Crocosphaera subtropica ATCC 51142 plasmid B, complete sequence.
type: Entry
definition: Crocosphaera subtropica ATCC 51142 plasmid B, complete sequence.
sequence version: NC_010541.1
sequence date: 2023-04-17
sequence: sequence
division: CON
label: NC_010541.1
type: RefSeq
SIO_000068: refseq
dblink: PRJNA224116
dblink: SAMN02604312
keyword: RefSeq
source: Crocosphaera subtropica ATCC 51142
organism: Crocosphaera subtropica ATCC 51142
taxonomy: Bacteria; Cyanobacteriota; Cyanophyceae; Oscillatoriophycideae; Chroococcales; Aphanothecaceae; Crocosphaera; Crocosphaera subtropica.
reference: 1
references: 18812508
reference: 2
comment: REFSEQ INFORMATION: The reference sequence is identical to\nCP000809.1.\nBacteria available from the ATCC Cell Biology Collection: ATCC\n51142. Products annotated as 'unknown' have been observed in\nhigh-throughput proteomics experiments. Products annotated as\n'conserved hypothetical protein' have orthologs in at least 6 other\ncyanobacterial genomes.\nThe annotation was added by the NCBI Prokaryotic Genome Annotation\nPipeline (PGAP). Information about PGAP can be found here:\nhttps://www.ncbi.nlm.nih.gov/genome/annotation_prok/\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI RefSeq\nAnnotation Date :: 04/16/2023 01:44:35\nAnnotation Pipeline :: NCBI Prokaryotic Genome\n Annotation Pipeline (PGAP)\nAnnotation Method :: Best-placed reference protein\n set; GeneMarkS-2+\nAnnotation Software revision :: 6.5\nFeatures Annotated :: Gene; CDS; rRNA; tRNA; ncRNA\nGenes (total) :: 5,090\nCDSs (total) :: 5,037\nGenes (coding) :: 4,957\nCDSs (with protein) :: 4,957\nGenes (RNA) :: 53\nrRNAs :: 2, 2, 2 (5S, 16S, 23S)\ncomplete rRNAs :: 2, 2, 2 (5S, 16S, 23S)\ntRNAs :: 43\nncRNAs :: 4\nPseudo Genes (total) :: 80\nCDSs (without protein) :: 80\nPseudo Genes (ambiguous residues) :: 0 of 80\nPseudo Genes (frameshifted) :: 20 of 80\nPseudo Genes (incomplete) :: 48 of 80\nPseudo Genes (internal stop) :: 24 of 80\nPseudo Genes (multiple problems) :: 9 of 80\nCRISPR Arrays :: 3\n##Genome-Annotation-Data-END##\nCOMPLETENESS: full length.

sequence
subclass of: SO_0000155
sequence length: 31856
topology: circular
so has quality: SO_0000988
location: 1..31856
location: region:1-31856:1
RO_0002162: 43989

NC_010541
type: RefSeq
SIO_000068: refseq

PRJNA224116
type: BioProject
SIO_000068: bioproject

SAMN02604312
type: BioSample
SIO_000068: biosample

1
title: The genome of Cyanothece 51142, a unicellular diazotrophic cyanobacterium important in the marine nitrogen cycle
author: Welsh, E.A.
author: Liberton, M.
author: Stockel, J.
author: Loh, T.
author: Elvitigala, T.
author: Wang, C.
author: Wollam, A.
author: Fulton, R.S.
author: Clifton, S.W.
author: Jacobs, J.M.
author: Aurora, R.
author: Ghosh, B.K.
author: Sherman, L.A.
author: Smith, R.D.
author: Wilson, R.K.
author: Pakrasi, H.B.
journal: Proc Natl Acad Sci U S A
volume: 105
issue: 39
pages: 15094-15099
year: 2008
pubmed: 18812508

18812508
type: PubMed
SIO_000068: pubmed

2
title: Direct Submission
author: Welsh, E.A.
author: Liberton, M.
author: Stockel, J.
author: Sato, H.
author: Loh, T.
author: Wang, C.
author: Wollam, A.
author: Fulton, R.S.
author: Clifton, S.W.
author: Jacobs, J.M.
author: Aurora, R.
author: Sherman, L.A.
author: Smith, R.D.
author: Wilson, R.K.
author: Pakrasi, H.B.
journal: Submitted (22-AUG-2007) Department of Biology, Washington University in Saint Louis, One Brookings Drive, Campus Box 1137, Saint Louis, MO 63130, USA

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:31856:1
position: 31856
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-31856:1:source
so part of: sequence
organism: Crocosphaera subtropica ATCC 51142
mol type: genomic DNA
strain: ATCC 51142
culture collection: ATCC:51142
type material: reference strain of Crocosphaera subtropica
plasmid: B

43989
type: Taxonomy
SIO_000068: taxonomy

CCE_RS24750
type: Gene
subclass of: SO_0000704
RO_0002162: 43989
locus tag: CCE_RS24750
old locus tag: cce_5256
so part of: sequence
location: 102..926
location: region:102-926:1
so has part: feature:102-926:1:exon
subclass of: SO_0000010

position:102:1
position: 102
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:926:1
position: 926
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:102-926:1:exon

