Xanthomonas perforans strain GEV872 plasmid pGEV872.3, complete sequence.
type: Entry
definition: Xanthomonas perforans strain GEV872 plasmid pGEV872.3, complete sequence.
sequence version: NZ_CP116308.1
sequence date: 2023-04-07
sequence: sequence
division: CON
label: NZ_CP116308.1
type: RefSeq
SIO_000068: refseq
dblink: PRJNA224116
dblink: SAMN32758707
keyword: RefSeq
source: Xanthomonas perforans (Xanthomonas euvesicatoria pv. perforans)
organism: Xanthomonas perforans
taxonomy: Bacteria; Pseudomonadota; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.
reference: 1
reference: 2
comment: REFSEQ INFORMATION: The reference sequence is identical to\nCP116308.1.\nThe annotation was added by the NCBI Prokaryotic Genome Annotation\nPipeline (PGAP). Information about PGAP can be found here:\nhttps://www.ncbi.nlm.nih.gov/genome/annotation_prok/\n\n##Genome-Assembly-Data-START##\nAssembly Date :: 08-AUG-2021\nAssembly Method :: Canu v. 2.1\nAssembly Name :: UFL_GEV872_pb1.1\nGenome Representation :: Full\nExpected Final Version :: Yes\nGenome Coverage :: 1100x\nSequencing Technology :: PacBio Sequel; Illumina MiSeq\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI RefSeq\nAnnotation Date :: 01/27/2023 07:36:58\nAnnotation Pipeline :: NCBI Prokaryotic Genome\n Annotation Pipeline (PGAP)\nAnnotation Method :: Best-placed reference protein\n set; GeneMarkS-2+\nAnnotation Software revision :: 6.4\nFeatures Annotated :: Gene; CDS; rRNA; tRNA; ncRNA\nGenes (total) :: 4,515\nCDSs (total) :: 4,419\nGenes (coding) :: 4,330\nCDSs (with protein) :: 4,330\nGenes (RNA) :: 96\nrRNAs :: 2, 2, 2 (5S, 16S, 23S)\ncomplete rRNAs :: 2, 2, 2 (5S, 16S, 23S)\ntRNAs :: 55\nncRNAs :: 35\nPseudo Genes (total) :: 89\nCDSs (without protein) :: 89\nPseudo Genes (ambiguous residues) :: 0 of 89\nPseudo Genes (frameshifted) :: 45 of 89\nPseudo Genes (incomplete) :: 47 of 89\nPseudo Genes (internal stop) :: 18 of 89\nPseudo Genes (multiple problems) :: 17 of 89\n##Genome-Annotation-Data-END##\nCOMPLETENESS: full length.

sequence
subclass of: SO_0000155
sequence length: 18815
topology: circular
so has quality: SO_0000988
location: 1..18815
location: region:1-18815:1
RO_0002162: 442694

NZ_CP116308
type: RefSeq
SIO_000068: refseq

PRJNA224116
type: BioProject
SIO_000068: bioproject

SAMN32758707
type: BioSample
SIO_000068: biosample

1
title: Estimating rates of bacterial mutation during epidemic
author: Sharma, A.
author: Timilsina, S.
author: Abrahamian, P.
author: Minsavage, G.V.
author: Jones, J.B.
author: Vallad, G.E.
author: Goss, E.M.
journal: Unpublished

2
title: Direct Submission
author: Sharma, A.
author: Timilsina, S.
author: Abrahamian, P.
author: Minsavage, G.V.
author: Jones, J.B.
author: Vallad, G.E.
author: Goss, E.M.
journal: Submitted (16-JAN-2023) Plant Pathology, University of Florida, 2550 Hull Rd, Gainesville, Fl 32611, USA

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:18815:1
position: 18815
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-18815:1:source
so part of: sequence
organism: Xanthomonas perforans
mol type: genomic DNA
strain: GEV872
host: Tomato
plasmid: pGEV872.3
country: USA: Immokalee, FL
collection date: 2012-08-24

442694
type: Taxonomy
SIO_000068: taxonomy

PJW04_RS22450
type: Gene
subclass of: SO_0000704
RO_0002162: 442694
locus tag: PJW04_RS22450
old locus tag: PJW04_22450
so part of: sequence
location: 1..357
location: region:1-357:1
so has part: feature:1-357:1:exon
subclass of: SO_0000010

79909966
type: Gene
SIO_000068: ncbigene

position:357:1
position: 357
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1-357:1:exon

PJW04_RS22450
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 442694
locus tag: PJW04_RS22450
old locus tag: PJW04_22450
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017173683.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MAWDVNELARRIDPRRSGGVVVYGLIIAVAVYVATSHTWRTGRAEMQTQADAQAQQLADAQAAKLETARLAAQSVVDLHQHCQTYPADYGCENLHGKSLDEVLEMQRKQQAEAINSVR
SIO_010081: PJW04_RS22450
subclass of: SO_0000673
so part of: PJW04_RS22450
location: 1..357
location: region:1-357:1
so has part: feature:1-357:1:exon

