Xanthomonas perforans strain GEV872 plasmid pGEV872.1.
type: Entry
definition: Xanthomonas perforans strain GEV872 plasmid pGEV872.1.
sequence version: NZ_CP116306.1
sequence date: 2023-04-07
sequence: sequence
division: CON
label: NZ_CP116306.1
type: RefSeq
SIO_000068: refseq
dblink: PRJNA224116
dblink: SAMN32758707
keyword: RefSeq
source: Xanthomonas perforans (Xanthomonas euvesicatoria pv. perforans)
organism: Xanthomonas perforans
taxonomy: Bacteria; Pseudomonadota; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.
reference: 1
reference: 2
comment: REFSEQ INFORMATION: The reference sequence is identical to\nCP116306.1.\nThe annotation was added by the NCBI Prokaryotic Genome Annotation\nPipeline (PGAP). Information about PGAP can be found here:\nhttps://www.ncbi.nlm.nih.gov/genome/annotation_prok/\n\n##Genome-Assembly-Data-START##\nAssembly Date :: 08-AUG-2021\nAssembly Method :: Canu v. 2.1\nAssembly Name :: UFL_GEV872_pb1.1\nGenome Representation :: Full\nExpected Final Version :: Yes\nGenome Coverage :: 1100x\nSequencing Technology :: PacBio Sequel; Illumina MiSeq\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI RefSeq\nAnnotation Date :: 01/27/2023 07:36:58\nAnnotation Pipeline :: NCBI Prokaryotic Genome\n Annotation Pipeline (PGAP)\nAnnotation Method :: Best-placed reference protein\n set; GeneMarkS-2+\nAnnotation Software revision :: 6.4\nFeatures Annotated :: Gene; CDS; rRNA; tRNA; ncRNA\nGenes (total) :: 4,515\nCDSs (total) :: 4,419\nGenes (coding) :: 4,330\nCDSs (with protein) :: 4,330\nGenes (RNA) :: 96\nrRNAs :: 2, 2, 2 (5S, 16S, 23S)\ncomplete rRNAs :: 2, 2, 2 (5S, 16S, 23S)\ntRNAs :: 55\nncRNAs :: 35\nPseudo Genes (total) :: 89\nCDSs (without protein) :: 89\nPseudo Genes (ambiguous residues) :: 0 of 89\nPseudo Genes (frameshifted) :: 45 of 89\nPseudo Genes (incomplete) :: 47 of 89\nPseudo Genes (internal stop) :: 18 of 89\nPseudo Genes (multiple problems) :: 17 of 89\n##Genome-Annotation-Data-END##

sequence
subclass of: SO_0000155
sequence length: 43915
topology: linear
so has quality: SO_0000987
location: 1..43915
location: region:1-43915:1
RO_0002162: 442694

NZ_CP116306
type: RefSeq
SIO_000068: refseq

PRJNA224116
type: BioProject
SIO_000068: bioproject

SAMN32758707
type: BioSample
SIO_000068: biosample

1
title: Estimating rates of bacterial mutation during epidemic
author: Sharma, A.
author: Timilsina, S.
author: Abrahamian, P.
author: Minsavage, G.V.
author: Jones, J.B.
author: Vallad, G.E.
author: Goss, E.M.
journal: Unpublished

2
title: Direct Submission
author: Sharma, A.
author: Timilsina, S.
author: Abrahamian, P.
author: Minsavage, G.V.
author: Jones, J.B.
author: Vallad, G.E.
author: Goss, E.M.
journal: Submitted (16-JAN-2023) Plant Pathology, University of Florida, 2550 Hull Rd, Gainesville, Fl 32611, USA

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:43915:1
position: 43915
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-43915:1:source
so part of: sequence
organism: Xanthomonas perforans
mol type: genomic DNA
strain: GEV872
host: Tomato
plasmid: pGEV872.1
country: USA: Immokalee, FL
collection date: 2012-08-24

442694
type: Taxonomy
SIO_000068: taxonomy

PJW04_RS21865
type: Gene
subclass of: SO_0000704
RO_0002162: 442694
locus tag: PJW04_RS21865
old locus tag: PJW04_21865
so part of: sequence
location: 24..722
location: region:24-722:1
so has part: feature:24-722:1:exon
subclass of: SO_0000010

79909849
type: Gene
SIO_000068: ncbigene

position:24:1
position: 24
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:722:1
position: 722
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:24-722:1:exon

PJW04_RS21865
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 442694
locus tag: PJW04_RS21865
old locus tag: PJW04_21865
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017162873.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DNA-binding protein
translation: MEPSQDARDRILAAADALYDQAGREVFPTVDAVRKAAKVNMNEANTVMKEWRRMQTRPAPTVQVPEAVQQVAGTAVLALWQAAQDAANDALRAAQAGWEAERQEADALSQQMADAYEAQALELEAAQARIAELEAAMQQAVTAAATHQAAIDQVRIELVDLQQRASAADARATELRTELDRAHLVAAEQRSAAGQAREDAATLRGRLAAYEGMATLPPAKATPGKPRGKGVG
SIO_010081: PJW04_RS21865
subclass of: SO_0000673
so part of: PJW04_RS21865
location: 24..722
location: region:24-722:1
so has part: feature:24-722:1:exon

WP_046932854.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:24-722:1:exon

PJW04_RS21870
type: Gene
subclass of: SO_0000704
RO_0002162: 442694
locus tag: PJW04_RS21870
old locus tag: PJW04_21870
so part of: sequence
location: 849..1487
location: region:849-1487:1
so has part: feature:849-1487:1:exon
subclass of: SO_0000010

79909850
type: Gene
SIO_000068: ncbigene

position:849:1
position: 849
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1487:1
position: 1487
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:849-1487:1:exon

PJW04_RS21870
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 442694
locus tag: PJW04_RS21870
old locus tag: PJW04_21870
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017163694.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ParA family partition ATPase
translation: MKTVAIAVQKGGAGKTTIAVHLAVAAQQAGLRVALADTDPQGSAKAWAETRSDSTLEVVAITSANVGAAVAAAAEEGYDLLIVDTPPHASAGIAAALEHADLALMPVRPSLLDLAAAPASIRLLHASGKPGAFILSSAPIRASETREIERELANTGIPVLETVIHDRTAYRRALAHGQAVGEFEPAGKAAFEVRALWREVNTLLGATKGTQA
SIO_010081: PJW04_RS21870
subclass of: SO_0000673
so part of: PJW04_RS21870
location: 849..1487
location: region:849-1487:1
so has part: feature:849-1487:1:exon

WP_005995294.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:849-1487:1:exon

PJW04_RS21875
type: Gene
subclass of: SO_0000704
RO_0002162: 442694
locus tag: PJW04_RS21875
old locus tag: PJW04_21875
so part of: sequence
location: 1484..1819
location: region:1484-1819:1
so has part: feature:1484-1819:1:exon
subclass of: SO_0000010

79909851
type: Gene
SIO_000068: ncbigene

position:1484:1
position: 1484
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1819:1
position: 1819
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1484-1819:1:exon

PJW04_RS21875
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 442694
locus tag: PJW04_RS21875
old locus tag: PJW04_21875
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017163695.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MNTGLTGKLAALDKNKTQPEKPARPAADADSAQGTSRPASAGKSAPKVGATRTVTIRHLTDDDLRRLSEFRYTHNLTIQDISIKGISMFLTSMGLAPLSAMADAPDDGQGE
SIO_010081: PJW04_RS21875
subclass of: SO_0000673
so part of: PJW04_RS21875
location: 1484..1819
location: region:1484-1819:1
so has part: feature:1484-1819:1:exon

WP_017160621.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1484-1819:1:exon

PJW04_RS21880
type: Gene
subclass of: SO_0000704
RO_0002162: 442694
locus tag: PJW04_RS21880
old locus tag: PJW04_21880
so part of: sequence
location: 2160..2624
location: region:2160-2624:1
so has part: feature:2160-2624:1:exon
subclass of: SO_0000010

79909852
type: Gene
SIO_000068: ncbigene

position:2160:1
position: 2160
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2624:1
position: 2624
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2160-2624:1:exon

PJW04_RS21880
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 442694
locus tag: PJW04_RS21880
old locus tag: PJW04_21880
inference: COORDINATES: similar to AA sequence:RefSeq:WP_019238174.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF2840 domain-containing protein
translation: MGAQVVEAFAKGRTNRRILAGKPRQVGRWVIGDEGTRRRLLSFAPGDRFALDLWEQNDYGTTRWRVVLCEALQPGETGDSVPSVRPDVAILADITGATRVRAYVAWLALNRAKIETLNRLELARIEQFFQRMPLARLKVLTADVRAKLPRKRRG
SIO_010081: PJW04_RS21880
subclass of: SO_0000673
so part of: PJW04_RS21880
location: 2160..2624
location: region:2160-2624:1
so has part: feature:2160-2624:1:exon

WP_017160619.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2160-2624:1:exon

PJW04_RS21885
type: Gene
subclass of: SO_0000704
RO_0002162: 442694
locus tag: PJW04_RS21885
old locus tag: PJW04_21885
so part of: sequence
location: 2629..3225
location: region:2629-3225:1
so has part: feature:2629-3225:1:exon
subclass of: SO_0000010

79909853
type: Gene
SIO_000068: ncbigene

position:2629:1
position: 2629
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3225:1
position: 3225
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2629-3225:1:exon

PJW04_RS21885
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 442694
locus tag: PJW04_RS21885
old locus tag: PJW04_21885
inference: COORDINATES: protein motif:HMM:NF021981.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: S26 family signal peptidase
translation: MSVRRKKVISGLVIGLGLAVLAPVFGWASARVLSAFGFTVIANLSPSVAQGMYLLDRNVRSAERGQLVAFPPHNAPARYGFERGWMKPGSLYIKRVGAIAGDTVCVNVEVTIATPTTPGHPATFTRVGAVSATDHTGVPLPHALQGCHRVPAGHIFPIGDGLANSYDGRYYGFVPVALIAGRITPIWTQAQPDGADHE
SIO_010081: PJW04_RS21885
subclass of: SO_0000673
so part of: PJW04_RS21885
location: 2629..3225
location: region:2629-3225:1
so has part: feature:2629-3225:1:exon

