Methylorubrum populi BJ001 plasmid pMPOP02, complete sequence.
type: Entry
definition: Methylorubrum populi BJ001 plasmid pMPOP02, complete sequence.
sequence version: NC_010721.1
sequence date: 2023-03-24
sequence: sequence
division: CON
label: NC_010721.1
type: RefSeq
SIO_000068: refseq
dblink: PRJNA224116
dblink: SAMN00000038
keyword: RefSeq
source: Methylorubrum populi BJ001
organism: Methylorubrum populi BJ001
taxonomy: Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales; Methylobacteriaceae; Methylorubrum.
reference: 1
references: 22887658
reference: 2
reference: 3
comment: REFSEQ INFORMATION: The reference sequence is identical to\nCP001031.1.\nURL -- http://www.jgi.doe.gov\nJGI Project ID: 4003782\nSource DNA and bacteria available from Christopher Marx\n(cmarx@oeb.harvard.edu)\nContacts: Christopher Marx (cmarx@oeb.harvard.edu)\n Paul Richardson (microbes@cuba.jgi-psf.org)\nQuality assurance done by JGI-Stanford\nAnnotation done by JGI-ORNL and JGI-PGF\nFinishing done by JGI-LANL\nFinished microbial genomes have been curated to close all gaps with\ngreater than 98% coverage of at least two independent clones. Each\nbase pair has a minimum q (quality) value of 30 and the total error\nrate is less than one per 50000.\nThe JGI and collaborators endorse the principles for the\ndistribution and use of large scale sequencing data adopted by the\nlarger genome sequencing community and urge users of this data to\nfollow them. it is our intention to publish the work of this\nproject in a timely fashion and we welcome collaborative\ninteraction on the project and analysis.\n(http://www.genome.gov/page.cfm?pageID=10506376).\nThe annotation was added by the NCBI Prokaryotic Genome Annotation\nPipeline (PGAP). Information about PGAP can be found here:\nhttps://www.ncbi.nlm.nih.gov/genome/annotation_prok/\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI RefSeq\nAnnotation Date :: 03/24/2023 13:06:10\nAnnotation Pipeline :: NCBI Prokaryotic Genome\n Annotation Pipeline (PGAP)\nAnnotation Method :: Best-placed reference protein\n set; GeneMarkS-2+\nAnnotation Software revision :: 6.4\nFeatures Annotated :: Gene; CDS; rRNA; tRNA; ncRNA\nGenes (total) :: 5,542\nCDSs (total) :: 5,467\nGenes (coding) :: 5,376\nCDSs (with protein) :: 5,376\nGenes (RNA) :: 75\nrRNAs :: 5, 5, 5 (5S, 16S, 23S)\ncomplete rRNAs :: 5, 5, 5 (5S, 16S, 23S)\ntRNAs :: 56\nncRNAs :: 4\nPseudo Genes (total) :: 91\nCDSs (without protein) :: 91\nPseudo Genes (ambiguous residues) :: 0 of 91\nPseudo Genes (frameshifted) :: 31 of 91\nPseudo Genes (incomplete) :: 72 of 91…

sequence
subclass of: SO_0000155
sequence length: 23392
topology: circular
so has quality: SO_0000988
location: 1..23392
location: region:1-23392:1
RO_0002162: 441620

NC_010721
type: RefSeq
SIO_000068: refseq

PRJNA224116
type: BioProject
SIO_000068: bioproject

SAMN00000038
type: BioSample
SIO_000068: biosample

1
title: Complete genome sequences of six strains of the genus Methylobacterium
author: Marx, C.J.
author: Bringel, F.
author: Chistoserdova, L.
author: Moulin, L.
author: Farhan Ul Haque, M.
author: Fleischman, D.E.
author: Gruffaz, C.
author: Jourand, P.
author: Knief, C.
author: Lee, M.C.
author: Muller, E.E.
author: Nadalig, T.
author: Peyraud, R.
author: Roselli, S.
author: Russ, L.
author: Goodwin, L.A.
author: Ivanova, N.
author: Kyrpides, N.
author: Lajus, A.
author: Land, M.L.
author: Medigue, C.
author: Mikhailova, N.
author: Nolan, M.
author: Woyke, T.
author: Stolyar, S.
author: Vorholt, J.A.
author: Vuilleumier, S.
journal: J Bacteriol
volume: 194
issue: 17
pages: 4746-4748
year: 2012
pubmed: 22887658

22887658
type: PubMed
SIO_000068: pubmed

2
title: Complete sequence of plamid2 of Methylobacterium populi BJ001
author: Copeland, A.
author: Lucas, S.
author: Lapidus, A.
author: Glavina del Rio, T.
author: Dalin, E.
author: Tice, H.
author: Bruce, D.
author: Goodwin, L.
author: Pitluck, S.
author: Chertkov, O.
author: Brettin, T.
author: Detter, J.C.
author: Han, C.
author: Kuske, C.R.
author: Schmutz, J.
author: Larimer, F.
author: Land, M.
author: Hauser, L.
author: Kyrpides, N.
author: Mikhailova, N.
author: Marx, C.
author: Richardson, P.
journal: Unpublished