WP_040150161.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1-357:1:exon

PJW04_RS22455
type: Gene
subclass of: SO_0000704
RO_0002162: 442694
locus tag: PJW04_RS22455
old locus tag: PJW04_22455
so part of: sequence
location: 467..2974
location: region:467-2974:1
so has part: feature:467-2974:1:exon
subclass of: SO_0000010

79909967
type: Gene
SIO_000068: ncbigene

position:467:1
position: 467
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2974:1
position: 2974
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:467-2974:1:exon

PJW04_RS22455
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 442694
locus tag: PJW04_RS22455
old locus tag: PJW04_22455
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017172800.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DotA/TraY family protein
translation: MPFSPCPDTGEPCTDQSVAILREIFGPVIDQLAAGGDPDTVSATANILASMFSVFNSGVLVVGTLIVSYVAVVGVINTANDGQAMGRNWSSLWTPVRIVAGGASLLPTASGFSFIQLFGLMVALWGVGLANAVYDKGVTLGLLKPEGLIATVNDPGSQYGLRQFARQYVAASYCANAANSIFAGFGGNTPQVRANSEPDRVFNAGGRREYVFEIKDRNRTTNLAGGAPICGTVKVAEYHAQPRDDATAQATEQVRAQAMEQKKRAAVEMMGAIDRWVITWPDDVSKPGWDSVSSAQFNAIVSEAEQKVVAGLESSIASRQGAMASGLSAYVASLTNEGWATAGGWLQKVGLVRTQLSATFSESVGSVTEPSLTGLPNSPASDMLANSVGLVADITRKAESHDDYTSGDIKPDDLTSAIPTDPMAAVNVGQIQADMDAKMSSWVNRRMEDIVDIAVGADGSDGTGGWCGTAGLIGGSLNRMKCVGDYFSATRGAAQTMKTTLLTAVTVVRVAAGVIGGTKVLGNGFEADKVVDPIWDWIKEVIIPPLAELEMRLETLAFYFGVFLPSLPYALFILVICGWVLSVIQTLLAAPLWAVMHMTPDKTFIGSQRQGYLLLMSLFARPVLAVIGLFAGILISDPLVNFASKGFFAMRGAIVTSTGTVGAISEFFTFTWWMYAFALMLLPIFYMCFGLPQVLPDKVLQWIGGGVADLGETSALGEMRTGLARAHAYGRVPGKDKDKQKKLGGGGGNRPLPGSGPRGDGGGSGGGGGGNQPVSGGGQGVTPRLPPPSSPGGRGQGDAGIGPAGPAPRPQGNSGLRRLAPPLSANEQGATPGKE
SIO_010081: PJW04_RS22455
subclass of: SO_0000673
so part of: PJW04_RS22455
location: 467..2974
location: region:467-2974:1
so has part: feature:467-2974:1:exon

WP_040279208.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:467-2974:1:exon

PJW04_RS22460
type: Gene
subclass of: SO_0000704
RO_0002162: 442694
locus tag: PJW04_RS22460
old locus tag: PJW04_22460
so part of: sequence
location: 2978..3394
location: region:2978-3394:1
so has part: feature:2978-3394:1:exon
subclass of: SO_0000010

79909968
type: Gene
SIO_000068: ncbigene

position:2978:1
position: 2978
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3394:1
position: 3394
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2978-3394:1:exon

PJW04_RS22460
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 442694
locus tag: PJW04_RS22460
old locus tag: PJW04_22460
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MSHLDYERGLYEGVAAQQHQYAEGRRDGWNEAIEEMTPRFQALERERDDLAYALKAVAATGAALMEAMRDAPPHVRIAAVNAYNDRCDDLIGSVLRCPPHLDPTVQEREPAVARWIPDISDQLVNSGQAIFPDDDPSP
SIO_010081: PJW04_RS22460
subclass of: SO_0000673
so part of: PJW04_RS22460
location: 2978..3394
location: region:2978-3394:1
so has part: feature:2978-3394:1:exon

WP_052455480.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2978-3394:1:exon

PJW04_RS22465
type: Gene
subclass of: SO_0000704
RO_0002162: 442694
locus tag: PJW04_RS22465
old locus tag: PJW04_22465
so part of: sequence
location: 3410..3757
location: region:3410-3757:1
so has part: feature:3410-3757:1:exon
subclass of: SO_0000010

79909969
type: Gene
SIO_000068: ncbigene

position:3410:1
position: 3410
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3757:1
position: 3757
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3410-3757:1:exon

PJW04_RS22465
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 442694
locus tag: PJW04_RS22465
old locus tag: PJW04_22465
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MSALNESERLAADTLTIVRHLFSGPHSYRNVGIVAVIWIVLLSLSAALIYFGVTHSLEAMRPVMVVPAVEGNPAPVLSALVLVPLIVLGACVLFVAACCLSYSLLARFGRATPSP
SIO_010081: PJW04_RS22465
subclass of: SO_0000673
so part of: PJW04_RS22465
location: 3410..3757
location: region:3410-3757:1
so has part: feature:3410-3757:1:exon