CCE_RS24750
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 43989
locus tag: CCE_RS24750
old locus tag: cce_5256
inference: COORDINATES: similar to AA sequence:RefSeq:WP_008276295.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MNPQNLQSLKKTMAFKVSVAMVPILTISSLIISPSAQAGQMNPGFENGLANWTPSGDVSLDTGLLGSGPLFGNSQALLTTASLEQDDSPSPAGAFNFSGNSAVSTGSPSDLETALGLSPGDLDISPFLQAFEGSAIVQSFTVEEGETISFSWNFLTNDSNSDFPLTFGSPRDYAFIVLDGTITTLADTNSSLLSSSSTLFNQETGFQTFTSNPLTAGVYTLGIGIVDIQDTASTSALLIDAPQETPVTTPEPSSKLGLLLLITLGVSSLVKRWS
SIO_010081: CCE_RS24750
subclass of: SO_0000673
so part of: CCE_RS24750
location: 102..926
location: region:102-926:1
so has part: feature:102-926:1:exon

WP_009547884.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:102-926:1:exon

CCE_RS24755
type: Gene
subclass of: SO_0000704
RO_0002162: 43989
locus tag: CCE_RS24755
old locus tag: cce_5257
so part of: sequence
location: 1436..2026
location: region:1436-2026:1
so has part: feature:1436-2026:1:exon
subclass of: SO_0000010

position:1436:1
position: 1436
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2026:1
position: 2026
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1436-2026:1:exon

CCE_RS24755
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 43989
locus tag: CCE_RS24755
old locus tag: cce_5257
inference: COORDINATES: similar to AA sequence:RefSeq:WP_009547885.1
GO function: GO:0005524 - ATP binding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ParA family protein
translation: MIITVASFKGGVGKSTTALHLAAYCQQLAPSLLVDGDLNRSALDWASRGQLPFKVVDEKQGVKYARNYEHIIIDTPARPAPDDLKTIAEGCDLLILPTSPDALALGATLQMVDALHSLEANYRILLTLIPPRPSKAGSEARTAIKNAQLPLFKTGIRRLAVFQKAALEGVPVNQVKDPYANAAWDCYVKVGQEILP
SIO_010081: CCE_RS24755
subclass of: SO_0000673
so part of: CCE_RS24755
location: 1436..2026
location: region:1436-2026:1
so has part: feature:1436-2026:1:exon

WP_009547885.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1436-2026:1:exon

CCE_RS24760
type: Gene
subclass of: SO_0000704
RO_0002162: 43989
locus tag: CCE_RS24760
old locus tag: cce_5258
so part of: sequence
location: 2023..2283
location: region:2023-2283:1
so has part: feature:2023-2283:1:exon
subclass of: SO_0000010

position:2023:1
position: 2023
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2283:1
position: 2283
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2023-2283:1:exon

CCE_RS24760
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 43989
locus tag: CCE_RS24760
old locus tag: cce_5258
inference: COORDINATES: similar to AA sequence:RefSeq:WP_009547886.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MNKKPSSRFDDLFSAARNKTQETSSESTKTSPTKKSKSRDPDYVRTTIYLPKRLHQQLKVAAVQGDKDMSEIIEGLVDAWVQSEDT
SIO_010081: CCE_RS24760
subclass of: SO_0000673
so part of: CCE_RS24760
location: 2023..2283
location: region:2023-2283:1
so has part: feature:2023-2283:1:exon

WP_009547886.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2023-2283:1:exon

CCE_RS24765
type: Gene
subclass of: SO_0000704
RO_0002162: 43989
locus tag: CCE_RS24765
old locus tag: cce_5259
so part of: sequence
location: 2461..2736
location: region:2461-2736:1
so has part: feature:2461-2736:1:exon
subclass of: SO_0000010

position:2461:1
position: 2461
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2736:1
position: 2736
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2461-2736:1:exon

CCE_RS24765
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 43989
locus tag: CCE_RS24765
old locus tag: cce_5259
inference: COORDINATES: similar to AA sequence:RefSeq:WP_009547887.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MSNSLTSSEHNVLRPEDFDPPLKRKKATIPGYWTIEEIANEIGVTPRRVRYDITGRPETKIEPSLEAYRIGNSLLVAEQNALEYIQRQRKR
SIO_010081: CCE_RS24765
subclass of: SO_0000673
so part of: CCE_RS24765
location: 2461..2736
location: region:2461-2736:1
so has part: feature:2461-2736:1:exon

WP_009547887.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2461-2736:1:exon

CCE_RS24770
type: Gene
subclass of: SO_0000704
RO_0002162: 43989
locus tag: CCE_RS24770
old locus tag: cce_5262
so part of: sequence
location: 2973..6722
location: region:2973-6722:1
so has part: feature:2973-6722:1:exon
subclass of: SO_0000010

position:2973:1
position: 2973
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6722:1
position: 6722
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2973-6722:1:exon

