Xanthomonas perforans strain GEV872 plasmid pGEV872.2.
type: Entry
definition: Xanthomonas perforans strain GEV872 plasmid pGEV872.2.
sequence version: NZ_CP116307.1
sequence date: 2023-04-07
sequence: sequence
division: CON
label: NZ_CP116307.1
type: RefSeq
SIO_000068: refseq
dblink: PRJNA224116
dblink: SAMN32758707
keyword: RefSeq
source: Xanthomonas perforans (Xanthomonas euvesicatoria pv. perforans)
organism: Xanthomonas perforans
taxonomy: Bacteria; Pseudomonadota; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.
reference: 1
reference: 2
comment: REFSEQ INFORMATION: The reference sequence is identical to\nCP116307.1.\nThe annotation was added by the NCBI Prokaryotic Genome Annotation\nPipeline (PGAP). Information about PGAP can be found here:\nhttps://www.ncbi.nlm.nih.gov/genome/annotation_prok/\n\n##Genome-Assembly-Data-START##\nAssembly Date :: 08-AUG-2021\nAssembly Method :: Canu v. 2.1\nAssembly Name :: UFL_GEV872_pb1.1\nGenome Representation :: Full\nExpected Final Version :: Yes\nGenome Coverage :: 1100x\nSequencing Technology :: PacBio Sequel; Illumina MiSeq\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI RefSeq\nAnnotation Date :: 01/27/2023 07:36:58\nAnnotation Pipeline :: NCBI Prokaryotic Genome\n Annotation Pipeline (PGAP)\nAnnotation Method :: Best-placed reference protein\n set; GeneMarkS-2+\nAnnotation Software revision :: 6.4\nFeatures Annotated :: Gene; CDS; rRNA; tRNA; ncRNA\nGenes (total) :: 4,515\nCDSs (total) :: 4,419\nGenes (coding) :: 4,330\nCDSs (with protein) :: 4,330\nGenes (RNA) :: 96\nrRNAs :: 2, 2, 2 (5S, 16S, 23S)\ncomplete rRNAs :: 2, 2, 2 (5S, 16S, 23S)\ntRNAs :: 55\nncRNAs :: 35\nPseudo Genes (total) :: 89\nCDSs (without protein) :: 89\nPseudo Genes (ambiguous residues) :: 0 of 89\nPseudo Genes (frameshifted) :: 45 of 89\nPseudo Genes (incomplete) :: 47 of 89\nPseudo Genes (internal stop) :: 18 of 89\nPseudo Genes (multiple problems) :: 17 of 89\n##Genome-Annotation-Data-END##

sequence
subclass of: SO_0000155
sequence length: 56105
topology: linear
so has quality: SO_0000987
location: 1..56105
location: region:1-56105:1
RO_0002162: 442694

NZ_CP116307
type: RefSeq
SIO_000068: refseq

PRJNA224116
type: BioProject
SIO_000068: bioproject

SAMN32758707
type: BioSample
SIO_000068: biosample

1
title: Estimating rates of bacterial mutation during epidemic
author: Sharma, A.
author: Timilsina, S.
author: Abrahamian, P.
author: Minsavage, G.V.
author: Jones, J.B.
author: Vallad, G.E.
author: Goss, E.M.
journal: Unpublished

2
title: Direct Submission
author: Sharma, A.
author: Timilsina, S.
author: Abrahamian, P.
author: Minsavage, G.V.
author: Jones, J.B.
author: Vallad, G.E.
author: Goss, E.M.
journal: Submitted (16-JAN-2023) Plant Pathology, University of Florida, 2550 Hull Rd, Gainesville, Fl 32611, USA

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition
type: FuzzyPosition

position:56105:1
position: 56105
reference: sequence
type: ForwardStrandPosition
type: ExactPosition
type: FuzzyPosition

feature:1-56105:1:source
so part of: sequence
organism: Xanthomonas perforans
mol type: genomic DNA
strain: GEV872
host: Tomato
plasmid: pGEV872.2
country: USA: Immokalee, FL
collection date: 2012-08-24

442694
type: Taxonomy
SIO_000068: taxonomy

PJW04_RS22140
type: Gene
subclass of: SO_0000704
RO_0002162: 442694
locus tag: PJW04_RS22140
old locus tag: PJW04_22140
so part of: sequence
location: <1..866
location: region:1-866:1
so has part: feature:1-866:1:exon
subclass of: SO_0000010

79909904
type: Gene
SIO_000068: ncbigene

position:866:1
position: 866
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1-866:1:exon

PJW04_RS22140
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 442694
locus tag: PJW04_RS22140
old locus tag: PJW04_22140
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017158590.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 3
transl table: 11
product: transposase
translation: SDALQDLIARLAERLHAEADTVVAQAQARFQAQLQERTQALEQARQEAGSLRTQLQRCETALQAEREAGDAARSEVARRTTELAQLEERIAGLTARLAEHDAHAKSLEHKHEHAREALEHYRTSVKDQREQEQRRHEHQVQELQVALRQANEALTAKNHDLMQLNRENGQWLERQTRLERELAQARQRADAQQRERDALRLAAAEHQALQVRWTDDVHALEGVRTELSAARTELVEERQRREHAEADTLRATVRLSTLEQLLAQLRPAHSVGEPENAIAAGAMPAGK
SIO_010081: PJW04_RS22140
subclass of: SO_0000673
so part of: PJW04_RS22140
location: <1..866
location: region:1-866:1
so has part: feature:1-866:1:exon

WP_271412323.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1-866:1:exon

PJW04_RS22145
type: Gene
subclass of: SO_0000704
RO_0002162: 442694
gene: xopE
locus tag: PJW04_RS22145
old locus tag: PJW04_22145
so part of: sequence
location: 999..2075
location: region:999-2075:1
so has part: feature:999-2075:1:exon
subclass of: SO_0000010

79909905
type: Gene
SIO_000068: ncbigene

position:999:1
position: 999
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2075:1
position: 2075
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:999-2075:1:exon

PJW04_RS22145
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 442694
gene: xopE
locus tag: PJW04_RS22145
old locus tag: PJW04_22145
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011347479.1
GO process: GO:0030254 - protein secretion by the type III secretion system [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: XopE/AvrPphe family type III secretion system effector
translation: MGLCSSKPSVAGSPVAGSPEHYLTHTTEQTTPSTPSSPEAPMSPSLHGLVALGSSGTRRDRFRQPTLQPHEVQQAAYQLGMRLSGRPIEDASDRQRLADATETVHETRLALHRGRGNVDSDLRLSNGRSATYSSLSYCLGENDENLLAGSALAAGAGNCDHNAAINARRHAVRMEDGGQMMNVRDYEQTHLYALYQPPSSAEAEESPVVLDSWGDGPAVLLRDSHWAETYGTSTNVIERFDKRDAIDALARTTAFRAEIEDPQTDLHANARDLETAFLANPAPGDIFSAMPVIAPELAQSTRQRLQEYSPRTRQALAADAARQAYGLDNAQPISPRTTAAILEDAERLDALGRPPLSW
SIO_010081: PJW04_RS22145
subclass of: SO_0000673
so part of: PJW04_RS22145
location: 999..2075
location: region:999-2075:1
so has part: feature:999-2075:1:exon

WP_033482209.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:999-2075:1:exon

PJW04_RS22150
type: Gene
subclass of: SO_0000704
RO_0002162: 442694
locus tag: PJW04_RS22150
old locus tag: PJW04_22150
pseudo: true
so part of: sequence
location: <2374..3066
location: region:2374-3066:1
so has part: feature:2374-3066:1:exon
subclass of: SO_0000010

79909906
type: Gene
SIO_000068: ncbigene

position:2374:1
position: 2374
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

position:3066:1
position: 3066
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2374-3066:1:exon

PJW04_RS22150
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 442694
locus tag: PJW04_RS22150
old locus tag: PJW04_22150
inference: COORDINATES: similar to AA sequence:RefSeq:WP_005933836.1
note: incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: transposase
SIO_010081: PJW04_RS22150
subclass of: SO_0000673
so part of: PJW04_RS22150
location: <2374..3066
location: region:2374-3066:1
so has part: feature:2374-3066:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2374-3066:1:exon

PJW04_RS22155
type: Gene
subclass of: SO_0000704
RO_0002162: 442694
locus tag: PJW04_RS22155
old locus tag: PJW04_22155
so part of: sequence
location: complement(3054..4091)
location: region:3054-4091:-1
so has part: feature:3054-4091:-1:exon
subclass of: SO_0000010

79909907
type: Gene
SIO_000068: ncbigene

position:3054:-1
position: 3054
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4091:-1
position: 4091
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3054-4091:-1:exon

PJW04_RS22155
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 442694
locus tag: PJW04_RS22155
old locus tag: PJW04_22155
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017160582.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MRKFKSKYMLGACIVGSIVSAGAAAQVAAINNTGRAEAMSAWETTLKHEAPAMEGCFSSTFPDMGWQAVRCGAPPKLVMKPRHVASGNVRTTTDNRVLITGNGDDYAARTGRLTHSAVGSFPSVSGVTTGVVQYSLQINTDNDSNPAACAQFGFSSCRTWQQYVYSSDADEDSSNGFDPVIFIESWVYADSTSEYDAAGCPSGWDAYEGNACVINSESVRVPLVPVSGIAGVKLTGSATSGGVDTVSFSVNGRAYRVSQRASTVDINKIWRLTEFNIFGNGARTQTVSFNRGSHVTVNVAVNDGTTNAPTCLGNAGQTFEQNNLTRGSCSVFGGASPGISFPQSN
SIO_010081: PJW04_RS22155
subclass of: SO_0000673
so part of: PJW04_RS22155
location: complement(3054..4091)
location: region:3054-4091:-1
so has part: feature:3054-4091:-1:exon

WP_017160582.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3054-4091:-1:exon

PJW04_RS22160
type: Gene
subclass of: SO_0000704
RO_0002162: 442694
locus tag: PJW04_RS22160
old locus tag: PJW04_22160
so part of: sequence
location: complement(4485..5807)
location: region:4485-5807:-1
so has part: feature:4485-5807:-1:exon
subclass of: SO_0000010

79909908
type: Gene
SIO_000068: ncbigene

position:4485:-1
position: 4485
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5807:-1
position: 5807
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4485-5807:-1:exon

PJW04_RS22160
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 442694
locus tag: PJW04_RS22160
old locus tag: PJW04_22160
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017160583.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: right-handed parallel beta-helix repeat-containing protein
translation: MNLSLRTIVAIAVAACVPPCTAVAADWYIAPTGNDGNPGTRAAPFASVMAAQAAASSGDTVYLRGGTYRLTNANISVVRQPYAVVNEITKPGIAYVNVANERPVFDFSAVTPTGLRVAAFRVASNNCVFRGFEVVGVRITIADRLTQSEAFRVDRGNGNLFENLAIHDGQAIGWYLVSGSDNRVHNVDAYNNRGLNAFSDGNIDGFGVHPTLAGSTGNLIEGSRAWFNSDDGFDLINAAAAVTLQRNWSFYNGYDSAFTPLGNGTGFKAGGYGRNGSDYPKPVPRHIVRFNLAVGNRSNGLYANHHIGGQEWISNTSIKNGRANYDMQSTLSDNVTDVPGYDHHLANNLGFGTRIEMINLGSASENDIGRNSFNLPLVISAGDFVSLDERQLMRPRQANGDLPIITFATLAPGSALIDAGADTGEAFNGHAPDLGAFEAR
SIO_010081: PJW04_RS22160
subclass of: SO_0000673
so part of: PJW04_RS22160
location: complement(4485..5807)
location: region:4485-5807:-1
so has part: feature:4485-5807:-1:exon

WP_017160583.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4485-5807:-1:exon