3
title: Direct Submission
author: Copeland, A.
author: Lucas, S.
author: Lapidus, A.
author: Glavina del Rio, T.
author: Dalin, E.
author: Tice, H.
author: Bruce, D.
author: Goodwin, L.
author: Pitluck, S.
author: Chertkov, O.
author: Brettin, T.
author: Detter, J.C.
author: Han, C.
author: Kuske, C.R.
author: Schmutz, J.
author: Larimer, F.
author: Land, M.
author: Hauser, L.
author: Kyrpides, N.
author: Mikhailova, N.
author: Marx, C.
author: Richardson, P.
journal: Submitted (03-APR-2008) US DOE Joint Genome Institute, 2800 Mitchell Drive B100, Walnut Creek, CA 94598-1698, USA

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:23392:1
position: 23392
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-23392:1:source
so part of: sequence
organism: Methylorubrum populi BJ001
mol type: genomic DNA
strain: BJ001
type material: type strain of Methylorubrum populi
plasmid: pMPOP02
note: type strain of Methylobacterium populi

441620
type: Taxonomy
SIO_000068: taxonomy

MPOP_RS26940
type: Gene
subclass of: SO_0000704
RO_0002162: 441620
locus tag: MPOP_RS26940
old locus tag: Mpop_5446
so part of: sequence
location: 24..278
location: region:24-278:1
so has part: feature:24-278:1:exon
subclass of: SO_0000010

position:24:1
position: 24
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:278:1
position: 278
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:24-278:1:exon

MPOP_RS26940
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 441620
locus tag: MPOP_RS26940
old locus tag: Mpop_5446
inference: COORDINATES: protein motif:HMM:NF016990.2
GO process: GO:0016032 - viral process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: head-tail connector protein
translation: MSKVTIEEVKAHLRITDNGNDALLTQKLAAAEAHVAAYIGAPLAVDGQVPAPIREAVLQATAWLFDGTPADLSLLLIPYREWAF
SIO_010081: MPOP_RS26940
subclass of: SO_0000673
so part of: MPOP_RS26940
location: 24..278
location: region:24-278:1
so has part: feature:24-278:1:exon

WP_012449399.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:24-278:1:exon

MPOP_RS26945
type: Gene
subclass of: SO_0000704
RO_0002162: 441620
locus tag: MPOP_RS26945
old locus tag: Mpop_5447
so part of: sequence
location: 278..694
location: region:278-694:1
so has part: feature:278-694:1:exon
subclass of: SO_0000010

position:694:1
position: 694
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:278-694:1:exon

MPOP_RS26945
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 441620
locus tag: MPOP_RS26945
old locus tag: Mpop_5447
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011581223.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: HK97 gp10 family phage protein
translation: MARSAQLSRLTKKLEAIPERVREAVAPALEKSGNELVGTMRRLAPEETGALERSITVTPGGQATPPYSQPGGSHMVPVGAVAITAGNAEVRYAHLQEYGTTDAPAQPFFWPAYRLLRKRMVNRTKRALRKAVREGWQS
SIO_010081: MPOP_RS26945
subclass of: SO_0000673
so part of: MPOP_RS26945
location: 278..694
location: region:278-694:1
so has part: feature:278-694:1:exon

WP_012449400.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:278-694:1:exon

MPOP_RS26950
type: Gene
subclass of: SO_0000704
RO_0002162: 441620
locus tag: MPOP_RS26950
old locus tag: Mpop_5448
so part of: sequence
location: 691..1101
location: region:691-1101:1
so has part: feature:691-1101:1:exon
subclass of: SO_0000010

position:691:1
position: 691
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1101:1
position: 1101
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:691-1101:1:exon

MPOP_RS26950
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 441620
locus tag: MPOP_RS26950
old locus tag: Mpop_5448
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011314885.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF3168 domain-containing protein
translation: MSALALQKAMGARLAGFPAVTDLVPPANIVDAHGRPARFPSVILGDGQEVAADLTFERRHVTVFVDLHVWDRSPSFTSTKAIAGAIRAALHGDDLVLDEGRLLDLKHAGTRYLRDPDGQTAHAVVTIEALVEETRP
SIO_010081: MPOP_RS26950
subclass of: SO_0000673
so part of: MPOP_RS26950
location: 691..1101
location: region:691-1101:1
so has part: feature:691-1101:1:exon

WP_012449401.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:691-1101:1:exon

MPOP_RS26955
type: Gene
subclass of: SO_0000704
RO_0002162: 441620
locus tag: MPOP_RS26955
old locus tag: Mpop_5449
so part of: sequence
location: 1098..1424
location: region:1098-1424:1
so has part: feature:1098-1424:1:exon
subclass of: SO_0000010

position:1098:1
position: 1098
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1424:1
position: 1424
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1098-1424:1:exon

MPOP_RS26955
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 441620
locus tag: MPOP_RS26955
old locus tag: Mpop_5449
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011581221.1
GO component: GO:0044423 - virion component [Evidence IEA]
GO function: GO:0005198 - structural molecule activity [Evidence IEA]
GO process: GO:0019068 - virion assembly [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: phage head closure protein
translation: MIDARKLDRTITIERLTRTLDEFRAEVETWAPVATLAAQRIENGTREFVRAYGQAEEGAALFRTRYVAGITTADRIVFEGEHLDLVEVSELGRREGLSLRTKTQRTGP
SIO_010081: MPOP_RS26955
subclass of: SO_0000673
so part of: MPOP_RS26955
location: 1098..1424
location: region:1098-1424:1
so has part: feature:1098-1424:1:exon

WP_012449402.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1098-1424:1:exon

MPOP_RS26960
type: Gene
subclass of: SO_0000704
RO_0002162: 441620
locus tag: MPOP_RS26960
old locus tag: Mpop_5450
so part of: sequence
location: 1421..1813
location: region:1421-1813:1
so has part: feature:1421-1813:1:exon
subclass of: SO_0000010

position:1421:1
position: 1421
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1813:1
position: 1813
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1421-1813:1:exon