CCE_RS24770
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 43989
locus tag: CCE_RS24770
old locus tag: cce_5262
inference: COORDINATES: similar to AA sequence:RefSeq:WP_009547888.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MRNQLTPTNRFNPCPICTDHSGDCRISGDTMILCHGYIDSDSPLSGWKWTKTSSNGVWGVHIVDDGKEFNREQWERDKLLRQQRELDKLNFLGKNALPIGQRDQSYKRLSKYLGLGDRHRKDLQKRGLSDLQIDEIPFFSLDQYSPIPSGIPDNLPGIGTDYYSGNVKFCVSDPGYFCPSFDIKGKINGGQVRYETKNNKYRWLKGVFSSHLPNGELPITLVRGYKGTKGQEDSKDATQTNHPPDPTKNELEDPSTDSKVSNPLYLVEGILKPVIASKNLKIDVCGASGGHFKGSPKQFKEIIARYQTLILCPDAGDILNPQVMQRWLSQIEFIKSLELGHTLKILWWGQTIKNSSDLDEIHRERFRKANEISVDHFLEIANLEQYREKTQKAWQTTKHFTPDVTIDQTFINLPCPQDNTILCLKSGLGTGKTTDLIKHLNGYENENGEWINGQWFGEGAVNLGYRNTLLLQFCEKSGFLHIHHDSRFIDITKPYSRTAACVNSLLRHYTLESFDDKILILDEVVSIIKHLLFSGTIRQRSETIAMFMEAIKRAKTVVCLDGNLSDMYCQFMATCDPSKRLIKVENTYQGNKPELILLEGTINNKGNLRKRDNAPWLNALLNTAELPVVAADSQILLESIDDLFIAQGRKGIRIDSKTINQKKVKAFLKDPVAWIKKHQPDYLLFSPSCESGLDVAITNYFSHFFGFFFGVIDADAITQIIARVRDANLTRYLWVMPYIKQDNPDNINSPLVENLQYHLNQRLVSDIHNVMSGLADAEKLISEIVTEFKDSQNTPQHQLAQRIQAMKNYEKSNLRECVYWLLAEFGYDISQRVAPLEDAQVKATGKKVSETNKLNKQSNSKDIANASDKYIGQPETLLNYDASWEERCALMKAWIVNTLPGIHEQEIWSGDFVYQIKYEYPNLINQLEDRYLLHNLDKCKERSQRIYHSQLVKGRLGNTLTPWKHNPRYLRLKVLETIGLKDFIHNHYDLEFTSDYEPLQAILKQCRYKKHWQDLGKKPGSNPMRYFKWLLNQIGYSLISRRIKTKEKRDSYVYRICSVPDAKCAYLIDPIMAAIATRYEQDKPRLNWDEGREHILQIETMLQETRVNNAPKIFNHDNAENPPPERIMDGLKPPNTLGEGLTVIAQELDTTNKPNSGNEDHVSAIVSASNSDKGDQLSDVPEKPTQPQASEDEGFHWKDIINDMNRHLKRIGWTIEKGRNYLNSRYGVRSRLQLTDDQLIEFWDFLKMA
SIO_010081: CCE_RS24770
subclass of: SO_0000673
so part of: CCE_RS24770
location: 2973..6722
location: region:2973-6722:1
so has part: feature:2973-6722:1:exon

WP_009547888.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2973-6722:1:exon

CCE_RS24775
type: Gene
subclass of: SO_0000704
RO_0002162: 43989
locus tag: CCE_RS24775
old locus tag: cce_5263
so part of: sequence
location: complement(6790..7182)
location: region:6790-7182:-1
so has part: feature:6790-7182:-1:exon
subclass of: SO_0000010

position:6790:-1
position: 6790
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7182:-1
position: 7182
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6790-7182:-1:exon

CCE_RS24775
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 43989
locus tag: CCE_RS24775
old locus tag: cce_5263
inference: COORDINATES: similar to AA sequence:RefSeq:WP_008278103.1
GO function: GO:0016301 - kinase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: type II toxin-antitoxin system death-on-curing family toxin
translation: MREPIWITERMARAIHSQQLALFGGASGILDEGKLSSALARSKHLYTYQQDVSLYELAAAIGWGVAKNHPFVDGNKRTAFVVMAVFLKVNGIDLIAPEVEVVTVMLALAAGELSEQQLNDWLADNSTERQ
SIO_010081: CCE_RS24775
subclass of: SO_0000673
so part of: CCE_RS24775
location: complement(6790..7182)
location: region:6790-7182:-1
so has part: feature:6790-7182:-1:exon

WP_012358617.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:6790-7182:-1:exon

CCE_RS24780
type: Gene
subclass of: SO_0000704
RO_0002162: 43989
locus tag: CCE_RS24780
old locus tag: cce_5264
so part of: sequence
location: complement(7179..7400)
location: region:7179-7400:-1
so has part: feature:7179-7400:-1:exon
subclass of: SO_0000010

position:7179:-1
position: 7179
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7400:-1
position: 7400
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7179-7400:-1:exon

CCE_RS24780
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 43989
locus tag: CCE_RS24780
old locus tag: cce_5264
inference: COORDINATES: similar to AA sequence:RefSeq:WP_008278102.1
GO function: GO:0003677 - DNA binding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: AbrB/MazE/SpoVT family DNA-binding domain-containing protein
translation: MKLKLRKIGNSIGTTFPKEILDKLQVNEGDTLYLTETPDGIELTAYDPEFEQVMEAAGEITRHYRNALKELAK
SIO_010081: CCE_RS24780
subclass of: SO_0000673
so part of: CCE_RS24780
location: complement(7179..7400)
location: region:7179-7400:-1
so has part: feature:7179-7400:-1:exon

WP_008278102.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:7179-7400:-1:exon

CCE_RS24785
type: Gene
subclass of: SO_0000704
RO_0002162: 43989
gene: mobF
locus tag: CCE_RS24785
old locus tag: cce_5265
so part of: sequence
location: complement(7624..11418)
location: region:7624-11418:-1
so has part: feature:7624-11418:-1:exon
subclass of: SO_0000010

position:7624:-1
position: 7624
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:11418:-1
position: 11418
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7624-11418:-1:exon

