Crocosphaera subtropica ATCC 51142 chromosome linear, complete sequence.
Bacteria; Cyanobacteriota; Cyanophyceae; Oscillatoriophycideae; Chroococcales; Aphanothecaceae; Crocosphaera; Crocosphaera subtropica.
The genome of Cyanothece 51142, a unicellular diazotrophic cyanobacterium important in the marine nitrogen cycle
Submitted (22-AUG-2007) Department of Biology, Washington University in Saint Louis, One Brookings Drive, Campus Box 1137, Saint Louis, MO 63130, USA
REFSEQ INFORMATION: The reference sequence is identical to\nCP000807.1.\nBacteria available from the ATCC Cell Biology Collection: ATCC\n51142. Products annotated as 'unknown' have been observed in\nhigh-throughput proteomics experiments. Products annotated as\n'conserved hypothetical protein' have orthologs in at least 6 other\ncyanobacterial genomes.\nThe annotation was added by the NCBI Prokaryotic Genome Annotation\nPipeline (PGAP). Information about PGAP can be found here:\nhttps://www.ncbi.nlm.nih.gov/genome/annotation_prok/\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI RefSeq\nAnnotation Date :: 04/16/2023 01:44:35\nAnnotation Pipeline :: NCBI Prokaryotic Genome\n Annotation Pipeline (PGAP)\nAnnotation Method :: Best-placed reference protein\n set; GeneMarkS-2+\nAnnotation Software revision :: 6.5\nFeatures Annotated :: Gene; CDS; rRNA; tRNA; ncRNA\nGenes (total) :: 5,090\nCDSs (total) :: 5,037\nGenes (coding) :: 4,957\nCDSs (with protein) :: 4,957\nGenes (RNA) :: 53\nrRNAs :: 2, 2, 2 (5S, 16S, 23S)\ncomplete rRNAs :: 2, 2, 2 (5S, 16S, 23S)\ntRNAs :: 43\nncRNAs :: 4\nPseudo Genes (total) :: 80\nCDSs (without protein) :: 80\nPseudo Genes (ambiguous residues) :: 0 of 80\nPseudo Genes (frameshifted) :: 20 of 80\nPseudo Genes (incomplete) :: 48 of 80\nPseudo Genes (internal stop) :: 24 of 80\nPseudo Genes (multiple problems) :: 9 of 80\nCRISPR Arrays :: 3\n##Genome-Annotation-Data-END##\nCOMPLETENESS: full length.
reference strain of Crocosphaera subtropica
COORDINATES: similar to AA sequence:RefSeq:WP_013334987.1
Derived by automated computational analysis using gene prediction method: Protein Homology.
ArdC-like ssDNA-binding domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_009547931.1
COORDINATES: ab initio prediction:GeneMarkS-2+
Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
COORDINATES: similar to AA sequence:RefSeq:WP_009547933.1
COORDINATES: similar to AA sequence:RefSeq:WP_009547934.1
COORDINATES: similar to AA sequence:RefSeq:WP_009547935.1
COORDINATES: similar to AA sequence:RefSeq:WP_009547936.1
COORDINATES: similar to AA sequence:RefSeq:WP_009547937.1
COORDINATES: similar to AA sequence:RefSeq:WP_009547938.1
COORDINATES: similar to AA sequence:RefSeq:WP_009547939.1
GO:0006457 - protein folding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_009547941.1
GO:0003896 - DNA primase activity [Evidence IEA]
GO:0006260 - DNA replication [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_009547942.1
helix-turn-helix transcriptional regulator
COORDINATES: similar to AA sequence:RefSeq:WP_007303490.1
COORDINATES: similar to AA sequence:RefSeq:WP_009547944.1
COORDINATES: similar to AA sequence:RefSeq:WP_009547945.1
COORDINATES: similar to AA sequence:RefSeq:WP_009547946.1
COORDINATES: similar to AA sequence:RefSeq:WP_009547949.1
COORDINATES: similar to AA sequence:RefSeq:WP_009545072.1
ISAs1-like element ISCysp6 family transposase
COORDINATES: similar to AA sequence:RefSeq:WP_009547950.1
COORDINATES: similar to AA sequence:RefSeq:WP_009547951.1
COORDINATES: similar to AA sequence:RefSeq:WP_009547952.1
COORDINATES: similar to AA sequence:RefSeq:WP_009547953.1
COORDINATES: protein motif:HMM:NF020926.2
COORDINATES: similar to AA sequence:RefSeq:WP_009546323.1
COORDINATES: protein motif:HMM:NF012573.2
COORDINATES: similar to AA sequence:RefSeq:WP_009546444.1
GO:0008236 - serine-type peptidase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_009546443.1
COORDINATES: similar to AA sequence:RefSeq:WP_009546442.1
COORDINATES: protein motif:HMM:NF020427.2
COORDINATES: similar to AA sequence:RefSeq:WP_009546439.1
COORDINATES: similar to AA sequence:RefSeq:WP_009546437.1
GO:0005515 - protein binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_009546436.1
COORDINATES: similar to AA sequence:RefSeq:WP_009546434.1
COORDINATES: similar to AA sequence:RefSeq:WP_009546433.1
COORDINATES: similar to AA sequence:RefSeq:WP_015955838.1
GO:0003677 - DNA binding [Evidence IEA]; GO:0003917 - DNA topoisomerase type I (single strand cut, ATP-independent) activity [Evidence IEA]
GO:0006260 - DNA replication [Evidence IEA]; GO:0006265 - DNA topological change [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_009546431.1
COORDINATES: similar to AA sequence:RefSeq:WP_009546430.1
PEP-CTERM proteins occur, often in large numbers, in the proteomes of bacteria that also encode an exosortase, a predicted intramembrane cysteine proteinase. The presence of a PEP-CTERM domain at a protein's C-terminus predicts cleavage within the sorting domain, followed by covalent anchoring to some some component of the (usually Gram-negative) cell surface. Many PEP-CTERM proteins exhibit an unusual sequence composition that includes large numbers of potential glycosylation sites. Expression of one such protein has been shown restore the ability of a bacterium to form floc, a type of biofilm; Derived by automated computational analysis using gene prediction method: Protein Homology.
