Methylorubrum populi BJ001 plasmid pMPOP01, complete sequence.
type: Entry
definition: Methylorubrum populi BJ001 plasmid pMPOP01, complete sequence.
sequence version: NC_010727.1
sequence date: 2023-03-24
sequence: sequence
division: CON
label: NC_010727.1
type: RefSeq
SIO_000068: refseq
dblink: PRJNA224116
dblink: SAMN00000038
keyword: RefSeq
source: Methylorubrum populi BJ001
organism: Methylorubrum populi BJ001
taxonomy: Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales; Methylobacteriaceae; Methylorubrum.
reference: 1
references: 22887658
reference: 2
reference: 3
comment: REFSEQ INFORMATION: The reference sequence is identical to\nCP001030.1.\nURL -- http://www.jgi.doe.gov\nJGI Project ID: 4003782\nSource DNA and bacteria available from Christopher Marx\n(cmarx@oeb.harvard.edu)\nContacts: Christopher Marx (cmarx@oeb.harvard.edu)\n Paul Richardson (microbes@cuba.jgi-psf.org)\nQuality assurance done by JGI-Stanford\nAnnotation done by JGI-ORNL and JGI-PGF\nFinishing done by JGI-LANL\nFinished microbial genomes have been curated to close all gaps with\ngreater than 98% coverage of at least two independent clones. Each\nbase pair has a minimum q (quality) value of 30 and the total error\nrate is less than one per 50000.\nThe JGI and collaborators endorse the principles for the\ndistribution and use of large scale sequencing data adopted by the\nlarger genome sequencing community and urge users of this data to\nfollow them. it is our intention to publish the work of this\nproject in a timely fashion and we welcome collaborative\ninteraction on the project and analysis.\n(http://www.genome.gov/page.cfm?pageID=10506376).\nThe annotation was added by the NCBI Prokaryotic Genome Annotation\nPipeline (PGAP). Information about PGAP can be found here:\nhttps://www.ncbi.nlm.nih.gov/genome/annotation_prok/\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI RefSeq\nAnnotation Date :: 03/24/2023 13:06:10\nAnnotation Pipeline :: NCBI Prokaryotic Genome\n Annotation Pipeline (PGAP)\nAnnotation Method :: Best-placed reference protein\n set; GeneMarkS-2+\nAnnotation Software revision :: 6.4\nFeatures Annotated :: Gene; CDS; rRNA; tRNA; ncRNA\nGenes (total) :: 5,542\nCDSs (total) :: 5,467\nGenes (coding) :: 5,376\nCDSs (with protein) :: 5,376\nGenes (RNA) :: 75\nrRNAs :: 5, 5, 5 (5S, 16S, 23S)\ncomplete rRNAs :: 5, 5, 5 (5S, 16S, 23S)\ntRNAs :: 56\nncRNAs :: 4\nPseudo Genes (total) :: 91\nCDSs (without protein) :: 91\nPseudo Genes (ambiguous residues) :: 0 of 91\nPseudo Genes (frameshifted) :: 31 of 91\nPseudo Genes (incomplete) :: 72 of 91…

sequence
subclass of: SO_0000155
sequence length: 25164
topology: circular
so has quality: SO_0000988
location: 1..25164
location: region:1-25164:1
RO_0002162: 441620

NC_010727
type: RefSeq
SIO_000068: refseq

PRJNA224116
type: BioProject
SIO_000068: bioproject

SAMN00000038
type: BioSample
SIO_000068: biosample

1
title: Complete genome sequences of six strains of the genus Methylobacterium
author: Marx, C.J.
author: Bringel, F.
author: Chistoserdova, L.
author: Moulin, L.
author: Farhan Ul Haque, M.
author: Fleischman, D.E.
author: Gruffaz, C.
author: Jourand, P.
author: Knief, C.
author: Lee, M.C.
author: Muller, E.E.
author: Nadalig, T.
author: Peyraud, R.
author: Roselli, S.
author: Russ, L.
author: Goodwin, L.A.
author: Ivanova, N.
author: Kyrpides, N.
author: Lajus, A.
author: Land, M.L.
author: Medigue, C.
author: Mikhailova, N.
author: Nolan, M.
author: Woyke, T.
author: Stolyar, S.
author: Vorholt, J.A.
author: Vuilleumier, S.
journal: J Bacteriol
volume: 194
issue: 17
pages: 4746-4748
year: 2012
pubmed: 22887658

22887658
type: PubMed
SIO_000068: pubmed

2
title: Complete sequence of plamid1 of Methylobacterium populi BJ001
author: Copeland, A.
author: Lucas, S.
author: Lapidus, A.
author: Glavina del Rio, T.
author: Dalin, E.
author: Tice, H.
author: Bruce, D.
author: Goodwin, L.
author: Pitluck, S.
author: Chertkov, O.
author: Brettin, T.
author: Detter, J.C.
author: Han, C.
author: Kuske, C.R.
author: Schmutz, J.
author: Larimer, F.
author: Land, M.
author: Hauser, L.
author: Kyrpides, N.
author: Mikhailova, N.
author: Marx, C.
author: Richardson, P.
journal: Unpublished

3
title: Direct Submission
author: Copeland, A.
author: Lucas, S.
author: Lapidus, A.
author: Glavina del Rio, T.
author: Dalin, E.
author: Tice, H.
author: Bruce, D.
author: Goodwin, L.
author: Pitluck, S.
author: Chertkov, O.
author: Brettin, T.
author: Detter, J.C.
author: Han, C.
author: Kuske, C.R.
author: Schmutz, J.
author: Larimer, F.
author: Land, M.
author: Hauser, L.
author: Kyrpides, N.
author: Mikhailova, N.
author: Marx, C.
author: Richardson, P.
journal: Submitted (03-APR-2008) US DOE Joint Genome Institute, 2800 Mitchell Drive B100, Walnut Creek, CA 94598-1698, USA