PJW04_RS22165
type: Gene
subclass of: SO_0000704
RO_0002162: 442694
locus tag: PJW04_RS22165
old locus tag: PJW04_22165
so part of: sequence
location: complement(6484..7428)
location: region:6484-7428:-1
so has part: feature:6484-7428:-1:exon
subclass of: SO_0000010

79909909
type: Gene
SIO_000068: ncbigene

position:6484:-1
position: 6484
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7428:-1
position: 7428
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6484-7428:-1:exon

PJW04_RS22165
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 442694
locus tag: PJW04_RS22165
old locus tag: PJW04_22165
EC number: 3.1.21.-
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013847909.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: Eco29kI family restriction endonuclease
translation: MAKAPRLRPEQTVIVEVRERLARLREILPTLSRPAATKTMAELLALTGEIEEARSNLDPIKEPGASFDPANPDTAGRLVALALVAQDRVPLARIARTYGSGVYAIYYHGDHPAYAAVSGTETPIYVGKADPKSADARTSREQGPQLYSRLVDHRRMIKTVGGYAADQGLPHSLKVDDFTCHRLVCATNAQLVAERHLIRTFRPIWNNEMGICWGISKHGDAATTRANKRSPWDVMHPGRNWAMAESLEDKMSPDVITTRIAEHFAANPPHRSRARIVRGFLSDFAQNAAMTPSEVVDDDDAVAATVSGELPPTE
SIO_010081: PJW04_RS22165
subclass of: SO_0000673
so part of: PJW04_RS22165
location: complement(6484..7428)
location: region:6484-7428:-1
so has part: feature:6484-7428:-1:exon

WP_223670422.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:6484-7428:-1:exon

PJW04_RS22170
type: Gene
subclass of: SO_0000704
RO_0002162: 442694
gene: dcm
locus tag: PJW04_RS22170
old locus tag: PJW04_22170
so part of: sequence
location: complement(7429..8586)
location: region:7429-8586:-1
so has part: feature:7429-8586:-1:exon
subclass of: SO_0000010

79909910
type: Gene
SIO_000068: ncbigene

position:7429:-1
position: 7429
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8586:-1
position: 8586
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7429-8586:-1:exon

PJW04_RS22170
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 442694
gene: dcm
locus tag: PJW04_RS22170
old locus tag: PJW04_22170
EC number: 2.1.1.37
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015718869.1
GO function: GO:0003886 - DNA (cytosine-5-)-methyltransferase activity [Evidence IEA]
GO process: GO:0006304 - DNA modification [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DNA (cytosine-5-)-methyltransferase
translation: MRSVELFTGCGGLALGLSRAGFHHELMVEWNGDAVETVLHNRRRRIKHVSEWPLEKADVREVTWRRFGGLDLVAGGPPCQPFSIGGKHKGQGDNRDMWPEVIRAVREIRPRGFLFENVRGLARPAFANYLRWIIAHLHHPEITRLDGEDHARHTRRLEASRLASAYRVIVVQVNAADYGAAQKRHRVIVAGIRSDLACGLATPTPTHSRERLLWDQWVSGEYWKRHGLRQPADAFIPSTDAAAVRALRALRVVPKGKPWVTTRDALMGLGEPNGKSNHVFQDGARVYPGHTGSPLDQPAKALKAGDHGVPGGENMMVRDDGSVRYFTTREAARLQGLPDTYQFPRSWTESMRQLGNAVPSQLAEAMGTWMAETLATAPASDIEAA
SIO_010081: PJW04_RS22170
subclass of: SO_0000673
so part of: PJW04_RS22170
location: complement(7429..8586)
location: region:7429-8586:-1
so has part: feature:7429-8586:-1:exon

WP_046932420.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:7429-8586:-1:exon

PJW04_RS22175
type: Gene
subclass of: SO_0000704
RO_0002162: 442694
locus tag: PJW04_RS22175
old locus tag: PJW04_22175
so part of: sequence
location: complement(8579..8863)
location: region:8579-8863:-1
so has part: feature:8579-8863:-1:exon
subclass of: SO_0000010

79909911
type: Gene
SIO_000068: ncbigene

position:8579:-1
position: 8579
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8863:-1
position: 8863
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8579-8863:-1:exon

PJW04_RS22175
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 442694
locus tag: PJW04_RS22175
old locus tag: PJW04_22175
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: ribbon-helix-helix domain-containing protein
translation: MPPELFIASMMGGLQNCSNLQQSAAGADYMANDSQNSVRVTTTLTRQQHAYLEHIAEQNGVKVAWLVRRAVENLIEQAQVPLFLLDIREGRSNA
SIO_010081: PJW04_RS22175
subclass of: SO_0000673
so part of: PJW04_RS22175
location: complement(8579..8863)
location: region:8579-8863:-1
so has part: feature:8579-8863:-1:exon

WP_198931176.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:8579-8863:-1:exon

PJW04_RS22180
type: Gene
subclass of: SO_0000704
RO_0002162: 442694
locus tag: PJW04_RS22180
old locus tag: PJW04_22180
so part of: sequence
location: 10516..11325
location: region:10516-11325:1
so has part: feature:10516-11325:1:exon
subclass of: SO_0000010

79909912
type: Gene
SIO_000068: ncbigene

position:10516:1
position: 10516
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:11325:1
position: 11325
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:10516-11325:1:exon

PJW04_RS22180
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 442694
locus tag: PJW04_RS22180
old locus tag: PJW04_22180
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017160643.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF3560 domain-containing protein
translation: MNSYEAKLEARRERLLTRAQEANKNADSLHKKARSMAGAIPFGQPILVGHHSESRDRNYRERIHKTFGKAFAEMDNAQHYASKAAAVGTGGVSSDDPDAVAKLRKELQAMEASQERMKAANKVIRTKKTPEEREAALISQGFTAAVAADILKPDFCGRVGFPSYALSNNTANMRRVRLRIDELEKRKASADVERRGDGFTYREDVAENRVMFLFDAKPDQATRTLLKRYGFKWSPSRDGQPWVRQLNNAGIYNGRQVFDALNSSNIGDI
SIO_010081: PJW04_RS22180
subclass of: SO_0000673
so part of: PJW04_RS22180
location: 10516..11325
location: region:10516-11325:1
so has part: feature:10516-11325:1:exon

WP_040156349.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:10516-11325:1:exon

PJW04_RS22185
type: Gene
subclass of: SO_0000704
RO_0002162: 442694
locus tag: PJW04_RS22185
old locus tag: PJW04_22185
so part of: sequence
location: 11409..11600
location: region:11409-11600:1
so has part: feature:11409-11600:1:exon
subclass of: SO_0000010

79909913
type: Gene
SIO_000068: ncbigene

position:11409:1
position: 11409
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:11600:1
position: 11600
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11409-11600:1:exon

PJW04_RS22185
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 442694
locus tag: PJW04_RS22185
old locus tag: PJW04_22185
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012329509.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MKIFRFLDDFIVVIAKAVIRAVFAVGTGLVYIQFIGGLLLTLAFGTSALVLVLAAVRRAVLGA
SIO_010081: PJW04_RS22185
subclass of: SO_0000673
so part of: PJW04_RS22185
location: 11409..11600
location: region:11409-11600:1
so has part: feature:11409-11600:1:exon

WP_015462633.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:11409-11600:1:exon

PJW04_RS22190
type: Gene
subclass of: SO_0000704
RO_0002162: 442694
locus tag: PJW04_RS22190
old locus tag: PJW04_22190
so part of: sequence
location: 11602..12009
location: region:11602-12009:1
so has part: feature:11602-12009:1:exon
subclass of: SO_0000010

79909914
type: Gene
SIO_000068: ncbigene

position:11602:1
position: 11602
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:12009:1
position: 12009
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11602-12009:1:exon

PJW04_RS22190
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 442694
locus tag: PJW04_RS22190
old locus tag: PJW04_22190
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010368856.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MTKTTKRATAHLAALVDELPNLITGLDQEIQSITETMAGLKRQGLVYASPFWKRDKSGQPKYFYLLHTQRKGEPRNREYIGCDANRIARANAAIERAKQYDNLNQRLTQLQSQAEQGVRVLADAKRVLTGNGRTW
SIO_010081: PJW04_RS22190
subclass of: SO_0000673
so part of: PJW04_RS22190
location: 11602..12009
location: region:11602-12009:1
so has part: feature:11602-12009:1:exon

WP_040156347.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:11602-12009:1:exon

PJW04_RS22195
type: Gene
subclass of: SO_0000704
RO_0002162: 442694
locus tag: PJW04_RS22195
old locus tag: PJW04_22195
so part of: sequence
location: 12036..12317
location: region:12036-12317:1
so has part: feature:12036-12317:1:exon
subclass of: SO_0000010

79909915
type: Gene
SIO_000068: ncbigene

position:12036:1
position: 12036
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:12317:1
position: 12317
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:12036-12317:1:exon

PJW04_RS22195
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 442694
locus tag: PJW04_RS22195
old locus tag: PJW04_22195
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010368854.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MNEDQTQFAPTAIDAAIDALDELSKGHQFCGDDLIAAAYALDYLAMQSGDLRRIASDPGFAGSMQGTETAERVARLLREVRRHIMPAALATLH
SIO_010081: PJW04_RS22195
subclass of: SO_0000673
so part of: PJW04_RS22195
location: 12036..12317
location: region:12036-12317:1
so has part: feature:12036-12317:1:exon

WP_046932490.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:12036-12317:1:exon

PJW04_RS22200
type: Gene
subclass of: SO_0000704
RO_0002162: 442694
locus tag: PJW04_RS22200
old locus tag: PJW04_22200
so part of: sequence
location: 12640..13461
location: region:12640-13461:1
so has part: feature:12640-13461:1:exon
subclass of: SO_0000010

79909916
type: Gene
SIO_000068: ncbigene

position:12640:1
position: 12640
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:13461:1
position: 13461
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:12640-13461:1:exon

PJW04_RS22200
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 442694
locus tag: PJW04_RS22200
old locus tag: PJW04_22200
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017113814.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MPAVDPGSHTPGPEPTATIGRPHKRVHWRQPKPPSGKKRRPAVLDATREALVRSLEQRRGSLWMRISRNVIVAGYALDKALTRVRALRKDGAESLLAMSVALLYLADVRTGFVGKPRQGGGPWQRYTLRDLAQLAYGAQTGAELERAKRSIDMMVSLGWAFPTKQVRRHTKDAEGRDGWCSEPGVRRLNFQRLCDMAGTSWLLKRDRKHADQARGTGVASFAQAHARRQSPQDAGTTPRTGAARPAAHRATGDPPGGAQSAVQHISDILAMFK
SIO_010081: PJW04_RS22200
subclass of: SO_0000673
so part of: PJW04_RS22200
location: 12640..13461
location: region:12640-13461:1
so has part: feature:12640-13461:1:exon

WP_046932433.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:12640-13461:1:exon

PJW04_RS22205
type: Gene
subclass of: SO_0000704
RO_0002162: 442694
locus tag: PJW04_RS22205
old locus tag: PJW04_22205
so part of: sequence
location: 14096..14800
location: region:14096-14800:1
so has part: feature:14096-14800:1:exon
subclass of: SO_0000010

79909917
type: Gene
SIO_000068: ncbigene

position:14096:1
position: 14096
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:14800:1
position: 14800
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:14096-14800:1:exon

