Marinitoga piezophila KA3, complete sequence.
Bacteria; Thermotogota; Thermotogae; Petrotogales; Petrotogaceae; Marinitoga.
Complete genome sequence of the thermophilic, piezophilic, heterotrophic bacterium Marinitoga piezophila KA3
Submitted (06-JAN-2012) US DOE Joint Genome Institute, 2800 Mitchell Drive B310, Walnut Creek, CA 94598-1698, USA
REFSEQ INFORMATION: The reference sequence is identical to\nCP003257.1.\nURL -- http://www.jgi.doe.gov\nJGI Project ID: 4091984\nSource DNA and organism available from Kenneth Noll\n(noll@uconn.edu)\nContacts: Kenneth Noll (noll@uconn.edu)\n Tanja Woyke (microbe@cuba.jgi-psf.org)\nAnnotation done by JGI-ORNL and JGI-PGF\nFinishing done by JGI-LANL\nThe JGI and collaborators endorse the principles for the\ndistribution and use of large scale sequencing data adopted by the\nlarger genome sequencing community and urge users of this data to\nfollow them. it is our intention to publish the work of this\nproject in a timely fashion and we welcome collaborative\ninteraction on the project and analysis.\n(http://www.genome.gov/page.cfm?pageID=10506376).\nThe annotation was added by the NCBI Prokaryotic Genome Annotation\nPipeline (PGAP). Information about PGAP can be found here:\nhttps://www.ncbi.nlm.nih.gov/genome/annotation_prok/\n\n##MIGS-Data-START##\ninvestigation_type :: bacteria_archaea\nproject_name :: Marinitoga piezophila KA3\ncollection_date :: Missing\nlat_lon :: 12.13333 -103.93333\ndepth :: 2630 meters\nalt_elev :: Missing\ncountry :: Pacific Ocean\nenvironment :: Deep sea, Hydrothermal vent, Marine\nnum_replicons :: 2\nref_biomaterial :: DSM 14283, JCM 11233\nbiotic_relationship :: Free living\ntrophic_level :: Chemoorganotroph\nrel_to_oxygen :: Anaerobe\nisol_growth_condt :: Missing\nsequencing_meth :: WGS\nassembly :: Newbler v. 2.3 (pre-release)\nfinishing_strategy :: Finished\nGOLD Stamp ID :: Gi09135\nType Strain :: Yes\nFunding Program :: DOE-CSP 2010\nGene Calling Method :: Prodigal 1.4, GenePRIMP\nIsolation Site :: deep-sea hydrothermal vent chimney at a\n depth of 2630 meters on the East-Pacific\n Rise\nCell Shape :: Rod-shaped\nMotility :: Motile\nSporulation :: Nonsporulating\nTemperature Range :: Thermophile\nTemperature Optimum :: 65C\nGram Staining :: Gram-\nDiseases :: None\nPhenotypes :: Piezophile\n##MIGS-Data-END##\n\n##Genome-Assembly-Data-START##\nFinishing Goal :: Finished\nCurrent Finishing Status :: Finished\nAssembly Method :: Newbler v. 2.3\nGenome Coverage :: 30x\nSequencing Technology :: 454/Illumina\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI RefSeq\nAnnotation Date :: 02/22/2023 14:11:02\nAnnotation Pipeline :: NCBI Prokaryotic Genome\n Annotation Pipeline (PGAP)\nAnnotation Method :: Best-placed reference protein\n set; GeneMarkS-2+\nAnnotation Software revision :: 6.4\nFeatures Annotated :: Gene; CDS; rRNA; tRNA; ncRNA\nGenes (total) :: 2,122\nCDSs (total) :: 2,059\nGenes (coding) :: 2,051\nCDSs (with protein) :: 2,051\nGenes (RNA) :: 63\nrRNAs :: 3, 3, 3 (5S, 16S, 23S)\ncomplete rRNAs :: 3, 3, 3 (5S, 16S, 23S)\ntRNAs :: 51\nncRNAs :: 3\nPseudo Genes (total) :: 8\nCDSs (without protein) :: 8\nPseudo Genes (ambiguous residues) :: 0 of 8\nPseudo Genes (frameshifted) :: 4 of 8\nPseudo Genes (incomplete) :: 3 of 8\nPseudo Genes (internal stop) :: 1 of 8\nCRISPR Arrays :: 5\n##Genome-Annotation-Data-END##\nCOMPLETENESS: full length.
deep-sea hydrothermal vent chimney at a depth of 2630 meters on the East-Pacific Rise
COORDINATES: similar to AA sequence:RefSeq:WP_012207857.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0003677 - DNA binding [Evidence IEA]; GO:0003688 - DNA replication origin binding [Evidence IEA]
GO:0006270 - DNA replication initiation [Evidence IEA]; GO:0006275 - regulation of DNA replication [Evidence IEA]
Derived by automated computational analysis using gene prediction method: Protein Homology.
chromosomal replication initiator protein DnaA
COORDINATES: similar to AA sequence:RefSeq:WP_012208339.1
GO:0033744 - L-methionine:thioredoxin-disulfide S-oxidoreductase activity [Evidence IEA]; GO:0008113 - peptide-methionine (S)-S-oxide reductase activity [Evidence IEA]
GO:0030091 - protein repair [Evidence IEA]; GO:0006979 - response to oxidative stress [Evidence IEA]
peptide-methionine (S)-S-oxide reductase MsrA
COORDINATES: protein motif:HMM:NF013077.2
COORDINATES: ab initio prediction:GeneMarkS-2+
Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
COORDINATES: similar to AA sequence:RefSeq:WP_012208992.1
GO:0043737 - deoxyribonuclease V activity [Evidence IEA]; GO:0000287 - magnesium ion binding [Evidence IEA]
COORDINATES: protein motif:HMM:NF014588.2
GO:0008685 - 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase activity [Evidence IEA]
GO:0019288 - isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway [Evidence IEA]
2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase
COORDINATES: protein motif:HMM:TIGR00663.1
GO:0009360 - DNA polymerase III complex [Evidence IEA]
GO:0003887 - DNA-directed DNA polymerase activity [Evidence IEA]
GO:0006260 - DNA replication [Evidence IEA]
COORDINATES: protein motif:HMM:NF015000.2
GO:0008081 - phosphoric diester hydrolase activity [Evidence IEA]
GO:0006629 - lipid metabolic process [Evidence IEA]
glycerophosphodiester phosphodiesterase family protein
COORDINATES: protein motif:HMM:NF014912.2
GO:0046872 - metal ion binding [Evidence IEA]; GO:0016491 - oxidoreductase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012208076.1
COORDINATES: similar to AA sequence:RefSeq:WP_012208671.1
COORDINATES: protein motif:HMM:NF019318.2
COORDINATES: similar to AA sequence:RefSeq:WP_012208673.1
GO:0046872 - metal ion binding [Evidence IEA]; GO:0004540 - ribonuclease activity [Evidence IEA]
GO:0042254 - ribosome biogenesis [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012208674.1
COORDINATES: protein motif:HMM:TIGR00816.1
tellurite-resistance/dicarboxylate transporter
COORDINATES: protein motif:HMM:NF033788.1
metalloregulator ArsR/SmtB family transcription factor
COORDINATES: protein motif:HMM:NF013379.2
COORDINATES: protein motif:HMM:NF016064.2
COORDINATES: protein motif:HMM:NF012790.2
rhodanese-like domain-containing protein
COORDINATES: protein motif:HMM:NF014672.2
COORDINATES: protein motif:HMM:TIGR03011.1
GO:0016782 - transferase activity, transferring sulphur-containing groups [Evidence IEA]
GO:0002098 - tRNA wobble uridine modification [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012208666.1
GO:0004148 - dihydrolipoyl dehydrogenase activity [Evidence IEA]
GO:0045454 - cell redox homeostasis [Evidence IEA]; GO:0051068 - dihydrolipoamide metabolic process [Evidence IEA]; GO:0006096 - glycolytic process [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00230.1
GO:0000023 - maltose metabolic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF014069.2
COORDINATES: protein motif:HMM:NF019928.2
COORDINATES: similar to AA sequence:RefSeq:WP_012208016.1
GO:0016829 - lyase activity [Evidence IEA]
GO:0006520 - amino acid metabolic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF012514.2
GO:0016787 - hydrolase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012209602.1
GlmL-related ornithine degradation protein
COORDINATES: similar to AA sequence:RefSeq:WP_012209603.1
GO:0004069 - L-aspartate:2-oxoglutarate aminotransferase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012207911.1
GO:0008760 - UDP-N-acetylglucosamine 1-carboxyvinyltransferase activity [Evidence IEA]
GO:0009252 - peptidoglycan biosynthetic process [Evidence IEA]
UDP-N-acetylglucosamine 1-carboxyvinyltransferase
COORDINATES: protein motif:HMM:NF013180.2
COORDINATES: protein motif:HMM:TIGR00099.1
GO:0008152 - metabolic process [Evidence IEA]
Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
COORDINATES: protein motif:HMM:NF024117.2
COORDINATES: protein motif:HMM:TIGR00376.1
GO:0003678 - DNA helicase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012208862.1
GO:0004315 - 3-oxoacyl-[acyl-carrier-protein] synthase activity [Evidence IEA]
GO:0006633 - fatty acid biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012208861.1
COORDINATES: similar to AA sequence:RefSeq:WP_012208860.1
COORDINATES: protein motif:HMM:NF020130.2
3-oxoacyl-[acyl-carrier-protein] synthase III C-terminal domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_012208859.1
GO:0018580 - nitronate monooxygenase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012208858.1
GO:0004314 - [acyl-carrier-protein] S-malonyltransferase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF009676.0
GO:0030163 - protein catabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014296744.1
Rpn family recombination-promoting nuclease/putative transposase
COORDINATES: protein motif:HMM:NF009239.0
GO:0003849 - 3-deoxy-7-phosphoheptulonate synthase activity [Evidence IEA]
GO:0009423 - chorismate biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF012497.2
GO:0003866 - 3-phosphoshikimate 1-carboxyvinyltransferase activity [Evidence IEA]
3-phosphoshikimate 1-carboxyvinyltransferase
COORDINATES: protein motif:HMM:NF024258.2
COORDINATES: protein motif:HMM:NF024573.2
COORDINATES: protein motif:HMM:NF024753.2
PQQ-binding-like beta-propeller repeat protein
COORDINATES: similar to AA sequence:RefSeq:WP_016291501.1
GO:0003999 - adenine phosphoribosyltransferase activity [Evidence IEA]
GO:0009116 - nucleoside metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012208886.1
COORDINATES: protein motif:HMM:NF024587.2
GO:0004140 - dephospho-CoA kinase activity [Evidence IEA]
GO:0015937 - coenzyme A biosynthetic process [Evidence IEA]
Dephospho-CoA kinase (CoaE) performs the final step in coenzyme A biosynthesis; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_012208888.1
ABC transporter substrate-binding protein
COORDINATES: protein motif:HMM:NF012655.2
TetR/AcrR family transcriptional regulator
COORDINATES: protein motif:HMM:NF013543.2
COORDINATES: protein motif:HMM:NF013982.2
COORDINATES: protein motif:HMM:NF017076.2
adenylate/guanylate cyclase domain-containing protein
COORDINATES: protein motif:HMM:NF023178.2
COORDINATES: protein motif:HMM:NF016648.2
COORDINATES: protein motif:HMM:NF024883.2
COORDINATES: protein motif:HMM:NF004046.0
GO:0005524 - ATP binding [Evidence IEA]; GO:0003677 - DNA binding [Evidence IEA]; GO:0003887 - DNA-directed DNA polymerase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF012745.2
COORDINATES: similar to AA sequence:RefSeq:WP_012208454.1
GO:0008135 - translation factor activity, RNA binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012208455.1
GO:0016765 - transferase activity, transferring alkyl or aryl (other than methyl) groups [Evidence IEA]
COORDINATES: protein motif:HMM:NF013327.2
COORDINATES: similar to AA sequence:RefSeq:WP_012208458.1
GO:0004813 - alanine-tRNA ligase activity [Evidence IEA]
GO:0006419 - alanyl-tRNA aminoacylation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012209344.1
COORDINATES: protein motif:HMM:TIGR00135.1
GO:0030956 - glutamyl-tRNA(Gln) amidotransferase complex [Evidence IEA]
GO:0050567 - glutaminyl-tRNA synthase (glutamine-hydrolyzing) activity [Evidence IEA]
GO:0006424 - glutamyl-tRNA aminoacylation [Evidence IEA]
Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatC
COORDINATES: protein motif:HMM:NF009150.0
GO:0004518 - nuclease activity [Evidence IEA]; GO:0003676 - nucleic acid binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012209643.1
COORDINATES: similar to AA sequence:RefSeq:WP_012209645.1
GO:0009982 - pseudouridine synthase activity [Evidence IEA]
GO:0006400 - tRNA modification [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012208949.1
COORDINATES: similar to AA sequence:RefSeq:WP_012208950.1
methionine ABC transporter ATP-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_012208951.1
MetQ/NlpA family ABC transporter substrate-binding protein
COORDINATES: protein motif:HMM:TIGR02473.1
GO:0009288 - bacterial-type flagellum [Evidence IEA]; GO:0016020 - membrane [Evidence IEA]
GO:0003774 - cytoskeletal motor activity [Evidence IEA]
GO:0071973 - bacterial-type flagellum-dependent cell motility [Evidence IEA]; GO:0006935 - chemotaxis [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012209735.1
sigma-54-dependent Fis family transcriptional regulator
COORDINATES: similar to AA sequence:RefSeq:WP_012209733.1
COORDINATES: similar to AA sequence:RefSeq:WP_012208857.1
GO:0004316 - 3-oxoacyl-[acyl-carrier-protein] reductase (NADPH) activity [Evidence IEA]
3-oxoacyl-[acyl-carrier-protein] reductase
COORDINATES: similar to AA sequence:RefSeq:WP_012209717.1
bifunctional (p)ppGpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase
COORDINATES: similar to AA sequence:RefSeq:WP_012209718.1
GO:0004045 - aminoacyl-tRNA hydrolase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012209719.1
COORDINATES: similar to AA sequence:RefSeq:WP_012207933.1
GO:0008408 - 3'-5' exonuclease activity [Evidence IEA]; GO:0003677 - DNA binding [Evidence IEA]; GO:0003887 - DNA-directed DNA polymerase activity [Evidence IEA]; GO:0003676 - nucleic acid binding [Evidence IEA]
GO:0006261 - DNA-templated DNA replication [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012207890.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0008186 - ATP-dependent activity, acting on RNA [Evidence IEA]; GO:0003723 - RNA binding [Evidence IEA]
GO:0006353 - DNA-templated transcription termination [Evidence IEA]
COORDINATES: protein motif:HMM:NF023568.2
COORDINATES: similar to AA sequence:RefSeq:WP_014296987.1
COORDINATES: similar to AA sequence:RefSeq:WP_012208585.1
COORDINATES: similar to AA sequence:RefSeq:WP_012208587.1
GO:1904047 - S-adenosyl-L-methionine binding [Evidence IEA]
This family includes YhcC from E. coli K-12, an uncharacterized radical SAM protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: nucleotide motif:Rfam:14.4:RF00010
Derived by automated computational analysis using gene prediction method: cmsearch.