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:25164:1
position: 25164
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-25164:1:source
so part of: sequence
organism: Methylorubrum populi BJ001
mol type: genomic DNA
strain: BJ001
type material: type strain of Methylorubrum populi
plasmid: pMPOP01
note: type strain of Methylobacterium populi

441620
type: Taxonomy
SIO_000068: taxonomy

MPOP_RS26805
type: Gene
subclass of: SO_0000704
RO_0002162: 441620
locus tag: MPOP_RS26805
old locus tag: Mpop_5419
pseudo: true
so part of: sequence
location: complement(52..1252)
location: region:52-1252:-1
so has part: feature:52-1252:-1:exon
subclass of: SO_0000010

position:52:-1
position: 52
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1252:-1
position: 1252
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:52-1252:-1:exon

MPOP_RS26805
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 441620
locus tag: MPOP_RS26805
old locus tag: Mpop_5419
inference: COORDINATES: similar to AA sequence:RefSeq:WP_020565969.1
note: frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: patatin-like phospholipase family protein
SIO_010081: MPOP_RS26805
subclass of: SO_0000673
so part of: MPOP_RS26805
location: complement(52..1252)
location: region:52-1252:-1
so has part: feature:52-1252:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:52-1252:-1:exon

MPOP_RS26810
type: Gene
subclass of: SO_0000704
RO_0002162: 441620
locus tag: MPOP_RS26810
old locus tag: Mpop_5420
so part of: sequence
location: complement(1298..2704)
location: region:1298-2704:-1
so has part: feature:1298-2704:-1:exon
subclass of: SO_0000010

position:1298:-1
position: 1298
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2704:-1
position: 2704
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1298-2704:-1:exon

MPOP_RS26810
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 441620
locus tag: MPOP_RS26810
old locus tag: Mpop_5420
inference: COORDINATES: similar to AA sequence:RefSeq:WP_020096399.1
GO function: GO:0020037 - heme binding [Evidence IEA]; GO:0005506 - iron ion binding [Evidence IEA]; GO:0016705 - oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: cytochrome P450
translation: MGDDTLFAQVLDPRNRPDPYPLYGRLRETPVSRQADGSFVVSTHAAVRSLIFDPRLSSEDLPPSRRPPTGNPLRDWILNPIRNRVVNAHRPLIFRDPPDHDTLRDFVMKEFTIARVRESHAKVARLVDTLIDACRGRDTVCLVDDLSYPLPVAVICELLGVPEADEAQFHAWAIRLATALEPDARHDEAGRREITATFDAISDYMRRLIREKRRRPADDMLSGLAARGGQGRPAMGDIDLISTAILLLVAGHETTVNLITNGMLTLLRHPDELERLKVDPARAPRVIEEMLRYEPPVHFRTRKALGAIDVAGVTIPAGSPVILLFASASRDPARFADADRFDPDRRDNQHFGFGGGLHYCAGAPLARIEAEIALVTLCRRLVAPRLLDDPPPYRPGASLRGPKNLGTSASGLYLFFYYLGGLAGTAVLGQVFERWGWGACVLGVAASLALAAALTLGLREPSSARGVT
SIO_010081: MPOP_RS26810
subclass of: SO_0000673
so part of: MPOP_RS26810
location: complement(1298..2704)
location: region:1298-2704:-1
so has part: feature:1298-2704:-1:exon

WP_012457135.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1298-2704:-1:exon

MPOP_RS26815
type: Gene
subclass of: SO_0000704
RO_0002162: 441620
locus tag: MPOP_RS26815
old locus tag: Mpop_5421
so part of: sequence
location: complement(2697..4052)
location: region:2697-4052:-1
so has part: feature:2697-4052:-1:exon
subclass of: SO_0000010

position:2697:-1
position: 2697
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4052:-1
position: 4052
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2697-4052:-1:exon

MPOP_RS26815
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 441620
locus tag: MPOP_RS26815
old locus tag: Mpop_5421
inference: COORDINATES: protein motif:HMM:NF019604.2
GO function: GO:0016491 - oxidoreductase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: FAD-dependent oxidoreductase
translation: MPAHGPSASRTDCSGSASAFRRLTEPKNETDLASAAAYGTACDRPIVGDEPHRPYDRPPLSKHVLAGELAPEATELPQLRSLRARWRLGQPAVALDRERRVVRLADGATLPYETLLIATGARARTWPGEGADLAGIFTIRTVEDARSLRNALAQRPGRVLVVGAGLIGCEAASCCRDLGLDVTLVDPNPTPLARLLGTVIGGTLAGRMRDAGVDIRMNTKIHSFSGEKGGVRRAHLPGGATIATDLVIVALGATRETGWLAAAGLRADAGGLTCDAACRAMTLAGELDPAIYAAGDVARWPNPLTGNRPMTVEHWGNAVDQARHAAANMLARPSEQPPYGHLPAFWSSQFGLNIKLVGLTEGADALAVVQGARASQRFLAVYGRAGRSVAAVSFDQARWLPAYAEAVAAGSAFPPILGATDQPRIEWLEPGFPVPRRSTDQAAPTLEAAHG
SIO_010081: MPOP_RS26815
subclass of: SO_0000673
so part of: MPOP_RS26815
location: complement(2697..4052)
location: region:2697-4052:-1
so has part: feature:2697-4052:-1:exon

WP_012457136.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2697-4052:-1:exon