PEP-CTERM sorting domain-containing protein
COORDINATES: nucleotide motif:Rfam:14.4:RF00174
cobalamin riboswitch; Derived by automated computational analysis using gene prediction method: cmsearch.
COORDINATES: similar to AA sequence:RefSeq:WP_009546429.1
GO:0016491 - oxidoreductase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_009546428.1
COORDINATES: similar to AA sequence:RefSeq:WP_012362347.1
GO:0004129 - cytochrome-c oxidase activity [Evidence IEA]; GO:0020037 - heme binding [Evidence IEA]
GO:0009060 - aerobic respiration [Evidence IEA]
cbb3-type cytochrome c oxidase subunit I
COORDINATES: similar to AA sequence:RefSeq:WP_009546426.1
COORDINATES: similar to AA sequence:RefSeq:WP_009546425.1
COORDINATES: similar to AA sequence:RefSeq:WP_009546424.1
COORDINATES: similar to AA sequence:RefSeq:WP_009546423.1
COORDINATES: similar to AA sequence:RefSeq:WP_009546422.1
COORDINATES: protein motif:HMM:NF003556.0
GO:0003871 - 5-methyltetrahydropteroyltriglutamate-homocysteine S-methyltransferase activity [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA]
GO:0008652 - amino acid biosynthetic process [Evidence IEA]; GO:0009086 - methionine biosynthetic process [Evidence IEA]
5-methyltetrahydropteroyltriglutamate-- homocysteine S-methyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_007310459.1
COORDINATES: similar to AA sequence:RefSeq:WP_012594775.1
GO:0016020 - membrane [Evidence IEA]; GO:0046930 - pore complex [Evidence IEA]
GO:0015093 - ferrous iron transmembrane transporter activity [Evidence IEA]
GO:0033212 - iron import into cell [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_009546418.1
COORDINATES: similar to AA sequence:RefSeq:WP_002801686.1
COORDINATES: protein motif:HMM:NF022135.2
COORDINATES: similar to AA sequence:RefSeq:WP_009546415.1
COORDINATES: protein motif:HMM:NF021536.2
COORDINATES: similar to AA sequence:RefSeq:WP_009546413.1
COORDINATES: protein motif:HMM:NF011539.0
bifunctional 3'-5' exonuclease/DNA polymerase
COORDINATES: similar to AA sequence:RefSeq:WP_007305163.1
GO:0003934 - GTP cyclohydrolase I activity [Evidence IEA]
GO:0042559 - pteridine-containing compound biosynthetic process [Evidence IEA]; GO:0046654 - tetrahydrofolate biosynthetic process [Evidence IEA]
frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_008276156.1
GO:0005525 - GTP binding [Evidence IEA]; GO:0003924 - GTPase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_009546408.1
COORDINATES: similar to AA sequence:RefSeq:WP_007303255.1
GO:0004829 - threonine-tRNA ligase activity [Evidence IEA]
GO:0006435 - threonyl-tRNA aminoacylation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_009546406.1
GO:0004519 - endonuclease activity [Evidence IEA]; GO:0003676 - nucleic acid binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_009546405.1
GO:0003824 - catalytic activity [Evidence IEA]
GO:0006777 - Mo-molybdopterin cofactor biosynthetic process [Evidence IEA]
molybdenum cofactor biosynthesis protein B
COORDINATES: similar to AA sequence:RefSeq:WP_008277381.1
COORDINATES: similar to AA sequence:RefSeq:WP_008276164.1
COORDINATES: similar to AA sequence:RefSeq:WP_009546402.1
COORDINATES: similar to AA sequence:RefSeq:WP_009546401.1
COORDINATES: similar to AA sequence:RefSeq:WP_008276170.1
GO:0004817 - cysteine-tRNA ligase activity [Evidence IEA]
GO:0006423 - cysteinyl-tRNA aminoacylation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_009546399.1
COORDINATES: similar to AA sequence:RefSeq:WP_009546398.1
COORDINATES: similar to AA sequence:RefSeq:WP_015230215.1
GO:0004635 - phosphoribosyl-AMP cyclohydrolase activity [Evidence IEA]
GO:0000105 - histidine biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_007309630.1
COORDINATES: similar to AA sequence:RefSeq:WP_009546395.1
NAD(P)-binding domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_009546394.1
COORDINATES: similar to AA sequence:RefSeq:WP_009546393.1
COORDINATES: similar to AA sequence:RefSeq:WP_019506740.1
GO:0046872 - metal ion binding [Evidence IEA]; GO:0042578 - phosphoric ester hydrolase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_007305708.1
COORDINATES: similar to AA sequence:RefSeq:WP_009546390.1
GO:0003824 - catalytic activity [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0004655 - porphobilinogen synthase activity [Evidence IEA]
GO:0033014 - tetrapyrrole biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_009546389.1
