Crocosphaera subtropica ATCC 51142 plasmid D, complete sequence.
type: Entry
definition: Crocosphaera subtropica ATCC 51142 plasmid D, complete sequence.
sequence version: NC_010543.1
sequence date: 2023-04-17
sequence: sequence
division: CON
label: NC_010543.1
type: RefSeq
SIO_000068: refseq
dblink: PRJNA224116
dblink: SAMN02604312
keyword: RefSeq
source: Crocosphaera subtropica ATCC 51142
organism: Crocosphaera subtropica ATCC 51142
taxonomy: Bacteria; Cyanobacteriota; Cyanophyceae; Oscillatoriophycideae; Chroococcales; Aphanothecaceae; Crocosphaera; Crocosphaera subtropica.
reference: 1
references: 18812508
reference: 2
comment: REFSEQ INFORMATION: The reference sequence is identical to\nCP000811.1.\nBacteria available from the ATCC Cell Biology Collection: ATCC\n51142. Products annotated as 'unknown' have been observed in\nhigh-throughput proteomics experiments. Products annotated as\n'conserved hypothetical protein' have orthologs in at least 6 other\ncyanobacterial genomes.\nThe annotation was added by the NCBI Prokaryotic Genome Annotation\nPipeline (PGAP). Information about PGAP can be found here:\nhttps://www.ncbi.nlm.nih.gov/genome/annotation_prok/\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI RefSeq\nAnnotation Date :: 04/16/2023 01:44:35\nAnnotation Pipeline :: NCBI Prokaryotic Genome\n Annotation Pipeline (PGAP)\nAnnotation Method :: Best-placed reference protein\n set; GeneMarkS-2+\nAnnotation Software revision :: 6.5\nFeatures Annotated :: Gene; CDS; rRNA; tRNA; ncRNA\nGenes (total) :: 5,090\nCDSs (total) :: 5,037\nGenes (coding) :: 4,957\nCDSs (with protein) :: 4,957\nGenes (RNA) :: 53\nrRNAs :: 2, 2, 2 (5S, 16S, 23S)\ncomplete rRNAs :: 2, 2, 2 (5S, 16S, 23S)\ntRNAs :: 43\nncRNAs :: 4\nPseudo Genes (total) :: 80\nCDSs (without protein) :: 80\nPseudo Genes (ambiguous residues) :: 0 of 80\nPseudo Genes (frameshifted) :: 20 of 80\nPseudo Genes (incomplete) :: 48 of 80\nPseudo Genes (internal stop) :: 24 of 80\nPseudo Genes (multiple problems) :: 9 of 80\nCRISPR Arrays :: 3\n##Genome-Annotation-Data-END##\nCOMPLETENESS: full length.

sequence
subclass of: SO_0000155
sequence length: 10244
topology: circular
so has quality: SO_0000988
location: 1..10244
location: region:1-10244:1
RO_0002162: 43989

NC_010543
type: RefSeq
SIO_000068: refseq

PRJNA224116
type: BioProject
SIO_000068: bioproject

SAMN02604312
type: BioSample
SIO_000068: biosample

1
title: The genome of Cyanothece 51142, a unicellular diazotrophic cyanobacterium important in the marine nitrogen cycle
author: Welsh, E.A.
author: Liberton, M.
author: Stockel, J.
author: Loh, T.
author: Elvitigala, T.
author: Wang, C.
author: Wollam, A.
author: Fulton, R.S.
author: Clifton, S.W.
author: Jacobs, J.M.
author: Aurora, R.
author: Ghosh, B.K.
author: Sherman, L.A.
author: Smith, R.D.
author: Wilson, R.K.
author: Pakrasi, H.B.
journal: Proc Natl Acad Sci U S A
volume: 105
issue: 39
pages: 15094-15099
year: 2008
pubmed: 18812508

18812508
type: PubMed
SIO_000068: pubmed

2
title: Direct Submission
author: Welsh, E.A.
author: Liberton, M.
author: Stockel, J.
author: Sato, H.
author: Loh, T.
author: Wang, C.
author: Wollam, A.
author: Fulton, R.S.
author: Clifton, S.W.
author: Jacobs, J.M.
author: Aurora, R.
author: Sherman, L.A.
author: Smith, R.D.
author: Wilson, R.K.
author: Pakrasi, H.B.
journal: Submitted (22-AUG-2007) Department of Biology, Washington University in Saint Louis, One Brookings Drive, Campus Box 1137, Saint Louis, MO 63130, USA