MPOP_RS26820
type: Gene
subclass of: SO_0000704
RO_0002162: 441620
locus tag: MPOP_RS26820
old locus tag: Mpop_5422
so part of: sequence
location: complement(3973..4725)
location: region:3973-4725:-1
so has part: feature:3973-4725:-1:exon
subclass of: SO_0000010

position:3973:-1
position: 3973
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4725:-1
position: 4725
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3973-4725:-1:exon

MPOP_RS26820
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 441620
locus tag: MPOP_RS26820
old locus tag: Mpop_5422
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012457137.1
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: IS6-like element ISMpo1 family transposase
translation: MILSAIAAKLKQRAKADFKGRHYEAALIVQAVSWYLRYPLSYRDIEELFLERGMDVDHSTLNRWVLAYAPLIEKRLRQFRKPHCGSVRIDETYIKVRGEWRYLYRAVDKHGNPVDFLLTANRDLDAAKRFFRKMLQDQPLLAPDRIGTDGAGTYPPAILAARNDGLLPRAPLHYVTKHLQQGIESDHFRVKKNMPRIGGFQSFRTARRTIQGFEAMLWLRKGFGFAGAWTIREQNRLLGVCFGLQAVNRA
SIO_010081: MPOP_RS26820
subclass of: SO_0000673
so part of: MPOP_RS26820
location: complement(3973..4725)
location: region:3973-4725:-1
so has part: feature:3973-4725:-1:exon

WP_012457137.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3973-4725:-1:exon

MPOP_RS26825
type: Gene
subclass of: SO_0000704
RO_0002162: 441620
locus tag: MPOP_RS26825
old locus tag: Mpop_5423
so part of: sequence
location: 4966..5442
location: region:4966-5442:1
so has part: feature:4966-5442:1:exon
subclass of: SO_0000010

position:4966:1
position: 4966
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5442:1
position: 5442
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4966-5442:1:exon

MPOP_RS26825
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 441620
locus tag: MPOP_RS26825
old locus tag: Mpop_5423
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010339850.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF417 family protein
translation: MFSTLHIAEKTTGSRGSLALLRWALVVIFLWFGCMKFTSYEAMGIAPLMKNSPIMSWIPAVFGVQGGSYFIGTVELATAAALIIGAFNKTASALGAAMSCLTYAVTLTFFLSTPGVAEPTAGGFPAISAGTGQFLLKDLVLLAASACLLLASIRTADA
SIO_010081: MPOP_RS26825
subclass of: SO_0000673
so part of: MPOP_RS26825
location: 4966..5442
location: region:4966-5442:1
so has part: feature:4966-5442:1:exon

WP_010339850.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4966-5442:1:exon

MPOP_RS26830
type: Gene
subclass of: SO_0000704
RO_0002162: 441620
locus tag: MPOP_RS26830
old locus tag: Mpop_5424
so part of: sequence
location: 5576..6160
location: region:5576-6160:1
so has part: feature:5576-6160:1:exon
subclass of: SO_0000010

position:5576:1
position: 5576
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6160:1
position: 6160
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5576-6160:1:exon

MPOP_RS26830
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 441620
locus tag: MPOP_RS26830
old locus tag: Mpop_5424
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010339849.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: recombinase family protein
translation: MLVGYMRVSTTDDRQTVDLQRDALVATGVDHRHLHTDKASGARDDRPGLKACLDYLNAGDTLIVWKLDRLGRSLPHLLTIVTDLKARGIAFRSLTEQMDTTTPHGELLFSLFGALAQYERALTRERVMAGLAAAKRRGRQGGRPPMIDAETLERITAALDGGASKASVCRTFKVPRSTLLGTLARIGWTAPAKV
SIO_010081: MPOP_RS26830
subclass of: SO_0000673
so part of: MPOP_RS26830
location: 5576..6160
location: region:5576-6160:1
so has part: feature:5576-6160:1:exon

WP_010339849.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:5576-6160:1:exon

MPOP_RS26835
type: Gene
subclass of: SO_0000704
RO_0002162: 441620
locus tag: MPOP_RS26835
old locus tag: Mpop_5425
so part of: sequence
location: 6165..9143
location: region:6165-9143:1
so has part: feature:6165-9143:1:exon
subclass of: SO_0000010

position:6165:1
position: 6165
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9143:1
position: 9143
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6165-9143:1:exon

MPOP_RS26835
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 441620
locus tag: MPOP_RS26835
old locus tag: Mpop_5425
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012449407.1
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: Tn3-like element ISMpo10 family transposase
translation: MPRRAVLSDEQRAALLALPDDETLLVQHWTLSRDDLAIIVRRRRPHNRLGFAIQLCALRYPGRFLRPGELIPDTPLAFVAEQLQVGPEVLADYATRGPTRYEQLDALRDAFGFMPLSRPLRTTLQEWLLPIALTTTSGARLARVMLDECRRRRIIVPGISSVERMVAQALLDAERHVAEHLTRGLDARQRRLLDALLLPHTGTNLSDLAWVRQSPGKPGRKTFAAIIERLTLLRAIGIDPDIAVGVHPERLRRLCQEGVRLTAQHVRTLQATRRRATLVATILETIVTLTDDAVLMFDRLLGQMFRREQNSADTTLKRNRRTINGKIRLLAQLGAALLAAKISGGDIGAAVEAAIGWNDLGREVDEARKLIRPDSVDPVAVAATNYPVLRQVGPSFIASFTFGAVPACHALARAVAIMRDLHFGHLRKLPAGTPVGFIRQAWRRAIGTGIPDRRIYELCVLVELRDRLRAGDMWVEGSRRYRAVEQQLIPAPVFANMRAAGPLPIPAPDTADIWLAERRARLARRLAEVERKAETDALEDVQLSLGRLRISPLKAITPEESDTALAPLYAHLPAIRITDLLAEVDRWTGFSQCFTHLQSGRAADEPRAILTAVLADATNLGHTRMAEACNLVTQRQLGWLASWHLREETYGRALARLVDAQHTAPLAALFGSGTSSSSDGQNFPLDRRAQATGAVNPHKGTEPAVSFYSHVSDRYAPFHSTVISASASEAAQVLDGLLHHGADLHIEEHHVDGGGVSDHVFALCHLLGFRFAPRIPNIAARRLHLFNGIEPGPDIAPLVAGRIDEGLIEAHWDDVLRLGTSIRTGVVSASIMLERLGSYPRANGLALALREIGRVERTLFTLDWIEQPEQRRRATRELNKGEAENALKRAIFFHRIGRIRDHALQAQSHRASALNLVAGAIVLWNTTYLQAARMHLANLGRPVPPDLLQHLSPLGWQHINLTGDYLWTDPDAPSTALRPLRQMRAVEGTAKP
SIO_010081: MPOP_RS26835
subclass of: SO_0000673
so part of: MPOP_RS26835
location: 6165..9143
location: region:6165-9143:1
so has part: feature:6165-9143:1:exon