WP_040245474.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3410-3757:1:exon

PJW04_RS22470
type: Gene
subclass of: SO_0000704
RO_0002162: 442694
locus tag: PJW04_RS22470
old locus tag: PJW04_22470
so part of: sequence
location: 3788..4294
location: region:3788-4294:1
so has part: feature:3788-4294:1:exon
subclass of: SO_0000010

79909970
type: Gene
SIO_000068: ncbigene

position:3788:1
position: 3788
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4294:1
position: 4294
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3788-4294:1:exon

PJW04_RS22470
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 442694
locus tag: PJW04_RS22470
old locus tag: PJW04_22470
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017154709.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MSYPLQPVPADVLAVLRLRCRLSARLKRGLARGLALPLALLAAVSSAHAAEPTLADALECRLHASKAESVLARYGVTVDGPAVQPGVTVYGIPAAQLEATREAGALHLYYVIRAADAQRFIDAAQMEPIGPAFVRLLLDDRNGLQAMSPAAIRQHGGPAAPILCEMRA
SIO_010081: PJW04_RS22470
subclass of: SO_0000673
so part of: PJW04_RS22470
location: 3788..4294
location: region:3788-4294:1
so has part: feature:3788-4294:1:exon

WP_040150140.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3788-4294:1:exon

PJW04_RS22475
type: Gene
subclass of: SO_0000704
RO_0002162: 442694
locus tag: PJW04_RS22475
old locus tag: PJW04_22475
so part of: sequence
location: 4291..4746
location: region:4291-4746:1
so has part: feature:4291-4746:1:exon
subclass of: SO_0000010

79909971
type: Gene
SIO_000068: ncbigene

position:4291:1
position: 4291
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4746:1
position: 4746
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4291-4746:1:exon

PJW04_RS22475
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 442694
locus tag: PJW04_RS22475
old locus tag: PJW04_22475
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017154710.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MTKIIPPALLAVLLAAPAAAMAAEPASLSEVLECNVAADKALVALERAGIPITGQSVPVSNVAAYGVPVKRIDHISKNDEFLQVTFVIDRSGHGKLVAAAGLKAWDDEFGAGFRSAMLGGKNELNVTHPDDPNAEDNEVLGFCMMSFRGAL
SIO_010081: PJW04_RS22475
subclass of: SO_0000673
so part of: PJW04_RS22475
location: 4291..4746
location: region:4291-4746:1
so has part: feature:4291-4746:1:exon

WP_040150138.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4291-4746:1:exon

PJW04_RS22480
type: Gene
subclass of: SO_0000704
RO_0002162: 442694
locus tag: PJW04_RS22480
old locus tag: PJW04_22480
so part of: sequence
location: 4743..5882
location: region:4743-5882:1
so has part: feature:4743-5882:1:exon
subclass of: SO_0000010

79909972
type: Gene
SIO_000068: ncbigene

position:4743:1
position: 4743
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5882:1
position: 5882
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4743-5882:1:exon

PJW04_RS22480
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 442694
locus tag: PJW04_RS22480
old locus tag: PJW04_22480
EC number: 3.4.-.-
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017173681.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: M23 family metallopeptidase
translation: MNAKAAFLTPLLAVASTAAPAWAQSCMVDVTDHELVTERFGINADFRKGRTHDGFDFRAPLGSPLYAGADGVVTTRDTWRGAGNVLVIRRPNGQTMTYYHMSSFAPDAAVGKEVKAGQLIGYAGGTSAKTTGGTAYASYDPHLHFIYAVPDAGQQRITNFSQHASRLRSVNPGQLPRDFTGNARPQAVGVGYKTDPAPFFCKAYPFKDKSLDAILGADTKEQHQIVFGNVPPGGSPPDGAIAPAEAAAGNMQLLLAQQAGQPVEDYLSDADSFGALPGPPVGAYETLSVNEMLATEAARRFQSADWNNELTRVSERALWVDFVRAQGVSNYLQEAIYDKKQSVEALLAVLTSQRLEHVRKRTAAAQERAVRGEAVRSVE
SIO_010081: PJW04_RS22480
subclass of: SO_0000673
so part of: PJW04_RS22480
location: 4743..5882
location: region:4743-5882:1
so has part: feature:4743-5882:1:exon

WP_046933398.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4743-5882:1:exon

PJW04_RS22485
type: Gene
subclass of: SO_0000704
RO_0002162: 442694
locus tag: PJW04_RS22485
old locus tag: PJW04_22485
so part of: sequence
location: complement(5904..6467)
location: region:5904-6467:-1
so has part: feature:5904-6467:-1:exon
subclass of: SO_0000010

79909973
type: Gene
SIO_000068: ncbigene

position:5904:-1
position: 5904
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6467:-1
position: 6467
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5904-6467:-1:exon