WP_074038435.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2629-3225:1:exon

PJW04_RS21890
type: Gene
subclass of: SO_0000704
RO_0002162: 442694
locus tag: PJW04_RS21890
old locus tag: PJW04_21890
so part of: sequence
location: 3218..3808
location: region:3218-3808:1
so has part: feature:3218-3808:1:exon
subclass of: SO_0000010

79909854
type: Gene
SIO_000068: ncbigene

position:3218:1
position: 3218
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3808:1
position: 3808
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3218-3808:1:exon

PJW04_RS21890
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 442694
locus tag: PJW04_RS21890
old locus tag: PJW04_21890
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017113463.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: lytic transglycosylase domain-containing protein
translation: MSDLMSLILACSVGVHPQTVQAIIKHESGGNPYAINNQARSFYPTRLEDAQSIAVEQVRAGRSTDIGLMQINSQHLGKFGLTPIDLLDPCTNIRVGTTILSQNYAQTWAKYRAEKPALLGALSMYNTGNESRGLRNGYVGWVSQAAGVTVNLPSGARLSGRRSTEAQSNAVSMVSPAAAPTGFAGTGPKAAKQGPR
SIO_010081: PJW04_RS21890
subclass of: SO_0000673
so part of: PJW04_RS21890
location: 3218..3808
location: region:3218-3808:1
so has part: feature:3218-3808:1:exon

WP_050545661.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3218-3808:1:exon

PJW04_RS21895
type: Gene
subclass of: SO_0000704
RO_0002162: 442694
locus tag: PJW04_RS21895
old locus tag: PJW04_21895
so part of: sequence
location: 4108..6234
location: region:4108-6234:1
so has part: feature:4108-6234:1:exon
subclass of: SO_0000010

79909855
type: Gene
SIO_000068: ncbigene

position:4108:1
position: 4108
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6234:1
position: 6234
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4108-6234:1:exon

PJW04_RS21895
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 442694
locus tag: PJW04_RS21895
old locus tag: PJW04_21895
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017114728.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF3363 domain-containing protein
translation: MGGSDKRTSAGPGEGSGKGGPGASSSDKPLRVRLSKGRQARNNAQVNEVISRVKSAAKRAARTGRISGASTHHAGRAAGVRIDTGSRQQRVTVKARVVAAPRVGAKAAMQRHVDYAQRHGVDKDGGPARPFTDTGELTREQTAQFAERAEPDRHSFRFIVSPENGADMQLESYTRQLMQQMEQDLGSKLDWMAVAHHDTDNPHVHVIVRGVDDKGGDLVISRDYISNGIRERARELATRELGYRTDIDIYRSAAKEVTQERWTGLDASLLREQQSRESGTIHAGKAHTDPFRNAQRQLRLQRLAVLRDHGLATEQSPGRWTIHPNAPEAMRAMAQERRLSGQLKPHLDAERSRRGLLADQTSLKAGPVRGVVLDRGLADKLSGTEYVIVGGFDGQVHYASLSIHSERHLPERGRVGDVVELGSYTPPAATSADKNVLRRAQSGFYDPRQHLAEVQTWDPKRLPQNATPESYIEAHVRRMEALASRGHVTKRLDGSFKVPADLLARLDGDPAIGRQRNAFVRLDVLGKGPLNRQSQVIARTFLDDELAAGRLAQLQGTNVRTRTQAQFLEALEARTDRLVALRMAERTPAGVRLAAGFDERMRALELGEAQQRLAAKYGQPVNLDVARRFQGSVQAIENLPSGPHAVIVQNGTFAVVPAKDGLQRQLGNTVAVQLAQGQSINQAFQSVRIRFAAMDALDKGKLLGLTRS
SIO_010081: PJW04_RS21895
subclass of: SO_0000673
so part of: PJW04_RS21895
location: 4108..6234
location: region:4108-6234:1
so has part: feature:4108-6234:1:exon

WP_228903368.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4108-6234:1:exon

PJW04_RS21900
type: Gene
subclass of: SO_0000704
RO_0002162: 442694
gene: traG
locus tag: PJW04_RS21900
old locus tag: PJW04_21900
so part of: sequence
location: 6239..8302
location: region:6239-8302:1
so has part: feature:6239-8302:1:exon
subclass of: SO_0000010

79909856
type: Gene
SIO_000068: ncbigene

position:6239:1
position: 6239
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8302:1
position: 8302
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6239-8302:1:exon

PJW04_RS21900
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 442694
gene: traG
locus tag: PJW04_RS21900
old locus tag: PJW04_21900
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017113465.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: IncP-type conjugal transfer protein TraG
translation: MAPQSKQREKTRHAGGLRGGPIVACLLCLFLGVWAATQYVAYALAYQPQLGAPWFQIQGHGIYAPWSYFPWLWDYNAYAPDIFTRAIYIVGASAVLGFVVMVAVAIYRTRAQEDVLTHGSARWAEAKEIEKSGLLGQAGVVLGLTEDGRYLTHDGPEHLEVTAPSRSGKGVGIVVPTLLNWQASVVVNDIKGENWELTSGYRSRIGYVLKFNPTQRDTCRFNPLAEIRPGDNEVKDAQNVTDMLVDPDGKGKPDHWSKEADSWLLAVVLHVLYAEPDKTLAGIAMFLDNPERTMEATLQYMLDTKHRNGTVHPVVAIGARAMLNKSANERSGVHSTARSFFNLYYDPIVQAATCESDFRITDLMRAKYPLSLYLISPPSDKSRLRPLFRLMLQQITRRLTEELHPEGNKHRLLLLVDEFPSLGKLEFFEEGLGYVAGYGIKCMMINQSYNQIVKYYGPSNTVMDGAHIHVWYAPNTDETAKRISDSLGMTTEIHQQTNYTGGRLSGWLGHVMVSNQESARALMTPGEVREMDPAKKIIVVAGLPPIMAVKIKFYSDAKFRDLVPPTDARGKVLDPTHKYAPVANTAARPYPYGPPVAGNPWGKLTPAVVPVAVAAALQPAVDDSRDLDPAPEPTPAPEVAVEAAPTLDDDIDADADADIDTHELTVSPAAKADGMDAADDDMDYMLP
SIO_010081: PJW04_RS21900
subclass of: SO_0000673
so part of: PJW04_RS21900
location: 6239..8302
location: region:6239-8302:1
so has part: feature:6239-8302:1:exon

WP_046932856.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:6239-8302:1:exon

PJW04_RS21905
type: Gene
subclass of: SO_0000704
RO_0002162: 442694
locus tag: PJW04_RS21905
old locus tag: PJW04_21905
so part of: sequence
location: 8299..8790
location: region:8299-8790:1
so has part: feature:8299-8790:1:exon
subclass of: SO_0000010

79909857
type: Gene
SIO_000068: ncbigene

position:8299:1
position: 8299
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8790:1
position: 8790
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8299-8790:1:exon

PJW04_RS21905
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 442694
locus tag: PJW04_RS21905
old locus tag: PJW04_21905
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006451398.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MKKSVGKTILHTQIETRLMQLAKREAAERRIPLRAVVEAALAERYDPEHAKAEEMLVLKELRSLRNEVRNVHFGNQMLVELTTLTTKNLFARLPAATPASNAAGEGFYNALIASVERVFSGRTPLLDKLTASLMRAQTDSEFDALQAASGGNPPTFSGRQKWS
SIO_010081: PJW04_RS21905
subclass of: SO_0000673
so part of: PJW04_RS21905
location: 8299..8790
location: region:8299-8790:1
so has part: feature:8299-8790:1:exon

WP_046933548.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:8299-8790:1:exon

PJW04_RS21910
type: Gene
subclass of: SO_0000704
RO_0002162: 442694
locus tag: PJW04_RS21910
old locus tag: PJW04_21910
so part of: sequence
location: complement(8787..9874)
location: region:8787-9874:-1
so has part: feature:8787-9874:-1:exon
subclass of: SO_0000010

79909858
type: Gene
SIO_000068: ncbigene

position:8787:-1
position: 8787
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9874:-1
position: 9874
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8787-9874:-1:exon

PJW04_RS21910
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 442694
locus tag: PJW04_RS21910
old locus tag: PJW04_21910
inference: COORDINATES: similar to AA sequence:RefSeq:WP_076611493.1
ribosomal slippage: true
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: programmed frameshift; Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: IS3 family transposase
translation: MKKSRFTDSQIIAVLKQAQAGAPVPELCREHGISSATFYKWRSKFGGMDVSMVARMKELEEENRRLKKMYAEAQLSTDLLKEALGKKMVRPSQRREMAQSAVTSGRTNIRHACQTFAVSQTCFRYQAKASEQNARIADWLIRLTTAHRDWGFGLCYLYLRNVKGFGWNHKRIYRIYRELELNLRIKPKKRLVRERPQPLAVPETINQVWSMDFMQDQLADGRSFRLFNVLDDFNREGLGIEVDLSLPSARVIRSLEQIIEWRGKPAVIRCDNGPEYISGALLSWAQRHGIRVEHIQPGKPQQNAYVERYNRTIRYAWLAQTLFDTIDQVQDKATRWLWTYNHERPNMALGGITPAMKLAMAA
SIO_010081: PJW04_RS21910
subclass of: SO_0000673
so part of: PJW04_RS21910
location: complement(join(8787..9622,9622..9874))
location: region:8787-9874:-1
so has part: feature:9622-9874:-1:exon
so has part: feature:8787-9622:-1:exon

WP_087944893.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:9622-9874:-1:exon

position:9622:-1
position: 9622
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:8787-9622:-1:exon