COORDINATES: similar to AA sequence:RefSeq:WP_012209423.1
COORDINATES: similar to AA sequence:RefSeq:WP_012209422.1
COORDINATES: protein motif:HMM:TIGR03959.1
COORDINATES: similar to AA sequence:RefSeq:WP_012209650.1
GO:0051539 - 4 iron, 4 sulfur cluster binding [Evidence IEA]; GO:1904047 - S-adenosyl-L-methionine binding [Evidence IEA]
[FeFe] hydrogenase H-cluster radical SAM maturase HydG
COORDINATES: protein motif:HMM:TIGR03956.1
[FeFe] hydrogenase H-cluster radical SAM maturase HydE
COORDINATES: similar to AA sequence:RefSeq:WP_012209648.1
[FeFe] hydrogenase H-cluster maturation GTPase HydF
COORDINATES: protein motif:HMM:NF008909.0
COORDINATES: protein motif:HMM:NF015983.2
COORDINATES: similar to AA sequence:RefSeq:WP_012209248.1
GO:0008150 - biological_process [Evidence IEA]
YbaB/EbfC family nucleoid-associated protein
COORDINATES: similar to AA sequence:RefSeq:WP_011897301.1
GO:0006094 - gluconeogenesis [Evidence IEA]; GO:0019682 - glyceraldehyde-3-phosphate metabolic process [Evidence IEA]; GO:0006096 - glycolytic process [Evidence IEA]
type I glyceraldehyde-3-phosphate dehydrogenase
COORDINATES: similar to AA sequence:RefSeq:WP_012209246.1
GO:0004807 - triose-phosphate isomerase activity [Evidence IEA]
GO:0006096 - glycolytic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014297076.1
COORDINATES: protein motif:HMM:NF012235.2
COORDINATES: protein motif:HMM:NF024110.2
COORDINATES: protein motif:HMM:TIGR00046.1
COORDINATES: similar to AA sequence:RefSeq:WP_012207958.1
GO:0004828 - serine-tRNA ligase activity [Evidence IEA]
GO:0006434 - seryl-tRNA aminoacylation [Evidence IEA]
COORDINATES: protein motif:HMM:NF015901.2
patatin-like phospholipase family protein
COORDINATES: protein motif:HMM:NF013862.2
COORDINATES: protein motif:HMM:NF019911.2
COORDINATES: similar to AA sequence:RefSeq:WP_012207871.1
COORDINATES: protein motif:HMM:NF021506.2
COORDINATES: protein motif:HMM:TIGR00479.1
GO:0008649 - rRNA methyltransferase activity [Evidence IEA]
23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD
COORDINATES: similar to AA sequence:RefSeq:WP_012209657.1
COORDINATES: protein motif:HMM:NF012920.2
COORDINATES: similar to AA sequence:RefSeq:WP_012208198.1
COORDINATES: protein motif:HMM:NF016005.2
COORDINATES: similar to AA sequence:RefSeq:WP_012208201.1
GO:0004830 - tryptophan-tRNA ligase activity [Evidence IEA]
GO:0006436 - tryptophanyl-tRNA aminoacylation [Evidence IEA]
COORDINATES: protein motif:HMM:NF027563.2
COORDINATES: similar to AA sequence:RefSeq:WP_012209698.1
GO:0004375 - glycine dehydrogenase (decarboxylating) activity [Evidence IEA]
GO:0006546 - glycine catabolic process [Evidence IEA]
aminomethyl-transferring glycine dehydrogenase subunit GcvPB
COORDINATES: similar to AA sequence:RefSeq:WP_012209697.1
aminomethyl-transferring glycine dehydrogenase subunit GcvPA
COORDINATES: similar to AA sequence:RefSeq:WP_012208095.1
GO:0003824 - catalytic activity [Evidence IEA]
GO:0019464 - glycine decarboxylation via glycine cleavage system [Evidence IEA]
COORDINATES: protein motif:HMM:NF001567.0
GO:0004047 - aminomethyltransferase activity [Evidence IEA]
glycine cleavage system aminomethyltransferase GcvT
COORDINATES: protein motif:HMM:NF020967.2
COORDINATES: similar to AA sequence:RefSeq:WP_012209700.1
COORDINATES: similar to AA sequence:RefSeq:WP_012209701.1
GO:0004743 - pyruvate kinase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_016099277.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0016887 - ATP hydrolysis activity [Evidence IEA]; GO:0003677 - DNA binding [Evidence IEA]
GO:0006289 - nucleotide-excision repair [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012208978.1
COORDINATES: similar to AA sequence:RefSeq:WP_012209270.1
COORDINATES: similar to AA sequence:RefSeq:WP_012209271.1
PLP-dependent aminotransferase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_014295681.1
GO:0047761 - butyrate kinase activity [Evidence IEA]
GO:0006113 - fermentation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014296864.1
GO:0016746 - acyltransferase activity [Evidence IEA]
bifunctional enoyl-CoA hydratase/phosphate acetyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_012209274.1
COORDINATES: similar to AA sequence:RefSeq:WP_012209275.1
COORDINATES: similar to AA sequence:RefSeq:WP_012209276.1
COORDINATES: similar to AA sequence:RefSeq:WP_012209277.1
3-methyl-2-oxobutanoate dehydrogenase subunit VorB
COORDINATES: similar to AA sequence:RefSeq:WP_012209278.1
GO:0003824 - catalytic activity [Evidence IEA]; GO:0030976 - thiamine pyrophosphate binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012209279.1
2-oxoacid:acceptor oxidoreductase family protein
COORDINATES: protein motif:HMM:NF013843.2
COORDINATES: protein motif:HMM:NF013579.2
GO:0006304 - DNA modification [Evidence IEA]
COORDINATES: protein motif:HMM:NF013704.2
COORDINATES: protein motif:HMM:NF012027.0
GO:0003677 - DNA binding [Evidence IEA]; GO:0016788 - hydrolase activity, acting on ester bonds [Evidence IEA]
type III restriction-modification system endonuclease
COORDINATES: similar to AA sequence:RefSeq:WP_014297428.1
COORDINATES: protein motif:HMM:NF015629.2
COORDINATES: similar to AA sequence:RefSeq:WP_014295931.1
COORDINATES: protein motif:HMM:NF024754.2
COORDINATES: similar to AA sequence:RefSeq:WP_012208248.1
GO:0008479 - queuine tRNA-ribosyltransferase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF016825.2
cyclodeaminase/cyclohydrolase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_012208411.1
GO:0004731 - purine-nucleoside phosphorylase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012208412.1
bifunctional oligoribonuclease/PAP phosphatase NrnA
COORDINATES: protein motif:HMM:NF014012.2
GO:0008324 - monoatomic cation transmembrane transporter activity [Evidence IEA]
GO:0006812 - monoatomic cation transport [Evidence IEA]
COORDINATES: protein motif:HMM:NF015993.2
COORDINATES: protein motif:HMM:NF015302.2
GO:0051139 - metal cation:proton antiporter activity [Evidence IEA]
GO:0098662 - inorganic cation transmembrane transport [Evidence IEA]; GO:1902600 - proton transmembrane transport [Evidence IEA]
monovalent cation/H(+) antiporter subunit G
COORDINATES: protein motif:HMM:NF012707.2
transporter substrate-binding domain-containing protein
COORDINATES: protein motif:HMM:NF015970.2
COORDINATES: similar to AA sequence:RefSeq:WP_012208417.1
COORDINATES: protein motif:HMM:NF012581.2
proton-conducting transporter membrane subunit
COORDINATES: similar to AA sequence:RefSeq:WP_012208791.1
GO:0015093 - ferrous iron transmembrane transporter activity [Evidence IEA]
GO:0006826 - iron ion transport [Evidence IEA]
COORDINATES: protein motif:HMM:NF015956.2
COORDINATES: protein motif:HMM:NF016800.2
COORDINATES: protein motif:HMM:TIGR00762.1
COORDINATES: protein motif:HMM:NF008168.0
GO:0005524 - ATP binding [Evidence IEA]; GO:0003678 - DNA helicase activity [Evidence IEA]; GO:0003676 - nucleic acid binding [Evidence IEA]
GO:0006310 - DNA recombination [Evidence IEA]; GO:0006281 - DNA repair [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00095.1
GO:0052913 - 16S rRNA (guanine(966)-N(2))-methyltransferase activity [Evidence IEA]
GO:0031167 - rRNA methylation [Evidence IEA]
16S rRNA (guanine(966)-N(2))-methyltransferase RsmD
COORDINATES: protein motif:HMM:NF022179.2
late competence development ComFB family protein
COORDINATES: protein motif:HMM:NF013871.2
COORDINATES: similar to AA sequence:RefSeq:WP_012208385.1
COORDINATES: similar to AA sequence:RefSeq:WP_012209104.1
GO:0008761 - UDP-N-acetylglucosamine 2-epimerase activity [Evidence IEA]
GO:0009103 - lipopolysaccharide biosynthetic process [Evidence IEA]
UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing)
COORDINATES: similar to AA sequence:RefSeq:WP_012209281.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0016887 - ATP hydrolysis activity [Evidence IEA]; GO:0046983 - protein dimerization activity [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA]
ATP-dependent Clp protease ATP-binding subunit ClpX
COORDINATES: similar to AA sequence:RefSeq:WP_012209280.1
tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD
COORDINATES: similar to AA sequence:RefSeq:WP_012209327.1
tRNA-dihydrouridine synthase family protein
COORDINATES: protein motif:HMM:NF012301.2
COORDINATES: protein motif:HMM:NF012869.2
COORDINATES: similar to AA sequence:RefSeq:WP_014296392.1
GO:0004803 - transposase activity [Evidence IEA]
frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
radical SAM/SPASM domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_014296973.1
COORDINATES: similar to AA sequence:RefSeq:WP_014297075.1
COORDINATES: protein motif:HMM:NF013776.2
COORDINATES: protein motif:HMM:NF020296.2
COORDINATES: similar to AA sequence:RefSeq:WP_012209148.1
COORDINATES: protein motif:HMM:NF039975.1
COORDINATES: protein motif:HMM:NF021498.2
GO:0000160 - phosphorelay signal transduction system [Evidence IEA]
COORDINATES: protein motif:HMM:NF014567.2
COORDINATES: protein motif:HMM:NF020903.2
COORDINATES: protein motif:HMM:NF038262.1
COORDINATES: protein motif:HMM:TIGR00254.1
COORDINATES: protein motif:HMM:NF014763.2
COORDINATES: protein motif:HMM:NF013088.2
COORDINATES: protein motif:HMM:NF015284.2
L-serine ammonia-lyase, iron-sulfur-dependent, subunit alpha
COORDINATES: similar to AA sequence:RefSeq:WP_012208821.1
GO:0003911 - DNA ligase (NAD+) activity [Evidence IEA]
GO:0006310 - DNA recombination [Evidence IEA]; GO:0006281 - DNA repair [Evidence IEA]; GO:0006260 - DNA replication [Evidence IEA]
COORDINATES: protein motif:HMM:NF014373.2
COORDINATES: similar to AA sequence:RefSeq:WP_012208822.1
GO:0008897 - holo-[acyl-carrier-protein] synthase activity [Evidence IEA]
GO:0008610 - lipid biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF025806.2
cell division FtsA domain-containing protein
COORDINATES: protein motif:HMM:TIGR01069.1
GO:0030983 - mismatched DNA binding [Evidence IEA]
GO:0006259 - DNA metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012208826.1
GO:0008661 - 1-deoxy-D-xylulose-5-phosphate synthase activity [Evidence IEA]
GO:0009240 - isopentenyl diphosphate biosynthetic process [Evidence IEA]; GO:0008615 - pyridoxine biosynthetic process [Evidence IEA]; GO:0009228 - thiamine biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR01951.1
GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
transcription antitermination factor NusB
COORDINATES: protein motif:HMM:NF015721.2
Asp23/Gls24 family envelope stress response protein
COORDINATES: similar to AA sequence:RefSeq:WP_012207867.1
GO:0003746 - translation elongation factor activity [Evidence IEA]
GO:0006414 - translational elongation [Evidence IEA]
COORDINATES: protein motif:HMM:NF012766.2
COORDINATES: similar to AA sequence:RefSeq:WP_012208829.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0030983 - mismatched DNA binding [Evidence IEA]
GO:0006298 - mismatch repair [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012208830.1
GO:0009368 - endopeptidase Clp complex [Evidence IEA]
GO:0004176 - ATP-dependent peptidase activity [Evidence IEA]; GO:0004252 - serine-type endopeptidase activity [Evidence IEA]
ATP-dependent Clp endopeptidase proteolytic subunit ClpP
COORDINATES: protein motif:HMM:NF015958.2
COORDINATES: similar to AA sequence:RefSeq:WP_012208851.1
GO:0003924 - GTPase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012208852.1
GO:0000309 - nicotinamide-nucleotide adenylyltransferase activity [Evidence IEA]; GO:0004515 - nicotinate-nucleotide adenylyltransferase activity [Evidence IEA]
GO:0009435 - NAD biosynthetic process [Evidence IEA]
nicotinate (nicotinamide) nucleotide adenylyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_012209018.1
COORDINATES: protein motif:HMM:NF022137.2
class I SAM-dependent rRNA methyltransferase
COORDINATES: protein motif:HMM:NF011443.0
GO:0016462 - pyrophosphatase activity [Evidence IEA]
putative manganese-dependent inorganic diphosphatase
COORDINATES: protein motif:HMM:NF015871.2
COORDINATES: similar to AA sequence:RefSeq:WP_012208432.1
GO:0043190 - ATP-binding cassette (ABC) transporter complex [Evidence IEA]; GO:0009898 - cytoplasmic side of plasma membrane [Evidence IEA]
GO:0042626 - ATPase-coupled transmembrane transporter activity [Evidence IEA]; GO:0015221 - lipopolysaccharide transmembrane transporter activity [Evidence IEA]
GO:0015920 - lipopolysaccharide transport [Evidence IEA]
LPS export ABC transporter ATP-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_012208431.1
COORDINATES: similar to AA sequence:RefSeq:WP_012208430.1
GO:0009332 - glutamate-tRNA ligase complex [Evidence IEA]
GO:0004818 - glutamate-tRNA ligase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012208429.1
GO:0004632 - phosphopantothenate--cysteine ligase activity [Evidence IEA]; GO:0004633 - phosphopantothenoylcysteine decarboxylase activity [Evidence IEA]
GO:0015937 - coenzyme A biosynthetic process [Evidence IEA]; GO:0015939 - pantothenate metabolic process [Evidence IEA]
bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase CoaBC
COORDINATES: protein motif:HMM:NF015679.2
GO:0016740 - transferase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF015509.2
COORDINATES: similar to AA sequence:RefSeq:WP_012208485.1
COORDINATES: protein motif:HMM:TIGR01695.1
GO:0034204 - lipid translocation [Evidence IEA]; GO:0009252 - peptidoglycan biosynthetic process [Evidence IEA]
murein biosynthesis integral membrane protein MurJ
COORDINATES: similar to AA sequence:RefSeq:WP_012208036.1
1-phosphofructokinase family hexose kinase
COORDINATES: similar to AA sequence:RefSeq:WP_012208035.1
COORDINATES: protein motif:HMM:TIGR00089.1
tRNA (N(6)-L-threonylcarbamoyladenosine(37)-C(2))- methylthiotransferase MtaB
COORDINATES: similar to AA sequence:RefSeq:WP_012208033.1
COORDINATES: protein motif:HMM:NF017103.2
COORDINATES: similar to AA sequence:RefSeq:WP_016293117.1
COORDINATES: similar to AA sequence:RefSeq:WP_012208028.1
COORDINATES: protein motif:HMM:NF012652.2
COORDINATES: protein motif:HMM:TIGR01877.1
GO:0004521 - endoribonuclease activity [Evidence IEA]
GO:0043571 - maintenance of CRISPR repeat elements [Evidence IEA]
COORDINATES: protein motif:HMM:NF021241.2
Cas8a1 family CRISPR/Cas system-associated protein
COORDINATES: protein motif:HMM:TIGR02585.1
GO:0003674 - molecular_function [Evidence IEA]
type I-B CRISPR-associated protein Cas7/Cst2/DevR
COORDINATES: protein motif:HMM:TIGR01895.1
type I-B CRISPR-associated protein Cas5b
COORDINATES: protein motif:HMM:TIGR01587.1
CRISPR-associated helicase/endonuclease Cas3
COORDINATES: protein motif:HMM:TIGR00372.1
GO:0004518 - nuclease activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012209661.1
GO:0004520 - endodeoxyribonuclease activity [Evidence IEA]
type I-B CRISPR-associated endonuclease Cas1b
COORDINATES: similar to AA sequence:RefSeq:WP_012209660.1
COORDINATES: similar to AA sequence:RefSeq:WP_076611172.1
programmed frameshift; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_016290719.1
COORDINATES: protein motif:HMM:NF009057.0
GO:0030170 - pyridoxal phosphate binding [Evidence IEA]; GO:0004834 - tryptophan synthase activity [Evidence IEA]
GO:0000162 - tryptophan biosynthetic process [Evidence IEA]; GO:0006568 - tryptophan metabolic process [Evidence IEA]
TrpB-like pyridoxal phosphate-dependent enzyme
COORDINATES: protein motif:HMM:NF012464.2
GO:0003677 - DNA binding [Evidence IEA]; GO:0000150 - DNA strand exchange activity [Evidence IEA]
GO:0006310 - DNA recombination [Evidence IEA]
COORDINATES: protein motif:HMM:NF025574.2
COORDINATES: protein motif:HMM:NF013868.2
COORDINATES: protein motif:HMM:NF022019.2
GO:0003677 - DNA binding [Evidence IEA]; GO:0008170 - N-methyltransferase activity [Evidence IEA]
GO:0006306 - DNA methylation [Evidence IEA]
COORDINATES: protein motif:HMM:NF024835.2
helix-turn-helix transcriptional regulator
COORDINATES: protein motif:HMM:NF015776.2
COORDINATES: protein motif:HMM:NF024118.2
COORDINATES: protein motif:HMM:TIGR02220.1
conserved phage C-terminal domain-containing protein
COORDINATES: protein motif:HMM:NF015736.2
COORDINATES: protein motif:HMM:TIGR00621.2
COORDINATES: protein motif:HMM:TIGR00576.1
GO:0004170 - dUTP diphosphatase activity [Evidence IEA]; GO:0000287 - magnesium ion binding [Evidence IEA]
GO:0006226 - dUMP biosynthetic process [Evidence IEA]; GO:0046081 - dUTP catabolic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF017663.2
GO:0000287 - magnesium ion binding [Evidence IEA]
RusA family crossover junction endodeoxyribonuclease
sigma-70 family RNA polymerase sigma factor
type II toxin-antitoxin system MqsR family toxin
COORDINATES: similar to AA sequence:RefSeq:WP_012209031.1
COORDINATES: protein motif:HMM:NF024422.2
phBC6A51 family helix-turn-helix protein
COORDINATES: protein motif:HMM:TIGR01547.1
PBSX family phage terminase large subunit
COORDINATES: protein motif:HMM:NF014921.2
COORDINATES: protein motif:HMM:NF015802.2
COORDINATES: protein motif:HMM:NF039819.1
COORDINATES: protein motif:HMM:TIGR01760.1
GO:0005198 - structural molecule activity [Evidence IEA]
GO:0016032 - viral process [Evidence IEA]
COORDINATES: protein motif:HMM:NF012376.2
COORDINATES: protein motif:HMM:NF021218.2
COORDINATES: protein motif:HMM:NF014453.2
COORDINATES: protein motif:HMM:NF014516.2
COORDINATES: similar to AA sequence:RefSeq:WP_012209651.1
COORDINATES: similar to AA sequence:RefSeq:WP_012208799.1
GO:0071949 - FAD binding [Evidence IEA]; GO:0008762 - UDP-N-acetylmuramate dehydrogenase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF014724.2
COORDINATES: similar to AA sequence:RefSeq:WP_012208668.1
GO:0005525 - GTP binding [Evidence IEA]; GO:0003924 - GTPase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012208669.1
COORDINATES: protein motif:HMM:NF024880.2
COORDINATES: similar to AA sequence:RefSeq:WP_012208195.1
GO:0003677 - DNA binding [Evidence IEA]; GO:0003700 - DNA-binding transcription factor activity [Evidence IEA]; GO:0016987 - sigma factor activity [Evidence IEA]
GO:0006352 - DNA-templated transcription initiation [Evidence IEA]; GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_019235960.1
GO:0004823 - leucine-tRNA ligase activity [Evidence IEA]
GO:0006429 - leucyl-tRNA aminoacylation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012208192.1
redox-sensing transcriptional repressor Rex
COORDINATES: similar to AA sequence:RefSeq:WP_012208834.1
GO:0008649 - rRNA methyltransferase activity [Evidence IEA]; GO:0008757 - S-adenosylmethionine-dependent methyltransferase activity [Evidence IEA]
GO:0000451 - rRNA 2'-O-methylation [Evidence IEA]
16S rRNA (cytidine(1402)-2'-O)-methyltransferase
COORDINATES: protein motif:HMM:TIGR00237.1
GO:0009318 - exodeoxyribonuclease VII complex [Evidence IEA]
GO:0008855 - exodeoxyribonuclease VII activity [Evidence IEA]
GO:0006308 - DNA catabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012208832.1
COORDINATES: protein motif:HMM:NF025025.2
COORDINATES: similar to AA sequence:RefSeq:WP_012209575.1
COORDINATES: similar to AA sequence:RefSeq:WP_012209574.1
COORDINATES: similar to AA sequence:RefSeq:WP_012207888.1
GO:0004588 - orotate phosphoribosyltransferase activity [Evidence IEA]
GO:0009220 - pyrimidine ribonucleotide biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR02127.1
GO:0004590 - orotidine-5'-phosphate decarboxylase activity [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR01037.1
GO:0004152 - dihydroorotate dehydrogenase activity [Evidence IEA]
GO:0006221 - pyrimidine nucleotide biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF013161.2
COORDINATES: protein motif:HMM:TIGR00857.1
COORDINATES: similar to AA sequence:RefSeq:WP_012208802.1
bifunctional aspartate carbamoyltransferase catalytic subunit/aspartate carbamoyltransferase regulatory subunit
COORDINATES: nucleotide motif:Rfam:14.4:RF00167
purine riboswitch; Derived by automated computational analysis using gene prediction method: cmsearch.