CCE_RS24785
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 43989
gene: mobF
locus tag: CCE_RS24785
old locus tag: cce_5265
inference: COORDINATES: similar to AA sequence:RefSeq:WP_009547890.1
GO function: GO:0003677 - DNA binding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: MobF family relaxase
translation: MLTIKNVNAELAKTYFEKGYYEEGRWFGEGAANLNLTGEIKNHDAYNNLLDGQSPDGNHCLMGRKIKGNQHRAAIDCTFNAPKSVSLQALVGGDERLIEAHRKAVNQTLALMESRYAQSRILKKGQPRQVVQTGKLAVAQFDHIETRNLDPHLHTHCVVMNVTQRDDGQWRSLHNDAIYRQQKLLGMVYQHNLALELRKLGYQVEAKQHGQFEIAGYEKKDLEFFSKRRQQILAEAGENASVVERNIAWGNTRVKKEVVSPSELKQKWQREASELGVKFVNPNTGLDKKGEGLGEQREQREQRKQREQREQREQREQRSRGSDYQANQGNIDQNAISQPSPIKANIVNDAIAHCEERAVAFRLEEVEKFILLNGQPINIKNLDKTIGQHSQLINVSDNLNRRYTTEAALQRELATIRLMLEGKNKERPICSEAKINQGLAPISLTEGQQEAITTALSSRDTVMAWQGVAGAGKTYALNHFTTLSQKNGYSVKGFAPSAEAAKVLGFEVGIKADTVASLLYSKQAKQVEPNQIWIVDEAGLLSAKAAYELLKRAKAENARVLLVGDTRQLSAVEAGNPFKSLQAAGMTTARMNQSLRQRTPELQTAVDFISKGEIDAGFGILNQANCLIEVAEEEKINQIVNDYLKIPEADREKTLILAGTNAERLAITQTIRQGLKEEGKLGEGVKLTQLKSKDLTRVQMRFTHHLEIGDLVSPAFNYKQRQLSKGELYEIIDKDVDSLTLKDSTGNRVKVDPLFEKAVYGSSEIEIAVGDRLKWTKNDRKQGRRNGQEFTVKAIEGTIATIEYKDGQQDSFNFSVPQHLDYGLVSTTYSSQGKTADQVLISADYTVGKESFYVAVSRVKSDLKLYTLDKDNLLDLAKASRAKKNPLELLRARQKALLKGKYKTKERGADGKEVSSFTTQPSSVSVVDSSSNVTNVPQEKPVTTVSSFPSNKKPIRDKDEKLIENYNQISDEELKPLEQKASQSVKRNLEIETKKNRDLTNPIPESVSQSKIISDEKIETDNDTILSEVTESEAVTNAEVKKPNNHLDKEIAEPLIIFNEADANLNKKLKELLDTLAKSNQLSDENQQRLQELAERLKGDKNQKETTEKKAVKKQPIEKQSSVSPTPKQTVKPSQNKPDASKTTLQTPSSEQRLADLNNVKAIESLTKLMQFLNIPPQHGWRRLKRPRYMIKASTDYETIELYSASQRGLILQKKDGRIQGNLNEKDRELIAQIDPEIEQRLNQLKQKLVQKSQQRSRDNGLSL
SIO_010081: CCE_RS24785
subclass of: SO_0000673
so part of: CCE_RS24785
location: complement(7624..11418)
location: region:7624-11418:-1
so has part: feature:7624-11418:-1:exon

WP_009547890.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:7624-11418:-1:exon

CCE_RS24790
type: Gene
subclass of: SO_0000704
RO_0002162: 43989
locus tag: CCE_RS24790
old locus tag: cce_5266
so part of: sequence
location: complement(11405..11764)
location: region:11405-11764:-1
so has part: feature:11405-11764:-1:exon
subclass of: SO_0000010

position:11405:-1
position: 11405
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:11764:-1
position: 11764
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11405-11764:-1:exon

CCE_RS24790
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 43989
locus tag: CCE_RS24790
old locus tag: cce_5266
inference: COORDINATES: similar to AA sequence:RefSeq:WP_008278098.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MIVEEKSWPKRQLQIECKEISDRLLFDGSLRKEVVYIYPLKFTDWVALLFTRYHSSAVELIKALPEIDRFFYQNKVNRFKQISIWCIRTELSESLITQLKALPDLQLEPLVEEEGNADH
SIO_010081: CCE_RS24790
subclass of: SO_0000673
so part of: CCE_RS24790
location: complement(11405..11764)
location: region:11405-11764:-1
so has part: feature:11405-11764:-1:exon

WP_009547891.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:11405-11764:-1:exon

CCE_RS24795
type: Gene
subclass of: SO_0000704
RO_0002162: 43989
locus tag: CCE_RS24795
old locus tag: cce_5267
so part of: sequence
location: 12133..13617
location: region:12133-13617:1
so has part: feature:12133-13617:1:exon
subclass of: SO_0000010

position:12133:1
position: 12133
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:13617:1
position: 13617
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:12133-13617:1:exon

CCE_RS24795
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 43989
locus tag: CCE_RS24795
old locus tag: cce_5267
inference: COORDINATES: similar to AA sequence:RefSeq:WP_008278097.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MPDLILALDFGASATKIAYRSGSTEGSSKFEVVMMPPDIEPIDRDKLERYQTRDTIVVTQVPEIEEIWIETKDKLYAVGHLARLFEPVDKIKDVKYEVAAYKTLAAMGYVLSTLTQQNQLPKKKNYKIALAVVLPWEEFPDKDRFKSFLELLLSNWKYRDKKWGIKLESFSVRQEGFGLFYLYQKSMFKPSLDRMAILMFGHRNISALYFKDKKLHSGSSPLLGFHQVFDRVAQSISWLDRQTIVNTFETIWQNHRQAFFKTTYIEKKPENQPLLQRWRIKVGTYHHYVAIEMKFPNWAALKPIQDLARASDPDLRQREINDIAHAITLALEEYIESFQKWYNSMFPEPLSTIVISGGASWFIRPLLSEWFSEGIGVGFNLGYNNSLQRLSEYQSAKSLDEVGLSIYLSNFPDSLSDWEKRRNWFHVSPIYRPYEANPRGIEKEIVKERRLYFTMSKYSQIPNLNAYESFSFSYQRKADVIGLGAYLMDKTLKT
SIO_010081: CCE_RS24795
subclass of: SO_0000673
so part of: CCE_RS24795
location: 12133..13617
location: region:12133-13617:1
so has part: feature:12133-13617:1:exon

