derived by automated computational analysis using gene prediction method: Gnomon.
tetratricopeptide repeat domain 12, transcript variant X3
tetratricopeptide repeat domain 12, transcript variant X2
tetratricopeptide repeat domain 12, transcript variant X5
tetratricopeptide repeat domain 12, transcript variant X1
tetratricopeptide repeat domain 12, transcript variant X4
tetratricopeptide repeat domain 12, transcript variant X6
tetratricopeptide repeat domain 12, transcript variant X8
tetratricopeptide repeat domain 12, transcript variant X7
tetratricopeptide repeat domain 12, transcript variant X10
tetratricopeptide repeat domain 12, transcript variant X9
tetratricopeptide repeat domain 12, transcript variant X11
tetratricopeptide repeat protein 12 isoform X3
tetratricopeptide repeat protein 12 isoform X2
tetratricopeptide repeat protein 12 isoform X5
tetratricopeptide repeat protein 12 isoform X1
tetratricopeptide repeat protein 12 isoform X4
tetratricopeptide repeat protein 12 isoform X6
tetratricopeptide repeat protein 12 isoform X7
tetratricopeptide repeat protein 12 isoform X8
tetratricopeptide repeat protein 12 isoform X9
ankyrin repeat and kinase domain containing 1; Derived by automated computational analysis using gene prediction method: Gnomon.
ankyrin repeat and kinase domain containing 1
ankyrin repeat and protein kinase domain-containing protein 1
dopamine receptor D2; Derived by automated computational analysis using gene prediction method: Gnomon.
dopamine receptor D2, transcript variant X3
dopamine receptor D2, transcript variant X2
dopamine receptor D2, transcript variant X1
zw10 kinetochore protein; Derived by automated computational analysis using gene prediction method: Gnomon.
centromere/kinetochore protein zw10 homolog
T-cell surface glycoprotein CD3 gamma chain-like; Derived by automated computational analysis using gene prediction method: Gnomon.
T-cell surface glycoprotein CD3 gamma chain-like, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 long SRA read, 5 Proteins
T-cell surface glycoprotein CD3 gamma chain-like, transcript variant X1
T-cell surface glycoprotein CD3 gamma chain-like isoform X1
T-cell surface glycoprotein CD3 gamma chain-like isoform X2
T-cell surface glycoprotein CD3 gamma chain-like, transcript variant X3
T-cell surface glycoprotein CD3 gamma chain-like isoform X3
T-cell surface glycoprotein CD3 epsilon chain; Derived by automated computational analysis using gene prediction method: Gnomon.
T-cell surface glycoprotein CD3 epsilon chain
myelin protein zero like 2; Derived by automated computational analysis using gene prediction method: Gnomon.
myelin protein zero-like protein 3; Derived by automated computational analysis using gene prediction method: Gnomon.
sodium voltage-gated channel beta subunit 2; Derived by automated computational analysis using gene prediction method: Gnomon.
sodium voltage-gated channel beta subunit 2, transcript variant X1
sodium channel subunit beta-2 isoform X1
sodium voltage-gated channel beta subunit 2, transcript variant X2
sodium channel subunit beta-2 isoform X2
sodium voltage-gated channel beta subunit 4; Derived by automated computational analysis using gene prediction method: Gnomon.
sodium voltage-gated channel beta subunit 4
transmembrane serine protease 4; Derived by automated computational analysis using gene prediction method: Gnomon.
The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: deleted 2 bases in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 27 Proteins
The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: deleted 2 bases in 1 codon; substituted 1 base at 1 genomic stop codon; Derived by automated computational analysis using gene prediction method: Gnomon.
LOW QUALITY PROTEIN: transmembrane protease serine 4
small integral membrane protein 35; Derived by automated computational analysis using gene prediction method: Gnomon.
interleukin 10 receptor subunit alpha; Derived by automated computational analysis using gene prediction method: Gnomon.
transmembrane serine protease 13; Derived by automated computational analysis using gene prediction method: Gnomon.
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 17 Proteins
uncharacterized LOC131093812; Derived by automated computational analysis using gene prediction method: Gnomon.
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 long SRA reads, 11 Proteins
DS cell adhesion molecule like 1; Derived by automated computational analysis using gene prediction method: Gnomon.
centrosomal protein 164; Derived by automated computational analysis using gene prediction method: Gnomon.
centrosomal protein 164, transcript variant X3
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 long SRA reads, 1 Protein
centrosomal protein 164, transcript variant X2
centrosomal protein 164, transcript variant X5
centrosomal protein 164, transcript variant X4
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 long SRA reads, 2 Proteins
centrosomal protein 164, transcript variant X1
centrosomal protein of 164 kDa isoform X4
centrosomal protein of 164 kDa isoform X3
centrosomal protein of 164 kDa isoform X1
centrosomal protein of 164 kDa isoform X2
beta-secretase 1; Derived by automated computational analysis using gene prediction method: Gnomon.