COORDINATES: similar to AA sequence:RefSeq:WP_012209738.1
5-(carboxyamino)imidazole ribonucleotide mutase
COORDINATES: similar to AA sequence:RefSeq:WP_012209739.1
GO:0004639 - phosphoribosylaminoimidazolesuccinocarboxamide synthase activity [Evidence IEA]
GO:0006164 - purine nucleotide biosynthetic process [Evidence IEA]
phosphoribosylaminoimidazolesuccinocarboxamide synthase
COORDINATES: protein motif:HMM:TIGR00302.1
GO:0004642 - phosphoribosylformylglycinamidine synthase activity [Evidence IEA]
GO:0009152 - purine ribonucleotide biosynthetic process [Evidence IEA]
phosphoribosylformylglycinamidine synthase subunit PurS
COORDINATES: similar to AA sequence:RefSeq:WP_012209741.1
GO:0006189 - 'de novo' IMP biosynthetic process [Evidence IEA]
phosphoribosylformylglycinamidine synthase subunit PurQ
COORDINATES: protein motif:HMM:TIGR01736.1
phosphoribosylformylglycinamidine synthase subunit PurL
COORDINATES: protein motif:HMM:TIGR01134.1
GO:0004044 - amidophosphoribosyltransferase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012209566.1
GO:0004641 - phosphoribosylformylglycinamidine cyclo-ligase activity [Evidence IEA]
GO:0006189 - 'de novo' IMP biosynthetic process [Evidence IEA]; GO:0009152 - purine ribonucleotide biosynthetic process [Evidence IEA]
phosphoribosylformylglycinamidine cyclo-ligase
COORDINATES: similar to AA sequence:RefSeq:WP_012209565.1
GO:0004644 - phosphoribosylglycinamide formyltransferase activity [Evidence IEA]
phosphoribosylglycinamide formyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_012209564.1
GO:0003824 - catalytic activity [Evidence IEA]; GO:0003937 - IMP cyclohydrolase activity [Evidence IEA]; GO:0004643 - phosphoribosylaminoimidazolecarboxamide formyltransferase activity [Evidence IEA]
GO:0006189 - 'de novo' IMP biosynthetic process [Evidence IEA]; GO:0006164 - purine nucleotide biosynthetic process [Evidence IEA]
bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase
COORDINATES: similar to AA sequence:RefSeq:WP_012209562.1
GO:0004637 - phosphoribosylamine-glycine ligase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012209117.1
COORDINATES: protein motif:HMM:NF015889.2
GO:0015661 - L-lysine efflux transmembrane transporter activity [Evidence IEA]
GO:1903401 - L-lysine transmembrane transport [Evidence IEA]
COORDINATES: protein motif:HMM:NF012435.2
COORDINATES: protein motif:HMM:NF033493.0
MetS family NSS transporter small subunit
COORDINATES: protein motif:HMM:NF015557.2
GO:0055085 - transmembrane transport [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012209710.1
COORDINATES: similar to AA sequence:RefSeq:WP_012209711.1
COORDINATES: similar to AA sequence:RefSeq:WP_012209712.1
GO:0003700 - DNA-binding transcription factor activity [Evidence IEA]
GO:0051049 - regulation of transport [Evidence IEA]
phosphate signaling complex protein PhoU
COORDINATES: similar to AA sequence:RefSeq:WP_004810563.1
GO:0055052 - ATP-binding cassette (ABC) transporter complex, substrate-binding subunit-containing [Evidence IEA]; GO:0009898 - cytoplasmic side of plasma membrane [Evidence IEA]
GO:0005524 - ATP binding [Evidence IEA]; GO:0015415 - ATPase-coupled phosphate ion transmembrane transporter activity [Evidence IEA]
phosphate ABC transporter ATP-binding protein PstB
COORDINATES: similar to AA sequence:RefSeq:WP_012209714.1
GO:0055052 - ATP-binding cassette (ABC) transporter complex, substrate-binding subunit-containing [Evidence IEA]; GO:0005886 - plasma membrane [Evidence IEA]
GO:0015415 - ATPase-coupled phosphate ion transmembrane transporter activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012209715.1
COORDINATES: similar to AA sequence:RefSeq:WP_012209716.1
GO:0042301 - phosphate ion binding [Evidence IEA]
phosphate ABC transporter substrate-binding protein PstS family protein
COORDINATES: similar to AA sequence:RefSeq:WP_012208856.1
COORDINATES: protein motif:HMM:NF022883.2
COORDINATES: protein motif:HMM:NF040561.1
CRISPR-associated primase-polymerase type A1
COORDINATES: protein motif:HMM:TIGR00287.1
GO:0004520 - endodeoxyribonuclease activity [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR01573.1
COORDINATES: protein motif:HMM:NF021006.2
COORDINATES: protein motif:HMM:NF021189.2
COORDINATES: protein motif:HMM:NF015728.2
type III-B CRISPR module RAMP protein Cmr6
COORDINATES: protein motif:HMM:TIGR01881.1
type III-B CRISPR module-associated protein Cmr5
COORDINATES: protein motif:HMM:TIGR02580.1
type III-B CRISPR module RAMP protein Cmr4
COORDINATES: protein motif:HMM:TIGR01888.1
GO:0005575 - cellular_component [Evidence IEA]
type III-B CRISPR module-associated protein Cmr3
COORDINATES: protein motif:HMM:TIGR02577.1
type III-B CRISPR-associated protein Cas10/Cmr2
type III-B CRISPR module RAMP protein Cmr1
COORDINATES: similar to AA sequence:RefSeq:WP_014295696.1
COORDINATES: protein motif:HMM:NF025380.2
COORDINATES: protein motif:HMM:NF012318.2
trypsin-like peptidase domain-containing protein
COORDINATES: protein motif:HMM:NF018508.2
COORDINATES: protein motif:HMM:NF021349.2
COORDINATES: protein motif:HMM:NF012257.2
Crp/Fnr family transcriptional regulator
COORDINATES: protein motif:HMM:NF012742.2
LacI family DNA-binding transcriptional regulator
COORDINATES: similar to AA sequence:RefSeq:WP_012207863.1
COORDINATES: similar to AA sequence:RefSeq:WP_012208663.1
GO:0003747 - translation release factor activity [Evidence IEA]
GO:0006415 - translational termination [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00004.1
GO:0019239 - deaminase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012208662.1
GO:0004829 - threonine-tRNA ligase activity [Evidence IEA]
GO:0006435 - threonyl-tRNA aminoacylation [Evidence IEA]
cyclic nucleotide-binding domain-containing protein
COORDINATES: protein motif:HMM:NF012744.2
COORDINATES: protein motif:HMM:NF015651.2
lysylphosphatidylglycerol synthase transmembrane domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_012208436.1
COORDINATES: similar to AA sequence:RefSeq:WP_014296606.1
COORDINATES: similar to AA sequence:RefSeq:WP_012208402.1
COORDINATES: protein motif:HMM:NF014062.2
COORDINATES: similar to AA sequence:RefSeq:WP_012208400.1
COORDINATES: similar to AA sequence:RefSeq:WP_012208399.1
GO:0022625 - cytosolic large ribosomal subunit [Evidence IEA]; GO:0000311 - plastid large ribosomal subunit [Evidence IEA]
GO:0003735 - structural constituent of ribosome [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012096455.1
GO:0022627 - cytosolic small ribosomal subunit [Evidence IEA]; GO:0000314 - organellar small ribosomal subunit [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012208396.1
COORDINATES: similar to AA sequence:RefSeq:WP_012208003.1
COORDINATES: similar to AA sequence:RefSeq:WP_012208002.1
COORDINATES: similar to AA sequence:RefSeq:WP_012208001.1
COORDINATES: similar to AA sequence:RefSeq:WP_012208000.1
GO:0008962 - phosphatidylglycerophosphatase activity [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00149.1
secondary thiamine-phosphate synthase enzyme YjbQ
COORDINATES: protein motif:HMM:NF012457.2
GO:0004553 - hydrolase activity, hydrolyzing O-glycosyl compounds [Evidence IEA]
GO:0005975 - carbohydrate metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014296123.1
COORDINATES: similar to AA sequence:RefSeq:WP_012208420.1
COORDINATES: protein motif:HMM:NF019884.2
COORDINATES: protein motif:HMM:NF013614.2
GO:0016226 - iron-sulfur cluster assembly [Evidence IEA]
SufD family Fe-S cluster assembly protein
ATP-binding cassette domain-containing protein
COORDINATES: protein motif:HMM:NF013980.2
SprT family zinc-dependent metalloprotease
COORDINATES: protein motif:HMM:NF019585.2
COORDINATES: similar to AA sequence:RefSeq:WP_012209440.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0016887 - ATP hydrolysis activity [Evidence IEA]
GO:0006457 - protein folding [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00456.1
GO:0004814 - arginine-tRNA ligase activity [Evidence IEA]
GO:0006420 - arginyl-tRNA aminoacylation [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR04013.1
GO:0051539 - 4 iron, 4 sulfur cluster binding [Evidence IEA]; GO:0003824 - catalytic activity [Evidence IEA]
GO:0046500 - S-adenosylmethionine metabolic process [Evidence IEA]
TIGR04013 family B12-binding domain/radical SAM domain-containing protein
COORDINATES: protein motif:HMM:NF012678.2
COORDINATES: similar to AA sequence:RefSeq:WP_016110865.1
incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: protein motif:HMM:TIGR00633.1
COORDINATES: similar to AA sequence:RefSeq:WP_012209325.1
GO:0016853 - isomerase activity [Evidence IEA]; GO:0016740 - transferase activity [Evidence IEA]
tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA
COORDINATES: similar to AA sequence:RefSeq:WP_012208883.1
COORDINATES: protein motif:HMM:TIGR00150.1
GO:0016887 - ATP hydrolysis activity [Evidence IEA]
tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE
COORDINATES: protein motif:HMM:NF000756.0
COORDINATES: similar to AA sequence:RefSeq:WP_012208895.1
GO:0008410 - CoA-transferase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012208896.1
COORDINATES: similar to AA sequence:RefSeq:WP_012208897.1
COORDINATES: similar to AA sequence:RefSeq:WP_012208898.1
3-keto-5-aminohexanoate cleavage protein
COORDINATES: similar to AA sequence:RefSeq:WP_012208899.1
COORDINATES: similar to AA sequence:RefSeq:WP_012208900.1
GO:0051539 - 4 iron, 4 sulfur cluster binding [Evidence IEA]; GO:0050066 - lysine 2,3-aminomutase activity [Evidence IEA]; GO:1904047 - S-adenosyl-L-methionine binding [Evidence IEA]
GO:0046440 - L-lysine metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012208901.1
COORDINATES: similar to AA sequence:RefSeq:WP_012208902.1
COORDINATES: similar to AA sequence:RefSeq:WP_012208903.1
COORDINATES: similar to AA sequence:RefSeq:WP_012208904.1
COORDINATES: similar to AA sequence:RefSeq:WP_012208905.1
GO:0046983 - protein dimerization activity [Evidence IEA]
Presence of a B(12) (cobalamin)-binding domain implies dependence on cobalamin itself, in one of its several forms, or in some unusual lineages, dependence on a cobalamin-like analog; Derived by automated computational analysis using gene prediction method: Protein Homology.
OAM dimerization domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_014295619.1
COORDINATES: similar to AA sequence:RefSeq:WP_012208353.1
COORDINATES: similar to AA sequence:RefSeq:WP_012208127.1
COORDINATES: protein motif:HMM:NF015531.2
GO:0008236 - serine-type peptidase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF015957.2
COORDINATES: similar to AA sequence:RefSeq:WP_012208047.1
GO:0098662 - inorganic cation transmembrane transport [Evidence IEA]
COORDINATES: protein motif:HMM:NF001911.0
COORDINATES: protein motif:HMM:NF025946.2
COORDINATES: similar to AA sequence:RefSeq:WP_012208706.1
GO:0008817 - corrinoid adenosyltransferase activity [Evidence IEA]
GO:0009236 - cobalamin biosynthetic process [Evidence IEA]
cob(I)yrinic acid a,c-diamide adenosyltransferase
COORDINATES: protein motif:HMM:NF016351.2
COORDINATES: protein motif:HMM:TIGR00488.1
bis(5'-nucleosyl)-tetraphosphatase (symmetrical) YqeK
COORDINATES: protein motif:HMM:TIGR00350.1
COORDINATES: protein motif:HMM:NF014717.2
COORDINATES: similar to AA sequence:RefSeq:WP_012208733.1
GO:0004550 - nucleoside diphosphate kinase activity [Evidence IEA]
GO:0006165 - nucleoside diphosphate phosphorylation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012208734.1
GO:0008878 - glucose-1-phosphate adenylyltransferase activity [Evidence IEA]
GO:0005978 - glycogen biosynthetic process [Evidence IEA]
glucose-1-phosphate adenylyltransferase subunit GlgD
COORDINATES: similar to AA sequence:RefSeq:WP_016292847.1
COORDINATES: protein motif:HMM:NF027565.2
COORDINATES: similar to AA sequence:RefSeq:WP_012208738.1
GO:0003824 - catalytic activity [Evidence IEA]; GO:0051536 - iron-sulfur cluster binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012208448.1
GO:0051539 - 4 iron, 4 sulfur cluster binding [Evidence IEA]; GO:0009055 - electron transfer activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012208449.1
RnfABCDGE type electron transport complex subunit D
COORDINATES: similar to AA sequence:RefSeq:WP_012208450.1
GO:0005886 - plasma membrane [Evidence IEA]
GO:0009055 - electron transfer activity [Evidence IEA]; GO:0010181 - FMN binding [Evidence IEA]
GO:0022900 - electron transport chain [Evidence IEA]
RnfABCDGE type electron transport complex subunit G
COORDINATES: similar to AA sequence:RefSeq:WP_012208451.1
COORDINATES: similar to AA sequence:RefSeq:WP_012208452.1
COORDINATES: similar to AA sequence:RefSeq:WP_012208794.1
GO:0051536 - iron-sulfur cluster binding [Evidence IEA]
COORDINATES: protein motif:HMM:NF015155.2
COORDINATES: similar to AA sequence:RefSeq:WP_012208647.1
COORDINATES: similar to AA sequence:RefSeq:WP_012209237.1
COORDINATES: protein motif:HMM:NF015431.2
COORDINATES: protein motif:HMM:NF006143.0
GO:0016616 - oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor [Evidence IEA]
GO:0006631 - fatty acid metabolic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF024808.2
COORDINATES: protein motif:HMM:NF012738.2
COORDINATES: similar to AA sequence:RefSeq:WP_014296045.1
COORDINATES: similar to AA sequence:RefSeq:WP_014296042.1
COORDINATES: protein motif:HMM:TIGR00478.1
COORDINATES: similar to AA sequence:RefSeq:WP_012207902.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0003922 - GMP synthase (glutamine-hydrolyzing) activity [Evidence IEA]; GO:0016462 - pyrophosphatase activity [Evidence IEA]
GO:0006177 - GMP biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_016291787.1
GO:0003938 - IMP dehydrogenase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF019310.2
GO:0022857 - transmembrane transporter activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012209484.1
COORDINATES: protein motif:HMM:TIGR03651.1
uberolysin/carnocyclin family circular bacteriocin
COORDINATES: protein motif:HMM:NF006969.0
COORDINATES: protein motif:HMM:NF013592.2
GO:0008237 - metallopeptidase activity [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA]
COORDINATES: protein motif:HMM:NF024743.2
DUF4097 family beta strand repeat-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_012209502.1
COORDINATES: similar to AA sequence:RefSeq:WP_012209339.1
COORDINATES: similar to AA sequence:RefSeq:WP_012208108.1
alanine--glyoxylate aminotransferase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_012208109.1
COORDINATES: similar to AA sequence:RefSeq:WP_012208110.1
COORDINATES: similar to AA sequence:RefSeq:WP_012208111.1
GO:0000918 - division septum site selection [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012208113.1
COORDINATES: similar to AA sequence:RefSeq:WP_014297376.1
GO:0009975 - cyclase activity [Evidence IEA]
GO:0009966 - regulation of signal transduction [Evidence IEA]
COORDINATES: protein motif:HMM:NF024850.2
COORDINATES: protein motif:HMM:NF024491.2
phospholipase D-like domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_012208997.1
COORDINATES: similar to AA sequence:RefSeq:WP_016290849.1
GO:0008929 - methylglyoxal synthase activity [Evidence IEA]
GO:0019242 - methylglyoxal biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00309.1
COORDINATES: similar to AA sequence:RefSeq:WP_010744508.1
COORDINATES: protein motif:HMM:NF003220.0
COORDINATES: protein motif:HMM:NF014092.2
COORDINATES: protein motif:HMM:NF012365.2
COORDINATES: protein motif:HMM:NF013647.2
GO:0033179 - proton-transporting V-type ATPase, V0 domain [Evidence IEA]
GO:0015078 - proton transmembrane transporter activity [Evidence IEA]
GO:1902600 - proton transmembrane transport [Evidence IEA]
V-type ATPase 116kDa subunit family protein
COORDINATES: protein motif:HMM:NF014094.2
GO:0016788 - hydrolase activity, acting on ester bonds [Evidence IEA]
COORDINATES: protein motif:HMM:NF019581.2
COORDINATES: protein motif:HMM:TIGR01512.1
COORDINATES: similar to AA sequence:RefSeq:WP_003145044.1
COORDINATES: protein motif:HMM:NF017957.2
COORDINATES: similar to AA sequence:RefSeq:WP_012209548.1
COORDINATES: similar to AA sequence:RefSeq:WP_012209035.1
GO:0004180 - carboxypeptidase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012209036.1
GO:0030170 - pyridoxal phosphate binding [Evidence IEA]; GO:0008483 - transaminase activity [Evidence IEA]
aminotransferase class III-fold pyridoxal phosphate-dependent enzyme
COORDINATES: similar to AA sequence:RefSeq:WP_012209037.1
GO:0004072 - aspartate kinase activity [Evidence IEA]
GO:0009089 - lysine biosynthetic process via diaminopimelate [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012209038.1
GO:0047200 - tetrahydrodipicolinate N-acetyltransferase activity [Evidence IEA]
2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_012209039.1
GO:0008839 - 4-hydroxy-tetrahydrodipicolinate reductase [Evidence IEA]
dihydrodipicolinate reductase C-terminal domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_012209040.1
GO:0008840 - 4-hydroxy-tetrahydrodipicolinate synthase activity [Evidence IEA]
4-hydroxy-tetrahydrodipicolinate synthase
COORDINATES: protein motif:HMM:NF012500.2
COORDINATES: similar to AA sequence:RefSeq:WP_012209042.1
GO:0004073 - aspartate-semialdehyde dehydrogenase activity [Evidence IEA]; GO:0051287 - NAD binding [Evidence IEA]; GO:0016620 - oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor [Evidence IEA]
GO:0008652 - amino acid biosynthetic process [Evidence IEA]
COORDINATES: nucleotide motif:Rfam:14.4:RF00168
Lysine riboswitch is most abundant in Firmicutes and Gammaproteobacteria where they are found upstream of a number of genes involved in lysine biosynthesis, transport and catabolism; Derived by automated computational analysis using gene prediction method: cmsearch.
