Pseudoalteromonas rubra strain DSM 6842 chromosome II, whole genome shotgun sequence.
Bacteria; Pseudomonadota; Gammaproteobacteria; Alteromonadales; Pseudoalteromonadaceae; Pseudoalteromonas.
Genome sequence of the cycloprodigiosin-producing bacterial strain Pseudoalteromonas rubra ATCC 29570(T)
Genome sequence of Pseudoalteromonas rubra
Submitted (12-JUN-2015) State Key Laboratory of Microbial Technology, Shandong University, 27 Shanda Nanlu, Jinan, Shandong 250100, P. R. China
Submitted (19-NOV-2011) Shandong University, No. 27 Shandanan Road, Jinan 250100, China
REFSEQ INFORMATION: The reference sequence is identical to\nAHCD03000044.1.\nThe annotation was added by the NCBI Prokaryotic Genome Annotation\nPipeline (PGAP). Information about PGAP can be found here:\nhttps://www.ncbi.nlm.nih.gov/genome/annotation_prok/\n\n##Genome-Assembly-Data-START##\nAssembly Method :: SOAPdenovo v. 1.05\nGenome Representation :: Full\nExpected Final Version :: No\nGenome Coverage :: 497.0x\nSequencing Technology :: Illumina HiSeq\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI RefSeq\nAnnotation Date :: 04/07/2023 04:25:49\nAnnotation Pipeline :: NCBI Prokaryotic Genome\n Annotation Pipeline (PGAP)\nAnnotation Method :: Best-placed reference protein\n set; GeneMarkS-2+\nAnnotation Software revision :: 6.5\nFeatures Annotated :: Gene; CDS; rRNA; tRNA; ncRNA\nGenes (total) :: 5,274\nCDSs (total) :: 5,031\nGenes (coding) :: 4,958\nCDSs (with protein) :: 4,958\nGenes (RNA) :: 243\nrRNAs :: 3, 3, 5 (5S, 16S, 23S)\ncomplete rRNAs :: 3, 2, 1 (5S, 16S, 23S)\npartial rRNAs :: 1, 4 (16S, 23S)\ntRNAs :: 228\nncRNAs :: 4\nPseudo Genes (total) :: 73\nCDSs (without protein) :: 73\nPseudo Genes (ambiguous residues) :: 0 of 73\nPseudo Genes (frameshifted) :: 14 of 73\nPseudo Genes (incomplete) :: 58 of 73\nPseudo Genes (internal stop) :: 11 of 73\nPseudo Genes (multiple problems) :: 9 of 73\nCRISPR Arrays :: 8\n##Genome-Annotation-Data-END##\nCOMPLETENESS: full length.
COORDINATES: similar to AA sequence:RefSeq:WP_010376208.1
Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_008169458.1
COORDINATES: similar to AA sequence:RefSeq:WP_017216878.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0016887 - ATP hydrolysis activity [Evidence IEA]; GO:0004386 - helicase activity [Evidence IEA]; GO:0003676 - nucleic acid binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_010605534.1
COORDINATES: similar to AA sequence:RefSeq:WP_010605535.1
GO:0000160 - phosphorelay signal transduction system [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_010376201.1
COORDINATES: ab initio prediction:GeneMarkS-2+
Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
COORDINATES: similar to AA sequence:RefSeq:WP_010365312.1
COORDINATES: protein motif:HMM:NF014567.2
COORDINATES: similar to AA sequence:RefSeq:WP_002959200.1
GO:0004451 - isocitrate lyase activity [Evidence IEA]
GO:0019752 - carboxylic acid metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_010365306.1
GO:0004474 - malate synthase activity [Evidence IEA]
GO:0006097 - glyoxylate cycle [Evidence IEA]
COORDINATES: protein motif:HMM:NF021364.2
COORDINATES: similar to AA sequence:RefSeq:WP_010371058.1
GO:0005515 - protein binding [Evidence IEA]
COORDINATES: protein motif:HMM:NF012791.2
COORDINATES: similar to AA sequence:RefSeq:WP_011575082.1
GO:0006812 - monoatomic cation transport [Evidence IEA]; GO:0055085 - transmembrane transport [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_010381388.1
frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: protein motif:HMM:NF024767.2
COORDINATES: similar to AA sequence:RefSeq:WP_007585496.1
COORDINATES: similar to AA sequence:RefSeq:WP_010364001.1