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:10244:1
position: 10244
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-10244:1:source
so part of: sequence
organism: Crocosphaera subtropica ATCC 51142
mol type: genomic DNA
strain: ATCC 51142
culture collection: ATCC:51142
type material: reference strain of Crocosphaera subtropica
plasmid: D

43989
type: Taxonomy
SIO_000068: taxonomy

CCE_RS24950
type: Gene
subclass of: SO_0000704
RO_0002162: 43989
locus tag: CCE_RS24950
old locus tag: cce_5300
so part of: sequence
location: complement(1..657)
location: region:1-657:-1
so has part: feature:1-657:-1:exon
subclass of: SO_0000010

position:1:-1
position: 1
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:657:-1
position: 657
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1-657:-1:exon

CCE_RS24950
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 43989
locus tag: CCE_RS24950
old locus tag: cce_5300
inference: COORDINATES: similar to AA sequence:RefSeq:WP_009547976.1
GO function: GO:0003677 - DNA binding [Evidence IEA]
GO process: GO:0015074 - DNA integration [Evidence IEA]; GO:0006310 - DNA recombination [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: tyrosine-type recombinase/integrase
translation: MKRERHGKAKILTPEEIYLLFNQGLKTQRDRTLFGFCLYTACRINEAVTQLTADAYDRLGTVRPYMTIRKGNSKGKLASRTIPTSEDLRHLLGQYRPNSENEYLFPGRWNKGHLHPDSASLILRKACRSIGLEGVSTHSFRRTALTQMSDANIPFRVIAEISGHHNLTQLHAYLEVKPDQVKGAIASLSSLSYIGKSSFRDPQPLQDNSTPSPTHPHS
SIO_010081: CCE_RS24950
subclass of: SO_0000673
so part of: CCE_RS24950
location: complement(1..657)
location: region:1-657:-1
so has part: feature:1-657:-1:exon

WP_009547976.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1-657:-1:exon

CCE_RS26125
type: Gene
subclass of: SO_0000704
RO_0002162: 43989
locus tag: CCE_RS26125
old locus tag: cce_5301
so part of: sequence
location: complement(676..1170)
location: region:676-1170:-1
so has part: feature:676-1170:-1:exon
subclass of: SO_0000010

position:676:-1
position: 676
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1170:-1
position: 1170
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:676-1170:-1:exon

CCE_RS26125
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 43989
locus tag: CCE_RS26125
old locus tag: cce_5301
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012801518.1
GO function: GO:0003677 - DNA binding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: helix-turn-helix domain-containing protein
translation: MKRRNIASVDQDTGEVLDGVVVYCGVKQNPYSTGWVMNSQEALELLATDKDLKGETYRVLLLLLSRLDFENWIQVTQNEISEKLEMKKPNVSRAISVLEEKGIILRGPKVGRSYAFRLNPYYGWKGKVKNLNDYRREEDDQRRRDLKERHLKAVENATKSDQPE
SIO_010081: CCE_RS26125
subclass of: SO_0000673
so part of: CCE_RS26125
location: complement(676..1170)
location: region:676-1170:-1
so has part: feature:676-1170:-1:exon

WP_009547986.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:676-1170:-1:exon

CCE_RS24960
type: Gene
subclass of: SO_0000704
RO_0002162: 43989
locus tag: CCE_RS24960
old locus tag: cce_5302
so part of: sequence
location: 1466..2113
location: region:1466-2113:1
so has part: feature:1466-2113:1:exon
subclass of: SO_0000010

position:1466:1
position: 1466
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2113:1
position: 2113
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1466-2113:1:exon