PEP-CTERM proteins occur, often in large numbers, in the proteomes of bacteria that also encode an exosortase, a predicted intramembrane cysteine proteinase. The presence of a PEP-CTERM domain at a protein's C-terminus predicts cleavage within the sorting domain, followed by covalent anchoring to some some component of the (usually Gram-negative) cell surface. Many PEP-CTERM proteins exhibit an unusual sequence composition that includes large numbers of potential glycosylation sites. Expression of one such protein has been shown restore the ability of a bacterium to form floc, a type of biofilm.; PEP-CTERM proteins occur, often in large numbers, in the proteomes of bacteria that also encode an exosortase, a predicted intramembrane cysteine proteinase. The presence of a PEP-CTERM domain at a protein's C-terminus predicts cleavage within the sorting domain, followed by covalent anchoring to some some component of the (usually Gram-negative) cell surface. Many PEP-CTERM proteins exhibit an unusual sequence composition that includes large numbers of potential glycosylation sites. Expression of one such protein has been shown restore the ability of a bacterium to form floc, a type of biofilm.; PEP-CTERM proteins occur, often in large numbers, in the proteomes of bacteria that also encode an exosortase, a predicted intramembrane cysteine proteinase. The presence of a PEP-CTERM domain at a protein's C-terminus predicts cleavage within the sorting domain, followed by covalent anchoring to some some component of the (usually Gram-negative) cell surface. Many PEP-CTERM proteins exhibit an unusual sequence composition that includes large numbers of potential glycosylation sites. Expression of one such protein has been shown restore the ability of a bacterium to form floc, a type of biofilm; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_009546388.1
GO:0003677 - DNA binding [Evidence IEA]; GO:0003700 - DNA-binding transcription factor activity [Evidence IEA]
GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
metalloregulator ArsR/SmtB family transcription factor
COORDINATES: similar to AA sequence:RefSeq:WP_009546387.1
GO:0008324 - monoatomic cation transmembrane transporter activity [Evidence IEA]
GO:0006812 - monoatomic cation transport [Evidence IEA]; GO:0055085 - transmembrane transport [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_009546386.1
COORDINATES: similar to AA sequence:RefSeq:WP_006511891.1
COORDINATES: similar to AA sequence:RefSeq:WP_009546384.1
COORDINATES: similar to AA sequence:RefSeq:WP_009546383.1
COORDINATES: similar to AA sequence:RefSeq:WP_006511876.1
GO:0043190 - ATP-binding cassette (ABC) transporter complex [Evidence IEA]
GO:0030001 - metal ion transport [Evidence IEA]; GO:0055085 - transmembrane transport [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_009546381.1
GO:0140359 - ABC-type transporter activity [Evidence IEA]; GO:0005524 - ATP binding [Evidence IEA]; GO:0016887 - ATP hydrolysis activity [Evidence IEA]; GO:0042626 - ATPase-coupled transmembrane transporter activity [Evidence IEA]
metal ABC transporter ATP-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_009546380.1
GO:0046872 - metal ion binding [Evidence IEA]
zinc ABC transporter substrate-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_008276193.1
COORDINATES: similar to AA sequence:RefSeq:WP_009546378.1
COORDINATES: similar to AA sequence:RefSeq:WP_009546377.1
bifunctional class I SAM-dependent methyltransferase/DEAD/DEAH box helicase
COORDINATES: similar to AA sequence:RefSeq:WP_009546376.1
GO:0009360 - DNA polymerase III complex [Evidence IEA]
GO:0003887 - DNA-directed DNA polymerase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_009546375.1
COORDINATES: similar to AA sequence:RefSeq:WP_006528005.1
helix-turn-helix domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_009546372.1
COORDINATES: similar to AA sequence:RefSeq:WP_009546370.1
COORDINATES: similar to AA sequence:RefSeq:WP_009546369.1
COORDINATES: similar to AA sequence:RefSeq:WP_009546368.1
COORDINATES: similar to AA sequence:RefSeq:WP_008276205.1
COORDINATES: similar to AA sequence:RefSeq:WP_009546365.1
COORDINATES: similar to AA sequence:RefSeq:WP_009546364.1
COORDINATES: similar to AA sequence:RefSeq:WP_009546363.1
GO:0009263 - deoxyribonucleotide biosynthetic process [Evidence IEA]
ribonucleotide-diphosphate reductase subunit beta