WP_012449407.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:6165-9143:1:exon

MPOP_RS26840
type: Gene
subclass of: SO_0000704
RO_0002162: 441620
locus tag: MPOP_RS26840
old locus tag: Mpop_5426
so part of: sequence
location: 9180..9545
location: region:9180-9545:1
so has part: feature:9180-9545:1:exon
subclass of: SO_0000010

position:9180:1
position: 9180
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9545:1
position: 9545
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9180-9545:1:exon

MPOP_RS26840
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 441620
locus tag: MPOP_RS26840
old locus tag: Mpop_5426
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MRADDVVVLNEVGSLLHEGVEGRFHFDAARLKTATIRQLFGIRRNDGRWAYDAAQVRVTAAVQNIVQGALLAFVFVGIPFLLLGLLQLIYSIGTARLRHDEFFGSEDQGGSSTRQSEVIRI
SIO_010081: MPOP_RS26840
subclass of: SO_0000673
so part of: MPOP_RS26840
location: 9180..9545
location: region:9180-9545:1
so has part: feature:9180-9545:1:exon

WP_041372211.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:9180-9545:1:exon

MPOP_RS26845
type: Gene
subclass of: SO_0000704
RO_0002162: 441620
locus tag: MPOP_RS26845
old locus tag: Mpop_5427
so part of: sequence
location: 9542..10015
location: region:9542-10015:1
so has part: feature:9542-10015:1:exon
subclass of: SO_0000010

position:9542:1
position: 9542
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:10015:1
position: 10015
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9542-10015:1:exon

MPOP_RS26845
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 441620
locus tag: MPOP_RS26845
old locus tag: Mpop_5427
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MTVRAASLRQVMCRRFGFGKARGIGTACIPLILTSQAVLAAGADFTRMRAFDAQYAYLDVPAGAPAQDWIEIQARRRGNGWIIEAVGSNPRLAASVRTCRKVFSGRTVGPGRIRATDPSGEFGTFELRREGAYARLVPLSAGDCAREGLYLIPTVQD
SIO_010081: MPOP_RS26845
subclass of: SO_0000673
so part of: MPOP_RS26845
location: 9542..10015
location: region:9542-10015:1
so has part: feature:9542-10015:1:exon

WP_012457139.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:9542-10015:1:exon

MPOP_RS26850
type: Gene
subclass of: SO_0000704
RO_0002162: 441620
gene: ihfB
locus tag: MPOP_RS26850
old locus tag: Mpop_5428
so part of: sequence
location: complement(10351..10701)
location: region:10351-10701:-1
so has part: feature:10351-10701:-1:exon
subclass of: SO_0000010

position:10351:-1
position: 10351
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:10701:-1
position: 10701
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:10351-10701:-1:exon

MPOP_RS26850
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 441620
gene: ihfB
locus tag: MPOP_RS26850
old locus tag: Mpop_5428
inference: COORDINATES: similar to AA sequence:RefSeq:WP_018043161.1
GO function: GO:0003677 - DNA binding [Evidence IEA]
GO process: GO:0006310 - DNA recombination [Evidence IEA]; GO:0075713 - establishment of integrated proviral latency [Evidence IEA]; GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]; GO:0006417 - regulation of translation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: integration host factor subunit beta
translation: MHDVDHRCRGLAPRRPAWSVTGMIKSELILRLVEQNPHLYARDVEAVVNTILETITAAMERGDRVELRGFGAFSVKHREARQGRNPRSGAAVAVEAKTAPVFRPGKELRLKLQDET
SIO_010081: MPOP_RS26850
subclass of: SO_0000673
so part of: MPOP_RS26850
location: complement(10351..10701)
location: region:10351-10701:-1
so has part: feature:10351-10701:-1:exon

WP_276325581.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:10351-10701:-1:exon

MPOP_RS26855
type: Gene
subclass of: SO_0000704
RO_0002162: 441620
locus tag: MPOP_RS26855
old locus tag: Mpop_5429
so part of: sequence
location: 11365..12129
location: region:11365-12129:1
so has part: feature:11365-12129:1:exon
subclass of: SO_0000010

position:11365:1
position: 11365
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:12129:1
position: 12129
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11365-12129:1:exon