PJW04_RS21915
type: Gene
subclass of: SO_0000704
RO_0002162: 442694
locus tag: PJW04_RS21915
old locus tag: PJW04_21915
pseudo: true
so part of: sequence
location: 10454..10844
location: region:10454-10844:1
so has part: feature:10454-10844:1:exon
subclass of: SO_0000010

79909859
type: Gene
SIO_000068: ncbigene

position:10454:1
position: 10454
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:10844:1
position: 10844
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:10454-10844:1:exon

PJW04_RS21915
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 442694
locus tag: PJW04_RS21915
old locus tag: PJW04_21915
inference: COORDINATES: similar to AA sequence:RefSeq:WP_007974941.1
note: frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: hypothetical protein
SIO_010081: PJW04_RS21915
subclass of: SO_0000673
so part of: PJW04_RS21915
location: 10454..10844
location: region:10454-10844:1
so has part: feature:10454-10844:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:10454-10844:1:exon

PJW04_RS21920
type: Gene
subclass of: SO_0000704
RO_0002162: 442694
locus tag: PJW04_RS21920
old locus tag: PJW04_21920
so part of: sequence
location: 11357..12175
location: region:11357-12175:1
so has part: feature:11357-12175:1:exon
subclass of: SO_0000010

79909860
type: Gene
SIO_000068: ncbigene

position:11357:1
position: 11357
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:12175:1
position: 12175
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11357-12175:1:exon

PJW04_RS21920
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 442694
locus tag: PJW04_RS21920
old locus tag: PJW04_21920
inference: COORDINATES: similar to AA sequence:RefSeq:WP_007968746.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MPAVDTGPHAQGPKPTAPSGRPHKRVHWRQPKPLAGKKRRPGVLDATRHGLVRALEERKGAWKRIRHNVIVAGYALDKALTRVRGLRKDGADSLLAMAVALLYLADVRTGFVGKPRQGGGPWQRYTLPDLAQLAYGGQSDAEQRRARRSLDMMVSLGWAFPTKQVRRHTKDADGGDLWCSEAGVRRLNFQRLCKMVGTSRLLKRDRKHADQARGTGVASFTQAQARRQPAQEPRTTPRKGDARPAAHRATGDPPGDAQSAVRHISDILALFN
SIO_010081: PJW04_RS21920
subclass of: SO_0000673
so part of: PJW04_RS21920
location: 11357..12175
location: region:11357-12175:1
so has part: feature:11357-12175:1:exon

WP_025988705.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:11357-12175:1:exon

PJW04_RS21925
type: Gene
subclass of: SO_0000704
RO_0002162: 442694
locus tag: PJW04_RS21925
old locus tag: PJW04_21925
so part of: sequence
location: 12832..13089
location: region:12832-13089:1
so has part: feature:12832-13089:1:exon
subclass of: SO_0000010

79909861
type: Gene
SIO_000068: ncbigene

position:12832:1
position: 12832
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:13089:1
position: 13089
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:12832-13089:1:exon

PJW04_RS21925
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 442694
locus tag: PJW04_RS21925
old locus tag: PJW04_21925
inference: COORDINATES: similar to AA sequence:RefSeq:WP_005995706.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: helix-turn-helix transcriptional regulator
translation: MPGRPRAADSHQDPKPVPVERLIFARNFCQARKAAKLSQRGIRDRTGFAQGWISAVETGKSAPNLDSMAVLAECVGVPLWKLLVP
SIO_010081: PJW04_RS21925
subclass of: SO_0000673
so part of: PJW04_RS21925
location: 12832..13089
location: region:12832-13089:1
so has part: feature:12832-13089:1:exon

WP_074038434.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:12832-13089:1:exon

PJW04_RS21930
type: Gene
subclass of: SO_0000704
RO_0002162: 442694
locus tag: PJW04_RS21930
old locus tag: PJW04_21930
so part of: sequence
location: 13183..14190
location: region:13183-14190:1
so has part: feature:13183-14190:1:exon
subclass of: SO_0000010

79909862
type: Gene
SIO_000068: ncbigene

position:13183:1
position: 13183
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:14190:1
position: 14190
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:13183-14190:1:exon

PJW04_RS21930
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 442694
locus tag: PJW04_RS21930
old locus tag: PJW04_21930
inference: COORDINATES: similar to AA sequence:RefSeq:WP_005995704.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ATPase, T2SS/T4P/T4SS family
translation: MNASVSPPTTRHSRLLDMMKSALGGAIGELLDDPDVEEVRANPDGRLWYVKDGRRICHEHTLNVNTRARVIKIVADHVGEIADKDNPSFPAELPESGYRFHAILPPESPDGPTFVIRKKSNLRLTLDDYVTNGQLTQRQRDIIVTAVHDRDNIVIVGGAHTGKTTFANAVLYEMGRVTGRVITLEDTLELRVEADEVVRLRTVRNRDQITRSMTHLLRDTLRLTPDRLIVGEVRGPEVMDMLDAWNTGHPGGLCTIHANSANEALERIEDLLVQGGFLPVPRKIARTVQLIVSIGFETVDDDEGRKAVRRVREVLRVKGVEQTPEGHVYKLLSAE
SIO_010081: PJW04_RS21930
subclass of: SO_0000673
so part of: PJW04_RS21930
location: 13183..14190
location: region:13183-14190:1
so has part: feature:13183-14190:1:exon

WP_046932834.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:13183-14190:1:exon

PJW04_RS21935
type: Gene
subclass of: SO_0000704
RO_0002162: 442694
locus tag: PJW04_RS21935
old locus tag: PJW04_21935
so part of: sequence
location: 14265..14585
location: region:14265-14585:1
so has part: feature:14265-14585:1:exon
subclass of: SO_0000010

79909863
type: Gene
SIO_000068: ncbigene

position:14265:1
position: 14265
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:14585:1
position: 14585
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:14265-14585:1:exon

PJW04_RS21935
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 442694
locus tag: PJW04_RS21935
old locus tag: PJW04_21935
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017162817.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: TrbC/VirB2 family protein
translation: MTMKLRNTCTLQLLTLAFLLLPAAAYASGTGMPWEDWLDKILNSITGPVAKAIGVISIVVCGLGMANSQGGTGMKQLMMVLLGLSIAFTASTFFLSFLGFGGGAVF
SIO_010081: PJW04_RS21935
subclass of: SO_0000673
so part of: PJW04_RS21935
location: 14265..14585
location: region:14265-14585:1
so has part: feature:14265-14585:1:exon

WP_017160734.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:14265-14585:1:exon

PJW04_RS21940
type: Gene
subclass of: SO_0000704
RO_0002162: 442694
locus tag: PJW04_RS21940
old locus tag: PJW04_21940
so part of: sequence
location: 14588..14854
location: region:14588-14854:1
so has part: feature:14588-14854:1:exon
subclass of: SO_0000010

79909864
type: Gene
SIO_000068: ncbigene

position:14588:1
position: 14588
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:14854:1
position: 14854
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:14588-14854:1:exon

PJW04_RS21940
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 442694
locus tag: PJW04_RS21940
old locus tag: PJW04_21940
inference: COORDINATES: protein motif:HMM:NF016957.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: VirB3 family type IV secretion system protein
translation: MHEQTNPDGYEVPVHRALSTPRLIAGIPRDMAVVSLTMAAALILGLQSWWSLPLYLVIHIGLVLMTKYDTQWPEALKRALHLKNHYRA
SIO_010081: PJW04_RS21940
subclass of: SO_0000673
so part of: PJW04_RS21940
location: 14588..14854
location: region:14588-14854:1
so has part: feature:14588-14854:1:exon

WP_033478150.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:14588-14854:1:exon

PJW04_RS21945
type: Gene
subclass of: SO_0000704
RO_0002162: 442694
locus tag: PJW04_RS21945
old locus tag: PJW04_21945
so part of: sequence
location: 14921..17491
location: region:14921-17491:1
so has part: feature:14921-17491:1:exon
subclass of: SO_0000010

79909865
type: Gene
SIO_000068: ncbigene

position:14921:1
position: 14921
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:17491:1
position: 17491
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:14921-17491:1:exon

PJW04_RS21945
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 442694
locus tag: PJW04_RS21945
old locus tag: PJW04_21945
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017160736.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF853 family protein
translation: MQRLPKYSNEPTDIGDVLPWAYLVAPGVVLNRNASLITTLRYRGPDLDSATKHELIAVSAQMNNLFRRLGDGWYFQIDAQRAPSTNYPSGEHFPDPMSYLIDEERRTIAETGVHFETTYYFTLGWLPPKARESAARAWFFTDPDGQRKSAANRDRQTINDWLEKFVVERVRLLEAFSAILPEVHALDDTELLTYLHDTVSTKRHPVVPGDVSQELCRVLPDTPLIGGKEPKLGKHHMGIITVRQFPTQTTPGILDRLNRMGMAYRWVTRWVALDKATADKEMKKIQREWFSGRKSFMVILKELLSKSESALENPEALANAADANAAMQEIAAQAVGYGYFTQSLIVLDTDPRRLETKLRAVEREINGLGFVTIDEARDGNAIDAFLGAVPGNAQHNIRRPMVSTLNLAHAMPSSSVWAGPRYCQNDLFPGNARLDHSPPHMFVVTGETTPFRFSTYVGDVGHAMVIGPTGAGKSLFLNLAETQFRRYESAQVYIFDKGGSSRITTDHVGGRFYDLGGDSSPAFQPLAHVDNDQERAWAQEWLIDIIVGEGVEMTPQRKRAIWDALNELGADDSPVEQRTITGFTVLVQDPVIKEALHPFTADGAHKKLLDASHDDVSLGSWLAFEMEELMNTPQVVMPVLTYLFHRLEQRFDAKRPSLLVLDEAWLFLDHPAFSAKIREWLKVLRKANVAVWFATQSLADVAQSKIMPTLIEACMTKIFLPNSSARNDEVAKFYRMFGLNDKQLDILASSTPKRDYYLTSPQGNRLFSLGLGPLALAVCGATGKEAQRDAIAIRKTTNSPVQFNEAYLSHLVNKHDQAQASKPESQRTQSPLQWALDFVRSVDSSPAAPSNATVEA
SIO_010081: PJW04_RS21945
subclass of: SO_0000673
so part of: PJW04_RS21945
location: 14921..17491
location: region:14921-17491:1
so has part: feature:14921-17491:1:exon