COORDINATES: similar to AA sequence:RefSeq:WP_016293058.1
COORDINATES: protein motif:HMM:NF012515.2
COORDINATES: protein motif:HMM:NF017946.2
COORDINATES: protein motif:HMM:TIGR02254.1
GO:0008253 - 5'-nucleotidase activity [Evidence IEA]
YjjG family noncanonical pyrimidine nucleotidase
COORDINATES: protein motif:HMM:NF013382.2
COORDINATES: similar to AA sequence:RefSeq:WP_012209723.1
GO:0030604 - 1-deoxy-D-xylulose-5-phosphate reductoisomerase activity [Evidence IEA]
1-deoxy-D-xylulose-5-phosphate reductoisomerase
COORDINATES: protein motif:HMM:NF024457.2
HAMP domain-containing sensor histidine kinase
COORDINATES: similar to AA sequence:RefSeq:WP_012208698.1
GO:0016879 - ligase activity, forming carbon-nitrogen bonds [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012208699.1
GO:0016887 - ATP hydrolysis activity [Evidence IEA]; GO:0004222 - metalloendopeptidase activity [Evidence IEA]
GO:0051301 - cell division [Evidence IEA]; GO:0006508 - proteolysis [Evidence IEA]
COORDINATES: protein motif:HMM:NF015048.2
COORDINATES: similar to AA sequence:RefSeq:WP_012208701.1
COORDINATES: similar to AA sequence:RefSeq:WP_012208703.1
GO:0016154 - pyrimidine-nucleoside phosphorylase activity [Evidence IEA]
GO:0006213 - pyrimidine nucleoside metabolic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF021507.2
phosphodiester glycosidase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_012208705.1
COORDINATES: similar to AA sequence:RefSeq:WP_014295967.1
COORDINATES: similar to AA sequence:RefSeq:WP_012208723.1
COORDINATES: similar to AA sequence:RefSeq:WP_012208721.1
COORDINATES: similar to AA sequence:RefSeq:WP_012208720.1
COORDINATES: similar to AA sequence:RefSeq:WP_012208719.1
COORDINATES: similar to AA sequence:RefSeq:WP_012208718.1
COORDINATES: similar to AA sequence:RefSeq:WP_012208716.1
COORDINATES: similar to AA sequence:RefSeq:WP_012208715.1
COORDINATES: similar to AA sequence:RefSeq:WP_012208714.1
COORDINATES: similar to AA sequence:RefSeq:WP_012208713.1
GO:0008137 - NADH dehydrogenase (ubiquinone) activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012208712.1
GO:0051287 - NAD binding [Evidence IEA]; GO:0016651 - oxidoreductase activity, acting on NAD(P)H [Evidence IEA]; GO:0048038 - quinone binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012208711.1
GO:0016491 - oxidoreductase activity [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00196.1
bifunctional ADP-dependent NAD(P)H-hydrate dehydratase/NAD(P)H-hydrate epimerase
COORDINATES: protein motif:HMM:NF016439.2
DNA-directed RNA polymerase subunit sigma-24
COORDINATES: protein motif:HMM:TIGR01378.1
GO:0004788 - thiamine diphosphokinase activity [Evidence IEA]
GO:0006772 - thiamine metabolic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF024988.2
COORDINATES: protein motif:HMM:NF027681.2
NAD-dependent epimerase/dehydratase family protein
COORDINATES: protein motif:HMM:NF012245.2
GO:0007165 - signal transduction [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012208528.1
COORDINATES: protein motif:HMM:NF019912.2
COORDINATES: protein motif:HMM:NF014471.2
GO:0015109 - chromate transmembrane transporter activity [Evidence IEA]
GO:0015703 - chromate transport [Evidence IEA]
COORDINATES: protein motif:HMM:NF012911.2
COORDINATES: protein motif:HMM:NF013799.2
COORDINATES: similar to AA sequence:RefSeq:WP_012209375.1
COORDINATES: protein motif:HMM:NF016160.2
SoxR reducing system RseC family protein
COORDINATES: similar to AA sequence:RefSeq:WP_012209308.1
GO:0009380 - excinuclease repair complex [Evidence IEA]
GO:0005524 - ATP binding [Evidence IEA]; GO:0016887 - ATP hydrolysis activity [Evidence IEA]; GO:0003677 - DNA binding [Evidence IEA]; GO:0016787 - hydrolase activity [Evidence IEA]; GO:0005515 - protein binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012209554.1
COORDINATES: protein motif:HMM:NF012451.2
COORDINATES: protein motif:HMM:NF014566.2
CPBP family intramembrane metalloprotease
COORDINATES: similar to AA sequence:RefSeq:WP_012208837.1
GO:0003883 - CTP synthase activity [Evidence IEA]
GO:0006241 - CTP biosynthetic process [Evidence IEA]; GO:0006221 - pyrimidine nucleotide biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012208836.1
GO:0000036 - acyl carrier activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012209590.1
GO:0004821 - histidine-tRNA ligase activity [Evidence IEA]
GO:0006427 - histidyl-tRNA aminoacylation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012209705.1
COORDINATES: protein motif:HMM:NF014325.2
GO:0006813 - potassium ion transport [Evidence IEA]
TrkA C-terminal domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_012209703.1
COORDINATES: similar to AA sequence:RefSeq:WP_012209702.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0016887 - ATP hydrolysis activity [Evidence IEA]; GO:0008233 - peptidase activity [Evidence IEA]
ATP-dependent protease ATPase subunit HslU
COORDINATES: protein motif:HMM:NF014606.2
GO:0015159 - polysaccharide transmembrane transporter activity [Evidence IEA]
GO:0015774 - polysaccharide transport [Evidence IEA]
polysaccharide biosynthesis/export family protein
COORDINATES: protein motif:HMM:NF024299.2
COORDINATES: similar to AA sequence:RefSeq:WP_012209407.1
GO:0008374 - O-acyltransferase activity [Evidence IEA]
GO:0006654 - phosphatidic acid biosynthetic process [Evidence IEA]
glycerol-3-phosphate 1-O-acyltransferase PlsY
COORDINATES: similar to AA sequence:RefSeq:WP_012209408.1
GO:0005525 - GTP binding [Evidence IEA]; GO:0003924 - GTPase activity [Evidence IEA]; GO:0043022 - ribosome binding [Evidence IEA]
COORDINATES: protein motif:HMM:NF012784.2
GO:0003676 - nucleic acid binding [Evidence IEA]
S1 RNA-binding domain-containing protein
COORDINATES: protein motif:HMM:TIGR00216.1
GO:0051745 - 4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase activity [Evidence IEA]
GO:0009240 - isopentenyl diphosphate biosynthetic process [Evidence IEA]; GO:0046677 - response to antibiotic [Evidence IEA]; GO:0015968 - stringent response [Evidence IEA]
4-hydroxy-3-methylbut-2-enyl diphosphate reductase
COORDINATES: protein motif:HMM:NF014300.2
GO:0004127 - cytidylate kinase activity [Evidence IEA]
GO:0015949 - nucleobase-containing small molecule interconversion [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012209412.1
GO:0004812 - aminoacyl-tRNA ligase activity [Evidence IEA]; GO:0005524 - ATP binding [Evidence IEA]; GO:0016874 - ligase activity [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]
GO:0006418 - tRNA aminoacylation for protein translation [Evidence IEA]
COORDINATES: protein motif:HMM:NF012613.2
S-layer homology domain-containing protein
COORDINATES: protein motif:HMM:NF012356.2
COORDINATES: similar to AA sequence:RefSeq:WP_012208838.1
transglycosylase SLT domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_012208372.1
COORDINATES: similar to AA sequence:RefSeq:WP_012209120.1
GO:0003844 - 1,4-alpha-glucan branching enzyme activity [Evidence IEA]; GO:0043169 - cation binding [Evidence IEA]; GO:0004553 - hydrolase activity, hydrolyzing O-glycosyl compounds [Evidence IEA]
GO:0005975 - carbohydrate metabolic process [Evidence IEA]; GO:0005978 - glycogen biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR02152.1
GO:0004747 - ribokinase activity [Evidence IEA]
GO:0019303 - D-ribose catabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014296187.1
GO:0004585 - ornithine carbamoyltransferase activity [Evidence IEA]
GO:0042450 - arginine biosynthetic process via ornithine [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012207925.1
GO:0008804 - carbamate kinase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF015451.2
COORDINATES: protein motif:HMM:NF013465.2
GO:0046872 - metal ion binding [Evidence IEA]
zinc ABC transporter substrate-binding protein
COORDINATES: protein motif:HMM:NF024991.2
COORDINATES: similar to AA sequence:RefSeq:WP_012208952.1
COORDINATES: protein motif:HMM:NF026048.2
COORDINATES: protein motif:HMM:NF012955.2
COORDINATES: similar to AA sequence:RefSeq:WP_012208535.1
COORDINATES: similar to AA sequence:RefSeq:WP_012208960.1
COORDINATES: protein motif:HMM:TIGR00147.1
diacylglycerol kinase family lipid kinase
COORDINATES: protein motif:HMM:TIGR02495.1
GO:0051539 - 4 iron, 4 sulfur cluster binding [Evidence IEA]
GO:0009265 - 2'-deoxyribonucleotide biosynthetic process [Evidence IEA]; GO:0051353 - positive regulation of oxidoreductase activity [Evidence IEA]
anaerobic ribonucleoside-triphosphate reductase activating protein
COORDINATES: protein motif:HMM:NF006126.0
GO:0008998 - ribonucleoside-triphosphate reductase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012209346.1
COORDINATES: similar to AA sequence:RefSeq:WP_012209468.1
COORDINATES: similar to AA sequence:RefSeq:WP_012209469.1
COORDINATES: similar to AA sequence:RefSeq:WP_012209470.1
COORDINATES: similar to AA sequence:RefSeq:WP_012209471.1
BMP family ABC transporter substrate-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_012207904.1
GO:0008252 - nucleotidase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012207905.1
GO:0042586 - peptide deformylase activity [Evidence IEA]
GO:0036211 - protein modification process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012207906.1
GO:0004479 - methionyl-tRNA formyltransferase activity [Evidence IEA]
GO:0006431 - methionyl-tRNA aminoacylation [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00374.1
COORDINATES: protein motif:HMM:NF013434.2
COORDINATES: similar to AA sequence:RefSeq:WP_012208964.1
COORDINATES: similar to AA sequence:RefSeq:WP_012209540.1
GO:0004133 - glycogen debranching enzyme activity [Evidence IEA]
GO:0005980 - glycogen catabolic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF013183.2
GO:0016810 - hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds [Evidence IEA]
nicotinamide-nucleotide amidohydrolase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_012209193.1
COORDINATES: protein motif:HMM:NF013731.2
GO:0006935 - chemotaxis [Evidence IEA]; GO:0007165 - signal transduction [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_016290481.1
COORDINATES: similar to AA sequence:RefSeq:WP_012209197.1
GO:0001539 - cilium or flagellum-dependent cell motility [Evidence IEA]
The bacterial flagellar biogenesis protein FliP forms a type III secretion system (T3SS)-type pore required for flagellar assembly; Derived by automated computational analysis using gene prediction method: Protein Homology.
flagellar type III secretion system pore protein FliP
COORDINATES: similar to AA sequence:RefSeq:WP_012209198.1
GO:0009288 - bacterial-type flagellum [Evidence IEA]
COORDINATES: protein motif:HMM:NF013478.2
GO:0044780 - bacterial-type flagellum assembly [Evidence IEA]; GO:0006605 - protein targeting [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00328.1
COORDINATES: similar to AA sequence:RefSeq:WP_012209201.1
COORDINATES: protein motif:HMM:TIGR03499.1
GO:0044781 - bacterial-type flagellum organization [Evidence IEA]; GO:0006614 - SRP-dependent cotranslational protein targeting to membrane [Evidence IEA]
COORDINATES: protein motif:HMM:NF012369.2
COORDINATES: protein motif:HMM:NF025070.2
COORDINATES: protein motif:HMM:NF041119.1
GO:0008984 - protein-glutamate methylesterase activity [Evidence IEA]; GO:0050568 - protein-glutamine glutaminase activity [Evidence IEA]
chemoreceptor glutamine deamidase/glutamate methylesterase CheD
COORDINATES: similar to AA sequence:RefSeq:WP_012209206.1
GO:0003677 - DNA binding [Evidence IEA]; GO:0003899 - DNA-directed 5'-3' RNA polymerase activity [Evidence IEA]; GO:0016987 - sigma factor activity [Evidence IEA]
GO:0006352 - DNA-templated transcription initiation [Evidence IEA]
FliA/WhiG family RNA polymerase sigma factor
COORDINATES: similar to AA sequence:RefSeq:WP_012209210.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0016887 - ATP hydrolysis activity [Evidence IEA]; GO:0003690 - double-stranded DNA binding [Evidence IEA]; GO:0005515 - protein binding [Evidence IEA]
COORDINATES: nucleotide motif:Rfam:14.4:RF00001
COORDINATES: nucleotide motif:Rfam:14.4:RF02541
COORDINATES: nucleotide motif:Rfam:14.4:RF00177
COORDINATES: protein motif:HMM:NF012774.2
COORDINATES: similar to AA sequence:RefSeq:WP_012209615.1
COORDINATES: similar to AA sequence:RefSeq:WP_012209163.1
COORDINATES: similar to AA sequence:RefSeq:WP_002297874.1
GO:0004068 - aspartate 1-decarboxylase activity [Evidence IEA]
GO:0006523 - alanine biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012207903.1
COORDINATES: protein motif:HMM:TIGR00595.1
GO:0005658 - alpha DNA polymerase:primase complex [Evidence IEA]
GO:0003678 - DNA helicase activity [Evidence IEA]; GO:0003688 - DNA replication origin binding [Evidence IEA]; GO:0016818 - hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides [Evidence IEA]
COORDINATES: protein motif:HMM:NF012874.2
GO:0071973 - bacterial-type flagellum-dependent cell motility [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012208793.1
COORDINATES: protein motif:HMM:NF015047.2
COORDINATES: similar to AA sequence:RefSeq:WP_012209635.1
GO:0051539 - 4 iron, 4 sulfur cluster binding [Evidence IEA]; GO:1904047 - S-adenosyl-L-methionine binding [Evidence IEA]; GO:0016782 - transferase activity, transferring sulphur-containing groups [Evidence IEA]
tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB
COORDINATES: similar to AA sequence:RefSeq:WP_012208369.1
COORDINATES: protein motif:HMM:NF011494.0
GO:0008168 - methyltransferase activity [Evidence IEA]; GO:0003723 - RNA binding [Evidence IEA]
GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]; GO:0001510 - RNA methylation [Evidence IEA]
16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB
COORDINATES: protein motif:HMM:NF012913.2
COORDINATES: protein motif:HMM:NF013740.2
COORDINATES: protein motif:HMM:NF016214.2
COORDINATES: protein motif:HMM:TIGR03725.1
GO:0003725 - double-stranded RNA binding [Evidence IEA]
tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex dimerization subunit type 1 TsaB
fibronectin type III domain-containing protein
COORDINATES: protein motif:HMM:NF012340.2
GO:0008234 - cysteine-type peptidase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF016876.2
type II toxin-antitoxin system RelE/ParE family toxin
COORDINATES: protein motif:HMM:NF013561.2
COORDINATES: similar to AA sequence:RefSeq:WP_012208303.1
COORDINATES: similar to AA sequence:RefSeq:WP_012208168.1
GO:0048501 - signal recognition particle, plasma membrane targeting [Evidence IEA]
GO:0003924 - GTPase activity [Evidence IEA]; GO:0005048 - signal sequence binding [Evidence IEA]
GO:0009306 - protein secretion [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:YP_499745.1
COORDINATES: similar to AA sequence:RefSeq:WP_012208170.1
COORDINATES: protein motif:HMM:TIGR02273.1
GO:0006364 - rRNA processing [Evidence IEA]
Essential for efficient processing of 16S rRNA; Essential for efficient processing of 16S rRNA; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_012208172.1
GO:0052906 - tRNA (guanine(37)-N(1))-methyltransferase activity [Evidence IEA]
GO:0008033 - tRNA processing [Evidence IEA]
tRNA (guanosine(37)-N1)-methyltransferase TrmD
COORDINATES: similar to AA sequence:RefSeq:WP_012208173.1
COORDINATES: similar to AA sequence:RefSeq:WP_012208174.1
COORDINATES: similar to AA sequence:RefSeq:WP_012208175.1
GO:0004252 - serine-type endopeptidase activity [Evidence IEA]
GO:0009306 - protein secretion [Evidence IEA]; GO:0006465 - signal peptide processing [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00138.1
GO:0008168 - methyltransferase activity [Evidence IEA]
GO:0046118 - 7-methylguanosine biosynthetic process [Evidence IEA]; GO:0031167 - rRNA methylation [Evidence IEA]
16S rRNA (guanine(527)-N(7))-methyltransferase RsmG
COORDINATES: protein motif:HMM:NF015084.2
biotin/lipoate A/B protein ligase family protein
COORDINATES: protein motif:HMM:NF026177.2
COORDINATES: protein motif:HMM:NF014135.2
COORDINATES: similar to AA sequence:RefSeq:WP_012208313.1
sugar ABC transporter substrate-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_012208314.1
COORDINATES: similar to AA sequence:RefSeq:WP_012208315.1
COORDINATES: similar to AA sequence:RefSeq:WP_012209693.1
RdgB/HAM1 family non-canonical purine NTP pyrophosphatase
COORDINATES: similar to AA sequence:RefSeq:WP_012209692.1
GO:0004750 - D-ribulose-phosphate 3-epimerase activity [Evidence IEA]
GO:0006098 - pentose-phosphate shunt [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012209691.1
GO:0005525 - GTP binding [Evidence IEA]; GO:0043022 - ribosome binding [Evidence IEA]
ribosome small subunit-dependent GTPase A
COORDINATES: protein motif:HMM:NF015734.2
COORDINATES: similar to AA sequence:RefSeq:WP_012209689.1
GO:0016433 - rRNA (adenine) methyltransferase activity [Evidence IEA]; GO:0008757 - S-adenosylmethionine-dependent methyltransferase activity [Evidence IEA]
23S rRNA (adenine(2503)-C(2))-methyltransferase RlmN
COORDINATES: similar to AA sequence:RefSeq:WP_012209732.1
COORDINATES: similar to AA sequence:RefSeq:WP_012209731.1
GO:0004525 - ribonuclease III activity [Evidence IEA]
GO:0006396 - RNA processing [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012209730.1
COORDINATES: similar to AA sequence:RefSeq:WP_012209729.1
COORDINATES: similar to AA sequence:RefSeq:WP_012209728.1
regulatory iron-sulfur-containing complex subunit RicT
COORDINATES: protein motif:HMM:NF024575.2
COORDINATES: protein motif:HMM:NF015822.2
COORDINATES: similar to AA sequence:RefSeq:WP_012208445.1
RNA-binding cell elongation regulator Jag/EloR
COORDINATES: protein motif:HMM:TIGR03592.1
GO:0051205 - protein insertion into membrane [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_002318456.1
membrane protein insertion efficiency factor YidD
COORDINATES: protein motif:HMM:TIGR00188.1
GO:0004526 - ribonuclease P activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_008650850.1
GO:0022625 - cytosolic large ribosomal subunit [Evidence IEA]; GO:0000315 - organellar large ribosomal subunit [Evidence IEA]
COORDINATES: protein motif:HMM:NF013630.2
COORDINATES: protein motif:HMM:TIGR00486.1
GO:0051540 - metal cluster binding [Evidence IEA]
Nif3-like dinuclear metal center hexameric protein
COORDINATES: similar to AA sequence:RefSeq:WP_016292962.1
GO:0140359 - ABC-type transporter activity [Evidence IEA]; GO:0005524 - ATP binding [Evidence IEA]
sn-glycerol-3-phosphate ABC transporter ATP-binding protein UgpC
COORDINATES: protein motif:HMM:NF014643.2
type II toxin-antitoxin system Phd/YefM family antitoxin
COORDINATES: similar to AA sequence:RefSeq:WP_014296888.1
COORDINATES: similar to AA sequence:RefSeq:WP_012209161.1
GO:0004816 - asparagine-tRNA ligase activity [Evidence IEA]; GO:0005524 - ATP binding [Evidence IEA]
GO:0006421 - asparaginyl-tRNA aminoacylation [Evidence IEA]
COORDINATES: protein motif:HMM:NF015692.2
ADP-ribosylglycohydrolase family protein
HAMP domain-containing methyl-accepting chemotaxis protein
COORDINATES: similar to AA sequence:RefSeq:WP_012207930.1
COORDINATES: similar to AA sequence:RefSeq:WP_012207929.1
COORDINATES: similar to AA sequence:RefSeq:WP_012207928.1
COORDINATES: similar to AA sequence:RefSeq:WP_012207926.1
MurR/RpiR family transcriptional regulator
COORDINATES: similar to AA sequence:RefSeq:WP_014296328.1
COORDINATES: similar to AA sequence:RefSeq:WP_012207967.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0042626 - ATPase-coupled transmembrane transporter activity [Evidence IEA]
ABC transporter transmembrane domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_012208166.1
GO:0050242 - pyruvate, phosphate dikinase activity [Evidence IEA]
GO:0015976 - carbon utilization [Evidence IEA]
COORDINATES: protein motif:HMM:NF000942.0
GO:0009331 - glycerol-3-phosphate dehydrogenase complex [Evidence IEA]
GO:0047952 - glycerol-3-phosphate dehydrogenase [NAD(P)+] activity [Evidence IEA]; GO:0051287 - NAD binding [Evidence IEA]
GO:0046168 - glycerol-3-phosphate catabolic process [Evidence IEA]
NAD(P)H-dependent glycerol-3-phosphate dehydrogenase
COORDINATES: protein motif:HMM:NF015758.2
MazG nucleotide pyrophosphohydrolase domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_012208588.1
GO:0022625 - cytosolic large ribosomal subunit [Evidence IEA]; GO:0005762 - mitochondrial large ribosomal subunit [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012208589.1
GO:0003677 - DNA binding [Evidence IEA]; GO:0003899 - DNA-directed 5'-3' RNA polymerase activity [Evidence IEA]; GO:0046983 - protein dimerization activity [Evidence IEA]
GO:0006351 - DNA-templated transcription [Evidence IEA]
DNA-directed RNA polymerase subunit alpha
COORDINATES: similar to AA sequence:RefSeq:WP_004410410.1
GO:0015935 - small ribosomal subunit [Evidence IEA]
GO:0019843 - rRNA binding [Evidence IEA]; GO:0003735 - structural constituent of ribosome [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_003130556.1
COORDINATES: similar to AA sequence:RefSeq:WP_003128035.1
GO:0022627 - cytosolic small ribosomal subunit [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_020322760.1
COORDINATES: similar to AA sequence:RefSeq:WP_041534284.1
GO:0003743 - translation initiation factor activity [Evidence IEA]
GO:0006413 - translational initiation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012208595.1
COORDINATES: similar to AA sequence:RefSeq:WP_012208596.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0019205 - nucleobase-containing compound kinase activity [Evidence IEA]; GO:0016776 - phosphotransferase activity, phosphate group as acceptor [Evidence IEA]
GO:0006139 - nucleobase-containing compound metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012208597.1
GO:0015450 - protein-transporting ATPase activity [Evidence IEA]
GO:0043952 - protein transport by the Sec complex [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012208598.1
COORDINATES: similar to AA sequence:RefSeq:WP_002514851.1
COORDINATES: similar to AA sequence:RefSeq:WP_012208600.1
GO:0022627 - cytosolic small ribosomal subunit [Evidence IEA]; GO:0000312 - plastid small ribosomal subunit [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012208601.1
COORDINATES: similar to AA sequence:RefSeq:WP_012208602.1
GO:0022625 - cytosolic large ribosomal subunit [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012208603.1
COORDINATES: similar to AA sequence:RefSeq:WP_011245027.1
COORDINATES: similar to AA sequence:RefSeq:WP_012208605.1
COORDINATES: similar to AA sequence:RefSeq:WP_011921687.1
COORDINATES: similar to AA sequence:RefSeq:WP_012208607.1
COORDINATES: similar to AA sequence:RefSeq:WP_006817275.1
COORDINATES: similar to AA sequence:RefSeq:WP_012208609.1
COORDINATES: similar to AA sequence:RefSeq:WP_002288661.1
COORDINATES: similar to AA sequence:RefSeq:WP_012208611.1
COORDINATES: similar to AA sequence:RefSeq:WP_000387528.1
COORDINATES: similar to AA sequence:RefSeq:WP_009001861.1
COORDINATES: similar to AA sequence:RefSeq:WP_009770933.1
COORDINATES: similar to AA sequence:RefSeq:WP_012208615.1
COORDINATES: similar to AA sequence:RefSeq:WP_012208616.1
COORDINATES: similar to AA sequence:RefSeq:WP_000579825.1
COORDINATES: similar to AA sequence:RefSeq:WP_012084982.1
GO:0003723 - RNA binding [Evidence IEA]; GO:0003735 - structural constituent of ribosome [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012208619.1
COORDINATES: similar to AA sequence:RefSeq:WP_012208620.1
COORDINATES: similar to AA sequence:RefSeq:WP_002006497.1
COORDINATES: similar to AA sequence:RefSeq:WP_000246374.1
COORDINATES: nucleotide motif:Rfam:14.4:RF00059
TPP riboswitch; Derived by automated computational analysis using gene prediction method: cmsearch.