MPOP_RS26960
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 441620
locus tag: MPOP_RS26960
old locus tag: Mpop_5450
inference: COORDINATES: similar to AA sequence:RefSeq:WP_020187101.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: phage terminase small subunit P27 family
translation: MKGRKPVGLVTASAPPTSLPRTPAWFGREAKAEWKRMLPVLMNERRTLDLADLAAFTSYCLAVEQVAVASRELGTAYTYQANGLTKKHPLVDIRDKAMAQVLRHAAELGMTSVSRSRAAIRDDGEDDLLA
SIO_010081: MPOP_RS26960
subclass of: SO_0000673
so part of: MPOP_RS26960
location: 1421..1813
location: region:1421-1813:1
so has part: feature:1421-1813:1:exon

WP_012449403.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1421-1813:1:exon

MPOP_RS26965
type: Gene
subclass of: SO_0000704
RO_0002162: 441620
locus tag: MPOP_RS26965
old locus tag: Mpop_5451
pseudo: true
so part of: sequence
location: 1816..3448
location: region:1816-3448:1
so has part: feature:1816-3448:1:exon
subclass of: SO_0000010

position:1816:1
position: 1816
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3448:1
position: 3448
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1816-3448:1:exon

MPOP_RS26965
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 441620
locus tag: MPOP_RS26965
old locus tag: Mpop_5451
inference: COORDINATES: similar to AA sequence:RefSeq:WP_018391059.1
note: frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: terminase large subunit
SIO_010081: MPOP_RS26965
subclass of: SO_0000673
so part of: MPOP_RS26965
location: 1816..3448
location: region:1816-3448:1
so has part: feature:1816-3448:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1816-3448:1:exon

MPOP_RS27285
type: Gene
subclass of: SO_0000704
RO_0002162: 441620
locus tag: MPOP_RS27285
old locus tag: Mpop_5452
so part of: sequence
location: 3525..6749
location: region:3525-6749:1
so has part: feature:3525-6749:1:exon
subclass of: SO_0000010

position:3525:1
position: 3525
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6749:1
position: 6749
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3525-6749:1:exon

MPOP_RS27285
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 441620
locus tag: MPOP_RS27285
old locus tag: Mpop_5452
inference: COORDINATES: protein motif:HMM:NF018497.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: phage tail length tape measure family protein
translation: MNDFERNMKRAARAANENFGSIEERSKRTAKTVEEQFARSGRTVKGPTLDTSDLEKGAKLTTQQFVILKAAATDAFGSLSAGQSPLTVLTQQAGQVASAIGEDGVLGLLGGVGNGLKGLITPTVAATGAVVAFGVAAAYAFSRYTDERLATELALTGIGRASGITADQIAGMGEEIAKASGISNASARDIAVSLAATGKVTADNLADVGSLAKGYAKLFGTDMTEAGKELAAIFGGDLAAGADKLDGRLGMLDDRTRQYIKSLVAQGERQKAINVLVEAVRPQLLKAAEATSIWAKAWGAVKDGADSAAVSVGRAIDKVVTGPSPQDRLEQLRAQRAELEARRTAPVQVFGNGGLKVGRDALDDGGLKPLPQLDGTSPEAAGAVLKADLKLLEEQIKATEDLIVAEERRRQAAAEDARTNDASKLAGEITRAFNEEAEAISILEERYTALGKVLADPGAVAKLEDADKAKTTYEELGKRVAALKEEYRTGGQAAAQALRAANFANATAGLDAYRKGLAAINEKFEEQIRLARLSGDAATTAARIATIEATRAAEVRTYKVEAEERAQSSLNLPSDYAAGVVAAESGGNTNAKNSRSSATGLGQFISGTWLSLFKKVFADQAASMSDEAILALRTNREYSLRLIESYARENGVALQRAGFDASSANLNLAHFLGSGGAIKMLKADPSANAASILPDAAAANPEVFKRGGASVADILAYAERRAQRGGSSGRAQSERITALRAESEAYAKSAVEAEKLKSVEEQLAADRERGGELGKQFATATDLIKASSDKLTPALKAQRDEVLALAEARAKAAQTGLSARFDIDMAEARAALGRTSSENAARATARSYGFDLSSDAGKAATATAQLNATLAETKGLATNALSGFASDMLRGASAADALRNQLMRIADVLINKLSENLISSLFGGLSGGSSIGMGAGGLGGLSKLFGGFAEGGYTGAGGKYEPAGIVHRGEFVIPANVVKRIGVGNLEALRRGYANGGLVGAPSIPRASLGGSGAAAGSRVVTIAPVINMNAQGGDPSQNADLASQTAKAAEGMIRSLVVRELRDQMRPGAMLNQ
SIO_010081: MPOP_RS27285
subclass of: SO_0000673
so part of: MPOP_RS27285
location: 3525..6749
location: region:3525-6749:1
so has part: feature:3525-6749:1:exon

WP_052300138.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3525-6749:1:exon

MPOP_RS26975
type: Gene
subclass of: SO_0000704
RO_0002162: 441620
locus tag: MPOP_RS26975
old locus tag: Mpop_5453
so part of: sequence
location: 7436..7933
location: region:7436-7933:1
so has part: feature:7436-7933:1:exon
subclass of: SO_0000010

position:7436:1
position: 7436
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7933:1
position: 7933
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7436-7933:1:exon