MPOP_RS26855
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 441620
locus tag: MPOP_RS26855
old locus tag: Mpop_5429
inference: COORDINATES: similar to AA sequence:RefSeq:WP_009450361.1
GO function: GO:0016787 - hydrolase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: metallophosphoesterase
translation: MAKLWILPDLHLETLPYPDNSRPDPPGFDVLVAAGDIWEGDPGRGFAVLRRLAGDKPVVFVMGNHEHWNGFVDEDLALAPVLAARDGITLLDGGSATLVGYRFIGTTLWSDYRLAGQLDPATPTGEPIDIAHDDAGGSHLITIGDAAALHRRARAALSAEMDAHDGTQPLVVVTHHAPHPDCVAPAQRGTWNAGNSASDLSALTDSGRASLWVHGHVHHSLDLIRPGGTRLLCNPAGAGFANPAFDENRVIALA
SIO_010081: MPOP_RS26855
subclass of: SO_0000673
so part of: MPOP_RS26855
location: 11365..12129
location: region:11365-12129:1
so has part: feature:11365-12129:1:exon

WP_012457141.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:11365-12129:1:exon

MPOP_RS26860
type: Gene
subclass of: SO_0000704
RO_0002162: 441620
locus tag: MPOP_RS26860
old locus tag: Mpop_5430
so part of: sequence
location: complement(12217..12930)
location: region:12217-12930:-1
so has part: feature:12217-12930:-1:exon
subclass of: SO_0000010

position:12217:-1
position: 12217
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:12930:-1
position: 12930
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:12217-12930:-1:exon

MPOP_RS26860
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 441620
locus tag: MPOP_RS26860
old locus tag: Mpop_5430
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012753501.1
GO function: GO:0003700 - DNA-binding transcription factor activity [Evidence IEA]
GO process: GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: GntR family transcriptional regulator
translation: MSAPRAALPDVTAALWKAFAAGAVSEATAEELSGLIEARMALPITRAAAEGPEPLKAAPPRHVGSRPRTDASLERRRRWAASGRLPPALAARFSLAEQAVLALVAAESVRRKDCRLAVGNLAALAGVSETTVRNAIREAVRLGLLTVEERRITGWRNDTNVVRIVSAEWTAWLRLTRKRKEAAAAPVSEGGGCKSAKGTPTEVLSLWIPRPMEPSQRLPKGSERPSTQRAIRNRRGR
SIO_010081: MPOP_RS26860
subclass of: SO_0000673
so part of: MPOP_RS26860
location: complement(12217..12930)
location: region:12217-12930:-1
so has part: feature:12217-12930:-1:exon

WP_244409918.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:12217-12930:-1:exon

MPOP_RS26865
type: Gene
subclass of: SO_0000704
RO_0002162: 441620
locus tag: MPOP_RS26865
old locus tag: Mpop_5431
so part of: sequence
location: complement(13502..13792)
location: region:13502-13792:-1
so has part: feature:13502-13792:-1:exon
subclass of: SO_0000010

position:13502:-1
position: 13502
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:13792:-1
position: 13792
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:13502-13792:-1:exon

MPOP_RS26865
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 441620
locus tag: MPOP_RS26865
old locus tag: Mpop_5431
inference: COORDINATES: similar to AA sequence:RefSeq:WP_007566948.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: type II toxin-antitoxin system RelE/ParE family toxin
translation: MGSYQLTGRADADILDVFLYGLTEFGMAQAERYQGILEHTFQLLADNPRMGRAAEVIGAGVRRHECGAHVILYEEATDGVLILAVVHSRSVRRLSL
SIO_010081: MPOP_RS26865
subclass of: SO_0000673
so part of: MPOP_RS26865
location: complement(13502..13792)
location: region:13502-13792:-1
so has part: feature:13502-13792:-1:exon

WP_012457143.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:13502-13792:-1:exon

MPOP_RS26870
type: Gene
subclass of: SO_0000704
RO_0002162: 441620
locus tag: MPOP_RS26870
old locus tag: Mpop_5432
so part of: sequence
location: complement(13785..14054)
location: region:13785-14054:-1
so has part: feature:13785-14054:-1:exon
subclass of: SO_0000010

position:13785:-1
position: 13785
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:14054:-1
position: 14054
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:13785-14054:-1:exon

MPOP_RS26870
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 441620
locus tag: MPOP_RS26870
old locus tag: Mpop_5432
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010971678.1
GO process: GO:0051983 - regulation of chromosome segregation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: type II toxin-antitoxin system ParD family antitoxin
translation: MATMTISLPDPMKEWIEAQIRQGDYASTSDYVRDLVRRDRERRAHPELTIDDLRRIVDDSRASGISRRSISDIMAEAKEIASARGTSRG
SIO_010081: MPOP_RS26870
subclass of: SO_0000673
so part of: MPOP_RS26870
location: complement(13785..14054)
location: region:13785-14054:-1
so has part: feature:13785-14054:-1:exon

WP_012457144.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:13785-14054:-1:exon

MPOP_RS26875
type: Gene
subclass of: SO_0000704
RO_0002162: 441620
locus tag: MPOP_RS26875
old locus tag: Mpop_5433
so part of: sequence
location: 14313..14999
location: region:14313-14999:1
so has part: feature:14313-14999:1:exon
subclass of: SO_0000010

position:14313:1
position: 14313
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:14999:1
position: 14999
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:14313-14999:1:exon

MPOP_RS26875
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 441620
locus tag: MPOP_RS26875
old locus tag: Mpop_5433
inference: COORDINATES: similar to AA sequence:RefSeq:WP_009820269.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ParA family protein
translation: MPVIAFANPKGGAGKTTTALLLATELAAKGAAVTVIDADPERWISQWAKLPGKPGNVRIVADVTEESVVDAIEAAEEEAQFVIVDLEGTASLMVSNTIGMADLVVIPIQGSSMDAKGGAKMLRLIRNQEKMSRRKIAHAVVLTRTGAAVTSRALRNVAEQLRAGGIDIFATPIVERAAYRDLFDYGGTLAGLDGAQVSNLDKAIQNAREFAGEVVARLKAIAAERQAA
SIO_010081: MPOP_RS26875
subclass of: SO_0000673
so part of: MPOP_RS26875
location: 14313..14999
location: region:14313-14999:1
so has part: feature:14313-14999:1:exon