ring finger protein 214; Derived by automated computational analysis using gene prediction method: Gnomon.
proprotein convertase subtilisin/kexin type 7; Derived by automated computational analysis using gene prediction method: Gnomon.
proprotein convertase subtilisin/kexin type 7, transcript variant X2
proprotein convertase subtilisin/kexin type 7, transcript variant X4
proprotein convertase subtilisin/kexin type 7, transcript variant X1
proprotein convertase subtilisin/kexin type 7, transcript variant X3
proprotein convertase subtilisin/kexin type 7 isoform X1
proprotein convertase subtilisin/kexin type 7 isoform X2
transgelin; Derived by automated computational analysis using gene prediction method: Gnomon.
SID1 transmembrane family member 2; Derived by automated computational analysis using gene prediction method: Gnomon.
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 long SRA reads, 8 Proteins
platelet activating factor acetylhydrolase 1b catalytic subunit 2; Derived by automated computational analysis using gene prediction method: Gnomon.
platelet activating factor acetylhydrolase 1b catalytic subunit 2
platelet-activating factor acetylhydrolase IB subunit alpha2
SIK family kinase 3; Derived by automated computational analysis using gene prediction method: Gnomon.
SIK family kinase 3, transcript variant X3
SIK family kinase 3, transcript variant X4
SIK family kinase 3, transcript variant X2
SIK family kinase 3, transcript variant X1
serine/threonine-protein kinase SIK3 isoform X2
serine/threonine-protein kinase SIK3 isoform X1
serine/threonine-protein kinase SIK3 isoform X3
serine/threonine-protein kinase SIK3 isoform X4
apolipoprotein A1; Derived by automated computational analysis using gene prediction method: Gnomon.
apolipoprotein A4; Derived by automated computational analysis using gene prediction method: Gnomon.
apolipoprotein A5; Derived by automated computational analysis using gene prediction method: Gnomon.
ZPR1 zinc finger; Derived by automated computational analysis using gene prediction method: Gnomon.
BUD13 homolog; Derived by automated computational analysis using gene prediction method: Gnomon.
cell adhesion molecule 1; Derived by automated computational analysis using gene prediction method: Gnomon.
cell adhesion molecule 1, transcript variant X1
cell adhesion molecule 1, transcript variant X3
cell adhesion molecule 1, transcript variant X4
cell adhesion molecule 1, transcript variant X6
cell adhesion molecule 1, transcript variant X2
cell adhesion molecule 1, transcript variant X5
cell adhesion molecule 1, transcript variant X7
cell adhesion molecule 1, transcript variant X8
uncharacterized LOC131093817; Derived by automated computational analysis using gene prediction method: Gnomon.
RNA exonuclease 2; Derived by automated computational analysis using gene prediction method: Gnomon.
RNA binding motif protein 7; Derived by automated computational analysis using gene prediction method: Gnomon.
zinc finger and BTB domain containing 16; Derived by automated computational analysis using gene prediction method: Gnomon.
zinc finger and BTB domain containing 16, transcript variant X3
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 long SRA reads, 15 Proteins
zinc finger and BTB domain containing 16, transcript variant X2
zinc finger and BTB domain containing 16, transcript variant X1
zinc finger and BTB domain-containing protein 16
5-hydroxytryptamine receptor 3A-like; Derived by automated computational analysis using gene prediction method: Gnomon.
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 19 Proteins
period circadian protein-like; Derived by automated computational analysis using gene prediction method: Gnomon.
ubiquitin specific peptidase 28; Derived by automated computational analysis using gene prediction method: Gnomon.
ubiquitin specific peptidase 28, transcript variant X1
ubiquitin specific peptidase 28, transcript variant X2
ubiquitin carboxyl-terminal hydrolase 28 isoform X2
ubiquitin carboxyl-terminal hydrolase 28 isoform X1
ubiquitin specific peptidase 28, transcript variant X3
ubiquitin carboxyl-terminal hydrolase 28 isoform X3
claudin 25; Derived by automated computational analysis using gene prediction method: Gnomon.
G protein-activated inward rectifier potassium channel 4-like; Derived by automated computational analysis using gene prediction method: Gnomon.
G protein-activated inward rectifier potassium channel 4-like
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 36 Proteins
ubiquitination factor E4A; Derived by automated computational analysis using gene prediction method: Gnomon.