COORDINATES: protein motif:HMM:NF012707.2
transporter substrate-binding domain-containing protein
COORDINATES: protein motif:HMM:NF012376.2
GO:0016787 - hydrolase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_016706489.1
COORDINATES: similar to AA sequence:RefSeq:WP_010376069.1
COORDINATES: similar to AA sequence:RefSeq:WP_016706492.1
exonuclease SbcCD subunit D C-terminal domain-containing protein
COORDINATES: protein motif:HMM:NF024867.2
COORDINATES: similar to AA sequence:RefSeq:WP_010364365.1
GO:0008168 - methyltransferase activity [Evidence IEA]; GO:1904047 - S-adenosyl-L-methionine binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_010364368.1
COORDINATES: similar to AA sequence:RefSeq:WP_010376054.1
COORDINATES: similar to AA sequence:RefSeq:WP_014979603.1
COORDINATES: similar to AA sequence:RefSeq:WP_011864733.1
GO:0004803 - transposase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF020243.2
SDR family NAD(P)-dependent oxidoreductase
COORDINATES: protein motif:HMM:NF018184.2
COORDINATES: protein motif:HMM:NF022072.2
COORDINATES: protein motif:HMM:NF013559.2
GO:0004222 - metalloendopeptidase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011626624.1
COORDINATES: similar to AA sequence:RefSeq:WP_010559466.1
GO:0015267 - channel activity [Evidence IEA]
GO:0015891 - siderophore transport [Evidence IEA]; GO:0055085 - transmembrane transport [Evidence IEA]
COORDINATES: protein motif:HMM:NF014081.2
COORDINATES: similar to AA sequence:RefSeq:WP_010558544.1
GO:0008080 - N-acetyltransferase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011621542.1
COORDINATES: similar to AA sequence:RefSeq:WP_005495158.1
COORDINATES: similar to AA sequence:RefSeq:WP_009838920.1
GO:0016853 - isomerase activity [Evidence IEA]
GO:0009058 - biosynthetic process [Evidence IEA]
PhzF family phenazine biosynthesis protein
COORDINATES: similar to AA sequence:RefSeq:WP_014107333.1
GO:0022857 - transmembrane transporter activity [Evidence IEA]
GO:0055085 - transmembrane transport [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_010367596.1
GO:0005215 - transporter activity [Evidence IEA]
efflux RND transporter periplasmic adaptor subunit
COORDINATES: similar to AA sequence:RefSeq:WP_006087089.1
COORDINATES: protein motif:HMM:NF023232.2
COORDINATES: similar to AA sequence:RefSeq:WP_010364380.1
PepSY-associated TM helix domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_010364385.1
COORDINATES: similar to AA sequence:RefSeq:WP_010364387.1
COORDINATES: protein motif:HMM:NF015735.2
incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: protein motif:HMM:NF024950.2
COORDINATES: protein motif:HMM:NF021584.2
COORDINATES: similar to AA sequence:RefSeq:WP_010364389.1
COORDINATES: protein motif:HMM:NF015431.2
GO:0003677 - DNA binding [Evidence IEA]; GO:0003700 - DNA-binding transcription factor activity [Evidence IEA]
GO:0003700 - DNA-binding transcription factor activity [Evidence IEA]
GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
COORDINATES: protein motif:HMM:NF014573.2
COORDINATES: similar to AA sequence:RefSeq:WP_006033602.1
GO:0042586 - peptide deformylase activity [Evidence IEA]
GO:0036211 - protein modification process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_010367813.1
GO:0003700 - DNA-binding transcription factor activity [Evidence IEA]; GO:0043565 - sequence-specific DNA binding [Evidence IEA]
helix-turn-helix domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_010367812.1
COORDINATES: similar to AA sequence:RefSeq:WP_014949001.1
COORDINATES: protein motif:HMM:NF014667.2
COORDINATES: protein motif:HMM:NF019310.2