WP_017160736.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:14921-17491:1:exon

PJW04_RS21950
type: Gene
subclass of: SO_0000704
RO_0002162: 442694
locus tag: PJW04_RS21950
old locus tag: PJW04_21950
so part of: sequence
location: 17510..18295
location: region:17510-18295:1
so has part: feature:17510-18295:1:exon
subclass of: SO_0000010

79909866
type: Gene
SIO_000068: ncbigene

position:17510:1
position: 17510
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:18295:1
position: 18295
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:17510-18295:1:exon

PJW04_RS21950
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 442694
locus tag: PJW04_RS21950
old locus tag: PJW04_21950
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017164021.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: conjugal transfer protein
translation: MTIRRVTAVLTVAIGIAVAGGSAVYAPPAQAIVCANCSNLVTQLLQQSKEISAYAKQVQQYKTQLDQLNLQIQQVANEGRNLASLPRNVFGEYQQVYNSYKQSISQLRGSMANLQNTRDMFAQRYPEVTNDTTFQQLSAMVDQWQSQGRENVEDALYSGAAVLDTLDSTNQQFETMGQASQSATGALAATQAGNQINMLVGQELMKLNAQTAAMNQAVLEEQARQLAGDRVTQQNIDNAHRNEKAFQKSTQPAAKPIGEWW
SIO_010081: PJW04_RS21950
subclass of: SO_0000673
so part of: PJW04_RS21950
location: 17510..18295
location: region:17510-18295:1
so has part: feature:17510-18295:1:exon

WP_017160737.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:17510-18295:1:exon

PJW04_RS21955
type: Gene
subclass of: SO_0000704
RO_0002162: 442694
locus tag: PJW04_RS21955
old locus tag: PJW04_21955
so part of: sequence
location: 18663..19016
location: region:18663-19016:1
so has part: feature:18663-19016:1:exon
subclass of: SO_0000010

79909867
type: Gene
SIO_000068: ncbigene

position:18663:1
position: 18663
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:19016:1
position: 19016
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:18663-19016:1:exon

PJW04_RS21955
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 442694
locus tag: PJW04_RS21955
old locus tag: PJW04_21955
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MNGRVRASLVLATAALAGCGGDRTAQVPGSVFATATIPGDQPIPIVEKLGLPDKCKRLETFDQACSEQIDVAYGKGAGGDARSKLGTCSAYGNCVGMPRSRAYEKSTVPPAKVDFLK
SIO_010081: PJW04_RS21955
subclass of: SO_0000673
so part of: PJW04_RS21955
location: 18663..19016
location: region:18663-19016:1
so has part: feature:18663-19016:1:exon

WP_128698587.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:18663-19016:1:exon

PJW04_RS21960
type: Gene
subclass of: SO_0000704
RO_0002162: 442694
gene: trbL
locus tag: PJW04_RS21960
old locus tag: PJW04_21960
so part of: sequence
location: 19075..20556
location: region:19075-20556:1
so has part: feature:19075-20556:1:exon
subclass of: SO_0000010

79909868
type: Gene
SIO_000068: ncbigene

position:19075:1
position: 19075
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:20556:1
position: 20556
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:19075-20556:1:exon

PJW04_RS21960
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 442694
gene: trbL
locus tag: PJW04_RS21960
old locus tag: PJW04_21960
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017160738.1
GO process: GO:0009291 - unidirectional conjugation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: P-type conjugative transfer protein TrbL
translation: MDPTTTGFLTALLNNFVAVFSNGFGIITPRASAILGTLAAIEVALASLFWALRGEDFTAPFLRKLLRIGFFAFLVASWPTLTEGVASGLAQIGSLAGGGSGAPLVKDPSRILEQAMAVIKPIEDEMTRIQHGSWYQKIAVLAVVIQYTIAELCVLVAFFILAITCLLTQIEFALVAVLGLILVPWGVSNHTAFLAEKAIGAVIAQGVKLMVLSFIIAVYGGVLNTFALSPAPSPMDTWLLAGSAFVMAIIAVHAPAVAGGLLSGSPSLTAGSAAGVAIGAGAAAIGAGVGAAALGRMGAASAAKTITAAGQIHGAGSAAAANSTGAGAAALSNPGVRGSVIGGLMAASTTPAGQAVAAGVQRAASTRLGQAAIKFGSAAAANIDRGVSAGASYAAAGASEVGRMAAAPVTNAGAAVKDAWSQGVAMGSGVPPAAAPAPPATPTPSPERLEAGRQRFSDAATVAKATTTAIKGATTTSGGGSGNPTIAPTNDES
SIO_010081: PJW04_RS21960
subclass of: SO_0000673
so part of: PJW04_RS21960
location: 19075..20556
location: region:19075-20556:1
so has part: feature:19075-20556:1:exon

WP_017160738.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:19075-20556:1:exon

PJW04_RS21965
type: Gene
subclass of: SO_0000704
RO_0002162: 442694
gene: trbF
locus tag: PJW04_RS21965
old locus tag: PJW04_21965
so part of: sequence
location: 20563..21273
location: region:20563-21273:1
so has part: feature:20563-21273:1:exon
subclass of: SO_0000010

79909869
type: Gene
SIO_000068: ncbigene

position:20563:1
position: 20563
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:21273:1
position: 21273
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:20563-21273:1:exon

PJW04_RS21965
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 442694
gene: trbF
locus tag: PJW04_RS21965
old locus tag: PJW04_21965
inference: COORDINATES: similar to AA sequence:RefSeq:WP_019238158.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: conjugal transfer protein TrbF
translation: MSSTNDLLQTPVGQRPSSPPMSPHHDSARKGWTDKLEKSESDKRAWRWAAVGGYALSVLLTGGLIAVSNRPPPKPLIARINVDGAPQVVGYASPNYTPGQAEIRYFLKHWVELVRTVPLDPVVVKSAWNEAYSFMSPASANKLNVEARAPGSTMSKVGTETVTTQVTSVVPVSADSYQVRWVETSFTDQGQVKERATWTSTFTVKQSTPDPKVELVNPLGLFITDFNWQRDIGSTP
SIO_010081: PJW04_RS21965
subclass of: SO_0000673
so part of: PJW04_RS21965
location: 20563..21273
location: region:20563-21273:1
so has part: feature:20563-21273:1:exon

WP_046932831.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:20563-21273:1:exon

PJW04_RS21970
type: Gene
subclass of: SO_0000704
RO_0002162: 442694
gene: trbG
locus tag: PJW04_RS21970
old locus tag: PJW04_21970
so part of: sequence
location: 21300..22292
location: region:21300-22292:1
so has part: feature:21300-22292:1:exon
subclass of: SO_0000010

79909870
type: Gene
SIO_000068: ncbigene

position:21300:1
position: 21300
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:22292:1
position: 22292
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:21300-22292:1:exon

PJW04_RS21970
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 442694
gene: trbG
locus tag: PJW04_RS21970
old locus tag: PJW04_21970
inference: COORDINATES: similar to AA sequence:RefSeq:WP_019238157.1
GO process: GO:0009291 - unidirectional conjugation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: P-type conjugative transfer protein TrbG
translation: MQTMKTSLLPLLLLSAGIANAQTTPQVPAITSALNDNTTAAANATTQANNAPAPAPAYVAPPVPPEHVSPRVAKARSNFDSKQRAQVAEYVGQARQVPTSASTANVGGQTIFTYRPGALYTIYVGAGRQTVIDFQPGEQLTGEVNGSDTVRWLISQVTSGTDAGEQVHLVLKAVEPGLTNDLFIATNRRTYMVTARSVADWSMPSVTWQYPLDTWKAQQAVAAKREAVQPVAVAPDALHFNYDIKGGRYSWKPMQVFDDGAQTYIRMPAMLNATDAPALFLIEKGEPLLVNYRVKGVANGTSGPTYIVDRVFDRAELRVGAKQTITIRRR
SIO_010081: PJW04_RS21970
subclass of: SO_0000673
so part of: PJW04_RS21970
location: 21300..22292
location: region:21300-22292:1
so has part: feature:21300-22292:1:exon

WP_017160769.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:21300-22292:1:exon

PJW04_RS21975
type: Gene
subclass of: SO_0000704
RO_0002162: 442694
locus tag: PJW04_RS21975
old locus tag: PJW04_21975
so part of: sequence
location: 22308..23660
location: region:22308-23660:1
so has part: feature:22308-23660:1:exon
subclass of: SO_0000010

79909871
type: Gene
SIO_000068: ncbigene

position:22308:1
position: 22308
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:23660:1
position: 23660
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:22308-23660:1:exon

PJW04_RS21975
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 442694
locus tag: PJW04_RS21975
old locus tag: PJW04_21975
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017113420.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: TrbI/VirB10 family protein
translation: MQTTNGTPADDERDPVTGESASEGYTPPQDAPIPLATPRPKIKTLDKKKVGIIAGIAGVLIAFAFVQAFMQKPNQNKPKEQPPTANMSTKPEAFNALPGDYATAAQQRAERAPKLGPPMPGEVGQMQYAAQQQASTRAYGGGAQPQTAAQQFAAQQDLQRMQQAANARYAKTSFQQSAGAGGTSNQSQFGGQPGFGGMPPDSPEAVQQQMLAQAAAAAAGAGGPDKTARDDANRQDDKRHFMDEKRDTGTLQSRLTPPATPTVVSAGTLIPALFLTGINSDLPGQITAQVSQPVYDTPTGRYVIIPQGSVLIGAYDSRVTFGQNRVLLVWQRLRFPNGSSLDLEGMPGVDLSGYAGVSDKVNNHWGKVLSSVLLSSTVAAAVATAEGDSFSSFQRDAGQAASQGAAQQINQAGAQLLQRSINVQPTLEIRPGQRVAVMVNKDLALSPYGP
SIO_010081: PJW04_RS21975
subclass of: SO_0000673
so part of: PJW04_RS21975
location: 22308..23660
location: region:22308-23660:1
so has part: feature:22308-23660:1:exon