COORDINATES: protein motif:HMM:TIGR01683.1
GO:0009228 - thiamine biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF017501.2
COORDINATES: protein motif:HMM:TIGR02351.2
GO:0016829 - lyase activity [Evidence IEA]; GO:1904047 - S-adenosyl-L-methionine binding [Evidence IEA]
COORDINATES: protein motif:HMM:NF009895.0
COORDINATES: protein motif:HMM:NF020132.2
GO:0004789 - thiamine-phosphate diphosphorylase activity [Evidence IEA]
thiamine-phosphate synthase family protein
COORDINATES: protein motif:HMM:NF040521.1
C45 family autoproteolytic acyltransferase/hydolase
COORDINATES: similar to AA sequence:RefSeq:WP_012208356.1
COORDINATES: protein motif:HMM:NF014904.2
[Fe-Fe] hydrogenase large subunit C-terminal domain-containing protein
COORDINATES: protein motif:HMM:NF010584.0
GO:0071949 - FAD binding [Evidence IEA]; GO:0050151 - oleate hydratase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF025636.2
TetR/AcrR family transcriptional regulator C-terminal domain-containing protein
COORDINATES: protein motif:HMM:NF014691.2
COORDINATES: protein motif:HMM:NF015898.2
COORDINATES: similar to AA sequence:RefSeq:WP_013290456.1
COORDINATES: protein motif:HMM:TIGR00585.2
COORDINATES: similar to AA sequence:RefSeq:WP_012208434.1
GO:0008173 - RNA methyltransferase activity [Evidence IEA]
GO:0009451 - RNA modification [Evidence IEA]
23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB
COORDINATES: protein motif:HMM:NF012843.2
ribonuclease III domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_014296103.1
COORDINATES: similar to AA sequence:RefSeq:WP_014295738.1
COORDINATES: similar to AA sequence:RefSeq:WP_014296401.1
COORDINATES: protein motif:HMM:NF037972.1
COORDINATES: protein motif:HMM:NF024786.2
4Fe-4S cluster-binding domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_012209329.1
COORDINATES: similar to AA sequence:RefSeq:WP_014297117.1
COORDINATES: protein motif:HMM:TIGR04085.1
COORDINATES: nucleotide motif:Rfam:14.4:RF00050
FMN riboswitch; Derived by automated computational analysis using gene prediction method: cmsearch.
COORDINATES: protein motif:HMM:NF006805.0
bifunctional 3,4-dihydroxy-2-butanone-4-phosphate synthase/GTP cyclohydrolase II
COORDINATES: protein motif:HMM:NF000812.0
GO:0009349 - riboflavin synthase complex [Evidence IEA]
GO:0000906 - 6,7-dimethyl-8-ribityllumazine synthase activity [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00326.1
GO:0008703 - 5-amino-6-(5-phosphoribosylamino)uracil reductase activity [Evidence IEA]; GO:0008835 - diaminohydroxyphosphoribosylaminopyrimidine deaminase activity [Evidence IEA]
bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD
COORDINATES: protein motif:HMM:TIGR00187.1
COORDINATES: similar to AA sequence:RefSeq:WP_012209450.1
COORDINATES: protein motif:HMM:NF013998.2
COORDINATES: protein motif:HMM:NF019346.2
COORDINATES: protein motif:HMM:NF014677.2
COORDINATES: protein motif:HMM:TIGR00494.1
GO:1903425 - fluoride transmembrane transporter activity [Evidence IEA]
GO:1903424 - fluoride transmembrane transport [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_015900354.1
COORDINATES: protein motif:HMM:NF014442.2
COORDINATES: similar to AA sequence:RefSeq:WP_012209154.1
COORDINATES: protein motif:HMM:NF015684.2
COORDINATES: protein motif:HMM:NF039482.1
COORDINATES: protein motif:HMM:NF014389.2
COORDINATES: protein motif:HMM:TIGR00044.1
GO:0030170 - pyridoxal phosphate binding [Evidence IEA]
YggS family pyridoxal phosphate-dependent enzyme
COORDINATES: similar to AA sequence:RefSeq:WP_012209160.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0003677 - DNA binding [Evidence IEA]; GO:0009378 - four-way junction helicase activity [Evidence IEA]
Holliday junction branch migration DNA helicase RuvB
COORDINATES: protein motif:HMM:NF014244.2
GO:0004222 - metalloendopeptidase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF001540.0
GO:0046429 - 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase activity [Evidence IEA]
GO:0044237 - cellular metabolic process [Evidence IEA]
flavodoxin-dependent (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase
COORDINATES: similar to AA sequence:RefSeq:WP_012208923.1
COORDINATES: protein motif:HMM:TIGR01893.1
COORDINATES: protein motif:HMM:NF006055.0
COORDINATES: protein motif:HMM:NF012512.2
COORDINATES: protein motif:HMM:NF014758.2
xanthine dehydrogenase family protein molybdopterin-binding subunit
COORDINATES: protein motif:HMM:NF038032.1
COORDINATES: protein motif:HMM:NF012792.2
COORDINATES: similar to AA sequence:RefSeq:WP_012209241.1
COORDINATES: protein motif:HMM:NF015715.2
COORDINATES: protein motif:HMM:NF013629.2
COORDINATES: similar to AA sequence:RefSeq:WP_012208368.1
COORDINATES: protein motif:HMM:NF014617.2
COORDINATES: protein motif:HMM:TIGR00594.1
COORDINATES: similar to AA sequence:RefSeq:WP_014297250.1
COORDINATES: protein motif:HMM:NF017633.2
COORDINATES: protein motif:HMM:NF012927.2
COORDINATES: protein motif:HMM:NF024585.2
COORDINATES: protein motif:HMM:NF014620.2
NifB/NifX family molybdenum-iron cluster-binding protein
COORDINATES: protein motif:HMM:NF025001.2
COORDINATES: protein motif:HMM:NF013793.2
COORDINATES: protein motif:HMM:NF036294.2
COORDINATES: similar to AA sequence:RefSeq:WP_012209168.1
COORDINATES: similar to AA sequence:RefSeq:WP_012209403.1
GO:0000179 - rRNA (adenine-N6,N6-)-dimethyltransferase activity [Evidence IEA]
16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))- dimethyltransferase RsmA
COORDINATES: protein motif:HMM:NF015607.2
COORDINATES: protein motif:HMM:TIGR00644.1
GO:0008297 - single-stranded DNA exodeoxyribonuclease activity [Evidence IEA]
single-stranded-DNA-specific exonuclease RecJ
COORDINATES: similar to AA sequence:RefSeq:WP_012209420.1
COORDINATES: protein motif:HMM:TIGR03170.1
GO:0009428 - bacterial-type flagellum basal body, distal rod, P ring [Evidence IEA]
flagellar basal body P-ring formation chaperone FlgA
COORDINATES: protein motif:HMM:NF014195.2
flagellar basal body L-ring protein FlgH
COORDINATES: similar to AA sequence:RefSeq:WP_012208179.1
flagellar basal body P-ring protein FlgI
COORDINATES: protein motif:HMM:TIGR00377.1
COORDINATES: protein motif:HMM:TIGR02490.1
COORDINATES: similar to AA sequence:RefSeq:WP_012208182.1
GO:0009426 - bacterial-type flagellum basal body, distal rod [Evidence IEA]
COORDINATES: protein motif:HMM:NF013117.2
mechanosensitive ion channel family protein
COORDINATES: similar to AA sequence:RefSeq:WP_012209269.1
GO:0004013 - adenosylhomocysteinase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012208023.1
GO:0051539 - 4 iron, 4 sulfur cluster binding [Evidence IEA]; GO:0016853 - isomerase activity [Evidence IEA]; GO:1904047 - S-adenosyl-L-methionine binding [Evidence IEA]
COORDINATES: protein motif:HMM:NF013219.2
COORDINATES: similar to AA sequence:RefSeq:WP_012207894.1
COORDINATES: nucleotide motif:Rfam:14.4:RF00174
cobalamin riboswitch; Derived by automated computational analysis using gene prediction method: cmsearch.
COORDINATES: protein motif:HMM:NF014598.2
LytTR family DNA-binding domain-containing protein
COORDINATES: protein motif:HMM:NF019314.2
GO:0000155 - phosphorelay sensor kinase activity [Evidence IEA]; GO:0004673 - protein histidine kinase activity [Evidence IEA]
GO:0071555 - cell wall organization [Evidence IEA]; GO:0000160 - phosphorelay signal transduction system [Evidence IEA]
LytS/YhcK type 5TM receptor domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_012208968.1
NADH-dependent [FeFe] hydrogenase, group A6
COORDINATES: similar to AA sequence:RefSeq:WP_012208969.1
NADH-ubiquinone oxidoreductase-F iron-sulfur binding region domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_012208970.1
NADH-quinone oxidoreductase subunit NuoE
COORDINATES: protein motif:HMM:NF014164.2
COORDINATES: similar to AA sequence:RefSeq:WP_012209352.1
GO:0097367 - carbohydrate derivative binding [Evidence IEA]
GO:1901135 - carbohydrate derivative metabolic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF013126.2
glycoside hydrolase family 3 N-terminal domain-containing protein
COORDINATES: protein motif:HMM:NF012692.2
COORDINATES: similar to AA sequence:RefSeq:WP_014296532.1
COORDINATES: similar to AA sequence:RefSeq:WP_014296531.1
COORDINATES: similar to AA sequence:RefSeq:WP_014296530.1
COORDINATES: similar to AA sequence:RefSeq:WP_014296529.1
COORDINATES: similar to AA sequence:RefSeq:WP_014296527.1
GO:0004565 - beta-galactosidase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014296948.1
COORDINATES: protein motif:HMM:NF039907.1
COORDINATES: protein motif:HMM:TIGR01083.1
GO:0003906 - DNA-(apurinic or apyrimidinic site) endonuclease activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF016357.2
GO:0047355 - CDP-glycerol glycerophosphotransferase activity [Evidence IEA]
CDP-glycerol glycerophosphotransferase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_002465978.1
GO:0047348 - glycerol-3-phosphate cytidylyltransferase activity [Evidence IEA]
glycerol-3-phosphate cytidylyltransferase
COORDINATES: protein motif:HMM:NF024811.2
COORDINATES: similar to AA sequence:RefSeq:WP_012208337.1
COORDINATES: protein motif:HMM:NF041004.1
COORDINATES: similar to AA sequence:RefSeq:WP_014296513.1
COORDINATES: similar to AA sequence:RefSeq:WP_014296512.1
COORDINATES: similar to AA sequence:RefSeq:WP_014296511.1
COORDINATES: similar to AA sequence:RefSeq:WP_014296510.1
COORDINATES: similar to AA sequence:RefSeq:WP_014296509.1
COORDINATES: protein motif:HMM:NF025038.2
COORDINATES: protein motif:HMM:NF012798.2
GO:0015074 - DNA integration [Evidence IEA]; GO:0006310 - DNA recombination [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012209119.1
COORDINATES: protein motif:HMM:TIGR01490.1
COORDINATES: similar to AA sequence:RefSeq:WP_012209215.1
COORDINATES: protein motif:HMM:TIGR00492.1
GO:0008784 - alanine racemase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012209435.1
GO:0003677 - DNA binding [Evidence IEA]; GO:0003917 - DNA topoisomerase type I (single strand cut, ATP-independent) activity [Evidence IEA]
GO:0006260 - DNA replication [Evidence IEA]; GO:0006265 - DNA topological change [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR01205.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0008716 - D-alanine-D-alanine ligase activity [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]
iron-containing alcohol dehydrogenase family protein
COORDINATES: protein motif:HMM:NF012521.2
COORDINATES: protein motif:HMM:NF015962.2
COORDINATES: protein motif:HMM:NF024545.2
COORDINATES: protein motif:HMM:NF020031.2
COORDINATES: protein motif:HMM:NF014666.2
COORDINATES: protein motif:HMM:NF018530.2
COORDINATES: protein motif:HMM:NF014629.2
23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH
COORDINATES: protein motif:HMM:NF013279.2
FtsW/RodA/SpoVE family cell cycle protein
COORDINATES: protein motif:HMM:NF022188.2
COORDINATES: protein motif:HMM:NF001452.0
GO:0003864 - 3-methyl-2-oxobutanoate hydroxymethyltransferase activity [Evidence IEA]
GO:0015940 - pantothenate biosynthetic process [Evidence IEA]
3-methyl-2-oxobutanoate hydroxymethyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_012209172.1
GO:0004077 - biotin-[acetyl-CoA-carboxylase] ligase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012209173.1
GO:0006166 - purine ribonucleoside salvage [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012209174.1
COORDINATES: protein motif:HMM:NF013618.2
lytic transglycosylase domain-containing protein
COORDINATES: protein motif:HMM:TIGR00206.1
GO:0009431 - bacterial-type flagellum basal body, MS ring [Evidence IEA]
flagellar basal-body MS-ring/collar protein FliF
COORDINATES: similar to AA sequence:RefSeq:WP_012209177.1
GO:0009433 - bacterial-type flagellum basal body, C ring [Evidence IEA]
GO:0006935 - chemotaxis [Evidence IEA]; GO:0001539 - cilium or flagellum-dependent cell motility [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_018035956.1
COORDINATES: similar to AA sequence:RefSeq:WP_012209182.1
GO:0008990 - rRNA (guanine-N2-)-methyltransferase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012209183.1
GO:0052381 - tRNA dimethylallyltransferase activity [Evidence IEA]
tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA
COORDINATES: similar to AA sequence:RefSeq:WP_012209184.1
GO:0006378 - mRNA polyadenylation [Evidence IEA]; GO:0016070 - RNA metabolic process [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR03156.1
COORDINATES: protein motif:HMM:NF013700.2
COORDINATES: similar to AA sequence:RefSeq:WP_012209186.1
GO:0004478 - methionine adenosyltransferase activity [Evidence IEA]
GO:0006556 - S-adenosylmethionine biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00029.2
COORDINATES: protein motif:HMM:NF012965.2
bifunctional 5,10-methylenetetrahydrofolate dehydrogenase/5,10-methenyltetrahydrofolate cyclohydrolase
COORDINATES: protein motif:HMM:NF018633.2
COORDINATES: similar to AA sequence:RefSeq:WP_012209695.1
COORDINATES: protein motif:HMM:NF013350.2
GO:0016884 - carbon-nitrogen ligase activity, with glutamine as amido-N-donor [Evidence IEA]
GO:0042823 - pyridoxal phosphate biosynthetic process [Evidence IEA]
pyridoxal 5'-phosphate synthase glutaminase subunit PdxT
COORDINATES: similar to AA sequence:RefSeq:WP_011303857.1
pyridoxal 5'-phosphate synthase lyase subunit PdxS
COORDINATES: similar to AA sequence:RefSeq:WP_012209151.1
COORDINATES: protein motif:HMM:TIGR00589.1
COORDINATES: protein motif:HMM:NF014074.2
ATP-dependent Clp protease proteolytic subunit
COORDINATES: similar to AA sequence:RefSeq:WP_012208546.1
COORDINATES: similar to AA sequence:RefSeq:WP_012208547.1
COORDINATES: similar to AA sequence:RefSeq:WP_012208138.1
COORDINATES: protein motif:HMM:NF014045.2
COORDINATES: protein motif:HMM:NF019604.2
COORDINATES: protein motif:HMM:NF015948.2
COORDINATES: similar to AA sequence:RefSeq:WP_012209637.1
folate family ECF transporter S component
COORDINATES: similar to AA sequence:RefSeq:WP_004111744.1
COORDINATES: protein motif:HMM:NF015515.2
COORDINATES: similar to AA sequence:RefSeq:WP_012208295.1
energy-coupling factor transporter transmembrane component T
COORDINATES: similar to AA sequence:RefSeq:WP_012208854.1
COORDINATES: similar to AA sequence:RefSeq:WP_014295951.1
COORDINATES: similar to AA sequence:RefSeq:WP_012209461.1
COORDINATES: similar to AA sequence:RefSeq:WP_012209022.1
COORDINATES: protein motif:HMM:TIGR00719.1
GO:0003941 - L-serine ammonia-lyase activity [Evidence IEA]
GO:0006094 - gluconeogenesis [Evidence IEA]; GO:0006565 - L-serine catabolic process [Evidence IEA]
L-serine ammonia-lyase, iron-sulfur-dependent subunit beta
COORDINATES: protein motif:HMM:TIGR00718.1
COORDINATES: similar to AA sequence:RefSeq:WP_012208245.1
GO:0051920 - peroxiredoxin activity [Evidence IEA]; GO:0008379 - thioredoxin peroxidase activity [Evidence IEA]
GO:0098869 - cellular oxidant detoxification [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012207946.1
COORDINATES: protein motif:HMM:NF019320.2
GO:0020037 - heme binding [Evidence IEA]
heme NO-binding domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_012209442.1
GO:0008763 - UDP-N-acetylmuramate-L-alanine ligase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF015022.2
UDP-N-acetylglucosamine--N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase
COORDINATES: protein motif:HMM:TIGR01087.1
GO:0008764 - UDP-N-acetylmuramoylalanine-D-glutamate ligase activity [Evidence IEA]
UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase
COORDINATES: similar to AA sequence:RefSeq:WP_012208853.1
COORDINATES: nucleotide motif:Rfam:14.4:RF01055
molybdenum cofactor riboswitch; Derived by automated computational analysis using gene prediction method: cmsearch.