COORDINATES: protein motif:HMM:NF015442.2
GO:0005524 - ATP binding [Evidence IEA]; GO:0004748 - ribonucleoside-diphosphate reductase activity, thioredoxin disulfide as acceptor [Evidence IEA]
ribonucleotide reductase N-terminal alpha domain-containing protein
COORDINATES: protein motif:HMM:TIGR02506.1
GO:0005971 - ribonucleoside-diphosphate reductase complex [Evidence IEA]
GO:0004748 - ribonucleoside-diphosphate reductase activity, thioredoxin disulfide as acceptor [Evidence IEA]
GO:0009265 - 2'-deoxyribonucleotide biosynthetic process [Evidence IEA]
ribonucleoside-diphosphate reductase subunit alpha
COORDINATES: similar to AA sequence:RefSeq:WP_009546358.1
COORDINATES: similar to AA sequence:RefSeq:WP_009546356.1
COORDINATES: similar to AA sequence:RefSeq:WP_009546355.1
GO:0007059 - chromosome segregation [Evidence IEA]; GO:0000910 - cytokinesis [Evidence IEA]
ParB/RepB/Spo0J family partition protein
COORDINATES: similar to AA sequence:RefSeq:WP_009543200.1
COORDINATES: similar to AA sequence:RefSeq:WP_009546353.1
COORDINATES: similar to AA sequence:RefSeq:WP_009546352.1
lysophospholipid acyltransferase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_012361252.1
zinc-dependent alcohol dehydrogenase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_009543194.1
COORDINATES: similar to AA sequence:RefSeq:WP_009546349.1
SDR family NAD(P)-dependent oxidoreductase
COORDINATES: similar to AA sequence:RefSeq:WP_006530201.1
COORDINATES: similar to AA sequence:RefSeq:WP_009546348.1
COORDINATES: similar to AA sequence:RefSeq:WP_008276225.1
COORDINATES: similar to AA sequence:RefSeq:WP_009546346.1
COORDINATES: similar to AA sequence:RefSeq:WP_009546344.1
COORDINATES: similar to AA sequence:RefSeq:WP_008276229.1
COORDINATES: similar to AA sequence:RefSeq:WP_009546342.1
COORDINATES: similar to AA sequence:RefSeq:WP_009546341.1
COORDINATES: similar to AA sequence:RefSeq:WP_009546340.1
COORDINATES: similar to AA sequence:RefSeq:WP_009546339.1
GO:0005215 - transporter activity [Evidence IEA]
GO:0055085 - transmembrane transport [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_009546337.1
COORDINATES: similar to AA sequence:RefSeq:WP_009546336.1
COORDINATES: similar to AA sequence:RefSeq:WP_007310329.1
incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_009546333.1
COORDINATES: similar to AA sequence:RefSeq:WP_009546332.1
COORDINATES: similar to AA sequence:RefSeq:WP_008276233.1
protein adenylyltransferase SelO family protein
COORDINATES: similar to AA sequence:RefSeq:WP_009546330.1
COORDINATES: similar to AA sequence:RefSeq:WP_009546329.1
GO:0030976 - thiamine pyrophosphate binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_009546328.1
GO:0016799 - hydrolase activity, hydrolyzing N-glycosyl compounds [Evidence IEA]
GO:0009691 - cytokinin biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_009545079.1
COORDINATES: similar to AA sequence:RefSeq:WP_007313291.1
COORDINATES: similar to AA sequence:RefSeq:WP_009546325.1
COORDINATES: similar to AA sequence:RefSeq:WP_009546324.1
COORDINATES: similar to AA sequence:RefSeq:WP_009546322.1
COORDINATES: similar to AA sequence:RefSeq:WP_009546321.1
GO:0015074 - DNA integration [Evidence IEA]; GO:0006310 - DNA recombination [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_009546320.1
GO:0003677 - DNA binding [Evidence IEA]; GO:0004521 - endoribonuclease activity [Evidence IEA]; GO:0003723 - RNA binding [Evidence IEA]
type II toxin-antitoxin system PemK/MazF family toxin
COORDINATES: similar to AA sequence:RefSeq:WP_009546319.1
COORDINATES: similar to AA sequence:RefSeq:WP_009546318.1
COORDINATES: similar to AA sequence:RefSeq:WP_009546317.1
COORDINATES: similar to AA sequence:RefSeq:WP_009546316.1
COORDINATES: similar to AA sequence:RefSeq:WP_009546315.1
COORDINATES: similar to AA sequence:RefSeq:WP_009546314.1
COORDINATES: similar to AA sequence:RefSeq:WP_007309201.1
COORDINATES: similar to AA sequence:RefSeq:WP_009546312.1
filamentous hemagglutinin N-terminal domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_009546311.1
COORDINATES: similar to AA sequence:RefSeq:WP_009546310.1
COORDINATES: similar to AA sequence:RefSeq:WP_009546309.1
GO:0000156 - phosphorelay response regulator activity [Evidence IEA]
GO:0000160 - phosphorelay signal transduction system [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_009546307.1
COORDINATES: similar to AA sequence:RefSeq:WP_009546306.1