WP_017160768.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:22308-23660:1:exon

PJW04_RS21980
type: Gene
subclass of: SO_0000704
RO_0002162: 442694
locus tag: PJW04_RS21980
old locus tag: PJW04_21980
so part of: sequence
location: 23785..24039
location: region:23785-24039:1
so has part: feature:23785-24039:1:exon
subclass of: SO_0000010

79909872
type: Gene
SIO_000068: ncbigene

position:23785:1
position: 23785
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:24039:1
position: 24039
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:23785-24039:1:exon

PJW04_RS21980
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 442694
locus tag: PJW04_RS21980
old locus tag: PJW04_21980
inference: COORDINATES: similar to AA sequence:RefSeq:WP_003490070.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MKAIDRDAQRAGLSRRMFMQHLMEEFLLQPTTLVAGGIYRKLDRERLRFHLSVPLHNAVSKYAKKLGVTISVVITTAVANRYPL
SIO_010081: PJW04_RS21980
subclass of: SO_0000673
so part of: PJW04_RS21980
location: 23785..24039
location: region:23785-24039:1
so has part: feature:23785-24039:1:exon

WP_017160767.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:23785-24039:1:exon

PJW04_RS21985
type: Gene
subclass of: SO_0000704
RO_0002162: 442694
locus tag: PJW04_RS21985
old locus tag: PJW04_21985
so part of: sequence
location: 24050..24289
location: region:24050-24289:1
so has part: feature:24050-24289:1:exon
subclass of: SO_0000010

79909873
type: Gene
SIO_000068: ncbigene

position:24050:1
position: 24050
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:24289:1
position: 24289
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:24050-24289:1:exon

PJW04_RS21985
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 442694
locus tag: PJW04_RS21985
old locus tag: PJW04_21985
inference: COORDINATES: similar to AA sequence:RefSeq:WP_008575015.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MARKPSALPKIPVKTERVTKRLQFDPALIKRVEAFCDFYAHTVGAKPDWNDAAVALIEHALDGNRDFTKYLAEQNKPAA
SIO_010081: PJW04_RS21985
subclass of: SO_0000673
so part of: PJW04_RS21985
location: 24050..24289
location: region:24050-24289:1
so has part: feature:24050-24289:1:exon

WP_005997461.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:24050-24289:1:exon

PJW04_RS21990
type: Gene
subclass of: SO_0000704
RO_0002162: 442694
locus tag: PJW04_RS21990
old locus tag: PJW04_21990
so part of: sequence
location: 24362..24610
location: region:24362-24610:1
so has part: feature:24362-24610:1:exon
subclass of: SO_0000010

79909874
type: Gene
SIO_000068: ncbigene

position:24362:1
position: 24362
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:24610:1
position: 24610
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:24362-24610:1:exon

PJW04_RS21990
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 442694
locus tag: PJW04_RS21990
old locus tag: PJW04_21990
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017164027.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MNAPERSLGYRIGEMLYAMSQWSRPARASIVIVGMLAAIVFFWLSIPAAAVAIGFVSLATFWLLLPTDTPADPNTAANDPER
SIO_010081: PJW04_RS21990
subclass of: SO_0000673
so part of: PJW04_RS21990
location: 24362..24610
location: region:24362-24610:1
so has part: feature:24362-24610:1:exon

WP_017160766.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:24362-24610:1:exon

PJW04_RS21995
type: Gene
subclass of: SO_0000704
RO_0002162: 442694
gene: topB
locus tag: PJW04_RS21995
old locus tag: PJW04_21995
so part of: sequence
location: 24612..26798
location: region:24612-26798:1
so has part: feature:24612-26798:1:exon
subclass of: SO_0000010

79909875
type: Gene
SIO_000068: ncbigene

position:24612:1
position: 24612
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:26798:1
position: 26798
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:24612-26798:1:exon

PJW04_RS21995
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 442694
gene: topB
locus tag: PJW04_RS21995
old locus tag: PJW04_21995
EC number: 5.6.2.1
inference: COORDINATES: similar to AA sequence:RefSeq:WP_005997465.1
GO function: GO:0003677 - DNA binding [Evidence IEA]; GO:0003917 - DNA topoisomerase type I (single strand cut, ATP-independent) activity [Evidence IEA]
GO process: GO:0006265 - DNA topological change [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DNA topoisomerase III
translation: MRLWICEKRDQAQNIAPLLGNPKPGQGYIDTDDGRVTWARGHLLEQVGPPGYDKAWEAWNFDVLPMIPSVWKHQPTPDKERELAVLLANIPKATEIIIATDCGAEGEAIARELLDHAGYRGAVRRLWYSALDAASLTKAIASLRPGESSEPLYWASQARSRADWLMGMNLSRAYTLRSRAAGGKGPRHVGRVMSPTLALVVRRDAEIAAFREVTYYELEITAQTALGASVVLTHAPADAGRIFARADAEAILAAATGASGPLAVTHESKAQKPPALMTLSRFQQLASRRFGWSAKKTLDIAQSLYDKELTSYPRTPCMVLPNEQEAEIPRVLETLGQVPGLARHVAALTVHKPTIRPTVFNSAKMAKDNAEHHAIVPTGVPLASRTLSDDEQTAFLLIAQHYLAALMPDYTFNETRMTLEAGGVPFTVTGRVPIAQGWKSVFGTDPDSEDEDDTATPALPDIQDGTRCTVAAAALRPKKTRPPKRYTEGDLIADMLDVGKFATNPEVRKRLKENAGIGTEATRGTIIENLRERGYLEPQGKFIVSTPLARELIAMLPAPITDAATTALWEEKLDELRRGLVPVEARDEFVNKVAANVTRIINAVRDDAAKAAATRAPSEGQLRYAQAIAVALGVPLPANADSSHTAVQAFLDAHGDAYGNLPPSDKQLAYAEKLATEKGATLSDEQRRSRAALGAWLDLHADKKAAPAKKVTGKTTAAKTTRKRKVKV
SIO_010081: PJW04_RS21995
subclass of: SO_0000673
so part of: PJW04_RS21995
location: 24612..26798
location: region:24612-26798:1
so has part: feature:24612-26798:1:exon

WP_046932826.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:24612-26798:1:exon

PJW04_RS22000
type: Gene
subclass of: SO_0000704
RO_0002162: 442694
locus tag: PJW04_RS22000
old locus tag: PJW04_22000
so part of: sequence
location: 26890..27072
location: region:26890-27072:1
so has part: feature:26890-27072:1:exon
subclass of: SO_0000010

79909876
type: Gene
SIO_000068: ncbigene

position:26890:1
position: 26890
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:27072:1
position: 27072
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:26890-27072:1:exon

PJW04_RS22000
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 442694
locus tag: PJW04_RS22000
old locus tag: PJW04_22000
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MKAIRWLRSSGSLTILVAMAVLAVASWSHSQLGILIGWVCLGIGTLYVMFAAPDATGRDS
SIO_010081: PJW04_RS22000
subclass of: SO_0000673
so part of: PJW04_RS22000
location: 26890..27072
location: region:26890-27072:1
so has part: feature:26890-27072:1:exon

WP_228903383.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:26890-27072:1:exon

PJW04_RS22005
type: Gene
subclass of: SO_0000704
RO_0002162: 442694
locus tag: PJW04_RS22005
old locus tag: PJW04_22005
so part of: sequence
location: 27333..27611
location: region:27333-27611:1
so has part: feature:27333-27611:1:exon
subclass of: SO_0000010

79909877
type: Gene
SIO_000068: ncbigene

position:27333:1
position: 27333
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:27611:1
position: 27611
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:27333-27611:1:exon

PJW04_RS22005
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 442694
locus tag: PJW04_RS22005
old locus tag: PJW04_22005
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017164029.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MKDEPSCVPIQSMPSGYYWFLDNCGSPPEIVEVDVEEGFVHLIARDSPLYFPAADTLPTTDRVAFGTYIGPLAYQNALSDASLMRFKFEQEA
SIO_010081: PJW04_RS22005
subclass of: SO_0000673
so part of: PJW04_RS22005
location: 27333..27611
location: region:27333-27611:1
so has part: feature:27333-27611:1:exon

WP_005997470.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:27333-27611:1:exon

PJW04_RS22010
type: Gene
subclass of: SO_0000704
RO_0002162: 442694
locus tag: PJW04_RS22010
old locus tag: PJW04_22010
so part of: sequence
location: 27622..27963
location: region:27622-27963:1
so has part: feature:27622-27963:1:exon
subclass of: SO_0000010

79909878
type: Gene
SIO_000068: ncbigene

position:27622:1
position: 27622
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:27963:1
position: 27963
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:27622-27963:1:exon

PJW04_RS22010
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 442694
locus tag: PJW04_RS22010
old locus tag: PJW04_22010
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017164030.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MPEDIHNVAAFIGSSGMPISDALARAAPFLVSNGEVSWGRYLSLLLVLLLGAVITIVVVSMFTGKSKQDAMRNAGIFLLGVPFALTPLTVPVTFVLFAYAAWRSFRPAARAHQ
SIO_010081: PJW04_RS22010
subclass of: SO_0000673
so part of: PJW04_RS22010
location: 27622..27963
location: region:27622-27963:1
so has part: feature:27622-27963:1:exon

WP_228903382.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:27622-27963:1:exon

PJW04_RS22015
type: Gene
subclass of: SO_0000704
RO_0002162: 442694
locus tag: PJW04_RS22015
old locus tag: PJW04_22015
so part of: sequence
location: 27986..28459
location: region:27986-28459:1
so has part: feature:27986-28459:1:exon
subclass of: SO_0000010

79909879
type: Gene
SIO_000068: ncbigene

position:27986:1
position: 27986
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:28459:1
position: 28459
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:27986-28459:1:exon