PJW04_RS22205
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 442694
locus tag: PJW04_RS22205
old locus tag: PJW04_22205
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017162873.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DNA-binding protein
translation: MDPSQDARDRILAAADALYEQAGREVFPTVDAVRKAAKANMNEASTVMKEWRRTQARPASVAVQVPEPVQQAAGLAVVAIWQAAQEVANDALRAAQAGWEAERQEVEALSQQMADAYEAQALELEAAQARIAELDAALQQAVTAAATHQAALDQVRTALVDLQQRASTAEARASELRTELDRAHLVAAEQRNAAGQAREEAATLRGRLAAFEGMATSPTPAKTNPGKPRGKGTG
SIO_010081: PJW04_RS22205
subclass of: SO_0000673
so part of: PJW04_RS22205
location: 14096..14800
location: region:14096-14800:1
so has part: feature:14096-14800:1:exon

WP_046932434.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:14096-14800:1:exon

PJW04_RS22210
type: Gene
subclass of: SO_0000704
RO_0002162: 442694
locus tag: PJW04_RS22210
old locus tag: PJW04_22210
so part of: sequence
location: 14913..15284
location: region:14913-15284:1
so has part: feature:14913-15284:1:exon
subclass of: SO_0000010

79909918
type: Gene
SIO_000068: ncbigene

position:14913:1
position: 14913
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:15284:1
position: 15284
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:14913-15284:1:exon

PJW04_RS22210
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 442694
locus tag: PJW04_RS22210
old locus tag: PJW04_22210
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017160559.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: single-stranded DNA-binding protein
translation: MQSNVFVGNLAKNPTLSGNGDRAYCRFTLISNEYAGRDGEGAARERTVTLSFVAFKSMADRIARNCMKGDQLIVEHRIANNNREVDGETVYGFDFIAERVQFGAPGKEKREHLAENQGATTEP
SIO_010081: PJW04_RS22210
subclass of: SO_0000673
so part of: PJW04_RS22210
location: 14913..15284
location: region:14913-15284:1
so has part: feature:14913-15284:1:exon

WP_017160559.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:14913-15284:1:exon

PJW04_RS22215
type: Gene
subclass of: SO_0000704
RO_0002162: 442694
locus tag: PJW04_RS22215
old locus tag: PJW04_22215
so part of: sequence
location: 15281..15676
location: region:15281-15676:1
so has part: feature:15281-15676:1:exon
subclass of: SO_0000010

79909919
type: Gene
SIO_000068: ncbigene

position:15281:1
position: 15281
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:15676:1
position: 15676
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:15281-15676:1:exon

PJW04_RS22215
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 442694
locus tag: PJW04_RS22215
old locus tag: PJW04_22215
inference: COORDINATES: similar to AA sequence:RefSeq:WP_007968825.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MTAPNPRIDAVQFDRVAASCRWRPYSLGAVRSILVDGASIAEAATAHQITAKHARVLMNRFLAKAEQQRLEEFMQVEPPKQPIALLESYANEIVTLRDKGYSADQIAAYLKRHGVVTNATKVRNFIRSNRA
SIO_010081: PJW04_RS22215
subclass of: SO_0000673
so part of: PJW04_RS22215
location: 15281..15676
location: region:15281-15676:1
so has part: feature:15281-15676:1:exon

WP_223670292.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:15281-15676:1:exon

PJW04_RS22220
type: Gene
subclass of: SO_0000704
RO_0002162: 442694
locus tag: PJW04_RS22220
old locus tag: PJW04_22220
so part of: sequence
location: 15673..16533
location: region:15673-16533:1
so has part: feature:15673-16533:1:exon
subclass of: SO_0000010

79909920
type: Gene
SIO_000068: ncbigene

position:15673:1
position: 15673
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:16533:1
position: 16533
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:15673-16533:1:exon

PJW04_RS22220
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 442694
locus tag: PJW04_RS22220
old locus tag: PJW04_22220
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010363048.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ParA family protein
translation: MKTVVFANQKGGVGKSAILDQLAYYFVLQRQLRVVVIDFDHQKNTTKALTTGGLCTVSPVTSSQILSAGKSAIGRADFVLVPGDGELYKMEETAAELTAFVKYAKEQGKTGARDGRSEYATNLLSALTEIAPHFDICLIDTNPNPDIRQLASLVVADYVVSPIQLNQEAIDGIGDLLNHPKLGIRKIKATINKKLTLIGILPNMVEPTPFQRDNFTALATHYPQLLISMSPLPGFAAVKKTTAIPEAQAVGQPVWKLGKTSARDAWTQMRPVFDKIAEAMEVPKND
SIO_010081: PJW04_RS22220
subclass of: SO_0000673
so part of: PJW04_RS22220
location: 15673..16533
location: region:15673-16533:1
so has part: feature:15673-16533:1:exon

WP_015462640.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:15673-16533:1:exon

PJW04_RS22225
type: Gene
subclass of: SO_0000704
RO_0002162: 442694
locus tag: PJW04_RS22225
old locus tag: PJW04_22225
so part of: sequence
location: 16526..17662
location: region:16526-17662:1
so has part: feature:16526-17662:1:exon
subclass of: SO_0000010

79909921
type: Gene
SIO_000068: ncbigene

position:16526:1
position: 16526
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:17662:1
position: 17662
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:16526-17662:1:exon

PJW04_RS22225
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 442694
locus tag: PJW04_RS22225
old locus tag: PJW04_22225
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015462641.1
GO function: GO:0003677 - DNA binding [Evidence IEA]
GO process: GO:0007059 - chromosome segregation [Evidence IEA]; GO:0000910 - cytokinesis [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ParB/RepB/Spo0J family partition protein
translation: MIDLSALNGEPDDQVTPVSEPDGTPFRIKLADIERDPKQPRKRFTQADIDALAENIKERGVKLAISVKTHPTKPGKWLINDGEVRWRASKQAGVEDIPTIVDEDFDSFDQVNANELRYALHPMDLAEFIKEKVGEGFKKGVIAKRLGKPANAITELLALVDAPACVTDACMSGRCTSPKTLYELRALAEKYPEQVQAWCDSDVEITRASVAALGDSLKEKKAPKPSDPASGDAGTSPEAGGKFRHDEKNGGGSQGTGAAGSDDGDEGPGSSGAGKFRHDEKTQGGNQDEAAGSGAGAGSGDADTGELTSWPRGKAVSDPDSMKRPLLLVEHDGRAAAVLLNRRPSTAGLIRIRYEDGGGDAEVDAGTVKINRLMEGEK
SIO_010081: PJW04_RS22225
subclass of: SO_0000673
so part of: PJW04_RS22225
location: 16526..17662
location: region:16526-17662:1
so has part: feature:16526-17662:1:exon

WP_046932437.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:16526-17662:1:exon

PJW04_RS22230
type: Gene
subclass of: SO_0000704
RO_0002162: 442694
gene: mobC
locus tag: PJW04_RS22230
old locus tag: PJW04_22230
so part of: sequence
location: 18358..18897
location: region:18358-18897:1
so has part: feature:18358-18897:1:exon
subclass of: SO_0000010

79909922
type: Gene
SIO_000068: ncbigene

position:18358:1
position: 18358
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:18897:1
position: 18897
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:18358-18897:1:exon

PJW04_RS22230
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 442694
gene: mobC
locus tag: PJW04_RS22230
old locus tag: PJW04_22230
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015462642.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: plasmid mobilization relaxosome protein MobC
translation: MEKPSRSLNLHLGPERKARWVAYCAARGKTPGAAICEAIDHTLATAPKEPAKLYRQTHQAPDEPKQRFEILLTASEKAAVRERANIERCSMNRWGVDAIRAGLTGEPQFGTKEVDTLGESNYQLLAIGRNLNQIARRLNEGKSARVTVEQIKMLADRIDQHTKKVADAIRASQERWNIE
SIO_010081: PJW04_RS22230
subclass of: SO_0000673
so part of: PJW04_RS22230
location: 18358..18897
location: region:18358-18897:1
so has part: feature:18358-18897:1:exon

WP_089113771.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:18358-18897:1:exon

PJW04_RS22235
type: Gene
subclass of: SO_0000704
RO_0002162: 442694
locus tag: PJW04_RS22235
old locus tag: PJW04_22235
so part of: sequence
location: 18894..19997
location: region:18894-19997:1
so has part: feature:18894-19997:1:exon
subclass of: SO_0000010

79909923
type: Gene
SIO_000068: ncbigene

position:18894:1
position: 18894
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:19997:1
position: 19997
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:18894-19997:1:exon

PJW04_RS22235
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 442694
locus tag: PJW04_RS22235
old locus tag: PJW04_22235
inference: COORDINATES: similar to AA sequence:RefSeq:WP_007968816.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: relaxase/mobilization nuclease domain-containing protein
translation: MTRQSIELDLSDFADAARITYKKTRKAKRTPRGAKITGPESPKPNRSGPAIRATIDRITRRVPEVMVKITQGKKNPETGKLEILCKDMRGVRAHMQYISRNGAVELEDENGQRYLGQEDGRDVLRAFARAGTPIPERDGRRREVYSIVLSMPPGTDRDAVKAAARDFAAAEFSGRQYVLAAHDDDAHPHVHLAVKTADARGVRLNPRKPDLQRWRELFAEKLRDHGIEANASDRRLRGIVKKSERQAIRSLKDRGETPRLVAQQEAQAGDEAAGRSRHANPAQNKISAGRRRITAAYGKVARSLATGDAEDRALALRIVELVKAMPPPTTRHEDRVAQLRANNKTAGVDCGADRDAAKEKPEQGRDR
SIO_010081: PJW04_RS22235
subclass of: SO_0000673
so part of: PJW04_RS22235
location: 18894..19997
location: region:18894-19997:1
so has part: feature:18894-19997:1:exon

WP_046932439.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:18894-19997:1:exon

PJW04_RS22240
type: Gene
subclass of: SO_0000704
RO_0002162: 442694
locus tag: PJW04_RS22240
old locus tag: PJW04_22240
so part of: sequence
location: complement(20056..20658)
location: region:20056-20658:-1
so has part: feature:20056-20658:-1:exon
subclass of: SO_0000010

79909924
type: Gene
SIO_000068: ncbigene

position:20056:-1
position: 20056
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:20658:-1
position: 20658
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:20056-20658:-1:exon

PJW04_RS22240
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 442694
locus tag: PJW04_RS22240
old locus tag: PJW04_22240
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015462644.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: TrbM/KikA/MpfK family conjugal transfer protein
translation: MYLSVRSLALAVAACAAAGAASAQEFTGDTKLACEAILCLSTGQRPDECAPSIRKYFSISARKVSDTIKKRKSFLQLCPDSESDDKMKSLVDSIANGAGRCDAATLNASMTAYQGYGNARYVRNSAPSYCSAYGGNENVDQTNGTVARYVGEPGKGGHWVDPDQYDAALAEYNKRQASGNSSGGDNGWDSDGSNWQRMQR
SIO_010081: PJW04_RS22240
subclass of: SO_0000673
so part of: PJW04_RS22240
location: complement(20056..20658)
location: region:20056-20658:-1
so has part: feature:20056-20658:-1:exon

WP_046932441.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:20056-20658:-1:exon

PJW04_RS22245
type: Gene
subclass of: SO_0000704
RO_0002162: 442694
locus tag: PJW04_RS22245
old locus tag: PJW04_22245
so part of: sequence
location: complement(20688..21248)
location: region:20688-21248:-1
so has part: feature:20688-21248:-1:exon
subclass of: SO_0000010

79909925
type: Gene
SIO_000068: ncbigene

position:20688:-1
position: 20688
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:21248:-1
position: 21248
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:20688-21248:-1:exon