COORDINATES: similar to AA sequence:RefSeq:WP_009546305.1
COORDINATES: similar to AA sequence:RefSeq:WP_009546304.1
COORDINATES: similar to AA sequence:RefSeq:WP_009546303.1
COORDINATES: similar to AA sequence:RefSeq:WP_008277724.1
GO:0006950 - response to stress [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_008277725.1
COORDINATES: similar to AA sequence:RefSeq:WP_009546300.1
COORDINATES: similar to AA sequence:RefSeq:WP_009546299.1
COORDINATES: similar to AA sequence:RefSeq:WP_008277729.1
COORDINATES: similar to AA sequence:RefSeq:WP_009546297.1
COORDINATES: similar to AA sequence:RefSeq:WP_009546294.1
COORDINATES: similar to AA sequence:RefSeq:WP_012796537.1
COORDINATES: protein motif:HMM:NF025742.2
COORDINATES: similar to AA sequence:RefSeq:WP_009546290.1
GO:0003677 - DNA binding [Evidence IEA]; GO:0003723 - RNA binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_009546289.1
COORDINATES: similar to AA sequence:RefSeq:WP_009546288.1
COORDINATES: similar to AA sequence:RefSeq:WP_009546287.1
COORDINATES: similar to AA sequence:RefSeq:WP_009546286.1
COORDINATES: similar to AA sequence:RefSeq:WP_009546285.1
COORDINATES: similar to AA sequence:RefSeq:WP_009546283.1
COORDINATES: similar to AA sequence:RefSeq:WP_009546281.1
COORDINATES: similar to AA sequence:RefSeq:WP_009546280.1
GO:0003729 - mRNA binding [Evidence IEA]
type II toxin-antitoxin system HicA family toxin
COORDINATES: similar to AA sequence:RefSeq:WP_012593019.1
GO:0004803 - transposase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_009546275.1
COORDINATES: similar to AA sequence:RefSeq:WP_009546274.1
COORDINATES: protein motif:HMM:NF016268.2
COORDINATES: similar to AA sequence:RefSeq:WP_008277752.1
COORDINATES: similar to AA sequence:RefSeq:WP_009546271.1
COORDINATES: similar to AA sequence:RefSeq:WP_009546270.1
COORDINATES: similar to AA sequence:RefSeq:WP_009546269.1
COORDINATES: similar to AA sequence:RefSeq:WP_009546268.1
COORDINATES: similar to AA sequence:RefSeq:WP_008277996.1
COORDINATES: similar to AA sequence:RefSeq:WP_009546262.1
COORDINATES: similar to AA sequence:RefSeq:WP_008278000.1
GO:0000166 - nucleotide binding [Evidence IEA]
GO:0030541 - plasmid partitioning [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_008278001.1
COORDINATES: similar to AA sequence:RefSeq:WP_008278002.1
relaxase/mobilization nuclease domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_009546258.1
COORDINATES: similar to AA sequence:RefSeq:WP_008278005.1
COORDINATES: similar to AA sequence:RefSeq:WP_009546255.1
COORDINATES: similar to AA sequence:RefSeq:WP_009546254.1
COORDINATES: similar to AA sequence:RefSeq:WP_009546253.1
COORDINATES: similar to AA sequence:RefSeq:WP_008278009.1
COORDINATES: similar to AA sequence:RefSeq:WP_009546251.1
COORDINATES: similar to AA sequence:RefSeq:WP_009546250.1
COORDINATES: similar to AA sequence:RefSeq:WP_009546249.1
COORDINATES: similar to AA sequence:RefSeq:WP_009546248.1
COORDINATES: similar to AA sequence:RefSeq:WP_009546247.1
COORDINATES: similar to AA sequence:RefSeq:WP_008278017.1
TraM recognition domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_009546245.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0003676 - nucleic acid binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_009546244.1
COORDINATES: similar to AA sequence:RefSeq:WP_009546243.1
type II toxin-antitoxin system VapC family toxin
COORDINATES: similar to AA sequence:RefSeq:WP_016516246.1
COORDINATES: similar to AA sequence:RefSeq:WP_009546241.1
COORDINATES: similar to AA sequence:RefSeq:WP_007309843.1
COORDINATES: similar to AA sequence:RefSeq:WP_009546239.1
GO:0003677 - DNA binding [Evidence IEA]; GO:0004803 - transposase activity [Evidence IEA]
GO:0006313 - transposition, DNA-mediated [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_009546236.1
COORDINATES: similar to AA sequence:RefSeq:WP_009546235.1
COORDINATES: similar to AA sequence:RefSeq:WP_009546234.1
COORDINATES: similar to AA sequence:RefSeq:WP_009546233.1
COORDINATES: similar to AA sequence:RefSeq:WP_009546232.1
COORDINATES: similar to AA sequence:RefSeq:WP_009546231.1
COORDINATES: similar to AA sequence:RefSeq:WP_009546230.1
COORDINATES: similar to AA sequence:RefSeq:WP_009546229.1
COORDINATES: similar to AA sequence:RefSeq:WP_009546228.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0004386 - helicase activity [Evidence IEA]; GO:0003676 - nucleic acid binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_009546227.1