PJW04_RS22485
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 442694
locus tag: PJW04_RS22485
old locus tag: PJW04_22485
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MSNSDRARELAALKVAARAAKDCKVYVPRNLTMFRIVCCPAAPAPGAAGQQTMTAELDALRERITADGRHWRALIGFATLIRNRLAASRLSRREYADDFAFLRIELAAGIGVGHAALIEYGVRSGRERHTVGVVTGRWEDAELHDVRAWEEGQPCQIAEAWQWIERTELDAMPELREAQRGRAHVLN
SIO_010081: PJW04_RS22485
subclass of: SO_0000673
so part of: PJW04_RS22485
location: complement(5904..6467)
location: region:5904-6467:-1
so has part: feature:5904-6467:-1:exon

WP_228996806.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:5904-6467:-1:exon

PJW04_RS22490
type: Gene
subclass of: SO_0000704
RO_0002162: 442694
locus tag: PJW04_RS22490
old locus tag: PJW04_22490
so part of: sequence
location: complement(6496..6741)
location: region:6496-6741:-1
so has part: feature:6496-6741:-1:exon
subclass of: SO_0000010

79909974
type: Gene
SIO_000068: ncbigene

position:6496:-1
position: 6496
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6741:-1
position: 6741
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6496-6741:-1:exon

PJW04_RS22490
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 442694
locus tag: PJW04_RS22490
old locus tag: PJW04_22490
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017172840.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MPVPDALDALGLYWKRDPDFRPLKDKATVRVNVSLGGGVVELLATGPKWYDTRAEKGGGGAIDLAMHLLRLDFVSAVKRFE
SIO_010081: PJW04_RS22490
subclass of: SO_0000673
so part of: PJW04_RS22490
location: complement(6496..6741)
location: region:6496-6741:-1
so has part: feature:6496-6741:-1:exon

WP_046932153.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:6496-6741:-1:exon

PJW04_RS22495
type: Gene
subclass of: SO_0000704
RO_0002162: 442694
locus tag: PJW04_RS22495
old locus tag: PJW04_22495
so part of: sequence
location: complement(7025..8452)
location: region:7025-8452:-1
so has part: feature:7025-8452:-1:exon
subclass of: SO_0000010

79909975
type: Gene
SIO_000068: ncbigene

position:7025:-1
position: 7025
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8452:-1
position: 8452
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7025-8452:-1:exon

PJW04_RS22495
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 442694
locus tag: PJW04_RS22495
old locus tag: PJW04_22495
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017172839.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MDTRSSAQLALFDPDDEARSYHDAARWGYFSLLVGQGSQRKQDSYKLAMMPTVLSMVDPTRDTWLSQAEFDRGCRRIVHLLRIGLLFADLDTYRLPWAQGRTPEQLAAAVLHHCADEGLPRPSLLVYSGRGIQAKWLLDGTIPRQALPRWNACQRYLIDRLAPLGADPVAKDASRVLRLVNTVNTKSGNVCRVVHVAHGPDGEPVRYGFEYMAEALLPVARWDIEQQRRDRAERRQLKLMPGGKSDNLRGFSGRQLAWDRLEDLRTLAKLRGGVGQGERMQHLFWRLNFLLLSGATNSSLMYHEAAALAGELDPTWNYRSKELMTLYGKAKAFESGEKVTFGGRQFPPLYTPKNDSLISLFKITDDEQRQLRTLISRDMAAERRRERDRKRDEARRRASGAVDRETYESRSAARLRPWEALGMSRRSWYRAGKPYPGDSGTGSSPITAGGVGAVAGGTSPSPITNGEASAPGGAG
SIO_010081: PJW04_RS22495
subclass of: SO_0000673
so part of: PJW04_RS22495
location: complement(7025..8452)
location: region:7025-8452:-1
so has part: feature:7025-8452:-1:exon

WP_046932154.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:7025-8452:-1:exon

PJW04_RS22500
type: Gene
subclass of: SO_0000704
RO_0002162: 442694
locus tag: PJW04_RS22500
old locus tag: PJW04_22500
so part of: sequence
location: complement(8652..8987)
location: region:8652-8987:-1
so has part: feature:8652-8987:-1:exon
subclass of: SO_0000010

79909976
type: Gene
SIO_000068: ncbigene

position:8652:-1
position: 8652
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8987:-1
position: 8987
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8652-8987:-1:exon

PJW04_RS22500
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 442694
locus tag: PJW04_RS22500
old locus tag: PJW04_22500
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017154716.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ParC family partition-associated protein
translation: MIEPDEFADLESATVVDHRVYRELAAAGSVQGACVRSAGEDKGLVILLRVGNQNRVLGRRAGGPRYFQSFDSAAHVLDQAGIVDWVATSRGWTPKTAVKYRQDKEARAAEE
SIO_010081: PJW04_RS22500
subclass of: SO_0000673
so part of: PJW04_RS22500
location: complement(8652..8987)
location: region:8652-8987:-1
so has part: feature:8652-8987:-1:exon

WP_040279228.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:8652-8987:-1:exon