GO:0001216 - DNA-binding transcription activator activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013753539.1
GO:0003824 - catalytic activity [Evidence IEA]
isocitrate lyase/phosphoenolpyruvate mutase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_019026884.1
LysR substrate-binding domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_012143930.1
COORDINATES: protein motif:HMM:NF019604.2
NAD(P)-binding domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_012276103.1
metalloregulator ArsR/SmtB family transcription factor
COORDINATES: protein motif:HMM:NF036531.2
alpha-2-macroglobulin domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_014976376.1
COORDINATES: similar to AA sequence:RefSeq:WP_016955251.1
COORDINATES: similar to AA sequence:RefSeq:WP_010387847.1
COORDINATES: similar to AA sequence:RefSeq:WP_008466566.1
COORDINATES: protein motif:HMM:NF024039.2
COORDINATES: similar to AA sequence:RefSeq:WP_010364288.1
GO:0016491 - oxidoreductase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF024118.2
COORDINATES: similar to AA sequence:RefSeq:WP_010375690.1
COORDINATES: protein motif:HMM:NF012792.2
incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_010559096.1
COORDINATES: similar to AA sequence:RefSeq:WP_010364402.1
COORDINATES: similar to AA sequence:RefSeq:WP_017216954.1
GO:0004222 - metalloendopeptidase activity [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_001020572.1
GO:0016829 - lyase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_017216922.1
COORDINATES: similar to AA sequence:RefSeq:WP_010376105.1
COORDINATES: protein motif:HMM:NF024116.2
COORDINATES: protein motif:HMM:NF016777.2
COORDINATES: similar to AA sequence:RefSeq:WP_017217007.1
COORDINATES: similar to AA sequence:RefSeq:WP_008301674.1
GO:0019172 - glyoxalase III activity [Evidence IEA]
type 1 glutamine amidotransferase domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_017217877.1
GO:0006749 - glutathione metabolic process [Evidence IEA]
glutathione S-transferase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_016400617.1
COORDINATES: similar to AA sequence:RefSeq:WP_016899634.1
COORDINATES: similar to AA sequence:RefSeq:WP_010367279.1
COORDINATES: protein motif:HMM:NF021435.2
COORDINATES: protein motif:HMM:NF004231.0
GO:0010181 - FMN binding [Evidence IEA]; GO:0004733 - pyridoxamine-phosphate oxidase activity [Evidence IEA]
GO:0008615 - pyridoxine biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_010376096.1
GO:0008152 - metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011329702.1
YebC/PmpR family DNA-binding transcriptional regulator
COORDINATES: protein motif:HMM:NF014396.2
GO:0016158 - 3-phytase activity [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00254.1
COORDINATES: similar to AA sequence:RefSeq:WP_008169633.1
GO:0015288 - porin activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_007580781.1
COORDINATES: similar to AA sequence:RefSeq:WP_010553012.1
GO:0008812 - choline dehydrogenase activity [Evidence IEA]
GO:0019285 - glycine betaine biosynthetic process from choline [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_015067700.1
GO:0008802 - betaine-aldehyde dehydrogenase activity [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013753471.1
COORDINATES: protein motif:HMM:NF012801.2
GO:0009279 - cell outer membrane [Evidence IEA]; GO:0016020 - membrane [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_010371803.1
COORDINATES: protein motif:HMM:NF014816.2
COORDINATES: similar to AA sequence:RefSeq:WP_014976647.1
COORDINATES: similar to AA sequence:RefSeq:WP_017218574.1
COORDINATES: similar to AA sequence:RefSeq:WP_010364264.1
COORDINATES: similar to AA sequence:RefSeq:WP_010364262.1