COORDINATES: similar to AA sequence:RefSeq:WP_009546226.1
COORDINATES: similar to AA sequence:RefSeq:WP_009546225.1
COORDINATES: similar to AA sequence:RefSeq:WP_009546223.1
COORDINATES: similar to AA sequence:RefSeq:WP_009546220.1
peptidoglycan DD-metalloendopeptidase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_009546218.1
COORDINATES: similar to AA sequence:RefSeq:WP_009546217.1
COORDINATES: similar to AA sequence:RefSeq:WP_009546216.1
COORDINATES: similar to AA sequence:RefSeq:WP_009546215.1
COORDINATES: similar to AA sequence:RefSeq:WP_009546214.1
COORDINATES: similar to AA sequence:RefSeq:WP_009546213.1
COORDINATES: protein motif:HMM:TIGR02937.1
GO:0003677 - DNA binding [Evidence IEA]; GO:0016987 - sigma factor activity [Evidence IEA]
GO:0006352 - DNA-templated transcription initiation [Evidence IEA]
sigma-70 family RNA polymerase sigma factor
COORDINATES: similar to AA sequence:RefSeq:WP_009546210.1
GO:0016787 - hydrolase activity [Evidence IEA]
GO:0008152 - metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_009546209.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0016887 - ATP hydrolysis activity [Evidence IEA]
GO:0007059 - chromosome segregation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_009546208.1
COORDINATES: similar to AA sequence:RefSeq:WP_009546207.1
GO:0009318 - exodeoxyribonuclease VII complex [Evidence IEA]
GO:0008855 - exodeoxyribonuclease VII activity [Evidence IEA]
GO:0006308 - DNA catabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_007308410.1
COORDINATES: similar to AA sequence:RefSeq:WP_008278797.1
GO:0008080 - N-acetyltransferase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_009546204.1
type II toxin-antitoxin system HicB family antitoxin
COORDINATES: similar to AA sequence:RefSeq:WP_008278795.1
COORDINATES: similar to AA sequence:RefSeq:WP_008278464.1
COORDINATES: similar to AA sequence:RefSeq:WP_009546201.1
COORDINATES: similar to AA sequence:RefSeq:WP_009546200.1
COORDINATES: similar to AA sequence:RefSeq:WP_009546199.1
COORDINATES: protein motif:HMM:NF024180.2
COORDINATES: protein motif:HMM:NF023625.2
COORDINATES: similar to AA sequence:RefSeq:WP_009546195.1
COORDINATES: similar to AA sequence:RefSeq:WP_009546194.1
ShlB/FhaC/HecB family hemolysin secretion/activation protein
COORDINATES: similar to AA sequence:RefSeq:WP_009546192.1
COORDINATES: similar to AA sequence:RefSeq:WP_009546191.1
COORDINATES: similar to AA sequence:RefSeq:WP_009546190.1
COORDINATES: similar to AA sequence:RefSeq:WP_008278671.1
COORDINATES: similar to AA sequence:RefSeq:WP_009546187.1
COORDINATES: similar to AA sequence:RefSeq:WP_009546186.1
COORDINATES: similar to AA sequence:RefSeq:WP_009546184.1
COORDINATES: similar to AA sequence:RefSeq:WP_009546183.1
COORDINATES: similar to AA sequence:RefSeq:WP_009546182.1
COORDINATES: similar to AA sequence:RefSeq:WP_009546180.1
COORDINATES: similar to AA sequence:RefSeq:WP_009546179.1
GO:0004540 - ribonuclease activity [Evidence IEA]; GO:0003723 - RNA binding [Evidence IEA]
double-stranded RNA binding motif domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_009546178.1
COORDINATES: similar to AA sequence:RefSeq:WP_009546177.1
COORDINATES: similar to AA sequence:RefSeq:WP_009546176.1
COORDINATES: similar to AA sequence:RefSeq:WP_009546175.1
GO:0004521 - endoribonuclease activity [Evidence IEA]; GO:0005515 - protein binding [Evidence IEA]
putative toxin-antitoxin system toxin component, PIN family
COORDINATES: similar to AA sequence:RefSeq:WP_009546174.1
COORDINATES: similar to AA sequence:RefSeq:WP_009546173.1
COORDINATES: similar to AA sequence:RefSeq:WP_009546172.1
COORDINATES: similar to AA sequence:RefSeq:WP_009546171.1
GO:0030261 - chromosome condensation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_009546170.1
COORDINATES: similar to AA sequence:RefSeq:WP_009546169.1
COORDINATES: similar to AA sequence:RefSeq:WP_009546168.1
COORDINATES: similar to AA sequence:RefSeq:WP_009546167.1
GO:0004252 - serine-type endopeptidase activity [Evidence IEA]
GO:0006282 - regulation of DNA repair [Evidence IEA]; GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_008274984.1
IS5-like element ISCysp18 family transposase
COORDINATES: similar to AA sequence:RefSeq:WP_002737392.1
incomplete; partial in the middle of a contig; missing N-terminus and C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: protein motif:HMM:NF012920.2