PJW04_RS22245
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 442694
locus tag: PJW04_RS22245
old locus tag: PJW04_22245
inference: COORDINATES: similar to AA sequence:RefSeq:WP_007968813.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: OmpA family protein
translation: MRALALVGVAFAVSACSSHPKPPTVSGRDRVPVNSPVAAQTLQQEAFPSAPVVVVQHQGGPQAVQRQQAPRAAARPLYPVVSVQFPWNSAQFRPTPAQVAHLRGLIAAGVAHVQVRGRTDNPNPSSGDERIARGRAEAAKDWLIGEGVPSGIIDLNFVSAGDYRSNNRLSDGRALNRRVDIEFISK
SIO_010081: PJW04_RS22245
subclass of: SO_0000673
so part of: PJW04_RS22245
location: complement(20688..21248)
location: region:20688-21248:-1
so has part: feature:20688-21248:-1:exon

WP_046932443.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:20688-21248:-1:exon

PJW04_RS22250
type: Gene
subclass of: SO_0000704
RO_0002162: 442694
locus tag: PJW04_RS22250
old locus tag: PJW04_22250
so part of: sequence
location: complement(21466..23145)
location: region:21466-23145:-1
so has part: feature:21466-23145:-1:exon
subclass of: SO_0000010

79909926
type: Gene
SIO_000068: ncbigene

position:21466:-1
position: 21466
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:23145:-1
position: 23145
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:21466-23145:-1:exon

PJW04_RS22250
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 442694
locus tag: PJW04_RS22250
old locus tag: PJW04_22250
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012329497.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: LPD7 domain-containing protein
translation: MADESTNAGVPAESAMPGYGVMMIDDKPITAVRFDKREVDGETAYDLSFRLNGKQVVRIKGVNEVGLTEAVGQRNALRISEAEATKGSLSGEDLAFSHGLTPKEIERRAPANEDRAQEATEVNTIREVKGNELESVDVAEALAMAAKLRKRDRDEYERNAGIDGVDRDLSKLQGRADREMIAVKELDKEADRLERVEVLEQRAGLAPQPVEAEHDVVEAEKNRRIQLMEQVNAQFNTSGPRHYFKDQPGRIAFRDVGDRLKTASNDQRVARAMVMMADAKGWKMVHLDGHPEFRQAGWMEASLRGMASTGYKPTERDLEALAAEQERRMGNSVSRGTERVQERSREPSPSATAEKSADGAQKPSEAISAPEKPRSAGGAPARSLAVHEGIMLAHGAAPYQNDPAEKMSYFVKLRTETGERTIWGKDLDRAVGESKLNPGDAVRLEFKGNQPVTVEALTRDDKGKVIGSETINTHRNTWEAHKGDREKVITAIAAKVMEAKVKDPQAREKVMAEIGRVVSEKSKAGTLPPVMMYDKAAPQRVPEQERTSPVVQRNAERTR
SIO_010081: PJW04_RS22250
subclass of: SO_0000673
so part of: PJW04_RS22250
location: complement(21466..23145)
location: region:21466-23145:-1
so has part: feature:21466-23145:-1:exon

WP_046932445.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:21466-23145:-1:exon

PJW04_RS22255
type: Gene
subclass of: SO_0000704
RO_0002162: 442694
locus tag: PJW04_RS22255
old locus tag: PJW04_22255
so part of: sequence
location: complement(23158..23784)
location: region:23158-23784:-1
so has part: feature:23158-23784:-1:exon
subclass of: SO_0000010

79909927
type: Gene
SIO_000068: ncbigene

position:23158:-1
position: 23158
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:23784:-1
position: 23784
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:23158-23784:-1:exon

PJW04_RS22255
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 442694
locus tag: PJW04_RS22255
old locus tag: PJW04_22255
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017160641.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MSNDTSNASTNQSKAEDRIKPTDIPREIRATVAEKLGKEADVYPAKSDSKNGYKGPVIHADKDFIVQAIGKGHRSAIVHLRNDVEFQGPKLQSRDQNNDLVNRNIQVHYRDGQAKAYPWNPERAAENQAQTQRKAVDPVEAAKEYAQTAFKTAKQRDAFVAHVQGVQALAADMAKAPTAPVQEGAKTARSIAVPAKGQDKAHAPSLER
SIO_010081: PJW04_RS22255
subclass of: SO_0000673
so part of: PJW04_RS22255
location: complement(23158..23784)
location: region:23158-23784:-1
so has part: feature:23158-23784:-1:exon

WP_017160641.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:23158-23784:-1:exon

PJW04_RS22260
type: Gene
subclass of: SO_0000704
RO_0002162: 442694
locus tag: PJW04_RS22260
old locus tag: PJW04_22260
so part of: sequence
location: complement(23878..25728)
location: region:23878-25728:-1
so has part: feature:23878-25728:-1:exon
subclass of: SO_0000010

79909928
type: Gene
SIO_000068: ncbigene

position:23878:-1
position: 23878
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:25728:-1
position: 25728
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:23878-25728:-1:exon

PJW04_RS22260
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 442694
locus tag: PJW04_RS22260
old locus tag: PJW04_22260
inference: COORDINATES: protein motif:HMM:NF014581.2
GO function: GO:0003735 - structural constituent of ribosome [Evidence IEA]
GO process: GO:0006412 - translation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ribosomal protein L7/L12
translation: MLNSAGEEQAQTVKVIMDLKRVDKAEAEALCDEIPFAVAENVPAAEIEAIEEQLKDCGAEYETERRLEPIVQWDGVGLPPLSSECVDALNRFVTTSDNTLSSIMSTFNAPLTLWASPIFDAATAANDFDLREVRRKRMSIYIGIPAAKLDSARLIMNMLFSQLVKLNLDVQLNATPDVKYHCMMLMDEFTAPGRIGIIAKSNAYMASYGLRLVTIIQSAGQLEADIPMGYGRDLARTLVTNHACQIFYTPREQRDANDYSEALGYYTFKSTGRSRQLGRSGGSESESDQKRPLMMPQELKEMSQREQIINLENTKAIKCTKIRYYEDYVFLDRLAEVDPSLLTRNFLGMRRKPTQRELERSWGSWKLAAPVPTIDFDLHDAIVQSRVREVTPDDIAGGIDLRKLAMDTSKIRDLAAGQELPPEQVQGIVADFFDALDAASQPSAEDIGDEDAVSDEELARLDAEAAAETDNDDGDGDGDGDRAAHAAEPPAAVAAAPAAAIAPIVVKPVAQPEPPAEPAPVDAVDDLAHEGDHSEAVAEDDVDADAEGNDVPELDEDDEARLYDELPDLSDFDGDTEVVHPDDEVLEDDDAAPMPAAAPTKPILDLSILDSPIERK
SIO_010081: PJW04_RS22260
subclass of: SO_0000673
so part of: PJW04_RS22260
location: complement(23878..25728)
location: region:23878-25728:-1
so has part: feature:23878-25728:-1:exon

WP_271412326.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:23878-25728:-1:exon

PJW04_RS22265
type: Gene
subclass of: SO_0000704
RO_0002162: 442694
locus tag: PJW04_RS22265
old locus tag: PJW04_22265
pseudo: true
so part of: sequence
location: complement(<25774..26343)
location: region:25774-26343:-1
so has part: feature:25774-26343:-1:exon
subclass of: SO_0000010

79909929
type: Gene
SIO_000068: ncbigene

position:25774:-1
position: 25774
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

position:26343:-1
position: 26343
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:25774-26343:-1:exon

PJW04_RS22265
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 442694
locus tag: PJW04_RS22265
old locus tag: PJW04_22265
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012431262.1
GO component: GO:0016020 - membrane [Evidence IEA]
note: incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: type IV secretory system conjugative DNA transfer family protein
SIO_010081: PJW04_RS22265
subclass of: SO_0000673
so part of: PJW04_RS22265
location: complement(<25774..26343)
location: region:25774-26343:-1
so has part: feature:25774-26343:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:25774-26343:-1:exon

PJW04_RS22270
type: Gene
subclass of: SO_0000704
RO_0002162: 442694
gene: virB11
locus tag: PJW04_RS22270
old locus tag: PJW04_22270
so part of: sequence
location: complement(26807..27880)
location: region:26807-27880:-1
so has part: feature:26807-27880:-1:exon
subclass of: SO_0000010

79909930
type: Gene
SIO_000068: ncbigene

position:26807:-1
position: 26807
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:27880:-1
position: 27880
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:26807-27880:-1:exon

PJW04_RS22270
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 442694
gene: virB11
locus tag: PJW04_RS22270
old locus tag: PJW04_22270
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012329494.1
GO component: GO:0043684 - type IV secretion system complex [Evidence IEA]
GO process: GO:0044097 - secretion by the type IV secretion system [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: P-type DNA transfer ATPase VirB11
translation: MSRTVENETGGVGFDRASSVRHLMEPLRPWMSDSSITEICVNRPGEVFIERESHWERHEEPGLTYAHLESLGTAIARYGNDTLDDAKPILSGILPDGERVQIVRPDACEHGTYSYTIRKPSLSRRNLGDYKRQGFFKHIKPVSTGLTSAERELLELRSTGDTLGFLRRAVQLDKVIVVAGETGSGKTTFMKALMQEIPRNQRLITIEDTPELFLPDHPNHVHLFYKSEANEEDGAIVTPASLLKSCLRMKPTRILLAELRSGETYDFLNVAASGHRGSITSVHAGSCDLAFERLALMVLQNRQGRQLPYPVIRRLLHLVVDVVVHITNDTDEGGFGRNITELWYDPGAKRALGKIEA
SIO_010081: PJW04_RS22270
subclass of: SO_0000673
so part of: PJW04_RS22270
location: complement(26807..27880)
location: region:26807-27880:-1
so has part: feature:26807-27880:-1:exon

WP_046932450.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:26807-27880:-1:exon

PJW04_RS22275
type: Gene
subclass of: SO_0000704
RO_0002162: 442694
gene: virB10
locus tag: PJW04_RS22275
old locus tag: PJW04_22275
so part of: sequence
location: complement(27906..29039)
location: region:27906-29039:-1
so has part: feature:27906-29039:-1:exon
subclass of: SO_0000010

79909931
type: Gene
SIO_000068: ncbigene

position:27906:-1
position: 27906
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:29039:-1
position: 29039
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:27906-29039:-1:exon

PJW04_RS22275
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 442694
gene: virB10
locus tag: PJW04_RS22275
old locus tag: PJW04_22275
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006257761.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: type IV secretion system protein VirB10
translation: MSEANTQPELAALPGERGMPSVNDSQRGRGMKVAFVIGVIVILMALVSLALLKYTGKKSAAATKKASMEAPALPARSFTAPPASPTPPAPAEAVPGVQPTATAPSVPGSATGEEARPPAKLDKSASSLMVVSDDAASGGGASGAQSAAGAGARLGLEPSGTDGGGPMASLLSGTKTDARKAGMIGNRNFILAKGSSIDCALQTRLDSTVPGMTACVVTRNIFSDNGKVLLIERGSTVTGEYQSNMRQGMARIYVLWTRVKTPNGVVVNLDSPGADALGGAGLPGYVDNHFWKRFGGALMLSLVDDTARFATQGNGSSSGSNQFNFNSTGEASSNMAAEALKNTINIPPTLYKNQGEQIAIFIARDLDFSSVYDVQTQ
SIO_010081: PJW04_RS22275
subclass of: SO_0000673
so part of: PJW04_RS22275
location: complement(27906..29039)
location: region:27906-29039:-1
so has part: feature:27906-29039:-1:exon

WP_029220872.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:27906-29039:-1:exon

PJW04_RS22280
type: Gene
subclass of: SO_0000704
RO_0002162: 442694
gene: virB9
locus tag: PJW04_RS22280
old locus tag: PJW04_22280
so part of: sequence
location: complement(29039..29917)
location: region:29039-29917:-1
so has part: feature:29039-29917:-1:exon
subclass of: SO_0000010

79909932
type: Gene
SIO_000068: ncbigene

position:29917:-1
position: 29917
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:29039-29917:-1:exon