PJW04_RS22505
type: Gene
subclass of: SO_0000704
RO_0002162: 442694
locus tag: PJW04_RS22505
old locus tag: PJW04_22505
so part of: sequence
location: complement(9093..9317)
location: region:9093-9317:-1
so has part: feature:9093-9317:-1:exon
subclass of: SO_0000010

79909977
type: Gene
SIO_000068: ncbigene

position:9093:-1
position: 9093
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9317:-1
position: 9317
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9093-9317:-1:exon

PJW04_RS22505
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 442694
locus tag: PJW04_RS22505
old locus tag: PJW04_22505
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017154717.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: plasmid partition protein ParG
translation: MTTKPTLGLAAGRPSASPKNKAATLASLADTKATKRVNFNLTEDEHLKLKVAAAKQGKSITQLLTDYVRSLPDE
SIO_010081: PJW04_RS22505
subclass of: SO_0000673
so part of: PJW04_RS22505
location: complement(9093..9317)
location: region:9093-9317:-1
so has part: feature:9093-9317:-1:exon

WP_040279226.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:9093-9317:-1:exon

PJW04_RS22510
type: Gene
subclass of: SO_0000704
RO_0002162: 442694
locus tag: PJW04_RS22510
old locus tag: PJW04_22510
so part of: sequence
location: complement(9338..9967)
location: region:9338-9967:-1
so has part: feature:9338-9967:-1:exon
subclass of: SO_0000010

79909978
type: Gene
SIO_000068: ncbigene

position:9338:-1
position: 9338
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9967:-1
position: 9967
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9338-9967:-1:exon

PJW04_RS22510
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 442694
locus tag: PJW04_RS22510
old locus tag: PJW04_22510
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017154806.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ParA family partition ATPase
translation: MKVIAVLNQKGGSGKTTIATHLARALQLDGEDVLLVDSDPQGSARDWGAAKEDNPVTVVGIDRPTIDRDVKKVASKDFVVIDGAPQAADLAVSAIKAADVVLIPVQPSPYDIWAASDLVDLVKQRIELTDGVLKVAFVVSRAIKGTRIGSEVTTALQGYSLPVLDSRITQRVIYPGTASSGSTVLDDEPDGDAAAEIRALLAEVRAKLI
SIO_010081: PJW04_RS22510
subclass of: SO_0000673
so part of: PJW04_RS22510
location: complement(9338..9967)
location: region:9338-9967:-1
so has part: feature:9338-9967:-1:exon

WP_017154718.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:9338-9967:-1:exon

PJW04_RS22515
type: Gene
subclass of: SO_0000704
RO_0002162: 442694
locus tag: PJW04_RS22515
old locus tag: PJW04_22515
so part of: sequence
location: complement(10045..10602)
location: region:10045-10602:-1
so has part: feature:10045-10602:-1:exon
subclass of: SO_0000010

79909979
type: Gene
SIO_000068: ncbigene

position:10045:-1
position: 10045
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:10602:-1
position: 10602
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:10045-10602:-1:exon

PJW04_RS22515
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 442694
locus tag: PJW04_RS22515
old locus tag: PJW04_22515
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017166843.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: recombinase family protein
translation: MLIGYARVSTGDQDLRQQRNELHAAGCTRIFAEKVTGTHVKRPELTRMLDHLRTGDVVTVTRLDRLARSTRDLLDIAEQLQAKDAGLRSLAEPWADTTSPAGRMVLTIFGGIAEFERSLIVERTRSGREAAKRRGVRFGPPPTLTAAQLTHARELIEREERPMKEVADLLGVHRTTLWRALNKNE
SIO_010081: PJW04_RS22515
subclass of: SO_0000673
so part of: PJW04_RS22515
location: complement(10045..10602)
location: region:10045-10602:-1
so has part: feature:10045-10602:-1:exon

WP_017154719.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:10045-10602:-1:exon

PJW04_RS22520
type: Gene
subclass of: SO_0000704
RO_0002162: 442694
locus tag: PJW04_RS22520
old locus tag: PJW04_22520
so part of: sequence
location: complement(10605..10742)
location: region:10605-10742:-1
so has part: feature:10605-10742:-1:exon
subclass of: SO_0000010

79909980
type: Gene
SIO_000068: ncbigene

position:10605:-1
position: 10605
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:10742:-1
position: 10742
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:10605-10742:-1:exon

PJW04_RS22520
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 442694
locus tag: PJW04_RS22520
old locus tag: PJW04_22520
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017154720.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MPYLHVYRAPYAISCERRPGSWEANRSFEFATYDKRGETYADQWF
SIO_010081: PJW04_RS22520
subclass of: SO_0000673
so part of: PJW04_RS22520
location: complement(10605..10742)
location: region:10605-10742:-1
so has part: feature:10605-10742:-1:exon

WP_017154720.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:10605-10742:-1:exon

PJW04_RS22525
type: Gene
subclass of: SO_0000704
RO_0002162: 442694
locus tag: PJW04_RS22525
old locus tag: PJW04_22525
so part of: sequence
location: complement(10771..10980)
location: region:10771-10980:-1
so has part: feature:10771-10980:-1:exon
subclass of: SO_0000010