MPOP_RS26975
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 441620
locus tag: MPOP_RS26975
old locus tag: Mpop_5453
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MIQAQNIRLPGPIYSQLKALAVARATTMVEVVASFLRQAVEAGEIGAETSGLSIALFLDLDAADEADQGPFAIIKTDHGDMPPMARDDAEAVAKHLALEDDSRAACYNRFGSWSTERRGTSVKLTGTSRADDKAVTITMAPIVAKGLAAQLRKVAHELIAEANVE
SIO_010081: MPOP_RS26975
subclass of: SO_0000673
so part of: MPOP_RS26975
location: 7436..7933
location: region:7436-7933:1
so has part: feature:7436-7933:1:exon

WP_012449405.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:7436-7933:1:exon

MPOP_RS28060
type: Gene
subclass of: SO_0000704
RO_0002162: 441620
locus tag: MPOP_RS28060
old locus tag: Mpop_5454
so part of: sequence
location: 8020..9102
location: region:8020-9102:1
so has part: feature:8020-9102:1:exon
subclass of: SO_0000010

position:8020:1
position: 8020
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9102:1
position: 9102
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8020-9102:1:exon

MPOP_RS28060
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 441620
locus tag: MPOP_RS28060
old locus tag: Mpop_5454
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MAPEAQALILRNTDKNDEVARVELSNTCGVAALSRDPYGFGALLAELRALDPANDDPELDALLDGLDAAVPADPVTDVVTSTPAPAASSSRSSPPVVVTEVVTKAPARTRRKRVRSGLRQREDARTMRAVARGRAGEVVEHLHSPSSTSSSPTSPKKNANDNDEPETTKTSTGRGRMIASWENAGELPRIIATNRALDRFGVPMAFSVNFDPKLIKAGNDNDRGLLDYMRRRIALGLKRALGETPPLWVAIETDDDGRPHLHGGIALTDKHAPAVVLGALAKAGGNWTRQGSAPADLRPQHDPDGWAVYPFKRKERTRRDLRQAAGLPPDARVGLYAASAELLAEGRHIHEEQRQVIGRR
SIO_010081: MPOP_RS28060
subclass of: SO_0000673
so part of: MPOP_RS28060
location: 8020..9102
location: region:8020-9102:1
so has part: feature:8020-9102:1:exon

WP_012449406.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:8020-9102:1:exon

MPOP_RS28065
type: Gene
subclass of: SO_0000704
RO_0002162: 441620
locus tag: MPOP_RS28065
old locus tag: Mpop_5455
so part of: sequence
location: complement(9356..9898)
location: region:9356-9898:-1
so has part: feature:9356-9898:-1:exon
subclass of: SO_0000010

position:9356:-1
position: 9356
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9898:-1
position: 9898
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9356-9898:-1:exon

MPOP_RS28065
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 441620
locus tag: MPOP_RS28065
old locus tag: Mpop_5455
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010339851.1
GO function: GO:0003700 - DNA-binding transcription factor activity [Evidence IEA]
GO process: GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: MarR family transcriptional regulator
translation: MNVLSDRLVNLFGALAVGITDRIKKAAFDPTIPGGGETTAAIVVIGHATGLSIDELGRVLGLSHAGTVRLVDRLVAAGFAVRSKALRDRRAVALMLTEAGETRLSAILQRRNETLSEILSHVSNADRLVLERIAETILAQMSDDAVSALTICRLCDERRCYNCPMDAFGMLESSTHRVDP
SIO_010081: MPOP_RS28065
subclass of: SO_0000673
so part of: MPOP_RS28065
location: complement(9356..9898)
location: region:9356-9898:-1
so has part: feature:9356-9898:-1:exon

WP_010339851.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:9356-9898:-1:exon

MPOP_RS26990
type: Gene
subclass of: SO_0000704
RO_0002162: 441620
locus tag: MPOP_RS26990
old locus tag: Mpop_5456
so part of: sequence
location: 10003..10479
location: region:10003-10479:1
so has part: feature:10003-10479:1:exon
subclass of: SO_0000010

position:10003:1
position: 10003
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:10479:1
position: 10479
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:10003-10479:1:exon

MPOP_RS26990
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 441620
locus tag: MPOP_RS26990
old locus tag: Mpop_5456
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010339850.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF417 family protein
translation: MFSTLHIAEKTTGSRGSLALLRWALVVIFLWFGCMKFTSYEAMGIAPLMKNSPIMSWIPAVFGVQGGSYFIGTVELATAAALIIGAFNKTASALGAAMSCLTYAVTLTFFLSTPGVAEPTAGGFPAISAGTGQFLLKDLVLLAASACLLLASIRTADA
SIO_010081: MPOP_RS26990
subclass of: SO_0000673
so part of: MPOP_RS26990
location: 10003..10479
location: region:10003-10479:1
so has part: feature:10003-10479:1:exon

WP_010339850.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:10003-10479:1:exon

MPOP_RS26995
type: Gene
subclass of: SO_0000704
RO_0002162: 441620
locus tag: MPOP_RS26995
old locus tag: Mpop_5457
so part of: sequence
location: 10613..11197
location: region:10613-11197:1
so has part: feature:10613-11197:1:exon
subclass of: SO_0000010

position:10613:1
position: 10613
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:11197:1
position: 11197
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:10613-11197:1:exon