WP_012457145.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:14313-14999:1:exon

MPOP_RS28055
type: Gene
subclass of: SO_0000704
RO_0002162: 441620
locus tag: MPOP_RS28055
old locus tag: Mpop_5434
so part of: sequence
location: 14999..15364
location: region:14999-15364:1
so has part: feature:14999-15364:1:exon
subclass of: SO_0000010

position:15364:1
position: 15364
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:14999-15364:1:exon

MPOP_RS28055
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 441620
locus tag: MPOP_RS28055
old locus tag: Mpop_5434
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013480810.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MSVRERAPLGFGDELENFDPAAFAKPKRAANDRPKPEEAKKAAEAAGFRSREPIKAAAVPEEPAAPLRRRRTGRNVQFNIKTKAETIEAFTRIADANGWGLGETFERATELLERELATARN
SIO_010081: MPOP_RS28055
subclass of: SO_0000673
so part of: MPOP_RS28055
location: 14999..15364
location: region:14999-15364:1
so has part: feature:14999-15364:1:exon

WP_012457146.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:14999-15364:1:exon

MPOP_RS28610
type: Gene
subclass of: SO_0000704
RO_0002162: 441620
locus tag: MPOP_RS28610
so part of: sequence
location: complement(15473..15637)
location: region:15473-15637:-1
so has part: feature:15473-15637:-1:exon
subclass of: SO_0000010

position:15473:-1
position: 15473
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:15637:-1
position: 15637
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:15473-15637:-1:exon

MPOP_RS28610
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 441620
locus tag: MPOP_RS28610
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MTATRSPDPTAQHILRFCEMIVPGARPLLMPIRPSADSQPLDCFSNARQLAQVT
SIO_010081: MPOP_RS28610
subclass of: SO_0000673
so part of: MPOP_RS28610
location: complement(15473..15637)
location: region:15473-15637:-1
so has part: feature:15473-15637:-1:exon

WP_158022324.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:15473-15637:-1:exon

MPOP_RS26885
type: Gene
subclass of: SO_0000704
RO_0002162: 441620
locus tag: MPOP_RS26885
old locus tag: Mpop_5435
so part of: sequence
location: complement(15793..16230)
location: region:15793-16230:-1
so has part: feature:15793-16230:-1:exon
subclass of: SO_0000010

position:15793:-1
position: 15793
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:16230:-1
position: 16230
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:15793-16230:-1:exon

MPOP_RS26885
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 441620
locus tag: MPOP_RS26885
old locus tag: Mpop_5435
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012382806.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MPIRPHNRFFYPIDWVQLSEAIRFGRAKGCCEQCERPHGQLVFHLGDGRWWDADAQTWRSGKGRPLKLKPLECLPAGTVIETTRVYLACAHLDHDPGNNDPRNLKALCQRCHILHDRAEHLRQRQLTYRLRKALGDLFLGPYPLR
SIO_010081: MPOP_RS26885
subclass of: SO_0000673
so part of: MPOP_RS26885
location: complement(15793..16230)
location: region:15793-16230:-1
so has part: feature:15793-16230:-1:exon

WP_012457147.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:15793-16230:-1:exon

MPOP_RS26890
type: Gene
subclass of: SO_0000704
RO_0002162: 441620
locus tag: MPOP_RS26890
old locus tag: Mpop_5436
so part of: sequence
location: complement(16235..16816)
location: region:16235-16816:-1
so has part: feature:16235-16816:-1:exon
subclass of: SO_0000010

position:16235:-1
position: 16235
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:16816:-1
position: 16816
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:16235-16816:-1:exon

MPOP_RS26890
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 441620
locus tag: MPOP_RS26890
old locus tag: Mpop_5436
inference: COORDINATES: similar to AA sequence:RefSeq:WP_007558556.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: recombinase family protein
translation: MLVGYARVSTQDQNLDLQRDALQRAGCEQIFYEKKSGKAGTKRPEFEAMLAYLRPTDVLVVWKLDRLGRSLVEMMRTIDGLRIKEIHFRSLTEQFDSATAHGRFALQMHGAMAEYFLDLNRERTMEGLKAAVARGRKGGRPKKLSEADLEVGRALLAAGNISIAAIAKRLGVSRFTFYTYFPRARARSQKAKG
SIO_010081: MPOP_RS26890
subclass of: SO_0000673
so part of: MPOP_RS26890
location: complement(16235..16816)
location: region:16235-16816:-1
so has part: feature:16235-16816:-1:exon

WP_012457148.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:16235-16816:-1:exon

MPOP_RS26895
type: Gene
subclass of: SO_0000704
RO_0002162: 441620
locus tag: MPOP_RS26895
old locus tag: Mpop_5437
pseudo: true
so part of: sequence
location: complement(17132..>17608)
location: region:17132-17608:-1
so has part: feature:17132-17608:-1:exon
subclass of: SO_0000010

position:17132:-1
position: 17132
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:17608:-1
position: 17608
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:17132-17608:-1:exon

MPOP_RS26895
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 441620
locus tag: MPOP_RS26895
old locus tag: Mpop_5437
inference: COORDINATES: similar to AA sequence:RefSeq:WP_019906468.1
note: incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: FCD domain-containing protein
SIO_010081: MPOP_RS26895
subclass of: SO_0000673
so part of: MPOP_RS26895
location: complement(17132..>17608)
location: region:17132-17608:-1
so has part: feature:17132-17608:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:17132-17608:-1:exon