PJW04_RS22280
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 442694
gene: virB9
locus tag: PJW04_RS22280
old locus tag: PJW04_22280
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010363027.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: P-type conjugative transfer protein VirB9
translation: MKRLYLTLAAVMVSVPAFAMDVPSSSRFDNRIQYVNYNAGDVVLVRALPGLGVRIVFAPGENIVDVGTGFLQGWEFRKSGNILFLKPKSIKTGGNDGQVMAPEAGKWNTNLMVTTDQRLYDFDLQLLPGSNDGAPARNQRVAYRVEFRYPADEARAKARQADKKAAEARLAAKPAPMNWHYSMQVGKDSEAIAPSMAYDDGRFTYLRFPNNRDFPTVFLVAGDKSESIVNANVDPSAPDILVVHRVAREMVLRLGSAVVGIYNDSYNMDGVPTNTGTTVPGVERVIKSGEVK
SIO_010081: PJW04_RS22280
subclass of: SO_0000673
so part of: PJW04_RS22280
location: complement(29039..29917)
location: region:29039-29917:-1
so has part: feature:29039-29917:-1:exon

WP_046932455.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:29039-29917:-1:exon

PJW04_RS22285
type: Gene
subclass of: SO_0000704
RO_0002162: 442694
locus tag: PJW04_RS22285
old locus tag: PJW04_22285
so part of: sequence
location: complement(29914..30630)
location: region:29914-30630:-1
so has part: feature:29914-30630:-1:exon
subclass of: SO_0000010

79909933
type: Gene
SIO_000068: ncbigene

position:29914:-1
position: 29914
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:30630:-1
position: 30630
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:29914-30630:-1:exon

PJW04_RS22285
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 442694
locus tag: PJW04_RS22285
old locus tag: PJW04_22285
inference: COORDINATES: similar to AA sequence:RefSeq:WP_007968805.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: virB8 family protein
translation: MSQSADGAHTQVTPEDSPHYAQAIGWEASRTLALEQSERRAWRVAGAFGVAFVLMAIGIAVMAPLKESIPYVIRVDSATGVPDLVTALDSKGVGYDEAMDRYWLAQFVRARETYDWYTLQKDYDTVGLLSAPNVAKQYGELFTGDNALDKKFGSQVRATVEIVSVVPNGDGVGTVRFIKTTKRAEETGRGQVTRWIATIAYKYQNPSVLKESARLTNPLGFQVTSYRADPELTTEGAR
SIO_010081: PJW04_RS22285
subclass of: SO_0000673
so part of: PJW04_RS22285
location: complement(29914..30630)
location: region:29914-30630:-1
so has part: feature:29914-30630:-1:exon

WP_234714347.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:29914-30630:-1:exon

PJW04_RS22290
type: Gene
subclass of: SO_0000704
RO_0002162: 442694
locus tag: PJW04_RS22290
old locus tag: PJW04_22290
so part of: sequence
location: complement(30672..30842)
location: region:30672-30842:-1
so has part: feature:30672-30842:-1:exon
subclass of: SO_0000010

79909934
type: Gene
SIO_000068: ncbigene

position:30672:-1
position: 30672
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:30842:-1
position: 30842
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:30672-30842:-1:exon

PJW04_RS22290
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 442694
locus tag: PJW04_RS22290
old locus tag: PJW04_22290
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015462652.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MKQCITLLCLVAMLAGCASNAAVVPALKGRARVPVNKQVPSQPPVTQQPTSSAQGE
SIO_010081: PJW04_RS22290
subclass of: SO_0000673
so part of: PJW04_RS22290
location: complement(30672..30842)
location: region:30672-30842:-1
so has part: feature:30672-30842:-1:exon

WP_010363023.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:30672-30842:-1:exon

PJW04_RS22295
type: Gene
subclass of: SO_0000704
RO_0002162: 442694
locus tag: PJW04_RS22295
old locus tag: PJW04_22295
so part of: sequence
location: complement(30967..32064)
location: region:30967-32064:-1
so has part: feature:30967-32064:-1:exon
subclass of: SO_0000010

79909935
type: Gene
SIO_000068: ncbigene

position:30967:-1
position: 30967
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:32064:-1
position: 32064
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:30967-32064:-1:exon

PJW04_RS22295
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 442694
locus tag: PJW04_RS22295
old locus tag: PJW04_22295
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010363021.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: type IV secretion system protein
translation: MDVVLFQFIGETFNNALDSYATTVASSVISAITATAVLGGTLYYAVMGMLMAIGRVDGPFSQFVVSCIKFTLIAAIALNVGTYGSMVIDSVRGMETGLADAFAGNSGAKSASIYQTIDKAVQDGWDIAAVLYERGNNRGWTEILLGLSEIGLGMTVALATIVIAMPAGAMIIGSHVVLSLLLGIGPLFVLAIGWGPVKGYFDRWFGQVMTGVMQIALVSAVLAIALKLFTFTVAKVDVDSATQSTLFAVLELFVLTLVMLYLVYRAYEIGGTLGGGMSANAITLGAMAARAASIAGAPIAAGRAIGGAVNPMSTRRDLESGMMVSAGRMNHLVAGNTMWNPSYRQHVLDNVGKNWGRARGGSISN
SIO_010081: PJW04_RS22295
subclass of: SO_0000673
so part of: PJW04_RS22295
location: complement(30967..32064)
location: region:30967-32064:-1
so has part: feature:30967-32064:-1:exon

WP_046735685.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:30967-32064:-1:exon

PJW04_RS22300
type: Gene
subclass of: SO_0000704
RO_0002162: 442694
locus tag: PJW04_RS22300
old locus tag: PJW04_22300
so part of: sequence
location: complement(32065..32340)
location: region:32065-32340:-1
so has part: feature:32065-32340:-1:exon
subclass of: SO_0000010

79909936
type: Gene
SIO_000068: ncbigene

position:32065:-1
position: 32065
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:32340:-1
position: 32340
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:32065-32340:-1:exon

PJW04_RS22300
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 442694
locus tag: PJW04_RS22300
old locus tag: PJW04_22300
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012329488.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: EexN family lipoprotein
translation: MKRVAYTTLLTFVAALSGCKDEQPVQTVTWYKEHAPERATMLADCRANAGQAAASANCINAEKADAETETAKRGHLQLDAGEFAKELKGSK
SIO_010081: PJW04_RS22300
subclass of: SO_0000673
so part of: PJW04_RS22300
location: complement(32065..32340)
location: region:32065-32340:-1
so has part: feature:32065-32340:-1:exon

WP_017160589.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:32065-32340:-1:exon

PJW04_RS22305
type: Gene
subclass of: SO_0000704
RO_0002162: 442694
gene: virB5
locus tag: PJW04_RS22305
old locus tag: PJW04_22305
so part of: sequence
location: complement(32390..33100)
location: region:32390-33100:-1
so has part: feature:32390-33100:-1:exon
subclass of: SO_0000010

79909937
type: Gene
SIO_000068: ncbigene

position:32390:-1
position: 32390
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:33100:-1
position: 33100
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:32390-33100:-1:exon

PJW04_RS22305
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 442694
gene: virB5
locus tag: PJW04_RS22305
old locus tag: PJW04_22305
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012329487.1
GO component: GO:0043684 - type IV secretion system complex [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: P-type DNA transfer protein VirB5
translation: MKKYALILAATLALSGTAFAGVPVTVIADVPAITNQIETMAKWKAQYDQMVSQINQMQKQYDAVTGPRGLGQIMNNPALRDYLPSDWQKVYDSVRTGGYNGLSGSAAAIHDANKVFDACGRMAAGAQRTACEAAAVKPAQDKAFAGEAYAAAKSRLDQINSLMGQINQTQDPKAIAELQGRIASEQAMIANEQTKLQLFQMMAQADEKLQEQRQREINAKQLARRGYLDLQPLTFN
SIO_010081: PJW04_RS22305
subclass of: SO_0000673
so part of: PJW04_RS22305
location: complement(32390..33100)
location: region:32390-33100:-1
so has part: feature:32390-33100:-1:exon

WP_046932459.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:32390-33100:-1:exon

PJW04_RS22310
type: Gene
subclass of: SO_0000704
RO_0002162: 442694
locus tag: PJW04_RS22310
old locus tag: PJW04_22310
so part of: sequence
location: complement(33225..33341)
location: region:33225-33341:-1
so has part: feature:33225-33341:-1:exon
subclass of: SO_0000010

79909938
type: Gene
SIO_000068: ncbigene

position:33225:-1
position: 33225
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:33341:-1
position: 33341
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:33225-33341:-1:exon

PJW04_RS22310
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 442694
locus tag: PJW04_RS22310
old locus tag: PJW04_22310
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015462656.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MNQQVATKIYLPNPEADYRQYLDGFKVTEDEYKIIKVD
SIO_010081: PJW04_RS22310
subclass of: SO_0000673
so part of: PJW04_RS22310
location: complement(33225..33341)
location: region:33225-33341:-1
so has part: feature:33225-33341:-1:exon

WP_017160586.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:33225-33341:-1:exon

PJW04_RS22315
type: Gene
subclass of: SO_0000704
RO_0002162: 442694
locus tag: PJW04_RS22315
old locus tag: PJW04_22315
so part of: sequence
location: complement(33354..35843)
location: region:33354-35843:-1
so has part: feature:33354-35843:-1:exon
subclass of: SO_0000010

79909939
type: Gene
SIO_000068: ncbigene

position:33354:-1
position: 33354
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:35843:-1
position: 35843
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:33354-35843:-1:exon

PJW04_RS22315
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 442694
locus tag: PJW04_RS22315
old locus tag: PJW04_22315
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010363013.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: VirB4 family type IV secretion/conjugal transfer ATPase
translation: MNAQARYQQQLNGERSISPFIPYSSQVSPDTIVTLEGDYVRTWRLAGLAWETADPEELLQRKEELNTLYRSIASEHVAMWTHILHRKTSDRLVSHFDNEFCRQLDEKYYASFTGYKMMANELYVTLVYRPHPSRIGKLFSKASRRSHAEIIADQRRALRRLDELASQVEASMRRYGGDERRGIEVLRTYDKGGALHSQQLEFLNYLLTGESQPVRVPQAPLNEYLGNAWVFAGTETIEIRTPVSTRFARCIDFKDYPENTEPGILNMLMYKGFEYVVTQSFSFMPKRDGVDFLDRQEKRLRNTEDGSVSQLVAMAEAKDSLINGEFAMGEYHFSMMVFGDSMDSVRSNTTEAMTTLQNEGFLAALVNTATDAAFYAQLPCNFRFRPRIAGLTSQNFACLAGFHNFRAGKRDGNPWGQALTLLKTPSGQPAYLNFHFSKGDEDNYDQKLLGNTRVIGQSGSGKTVLLNFCMCQAQKYKHNAPMGLCFIFFDKDQGAKATILASGGKYLAVRNGQPTGFNPLQMEPTEANILFLQRLVRSLVSSGGNRVTTEDERRIEHAVRTVMSMPKALRRLSTVLQNITEGGDKQDRENSVAKRLAKWCADDGYGKTGSLAWALDCAHDQIDFTTHTTYGFDGTDFLDNDDVRTPISMYLLHRMESVIDGRRFIYWMDEAWKWVDDDAFSDFAGNKQLTIRKQNGLGVFATQMPSSLLKSKIASQLVQQVATEIYLPNPKADYHEYVDGFKVTEDEYKIIRSMSEDSRLMIVKQGHQSMICRLDLGGMGDELAILSGSSDNNELLDEIIAEVGDDPSQWLPVFHQRRKARVVASKKSN
SIO_010081: PJW04_RS22315
subclass of: SO_0000673
so part of: PJW04_RS22315
location: complement(33354..35843)
location: region:33354-35843:-1
so has part: feature:33354-35843:-1:exon