MPOP_RS26995
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 441620
locus tag: MPOP_RS26995
old locus tag: Mpop_5457
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010339849.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: recombinase family protein
translation: MLVGYMRVSTTDDRQTVDLQRDALVATGVDHRHLHTDKASGARDDRPGLKACLDYLNAGDTLIVWKLDRLGRSLPHLLTIVTDLKARGIAFRSLTEQMDTTTPHGELLFSLFGALAQYERALTRERVMAGLAAAKRRGRQGGRPPMIDAETLERITAALDGGASKASVCRTFKVPRSTLLGTLARIGWTAPAKV
SIO_010081: MPOP_RS26995
subclass of: SO_0000673
so part of: MPOP_RS26995
location: 10613..11197
location: region:10613-11197:1
so has part: feature:10613-11197:1:exon

WP_010339849.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:10613-11197:1:exon

MPOP_RS27000
type: Gene
subclass of: SO_0000704
RO_0002162: 441620
locus tag: MPOP_RS27000
old locus tag: Mpop_5458
so part of: sequence
location: 11202..14180
location: region:11202-14180:1
so has part: feature:11202-14180:1:exon
subclass of: SO_0000010

position:11202:1
position: 11202
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:14180:1
position: 14180
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11202-14180:1:exon

MPOP_RS27000
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 441620
locus tag: MPOP_RS27000
old locus tag: Mpop_5458
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012449407.1
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: Tn3-like element ISMpo10 family transposase
translation: MPRRAVLSDEQRAALLALPDDETLLVQHWTLSRDDLAIIVRRRRPHNRLGFAIQLCALRYPGRFLRPGELIPDTPLAFVAEQLQVGPEVLADYATRGPTRYEQLDALRDAFGFMPLSRPLRTTLQEWLLPIALTTTSGARLARVMLDECRRRRIIVPGISSVERMVAQALLDAERHVAEHLTRGLDARQRRLLDALLLPHTGTNLSDLAWVRQSPGKPGRKTFAAIIERLTLLRAIGIDPDIAVGVHPERLRRLCQEGVRLTAQHVRTLQATRRRATLVATILETIVTLTDDAVLMFDRLLGQMFRREQNSADTTLKRNRRTINGKIRLLAQLGAALLAAKISGGDIGAAVEAAIGWNDLGREVDEARKLIRPDSVDPVAVAATNYPVLRQVGPSFIASFTFGAVPACHALARAVAIMRDLHFGHLRKLPAGTPVGFIRQAWRRAIGTGIPDRRIYELCVLVELRDRLRAGDMWVEGSRRYRAVEQQLIPAPVFANMRAAGPLPIPAPDTADIWLAERRARLARRLAEVERKAETDALEDVQLSLGRLRISPLKAITPEESDTALAPLYAHLPAIRITDLLAEVDRWTGFSQCFTHLQSGRAADEPRAILTAVLADATNLGHTRMAEACNLVTQRQLGWLASWHLREETYGRALARLVDAQHTAPLAALFGSGTSSSSDGQNFPLDRRAQATGAVNPHKGTEPAVSFYSHVSDRYAPFHSTVISASASEAAQVLDGLLHHGADLHIEEHHVDGGGVSDHVFALCHLLGFRFAPRIPNIAARRLHLFNGIEPGPDIAPLVAGRIDEGLIEAHWDDVLRLGTSIRTGVVSASIMLERLGSYPRANGLALALREIGRVERTLFTLDWIEQPEQRRRATRELNKGEAENALKRAIFFHRIGRIRDHALQAQSHRASALNLVAGAIVLWNTTYLQAARMHLANLGRPVPPDLLQHLSPLGWQHINLTGDYLWTDPDAPSTALRPLRQMRAVEGTAKP
SIO_010081: MPOP_RS27000
subclass of: SO_0000673
so part of: MPOP_RS27000
location: 11202..14180
location: region:11202-14180:1
so has part: feature:11202-14180:1:exon

WP_012449407.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:11202-14180:1:exon

MPOP_RS27005
type: Gene
subclass of: SO_0000704
RO_0002162: 441620
locus tag: MPOP_RS27005
old locus tag: Mpop_5459
so part of: sequence
location: 14217..14405
location: region:14217-14405:1
so has part: feature:14217-14405:1:exon
subclass of: SO_0000010

position:14217:1
position: 14217
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:14405:1
position: 14405
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:14217-14405:1:exon

MPOP_RS27005
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 441620
locus tag: MPOP_RS27005
old locus tag: Mpop_5459
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MDEHAALWPDLTIHTRHALAGTGYDVTVGMHPVLGLCIVSHAGLGELVSWITPTPIPDALTD
SIO_010081: MPOP_RS27005
subclass of: SO_0000673
so part of: MPOP_RS27005
location: 14217..14405
location: region:14217-14405:1
so has part: feature:14217-14405:1:exon

WP_012449408.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:14217-14405:1:exon

MPOP_RS27010
type: Gene
subclass of: SO_0000704
RO_0002162: 441620
locus tag: MPOP_RS27010
old locus tag: Mpop_5460
so part of: sequence
location: 14770..15528
location: region:14770-15528:1
so has part: feature:14770-15528:1:exon
subclass of: SO_0000010

position:14770:1
position: 14770
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:15528:1
position: 15528
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:14770-15528:1:exon