WP_009547892.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:12133-13617:1:exon

CCE_RS24800
type: Gene
subclass of: SO_0000704
RO_0002162: 43989
locus tag: CCE_RS24800
old locus tag: cce_5268
so part of: sequence
location: 13654..14136
location: region:13654-14136:1
so has part: feature:13654-14136:1:exon
subclass of: SO_0000010

position:13654:1
position: 13654
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:14136:1
position: 14136
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:13654-14136:1:exon

CCE_RS24800
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 43989
locus tag: CCE_RS24800
old locus tag: cce_5268
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MKLLTGVNMDKGRKNFHIRLQPDSESLLGEVIDYLQTLKKEELNKRVGELLVAAFLPLARYHQNTSDSEELRITCINSCDALSRHSEYLRQLLKVNHPTTLHLVLSSNVVADPNQIVSQVTHQASPVVNQTPEQNGDKEVEEDSSPPLEETDDVFGGFDD
SIO_010081: CCE_RS24800
subclass of: SO_0000673
so part of: CCE_RS24800
location: 13654..14136
location: region:13654-14136:1
so has part: feature:13654-14136:1:exon

WP_156922881.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:13654-14136:1:exon

CCE_RS24805
type: Gene
subclass of: SO_0000704
RO_0002162: 43989
locus tag: CCE_RS24805
old locus tag: cce_5269
so part of: sequence
location: complement(14173..14559)
location: region:14173-14559:-1
so has part: feature:14173-14559:-1:exon
subclass of: SO_0000010

position:14173:-1
position: 14173
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:14559:-1
position: 14559
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:14173-14559:-1:exon

CCE_RS24805
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 43989
locus tag: CCE_RS24805
old locus tag: cce_5269
inference: COORDINATES: similar to AA sequence:RefSeq:WP_009547894.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: HNH endonuclease
translation: MKNRDRYPDDWDEIALRVKQSANWTCSKCGQICLSPDDKLSINLCPTILYKAIHPLSLLLFWLIIIQQWLTDKSVRTKYTLTVHHSDYDPSNNHESNLIPLCSACHLYLHRGQRGNISPGQLKLELEV
SIO_010081: CCE_RS24805
subclass of: SO_0000673
so part of: CCE_RS24805
location: complement(14173..14559)
location: region:14173-14559:-1
so has part: feature:14173-14559:-1:exon

WP_009547894.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:14173-14559:-1:exon

CCE_RS24810
type: Gene
subclass of: SO_0000704
RO_0002162: 43989
locus tag: CCE_RS24810
old locus tag: cce_5270
so part of: sequence
location: 14886..15347
location: region:14886-15347:1
so has part: feature:14886-15347:1:exon
subclass of: SO_0000010

position:14886:1
position: 14886
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:15347:1
position: 15347
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:14886-15347:1:exon

CCE_RS24810
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 43989
locus tag: CCE_RS24810
old locus tag: cce_5270
inference: COORDINATES: similar to AA sequence:RefSeq:WP_007311753.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: Hsp20/alpha crystallin family protein
translation: MALVRYNPWQEMNSLQHQLNRLLDEALTPTNWEDFGNFSKIPAAELTETDDALHLKLEVPGMSAKDLDIQVMVDRVAIAGERKSETNTSENGKTRSEFRYGKFQRVIPLPVRIENTNVSADYKDGILHLNLPKSNEEKNKVVKISIPEAEATA
SIO_010081: CCE_RS24810
subclass of: SO_0000673
so part of: CCE_RS24810
location: 14886..15347
location: region:14886-15347:1
so has part: feature:14886-15347:1:exon

WP_009547895.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:14886-15347:1:exon

CCE_RS24815
type: Gene
subclass of: SO_0000704
RO_0002162: 43989
locus tag: CCE_RS24815
old locus tag: cce_5271
so part of: sequence
location: complement(15601..16482)
location: region:15601-16482:-1
so has part: feature:15601-16482:-1:exon
subclass of: SO_0000010

position:15601:-1
position: 15601
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:16482:-1
position: 16482
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:15601-16482:-1:exon

CCE_RS24815
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 43989
locus tag: CCE_RS24815
old locus tag: cce_5271
inference: COORDINATES: similar to AA sequence:RefSeq:WP_009547896.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MSETNPNQTWITSKSIAIAARIPHNLYHQIEAYGMTHFAKGDGKYDKTATIIDLITKGLGFDSVSQSVQQSVNQVDVKQLVQQTVTQELEKTVYQNDIQNVKQELLKSVKQFVQQSVNQSPESLEEAISKHPTIQSMKTHIDSLDHYLDGLTKAIQELKELKTDNQSIEPVIDNTVNRDDSLEDTSKMEDEDTPLSEVVEANNLPHEETEKDSSLSHDEEVKKTISKVRKLTVTQLQQIMKQFNSLKGKTVFTSRDYSQSRKRRKTDLIIDVLTREKENQVLMIQAIQEIVNS
SIO_010081: CCE_RS24815
subclass of: SO_0000673
so part of: CCE_RS24815
location: complement(15601..16482)
location: region:15601-16482:-1
so has part: feature:15601-16482:-1:exon