COORDINATES: similar to AA sequence:RefSeq:WP_009546164.1
COORDINATES: similar to AA sequence:RefSeq:WP_009546163.1
COORDINATES: similar to AA sequence:RefSeq:WP_002804866.1
programmed frameshift; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_012593859.1
COORDINATES: similar to AA sequence:RefSeq:WP_009547831.1
COORDINATES: similar to AA sequence:RefSeq:WP_009547832.1
GO:0003700 - DNA-binding transcription factor activity [Evidence IEA]; GO:0043565 - sequence-specific DNA binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_007313358.1
COORDINATES: similar to AA sequence:RefSeq:WP_009547835.1
COORDINATES: similar to AA sequence:RefSeq:WP_009547836.1
COORDINATES: similar to AA sequence:RefSeq:WP_009547837.1
COORDINATES: similar to AA sequence:RefSeq:WP_009547838.1
COORDINATES: similar to AA sequence:RefSeq:WP_009547839.1
COORDINATES: similar to AA sequence:RefSeq:WP_009547841.1
COORDINATES: similar to AA sequence:RefSeq:WP_009547842.1
COORDINATES: similar to AA sequence:RefSeq:WP_009547843.1
COORDINATES: similar to AA sequence:RefSeq:WP_009543710.1
COORDINATES: similar to AA sequence:RefSeq:WP_008275376.1
COORDINATES: protein motif:HMM:NF022019.2
COORDINATES: protein motif:HMM:NF017832.2
COORDINATES: similar to AA sequence:RefSeq:WP_009547849.1
COORDINATES: similar to AA sequence:RefSeq:WP_008275051.1
COORDINATES: similar to AA sequence:RefSeq:WP_009547851.1
GO:0016765 - transferase activity, transferring alkyl or aryl (other than methyl) groups [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_009547852.1
COORDINATES: similar to AA sequence:RefSeq:WP_009547854.1
COORDINATES: similar to AA sequence:RefSeq:WP_009547855.1
COORDINATES: similar to AA sequence:RefSeq:WP_009547858.1
COORDINATES: similar to AA sequence:RefSeq:WP_009547859.1
COORDINATES: similar to AA sequence:RefSeq:WP_009544806.1
COORDINATES: protein motif:HMM:NF025000.2
COORDINATES: similar to AA sequence:RefSeq:WP_009548002.1
COORDINATES: similar to AA sequence:RefSeq:WP_008273828.1
phosphodiester glycosidase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_009547999.1
COORDINATES: similar to AA sequence:RefSeq:WP_009547998.1
COORDINATES: similar to AA sequence:RefSeq:WP_009547997.1
COORDINATES: similar to AA sequence:RefSeq:WP_009547996.1
COORDINATES: similar to AA sequence:RefSeq:WP_009547995.1
COORDINATES: similar to AA sequence:RefSeq:WP_009547994.1
GO:0004518 - nuclease activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_009547993.1
nuclear transport factor 2 family protein
COORDINATES: similar to AA sequence:RefSeq:WP_009547991.1
COORDINATES: similar to AA sequence:RefSeq:WP_009547990.1
COORDINATES: similar to AA sequence:RefSeq:WP_009547989.1
COORDINATES: similar to AA sequence:RefSeq:WP_009543265.1
COORDINATES: similar to AA sequence:RefSeq:WP_009548027.1
COORDINATES: similar to AA sequence:RefSeq:WP_009548028.1
COORDINATES: similar to AA sequence:RefSeq:WP_009547518.1
COORDINATES: similar to AA sequence:RefSeq:WP_008273819.1
COORDINATES: similar to AA sequence:RefSeq:WP_009547520.1
COORDINATES: similar to AA sequence:RefSeq:WP_009547522.1
COORDINATES: similar to AA sequence:RefSeq:WP_009547523.1
COORDINATES: similar to AA sequence:RefSeq:WP_009547524.1
type IV secretion system DNA-binding domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_009547525.1
COORDINATES: similar to AA sequence:RefSeq:WP_002746523.1
COORDINATES: similar to AA sequence:RefSeq:WP_009547527.1
COORDINATES: similar to AA sequence:RefSeq:WP_009547528.1
COORDINATES: similar to AA sequence:RefSeq:WP_009547529.1
GO:0016787 - hydrolase activity [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0003676 - nucleic acid binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_009547530.1
COORDINATES: similar to AA sequence:RefSeq:WP_009547531.1
COORDINATES: protein motif:HMM:NF033527.1
COORDINATES: similar to AA sequence:RefSeq:WP_009547533.1
COORDINATES: protein motif:HMM:NF017183.2
COORDINATES: protein motif:HMM:NF012798.2
COORDINATES: protein motif:HMM:NF013676.2
COORDINATES: similar to AA sequence:RefSeq:WP_015955833.1
internal stop; incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_009547539.1
COORDINATES: protein motif:HMM:NF017085.2
COORDINATES: similar to AA sequence:RefSeq:WP_009547542.1
COORDINATES: similar to AA sequence:RefSeq:WP_009547543.1
COORDINATES: protein motif:HMM:NF013180.2