MPOP_RS27010
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 441620
locus tag: MPOP_RS27010
old locus tag: Mpop_5460
inference: COORDINATES: similar to AA sequence:RefSeq:WP_018046181.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MFLDQIEAAIAVASPSSLVELNRAIWSGLSSGAVSEDDAGRLAELIHARQAVAKASSTAVTGKVRPASLFPPRRAQRAPERSVAIERRRRLAASGPLPPALAQRFTVSESAVLRIVGDECRDRGRCVLCIDAIAARAGVGRTTVQNALRLARRLGMIEIEERRQEGAKNLPNRITVVDREWRQWLARGPREKRIGFKNLNTTETGSLSGEEQAGSLRQARDSRSRSDRSSESCSPSMRPFAISNRTGTTTLA
SIO_010081: MPOP_RS27010
subclass of: SO_0000673
so part of: MPOP_RS27010
location: 14770..15528
location: region:14770-15528:1
so has part: feature:14770-15528:1:exon

WP_012449409.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:14770-15528:1:exon

MPOP_RS27015
type: Gene
subclass of: SO_0000704
RO_0002162: 441620
locus tag: MPOP_RS27015
old locus tag: Mpop_5461
so part of: sequence
location: complement(16132..16497)
location: region:16132-16497:-1
so has part: feature:16132-16497:-1:exon
subclass of: SO_0000010

position:16132:-1
position: 16132
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:16497:-1
position: 16497
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:16132-16497:-1:exon

MPOP_RS27015
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 441620
locus tag: MPOP_RS27015
old locus tag: Mpop_5461
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MATFKSKAAAPKPPAPEEAPELAERVETITTPAPAEGSMKRGKGRPPGEPREVFGTRLKAETIAEVEALKAGLRLKMQGEAIERAVAFYKAHIIEKTRRELRLAPEVGDDVALSKAFKADD
SIO_010081: MPOP_RS27015
subclass of: SO_0000673
so part of: MPOP_RS27015
location: complement(16132..16497)
location: region:16132-16497:-1
so has part: feature:16132-16497:-1:exon

WP_012449410.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:16132-16497:-1:exon

MPOP_RS27020
type: Gene
subclass of: SO_0000704
RO_0002162: 441620
locus tag: MPOP_RS27020
old locus tag: Mpop_5462
so part of: sequence
location: complement(16532..17161)
location: region:16532-17161:-1
so has part: feature:16532-17161:-1:exon
subclass of: SO_0000010

position:16532:-1
position: 16532
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:17161:-1
position: 17161
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:16532-17161:-1:exon

MPOP_RS27020
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 441620
locus tag: MPOP_RS27020
old locus tag: Mpop_5462
inference: COORDINATES: similar to AA sequence:RefSeq:WP_005176595.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: AAA family ATPase
translation: MSTVVGFVSQKGGVGKSTLARALAREAAAGGLAVKIADLDHEQGTSTNWARRRMAAGLEPVVPVEPFRTAADAFKAAEHVDLMIVDGPARASAGTLEIAKGSALVVQPSSTSVDDLEPAVLVFHSLVRAGIPRAKLAVALVRVGTEAEEGFARSYMAEAGYDVLPGALLERPAYRQAQNDGQAVTEVRFKGLSERADALVQAIIDRAGL
SIO_010081: MPOP_RS27020
subclass of: SO_0000673
so part of: MPOP_RS27020
location: complement(16532..17161)
location: region:16532-17161:-1
so has part: feature:16532-17161:-1:exon

WP_012449411.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:16532-17161:-1:exon

MPOP_RS27025
type: Gene
subclass of: SO_0000704
RO_0002162: 441620
locus tag: MPOP_RS27025
old locus tag: Mpop_5463
so part of: sequence
location: 17389..18627
location: region:17389-18627:1
so has part: feature:17389-18627:1:exon
subclass of: SO_0000010

position:17389:1
position: 17389
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:18627:1
position: 18627
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:17389-18627:1:exon

MPOP_RS27025
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 441620
locus tag: MPOP_RS27025
old locus tag: Mpop_5463
inference: COORDINATES: protein motif:HMM:TIGR01537.1
GO component: GO:0044423 - virion component [Evidence IEA]
GO function: GO:0005198 - structural molecule activity [Evidence IEA]
GO process: GO:0019068 - virion assembly [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: phage portal protein
translation: MPSLVSRVLRRAPAPVETKAAPAPSGTSAPEDWFLDLTVGRATSAGMRVGAREAMRVPAVKRAVDLIGSTLGTLPVRVFTLSTDEARKLDPDHPAFGLVYRAANGWTSARKFRETLTRDALLHGDGFAYVVRVAGKPRELIHLPPGTVSVELDEITREPFYRATIDGVSQVLTWRDVLHVPAPTLDGVRGASPVSLGREAIGLALTLEAHAARLFANGARPGGVLMFAKSLGDTVAARMKKSWQAAFGGEGTGGTAVLEEGAEYKSVTLTSVDAEFMAQRRHQVREVANVFGLPSTMLGDTENATYSNVEGLAQSFRDETILPWVAAWEDAYARALLDEGELATHAILFDLDALDRADLAAKSEAMAKRRAAGVTTANEERRTLNLPDHANGNELGSPYTTANAGKPAEQAA
SIO_010081: MPOP_RS27025
subclass of: SO_0000673
so part of: MPOP_RS27025
location: 17389..18627
location: region:17389-18627:1
so has part: feature:17389-18627:1:exon

WP_012449412.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:17389-18627:1:exon

MPOP_RS27030
type: Gene
subclass of: SO_0000704
RO_0002162: 441620
locus tag: MPOP_RS27030
old locus tag: Mpop_5464
so part of: sequence
location: 18624..18977
location: region:18624-18977:1
so has part: feature:18624-18977:1:exon
subclass of: SO_0000010

position:18624:1
position: 18624
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:18977:1
position: 18977
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:18624-18977:1:exon