WP_009547896.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:15601-16482:-1:exon

CCE_RS24820
type: Gene
subclass of: SO_0000704
RO_0002162: 43989
locus tag: CCE_RS24820
old locus tag: cce_5272
so part of: sequence
location: complement(16634..17179)
location: region:16634-17179:-1
so has part: feature:16634-17179:-1:exon
subclass of: SO_0000010

position:16634:-1
position: 16634
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:17179:-1
position: 17179
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:16634-17179:-1:exon

CCE_RS24820
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 43989
locus tag: CCE_RS24820
old locus tag: cce_5272
inference: COORDINATES: similar to AA sequence:RefSeq:WP_009547897.1
GO function: GO:0003677 - DNA binding [Evidence IEA]; GO:0003700 - DNA-binding transcription factor activity [Evidence IEA]
GO process: GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: TetR/AcrR family transcriptional regulator
translation: MSKEQVLPQLVSVFQHYGYEGATLARLSDTTGLKKASLYHYFQGGKEQMASAVLEYVADWFDKNVFTPLQSSQPPRERIQEMSQGLEEFYHSGEVPCLLSVMSIGEANNLFHQQLETSLKHWLDLLTKVVQETGVTADTAKQRAEDALMMVQGALVLVRVTNNTQPFKRAISRLPKILLDD
SIO_010081: CCE_RS24820
subclass of: SO_0000673
so part of: CCE_RS24820
location: complement(16634..17179)
location: region:16634-17179:-1
so has part: feature:16634-17179:-1:exon

WP_009547897.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:16634-17179:-1:exon

CCE_RS24825
type: Gene
subclass of: SO_0000704
RO_0002162: 43989
locus tag: CCE_RS24825
old locus tag: cce_5273
so part of: sequence
location: 17414..18028
location: region:17414-18028:1
so has part: feature:17414-18028:1:exon
subclass of: SO_0000010

position:17414:1
position: 17414
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:18028:1
position: 18028
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:17414-18028:1:exon

CCE_RS24825
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 43989
locus tag: CCE_RS24825
old locus tag: cce_5273
inference: COORDINATES: similar to AA sequence:RefSeq:WP_009547898.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: pyridoxamine 5'-phosphate oxidase family protein
translation: MAKQFTNIAFTEGVKQAQTDYGSREIYQKFEQRGISEDVLSAREIEFIGARDSFYMGTVNSNNYPYIQFRGGPVGFLKVLHEKTLGFVDFVGNLQYLSVGNLRENDRVFLFLMDYAHRRRLKIWGRAQVIDDNPELLEALSDPNYQAQKARVFLIKVEAFDWNCPQHIPIRYSEAEVAQMTEPFLARIQELEKQVAQLQTSHQS
SIO_010081: CCE_RS24825
subclass of: SO_0000673
so part of: CCE_RS24825
location: 17414..18028
location: region:17414-18028:1
so has part: feature:17414-18028:1:exon

WP_009547898.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:17414-18028:1:exon

CCE_RS24830
type: Gene
subclass of: SO_0000704
RO_0002162: 43989
locus tag: CCE_RS24830
old locus tag: cce_5274
so part of: sequence
location: 18101..18979
location: region:18101-18979:1
so has part: feature:18101-18979:1:exon
subclass of: SO_0000010

position:18101:1
position: 18101
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:18979:1
position: 18979
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:18101-18979:1:exon

CCE_RS24830
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 43989
locus tag: CCE_RS24830
old locus tag: cce_5274
inference: COORDINATES: similar to AA sequence:RefSeq:WP_009547899.1
GO function: GO:0016787 - hydrolase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: alpha/beta hydrolase
translation: MTNFNTTMHKTIDIDGLNIFYREAGNPNAPTLLLLHGFPTSSHMFRNLIPILADEFHLIAPDYPGFGASSMPRVDEFEYSFDKLAEILEKFTIRLNLQQYFLYLMDYGAPVGYRLATKYPEKVLGLIVQNGNAYEEGLRDFWQPLKAYWKDKTNENAQVLADNILTLEATKWQYTNGVRNVEAIAPDNWFHDQYLLDRPGNQEIQLELFYSYGTNPPLYPQWQEYFRSIQPPTLIVWGKGDYIFPEEGAHPYKRDLNNLEFHILGTGHFALEEDLEMIADYIRNFVRSNSSN
SIO_010081: CCE_RS24830
subclass of: SO_0000673
so part of: CCE_RS24830
location: 18101..18979
location: region:18101-18979:1
so has part: feature:18101-18979:1:exon

WP_009547899.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:18101-18979:1:exon

CCE_RS24835
type: Gene
subclass of: SO_0000704
RO_0002162: 43989
locus tag: CCE_RS24835
old locus tag: cce_5275
so part of: sequence
location: 19210..19785
location: region:19210-19785:1
so has part: feature:19210-19785:1:exon
subclass of: SO_0000010

position:19210:1
position: 19210
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:19785:1
position: 19785
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:19210-19785:1:exon