COORDINATES: similar to AA sequence:RefSeq:WP_012208230.1
aldehyde ferredoxin oxidoreductase family protein
COORDINATES: protein motif:HMM:TIGR01687.1
GO:0006777 - Mo-molybdopterin cofactor biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF011068.0
GO:0032324 - molybdopterin cofactor biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00260.1
GO:0004795 - threonine synthase activity [Evidence IEA]
GO:0009088 - threonine biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014297138.1
COORDINATES: protein motif:HMM:NF013134.2
xanthine dehydrogenase family protein subunit M
COORDINATES: similar to AA sequence:RefSeq:WP_012208159.1
COORDINATES: protein motif:HMM:NF039831.1
COORDINATES: protein motif:HMM:NF014623.2
COORDINATES: protein motif:HMM:NF013239.2
COORDINATES: protein motif:HMM:TIGR02168.1
GO:0030261 - chromosome condensation [Evidence IEA]; GO:0007059 - chromosome segregation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014296647.1
COORDINATES: protein motif:HMM:NF024671.2
COORDINATES: protein motif:HMM:NF025084.2
COORDINATES: protein motif:HMM:NF024700.2
COORDINATES: similar to AA sequence:RefSeq:WP_014297489.1
COORDINATES: protein motif:HMM:NF016309.2
COORDINATES: protein motif:HMM:NF019348.2
COORDINATES: protein motif:HMM:NF024832.2
COORDINATES: protein motif:HMM:NF024831.2
COORDINATES: protein motif:HMM:NF016145.2
polysaccharide pyruvyl transferase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_014296671.1
COORDINATES: similar to AA sequence:RefSeq:WP_014296702.1
GO:0008446 - GDP-mannose 4,6-dehydratase activity [Evidence IEA]
GO:0000271 - polysaccharide biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014296665.1
COORDINATES: protein motif:HMM:NF013530.2
internal stop; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: protein motif:HMM:NF012360.2
COORDINATES: protein motif:HMM:NF007640.0
COORDINATES: protein motif:HMM:TIGR03022.1
COORDINATES: similar to AA sequence:RefSeq:WP_012209617.1
GO:0004817 - cysteine-tRNA ligase activity [Evidence IEA]
GO:0006423 - cysteinyl-tRNA aminoacylation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012209616.1
COORDINATES: protein motif:HMM:NF025619.2
COORDINATES: protein motif:HMM:NF018884.2
GO:0016791 - phosphatase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_010734488.1
GO:0004126 - cytidine deaminase activity [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA]
GO:0009972 - cytidine deamination [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012209613.1
COORDINATES: similar to AA sequence:RefSeq:WP_012209612.1
COORDINATES: similar to AA sequence:RefSeq:WP_012209611.1
GO:0005515 - protein binding [Evidence IEA]
GO:0006457 - protein folding [Evidence IEA]; GO:0009408 - response to heat [Evidence IEA]
COORDINATES: protein motif:HMM:NF013212.2
GO:0000774 - adenyl-nucleotide exchange factor activity [Evidence IEA]; GO:0051087 - chaperone binding [Evidence IEA]; GO:0042803 - protein homodimerization activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF013768.2
COORDINATES: protein motif:HMM:NF001126.0
GO:0005524 - ATP binding [Evidence IEA]; GO:0016874 - ligase activity [Evidence IEA]
GO:0009058 - biosynthetic process [Evidence IEA]; GO:0051301 - cell division [Evidence IEA]; GO:0008360 - regulation of cell shape [Evidence IEA]
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2, 6-diaminopimelate ligase
COORDINATES: protein motif:HMM:TIGR01143.1
GO:0047480 - UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D-alanine ligase activity [Evidence IEA]
UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D- alanine ligase
COORDINATES: protein motif:HMM:TIGR00445.1
GO:0008963 - phospho-N-acetylmuramoyl-pentapeptide-transferase activity [Evidence IEA]
phospho-N-acetylmuramoyl-pentapeptide- transferase
COORDINATES: protein motif:HMM:TIGR02385.1
type II toxin-antitoxin system mRNA interferase toxin, RelE/StbE family
COORDINATES: protein motif:HMM:NF014003.2
COORDINATES: similar to AA sequence:RefSeq:WP_012208567.1
GO:0042132 - fructose 1,6-bisphosphate 1-phosphatase activity [Evidence IEA]
GO:0006094 - gluconeogenesis [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012208568.1
GO:0004177 - aminopeptidase activity [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012208769.1
polysaccharide biosynthesis tyrosine autokinase
COORDINATES: similar to AA sequence:RefSeq:WP_012208768.1
COORDINATES: protein motif:HMM:NF014732.2
Wzz/FepE/Etk N-terminal domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_012209093.1
COORDINATES: similar to AA sequence:RefSeq:WP_076611870.1
GO:0015074 - DNA integration [Evidence IEA]
incomplete; partial in the middle of a contig; missing N-terminus and C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: protein motif:HMM:NF013681.2
COORDINATES: protein motif:HMM:NF025072.2
COORDINATES: protein motif:HMM:NF020133.2
COORDINATES: protein motif:HMM:TIGR00441.1
GO:0008968 - D-sedoheptulose 7-phosphate isomerase activity [Evidence IEA]
GO:0009244 - lipopolysaccharide core region biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF012695.2
COORDINATES: protein motif:HMM:NF021616.2
COORDINATES: protein motif:HMM:NF022597.2
COORDINATES: protein motif:HMM:NF019487.2
COORDINATES: protein motif:HMM:TIGR03025.1
COORDINATES: protein motif:HMM:NF024871.2
COORDINATES: protein motif:HMM:NF024927.2
COORDINATES: similar to AA sequence:RefSeq:WP_012208759.1
COORDINATES: protein motif:HMM:NF024868.2
GO:0016779 - nucleotidyltransferase activity [Evidence IEA]
GO:0009058 - biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF013227.2
COORDINATES: protein motif:HMM:TIGR03570.1
COORDINATES: protein motif:HMM:NF012936.2
asparagine synthase C-terminal domain-containing protein
COORDINATES: protein motif:HMM:NF021127.2
COORDINATES: similar to AA sequence:RefSeq:WP_004220743.1
GO:0003978 - UDP-glucose 4-epimerase activity [Evidence IEA]
GO:0006012 - galactose metabolic process [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR02532.1
COORDINATES: similar to AA sequence:RefSeq:WP_012209515.1
COORDINATES: similar to AA sequence:RefSeq:WP_012208060.1
Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatB
COORDINATES: similar to AA sequence:RefSeq:WP_012208061.1
Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatA
COORDINATES: similar to AA sequence:RefSeq:WP_012208062.1
rhomboid family intramembrane serine protease
COORDINATES: similar to AA sequence:RefSeq:WP_012209033.1
COORDINATES: protein motif:HMM:NF013308.2
GO:0050518 - 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase activity [Evidence IEA]
2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_012209600.1
COORDINATES: similar to AA sequence:RefSeq:WP_012209125.1
GO:0030288 - outer membrane-bounded periplasmic space [Evidence IEA]
GO:0045861 - negative regulation of proteolysis [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012209124.1
COORDINATES: protein motif:HMM:NF025217.2
COORDINATES: protein motif:HMM:TIGR00041.1
GO:0004798 - thymidylate kinase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF024634.2
COORDINATES: similar to AA sequence:RefSeq:WP_016290574.1
heavy metal-binding domain-containing protein
COORDINATES: protein motif:HMM:NF024091.2
COORDINATES: protein motif:HMM:NF012610.2
COORDINATES: similar to AA sequence:RefSeq:WP_012209351.1
GO:0008448 - N-acetylglucosamine-6-phosphate deacetylase activity [Evidence IEA]
GO:0006040 - amino sugar metabolic process [Evidence IEA]
N-acetylglucosamine-6-phosphate deacetylase
COORDINATES: protein motif:HMM:TIGR00091.1
GO:0008176 - tRNA (guanine-N7-)-methyltransferase activity [Evidence IEA]
tRNA (guanosine(46)-N7)-methyltransferase TrmB
COORDINATES: similar to AA sequence:RefSeq:WP_014296768.1
COORDINATES: similar to AA sequence:RefSeq:WP_014296767.1
COORDINATES: protein motif:HMM:NF012364.2
GO:0003677 - DNA binding [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]
DNA polymerase domain-containing protein
COORDINATES: protein motif:HMM:NF009829.0
COORDINATES: protein motif:HMM:NF006878.0
GO:0051539 - 4 iron, 4 sulfur cluster binding [Evidence IEA]; GO:0008987 - quinolinate synthetase A activity [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00078.1
GO:0004514 - nicotinate-nucleotide diphosphorylase (carboxylating) activity [Evidence IEA]
GO:0019363 - pyridine nucleotide biosynthetic process [Evidence IEA]
carboxylating nicotinate-nucleotide diphosphorylase
COORDINATES: similar to AA sequence:RefSeq:WP_012208490.1
COORDINATES: similar to AA sequence:RefSeq:WP_012208489.1
COORDINATES: similar to AA sequence:RefSeq:WP_012208487.1
GO:0031071 - cysteine desulfurase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012208486.1
SUF system NifU family Fe-S cluster assembly protein
COORDINATES: protein motif:HMM:NF013319.2
COORDINATES: protein motif:HMM:NF014046.2
COORDINATES: similar to AA sequence:RefSeq:WP_012208439.1
GO:0009166 - nucleotide catabolic process [Evidence IEA]
5'-nucleotidase C-terminal domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_002832300.1
COORDINATES: protein motif:HMM:NF038013.1
COORDINATES: similar to AA sequence:RefSeq:WP_012207865.1
GO:0004139 - deoxyribose-phosphate aldolase activity [Evidence IEA]
GO:0009264 - deoxyribonucleotide catabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012209426.1
COORDINATES: similar to AA sequence:RefSeq:WP_012209267.1
COORDINATES: protein motif:HMM:TIGR00172.1
COORDINATES: protein motif:HMM:NF019099.2
COORDINATES: protein motif:HMM:NF018685.2
COORDINATES: similar to AA sequence:RefSeq:WP_012209263.1
COORDINATES: similar to AA sequence:RefSeq:WP_012209262.1
AmmeMemoRadiSam system radical SAM enzyme
COORDINATES: similar to AA sequence:RefSeq:WP_012209261.1
COORDINATES: similar to AA sequence:RefSeq:WP_012209482.1
GO:0004730 - pseudouridylate synthase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012209481.1
GO:0019843 - rRNA binding [Evidence IEA]
COORDINATES: protein motif:HMM:NF020252.2
COORDINATES: protein motif:HMM:NF019507.2
COORDINATES: similar to AA sequence:RefSeq:WP_012208131.1
COORDINATES: similar to AA sequence:RefSeq:WP_012208132.1
COORDINATES: protein motif:HMM:NF025885.2
sigma-54 dependent transcriptional regulator
COORDINATES: protein motif:HMM:NF024816.2
COORDINATES: protein motif:HMM:NF023128.2
COORDINATES: protein motif:HMM:NF013232.2
COORDINATES: protein motif:HMM:NF027875.2
isoamylase early set domain-containing protein
COORDINATES: protein motif:HMM:NF013417.2
ribosomal L7Ae/L30e/S12e/Gadd45 family protein
COORDINATES: similar to AA sequence:RefSeq:WP_012208106.1
COORDINATES: similar to AA sequence:RefSeq:WP_012209588.1
DegT/DnrJ/EryC1/StrS family aminotransferase
COORDINATES: similar to AA sequence:RefSeq:WP_012209587.1
nucleoside-diphosphate sugar epimerase/dehydratase
COORDINATES: protein motif:HMM:NF013146.2
COORDINATES: similar to AA sequence:RefSeq:WP_002286835.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0004612 - phosphoenolpyruvate carboxykinase (ATP) activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012209376.1
COORDINATES: similar to AA sequence:RefSeq:WP_012208481.1
COORDINATES: protein motif:HMM:NF024116.2
COORDINATES: similar to AA sequence:RefSeq:WP_012209005.1
COORDINATES: similar to AA sequence:RefSeq:WP_012209165.1
COORDINATES: similar to AA sequence:RefSeq:WP_012208184.1
COORDINATES: protein motif:HMM:NF015380.2
COORDINATES: similar to AA sequence:RefSeq:WP_012207939.1
GO:0006402 - mRNA catabolic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF014668.2
GO:0006282 - regulation of DNA repair [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012207937.1
GO:0008094 - ATP-dependent activity, acting on DNA [Evidence IEA]; GO:0003677 - DNA binding [Evidence IEA]
GO:0006310 - DNA recombination [Evidence IEA]; GO:0006281 - DNA repair [Evidence IEA]; GO:0009432 - SOS response [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012207936.1
GO:0008664 - 2'-5'-RNA ligase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012207935.1
GO:0008444 - CDP-diacylglycerol-glycerol-3-phosphate 3-phosphatidyltransferase activity [Evidence IEA]
GO:0008654 - phospholipid biosynthetic process [Evidence IEA]
CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_012207934.1
GO:0051539 - 4 iron, 4 sulfur cluster binding [Evidence IEA]; GO:1904047 - S-adenosyl-L-methionine binding [Evidence IEA]; GO:0008172 - S-methyltransferase activity [Evidence IEA]; GO:0016782 - transferase activity, transferring sulphur-containing groups [Evidence IEA]
GO:0018339 - peptidyl-L-beta-methylthioaspartic acid biosynthetic process from peptidyl-aspartic acid [Evidence IEA]
30S ribosomal protein S12 methylthiotransferase RimO
COORDINATES: similar to AA sequence:RefSeq:WP_012208796.1
alanine/ornithine racemase family PLP-dependent enzyme
COORDINATES: similar to AA sequence:RefSeq:WP_012208850.1
cation diffusion facilitator family transporter
COORDINATES: protein motif:HMM:NF014826.2
COORDINATES: protein motif:HMM:NF012694.2
type II secretion system F family protein
COORDINATES: protein motif:HMM:NF012485.2
type II secretory pathway, component PulD
COORDINATES: similar to AA sequence:RefSeq:WP_012208908.1
COORDINATES: similar to AA sequence:RefSeq:WP_012208910.1
COORDINATES: similar to AA sequence:RefSeq:WP_012208911.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0004820 - glycine-tRNA ligase activity [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]
GO:0006426 - glycyl-tRNA aminoacylation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012208912.1
GO:0009345 - glycine-tRNA ligase complex [Evidence IEA]
GO:0004820 - glycine-tRNA ligase activity [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR03491.1
TM0106 family RecB-like putative nuclease
COORDINATES: similar to AA sequence:RefSeq:WP_012208145.1
GO:0005525 - GTP binding [Evidence IEA]; GO:0003723 - RNA binding [Evidence IEA]
COORDINATES: protein motif:HMM:NF013335.2
COORDINATES: similar to AA sequence:RefSeq:WP_010744499.1
COORDINATES: protein motif:HMM:NF024829.2
HlyD family efflux transporter periplasmic adaptor subunit
COORDINATES: protein motif:HMM:NF014385.2
COORDINATES: similar to AA sequence:RefSeq:WP_012208998.1
carboxypeptidase-like regulatory domain-containing protein
COORDINATES: protein motif:HMM:TIGR00546.1
GO:0016410 - N-acyltransferase activity [Evidence IEA]
GO:0042158 - lipoprotein biosynthetic process [Evidence IEA]; GO:0006497 - protein lipidation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012208375.1
COORDINATES: protein motif:HMM:TIGR00040.1
COORDINATES: similar to AA sequence:RefSeq:WP_012208004.1
COORDINATES: protein motif:HMM:NF013100.2
GO:0008658 - penicillin binding [Evidence IEA]
penicillin-binding transpeptidase domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_007115517.1
COORDINATES: similar to AA sequence:RefSeq:WP_012209286.1
GO:0008821 - crossover junction endodeoxyribonuclease activity [Evidence IEA]
crossover junction endodeoxyribonuclease RuvC
COORDINATES: similar to AA sequence:RefSeq:WP_012208689.1
GO:0006886 - intracellular protein transport [Evidence IEA]; GO:0017038 - protein import [Evidence IEA]; GO:0006605 - protein targeting [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014296881.1
COORDINATES: protein motif:HMM:TIGR00797.1
COORDINATES: protein motif:HMM:TIGR00726.1
COORDINATES: similar to AA sequence:RefSeq:WP_012209655.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0003952 - NAD+ synthase (glutamine-hydrolyzing) activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014296316.1
hybrid sensor histidine kinase/response regulator
COORDINATES: similar to AA sequence:RefSeq:WP_012208480.1
GO:0004332 - fructose-bisphosphate aldolase activity [Evidence IEA]
class II fructose-1,6-bisphosphate aldolase
COORDINATES: similar to AA sequence:RefSeq:WP_012209558.1
COORDINATES: similar to AA sequence:RefSeq:WP_012209559.1
COORDINATES: similar to AA sequence:RefSeq:WP_012209560.1
GO:0061710 - L-threonylcarbamoyladenylate synthase [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012209289.1
COORDINATES: similar to AA sequence:RefSeq:WP_012209221.1
COORDINATES: similar to AA sequence:RefSeq:WP_012209220.1
GO:0004014 - adenosylmethionine decarboxylase activity [Evidence IEA]
GO:0008295 - spermidine biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF002010.0
COORDINATES: protein motif:HMM:NF019401.2
COORDINATES: protein motif:HMM:TIGR00732.1
GO:0009294 - DNA-mediated transformation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012209240.1
GO:0015144 - carbohydrate transmembrane transporter activity [Evidence IEA]
GO:0008643 - carbohydrate transport [Evidence IEA]; GO:0055085 - transmembrane transport [Evidence IEA]
maltose/maltodextrin ABC transporter substrate-binding protein MalE
COORDINATES: protein motif:HMM:NF006988.0
COORDINATES: protein motif:HMM:NF012241.2
COORDINATES: protein motif:HMM:NF033542.1
COORDINATES: protein motif:HMM:TIGR00235.1
GO:0004849 - uridine kinase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012208407.1
GO:0004654 - polyribonucleotide nucleotidyltransferase activity [Evidence IEA]
polyribonucleotide nucleotidyltransferase
COORDINATES: protein motif:HMM:NF017044.2
COORDINATES: similar to AA sequence:RefSeq:WP_014296923.1
COORDINATES: similar to AA sequence:RefSeq:WP_014296922.1
COORDINATES: similar to AA sequence:RefSeq:WP_012208784.1
MarR family winged helix-turn-helix transcriptional regulator
COORDINATES: similar to AA sequence:RefSeq:WP_012208786.1
COORDINATES: similar to AA sequence:RefSeq:WP_012208787.1
COORDINATES: similar to AA sequence:RefSeq:WP_012209231.1
GO:0022626 - cytosolic ribosome [Evidence IEA]; GO:0005840 - ribosome [Evidence IEA]
GO:0045182 - translation regulator activity [Evidence IEA]
GO:0009386 - translational attenuation [Evidence IEA]
ribosome-associated translation inhibitor RaiA
COORDINATES: protein motif:HMM:NF024214.2