CCE_RS24960
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 43989
locus tag: CCE_RS24960
old locus tag: cce_5302
inference: COORDINATES: similar to AA sequence:RefSeq:WP_009547985.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MKVSNFKKPLIYLILSVTLVNIFADKADAFKLELKRVGEWDQMIFNPFTGNKIGTITVPHFRLEKIEIQLGLNNTGKVFLDKGVLANNFLEDLGEGVIPVTMDGQEIAFDNTMFPDIPGSGFTTDTNNGTNFLITFDEPFTEPVGSIVDVSDMNILISTPLNVFDTSLVEGSVFNSAMTDSEPAEIVSTPEKSVSSITLLSLLGVGMFLKKKVNV
SIO_010081: CCE_RS24960
subclass of: SO_0000673
so part of: CCE_RS24960
location: 1466..2113
location: region:1466-2113:1
so has part: feature:1466-2113:1:exon

WP_009547985.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1466-2113:1:exon

CCE_RS24965
type: Gene
subclass of: SO_0000704
RO_0002162: 43989
locus tag: CCE_RS24965
old locus tag: cce_5303
so part of: sequence
location: complement(2321..3493)
location: region:2321-3493:-1
so has part: feature:2321-3493:-1:exon
subclass of: SO_0000010

position:2321:-1
position: 2321
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3493:-1
position: 3493
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2321-3493:-1:exon

CCE_RS24965
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 43989
locus tag: CCE_RS24965
old locus tag: cce_5303
inference: COORDINATES: similar to AA sequence:RefSeq:WP_009547984.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MFLFDNFSRKILSSLPSFISVFISLTMGSIPNAKAVPTLVNSDRFKVELFVDLASIDPDLDAFQLTISSGENGFPAGLYVTPGPSFLPGGNRLMRIDHAGTISIVTDQLNSAESMLFARGSYGDGILISEPRDQRIRRLLSDGTLTTFASNISSSPFGPPVLTYGPGGVIFATDGSIGSDSQASRDILQINSDGSSNVFASVSSAIFPEPTLTTFIHRHKPAAYASINDLGQWQEGGGFVTGTFSLQTDGEATMNDALFLVNLDGTSTLLVDGLSGLELIELGPGGVFGSDLFVATEGSSFGNDDGTLFTLKPDGTLIPFLTNIDAIDVAFDTEGILGGGLFVSDGTNRAGAGKIWRITSVTVPESSSLLSLFTFSILVISLIPKHKHNN
SIO_010081: CCE_RS24965
subclass of: SO_0000673
so part of: CCE_RS24965
location: complement(2321..3493)
location: region:2321-3493:-1
so has part: feature:2321-3493:-1:exon

WP_009547984.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2321-3493:-1:exon

CCE_RS24970
type: Gene
subclass of: SO_0000704
RO_0002162: 43989
locus tag: CCE_RS24970
old locus tag: cce_5304
so part of: sequence
location: complement(3596..5986)
location: region:3596-5986:-1
so has part: feature:3596-5986:-1:exon
subclass of: SO_0000010

position:3596:-1
position: 3596
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5986:-1
position: 5986
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3596-5986:-1:exon

CCE_RS24970
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 43989
locus tag: CCE_RS24970
old locus tag: cce_5304
inference: COORDINATES: similar to AA sequence:RefSeq:WP_009547983.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: toprim domain-containing protein
translation: MLLKFFDRGTGKGKAPVEYILKETDAKGIIRDPQPELIKGDPQQTINLIDSLNFKHKYRSGVLSFAPEDAPNNEQQQALINSFENVAFAGLDKDQYDILWVRHTHTGNDRVELHFVTPRVELTTGKSLNIAPPGWESYFRPWRDLWNTSQGWASPDDPERSRTYYPGHQALINAQNHRLELAGQTPISRDDARKIITNYLTAYIEEGQIQNRNDIITTLEDAAFTITRQGEDYITVTHDDLNKRIRLKGGIYSASWRLGQEPTTETATGQTATRADNQSRIKQAQEKLSENVSKRRDYHHQRYSSYSTEYQKPSEMDFTTARDNSYQPLNRFLDRQLGDDSIFNKTISTNSNQQNHPQSTQAEDLGDRTLSNQSREIHNITSQQQSQDQLEMQRQALLKAVEEDDEPTRKRATRNLQELCHSIREGQATTERTNDQLNQANQLTQQHHQQLIEQDNRTRKRLSRHHERLRKIADKQAEELHRCKQINLADYAQTQGYTIDKKKSSVNCLVLKDNQGDKILVGLNQADGHYFYSSVKDDRDSGSIIDFIQNKRNLNLGEVRKELRPWLNDTYSSTYTPKKSTPKLTPSTPDRHNILTQFERFKPITNHPYLTQRGINPQTTSNPKFQDKIYTDSRNNVIFPYHDREGICGYEIRNQQFKGFSKGGSKGLWFSKPASTDTKLVICESPLDCLSYHQLFPDANTRYMATGGTLSEKQKTLLKTAFEKIHSQGGQIIIATDKDEAGQGIAQELNNIAPSTAQLSRVVPNHHKDWNEALMAQLRWEREQEQKRSRGRGFSL
SIO_010081: CCE_RS24970
subclass of: SO_0000673
so part of: CCE_RS24970
location: complement(3596..5986)
location: region:3596-5986:-1
so has part: feature:3596-5986:-1:exon