MPOP_RS27030
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 441620
locus tag: MPOP_RS27030
old locus tag: Mpop_5464
inference: COORDINATES: similar to AA sequence:RefSeq:WP_008597078.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: gene transfer agent family protein
translation: MSRTAHVAFFGDHDHTFDLAKPELIRELENLTGVGIGALVGRVIETRTFFHADLEAVLRLGLIGGGVHPKPAAHLVETYLPLMPLAEVQTIAIGTLAALWFGVKPTPEHIVNEETEQ
SIO_010081: MPOP_RS27030
subclass of: SO_0000673
so part of: MPOP_RS27030
location: 18624..18977
location: region:18624-18977:1
so has part: feature:18624-18977:1:exon

WP_012449413.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:18624-18977:1:exon

MPOP_RS28615
type: Gene
subclass of: SO_0000704
RO_0002162: 441620
locus tag: MPOP_RS28615
old locus tag: Mpop_5465
so part of: sequence
location: 18974..19150
location: region:18974-19150:1
so has part: feature:18974-19150:1:exon
subclass of: SO_0000010

position:18974:1
position: 18974
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:19150:1
position: 19150
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:18974-19150:1:exon

MPOP_RS28615
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 441620
locus tag: MPOP_RS28615
old locus tag: Mpop_5465
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MTREEEFNRALAQRQLADERAHLEAHARYLARIGCKDRFKLAGLRNAFDELARKEARQ
SIO_010081: MPOP_RS28615
subclass of: SO_0000673
so part of: MPOP_RS28615
location: 18974..19150
location: region:18974-19150:1
so has part: feature:18974-19150:1:exon

WP_012449414.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:18974-19150:1:exon

MPOP_RS27035
type: Gene
subclass of: SO_0000704
RO_0002162: 441620
locus tag: MPOP_RS27035
old locus tag: Mpop_5466
so part of: sequence
location: 19147..19650
location: region:19147-19650:1
so has part: feature:19147-19650:1:exon
subclass of: SO_0000010

position:19147:1
position: 19147
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:19650:1
position: 19650
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:19147-19650:1:exon

MPOP_RS27035
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 441620
locus tag: MPOP_RS27035
old locus tag: Mpop_5466
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013166862.1
GO component: GO:0044423 - virion component [Evidence IEA]
GO function: GO:0008233 - peptidase activity [Evidence IEA]; GO:0005198 - structural molecule activity [Evidence IEA]
GO process: GO:0019068 - virion assembly [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: HK97 family phage prohead protease
translation: MSLDFLERKAAISATDEGEITALAWSFASADRYGDIITKGAFSPLPASLPMLFAHDPAQVVGVWEHFAETPEGLEVRGRMFLGQTRADEVRTMIQAGALGGISIGFDKRQWAPRPDHRTGRTIRSLTLAEVSLVSVPAHPRARIRTAKNGAAAVAIAAALNRFASKL
SIO_010081: MPOP_RS27035
subclass of: SO_0000673
so part of: MPOP_RS27035
location: 19147..19650
location: region:19147-19650:1
so has part: feature:19147-19650:1:exon

WP_012449415.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:19147-19650:1:exon

MPOP_RS27040
type: Gene
subclass of: SO_0000704
RO_0002162: 441620
locus tag: MPOP_RS27040
old locus tag: Mpop_5467
so part of: sequence
location: 19680..20834
location: region:19680-20834:1
so has part: feature:19680-20834:1:exon
subclass of: SO_0000010

position:19680:1
position: 19680
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:20834:1
position: 20834
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:19680-20834:1:exon

MPOP_RS27040
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 441620
locus tag: MPOP_RS27040
old locus tag: Mpop_5467
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013166863.1
GO component: GO:0044423 - virion component [Evidence IEA]
GO function: GO:0005198 - structural molecule activity [Evidence IEA]
GO process: GO:0019068 - virion assembly [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: phage major capsid protein
translation: MHVAALEGAPIELKDAEGETDAAEAVAKALGEIETKLNARFDAIETKSADRLDRLEARLNRPGLSAPKADDAPAGDIERKAFTGYLRAGPNGLGAEEKKALSVGVQTAGGYLAPDQFTLDFVRDLTLFSPIRGIADVRNTSSHTVLYPKRTAITNARWQGEAQPTTGSEPAFDQGEIEVKNLATHTDINNQLIDDAVVDIEAEVRLALAEDFGVKEGKAFVSGDGVLEPEGFMTAAGVPVTLNGHASNLSTDQLIAMLYSLAPAYRSAATWVMNGNTLAVIRKLKDSQGNYLWQPGLVAGQPETILGRPVVEAVDMADVGANAFPIALGAFKAAYRIYDRKAMEVKANPFLLMTQDQTRFHAFRRTGAAVVQPAALRKLKMATS
SIO_010081: MPOP_RS27040
subclass of: SO_0000673
so part of: MPOP_RS27040
location: 19680..20834
location: region:19680-20834:1
so has part: feature:19680-20834:1:exon

WP_041372221.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:19680-20834:1:exon

MPOP_RS27045
type: Gene
subclass of: SO_0000704
RO_0002162: 441620
locus tag: MPOP_RS27045
old locus tag: Mpop_5468
so part of: sequence
location: 20913..21356
location: region:20913-21356:1
so has part: feature:20913-21356:1:exon
subclass of: SO_0000010

position:20913:1
position: 20913
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:21356:1
position: 21356
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:20913-21356:1:exon