MPOP_RS26900
type: Gene
subclass of: SO_0000704
RO_0002162: 441620
locus tag: MPOP_RS26900
old locus tag: Mpop_5438
so part of: sequence
location: complement(17647..18399)
location: region:17647-18399:-1
so has part: feature:17647-18399:-1:exon
subclass of: SO_0000010

position:17647:-1
position: 17647
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:18399:-1
position: 18399
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:17647-18399:-1:exon

MPOP_RS26900
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 441620
locus tag: MPOP_RS26900
old locus tag: Mpop_5438
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012457137.1
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: IS6-like element ISMpo1 family transposase
translation: MILSAIAAKLKQRAKADFKGRHYEAALIVQAVSWYLRYPLSYRDIEELFLERGMDVDHSTLNRWVLAYAPLIEKRLRQFRKPHCGSVRIDETYIKVRGEWRYLYRAVDKHGNPVDFLLTANRDLDAAKRFFRKMLQDQPLLAPDRIGTDGAGTYPPAILAARNDGLLPRAPLHYVTKHLQQGIESDHFRVKKNMPRIGGFQSFRTARRTIQGFEAMLWLRKGFGFAGAWTIREQNRLLGVCFGLQAVNRA
SIO_010081: MPOP_RS26900
subclass of: SO_0000673
so part of: MPOP_RS26900
location: complement(17647..18399)
location: region:17647-18399:-1
so has part: feature:17647-18399:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:17647-18399:-1:exon

MPOP_RS26905
type: Gene
subclass of: SO_0000704
RO_0002162: 441620
gene: senA
locus tag: MPOP_RS26905
old locus tag: Mpop_5439
so part of: sequence
location: complement(18396..19640)
location: region:18396-19640:-1
so has part: feature:18396-19640:-1:exon
subclass of: SO_0000010

position:18396:-1
position: 18396
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:19640:-1
position: 19640
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:18396-19640:-1:exon

MPOP_RS26905
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 441620
gene: senA
locus tag: MPOP_RS26905
old locus tag: Mpop_5439
inference: COORDINATES: protein motif:HMM:NF041186.1
GO process: GO:1903257 - selenoneine biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: selenoneine synthase SenA
translation: MNAQVSAAGLVAMLQDARARTLELVAGLDRERLMGPQLDIVNPLLWEIGHLAWFHEHFILRGLDGQPPLMSEADGLYDSARVPHGTRWSIPLPPLVDTLAYMASVHDALVRRLAGREPTPQEAELYQLVTYHEDMHDEAFTYSRQTLGYPAPTFAVSTSARAAGSGPWPGDVPVSGGIWRLGSEPGDGFVFDNEKWAHPVPVTPFRIARAPVTNAEFAAFVTDGGYREAAYWDPEGAKWREGCRAEHPVYWTRRGAREWTVRRFDREEPLAPDQPVIHVNWHEANAYCRWAGRRLPTEAEWEAAAAGAPALPDTLSETKRAYPWGVEVPTPELANLDGGHLGCVDVAAHPEGDSAWGCRQMIGNVWEWTASPFLPFPGFAPDAYKEYGPVANPQRLPRVDHAARMVPPVPEATP
SIO_010081: MPOP_RS26905
subclass of: SO_0000673
so part of: MPOP_RS26905
location: complement(18396..19640)
location: region:18396-19640:-1
so has part: feature:18396-19640:-1:exon

WP_012457149.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:18396-19640:-1:exon

MPOP_RS26910
type: Gene
subclass of: SO_0000704
RO_0002162: 441620
gene: senB
locus tag: MPOP_RS26910
old locus tag: Mpop_5440
so part of: sequence
location: 19668..20633
location: region:19668-20633:1
so has part: feature:19668-20633:1:exon
subclass of: SO_0000010

position:19668:1
position: 19668
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:20633:1
position: 20633
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:19668-20633:1:exon

MPOP_RS26910
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 441620
gene: senB
locus tag: MPOP_RS26910
old locus tag: Mpop_5440
inference: COORDINATES: similar to AA sequence:RefSeq:WP_018231349.1
GO function: GO:0016757 - glycosyltransferase activity [Evidence IEA]
GO process: GO:0001887 - selenium compound metabolic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: selenoneine biosynthesis selenosugar synthase SenB
translation: MKISLITPAAKTSRAGNRTTAVRWARILGDLGHQVDVATTYEDDADADLMLALHAWRSSSSIARFKARHPERPLIVALTGTDIYHYLAADPEPTLRSLDLADRLIGLHDLVPAALPERHRQKVDVVFQSALPRRRRWAASEEAFEVLVIGHLRTEKDPFCAARAARRLPVRSHIRIVHLGGAHEEVWATRARAEMADNSRYLWLGDRPQSLVRRWLTRGRVMVLSSRQEGGANVVSEAIAAGLPVIASGIPGTIGLLGPAYPGYFPIGDDAALAGMLLRAEEDPQFLRALSNGGAARAYLFSPAQERESLRRVVVSISIEV
SIO_010081: MPOP_RS26910
subclass of: SO_0000673
so part of: MPOP_RS26910
location: 19668..20633
location: region:19668-20633:1
so has part: feature:19668-20633:1:exon

WP_012457150.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:19668-20633:1:exon

MPOP_RS26915
type: Gene
subclass of: SO_0000704
RO_0002162: 441620
locus tag: MPOP_RS26915
old locus tag: Mpop_5441
so part of: sequence
location: 21028..22569
location: region:21028-22569:1
so has part: feature:21028-22569:1:exon
subclass of: SO_0000010

position:21028:1
position: 21028
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:22569:1
position: 22569
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:21028-22569:1:exon