CCE_RS24835
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 43989
locus tag: CCE_RS24835
old locus tag: cce_5275
inference: COORDINATES: similar to AA sequence:RefSeq:WP_009547900.1
GO function: GO:0005524 - ATP binding [Evidence IEA]; GO:0016301 - kinase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: zeta toxin family protein
translation: MPNVYVIGGANGSGKTTVARILLPNFLDVFEYVNADEIAAGLSPFNPESVAMQAGRLMLDRLDTLVQERADFAFETTLAARNFARFLRKCKAHGYTINLIYFWLQTPELAIERVIRRVESGGHNIPLEVIRRRYERGQRNLTQLYLPLCDRWIVYDNSRNNPQLIAECPLNKPAIIYQPFIWQQITKESNG
SIO_010081: CCE_RS24835
subclass of: SO_0000673
so part of: CCE_RS24835
location: 19210..19785
location: region:19210-19785:1
so has part: feature:19210-19785:1:exon

WP_009547900.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:19210-19785:1:exon

CCE_RS24840
type: Gene
subclass of: SO_0000704
RO_0002162: 43989
locus tag: CCE_RS24840
old locus tag: cce_5276
so part of: sequence
location: 19778..19978
location: region:19778-19978:1
so has part: feature:19778-19978:1:exon
subclass of: SO_0000010

position:19778:1
position: 19778
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:19978:1
position: 19978
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:19778-19978:1:exon

CCE_RS24840
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 43989
locus tag: CCE_RS24840
old locus tag: cce_5276
inference: COORDINATES: similar to AA sequence:RefSeq:WP_009547901.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MAKKNPDKLSDQIDAGVKTAISKAIERHRRLGESISILKDGKVVTLNADQIPPLDEPKNNDLLDNT
SIO_010081: CCE_RS24840
subclass of: SO_0000673
so part of: CCE_RS24840
location: 19778..19978
location: region:19778-19978:1
so has part: feature:19778-19978:1:exon

WP_009547901.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:19778-19978:1:exon

CCE_RS24845
type: Gene
subclass of: SO_0000704
RO_0002162: 43989
locus tag: CCE_RS24845
old locus tag: cce_5277
pseudo: true
so part of: sequence
location: complement(19996..20422)
location: region:19996-20422:-1
so has part: feature:19996-20422:-1:exon
subclass of: SO_0000010

position:19996:-1
position: 19996
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:20422:-1
position: 20422
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:19996-20422:-1:exon

CCE_RS24845
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 43989
locus tag: CCE_RS24845
old locus tag: cce_5277
inference: COORDINATES: similar to AA sequence:RefSeq:WP_008278188.1
note: frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: PIN domain-containing protein
SIO_010081: CCE_RS24845
subclass of: SO_0000673
so part of: CCE_RS24845
location: complement(19996..20422)
location: region:19996-20422:-1
so has part: feature:19996-20422:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:19996-20422:-1:exon

CCE_RS24850
type: Gene
subclass of: SO_0000704
RO_0002162: 43989
locus tag: CCE_RS24850
old locus tag: cce_5278
so part of: sequence
location: complement(20422..20685)
location: region:20422-20685:-1
so has part: feature:20422-20685:-1:exon
subclass of: SO_0000010

position:20685:-1
position: 20685
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:20422-20685:-1:exon

CCE_RS24850
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 43989
locus tag: CCE_RS24850
old locus tag: cce_5278
inference: COORDINATES: similar to AA sequence:RefSeq:WP_008278187.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MLSINLDKETESYLAEIISKENITSEELLKQLIYQHWQTLQPRQTLVERRGGHPKHLLQDAQADLSLRENRKNIVASHIKNRHQKSN
SIO_010081: CCE_RS24850
subclass of: SO_0000673
so part of: CCE_RS24850
location: complement(20422..20685)
location: region:20422-20685:-1
so has part: feature:20422-20685:-1:exon

WP_008278187.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:20422-20685:-1:exon

CCE_RS24855
type: Gene
subclass of: SO_0000704
RO_0002162: 43989
locus tag: CCE_RS24855
old locus tag: cce_5279
so part of: sequence
location: 20843..21931
location: region:20843-21931:1
so has part: feature:20843-21931:1:exon
subclass of: SO_0000010

position:20843:1
position: 20843
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:21931:1
position: 21931
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:20843-21931:1:exon

CCE_RS24855
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 43989
locus tag: CCE_RS24855
old locus tag: cce_5279
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012593109.1
GO function: GO:0003677 - DNA binding [Evidence IEA]
GO process: GO:0015074 - DNA integration [Evidence IEA]; GO:0006310 - DNA recombination [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: tyrosine-type recombinase/integrase
translation: MLTHSTPSDLTPTDLLDNFAAFVRLDTADGNAADDTVKTYACTVKQFFSWCHVQRLHPLDATRDDIKLYRRWLVEIQDYKCATIALKLTVVRRFYAGAVERGLILANPALGIKPPRENIDPAERINYLEEAEVTGLLASLPTENTIGGLRDRFLVAVMVLEGCRTVEMHRASIGDIVKRGSDIGIRVSGKRSRRIVPLTPDLAKLLNKYLQARKRSGEALNGDTPLFIALDKRTYGGRLSRRSIQRVIDKYLRAAGLKEQPTKHKSKKRASNKSHQPSNGEKQNSSQSASAKSHKFQQPQRQLSAHSLRHTAGTLAIRAGSDLRQVQDLLGHADPRTTALYAHVADRWRNNPALKLGVKVPL
SIO_010081: CCE_RS24855
subclass of: SO_0000673
so part of: CCE_RS24855
location: 20843..21931
location: region:20843-21931:1
so has part: feature:20843-21931:1:exon

WP_009547903.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:20843-21931:1:exon