PJW04_RS22015
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 442694
locus tag: PJW04_RS22015
old locus tag: PJW04_22015
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MNTEIEYQRYVDAFSPFFDAVLAHVEALPLPEWQRYRTPRPHAPQDGPQLPKNATREDLLNESASLLPLTRQNVIAEYRDIESDLVQVAVVKDHPLFFSSHYGVYCWFGTDAGWSLAASLTYPASPIDHNGCTCGDPGCHRLRCSPSAEISTLQAGA
SIO_010081: PJW04_RS22015
subclass of: SO_0000673
so part of: PJW04_RS22015
location: 27986..28459
location: region:27986-28459:1
so has part: feature:27986-28459:1:exon

WP_126936561.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:27986-28459:1:exon

PJW04_RS22020
type: Gene
subclass of: SO_0000704
RO_0002162: 442694
locus tag: PJW04_RS22020
old locus tag: PJW04_22020
so part of: sequence
location: 28889..29188
location: region:28889-29188:1
so has part: feature:28889-29188:1:exon
subclass of: SO_0000010

79909880
type: Gene
SIO_000068: ncbigene

position:28889:1
position: 28889
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:29188:1
position: 29188
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:28889-29188:1:exon

PJW04_RS22020
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 442694
locus tag: PJW04_RS22020
old locus tag: PJW04_22020
inference: COORDINATES: similar to AA sequence:RefSeq:WP_003490060.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MHHPDQTHEKQPASWLDAEPDERQLMAEADDAEGWELVSLRAVGVTEFLDLDDEPAVRDTPAGTEPDWWIIRKTYKNGRERDDFYLYRTREAAEYDIEN
SIO_010081: PJW04_RS22020
subclass of: SO_0000673
so part of: PJW04_RS22020
location: 28889..29188
location: region:28889-29188:1
so has part: feature:28889-29188:1:exon

WP_005998073.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:28889-29188:1:exon

PJW04_RS22025
type: Gene
subclass of: SO_0000704
RO_0002162: 442694
locus tag: PJW04_RS22025
old locus tag: PJW04_22025
so part of: sequence
location: 29251..29481
location: region:29251-29481:1
so has part: feature:29251-29481:1:exon
subclass of: SO_0000010

79909881
type: Gene
SIO_000068: ncbigene

position:29251:1
position: 29251
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:29481:1
position: 29481
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:29251-29481:1:exon

PJW04_RS22025
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 442694
locus tag: PJW04_RS22025
old locus tag: PJW04_22025
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017166310.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MHDDDMQKQSSQRYRCHMRTRSGMFAQYDGYVDVVSASDDPHELHRAAVAELRRTAFPDYSASMWQLEKAEPINRH
SIO_010081: PJW04_RS22025
subclass of: SO_0000673
so part of: PJW04_RS22025
location: 29251..29481
location: region:29251-29481:1
so has part: feature:29251-29481:1:exon

WP_005998074.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:29251-29481:1:exon

PJW04_RS22030
type: Gene
subclass of: SO_0000704
RO_0002162: 442694
locus tag: PJW04_RS22030
old locus tag: PJW04_22030
so part of: sequence
location: 29558..29800
location: region:29558-29800:1
so has part: feature:29558-29800:1:exon
subclass of: SO_0000010

79909882
type: Gene
SIO_000068: ncbigene

position:29558:1
position: 29558
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:29800:1
position: 29800
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:29558-29800:1:exon

PJW04_RS22030
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 442694
locus tag: PJW04_RS22030
old locus tag: PJW04_22030
inference: COORDINATES: similar to AA sequence:RefSeq:WP_005998075.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MKLLYWLRSSGMWACLLAAAVAMLATIAKSPAMLAIGWAGMIVAGVYAAWYSPDAKRAKVLQANAQRAKAAPHINTQEPA
SIO_010081: PJW04_RS22030
subclass of: SO_0000673
so part of: PJW04_RS22030
location: 29558..29800
location: region:29558-29800:1
so has part: feature:29558-29800:1:exon

WP_005998075.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:29558-29800:1:exon

PJW04_RS22035
type: Gene
subclass of: SO_0000704
RO_0002162: 442694
locus tag: PJW04_RS22035
old locus tag: PJW04_22035
so part of: sequence
location: 29797..29985
location: region:29797-29985:1
so has part: feature:29797-29985:1:exon
subclass of: SO_0000010

79909883
type: Gene
SIO_000068: ncbigene

position:29797:1
position: 29797
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:29985:1
position: 29985
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:29797-29985:1:exon

PJW04_RS22035
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 442694
locus tag: PJW04_RS22035
old locus tag: PJW04_22035
inference: COORDINATES: similar to AA sequence:RefSeq:WP_005998076.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MNLYSVLVWLTAACFTVAVVNIIVSRHAVTLGLLTPFEYRKRVAIMVFGLLTLCMGLWWLKT
SIO_010081: PJW04_RS22035
subclass of: SO_0000673
so part of: PJW04_RS22035
location: 29797..29985
location: region:29797-29985:1
so has part: feature:29797-29985:1:exon

WP_005998076.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:29797-29985:1:exon

PJW04_RS22040
type: Gene
subclass of: SO_0000704
RO_0002162: 442694
locus tag: PJW04_RS22040
old locus tag: PJW04_22040
so part of: sequence
location: complement(30039..30317)
location: region:30039-30317:-1
so has part: feature:30039-30317:-1:exon
subclass of: SO_0000010

79909884
type: Gene
SIO_000068: ncbigene

position:30039:-1
position: 30039
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:30317:-1
position: 30317
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:30039-30317:-1:exon

PJW04_RS22040
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 442694
locus tag: PJW04_RS22040
old locus tag: PJW04_22040
inference: COORDINATES: similar to AA sequence:RefSeq:WP_005918295.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MNTFLRAQLLPLLRGLSRAGLVGFGVVFALYFLFAMLLFVLHDPHASASTERMADMAAPWLVGLAAVHALSKLAGEMVRTWLEDRGEMSPRR
SIO_010081: PJW04_RS22040
subclass of: SO_0000673
so part of: PJW04_RS22040
location: complement(30039..30317)
location: region:30039-30317:-1
so has part: feature:30039-30317:-1:exon

WP_005998078.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:30039-30317:-1:exon

PJW04_RS22045
type: Gene
subclass of: SO_0000704
RO_0002162: 442694
locus tag: PJW04_RS22045
old locus tag: PJW04_22045
so part of: sequence
location: complement(30373..31074)
location: region:30373-31074:-1
so has part: feature:30373-31074:-1:exon
subclass of: SO_0000010

79909885
type: Gene
SIO_000068: ncbigene

position:30373:-1
position: 30373
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:31074:-1
position: 31074
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:30373-31074:-1:exon

PJW04_RS22045
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 442694
locus tag: PJW04_RS22045
old locus tag: PJW04_22045
inference: COORDINATES: protein motif:HMM:NF014045.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: NYN domain-containing protein
translation: MTIAKATAVYIDGYNLYYGRIRGTAFKWLDVVALFDRLLHDQDPTTDLLHVRYFTAPALGRFATHKQASETQAAYLRALAHTHPQRFTTTLGKHSWDKGGTLLPEFVSGQPYDRARRVRVWKLEEKQTDVNLALTMYRDAASARYQQLVVCSNDSDIEPALVAIREDFPSVVLGVVTPRNPPVDGESDRRVSVSLSSRADWTRHYILDGELAAAQLPERVRKPGKPIDKPGHW
SIO_010081: PJW04_RS22045
subclass of: SO_0000673
so part of: PJW04_RS22045
location: complement(30373..31074)
location: region:30373-31074:-1
so has part: feature:30373-31074:-1:exon

WP_017160722.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:30373-31074:-1:exon

PJW04_RS22050
type: Gene
subclass of: SO_0000704
RO_0002162: 442694
locus tag: PJW04_RS22050
old locus tag: PJW04_22050
so part of: sequence
location: 31355..31810
location: region:31355-31810:1
so has part: feature:31355-31810:1:exon
subclass of: SO_0000010

79909886
type: Gene
SIO_000068: ncbigene

position:31355:1
position: 31355
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:31810:1
position: 31810
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:31355-31810:1:exon

PJW04_RS22050
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 442694
locus tag: PJW04_RS22050
old locus tag: PJW04_22050
inference: COORDINATES: similar to AA sequence:RefSeq:WP_007973141.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MTSPISITTLSALASAGVLRTVQLVGQVGGYTVMVRVGQVEKQLTGQRGEPRVFASLDTAAAQLLALGVTVFEVLPANYVRAPKVYRRGRPAALKALAKLQRQAKPAKPAKKPAGAAMATVAKILPSDRAQLKLPGLPRSRKPARTAGAGA
SIO_010081: PJW04_RS22050
subclass of: SO_0000673
so part of: PJW04_RS22050
location: 31355..31810
location: region:31355-31810:1
so has part: feature:31355-31810:1:exon

WP_017160723.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:31355-31810:1:exon

PJW04_RS22055
type: Gene
subclass of: SO_0000704
RO_0002162: 442694
locus tag: PJW04_RS22055
old locus tag: PJW04_22055
so part of: sequence
location: 31807..32676
location: region:31807-32676:1
so has part: feature:31807-32676:1:exon
subclass of: SO_0000010

79909887
type: Gene
SIO_000068: ncbigene

position:31807:1
position: 31807
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:32676:1
position: 32676
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:31807-32676:1:exon

PJW04_RS22055
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 442694
locus tag: PJW04_RS22055
old locus tag: PJW04_22055
inference: COORDINATES: similar to AA sequence:RefSeq:WP_005989203.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MSDRDTLDQVIAERDFLAGLVAQHEAHLRTFSADLQHVLLADFSGEDLGPEYVGAWQRLYALIAPVTTGYTPTPDERGPAPVVHVDAPAARDQDSRADACPARTDPRDTYALNLTLVRGDAALFQGHRFAHARLSQILSSYRELVLRHMPQFTPDEWAALAEMLNDECNEAHYDYLQGKDEDERFSDHLPHGPWITDVDGLAGVATDRAAQRTAPQQQKKVDPFGIFAPTVDLLDLAARLSALTDVQRLATYEKLMPLLYPERCDLVAYDEAQKAESEAAIAELLNTTP
SIO_010081: PJW04_RS22055
subclass of: SO_0000673
so part of: PJW04_RS22055
location: 31807..32676
location: region:31807-32676:1
so has part: feature:31807-32676:1:exon