WP_046932463.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:33354-35843:-1:exon

PJW04_RS22320
type: Gene
subclass of: SO_0000704
RO_0002162: 442694
locus tag: PJW04_RS22320
old locus tag: PJW04_22320
so part of: sequence
location: complement(35849..36190)
location: region:35849-36190:-1
so has part: feature:35849-36190:-1:exon
subclass of: SO_0000010

79909940
type: Gene
SIO_000068: ncbigene

position:35849:-1
position: 35849
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:36190:-1
position: 36190
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:35849-36190:-1:exon

PJW04_RS22320
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 442694
locus tag: PJW04_RS22320
old locus tag: PJW04_22320
inference: COORDINATES: similar to AA sequence:RefSeq:WP_007968798.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: type IV secretion system protein VirB3
translation: MATGSGSAGSRRATYTKDPLFKGCTRPAMIMGVPVVPFVIVGGSLMLVTIWTSIFCIVLVPVAIMVMRHITKSDDQQFRLLWLKILFRLINYNRNGSFWRSSAWSPVAFKKRK
SIO_010081: PJW04_RS22320
subclass of: SO_0000673
so part of: PJW04_RS22320
location: complement(35849..36190)
location: region:35849-36190:-1
so has part: feature:35849-36190:-1:exon

WP_007968798.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:35849-36190:-1:exon

PJW04_RS22325
type: Gene
subclass of: SO_0000704
RO_0002162: 442694
locus tag: PJW04_RS22325
old locus tag: PJW04_22325
so part of: sequence
location: complement(36203..36514)
location: region:36203-36514:-1
so has part: feature:36203-36514:-1:exon
subclass of: SO_0000010

79909941
type: Gene
SIO_000068: ncbigene

position:36203:-1
position: 36203
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:36514:-1
position: 36514
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:36203-36514:-1:exon

PJW04_RS22325
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 442694
locus tag: PJW04_RS22325
old locus tag: PJW04_22325
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017160625.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: TrbC/VirB2 family protein
translation: MKKLAFIGAKSPSRTALLSVAALAAAMVIAGPAAAEGLEKVNQGVENVLSVLNVISVSIVTIAVIVAGYKMAFAHARFIDVVPILGGGILIGAAPQLARFLIN
SIO_010081: PJW04_RS22325
subclass of: SO_0000673
so part of: PJW04_RS22325
location: complement(36203..36514)
location: region:36203-36514:-1
so has part: feature:36203-36514:-1:exon

WP_017160625.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:36203-36514:-1:exon

PJW04_RS22330
type: Gene
subclass of: SO_0000704
RO_0002162: 442694
locus tag: PJW04_RS22330
old locus tag: PJW04_22330
so part of: sequence
location: complement(36672..39044)
location: region:36672-39044:-1
so has part: feature:36672-39044:-1:exon
subclass of: SO_0000010

79909942
type: Gene
SIO_000068: ncbigene

position:36672:-1
position: 36672
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:39044:-1
position: 39044
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:36672-39044:-1:exon

PJW04_RS22330
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 442694
locus tag: PJW04_RS22330
old locus tag: PJW04_22330
EC number: 5.6.2.-
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010363005.1
GO function: GO:0003677 - DNA binding [Evidence IEA]; GO:0003916 - DNA topoisomerase activity [Evidence IEA]
GO process: GO:0006265 - DNA topological change [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DNA topoisomerase
translation: MKLMVVESPNKVASIQGYLGDDWKVVASVGHIRDLPQREFGISKPDFSLQYEYIPPQKVGDRTFPGAAERVARIKREVAKAEVVYLATDPDREGEAISWHLKEALQLGEGDYERVTFTEITPKAIQASLRAARRIDMDLVHAQEGRRALDRFVGYMVSPLLSDMLGMSLSAGRVQSVAVRLVVELERRIAAFKSTKHFGAVVMFDAGGGAKWSAQWDTKPYVTEDSPYVLDAALAAKASQSRQFVVLEAKTEEKSERPPSPLSTLGMLRAASTVLKMSSAATTKAAQKLFEDGHITYIRTDSVNLSPDAADKVRSFAASQGMALSPDVRRWKEKASAQGGHADAVRPTHIEVEDAGADEAQRALYRLIRLRTLVSQMADARYTVNTVRLRATDRDGFEYVARGRKMIDAGWRALLERDPDDEENSDEDAAKDGQVPRLAVGGDLRAIDGKVLDKKTEPPRRFTEATLLQKLEDEGVGRPATFAAIMTNVLGRSYVELDKKRYLLPTEIGELVVDNLLRGQFGFMELGFTRELEVQLDAIAEGKASYRDVVEPAYTQLNEELARIAVSGEFTPRFKCPKCGTGMRRYAKPGKSPFWRCTADAETCGHYMDDDKGKPVERAAHPCPRCGETLRRFKRKSGGGLVWVCPAEACETFLDDVGGKPVALHTCSKCSAPLRRYQKKDRETGKPTGAFGWFCTDTENCKTFMDDDKGRPVAIKKAPCPKCGKAMYRRKGDHGWWWGCSGYREGCKTIMDDDKGKPVPRAAKGATKSTSSPAKAKAKAKPAAKPKLRR
SIO_010081: PJW04_RS22330
subclass of: SO_0000673
so part of: PJW04_RS22330
location: complement(36672..39044)
location: region:36672-39044:-1
so has part: feature:36672-39044:-1:exon

WP_046932464.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:36672-39044:-1:exon

PJW04_RS22335
type: Gene
subclass of: SO_0000704
RO_0002162: 442694
locus tag: PJW04_RS22335
old locus tag: PJW04_22335
so part of: sequence
location: complement(39070..39852)
location: region:39070-39852:-1
so has part: feature:39070-39852:-1:exon
subclass of: SO_0000010

79909943
type: Gene
SIO_000068: ncbigene

position:39070:-1
position: 39070
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:39852:-1
position: 39852
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:39070-39852:-1:exon

PJW04_RS22335
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 442694
locus tag: PJW04_RS22335
old locus tag: PJW04_22335
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010363003.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: lytic transglycosylase domain-containing protein
translation: MLEFMDLAQQCAPTVAPQTMAALVQVESGFNPYAIGVVDGRLARQPVNLEEAVATAQQLEAGGWNFSLGIAQVNRHNLPKYKLTYAQAFDACANLRAGSKILQDCYARASAKLASEKDPLHAAFSCYYSGNFSRGFRPDKAGQPSYVQKVLASAGVVPKAIPVVPAIGARTSPNARVPAAEPAQPGDATAAVPLTAAPAPSEPAEPADHASVLVDLDPPKRSALPQPPTAPVADDAVKLKAQQPSASRTPAADADDFSVF
SIO_010081: PJW04_RS22335
subclass of: SO_0000673
so part of: PJW04_RS22335
location: complement(39070..39852)
location: region:39070-39852:-1
so has part: feature:39070-39852:-1:exon

WP_052756078.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:39070-39852:-1:exon

PJW04_RS22340
type: Gene
subclass of: SO_0000704
RO_0002162: 442694
locus tag: PJW04_RS22340
old locus tag: PJW04_22340
so part of: sequence
location: complement(39926..40402)
location: region:39926-40402:-1
so has part: feature:39926-40402:-1:exon
subclass of: SO_0000010

79909944
type: Gene
SIO_000068: ncbigene

position:39926:-1
position: 39926
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:40402:-1
position: 40402
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:39926-40402:-1:exon

PJW04_RS22340
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 442694
locus tag: PJW04_RS22340
old locus tag: PJW04_22340
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017115798.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MNDRDRDRDRLMGAALPPVYPPCTLSNSILESDLELAAQYNIVNHIKVFETPSGFYVTAKFADRKGDFLKQIKPMGVPEAYYVLAQLLGEPGKEWYLTTRRNRDRPRMFKDLKRLNDLLLEKDPLDGFTLLRNQGLPGEARPMAVVGDMPANAKPAKI
SIO_010081: PJW04_RS22340
subclass of: SO_0000673
so part of: PJW04_RS22340
location: complement(39926..40402)
location: region:39926-40402:-1
so has part: feature:39926-40402:-1:exon

WP_046932469.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:39926-40402:-1:exon

PJW04_RS22345
type: Gene
subclass of: SO_0000704
RO_0002162: 442694
locus tag: PJW04_RS22345
old locus tag: PJW04_22345
so part of: sequence
location: 41903..42316
location: region:41903-42316:1
so has part: feature:41903-42316:1:exon
subclass of: SO_0000010

79909945
type: Gene
SIO_000068: ncbigene

position:41903:1
position: 41903
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:42316:1
position: 42316
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:41903-42316:1:exon

PJW04_RS22345
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 442694
locus tag: PJW04_RS22345
old locus tag: PJW04_22345
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012329479.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MNLNTSAPKRDTQDQKPAPASSKAMWIDAKDIKPGDVLLGMFNGVAARRDNVQEVRAGWWCRVYVLANGGYDVMTYRADARVYIERGPLFHIEAVSKHSDERLRLTRYPMSRQQCETLMGTISRHPSRRIELVEVQA
SIO_010081: PJW04_RS22345
subclass of: SO_0000673
so part of: PJW04_RS22345
location: 41903..42316
location: region:41903-42316:1
so has part: feature:41903-42316:1:exon

WP_223293198.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:41903-42316:1:exon

PJW04_RS22350
type: Gene
subclass of: SO_0000704
RO_0002162: 442694
locus tag: PJW04_RS22350
old locus tag: PJW04_22350
so part of: sequence
location: 42313..42954
location: region:42313-42954:1
so has part: feature:42313-42954:1:exon
subclass of: SO_0000010

79909946
type: Gene
SIO_000068: ncbigene

position:42313:1
position: 42313
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:42954:1
position: 42954
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:42313-42954:1:exon

PJW04_RS22350
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 442694
locus tag: PJW04_RS22350
old locus tag: PJW04_22350
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010368847.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MSIFDADDLVSSTFAPVITIRPEIRTMNRPKKTRYIPANAEAREFPQAGVVAYCYGNGVRYALLAYKGRQIRAALNLAFTTAEQRDRHLTSYIERQAANENAKRERRETGHGLAVGDIVYETYGYEQTNVHFYEVTRVPSARSAVVCEIEAEKTEAGEKAMAGTAVPRPGVFKAGAMPRMHRAAYLHVLSGGAGHHGSLSKWDGRPKDYSSYY
SIO_010081: PJW04_RS22350
subclass of: SO_0000673
so part of: PJW04_RS22350
location: 42313..42954
location: region:42313-42954:1
so has part: feature:42313-42954:1:exon

WP_015462664.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:42313-42954:1:exon

PJW04_RS22355
type: Gene
subclass of: SO_0000704
RO_0002162: 442694
locus tag: PJW04_RS22355
old locus tag: PJW04_22355
so part of: sequence
location: 43097..43327
location: region:43097-43327:1
so has part: feature:43097-43327:1:exon
subclass of: SO_0000010

79909947
type: Gene
SIO_000068: ncbigene

position:43097:1
position: 43097
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:43327:1
position: 43327
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:43097-43327:1:exon

PJW04_RS22355
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 442694
locus tag: PJW04_RS22355
old locus tag: PJW04_22355
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010368838.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MNVKPIELAAILAGLRLLQRHDVLPADIDSILTDAGPRITESDIDALCERINAGDLVPAKAVSTLVKAARDTRSLS
SIO_010081: PJW04_RS22355
subclass of: SO_0000673
so part of: PJW04_RS22355
location: 43097..43327
location: region:43097-43327:1
so has part: feature:43097-43327:1:exon

WP_015462665.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:43097-43327:1:exon