COORDINATES: similar to AA sequence:RefSeq:WP_009547544.1
COORDINATES: similar to AA sequence:RefSeq:WP_013321724.1
GO:0030551 - cyclic nucleotide binding [Evidence IEA]
cyclic nucleotide-binding domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_009547546.1
COORDINATES: similar to AA sequence:RefSeq:WP_009547547.1
GO:0009358 - polyphosphate kinase complex [Evidence IEA]
GO:0008976 - polyphosphate kinase activity [Evidence IEA]
GO:0006799 - polyphosphate biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_009547548.1
COORDINATES: similar to AA sequence:RefSeq:WP_009547549.1
2,3-bisphosphoglycerate-dependent phosphoglycerate mutase
COORDINATES: similar to AA sequence:RefSeq:WP_009547550.1
GO:0004743 - pyruvate kinase activity [Evidence IEA]
GO:0006096 - glycolytic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_009547551.1
COORDINATES: similar to AA sequence:RefSeq:WP_009547552.1
GO:0004634 - phosphopyruvate hydratase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_009547553.1
COORDINATES: protein motif:HMM:NF012321.2
COORDINATES: similar to AA sequence:RefSeq:WP_006529553.1
COORDINATES: similar to AA sequence:RefSeq:WP_009547556.1
GO:0008776 - acetate kinase activity [Evidence IEA]; GO:0005524 - ATP binding [Evidence IEA]; GO:0000287 - magnesium ion binding [Evidence IEA]
GO:0006085 - acetyl-CoA biosynthetic process [Evidence IEA]; GO:0016310 - phosphorylation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_002802887.1
COORDINATES: similar to AA sequence:RefSeq:WP_009547558.1
COORDINATES: similar to AA sequence:RefSeq:WP_009547559.1
glycogen/starch/alpha-glucan phosphorylase
COORDINATES: similar to AA sequence:RefSeq:WP_002803774.1
GO:0004459 - L-lactate dehydrogenase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_009547561.1
NADP-dependent glyceraldehyde-3-phosphate dehydrogenase
COORDINATES: similar to AA sequence:RefSeq:WP_009547562.1
GO:0055052 - ATP-binding cassette (ABC) transporter complex, substrate-binding subunit-containing [Evidence IEA]; GO:0009898 - cytoplasmic side of plasma membrane [Evidence IEA]
GO:0005524 - ATP binding [Evidence IEA]; GO:0015415 - ATPase-coupled phosphate ion transmembrane transporter activity [Evidence IEA]
phosphate ABC transporter ATP-binding protein PstB
COORDINATES: similar to AA sequence:RefSeq:WP_009547563.1
COORDINATES: similar to AA sequence:RefSeq:WP_009547564.1
COORDINATES: similar to AA sequence:RefSeq:WP_076611616.1
IS3-like element ISCysp23 family transposase
COORDINATES: similar to AA sequence:RefSeq:WP_015785390.1
GO:0006813 - potassium ion transport [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_009547570.1
PstS family phosphate ABC transporter substrate-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_009547571.1
COORDINATES: similar to AA sequence:RefSeq:WP_009547573.1
COORDINATES: similar to AA sequence:RefSeq:WP_009547574.1
COORDINATES: similar to AA sequence:RefSeq:WP_009547575.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0016887 - ATP hydrolysis activity [Evidence IEA]; GO:0019829 - ATPase-coupled monoatomic cation transmembrane transporter activity [Evidence IEA]; GO:0043169 - cation binding [Evidence IEA]; GO:0015662 - P-type ion transporter activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_009544917.1
COORDINATES: similar to AA sequence:RefSeq:WP_009547577.1
COORDINATES: protein motif:HMM:NF013752.2
COORDINATES: similar to AA sequence:RefSeq:WP_012361632.1
COORDINATES: similar to AA sequence:RefSeq:WP_012593011.1
COORDINATES: similar to AA sequence:RefSeq:WP_007313357.1
COORDINATES: similar to AA sequence:RefSeq:WP_009547582.1
COORDINATES: similar to AA sequence:RefSeq:WP_009547583.1
COORDINATES: similar to AA sequence:RefSeq:WP_009547720.1
GO:0004520 - endodeoxyribonuclease activity [Evidence IEA]
GO:0006310 - DNA recombination [Evidence IEA]; GO:0006281 - DNA repair [Evidence IEA]
crossover junction endodeoxyribonuclease RuvC
COORDINATES: protein motif:HMM:NF024367.2
COORDINATES: protein motif:HMM:TIGR01613.1
COORDINATES: similar to AA sequence:RefSeq:WP_004094893.1
GO:0003676 - nucleic acid binding [Evidence IEA]; GO:0003723 - RNA binding [Evidence IEA]; GO:0001072 - transcription antitermination factor activity, RNA binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012362679.1
Rpn family recombination-promoting nuclease/putative transposase
COORDINATES: similar to AA sequence:RefSeq:WP_015783795.1