WP_005989203.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:31807-32676:1:exon

PJW04_RS22060
type: Gene
subclass of: SO_0000704
RO_0002162: 442694
locus tag: PJW04_RS22060
old locus tag: PJW04_22060
so part of: sequence
location: 32739..33203
location: region:32739-33203:1
so has part: feature:32739-33203:1:exon
subclass of: SO_0000010

79909888
type: Gene
SIO_000068: ncbigene

position:32739:1
position: 32739
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:33203:1
position: 33203
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:32739-33203:1:exon

PJW04_RS22060
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 442694
locus tag: PJW04_RS22060
old locus tag: PJW04_22060
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017113485.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MSIKAHIFQPAKAIELAIGTLFTFEEQWYVRGELHNDHRQLLESAIPLTKGAEYFHLGAESCLALASPYRFESRVIGPIRGPGRPLPASLTWTVAGEVVYTEPVSKQFISFAGRQSEGVNTREAFFASHWGGWVLDAEGNEVSRDPLFVIGAEA
SIO_010081: PJW04_RS22060
subclass of: SO_0000673
so part of: PJW04_RS22060
location: 32739..33203
location: region:32739-33203:1
so has part: feature:32739-33203:1:exon

WP_005989197.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:32739-33203:1:exon

PJW04_RS22065
type: Gene
subclass of: SO_0000704
RO_0002162: 442694
gene: avrBsT
locus tag: PJW04_RS22065
old locus tag: PJW04_22065
so part of: sequence
location: complement(34062..35114)
location: region:34062-35114:-1
so has part: feature:34062-35114:-1:exon
subclass of: SO_0000010

79909889
type: Gene
SIO_000068: ncbigene

position:34062:-1
position: 34062
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:35114:-1
position: 35114
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:34062-35114:-1:exon

PJW04_RS22065
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 442694
gene: avrBsT
locus tag: PJW04_RS22065
old locus tag: PJW04_22065
inference: COORDINATES: similar to AA sequence:RefSeq:WP_099982816.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: type III secretion system YopJ family effector AvrBsT
translation: MKNFMRSLGFGSSRSSRSSSSNWNEQQADNDEQTPASSPSTSPSQTSSAFSGLPERPRKKAIALEESLNSSNNIPYEMRMYAEAALSAAKHGSSEAITKADVENKYYLAHAYNERFPELHLSCHDSAQSFFSEFMTSEKQAWRSIVRLSPSSMHHAAIDVRFKDGKRTMLVIEPALAYGMKDGEIKVMAGYETLGKNVQNCLGENGDMAVIQLGAQKSLFDCVIFSLNMALCAYQKDSVFDNLHDCLRRNVRCFSSGERKSILHKNIEFIEGDKFLPPIFYKHSHSRGVVGEFISNQPEYAHKNVSTGRTNPSEDLSERVENFRVRRGDLSYSMSIEASRLRKIRKTIES
SIO_010081: PJW04_RS22065
subclass of: SO_0000673
so part of: PJW04_RS22065
location: complement(34062..35114)
location: region:34062-35114:-1
so has part: feature:34062-35114:-1:exon

WP_074052319.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:34062-35114:-1:exon

PJW04_RS22070
type: Gene
subclass of: SO_0000704
RO_0002162: 442694
locus tag: PJW04_RS22070
old locus tag: PJW04_22070
pseudo: true
so part of: sequence
location: complement(<35171..35347)
location: region:35171-35347:-1
so has part: feature:35171-35347:-1:exon
subclass of: SO_0000010

79909890
type: Gene
SIO_000068: ncbigene

position:35171:-1
position: 35171
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

position:35347:-1
position: 35347
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:35171-35347:-1:exon

PJW04_RS22070
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 442694
locus tag: PJW04_RS22070
old locus tag: PJW04_22070
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011347479.1
note: incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: avirulence protein
SIO_010081: PJW04_RS22070
subclass of: SO_0000673
so part of: PJW04_RS22070
location: complement(<35171..35347)
location: region:35171-35347:-1
so has part: feature:35171-35347:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:35171-35347:-1:exon

PJW04_RS22075
type: Gene
subclass of: SO_0000704
RO_0002162: 442694
locus tag: PJW04_RS22075
old locus tag: PJW04_22075
pseudo: true
so part of: sequence
location: complement(35480..>35752)
location: region:35480-35752:-1
so has part: feature:35480-35752:-1:exon
subclass of: SO_0000010

79909891
type: Gene
SIO_000068: ncbigene

position:35480:-1
position: 35480
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:35752:-1
position: 35752
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:35480-35752:-1:exon

PJW04_RS22075
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 442694
locus tag: PJW04_RS22075
old locus tag: PJW04_22075
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017158590.1
note: incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: transposase
SIO_010081: PJW04_RS22075
subclass of: SO_0000673
so part of: PJW04_RS22075
location: complement(35480..>35752)
location: region:35480-35752:-1
so has part: feature:35480-35752:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:35480-35752:-1:exon

PJW04_RS22080
type: Gene
subclass of: SO_0000704
RO_0002162: 442694
locus tag: PJW04_RS22080
old locus tag: PJW04_22080
so part of: sequence
location: 36156..37243
location: region:36156-37243:1
so has part: feature:36156-37243:1:exon
subclass of: SO_0000010

79909892
type: Gene
SIO_000068: ncbigene

position:36156:1
position: 36156
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:37243:1
position: 37243
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:36156-37243:1:exon

PJW04_RS22080
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 442694
locus tag: PJW04_RS22080
old locus tag: PJW04_22080
inference: COORDINATES: similar to AA sequence:RefSeq:WP_076611493.1
ribosomal slippage: true
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: programmed frameshift; Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: IS3 family transposase
translation: MKKSRFTDSQIIAVLKQAQAGAPVPELCREHGISSATFYKWRSKFGGMDVSMVARMKELEEENRRLKKMYAEAQLSTDLLKEALGKKMVRPSQRREMAQSAVTSGRTNIRHACQTFAVSQTCFRYQAKASEQNARIADWLIRLTTAHRDWGFGLCYLYLRNVKGFGWNHKRIYRIYRELELNLRIKPKKRLVRERPQPLAVPETINQVWSMDFMQDQLADGRSFRLFNVLDDFNREGLGIEVDLSLPSARVIRSLEQIIEWRGKPAVIRCDNGPEYISGALLSWAQRHGIRVEHIQPGKPQQNAYVERYNRTIRYAWLAQTLFDTIDQVQDKATRWLWTYNHERPNMALGGITPAMKLAMAA
SIO_010081: PJW04_RS22080
subclass of: SO_0000673
so part of: PJW04_RS22080
location: join(36156..36408,36408..37243)
location: region:36156-37243:1
so has part: feature:36156-36408:1:exon
so has part: feature:36408-37243:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:36156-36408:1:exon

position:36408:1
position: 36408
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:36408-37243:1:exon

PJW04_RS22085
type: Gene
subclass of: SO_0000704
RO_0002162: 442694
locus tag: PJW04_RS22085
old locus tag: PJW04_22085
so part of: sequence
location: 37434..37628
location: region:37434-37628:1
so has part: feature:37434-37628:1:exon
subclass of: SO_0000010

79909893
type: Gene
SIO_000068: ncbigene

position:37434:1
position: 37434
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:37628:1
position: 37628
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:37434-37628:1:exon

PJW04_RS22085
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 442694
locus tag: PJW04_RS22085
old locus tag: PJW04_22085
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MSSRLTPTPKATARPEPSGFPHRSGGYTLKLRTVPVAIDGEVTLIVRKREPRDKGEGENWNLPD
SIO_010081: PJW04_RS22085
subclass of: SO_0000673
so part of: PJW04_RS22085
location: 37434..37628
location: region:37434-37628:1
so has part: feature:37434-37628:1:exon

WP_005993571.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:37434-37628:1:exon

PJW04_RS22090
type: Gene
subclass of: SO_0000704
RO_0002162: 442694
locus tag: PJW04_RS22090
old locus tag: PJW04_22090
so part of: sequence
location: complement(37697..37852)
location: region:37697-37852:-1
so has part: feature:37697-37852:-1:exon
subclass of: SO_0000010

79909894
type: Gene
SIO_000068: ncbigene

position:37697:-1
position: 37697
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:37852:-1
position: 37852
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:37697-37852:-1:exon

PJW04_RS22090
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 442694
locus tag: PJW04_RS22090
old locus tag: PJW04_22090
inference: COORDINATES: similar to AA sequence:RefSeq:WP_005993569.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MQEQDVPDDECPMCGGVGGWPGLTEWVTCKPCKGTGKNMLPPPDAWADLDD
SIO_010081: PJW04_RS22090
subclass of: SO_0000673
so part of: PJW04_RS22090
location: complement(37697..37852)
location: region:37697-37852:-1
so has part: feature:37697-37852:-1:exon

WP_005993569.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:37697-37852:-1:exon

PJW04_RS22095
type: Gene
subclass of: SO_0000704
RO_0002162: 442694
locus tag: PJW04_RS22095
old locus tag: PJW04_22095
so part of: sequence
location: 38210..38647
location: region:38210-38647:1
so has part: feature:38210-38647:1:exon
subclass of: SO_0000010

79909895
type: Gene
SIO_000068: ncbigene

position:38210:1
position: 38210
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:38647:1
position: 38647
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:38210-38647:1:exon