WP_009547983.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3596-5986:-1:exon

CCE_RS24975
type: Gene
subclass of: SO_0000704
RO_0002162: 43989
locus tag: CCE_RS24975
old locus tag: cce_5305
so part of: sequence
location: complement(5976..6335)
location: region:5976-6335:-1
so has part: feature:5976-6335:-1:exon
subclass of: SO_0000010

position:5976:-1
position: 5976
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6335:-1
position: 6335
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5976-6335:-1:exon

CCE_RS24975
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 43989
locus tag: CCE_RS24975
old locus tag: cce_5305
inference: COORDINATES: similar to AA sequence:RefSeq:WP_008278989.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: MobC family plasmid mobilization relaxosome protein
translation: MTEKRNINLTIRVTPSEKLAWQEKAVLSGLTLSNLIRQAMSKTRTWTASNSSLVQEQTRQIARIGNNLNQIAKWANTYKQTAEAIEVIQALRLIQETLHELSVKSDKPSPNSEDNEDVT
SIO_010081: CCE_RS24975
subclass of: SO_0000673
so part of: CCE_RS24975
location: complement(5976..6335)
location: region:5976-6335:-1
so has part: feature:5976-6335:-1:exon

WP_009547982.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:5976-6335:-1:exon

CCE_RS25685
type: Gene
subclass of: SO_0000704
RO_0002162: 43989
locus tag: CCE_RS25685
old locus tag: cce_5306
so part of: sequence
location: 6773..6931
location: region:6773-6931:1
so has part: feature:6773-6931:1:exon
subclass of: SO_0000010

position:6773:1
position: 6773
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6931:1
position: 6931
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6773-6931:1:exon

CCE_RS25685
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 43989
locus tag: CCE_RS25685
old locus tag: cce_5306
inference: COORDINATES: protein motif:HMM:NF015630.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: UPF0175 family protein
translation: MVKRLFEIGKLTVGQAAELAGYSKPTFIELLGKLGVPVIDYPPQELEEEKIT
SIO_010081: CCE_RS25685
subclass of: SO_0000673
so part of: CCE_RS25685
location: 6773..6931
location: region:6773-6931:1
so has part: feature:6773-6931:1:exon

WP_009547981.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:6773-6931:1:exon

CCE_RS24980
type: Gene
subclass of: SO_0000704
RO_0002162: 43989
locus tag: CCE_RS24980
old locus tag: cce_5307
so part of: sequence
location: complement(7203..7490)
location: region:7203-7490:-1
so has part: feature:7203-7490:-1:exon
subclass of: SO_0000010

position:7203:-1
position: 7203
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7490:-1
position: 7490
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7203-7490:-1:exon

CCE_RS24980
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 43989
locus tag: CCE_RS24980
old locus tag: cce_5307
inference: COORDINATES: similar to AA sequence:RefSeq:WP_009547980.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MFYNYPDHTLVYWRNEQSGQLPNAVKKLFSNSSNFNQEDADLIRGYLKHWTSFKGHYFPKEDDRQALLNQLDQAQSIKDFNRITKELLTYAIDPF
SIO_010081: CCE_RS24980
subclass of: SO_0000673
so part of: CCE_RS24980
location: complement(7203..7490)
location: region:7203-7490:-1
so has part: feature:7203-7490:-1:exon