ATP synthase membrane subunit g; Derived by automated computational analysis using gene prediction method: Gnomon.
lysine methyltransferase 2A; Derived by automated computational analysis using gene prediction method: Gnomon.
lysine methyltransferase 2A, transcript variant X1
histone-lysine N-methyltransferase 2A isoform X1
lysine methyltransferase 2A, transcript variant X2
histone-lysine N-methyltransferase 2A isoform X2
tetratricopeptide repeat domain 36; Derived by automated computational analysis using gene prediction method: Gnomon.
tetratricopeptide repeat domain 36, transcript variant X2
tetratricopeptide repeat domain 36, transcript variant X3
tetratricopeptide repeat protein 36 isoform X2
tetratricopeptide repeat protein 36 isoform X3
tetratricopeptide repeat domain 36, transcript variant X1
tetratricopeptide repeat protein 36 isoform X1
transmembrane protein 25; Derived by automated computational analysis using gene prediction method: Gnomon.
transmembrane protein 25, transcript variant X2
transmembrane protein 25, transcript variant X3
transmembrane protein 25, transcript variant X1
intraflagellar transport 46; Derived by automated computational analysis using gene prediction method: Gnomon.
intraflagellar transport protein 46 homolog
archain 1; Derived by automated computational analysis using gene prediction method: Gnomon.
pleckstrin homology like domain family B member 1; Derived by automated computational analysis using gene prediction method: Gnomon.
pleckstrin homology like domain family B member 1
pleckstrin homology-like domain family B member 1
hypoxia up-regulated 1; Derived by automated computational analysis using gene prediction method: Gnomon.
solute carrier family 37 member 4; Derived by automated computational analysis using gene prediction method: Gnomon.
solute carrier family 37 member 4, transcript variant X1
solute carrier family 37 member 4, transcript variant X2
glucose-6-phosphate exchanger SLC37A4 isoform X1
glucose-6-phosphate exchanger SLC37A4 isoform X2
trafficking protein particle complex subunit 4; Derived by automated computational analysis using gene prediction method: Gnomon.
trafficking protein particle complex subunit 4
ribosomal protein S25; Derived by automated computational analysis using gene prediction method: Gnomon.
centrosomal AT-AC splicing factor; Derived by automated computational analysis using gene prediction method: Gnomon.
BCL9 like; Derived by automated computational analysis using gene prediction method: Gnomon.
B-cell CLL/lymphoma 9-like protein isoform X3
B-cell CLL/lymphoma 9-like protein isoform X1
B-cell CLL/lymphoma 9-like protein isoform X2
C-X-C motif chemokine receptor 5; Derived by automated computational analysis using gene prediction method: Gnomon.
DEAD-box helicase 6; Derived by automated computational analysis using gene prediction method: Gnomon.
probable ATP-dependent RNA helicase DDX6
VPS11 core subunit of CORVET and HOPS complexes; Derived by automated computational analysis using gene prediction method: Gnomon.
VPS11 core subunit of CORVET and HOPS complexes
vacuolar protein sorting-associated protein 11 homolog
hydroxymethylbilane synthase; Derived by automated computational analysis using gene prediction method: Gnomon.
hydroxymethylbilane synthase, transcript variant X1
hydroxymethylbilane synthase, transcript variant X2
histone H2A; Derived by automated computational analysis using gene prediction method: Gnomon.
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 92 Proteins
dolichyl-phosphate N-acetylglucosaminephosphotransferase 1; Derived by automated computational analysis using gene prediction method: Gnomon.
dolichyl-phosphate N-acetylglucosaminephosphotransferase 1, transcript variant X2
dolichyl-phosphate N-acetylglucosaminephosphotransferase 1, transcript variant X1
dolichyl-phosphate N-acetylglucosaminephosphotransferase 1, transcript variant X3
UDP-N-acetylglucosamine--dolichyl-phosphate N-acetylglucosaminephosphotransferase isoform X2
UDP-N-acetylglucosamine--dolichyl-phosphate N-acetylglucosaminephosphotransferase isoform X1
UDP-N-acetylglucosamine--dolichyl-phosphate N-acetylglucosaminephosphotransferase isoform X3
C2CD2 like; Derived by automated computational analysis using gene prediction method: Gnomon.
phospholipid transfer protein C2CD2L isoform X5
phospholipid transfer protein C2CD2L isoform X6
phospholipid transfer protein C2CD2L isoform X1
phospholipid transfer protein C2CD2L isoform X3
phospholipid transfer protein C2CD2L isoform X2
phospholipid transfer protein C2CD2L isoform X4
phospholipid transfer protein C2CD2L isoform X7
uncharacterized LOC131093858; Derived by automated computational analysis using gene prediction method: Gnomon.
uncharacterized LOC131093858, transcript variant X2
uncharacterized LOC131093858, transcript variant X1
uncharacterized LOC131093858, transcript variant X3
uncharacterized LOC131093922; Derived by automated computational analysis using gene prediction method: Gnomon.
uncharacterized LOC131093922, transcript variant X1
uncharacterized LOC131093922, transcript variant X2
uncharacterized LOC131093897; Derived by automated computational analysis using gene prediction method: Gnomon.
uncharacterized LOC131093897, transcript variant X1
uncharacterized LOC131093897, transcript variant X2
uncharacterized LOC131093916; Derived by automated computational analysis using gene prediction method: Gnomon.