MPOP_RS26915
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 441620
locus tag: MPOP_RS26915
old locus tag: Mpop_5441
inference: COORDINATES: similar to AA sequence:RefSeq:WP_003600996.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: CYTH and CHAD domain-containing protein
translation: MTAPKEIELKLVCDASDLTILREHPRLRGAVGEERDQLNSVYFDTHDGRLREAGYVLRVRGTKDGYVQTAKGAGDGLLERSEWERPVEGPEPDRDALEGTPLAKLLGKNTKLAPMFTVAVERLAYHVEQGASRIEVALDQGRITQTAGKRASDAVTISEIELELKEGSPADLFDLAHEMCSQVSVRLGVRTKPERGFALIDGEPNGMRKAEPVLLLEEMTAADAFRSIAHACLRHMRLNEDVILERRDVGALHQTRVAIRRLRSAFSLFGDMIADGRSEAMRAALKRLSAPLGRARNLDVFLTRTLPAERARHPDEGGLLNLEKHLEAQRTEAYEAVRKTLASEEWRRFILELVAWINAGSWLTSGDDRDARRRDQPAIAFAAGVLEKRRRQVKKRGRDLESLNAEERHNVRIAAKKLRYGAEFFAGLYIDKKASKRHMAFVAALEDLQDSLGDLNDITTGHELLNELTEAGSGSALFAAGMTAADIEARATKLVASAAKAHEALIDVRPFWR
SIO_010081: MPOP_RS26915
subclass of: SO_0000673
so part of: MPOP_RS26915
location: 21028..22569
location: region:21028-22569:1
so has part: feature:21028-22569:1:exon

WP_012457151.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:21028-22569:1:exon

MPOP_RS29310
type: Gene
subclass of: SO_0000704
RO_0002162: 441620
locus tag: MPOP_RS29310
so part of: sequence
location: complement(22709..22864)
location: region:22709-22864:-1
so has part: feature:22709-22864:-1:exon
subclass of: SO_0000010

position:22709:-1
position: 22709
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:22864:-1
position: 22864
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:22709-22864:-1:exon

MPOP_RS29310
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 441620
locus tag: MPOP_RS29310
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MTLREALDAAGKAMAAEDVRTWIITEAGDILSPSWIEARVGTPLAGRRPHT
SIO_010081: MPOP_RS29310
subclass of: SO_0000673
so part of: MPOP_RS29310
location: complement(22709..22864)
location: region:22709-22864:-1
so has part: feature:22709-22864:-1:exon

WP_230366166.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:22709-22864:-1:exon

MPOP_RS26930
type: Gene
subclass of: SO_0000704
RO_0002162: 441620
locus tag: MPOP_RS26930
old locus tag: Mpop_5444
so part of: sequence
location: complement(23357..23623)
location: region:23357-23623:-1
so has part: feature:23357-23623:-1:exon
subclass of: SO_0000010

position:23357:-1
position: 23357
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:23623:-1
position: 23623
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:23357-23623:-1:exon

MPOP_RS26930
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 441620
locus tag: MPOP_RS26930
old locus tag: Mpop_5444
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012631282.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MMKTLTLAGALIVTTSGYALAQQTFSAWGHDFTVSQFAPQQMMVGVATDSKTGRKFNVVKLKNGKMMAISPITGMQGMPEMAQDDMVQ
SIO_010081: MPOP_RS26930
subclass of: SO_0000673
so part of: MPOP_RS26930
location: complement(23357..23623)
location: region:23357-23623:-1
so has part: feature:23357-23623:-1:exon

WP_012457154.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:23357-23623:-1:exon

MPOP_RS26935
type: Gene
subclass of: SO_0000704
RO_0002162: 441620
locus tag: MPOP_RS26935
old locus tag: Mpop_5445
so part of: sequence
location: complement(23858..25066)
location: region:23858-25066:-1
so has part: feature:23858-25066:-1:exon
subclass of: SO_0000010

position:23858:-1
position: 23858
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:25066:-1
position: 25066
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:23858-25066:-1:exon

MPOP_RS26935
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 441620
locus tag: MPOP_RS26935
old locus tag: Mpop_5445
inference: COORDINATES: similar to AA sequence:RefSeq:WP_003596089.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: IS256-like element ISMex14 family transposase
translation: MTDDRVALIEAFQKADDGNFLRSLAETVLQILMEADVDGLIGAGRYERSGERSTYRNGYRERSLDTRLGSLNLKIPKLRTGSYFPGFLEPRKTVEKALVAVIQEAWIAGVSTRRVDDLVQAMGLSGISKSSVSKLCKDIDERVNAFLKRPLSGAWPYLWLDATYLKVREGGRIVSVAAIVAVAVDTEGRREIIGLHIGPSEAEVFWTDFLRDLVKRGLSGVQLVISDAHEGLKAAICRVLKATWQRCRVHWTRNALAYVPRAQQTMVAAGLRHAFQQPDQEAARAALHHLAEQLHNRWPKLKGFIDATSEDVLAYLTFPLQHRTKLHSTNPLERLNKEIKRRADVVGIFPNTDSIQRLIGAVLLEANDEWQLQHRYMQIEGMAGFTPSLLDDTLTAIPPQAA
SIO_010081: MPOP_RS26935
subclass of: SO_0000673
so part of: MPOP_RS26935
location: complement(23858..25066)
location: region:23858-25066:-1
so has part: feature:23858-25066:-1:exon

WP_003596089.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:23858-25066:-1:exon