Paenibacillus durus strain DSM 1735 plasmid unnamed, complete sequence.
Paenibacillus durus (Paenibacillus azotofixans)
Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.
Comparative genomics of the Paenibacillus odorifer group
Submitted (28-AUG-2014) Food Science, Cornell University, Stocking hall, Ithaca, NY 14853, USA
REFSEQ INFORMATION: The reference sequence is identical to\nCP009289.1.\nThe annotation was added by the NCBI Prokaryotic Genome Annotation\nPipeline (PGAP). Information about PGAP can be found here:\nhttps://www.ncbi.nlm.nih.gov/genome/annotation_prok/\n\n##Assembly-Data-START##\nAssembly Method :: HGAP, Quiver (SMRT analysis) v. 2.2\nCoverage :: 107x\nSequencing Technology :: PacBio\n##Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI RefSeq\nAnnotation Date :: 12/18/2022 13:32:36\nAnnotation Pipeline :: NCBI Prokaryotic Genome\n Annotation Pipeline (PGAP)\nAnnotation Method :: Best-placed reference protein\n set; GeneMarkS-2+\nAnnotation Software revision :: 6.3\nFeatures Annotated :: Gene; CDS; rRNA; tRNA; ncRNA\nGenes (total) :: 5,465\nCDSs (total) :: 5,351\nGenes (coding) :: 5,263\nCDSs (with protein) :: 5,263\nGenes (RNA) :: 114\nrRNAs :: 9, 9, 9 (5S, 16S, 23S)\ncomplete rRNAs :: 9, 9, 9 (5S, 16S, 23S)\ntRNAs :: 83\nncRNAs :: 4\nPseudo Genes (total) :: 88\nCDSs (without protein) :: 88\nPseudo Genes (ambiguous residues) :: 0 of 88\nPseudo Genes (frameshifted) :: 30 of 88\nPseudo Genes (incomplete) :: 62 of 88\nPseudo Genes (internal stop) :: 15 of 88\nPseudo Genes (multiple problems) :: 17 of 88\nCRISPR Arrays :: 5\n##Genome-Annotation-Data-END##\nCOMPLETENESS: full length.
COORDINATES: ab initio prediction:GeneMarkS-2+
Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
COORDINATES: similar to AA sequence:RefSeq:WP_001048511.1
Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: protein motif:HMM:NF024803.2
COORDINATES: similar to AA sequence:RefSeq:WP_010349901.1
COORDINATES: similar to AA sequence:RefSeq:WP_014141391.1
COORDINATES: protein motif:HMM:NF012234.2
GO:0005524 - ATP binding [Evidence IEA]; GO:0016887 - ATP hydrolysis activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_018931352.1
COORDINATES: similar to AA sequence:RefSeq:WP_018931348.1