PJW04_RS22360
type: Gene
subclass of: SO_0000704
RO_0002162: 442694
locus tag: PJW04_RS22360
old locus tag: PJW04_22360
so part of: sequence
location: 43371..43691
location: region:43371-43691:1
so has part: feature:43371-43691:1:exon
subclass of: SO_0000010

79909948
type: Gene
SIO_000068: ncbigene

position:43371:1
position: 43371
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:43691:1
position: 43691
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:43371-43691:1:exon

PJW04_RS22360
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 442694
locus tag: PJW04_RS22360
old locus tag: PJW04_22360
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010368836.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MSNYQQIHGFTAAGDERFRTFIAAHFAENPFIAAHYHGDPEEARRDCLSVLEDNLNGAGGPLTWGLLSPSSPGDLPHSFTVDLDELIIADVDNGDEDDADTAASAA
SIO_010081: PJW04_RS22360
subclass of: SO_0000673
so part of: PJW04_RS22360
location: 43371..43691
location: region:43371-43691:1
so has part: feature:43371-43691:1:exon

WP_015462666.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:43371-43691:1:exon

PJW04_RS22365
type: Gene
subclass of: SO_0000704
RO_0002162: 442694
locus tag: PJW04_RS22365
old locus tag: PJW04_22365
so part of: sequence
location: 43701..44015
location: region:43701-44015:1
so has part: feature:43701-44015:1:exon
subclass of: SO_0000010

79909949
type: Gene
SIO_000068: ncbigene

position:43701:1
position: 43701
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:44015:1
position: 44015
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:43701-44015:1:exon

PJW04_RS22365
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 442694
locus tag: PJW04_RS22365
old locus tag: PJW04_22365
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010368834.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MQQSMTLSQFRAAHAAGGFTGAQLVGVGGRFYVSAADRLGDSAILVRDADRAVRFFSSSETGLKLLRDVGFATITVELKNWAPDQGALKIIDNSPAQRRPATTP
SIO_010081: PJW04_RS22365
subclass of: SO_0000673
so part of: PJW04_RS22365
location: 43701..44015
location: region:43701-44015:1
so has part: feature:43701-44015:1:exon

WP_015462667.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:43701-44015:1:exon

PJW04_RS22370
type: Gene
subclass of: SO_0000704
RO_0002162: 442694
locus tag: PJW04_RS22370
old locus tag: PJW04_22370
so part of: sequence
location: 44046..44306
location: region:44046-44306:1
so has part: feature:44046-44306:1:exon
subclass of: SO_0000010

79909950
type: Gene
SIO_000068: ncbigene

position:44046:1
position: 44046
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:44306:1
position: 44306
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:44046-44306:1:exon

PJW04_RS22370
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 442694
locus tag: PJW04_RS22370
old locus tag: PJW04_22370
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010368832.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MKTEHKQFAGSTAVTLALISPLPQAVCVGQIKQAAAIAATIAISAMVSVAFLAAGHHRQQHRPVPGQQKIDALREQYRTNAEPQGT
SIO_010081: PJW04_RS22370
subclass of: SO_0000673
so part of: PJW04_RS22370
location: 44046..44306
location: region:44046-44306:1
so has part: feature:44046-44306:1:exon

WP_015462668.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:44046-44306:1:exon

PJW04_RS22375
type: Gene
subclass of: SO_0000704
RO_0002162: 442694
locus tag: PJW04_RS22375
old locus tag: PJW04_22375
so part of: sequence
location: 44670..45104
location: region:44670-45104:1
so has part: feature:44670-45104:1:exon
subclass of: SO_0000010

79909951
type: Gene
SIO_000068: ncbigene

position:44670:1
position: 44670
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:45104:1
position: 45104
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:44670-45104:1:exon

PJW04_RS22375
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 442694
locus tag: PJW04_RS22375
old locus tag: PJW04_22375
inference: COORDINATES: protein motif:HMM:NF037437.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: antitoxin VbhA family protein
translation: MKDQLTGSDIKLEACRVAPAGDSPNQEQDMLEVNYTLRIDQNSRDRFNNAVKTKERHRNPSQVMRELMDAYADGRLVIEPSGPAKPSEDELRLRREAVEYAHGSVALEGFAVSRAAQDLAQRFMRGEISKEEFMAPSFDVVHGR
SIO_010081: PJW04_RS22375
subclass of: SO_0000673
so part of: PJW04_RS22375
location: 44670..45104
location: region:44670-45104:1
so has part: feature:44670-45104:1:exon

WP_271412324.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:44670-45104:1:exon

PJW04_RS22380
type: Gene
subclass of: SO_0000704
RO_0002162: 442694
locus tag: PJW04_RS22380
old locus tag: PJW04_22380
so part of: sequence
location: 45094..46068
location: region:45094-46068:1
so has part: feature:45094-46068:1:exon
subclass of: SO_0000010

79909952
type: Gene
SIO_000068: ncbigene

position:45094:1
position: 45094
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:46068:1
position: 46068
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:45094-46068:1:exon

PJW04_RS22380
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 442694
locus tag: PJW04_RS22380
old locus tag: PJW04_22380
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012329466.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: Fic family protein
translation: MVDKLDIAARRDELEGFYTFRRIVELRVAPVGGAFDVDHLKEINRRIFQDLPGLGFDDVTPGRFRDAVPAGVDWVKHRQLETANVTSHVCYSDMDAKAIGRLGETLGRADPERLRRMKTGPFVQELTSLYAELDYIHPFRDGNSRTLREFTRELAEASGFHLQWEYFGQNKGGRDALYVARDRSVNELALPNIKAEVTRRDVVFSMDQLEGNKDLAGLLKDAGHHLVRPARADAFQRLPEAEAVLAFPELKEAYATLRRADFYSATKVVNAPQLREQFVAGVRATIQEKLNAGETQGLGPAKPAEKSKSEKTKQPPRSTPDRER
SIO_010081: PJW04_RS22380
subclass of: SO_0000673
so part of: PJW04_RS22380
location: 45094..46068
location: region:45094-46068:1
so has part: feature:45094-46068:1:exon

WP_015462671.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:45094-46068:1:exon

PJW04_RS22385
type: Gene
subclass of: SO_0000704
RO_0002162: 442694
locus tag: PJW04_RS22385
old locus tag: PJW04_22385
so part of: sequence
location: 46209..46622
location: region:46209-46622:1
so has part: feature:46209-46622:1:exon
subclass of: SO_0000010

79909953
type: Gene
SIO_000068: ncbigene

position:46209:1
position: 46209
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:46622:1
position: 46622
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:46209-46622:1:exon

PJW04_RS22385
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 442694
locus tag: PJW04_RS22385
old locus tag: PJW04_22385
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017163243.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MNEEQEIAEAAGKRELYDAFWKESSDAIKPFREFWSKSGGTMREEAGKLDAVLGGRTPVSDQAVTDCRLAVMRLHQFAHAISELSSGSIAKIQNELCQRAMTDIVVRAMDAAKKAQRDMATIYQWVAAAEHPNTAQQ
SIO_010081: PJW04_RS22385
subclass of: SO_0000673
so part of: PJW04_RS22385
location: 46209..46622
location: region:46209-46622:1
so has part: feature:46209-46622:1:exon

WP_015462672.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:46209-46622:1:exon

PJW04_RS22390
type: Gene
subclass of: SO_0000704
RO_0002162: 442694
locus tag: PJW04_RS22390
old locus tag: PJW04_22390
pseudo: true
so part of: sequence
location: complement(46842..>47000)
location: region:46842-47000:-1
so has part: feature:46842-47000:-1:exon
subclass of: SO_0000010

79909954
type: Gene
SIO_000068: ncbigene

position:46842:-1
position: 46842
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:47000:-1
position: 47000
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:46842-47000:-1:exon

PJW04_RS22390
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 442694
locus tag: PJW04_RS22390
old locus tag: PJW04_22390
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012806129.1
note: incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: transposase
SIO_010081: PJW04_RS22390
subclass of: SO_0000673
so part of: PJW04_RS22390
location: complement(46842..>47000)
location: region:46842-47000:-1
so has part: feature:46842-47000:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:46842-47000:-1:exon

PJW04_RS22395
type: Gene
subclass of: SO_0000704
RO_0002162: 442694
locus tag: PJW04_RS22395
old locus tag: PJW04_22395
so part of: sequence
location: complement(47031..47576)
location: region:47031-47576:-1
so has part: feature:47031-47576:-1:exon
subclass of: SO_0000010

79909955
type: Gene
SIO_000068: ncbigene

position:47031:-1
position: 47031
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:47576:-1
position: 47576
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:47031-47576:-1:exon

PJW04_RS22395
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 442694
locus tag: PJW04_RS22395
old locus tag: PJW04_22395
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017170487.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MSAYHEFIQPFSHEELIRAFETEDLVGCVLRIHLHVEKLLVFALKSSINSQIAKVITSVPQNFSNKVQLAAAFGVPVEICLAVLDLNALRNKIGHNLGQLLAPQDVLQLATKIDAFRAAFFPEEPTVMASAMELSSTGSGKRQFGAGEAIWDFKIASGLLNVWMLRYWAQRGWLSKSTAGS
SIO_010081: PJW04_RS22395
subclass of: SO_0000673
so part of: PJW04_RS22395
location: complement(47031..47576)
location: region:47031-47576:-1
so has part: feature:47031-47576:-1:exon

WP_046932476.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:47031-47576:-1:exon

PJW04_RS22400
type: Gene
subclass of: SO_0000704
RO_0002162: 442694
locus tag: PJW04_RS22400
old locus tag: PJW04_22400
so part of: sequence
location: complement(47626..48021)
location: region:47626-48021:-1
so has part: feature:47626-48021:-1:exon
subclass of: SO_0000010

79909956
type: Gene
SIO_000068: ncbigene

position:47626:-1
position: 47626
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:48021:-1
position: 48021
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:47626-48021:-1:exon

PJW04_RS22400
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 442694
locus tag: PJW04_RS22400
old locus tag: PJW04_22400
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017172645.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: type II toxin-antitoxin system VapC family toxin
translation: MKVAVDTNVLVRAVVRDDPAQADVAAAVLTDAELIAVALPCLCEFVWVLLRVYGFQQADAASAIRALLAAANVEVNRPAVEAGLLVLDAGGDFADGVIAYEGNWLGGETFVSFDKKAVVLLTAQGQSTRLL
SIO_010081: PJW04_RS22400
subclass of: SO_0000673
so part of: PJW04_RS22400
location: complement(47626..48021)
location: region:47626-48021:-1
so has part: feature:47626-48021:-1:exon

WP_009602864.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:47626-48021:-1:exon

PJW04_RS22405
type: Gene
subclass of: SO_0000704
RO_0002162: 442694
locus tag: PJW04_RS22405
old locus tag: PJW04_22405
so part of: sequence
location: complement(48018..48269)
location: region:48018-48269:-1
so has part: feature:48018-48269:-1:exon
subclass of: SO_0000010

79909957
type: Gene
SIO_000068: ncbigene

position:48018:-1
position: 48018
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:48269:-1
position: 48269
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:48018-48269:-1:exon

PJW04_RS22405
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 442694
locus tag: PJW04_RS22405
old locus tag: PJW04_22405
inference: COORDINATES: similar to AA sequence:RefSeq:WP_019334760.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: AbrB/MazE/SpoVT family DNA-binding domain-containing protein
translation: MTTLTVTARGQVTFRKDVLQHLGIRPGDKIELNLLPDGRGVLKAARPAGTIASFVGLLAGRTQKVATIEEINEAAAQGWAGKQ
SIO_010081: PJW04_RS22405
subclass of: SO_0000673
so part of: PJW04_RS22405
location: complement(48018..48269)
location: region:48018-48269:-1
so has part: feature:48018-48269:-1:exon