79909981
type: Gene
SIO_000068: ncbigene

position:10771:-1
position: 10771
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:10980:-1
position: 10980
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:10771-10980:-1:exon

PJW04_RS22525
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 442694
locus tag: PJW04_RS22525
old locus tag: PJW04_22525
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017154721.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MTTVTLPVPFEFERFCQRARLAPEHVLTAFMSDLTEPPRPQGREGANECHHAHKWFAAVTRPAVARVTG
SIO_010081: PJW04_RS22525
subclass of: SO_0000673
so part of: PJW04_RS22525
location: complement(10771..10980)
location: region:10771-10980:-1
so has part: feature:10771-10980:-1:exon

WP_228996802.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:10771-10980:-1:exon

PJW04_RS22530
type: Gene
subclass of: SO_0000704
RO_0002162: 442694
locus tag: PJW04_RS22530
old locus tag: PJW04_22530
so part of: sequence
location: 11251..11541
location: region:11251-11541:1
so has part: feature:11251-11541:1:exon
subclass of: SO_0000010

79909982
type: Gene
SIO_000068: ncbigene

position:11251:1
position: 11251
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:11541:1
position: 11541
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11251-11541:1:exon

PJW04_RS22530
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 442694
locus tag: PJW04_RS22530
old locus tag: PJW04_22530
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014508712.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF1778 domain-containing protein
translation: MPTMSTAPSKRETLNIRIKPEERSLIDRAAKARGKNRTDFVLEAARSAAEEALLDQTIISASPDAYAAFLARLDMPPQPNERLRKTMQTPAPWEKA
SIO_010081: PJW04_RS22530
subclass of: SO_0000673
so part of: PJW04_RS22530
location: 11251..11541
location: region:11251-11541:1
so has part: feature:11251-11541:1:exon

WP_017154722.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:11251-11541:1:exon

PJW04_RS22535
type: Gene
subclass of: SO_0000704
RO_0002162: 442694
locus tag: PJW04_RS22535
old locus tag: PJW04_22535
so part of: sequence
location: 11538..12047
location: region:11538-12047:1
so has part: feature:11538-12047:1:exon
subclass of: SO_0000010

79909983
type: Gene
SIO_000068: ncbigene

position:11538:1
position: 11538
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:12047:1
position: 12047
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11538-12047:1:exon

PJW04_RS22535
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 442694
locus tag: PJW04_RS22535
old locus tag: PJW04_22535
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017154723.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: GNAT family N-acetyltransferase
translation: MKVSAPEPLAAHHDIEAFDSGVDSLDQWLKRRALKNQATGASRTFVACDDGRVVAYYALASSGVTVDAAPGRFRRNMPDPIPVVVLGRLAVDQSQQGRGLGRALVKDAGQRIVQAADTIGIRGVLVHALSADAKAFYERIGFEPSPLDPMMLLVTLDDLKASLEPQARR
SIO_010081: PJW04_RS22535
subclass of: SO_0000673
so part of: PJW04_RS22535
location: 11538..12047
location: region:11538-12047:1
so has part: feature:11538-12047:1:exon

WP_033836093.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:11538-12047:1:exon

PJW04_RS22540
type: Gene
subclass of: SO_0000704
RO_0002162: 442694
locus tag: PJW04_RS22540
old locus tag: PJW04_22540
so part of: sequence
location: 12044..12310
location: region:12044-12310:1
so has part: feature:12044-12310:1:exon
subclass of: SO_0000010

79909984
type: Gene
SIO_000068: ncbigene

position:12044:1
position: 12044
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:12310:1
position: 12310
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:12044-12310:1:exon

PJW04_RS22540
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 442694
locus tag: PJW04_RS22540
old locus tag: PJW04_22540
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017173688.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MTRPRHVLDAVLDGVADPAAMPEPECKRLDPVRPGEPPVRRLTDAELVALREEMREAGQRMKARLRAREAARNAGTQRFIASADRLPS
SIO_010081: PJW04_RS22540
subclass of: SO_0000673
so part of: PJW04_RS22540
location: 12044..12310
location: region:12044-12310:1
so has part: feature:12044-12310:1:exon

WP_033836092.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:12044-12310:1:exon

PJW04_RS22545
type: Gene
subclass of: SO_0000704
RO_0002162: 442694
locus tag: PJW04_RS22545
old locus tag: PJW04_22545
so part of: sequence
location: complement(12605..13093)
location: region:12605-13093:-1
so has part: feature:12605-13093:-1:exon
subclass of: SO_0000010

79909985
type: Gene
SIO_000068: ncbigene

position:12605:-1
position: 12605
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:13093:-1
position: 13093
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:12605-13093:-1:exon