COORDINATES: protein motif:HMM:TIGR01178.1
GO:0000034 - adenine deaminase activity [Evidence IEA]
GO:0006168 - adenine salvage [Evidence IEA]
COORDINATES: protein motif:HMM:NF014647.2
COORDINATES: protein motif:HMM:NF014684.2
COORDINATES: protein motif:HMM:NF014669.2
COORDINATES: protein motif:HMM:TIGR04350.1
GO:0003824 - catalytic activity [Evidence IEA]; GO:0030170 - pyridoxal phosphate binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012208926.1
GO:0008108 - UDP-glucose:hexose-1-phosphate uridylyltransferase activity [Evidence IEA]
galactose-1-phosphate uridylyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_012208925.1
COORDINATES: protein motif:HMM:NF012780.2
COORDINATES: similar to AA sequence:RefSeq:WP_014296516.1
COORDINATES: similar to AA sequence:RefSeq:WP_012209127.1
replication-associated recombination protein A
COORDINATES: protein motif:HMM:NF013633.2
COORDINATES: similar to AA sequence:RefSeq:WP_012209128.1
COORDINATES: similar to AA sequence:RefSeq:WP_012209129.1
COORDINATES: protein motif:HMM:NF012706.2
COORDINATES: similar to AA sequence:RefSeq:WP_012209131.1
COORDINATES: similar to AA sequence:RefSeq:WP_012209132.1
COORDINATES: protein motif:HMM:NF015052.2
glucodextranase DOMON-like domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_004847070.1
GO:0004592 - pantoate-beta-alanine ligase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF015438.2
GO:0003824 - catalytic activity [Evidence IEA]; GO:0030151 - molybdenum ion binding [Evidence IEA]; GO:0030170 - pyridoxal phosphate binding [Evidence IEA]
COORDINATES: protein motif:HMM:NF024921.2
COORDINATES: protein motif:HMM:TIGR02666.1
COORDINATES: similar to AA sequence:RefSeq:WP_012208221.1
cyclic pyranopterin monophosphate synthase MoaC
MogA/MoaB family molybdenum cofactor biosynthesis protein
COORDINATES: protein motif:HMM:NF015418.2
COORDINATES: protein motif:HMM:TIGR04317.1
tungsten cofactor oxidoreductase radical SAM maturase
COORDINATES: protein motif:HMM:NF013887.2
COORDINATES: similar to AA sequence:RefSeq:WP_012209017.1
COORDINATES: similar to AA sequence:RefSeq:WP_012208686.1
GO:0005384 - manganese ion transmembrane transporter activity [Evidence IEA]
GO:0030026 - cellular manganese ion homeostasis [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014297528.1
COORDINATES: protein motif:HMM:NF024157.2
COORDINATES: similar to AA sequence:RefSeq:WP_014297122.1
COORDINATES: similar to AA sequence:RefSeq:WP_014297123.1
COORDINATES: similar to AA sequence:RefSeq:WP_012208670.1
COORDINATES: protein motif:HMM:NF013479.2
EscU/YscU/HrcU family type III secretion system export apparatus switch protein
COORDINATES: protein motif:HMM:NF025910.2
COORDINATES: similar to AA sequence:RefSeq:WP_014296918.1
COORDINATES: similar to AA sequence:RefSeq:WP_012209658.1
GO:0004748 - ribonucleoside-diphosphate reductase activity, thioredoxin disulfide as acceptor [Evidence IEA]
adenosylcobalamin-dependent ribonucleoside-diphosphate reductase
COORDINATES: similar to AA sequence:RefSeq:WP_014297259.1
COORDINATES: similar to AA sequence:RefSeq:WP_012209499.1
WecB/TagA/CpsF family glycosyltransferase
COORDINATES: protein motif:HMM:TIGR00763.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0016887 - ATP hydrolysis activity [Evidence IEA]; GO:0004252 - serine-type endopeptidase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012209164.1
ribosome biogenesis GTP-binding protein YihA/YsxC
COORDINATES: similar to AA sequence:RefSeq:WP_012208985.1
COORDINATES: similar to AA sequence:RefSeq:WP_012208986.1
2-amino-4-oxopentanoate thiolase subunit OrtA
COORDINATES: similar to AA sequence:RefSeq:WP_012208987.1
2-amino-4-oxopentanoate thiolase subunit OrtB
COORDINATES: similar to AA sequence:RefSeq:WP_012208988.1
COORDINATES: similar to AA sequence:RefSeq:WP_012208989.1
D-ornithine 4,5-aminomutase subunit OraE
COORDINATES: similar to AA sequence:RefSeq:WP_012209211.1
tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE
COORDINATES: protein motif:HMM:NF024812.2
COORDINATES: similar to AA sequence:RefSeq:WP_012208014.1
GO:0050515 - 4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase activity [Evidence IEA]
GO:0016114 - terpenoid biosynthetic process [Evidence IEA]
4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase
COORDINATES: similar to AA sequence:RefSeq:WP_012209433.1
GO:0004298 - threonine-type endopeptidase activity [Evidence IEA]
GO:0051603 - proteolysis involved in protein catabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012207951.1
COORDINATES: similar to AA sequence:RefSeq:WP_012207954.1
COORDINATES: similar to AA sequence:RefSeq:WP_012207955.1
COORDINATES: similar to AA sequence:RefSeq:WP_012207956.1
GO:0004385 - guanylate kinase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF013365.2
GO:0003677 - DNA binding [Evidence IEA]; GO:0003899 - DNA-directed 5'-3' RNA polymerase activity [Evidence IEA]
DNA-directed RNA polymerase subunit omega
COORDINATES: protein motif:HMM:NF027583.2
COORDINATES: similar to AA sequence:RefSeq:WP_012208425.1
COORDINATES: similar to AA sequence:RefSeq:WP_012208424.1
COORDINATES: similar to AA sequence:RefSeq:WP_012208423.1
2-ketoisovalerate ferredoxin oxidoreductase subunit alpha
COORDINATES: similar to AA sequence:RefSeq:WP_012208422.1
COORDINATES: similar to AA sequence:RefSeq:WP_012209578.1
homocysteine S-methyltransferase family protein
COORDINATES: protein motif:HMM:TIGR01198.1
GO:0017057 - 6-phosphogluconolactonase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF013670.2
COORDINATES: similar to AA sequence:RefSeq:WP_012208053.1
chemotaxis response regulator protein-glutamate methylesterase
COORDINATES: protein motif:HMM:NF013391.2
COORDINATES: similar to AA sequence:RefSeq:WP_012208055.1
COORDINATES: similar to AA sequence:RefSeq:WP_012208056.1
2-oxoacid:ferredoxin oxidoreductase subunit beta
COORDINATES: similar to AA sequence:RefSeq:WP_012208057.1
COORDINATES: protein motif:HMM:TIGR00539.1
GO:0051989 - coproporphyrinogen dehydrogenase activity [Evidence IEA]
GO:0006779 - porphyrin-containing compound biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012209311.1
COORDINATES: similar to AA sequence:RefSeq:WP_012209483.1
GO:0003919 - FMN adenylyltransferase activity [Evidence IEA]
GO:0006747 - FAD biosynthetic process [Evidence IEA]; GO:0009398 - FMN biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF002872.1
GO:0006002 - fructose 6-phosphate metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012208578.1
GO:0000276 - mitochondrial proton-transporting ATP synthase complex, coupling factor F(o) [Evidence IEA]; GO:0045264 - plasma membrane proton-transporting ATP synthase complex, coupling factor F(o) [Evidence IEA]; GO:0045263 - proton-transporting ATP synthase complex, coupling factor F(o) [Evidence IEA]
GO:0046933 - proton-transporting ATP synthase activity, rotational mechanism [Evidence IEA]
GO:0015986 - proton motive force-driven ATP synthesis [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012208577.1
COORDINATES: protein motif:HMM:TIGR01144.1
COORDINATES: protein motif:HMM:TIGR01145.1
GO:0000275 - mitochondrial proton-transporting ATP synthase complex, catalytic sector F(1) [Evidence IEA]; GO:0045262 - plasma membrane proton-transporting ATP synthase complex, catalytic core F(1) [Evidence IEA]; GO:0045261 - proton-transporting ATP synthase complex, catalytic core F(1) [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_016292873.1
COORDINATES: similar to AA sequence:RefSeq:WP_012208573.1
COORDINATES: similar to AA sequence:RefSeq:WP_012208572.1
COORDINATES: similar to AA sequence:RefSeq:WP_012208571.1
COORDINATES: similar to AA sequence:RefSeq:WP_012208072.1
GO:0004018 - N6-(1,2-dicarboxyethyl)AMP AMP-lyase (fumarate-forming) activity [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00115.1
GO:0005854 - nascent polypeptide-associated complex [Evidence IEA]
GO:0003755 - peptidyl-prolyl cis-trans isomerase activity [Evidence IEA]; GO:0051082 - unfolded protein binding [Evidence IEA]
GO:0051083 - 'de novo' cotranslational protein folding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012209000.1
COORDINATES: protein motif:HMM:NF017690.2
COORDINATES: similar to AA sequence:RefSeq:WP_012209477.1
flagellar hook-basal body complex protein FliE
COORDINATES: similar to AA sequence:RefSeq:WP_012209476.1
GO:0009425 - bacterial-type flagellum basal body [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012209475.1
GO:0009429 - bacterial-type flagellum basal body, proximal rod [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012209236.1
COORDINATES: similar to AA sequence:RefSeq:WP_012209234.1
COORDINATES: similar to AA sequence:RefSeq:WP_012208637.1
GO:0046523 - S-methyl-5-thioribose-1-phosphate isomerase activity [Evidence IEA]
GO:0019509 - L-methionine salvage from methylthioadenosine [Evidence IEA]
S-methyl-5-thioribose-1-phosphate isomerase
COORDINATES: nucleotide motif:Rfam:14.4:RF00023
COORDINATES: similar to AA sequence:RefSeq:WP_014295739.1
COORDINATES: similar to AA sequence:RefSeq:WP_012209239.1
COORDINATES: protein motif:HMM:NF013347.2
class I SAM-dependent RNA methyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_012209573.1
GO:0004845 - uracil phosphoribosyltransferase activity [Evidence IEA]
GO:0008655 - pyrimidine-containing compound salvage [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012209348.1
GO:0008890 - glycine C-acetyltransferase activity [Evidence IEA]; GO:0030170 - pyridoxal phosphate binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012209347.1
GO:0008743 - L-threonine 3-dehydrogenase activity [Evidence IEA]
GO:0006567 - threonine catabolic process [Evidence IEA]
transglycosylase domain-containing protein
COORDINATES: protein motif:HMM:NF021610.2
TIGR03936 family radical SAM-associated protein
PP2C family protein-serine/threonine phosphatase
COORDINATES: similar to AA sequence:RefSeq:WP_012208634.1
YebC/PmpR family DNA-binding transcriptional regulator
COORDINATES: similar to AA sequence:RefSeq:WP_012208636.1
protein-glutamate O-methyltransferase CheR
COORDINATES: protein motif:HMM:TIGR00077.1
GO:0004190 - aspartic-type endopeptidase activity [Evidence IEA]
GO:0009306 - protein secretion [Evidence IEA]; GO:0006508 - proteolysis [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012208563.1
COORDINATES: protein motif:HMM:NF014657.2
COORDINATES: similar to AA sequence:RefSeq:WP_012209630.1
COORDINATES: similar to AA sequence:RefSeq:WP_012209631.1
GO:0043811 - phosphate:acyl-[acyl carrier protein] acyltransferase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012209632.1
GO:0004360 - glutamine-fructose-6-phosphate transaminase (isomerizing) activity [Evidence IEA]
GO:0006040 - amino sugar metabolic process [Evidence IEA]; GO:0009252 - peptidoglycan biosynthetic process [Evidence IEA]
glutamine--fructose-6-phosphate transaminase (isomerizing)
COORDINATES: similar to AA sequence:RefSeq:WP_012209633.1
GO:0043022 - ribosome binding [Evidence IEA]
GO:0017148 - negative regulation of translation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012209634.1
COORDINATES: protein motif:HMM:NF004469.0
GO:0043752 - adenosylcobinamide kinase activity [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]
bifunctional adenosylcobinamide kinase/adenosylcobinamide-phosphate guanylyltransferase
COORDINATES: protein motif:HMM:NF014685.2
GO:0008818 - cobalamin 5'-phosphate synthase activity [Evidence IEA]
adenosylcobinamide-GDP ribazoletransferase
GO:0043755 - alpha-ribazole phosphatase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF012795.2
COORDINATES: protein motif:HMM:NF018305.2
GO:0000155 - phosphorelay sensor kinase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012209672.1
COORDINATES: protein motif:HMM:NF021374.2
COORDINATES: similar to AA sequence:RefSeq:WP_014296411.1
COORDINATES: similar to AA sequence:RefSeq:WP_014296979.1
COORDINATES: protein motif:HMM:NF021520.2
COORDINATES: similar to AA sequence:RefSeq:WP_000457386.1
COORDINATES: protein motif:HMM:NF016233.2
ribosomal-processing cysteine protease Prp
COORDINATES: similar to AA sequence:RefSeq:WP_016290819.1
COORDINATES: similar to AA sequence:RefSeq:WP_012208628.1
COORDINATES: similar to AA sequence:RefSeq:WP_002942223.1
COORDINATES: protein motif:HMM:TIGR01391.1
GO:0003896 - DNA primase activity [Evidence IEA]
GO:0006269 - DNA replication, synthesis of RNA primer [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012208624.1
GO:0016987 - sigma factor activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012208623.1
COORDINATES: protein motif:HMM:TIGR00905.1
GO:0005275 - amine transmembrane transporter activity [Evidence IEA]
GO:0015837 - amine transport [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012208728.1
GO:0016990 - arginine deiminase activity [Evidence IEA]
GO:0019546 - arginine deiminase pathway [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014296627.1
COORDINATES: protein motif:HMM:TIGR00801.1
COORDINATES: protein motif:HMM:NF022834.2
COORDINATES: protein motif:HMM:NF004760.0
COORDINATES: protein motif:HMM:NF018275.2
COORDINATES: protein motif:HMM:NF016115.2
COORDINATES: similar to AA sequence:RefSeq:WP_012208405.1
GO:0004791 - thioredoxin-disulfide reductase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012208404.1
COORDINATES: protein motif:HMM:NF015513.2
COORDINATES: protein motif:HMM:NF019474.2
COORDINATES: similar to AA sequence:RefSeq:WP_012209324.1
COORDINATES: protein motif:HMM:NF009920.0
GO:0045148 - tripeptide aminopeptidase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012209457.1
sodium ion-translocating decarboxylase subunit beta
COORDINATES: similar to AA sequence:RefSeq:WP_012209458.1
COORDINATES: similar to AA sequence:RefSeq:WP_012209459.1
2-oxoacid:acceptor oxidoreductase subunit alpha
COORDINATES: similar to AA sequence:RefSeq:WP_012207893.1
COORDINATES: similar to AA sequence:RefSeq:WP_012207892.1
COORDINATES: similar to AA sequence:RefSeq:WP_012207891.1
COORDINATES: similar to AA sequence:RefSeq:WP_012208406.1
COORDINATES: protein motif:HMM:NF014081.2
COORDINATES: similar to AA sequence:RefSeq:WP_012209521.1
COORDINATES: similar to AA sequence:RefSeq:WP_012209519.1
YgeY family selenium metabolism-linked hydrolase
COORDINATES: protein motif:HMM:NF014713.2
cytochrome c biogenesis CcdA family protein
COORDINATES: protein motif:HMM:NF024498.2
thioredoxin fold domain-containing protein
COORDINATES: protein motif:HMM:NF019623.2
PD-(D/E)XK nuclease domain-containing protein
COORDINATES: protein motif:HMM:NF012403.2
COORDINATES: similar to AA sequence:RefSeq:WP_012208211.1
COORDINATES: similar to AA sequence:RefSeq:WP_012208210.1
COORDINATES: similar to AA sequence:RefSeq:WP_012208209.1
transcription termination/antitermination NusG family protein
COORDINATES: similar to AA sequence:RefSeq:WP_013028894.1
COORDINATES: similar to AA sequence:RefSeq:WP_003225765.1
COORDINATES: nucleotide motif:Rfam:14.4:RF00557
ribosomal protein L10 leader region; Derived by automated computational analysis using gene prediction method: cmsearch.
COORDINATES: similar to AA sequence:RefSeq:WP_012208206.1
GO:0015934 - large ribosomal subunit [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012208205.1
COORDINATES: similar to AA sequence:RefSeq:WP_012208204.1
GO:0003677 - DNA binding [Evidence IEA]; GO:0003899 - DNA-directed 5'-3' RNA polymerase activity [Evidence IEA]; GO:0032549 - ribonucleoside binding [Evidence IEA]
DNA-directed RNA polymerase subunit beta
COORDINATES: similar to AA sequence:RefSeq:WP_012208203.1
DNA-directed RNA polymerase subunit beta'
COORDINATES: similar to AA sequence:RefSeq:WP_012207864.1
thiamine ABC transporter substrate-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_012208037.1
COORDINATES: protein motif:HMM:NF013408.2
COORDINATES: protein motif:HMM:NF013094.2
COORDINATES: similar to AA sequence:RefSeq:WP_012207914.1
GO:0004831 - tyrosine-tRNA ligase activity [Evidence IEA]
GO:0006437 - tyrosyl-tRNA aminoacylation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012207915.1
COORDINATES: protein motif:HMM:TIGR02605.1
COORDINATES: similar to AA sequence:RefSeq:WP_012209591.1
COORDINATES: similar to AA sequence:RefSeq:WP_012209592.1
COORDINATES: similar to AA sequence:RefSeq:WP_012209341.1
COORDINATES: protein motif:HMM:NF013632.2
COORDINATES: protein motif:HMM:NF013045.2
COORDINATES: similar to AA sequence:RefSeq:WP_012208216.1
COORDINATES: similar to AA sequence:RefSeq:WP_012208215.1
COORDINATES: protein motif:HMM:NF010009.0
DNA integrity scanning diadenylate cyclase DisA
COORDINATES: protein motif:HMM:TIGR00416.1
ATP-dependent Clp protease ATP-binding subunit
COORDINATES: similar to AA sequence:RefSeq:WP_012207931.1
COORDINATES: similar to AA sequence:RefSeq:WP_012209285.1
GO:0008408 - 3'-5' exonuclease activity [Evidence IEA]; GO:0003677 - DNA binding [Evidence IEA]; GO:0003887 - DNA-directed DNA polymerase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF013046.2
COORDINATES: protein motif:HMM:NF013961.2
transglutaminase-like domain-containing protein
COORDINATES: protein motif:HMM:NF041118.1
GO:0103031 - L-Ala-D/L-Glu epimerase activity [Evidence IEA]
GO:0016998 - cell wall macromolecule catabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012209421.1
COORDINATES: similar to AA sequence:RefSeq:WP_012209579.1
GO:0004356 - glutamate-ammonia ligase activity [Evidence IEA]
GO:0006542 - glutamine biosynthetic process [Evidence IEA]
signal recognition particle sRNA small type
COORDINATES: nucleotide motif:Rfam:14.4:RF00169
COORDINATES: similar to AA sequence:RefSeq:WP_012209304.1
COORDINATES: similar to AA sequence:RefSeq:WP_012209305.1
COORDINATES: similar to AA sequence:RefSeq:WP_012209306.1
COORDINATES: nucleotide motif:Rfam:14.4:RF00558
ribosomal protein L20 leader region; Derived by automated computational analysis using gene prediction method: cmsearch.