WP_002804328.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:48018-48269:-1:exon

PJW04_RS22410
type: Gene
subclass of: SO_0000704
RO_0002162: 442694
locus tag: PJW04_RS22410
old locus tag: PJW04_22410
so part of: sequence
location: 48451..49017
location: region:48451-49017:1
so has part: feature:48451-49017:1:exon
subclass of: SO_0000010

79909958
type: Gene
SIO_000068: ncbigene

position:48451:1
position: 48451
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:49017:1
position: 49017
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:48451-49017:1:exon

PJW04_RS22410
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 442694
locus tag: PJW04_RS22410
old locus tag: PJW04_22410
inference: COORDINATES: similar to AA sequence:RefSeq:WP_009602860.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: recombinase family protein
translation: MVLIGYARVSTAEQDTALQTDALRKAGCERVFEDTASGAKADRPGLADALAYLRAGDVLAVWRLDRLGRSMPHLIETIAALEARGVGFRSLTESIDTTTPGGRLIFHVFGALGQFERDLIRERTKAGLIAAAARGRKGGRKPVVTADKLQRAREHIANGLNAREAAKRLKVSKTALYAALQSTSAADS
SIO_010081: PJW04_RS22410
subclass of: SO_0000673
so part of: PJW04_RS22410
location: 48451..49017
location: region:48451-49017:1
so has part: feature:48451-49017:1:exon

WP_046932484.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:48451-49017:1:exon

PJW04_RS22415
type: Gene
subclass of: SO_0000704
RO_0002162: 442694
locus tag: PJW04_RS22415
old locus tag: PJW04_22415
so part of: sequence
location: 49246..49896
location: region:49246-49896:1
so has part: feature:49246-49896:1:exon
subclass of: SO_0000010

79909959
type: Gene
SIO_000068: ncbigene

position:49246:1
position: 49246
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:49896:1
position: 49896
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:49246-49896:1:exon

PJW04_RS22415
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 442694
locus tag: PJW04_RS22415
old locus tag: PJW04_22415
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017113411.1
GO function: GO:0003677 - DNA binding [Evidence IEA]; GO:0000150 - DNA strand exchange activity [Evidence IEA]
GO process: GO:0006310 - DNA recombination [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: recombinase family protein
translation: MARAPAEPFKVARIYQRVSTDGQDLTRQAAIVQEAKAAGFYVAGVYREKASGARADRPELLRMIEDLQSGEVVIAEKIDRISRLPLAEAERLVASIRAKGARIAVPGVVDFSEVAAEAKGVAKVVLESMQDMLLRIALQIARDDYEDRRERQRQGIDLAKARDKYRGRPADQAIHARIVALRGRGETIVNTARLAGASVTTVKRVWAAHCAQGYGN
SIO_010081: PJW04_RS22415
subclass of: SO_0000673
so part of: PJW04_RS22415
location: 49246..49896
location: region:49246-49896:1
so has part: feature:49246-49896:1:exon

WP_046932486.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:49246-49896:1:exon

PJW04_RS22420
type: Gene
subclass of: SO_0000704
RO_0002162: 442694
locus tag: PJW04_RS22420
old locus tag: PJW04_22420
so part of: sequence
location: complement(50166..51185)
location: region:50166-51185:-1
so has part: feature:50166-51185:-1:exon
subclass of: SO_0000010

79909960
type: Gene
SIO_000068: ncbigene

position:50166:-1
position: 50166
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:51185:-1
position: 51185
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:50166-51185:-1:exon

PJW04_RS22420
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 442694
locus tag: PJW04_RS22420
old locus tag: PJW04_22420
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017160644.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MKLKRDARTLKAKAIASLKRGLEAFNNHDDNGRTEAVLLMFQHASEMLVKALLVQKGQDVFDEEKGTSIGIDKALTTAQSKGWITASQTGAIRVIDAMRNSAQHWMIVVPEDALYINARALITVLDEVLTTHFNDTLADNLPVRVLPLSTQALPDFLMLVNREYTQIRELLAPGRRARDEARGRITALLAMEAHVSEKVAVSKRDLYRIEEAIKEGTPLDQVFPRLMTLATNIEGEGPTIRVRFTKATGAPAVRFVSGDDPEGAAAIREIDLQKKYHWSRSELAKKLGLPTKKVKAIRDHLRIDENSAYVMFFEFGAQKHPRYSDNALRALQAAISTDL
SIO_010081: PJW04_RS22420
subclass of: SO_0000673
so part of: PJW04_RS22420
location: complement(50166..51185)
location: region:50166-51185:-1
so has part: feature:50166-51185:-1:exon

WP_017160644.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:50166-51185:-1:exon

PJW04_RS22425
type: Gene
subclass of: SO_0000704
RO_0002162: 442694
locus tag: PJW04_RS22425
old locus tag: PJW04_22425
so part of: sequence
location: 51250..51582
location: region:51250-51582:1
so has part: feature:51250-51582:1:exon
subclass of: SO_0000010

79909961
type: Gene
SIO_000068: ncbigene

position:51250:1
position: 51250
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:51582:1
position: 51582
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:51250-51582:1:exon

PJW04_RS22425
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 442694
locus tag: PJW04_RS22425
old locus tag: PJW04_22425
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017163772.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MVRVGQTEKQLTGQRGEPRVFASLDTAAAQLLALGVMVFEVLPANYVRAPKVYRRGRPAALKALAKLQRQAKPEAQAGQEAGRRGGHRAQLKLPGLPRTRKPARSAGADA
SIO_010081: PJW04_RS22425
subclass of: SO_0000673
so part of: PJW04_RS22425
location: 51250..51582
location: region:51250-51582:1
so has part: feature:51250-51582:1:exon

WP_223670423.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:51250-51582:1:exon

PJW04_RS22430
type: Gene
subclass of: SO_0000704
RO_0002162: 442694
locus tag: PJW04_RS22430
old locus tag: PJW04_22430
so part of: sequence
location: 51579..51755
location: region:51579-51755:1
so has part: feature:51579-51755:1:exon
subclass of: SO_0000010

79909962
type: Gene
SIO_000068: ncbigene

position:51579:1
position: 51579
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:51755:1
position: 51755
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:51579-51755:1:exon

PJW04_RS22430
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 442694
locus tag: PJW04_RS22430
old locus tag: PJW04_22430
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MSHRNDLAQVTAERDVLAGLVKQYEAPAADFQRGSATRGSADIRVKIAHKIGFHPLHQ
SIO_010081: PJW04_RS22430
subclass of: SO_0000673
so part of: PJW04_RS22430
location: 51579..51755
location: region:51579-51755:1
so has part: feature:51579-51755:1:exon

WP_223866248.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:51579-51755:1:exon

PJW04_RS22435
type: Gene
subclass of: SO_0000704
RO_0002162: 442694
locus tag: PJW04_RS22435
old locus tag: PJW04_22435
so part of: sequence
location: complement(51783..54746)
location: region:51783-54746:-1
so has part: feature:51783-54746:-1:exon
subclass of: SO_0000010

79909963
type: Gene
SIO_000068: ncbigene

position:51783:-1
position: 51783
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:54746:-1
position: 54746
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:51783-54746:-1:exon

PJW04_RS22435
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 442694
locus tag: PJW04_RS22435
old locus tag: PJW04_22435
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017159860.1
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: Tn3 family transposase
translation: MASIERTAYPQFKRNPVVRELVAAYTPTDAEVAFVAEYTRQPAHRLTLTILLKTFQRLGYFPVLDEVPPAVMRHIRSALKLRVQVKPANLANASRYRYYRRIRQFLQVRAYSDGGLKIAARAVYEAAAVMDNPADLINVAIEQLVRDRVELPAFSTLDRLTRRIRTLVNGRYFAQIEARLTIDEKQRLEGLLQVEQGRQKSPLHAIKRLPKRSSLQHFQELIDHIAELDELVGSEVHLAGIPEVKRKHFAAEARALDASELRKFRAAKRYAVLVCLIHRARVQTRDDLAEMFIKRMGNIHNRGREELERLRARYREKTEAIVATMSDVVRVLDHHRGDTEAGREIRHLINAHGGAQTLQADCNAIAAHSGDNHLPLLWPFYKSHRSTILRMVRRLDLASTTEDRSLIDAIELILTQERSRSHWLDEAVDLAFTTQLWRKTIVHRTEVGGEERIHRRLFEVCVFSSLANELKSGDVAVRGSETYADYREQLLPWEQCEPLLEDYCKHVGLPATAVGFVNALQSRLTQVAELTDQGYLENGQVVIGEDGIPVLKRSKAKEMSCGARALETAVLDRMRERSVIEILCDVAHWTRWPRHFGPLSGSDAKIEQPTERYVLTAFTYGCNLGPAQAARHLRGAVSAHMLSFVNRRHVDANKLAAACRDIINSYAGLQLPKCWGDGKSAAADGTKYDLYDQNLLASYHIRYGGYGGIAYHHVSDTYVALFSHFIPCGVWEAVYIIDGLLKNTSDIQPDTVHADTQGQSLPVFGLSHLLGIQLMPRIRNWREYKFFRPDEDIRYEYIDALFRDTVDWDLIETHWKDLMQVVLSIKTGKIAASTLMRKLGNYSRKNRLYQSFKALGSAVRTLFLLQYISNRELREQITASTNKVEAYNGFAKYFFFGGEGVIADNDPVEQEKAVQYNDLVSNAVIFYNVVEQTRIMTSLMRQGWKITREDVAFLSPYVTSHVKRFGDYLIDVEAVPEPYETELALAG
SIO_010081: PJW04_RS22435
subclass of: SO_0000673
so part of: PJW04_RS22435
location: complement(51783..54746)
location: region:51783-54746:-1
so has part: feature:51783-54746:-1:exon

WP_046932235.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:51783-54746:-1:exon

PJW04_RS22440
type: Gene
subclass of: SO_0000704
RO_0002162: 442694
locus tag: PJW04_RS22440
old locus tag: PJW04_22440
pseudo: true
so part of: sequence
location: complement(<54791..55723)
location: region:54791-55723:-1
so has part: feature:54791-55723:-1:exon
subclass of: SO_0000010

79909964
type: Gene
SIO_000068: ncbigene

position:54791:-1
position: 54791
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

position:55723:-1
position: 55723
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:54791-55723:-1:exon

PJW04_RS22440
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 442694
locus tag: PJW04_RS22440
old locus tag: PJW04_22440
inference: COORDINATES: similar to AA sequence:RefSeq:WP_007971051.1
note: incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: site-specific integrase
SIO_010081: PJW04_RS22440
subclass of: SO_0000673
so part of: PJW04_RS22440
location: complement(<54791..55723)
location: region:54791-55723:-1
so has part: feature:54791-55723:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:54791-55723:-1:exon

PJW04_RS22445
type: Gene
subclass of: SO_0000704
RO_0002162: 442694
locus tag: PJW04_RS22445
old locus tag: PJW04_22445
so part of: sequence
location: 55916..>56105
location: region:55916-56105:1
so has part: feature:55916-56105:1:exon
subclass of: SO_0000010

79909965
type: Gene
SIO_000068: ncbigene

position:55916:1
position: 55916
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:55916-56105:1:exon

PJW04_RS22445
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 442694
locus tag: PJW04_RS22445
old locus tag: PJW04_22445
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017157773.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DNA-binding protein
translation: MARSGLYKSDVQRARDRLRATGTHPSVDAVRVALGNTGSKTTIHRYLRELEEEEGQSVGAKMG
SIO_010081: PJW04_RS22445
subclass of: SO_0000673
so part of: PJW04_RS22445
location: 55916..>56105
location: region:55916-56105:1
so has part: feature:55916-56105:1:exon

WP_271412325.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:55916-56105:1:exon