PJW04_RS22545
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 442694
locus tag: PJW04_RS22545
old locus tag: PJW04_22545
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017154725.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MLDHPALPVFGREVLAAIFRDCDGPGLFGVSDELTRELGDASRYIVALSGRPDAGPAAVWIDFGDVDAAGLRQQRGEFRARWIPVDGKIVGEVAASLDGVPVADFGAFARAFAPYIYADLPGVSGPVVQAHHTLMNADARGVTAAMAARWQSWRGDDSSKPH
SIO_010081: PJW04_RS22545
subclass of: SO_0000673
so part of: PJW04_RS22545
location: complement(12605..13093)
location: region:12605-13093:-1
so has part: feature:12605-13093:-1:exon

WP_228996803.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:12605-13093:-1:exon

PJW04_RS22550
type: Gene
subclass of: SO_0000704
RO_0002162: 442694
locus tag: PJW04_RS22550
old locus tag: PJW04_22550
so part of: sequence
location: complement(13096..13356)
location: region:13096-13356:-1
so has part: feature:13096-13356:-1:exon
subclass of: SO_0000010

79909986
type: Gene
SIO_000068: ncbigene

position:13096:-1
position: 13096
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:13356:-1
position: 13356
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:13096-13356:-1:exon

PJW04_RS22550
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 442694
locus tag: PJW04_RS22550
old locus tag: PJW04_22550
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MNTDHEMVTLADYPVLAEIAAGERIAEARATLDGEQAPFATFAAVLFDYLRLPVMAGPVTARHAEIDRHRAMTAALKAPIQSARRH
SIO_010081: PJW04_RS22550
subclass of: SO_0000673
so part of: PJW04_RS22550
location: complement(13096..13356)
location: region:13096-13356:-1
so has part: feature:13096-13356:-1:exon

WP_228996804.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:13096-13356:-1:exon

PJW04_RS22555
type: Gene
subclass of: SO_0000704
RO_0002162: 442694
locus tag: PJW04_RS22555
old locus tag: PJW04_22555
so part of: sequence
location: complement(13353..15791)
location: region:13353-15791:-1
so has part: feature:13353-15791:-1:exon
subclass of: SO_0000010

79909987
type: Gene
SIO_000068: ncbigene

position:13353:-1
position: 13353
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:15791:-1
position: 15791
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:13353-15791:-1:exon

PJW04_RS22555
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 442694
locus tag: PJW04_RS22555
old locus tag: PJW04_22555
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017154701.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: TraI/MobA(P) family conjugative relaxase
translation: MIIELFGKRNDGGTSFHSAVSYIASLRDQIDPETGEVIDRGMVTTFTNCHSLETAAIEMWGTSALSARIKDPVFAGVLSWQSGENPTDEQMHEAGLLHLKNQGMEGHQYVMSVHRDTDNVHIHFVANRVHPETGRAAGLNHSYMTAVRSAREIEIAQGWQHVEQGPFMVREHDGEKVVDYRHASAKERIAEREAKRGNKPDQARKMEAFSGKESLASYVQGEPKNDALAALDKGGDWQALHKALGVHGLAIKPKGPGFAIHSTRDPAAVPVKASTMAQALGGARLKSKLGEYQEPTPEIARTEPRREYVKERPKRDPKMREEQRDARAFERAKLRSRYDSYRTDWNAAKAPARADMYEGQQRRRRELATKAKAQRERIRESGLSPTERRAFYSVAAMQAAAERKELAEAIKAERETFRKERPQDYRSWVADRAQEGDPAAIRQVRGWAYADKRKAREIERADAVAENGPHLAVSDGQVHDPAPPRRLSERVSWNVDRDTGTVAYQLDGRDAFRDSGRRIDYTTEGQRDADAIEAGLLLAREKFGGTALNITGPDEFRQRVLAVAVERGLDVRFSDPELERRRIEGLRERQEARRTPGQRPDWTRHRGTIASDGGSPQRPPEAPQEPPARRMTAEEAAAALARPRPVEPVQEVVEALAIQQAGEAYRQQLEREFRERYGERPDPAQAAGRIDRWMARQKANLWDRDHGNAQIDVQVQERMAHLRSDAPDAREFRAREWKAAEAQYGREHEEWARDRAAALMAAPEQQGDDARARREAEVRALAEKQKQQAAEREQQQERGRDDDNDNTPEVSR
SIO_010081: PJW04_RS22555
subclass of: SO_0000673
so part of: PJW04_RS22555
location: complement(13353..15791)
location: region:13353-15791:-1
so has part: feature:13353-15791:-1:exon

WP_046932161.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:13353-15791:-1:exon

PJW04_RS22560
type: Gene
subclass of: SO_0000704
RO_0002162: 442694
gene: mobA
locus tag: PJW04_RS22560
old locus tag: PJW04_22560
so part of: sequence
location: complement(15781..16176)
location: region:15781-16176:-1
so has part: feature:15781-16176:-1:exon
subclass of: SO_0000010

79909988
type: Gene
SIO_000068: ncbigene

position:15781:-1
position: 15781
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:16176:-1
position: 16176
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:15781-16176:-1:exon