CCE_RS24860
type: Gene
subclass of: SO_0000704
RO_0002162: 43989
locus tag: CCE_RS24860
old locus tag: cce_5280
so part of: sequence
location: 22275..31856
location: region:22275-31856:1
so has part: feature:22275-31856:1:exon
subclass of: SO_0000010

position:22275:1
position: 22275
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:22275-31856:1:exon

CCE_RS24860
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 43989
locus tag: CCE_RS24860
old locus tag: cce_5280
inference: COORDINATES: protein motif:HMM:NF015140.2
GO component: GO:0016020 - membrane [Evidence IEA]
GO process: GO:0007154 - cell communication [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: Calx-beta domain-containing protein
translation: MALRQWDGDEGNGLWSFARNWDNDTPLADNDDIQIGAGFGTTIFNGQINGQNTLTIGTLTSQSALEVSAGTLTATNTFDVDDNLTISNGTLELNGTSTVNTFTQTGGTLQGSGVLTISGNAEWDGGNQRGTGITEVDGTLTFGGVGQKILGGSGESRTLEINNGAIWNTTSSLFLQGDSIINNNTGSTFDIQEDSTGFIGIFNSIGTNNTFNNAGTLVKSAGDDRFIIDIVFNNTGTVQATNGILDLGGGGDHSGDFEGTATLEFGGGTHNLNSGSSVTASDVDITGGTVNVNTGATYNTNRTDVSFGTWEIANAATIGTGSQSGGTITGAGNLQVTGDFDWNGGNQNGTGTTEVDGTLTFGGTGQKILGAFGESRTLDINNGAIWETTGNLLLQGGSIINNNVGSTFNIQEDSTGFIGILNGGAGGGTFNNAGTLVKSAGDDRFAIDIVFNNTGTVQATNGILDLGGGGDHSGDFEGTATLEFGGGTHNLNSGSSVTASDVDITGGTVNVNTGATYNTNRTDVSFGTWEIANAATIGTGSQSGGTITGAGNLQVTGDFDWNGGNQNGTGTTEVDGTLTFGGTGQKILGAFGESRTLDINNGAIWETTGNLLLQGGSIINNNVGSTFNIQEDSTGFIGILNGGAGGGTFNNAGTLVKSAGDDRFAIDIVFNNTGTVQATNGILDLGGGGDHSGDFEGTATLEFGGGTHNLNSGSSVTASDVDITGGTVNVNTGATYNTNRTDVSFGTWEIANAATIGTGSQSGGTITGAGNLQVTGDFDWNGGNQNGTGTTEVDGTLTFGGTGQKILGAFGESRTLDINNGAIWETTGNLLLQGGSIINNNVGSTFNIQEDSTGFIGILNGGAGGGTFNNAGTLVKSAGDDRFAIDIVFNNTGTVQATNGILDLGGGGDHSGDFEGTATLEFGGGTHNLSSNTTVSVPNVIFSAGTTNLAGDYVLPSGGTTTVSGGTANFTGTITGNSIGDVTLSFGTLNLSTGSAVTATSLVQTGGTLTGSDDLTVTGDFDWNGGNQNGTGTTEVDGTLTFGGTGQKILGAFGESRTLDINNGAIWETTGNLLLQGGSIINNNVGSTFNIQEDSTGFIGILNGGAGGGTFNNAGTLVKSAGDDRFAIDIVFNNTGTVQATNGILDLGGGGDHSGDFEGTATLEFGGGTHNLSSNTTVSVPNVIFSAGTTNLAGDYVLPSGGTTTVSGGTANFTGTITGNSIGDVTLSFGTLNLSTGSAVTATSLVQTGGTLTGSDDLTVTGDFDWNGGNQNGTGTTEVDGTLTFGGTGQKILGAFGESRTLDINNGAIWETTGNLLLQGGSIINNNVGSTFNIQEDSTGFIGILNGGAGGGTFNNAGTLVKSAGDDNFTINIDFNNTGTVSANNGILTFSDNYTQSAGDTRLDGGSIVVSSNPLDINAGNVSGFGSIDGDIDNDAGRITPGLSVGDIAMLNITGDYSETDFSNIDIEIGGLTNFDILDIDGTATLDGTVNVSLVNGFTPTLGQTFEIITFDSAPDIATNLSFSGLDIGGGLAFAPVFNTNDLSLVVVETAALSVSDVIISEGDNGTTNATFNVTLNGETDAFDVDFATVDSTATVADGDYIANSGTLSFDGTDGQTRTVTVQVNGDNKVELNETFDLVLSNLQGNGTLPVLVSGTGTINNDDSANISIDNVTQSEGNNGTTPFTFTVTLNNEVDTGLSVDFATANGSATVANNDYQATNGTLNFTGNAGETQTITVDVVGDTTVEPDETFVVNLNNLQANGRNIILSDSQGIGTIENDDGANLSITNVNLVEGDNGTQQFVFSVTLSNTISGGATVDFTTADNTATTTDNDYTATSGTLTFSGNAGEVETITVDVIGDTEVELNETFLVNLSNASSGVTIADGQGTGTIVNDDAASLSISDVTLSEGNNGTQLYTFTVTLDEAVDTGFTVDYATANNTASIGDGDYTAVNGTLSFDGNAGETQTITVEVNGDNKVELDETFFVNLSNLQNSGRNVVITD…
SIO_010081: CCE_RS24860
subclass of: SO_0000673
so part of: CCE_RS24860
location: 22275..31856
location: region:22275-31856:1
so has part: feature:22275-31856:1:exon

WP_012358621.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:22275-31856:1:exon