PJW04_RS22095
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 442694
locus tag: PJW04_RS22095
old locus tag: PJW04_22095
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017160567.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MFTASDIIHTHTHTHTHTHTHTHTHTRADLIEDGDLVDVSTLAREAGFKVPVAVTRAVWADCVAWSQDDTKRKRVPQDEEGRLWDVLFMARNFAARNAQGNRVPFALHRVPREGKGHQARIVTLHMHIGGDNGEPVITIMQPTED
SIO_010081: PJW04_RS22095
subclass of: SO_0000673
so part of: PJW04_RS22095
location: 38210..38647
location: region:38210-38647:1
so has part: feature:38210-38647:1:exon

WP_046933941.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:38210-38647:1:exon

PJW04_RS22100
type: Gene
subclass of: SO_0000704
RO_0002162: 442694
locus tag: PJW04_RS22100
old locus tag: PJW04_22100
so part of: sequence
location: 38717..38914
location: region:38717-38914:1
so has part: feature:38717-38914:1:exon
subclass of: SO_0000010

79909896
type: Gene
SIO_000068: ncbigene

position:38717:1
position: 38717
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:38914:1
position: 38914
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:38717-38914:1:exon

PJW04_RS22100
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 442694
locus tag: PJW04_RS22100
old locus tag: PJW04_22100
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017113440.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MDQAKTTQQIHCVSVDAGLRQARAVLAELTDFVRSTPCLCCPALLPLPAIQCERCRLLDRVGGAA
SIO_010081: PJW04_RS22100
subclass of: SO_0000673
so part of: PJW04_RS22100
location: 38717..38914
location: region:38717-38914:1
so has part: feature:38717-38914:1:exon

WP_228903369.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:38717-38914:1:exon

PJW04_RS22105
type: Gene
subclass of: SO_0000704
RO_0002162: 442694
locus tag: PJW04_RS22105
old locus tag: PJW04_22105
so part of: sequence
location: 38911..39150
location: region:38911-39150:1
so has part: feature:38911-39150:1:exon
subclass of: SO_0000010

79909897
type: Gene
SIO_000068: ncbigene

position:38911:1
position: 38911
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:39150:1
position: 39150
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:38911-39150:1:exon

PJW04_RS22105
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 442694
locus tag: PJW04_RS22105
old locus tag: PJW04_22105
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017113441.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MTAADNVRALIADHRRHERACRVHAARLRREAQQLRELPAGGARSLFRAHELARKAIALTEQADSDSAAAALLATTPQH
SIO_010081: PJW04_RS22105
subclass of: SO_0000673
so part of: PJW04_RS22105
location: 38911..39150
location: region:38911-39150:1
so has part: feature:38911-39150:1:exon

WP_017113441.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:38911-39150:1:exon

PJW04_RS22110
type: Gene
subclass of: SO_0000704
RO_0002162: 442694
locus tag: PJW04_RS22110
old locus tag: PJW04_22110
so part of: sequence
location: 39164..39757
location: region:39164-39757:1
so has part: feature:39164-39757:1:exon
subclass of: SO_0000010

79909898
type: Gene
SIO_000068: ncbigene

position:39164:1
position: 39164
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:39757:1
position: 39757
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:39164-39757:1:exon

PJW04_RS22110
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 442694
locus tag: PJW04_RS22110
old locus tag: PJW04_22110
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017164699.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MHKLPNPASLTAAERAELRDAIAGPRYAQQPHDLADGSRYYIAEEAGRIVVTKFHGKALKPDRAWFRSQAAAEQDIASFTTRRQQLADAQAERRAEAKRPHTLTVGAVLVSSYGYEQTNVDFYEVVAVQNRTVTLRELVQQRQDTGHMSGTAIPVPGQYTKAEPIRKRVNPRNGVKLSSSSYAHPWDGRPQYWSSYA
SIO_010081: PJW04_RS22110
subclass of: SO_0000673
so part of: PJW04_RS22110
location: 39164..39757
location: region:39164-39757:1
so has part: feature:39164-39757:1:exon

WP_017160566.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:39164-39757:1:exon

PJW04_RS22115
type: Gene
subclass of: SO_0000704
RO_0002162: 442694
locus tag: PJW04_RS22115
old locus tag: PJW04_22115
so part of: sequence
location: 39813..40040
location: region:39813-40040:1
so has part: feature:39813-40040:1:exon
subclass of: SO_0000010

79909899
type: Gene
SIO_000068: ncbigene

position:39813:1
position: 39813
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:40040:1
position: 40040
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:39813-40040:1:exon

PJW04_RS22115
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 442694
locus tag: PJW04_RS22115
old locus tag: PJW04_22115
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017163878.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MKLRHSLLYAIRHHFVFLVLSCALVGMGIYGFATFEPTSPNAAFSSPISDNAWLIYLVGVVCGLGGLLWIAHKSR
SIO_010081: PJW04_RS22115
subclass of: SO_0000673
so part of: PJW04_RS22115
location: 39813..40040
location: region:39813-40040:1
so has part: feature:39813-40040:1:exon

WP_005993906.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:39813-40040:1:exon

PJW04_RS22120
type: Gene
subclass of: SO_0000704
RO_0002162: 442694
locus tag: PJW04_RS22120
old locus tag: PJW04_22120
so part of: sequence
location: 40259..40603
location: region:40259-40603:1
so has part: feature:40259-40603:1:exon
subclass of: SO_0000010

79909900
type: Gene
SIO_000068: ncbigene

position:40259:1
position: 40259
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:40603:1
position: 40603
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:40259-40603:1:exon

PJW04_RS22120
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 442694
locus tag: PJW04_RS22120
old locus tag: PJW04_22120
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017113444.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MDKPRSNAAPARTGSYPSAHAGLLLHVRHQVENGEPQFGVHLAPHVGDVSGPAYCTVRGVAALNVFVCSPAAVSADLAALVVAEGHYVLPLAAAAQLAADFALPVRTPPVIEGA
SIO_010081: PJW04_RS22120
subclass of: SO_0000673
so part of: PJW04_RS22120
location: 40259..40603
location: region:40259-40603:1
so has part: feature:40259-40603:1:exon

WP_005993909.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:40259-40603:1:exon

PJW04_RS22125
type: Gene
subclass of: SO_0000704
RO_0002162: 442694
locus tag: PJW04_RS22125
old locus tag: PJW04_22125
so part of: sequence
location: 40715..41299
location: region:40715-41299:1
so has part: feature:40715-41299:1:exon
subclass of: SO_0000010

79909901
type: Gene
SIO_000068: ncbigene

position:40715:1
position: 40715
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:41299:1
position: 41299
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:40715-41299:1:exon

PJW04_RS22125
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 442694
locus tag: PJW04_RS22125
old locus tag: PJW04_22125
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017113443.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF6012 family protein
translation: MLIHLSPRLLEPKGIPTRCELVDIAIDPFGLLLRNGVEVVARRPYPNKRYQVACRKIGRMAINGLLIEAAGTVDAFRVVTRWAVEGEILCTHEVNYSLADQDHDAVSEDVLFCKRQAAQVYHQPRMAVLGSDCIAGDAGVSSVTSTEFISVSGPVVTGCRQQLRLSTMTRARLFDPMFVSRRIPPADHAFRVQR
SIO_010081: PJW04_RS22125
subclass of: SO_0000673
so part of: PJW04_RS22125
location: 40715..41299
location: region:40715-41299:1
so has part: feature:40715-41299:1:exon

WP_017160564.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:40715-41299:1:exon

PJW04_RS22130
type: Gene
subclass of: SO_0000704
RO_0002162: 442694
locus tag: PJW04_RS22130
old locus tag: PJW04_22130
so part of: sequence
location: 41654..42475
location: region:41654-42475:1
so has part: feature:41654-42475:1:exon
subclass of: SO_0000010

79909902
type: Gene
SIO_000068: ncbigene

position:41654:1
position: 41654
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:42475:1
position: 42475
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:41654-42475:1:exon

PJW04_RS22130
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 442694
locus tag: PJW04_RS22130
old locus tag: PJW04_22130
inference: COORDINATES: similar to AA sequence:RefSeq:WP_007968746.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MPAVDTGPHAQGPEPTAPSGRPHKRVHWRQPKPPSGKKRRPAVLDATREALVRSLEQRRGSLWMRISRNVIVAGYALEKALTRVRALRSDGAESLLAMSVALLYLADVRTGFVGKPRQGGGPWQRYTLKDLAQLAYGGQTVAELERAKRSIDMMVSLGWAFPTKQVRRHTKDAEGAAVWCSEPGVRRLNFQRLCDMAGTSWLLKRDRKHADQARGIGVASFAQAHARRQPPQKPGVTPRTDAARPAAHRATGDPPGDAQSAVRHISDILALFN
SIO_010081: PJW04_RS22130
subclass of: SO_0000673
so part of: PJW04_RS22130
location: 41654..42475
location: region:41654-42475:1
so has part: feature:41654-42475:1:exon

WP_074038430.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:41654-42475:1:exon

PJW04_RS22135
type: Gene
subclass of: SO_0000704
RO_0002162: 442694
locus tag: PJW04_RS22135
old locus tag: PJW04_22135
so part of: sequence
location: complement(43650..>43915)
location: region:43650-43915:-1
so has part: feature:43650-43915:-1:exon
subclass of: SO_0000010

79909903
type: Gene
SIO_000068: ncbigene

position:43650:-1
position: 43650
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:43915:-1
position: 43915
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:43650-43915:-1:exon

PJW04_RS22135
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 442694
locus tag: PJW04_RS22135
old locus tag: PJW04_22135
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 3
transl table: 11
product: hypothetical protein
translation: KKKNSIIILTRQADFAVDCMPFVGTWADRLRGQQGITHAAATMLRHRHGVAMGQGRRRRGSEGRTWSKVQTKKTAPVARRRCVSLTG
SIO_010081: PJW04_RS22135
subclass of: SO_0000673
so part of: PJW04_RS22135
location: complement(43650..>43915)
location: region:43650-43915:-1
so has part: feature:43650-43915:-1:exon

WP_271412322.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:43650-43915:-1:exon