PJW04_RS22560
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 442694
gene: mobA
locus tag: PJW04_RS22560
old locus tag: PJW04_22560
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017173685.1
GO process: GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: plasmid mobilization protein MobA
translation: MARKKSETRKRTVVAYARMTPEEYADVQEKAAASGNTVSAFIRAASLGRKLRDRQDRLAVAEVVGVAAEMRRLGGLQKHLFYEGGKARSAEYSAVLAALKAAGDELTLALKRLGPDEAEMGRDDEAGPDDY
SIO_010081: PJW04_RS22560
subclass of: SO_0000673
so part of: PJW04_RS22560
location: complement(15781..16176)
location: region:15781-16176:-1
so has part: feature:15781-16176:-1:exon

WP_017154702.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:15781-16176:-1:exon

PJW04_RS22565
type: Gene
subclass of: SO_0000704
RO_0002162: 442694
locus tag: PJW04_RS22565
old locus tag: PJW04_22565
so part of: sequence
location: 16575..16880
location: region:16575-16880:1
so has part: feature:16575-16880:1:exon
subclass of: SO_0000010

79909989
type: Gene
SIO_000068: ncbigene

position:16575:1
position: 16575
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:16880:1
position: 16880
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:16575-16880:1:exon

PJW04_RS22565
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 442694
locus tag: PJW04_RS22565
old locus tag: PJW04_22565
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017154703.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MAATRRKTYEPDIFRALDQEFAAAPEVPAGERPATAAELVEALRGRIKEMAGKGYTLDQIIERMKAKGIEQPPVRAVKAAMRGDTARQKRPRRKPASQAGA
SIO_010081: PJW04_RS22565
subclass of: SO_0000673
so part of: PJW04_RS22565
location: 16575..16880
location: region:16575-16880:1
so has part: feature:16575-16880:1:exon

WP_017154703.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:16575-16880:1:exon

PJW04_RS22570
type: Gene
subclass of: SO_0000704
RO_0002162: 442694
locus tag: PJW04_RS22570
old locus tag: PJW04_22570
so part of: sequence
location: 16923..18632
location: region:16923-18632:1
so has part: feature:16923-18632:1:exon
subclass of: SO_0000010

79909990
type: Gene
SIO_000068: ncbigene

position:16923:1
position: 16923
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:18632:1
position: 18632
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:16923-18632:1:exon

PJW04_RS22570
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 442694
locus tag: PJW04_RS22570
old locus tag: PJW04_22570
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017173684.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: type IV secretion system DNA-binding domain-containing protein
translation: MPEIQVGERGNAQWFKYVMLPRVVLFVLAAWLGIWIGTWPFAPSGMARAGYAFNLALWTGIPVSIAYMLYLGWRDRKADKEAATQPAATQDVDDAQREAWRHDFKGLFIGHSTGFLQARKPDNSGWPTPEGAPIELSPEDAAKNILVLGGIGSGKTTRSVNPLLSRVLQQSPGALIFDIKTDYRDTAEKIAEACGRSVKIVGDGGMTLNLFRGCTPEVAASYLKSCFLTEGQGHGDSAFWVDSAVESCRHALNLLNLLDPPNYSIAGCYEAVFYDSVRDKLLAAGAEQIESMTDRQQRLFLQSQRFFVEVWNKHDEKLKRNIMGTINSVLSPFNHPDLVDAFSQASVQGEADLSELIRDGAVFIVNLPVTKYGKEGARFAYLLIKLRFFTMMRERKQHPEWDQQRHVAFICDEYQAIIDPVSDGDFWDKSRSTKTVGIVSMQGVASLTQALGGNRQASDAILQNFRQRIIYRTEDTETLRMIQSVLGQMDVTVTTGSASYSESRSNPTGLHGSASRSESTSETESTSMTRQELFGPADMRALTADECLFIGNIAERSVDEVLRVEPLYM
SIO_010081: PJW04_RS22570
subclass of: SO_0000673
so part of: PJW04_RS22570
location: 16923..18632
location: region:16923-18632:1
so has part: feature:16923-18632:1:exon

WP_046932163.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:16923-18632:1:exon

PJW04_RS22575
type: Gene
subclass of: SO_0000704
RO_0002162: 442694
locus tag: PJW04_RS22575
old locus tag: PJW04_22575
so part of: sequence
location: 18644..18775
location: region:18644-18775:1
so has part: feature:18644-18775:1:exon
subclass of: SO_0000010

79909991
type: Gene
SIO_000068: ncbigene

position:18644:1
position: 18644
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:18775:1
position: 18775
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:18644-18775:1:exon

PJW04_RS22575
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 442694
locus tag: PJW04_RS22575
old locus tag: PJW04_22575
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MAWNKNATGKSWEQVRILDLRFAKAGLAFGVIVGVLAGLFFLP
SIO_010081: PJW04_RS22575
subclass of: SO_0000673
so part of: PJW04_RS22575
location: 18644..18775
location: region:18644-18775:1
so has part: feature:18644-18775:1:exon

WP_017154705.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:18644-18775:1:exon