WP_009547980.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:7203-7490:-1:exon

CCE_RS24985
type: Gene
subclass of: SO_0000704
RO_0002162: 43989
locus tag: CCE_RS24985
old locus tag: cce_5308
so part of: sequence
location: complement(7524..8279)
location: region:7524-8279:-1
so has part: feature:7524-8279:-1:exon
subclass of: SO_0000010

position:7524:-1
position: 7524
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8279:-1
position: 8279
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7524-8279:-1:exon

CCE_RS24985
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 43989
locus tag: CCE_RS24985
old locus tag: cce_5308
inference: COORDINATES: similar to AA sequence:RefSeq:WP_008278918.1
GO function: GO:0004518 - nuclease activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: GIY-YIG nuclease family protein
translation: MAKTQSTSSFTIRCPSELMKGIDEQVEQTRQNKTDVIIGMLLSSIPSVHITERVKLPSQPGIYFVYTLDHQLLYIGKADNLRTRWNSHHKYQYFIESSMDSRIGYFTFDSVDNLNQTIEEFQSEPTETIQTKALVTSDQFEKLEQELTTLKKQFNDTLSVLVQLGSEKVVKKLQNYLPKRGLQEWNPSSEDLREGVTRSGLAKHFGFNTVKDLEDAASLLEVDPIEYLEELSGWKYRPTEEGSSLSKFFQS
SIO_010081: CCE_RS24985
subclass of: SO_0000673
so part of: CCE_RS24985
location: complement(7524..8279)
location: region:7524-8279:-1
so has part: feature:7524-8279:-1:exon

WP_009547979.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:7524-8279:-1:exon

CCE_RS24990
type: Gene
subclass of: SO_0000704
RO_0002162: 43989
locus tag: CCE_RS24990
old locus tag: cce_5309
so part of: sequence
location: 8885..9370
location: region:8885-9370:1
so has part: feature:8885-9370:1:exon
subclass of: SO_0000010

position:8885:1
position: 8885
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9370:1
position: 9370
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8885-9370:1:exon

CCE_RS24990
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 43989
locus tag: CCE_RS24990
old locus tag: cce_5309
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MLNRLNWPEIVGGIIGSILTVFGLYLFDKIGLISSEIVIPSKAIIPFNSNECPSGWSDYSQSAGRFIIGVGQGSNLTERRLGDLGGTEKHMLTVDEIPQHYHNYEDYHYYDQEIGDPNYQTPQGDETGILKYREGQTTEIGGGKPHENIPPFVALKYCEKE
SIO_010081: CCE_RS24990
subclass of: SO_0000673
so part of: CCE_RS24990
location: 8885..9370
location: region:8885-9370:1
so has part: feature:8885-9370:1:exon

WP_009547978.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:8885-9370:1:exon

CCE_RS24995
type: Gene
subclass of: SO_0000704
RO_0002162: 43989
locus tag: CCE_RS24995
old locus tag: cce_5310
so part of: sequence
location: complement(9426..9944)
location: region:9426-9944:-1
so has part: feature:9426-9944:-1:exon
subclass of: SO_0000010

position:9426:-1
position: 9426
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9944:-1
position: 9944
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9426-9944:-1:exon

CCE_RS24995
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 43989
locus tag: CCE_RS24995
old locus tag: cce_5310
inference: COORDINATES: similar to AA sequence:RefSeq:WP_009547977.1
GO process: GO:0006260 - DNA replication [Evidence IEA]; GO:0006276 - plasmid maintenance [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: replication/maintenance protein RepL
translation: MDKTAATTEDRLQRFIQLVDERLNEEQKNKDRKKNKNFVQMYPKGFDRVIGILGEYPLAARIYMFLAKHIEPGTGAVVASQQLLADELDISIRSVQRGTKWLDENNIVLRIKLGAGTVYAYCLDPDEVWKSWNTSKKYAAFTTKTLARKEDNGDVKRRLMVMLKGKETEPET
SIO_010081: CCE_RS24995
subclass of: SO_0000673
so part of: CCE_RS24995
location: complement(9426..9944)
location: region:9426-9944:-1
so has part: feature:9426-9944:-1:exon

WP_009547977.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:9426-9944:-1:exon