MPOP_RS27045
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 441620
locus tag: MPOP_RS27045
old locus tag: Mpop_5468
inference: COORDINATES: protein motif:HMM:NF020392.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: phage tail tube protein
translation: MGYSSTIKTKVRIGTTKPAAALADYEADTYTPIAGLTDIGEFGDEFEEIKFNTIEDGRTHKLKGSADAGNWDVEVARNPNDPGQIALRAAAKSSDGVFNFHVELADGTDFYFRGNVMAGKNSFGSNDVNKQKFTVGITSEILEVAAA
SIO_010081: MPOP_RS27045
subclass of: SO_0000673
so part of: MPOP_RS27045
location: 20913..21356
location: region:20913-21356:1
so has part: feature:20913-21356:1:exon

WP_012449417.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:20913-21356:1:exon

MPOP_RS27050
type: Gene
subclass of: SO_0000704
RO_0002162: 441620
locus tag: MPOP_RS27050
old locus tag: Mpop_5469
so part of: sequence
location: 21415..21951
location: region:21415-21951:1
so has part: feature:21415-21951:1:exon
subclass of: SO_0000010

position:21415:1
position: 21415
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:21951:1
position: 21951
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:21415-21951:1:exon

MPOP_RS27050
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 441620
locus tag: MPOP_RS27050
old locus tag: Mpop_5469
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: phage tail assembly chaperone
translation: MRPSLRAATRIERQHGGFPAVLRALDECSVTVIADLIQECATAPTNVPALLLTPGLAWRVRPLVPAFEVLVLNLMGADLDAEEKGDGDHDADARTTFAEVHTKLFRLATGWLGWTPAETWAASPREIKQAYEGRVELLHAVFGGGEEKPNDRDRAATADERFASGIRAMGTTKVARPA
SIO_010081: MPOP_RS27050
subclass of: SO_0000673
so part of: MPOP_RS27050
location: 21415..21951
location: region:21415-21951:1
so has part: feature:21415-21951:1:exon

WP_012449418.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:21415-21951:1:exon

MPOP_RS29315
type: Gene
subclass of: SO_0000704
RO_0002162: 441620
locus tag: MPOP_RS29315
old locus tag: Mpop_5470
so part of: sequence
location: 21951..22289
location: region:21951-22289:1
so has part: feature:21951-22289:1:exon
subclass of: SO_0000010

position:22289:1
position: 22289
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:21951-22289:1:exon

MPOP_RS29315
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 441620
locus tag: MPOP_RS29315
old locus tag: Mpop_5470
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011840290.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MPVRPARICPCGHRVPGGTQCACQVKAEAARRARAEANRPSARERGYSVAWQKARAGFLAKHPTCACGAPATVVHHTIPHRGDKALFWNRRLWAPACAPCHNGPLQAEEKRP
SIO_010081: MPOP_RS29315
subclass of: SO_0000673
so part of: MPOP_RS29315
location: 21951..22289
location: region:21951-22289:1
so has part: feature:21951-22289:1:exon

WP_012449419.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:21951-22289:1:exon

MPOP_RS27060
type: Gene
subclass of: SO_0000704
RO_0002162: 441620
locus tag: MPOP_RS27060
old locus tag: Mpop_5471
so part of: sequence
location: 22286..22636
location: region:22286-22636:1
so has part: feature:22286-22636:1:exon
subclass of: SO_0000010

position:22286:1
position: 22286
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:22636:1
position: 22636
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:22286-22636:1:exon

MPOP_RS27060
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 441620
locus tag: MPOP_RS27060
old locus tag: Mpop_5471
inference: COORDINATES: protein motif:HMM:NF017726.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: phage tail protein
translation: MSLDTFYPPVAPSPGTSRRPELKLLEAEFGDGYSQAGADGMNHIRDVFTLKWDVLTQGQADAIDAFLRSKRGTMPFLYQHAHTSAPVKVTCKEWNRDDEAAGLCRFTATFRQSFAL
SIO_010081: MPOP_RS27060
subclass of: SO_0000673
so part of: MPOP_RS27060
location: 22286..22636
location: region:22286-22636:1
so has part: feature:22286-22636:1:exon

WP_012449420.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:22286-22636:1:exon

MPOP_RS27065
type: Gene
subclass of: SO_0000704
RO_0002162: 441620
locus tag: MPOP_RS27065
old locus tag: Mpop_5472
so part of: sequence
location: 22636..23277
location: region:22636-23277:1
so has part: feature:22636-23277:1:exon
subclass of: SO_0000010

position:23277:1
position: 23277
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:22636-23277:1:exon

MPOP_RS27065
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 441620
locus tag: MPOP_RS27065
old locus tag: Mpop_5472
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MADTPNSRRNLWRAVIRQAMEDATRFGQGDSDYAREVRRDRETARAWLTKPSADFNEVCELADFEPDQVRKEAVALIAEADARVAAGLRVRPRKTKPKSEVQRYEFQGERLTIPEWSKRTGICAPTLRGRLNTGWPLELALTKPAVVGAFGQPHAHREAKRITFEGKSLSVREWAEATGINAKTLHARLEARWPVSRALTAPARSRPRETVPA
SIO_010081: MPOP_RS27065
subclass of: SO_0000673
so part of: MPOP_RS27065
location: 22636..23277
location: region:22636-23277:1
so has part: feature:22636-23277:1:exon

WP_012449421.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:22636-23277:1:exon