COORDINATES: similar to AA sequence:RefSeq:WP_012208537.1
COORDINATES: protein motif:HMM:NF013771.2
COORDINATES: similar to AA sequence:RefSeq:WP_012208539.1
COORDINATES: similar to AA sequence:RefSeq:WP_012209259.1
GO:0004812 - aminoacyl-tRNA ligase activity [Evidence IEA]; GO:0005524 - ATP binding [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]; GO:0004832 - valine-tRNA ligase activity [Evidence IEA]
GO:0006438 - valyl-tRNA aminoacylation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012209258.1
folylpolyglutamate synthase/dihydrofolate synthase family protein
COORDINATES: protein motif:HMM:NF013495.2
Holliday junction ATP-dependent DNA helicase RuvA
COORDINATES: protein motif:HMM:NF010937.0
bifunctional UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase GlmU
COORDINATES: similar to AA sequence:RefSeq:WP_012209255.1
COORDINATES: protein motif:HMM:TIGR00731.1
GO:0008097 - 5S rRNA binding [Evidence IEA]; GO:0003735 - structural constituent of ribosome [Evidence IEA]
GO:0006950 - response to stress [Evidence IEA]; GO:0006412 - translation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012209253.1
COORDINATES: similar to AA sequence:RefSeq:WP_012208817.1
COORDINATES: similar to AA sequence:RefSeq:WP_012208818.1
sensor domain-containing diguanylate cyclase
COORDINATES: similar to AA sequence:RefSeq:WP_012209229.1
COORDINATES: similar to AA sequence:RefSeq:WP_014296037.1
COORDINATES: protein motif:HMM:NF014638.2
COORDINATES: protein motif:HMM:NF009793.2
GO:0044780 - bacterial-type flagellum assembly [Evidence IEA]; GO:0006417 - regulation of translation [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR02550.1
GO:0009424 - bacterial-type flagellum hook [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR02492.1
COORDINATES: protein motif:HMM:NF016985.2
GO:0044780 - bacterial-type flagellum assembly [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR03824.1
GO:0045892 - negative regulation of DNA-templated transcription [Evidence IEA]
flagellar biosynthesis anti-sigma factor FlgM
COORDINATES: protein motif:HMM:TIGR00472.1
GO:0009328 - phenylalanine-tRNA ligase complex [Evidence IEA]
GO:0004826 - phenylalanine-tRNA ligase activity [Evidence IEA]
GO:0006432 - phenylalanyl-tRNA aminoacylation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012208064.1
phenylalanine--tRNA ligase subunit alpha
COORDINATES: similar to AA sequence:RefSeq:WP_012208980.1
GO:0016832 - aldehyde-lyase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012209252.1
GO:0004540 - ribonuclease activity [Evidence IEA]
GO:0006401 - RNA catabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012208935.1
GO:0031522 - cell envelope Sec protein transport complex [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012208936.1
COORDINATES: similar to AA sequence:RefSeq:WP_012208937.1
COORDINATES: protein motif:HMM:TIGR00067.1
GO:0008881 - glutamate racemase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF015620.2
COORDINATES: protein motif:HMM:TIGR00647.1
GO:0043937 - regulation of sporulation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_003762439.1
GO:0140110 - transcription regulator activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012208012.1
GO:0003677 - DNA binding [Evidence IEA]; GO:0070063 - RNA polymerase binding [Evidence IEA]
GO:0032784 - regulation of DNA-templated transcription elongation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012208013.1
GO:0004824 - lysine-tRNA ligase activity [Evidence IEA]
GO:0006430 - lysyl-tRNA aminoacylation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012209619.1
COORDINATES: protein motif:HMM:NF018894.2
GO:0035438 - cyclic-di-GMP binding [Evidence IEA]
COORDINATES: protein motif:HMM:NF038011.1
GO:0016757 - glycosyltransferase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF028243.2
COORDINATES: protein motif:HMM:NF021477.2
COORDINATES: protein motif:HMM:TIGR02727.1
GO:0030272 - 5-formyltetrahydrofolate cyclo-ligase activity [Evidence IEA]
GO:0006730 - one-carbon metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012209439.1
nitrilase-related carbon-nitrogen hydrolase
COORDINATES: protein motif:HMM:TIGR01370.1
COORDINATES: protein motif:HMM:NF015239.2
GO:0017111 - ribonucleoside triphosphate phosphatase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012209014.1
COORDINATES: protein motif:HMM:NF015951.2
COORDINATES: protein motif:HMM:NF021351.2
COORDINATES: similar to AA sequence:RefSeq:WP_012209015.1
GO:0003855 - 3-dehydroquinate dehydratase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012208773.1
COORDINATES: protein motif:HMM:NF012478.2
COORDINATES: similar to AA sequence:RefSeq:WP_012208382.1
COORDINATES: similar to AA sequence:RefSeq:WP_012209504.1
GO:0003924 - GTPase activity [Evidence IEA]; GO:0005047 - signal recognition particle binding [Evidence IEA]
signal recognition particle-docking protein FtsY
COORDINATES: protein motif:HMM:NF021501.2
LysM peptidoglycan-binding domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_012209507.1
COORDINATES: similar to AA sequence:RefSeq:WP_012209508.1
GO:0016783 - sulfurtransferase activity [Evidence IEA]; GO:0016740 - transferase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_016290775.1
GO:0004595 - pantetheine-phosphate adenylyltransferase activity [Evidence IEA]
pantetheine-phosphate adenylyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_012209510.1
COORDINATES: protein motif:HMM:TIGR02075.1
GO:0033862 - UMP kinase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012209512.1
GO:0004634 - phosphopyruvate hydratase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012208941.1
COORDINATES: similar to AA sequence:RefSeq:WP_012208940.1
COORDINATES: similar to AA sequence:RefSeq:WP_012208939.1
COORDINATES: similar to AA sequence:RefSeq:WP_012208938.1
GO:0000902 - cell morphogenesis [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012208387.1
COORDINATES: similar to AA sequence:RefSeq:WP_012208388.1
cobalamin B12-binding domain-containing protein
COORDINATES: protein motif:HMM:TIGR00750.1
GO:0016772 - transferase activity, transferring phosphorus-containing groups [Evidence IEA]
GO:1903826 - L-arginine transmembrane transport [Evidence IEA]; GO:0015819 - lysine transport [Evidence IEA]; GO:0015822 - ornithine transport [Evidence IEA]
methylmalonyl Co-A mutase-associated GTPase MeaB
COORDINATES: similar to AA sequence:RefSeq:WP_012208390.1
COORDINATES: similar to AA sequence:RefSeq:WP_012208391.1
carboxyl transferase domain-containing protein
COORDINATES: protein motif:HMM:NF016187.2
GO:0008948 - oxaloacetate decarboxylase activity [Evidence IEA]; GO:0015081 - sodium ion transmembrane transporter activity [Evidence IEA]
GO:0036376 - sodium ion export across plasma membrane [Evidence IEA]
COORDINATES: protein motif:HMM:NF012584.2
acetyl-CoA carboxylase biotin carboxyl carrier protein subunit
COORDINATES: protein motif:HMM:NF024950.2
COORDINATES: similar to AA sequence:RefSeq:WP_012209417.1
GO:0004822 - isoleucine-tRNA ligase activity [Evidence IEA]
GO:0006428 - isoleucyl-tRNA aminoacylation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012209418.1
COORDINATES: protein motif:HMM:TIGR00229.1
COORDINATES: protein motif:HMM:NF014627.2
COORDINATES: protein motif:HMM:TIGR00342.1
GO:0009228 - thiamine biosynthetic process [Evidence IEA]; GO:0006400 - tRNA modification [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00530.1
lysophospholipid acyltransferase family protein
COORDINATES: protein motif:HMM:NF014618.2
COORDINATES: protein motif:HMM:NF012568.2
COORDINATES: protein motif:HMM:TIGR00544.1
GO:0008961 - phosphatidylglycerol-prolipoprotein diacylglyceryl transferase activity [Evidence IEA]
GO:0009249 - protein lipoylation [Evidence IEA]
prolipoprotein diacylglyceryl transferase
COORDINATES: similar to AA sequence:RefSeq:WP_012208238.1
COORDINATES: similar to AA sequence:RefSeq:WP_012207907.1
COORDINATES: protein motif:HMM:NF012348.2
GO:0006542 - glutamine biosynthetic process [Evidence IEA]; GO:0006807 - nitrogen compound metabolic process [Evidence IEA]
glutamine synthetase beta-grasp domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_012209586.1
GO:0008879 - glucose-1-phosphate thymidylyltransferase activity [Evidence IEA]
glucose-1-phosphate thymidylyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_012209584.1
COORDINATES: protein motif:HMM:TIGR03960.1
TIGR03960 family B12-binding radical SAM protein
COORDINATES: protein motif:HMM:NF024825.2
COORDINATES: similar to AA sequence:RefSeq:WP_012208117.1
branched-chain amino acid ABC transporter permease
COORDINATES: similar to AA sequence:RefSeq:WP_012208119.1
COORDINATES: similar to AA sequence:RefSeq:WP_012208120.1
COORDINATES: similar to AA sequence:RefSeq:WP_012209242.1
COORDINATES: similar to AA sequence:RefSeq:WP_012208797.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0003677 - DNA binding [Evidence IEA]; GO:0003678 - DNA helicase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012208798.1
GO:0008997 - ribonuclease R activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012207991.1
COORDINATES: similar to AA sequence:RefSeq:WP_012208550.1
COORDINATES: similar to AA sequence:RefSeq:WP_012208551.1
GO:0051539 - 4 iron, 4 sulfur cluster binding [Evidence IEA]; GO:0010181 - FMN binding [Evidence IEA]; GO:0051287 - NAD binding [Evidence IEA]; GO:0008137 - NADH dehydrogenase (ubiquinone) activity [Evidence IEA]
NADH-quinone oxidoreductase subunit NuoF
COORDINATES: similar to AA sequence:RefSeq:WP_012208552.1
(2Fe-2S) ferredoxin domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_012208553.1
NAD(P)H-dependent oxidoreductase subunit E
COORDINATES: similar to AA sequence:RefSeq:WP_012209431.1
COORDINATES: similar to AA sequence:RefSeq:WP_012208976.1
COORDINATES: similar to AA sequence:RefSeq:WP_012208977.1
GO:0016887 - ATP hydrolysis activity [Evidence IEA]; GO:0005515 - protein binding [Evidence IEA]
60 kDa chaperone family; promotes refolding of misfolded polypeptides especially under stressful conditions; forms two stacked rings of heptamers to form a barrel-shaped 14mer; ends can be capped by GroES; misfolded proteins enter the barrel where they are refolded when GroES binds; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: protein motif:HMM:NF005542.0
COORDINATES: similar to AA sequence:RefSeq:WP_016627896.1
flagellar hook-length control protein FliK
COORDINATES: protein motif:HMM:NF025229.2
flagellar hook capping FlgD N-terminal domain-containing protein
COORDINATES: protein motif:HMM:TIGR03506.1
flagellar hook-basal body complex protein
COORDINATES: similar to AA sequence:RefSeq:WP_012207965.1
COORDINATES: protein motif:HMM:NF015693.2
flagellar basal body-associated FliL family protein
COORDINATES: protein motif:HMM:TIGR01397.1
COORDINATES: protein motif:HMM:NF005995.1
GO:0009425 - bacterial-type flagellum basal body [Evidence IEA]; GO:0016020 - membrane [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012207973.1
COORDINATES: similar to AA sequence:RefSeq:WP_012207974.1
COORDINATES: protein motif:HMM:NF025679.2
COORDINATES: similar to AA sequence:RefSeq:WP_012209567.1
COORDINATES: similar to AA sequence:RefSeq:WP_012209568.1
COORDINATES: similar to AA sequence:RefSeq:WP_012209569.1
COORDINATES: similar to AA sequence:RefSeq:WP_012209570.1
COORDINATES: similar to AA sequence:RefSeq:WP_012209136.1
COORDINATES: similar to AA sequence:RefSeq:WP_014297375.1
COORDINATES: similar to AA sequence:RefSeq:WP_014296067.1
COORDINATES: protein motif:HMM:NF012804.2
class II aldolase/adducin family protein
COORDINATES: similar to AA sequence:RefSeq:WP_012208162.1
pyridoxal phosphate-dependent aminotransferase
COORDINATES: protein motif:HMM:NF000595.1
GO:0003723 - RNA binding [Evidence IEA]; GO:0004523 - RNA-DNA hybrid ribonuclease activity [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00444.1
GO:0003755 - peptidyl-prolyl cis-trans isomerase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012209465.1
COORDINATES: protein motif:HMM:TIGR03534.1
GO:0008757 - S-adenosylmethionine-dependent methyltransferase activity [Evidence IEA]
GO:0018364 - peptidyl-glutamine methylation [Evidence IEA]; GO:0006412 - translation [Evidence IEA]
peptide chain release factor N(5)-glutamine methyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_012209058.1
GO:0002161 - aminoacyl-tRNA editing activity [Evidence IEA]; GO:0004812 - aminoacyl-tRNA ligase activity [Evidence IEA]; GO:0005524 - ATP binding [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]; GO:0004827 - proline-tRNA ligase activity [Evidence IEA]
GO:0006433 - prolyl-tRNA aminoacylation [Evidence IEA]; GO:0006418 - tRNA aminoacylation for protein translation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012209055.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0004825 - methionine-tRNA ligase activity [Evidence IEA]; GO:0000049 - tRNA binding [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR01063.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0003677 - DNA binding [Evidence IEA]; GO:0003916 - DNA topoisomerase activity [Evidence IEA]; GO:0003918 - DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) activity [Evidence IEA]
GO:0006259 - DNA metabolic process [Evidence IEA]; GO:0006265 - DNA topological change [Evidence IEA]
COORDINATES: protein motif:HMM:NF014058.2
COORDINATES: protein motif:HMM:NF013855.2
helix-turn-helix domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_012209052.1
GO:0004751 - ribose-5-phosphate isomerase activity [Evidence IEA]
GO:0009052 - pentose-phosphate shunt, non-oxidative branch [Evidence IEA]
COORDINATES: protein motif:HMM:NF024245.2
helix-hairpin-helix domain-containing protein
COORDINATES: protein motif:HMM:NF014707.2
COORDINATES: protein motif:HMM:NF024970.2
COORDINATES: protein motif:HMM:NF015894.2
COORDINATES: similar to AA sequence:RefSeq:WP_012209045.1
GO:0050797 - thymidylate synthase (FAD) activity [Evidence IEA]
GO:0009265 - 2'-deoxyribonucleotide biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF024977.2
COORDINATES: protein motif:HMM:NF015803.2
GO:0019867 - outer membrane [Evidence IEA]
COORDINATES: protein motif:HMM:NF024628.2
COORDINATES: protein motif:HMM:NF014200.2
GO:0004185 - serine-type carboxypeptidase activity [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR01048.1
GO:0008836 - diaminopimelate decarboxylase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014297414.1
COORDINATES: similar to AA sequence:RefSeq:WP_014297413.1
COORDINATES: similar to AA sequence:RefSeq:WP_012209369.1
COORDINATES: similar to AA sequence:RefSeq:WP_012209370.1
COORDINATES: similar to AA sequence:RefSeq:WP_012209371.1
COORDINATES: similar to AA sequence:RefSeq:WP_012209372.1
COORDINATES: protein motif:HMM:NF012407.2
isocitrate/isopropylmalate family dehydrogenase
COORDINATES: protein motif:HMM:TIGR01027.1
GO:0004349 - glutamate 5-kinase activity [Evidence IEA]
GO:0006561 - proline biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF001221.0
GO:0004350 - glutamate-5-semialdehyde dehydrogenase activity [Evidence IEA]; GO:0016620 - oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00112.1
GO:0004735 - pyrroline-5-carboxylate reductase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012209495.1
3-isopropylmalate dehydratase small subunit
COORDINATES: similar to AA sequence:RefSeq:WP_012209494.1
3-isopropylmalate dehydratase large subunit
COORDINATES: protein motif:HMM:TIGR01800.1
COORDINATES: similar to AA sequence:RefSeq:WP_014297427.1
COORDINATES: protein motif:HMM:NF025124.2
COORDINATES: protein motif:HMM:NF016232.2
putative DNA binding domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_016293381.1
amino acid ABC transporter ATP-binding protein
COORDINATES: protein motif:HMM:NF024823.2
COORDINATES: similar to AA sequence:RefSeq:WP_012207887.1
GO:0005515 - protein binding [Evidence IEA]; GO:0004252 - serine-type endopeptidase activity [Evidence IEA]
GO:0006508 - proteolysis [Evidence IEA]; GO:0006950 - response to stress [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012209640.1
GO:0009381 - excinuclease ABC activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF016314.2
COORDINATES: protein motif:HMM:NF018076.2
50S ribosomal protein L11 methyltransferase
COORDINATES: protein motif:HMM:NF013827.2
COORDINATES: similar to AA sequence:RefSeq:WP_000541029.1
GO:0050660 - flavin adenine dinucleotide binding [Evidence IEA]
GO:0008033 - tRNA processing [Evidence IEA]; GO:0002098 - tRNA wobble uridine modification [Evidence IEA]
tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG
COORDINATES: similar to AA sequence:RefSeq:WP_012207990.1
GO:0016209 - antioxidant activity [Evidence IEA]; GO:0016491 - oxidoreductase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012208255.1
COORDINATES: similar to AA sequence:RefSeq:WP_012207917.1
GO:0051060 - pullulanase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012208691.1
GO:0016434 - rRNA (cytosine) methyltransferase activity [Evidence IEA]
16S rRNA (cytosine(1402)-N(4))-methyltransferase RsmH
COORDINATES: protein motif:HMM:NF024319.2
COORDINATES: protein motif:HMM:NF015602.2
COORDINATES: protein motif:HMM:NF018852.2
GO:0007155 - cell adhesion [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012208074.1
COORDINATES: similar to AA sequence:RefSeq:WP_012207886.1
GO:0008966 - phosphoglucosamine mutase activity [Evidence IEA]
GO:0009103 - lipopolysaccharide biosynthetic process [Evidence IEA]; GO:0009252 - peptidoglycan biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012209195.1
COORDINATES: protein motif:HMM:NF014881.2
COORDINATES: similar to AA sequence:RefSeq:WP_012209543.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0004329 - formate-tetrahydrofolate ligase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF013502.2
GO:0000156 - phosphorelay response regulator activity [Evidence IEA]; GO:0008984 - protein-glutamate methylesterase activity [Evidence IEA]
GO:0006935 - chemotaxis [Evidence IEA]; GO:0000160 - phosphorelay signal transduction system [Evidence IEA]
COORDINATES: protein motif:HMM:NF013867.2
COORDINATES: similar to AA sequence:RefSeq:WP_012209535.1
COORDINATES: protein motif:HMM:NF024170.2
COORDINATES: protein motif:HMM:NF028441.2
outer membrane lipoprotein-sorting protein
COORDINATES: similar to AA sequence:RefSeq:WP_012208338.1
COORDINATES: similar to AA sequence:RefSeq:WP_012209322.1
endonuclease III domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_012209321.1
COORDINATES: protein motif:HMM:NF021388.2
COORDINATES: protein motif:HMM:TIGR02289.1
COORDINATES: protein motif:HMM:TIGR00131.1
COORDINATES: protein motif:HMM:TIGR00209.1
COORDINATES: protein motif:HMM:NF014156.2
COORDINATES: similar to AA sequence:RefSeq:WP_012209706.1
COORDINATES: similar to AA sequence:RefSeq:WP_012209707.1
COORDINATES: similar to AA sequence:RefSeq:WP_012209708.1
COORDINATES: similar to AA sequence:RefSeq:WP_012208659.1
COORDINATES: protein motif:HMM:NF015549.2
COORDINATES: protein motif:HMM:NF017273.2
COORDINATES: protein motif:HMM:NF024770.2
COORDINATES: protein motif:HMM:NF015971.2
COORDINATES: protein motif:HMM:NF017760.2
COORDINATES: similar to AA sequence:RefSeq:WP_012208726.1
COORDINATES: protein motif:HMM:NF021378.2
COORDINATES: protein motif:HMM:NF021485.2
COORDINATES: protein motif:HMM:TIGR03916.1
putative DNA modification/repair radical SAM protein
COORDINATES: protein motif:HMM:TIGR03915.1
TIGR03915 family putative DNA repair protein
COORDINATES: similar to AA sequence:RefSeq:WP_012208105.1
GO:0004106 - chorismate mutase activity [Evidence IEA]
GO:0009073 - aromatic amino acid family biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_008602464.1
GO:0051536 - iron-sulfur cluster binding [Evidence IEA]; GO:0016661 - oxidoreductase activity, acting on other nitrogenous compounds as donors [Evidence IEA]
COORDINATES: protein motif:HMM:NF024135.2
COORDINATES: similar to AA sequence:RefSeq:WP_014296972.1
COORDINATES: similar to AA sequence:RefSeq:WP_014297534.1
COORDINATES: similar to AA sequence:RefSeq:WP_014297532.1
COORDINATES: similar to AA sequence:RefSeq:WP_012209296.1
COORDINATES: protein motif:HMM:NF041101.1
COORDINATES: similar to AA sequence:RefSeq:WP_012208994.1
YifB family Mg chelatase-like AAA ATPase
metal ABC transporter substrate-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_012208815.1
COORDINATES: similar to AA sequence:RefSeq:WP_012208813.1
COORDINATES: similar to AA sequence:RefSeq:WP_012208812.1
COORDINATES: protein motif:HMM:NF013694.2
magnesium transporter CorA family protein
COORDINATES: similar to AA sequence:RefSeq:WP_012209302.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0004797 - thymidine kinase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF015714.2
COORDINATES: similar to AA sequence:RefSeq:WP_012207994.1
2,3-bisphosphoglycerate-independent phosphoglycerate mutase
COORDINATES: protein motif:HMM:NF015949.2
COORDINATES: protein motif:HMM:NF013736.2