GO:0016758 - hexosyltransferase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_010364260.1
GO:0051539 - 4 iron, 4 sulfur cluster binding [Evidence IEA]; GO:0003824 - catalytic activity [Evidence IEA]; GO:1904047 - S-adenosyl-L-methionine binding [Evidence IEA]
COORDINATES: protein motif:HMM:NF025025.2
COORDINATES: protein motif:HMM:NF012869.2
ATP-binding cassette domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_010364254.1
COORDINATES: protein motif:HMM:NF020374.2
DUF1796 family putative cysteine peptidase
COORDINATES: protein motif:HMM:NF012711.2
amino acid adenylation domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_012089361.1
COORDINATES: similar to AA sequence:RefSeq:WP_017218197.1
COORDINATES: similar to AA sequence:RefSeq:WP_010375323.1
COORDINATES: protein motif:HMM:NF012958.2
COORDINATES: protein motif:HMM:TIGR00229.1
PAS domain-containing hybrid sensor histidine kinase/response regulator
COORDINATES: protein motif:HMM:NF037660.2
COORDINATES: similar to AA sequence:RefSeq:WP_012324034.1
COORDINATES: similar to AA sequence:RefSeq:WP_019616582.1
COORDINATES: protein motif:HMM:NF013933.2
COORDINATES: protein motif:HMM:NF024092.2
nuclear transport factor 2 family protein
COORDINATES: similar to AA sequence:RefSeq:WP_011919942.1
COORDINATES: similar to AA sequence:RefSeq:WP_010367799.1
COORDINATES: protein motif:HMM:NF013646.2
GO:0050660 - flavin adenine dinucleotide binding [Evidence IEA]; GO:0016491 - oxidoreductase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF012428.2
GO:0030170 - pyridoxal phosphate binding [Evidence IEA]; GO:0008483 - transaminase activity [Evidence IEA]
aminotransferase class III-fold pyridoxal phosphate-dependent enzyme
COORDINATES: protein motif:HMM:NF021445.2
COORDINATES: protein motif:HMM:NF013434.2
COORDINATES: protein motif:HMM:NF012957.2
COORDINATES: protein motif:HMM:NF012334.2
COORDINATES: protein motif:HMM:NF012402.2
GO:0009055 - electron transfer activity [Evidence IEA]; GO:0051536 - iron-sulfur cluster binding [Evidence IEA]
2Fe-2S iron-sulfur cluster-binding protein
COORDINATES: protein motif:HMM:NF012699.2
COORDINATES: protein motif:HMM:NF012759.2
COORDINATES: similar to AA sequence:RefSeq:WP_005491893.1
COORDINATES: protein motif:HMM:NF024852.2
COORDINATES: protein motif:HMM:NF013722.2
MaoC/PaaZ C-terminal domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_010560872.1
TetR/AcrR family transcriptional regulator
sensor domain-containing diguanylate cyclase
COORDINATES: protein motif:HMM:NF025069.2
COORDINATES: protein motif:HMM:NF016163.2
COORDINATES: protein motif:HMM:NF025054.2
COORDINATES: similar to AA sequence:RefSeq:WP_010556519.1
COORDINATES: similar to AA sequence:RefSeq:WP_011041990.1
sulfite exporter TauE/SafE family protein
COORDINATES: similar to AA sequence:RefSeq:WP_005443333.1
COORDINATES: similar to AA sequence:RefSeq:WP_019825919.1
GO:0003871 - 5-methyltetrahydropteroyltriglutamate-homocysteine S-methyltransferase activity [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA]
GO:0009086 - methionine biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_010558271.1
COORDINATES: similar to AA sequence:RefSeq:WP_010373049.1
COORDINATES: protein motif:HMM:NF012273.2
COORDINATES: similar to AA sequence:RefSeq:WP_010367354.1
GO:0004386 - helicase activity [Evidence IEA]
GO:0006310 - DNA recombination [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_018983385.1
COORDINATES: protein motif:HMM:NF025838.2
COORDINATES: protein motif:HMM:NF025001.2
COORDINATES: protein motif:HMM:NF024685.2
COORDINATES: similar to AA sequence:RefSeq:WP_019026767.1
GO:0110001 - toxin-antitoxin complex [Evidence IEA]
type II toxin-antitoxin system Phd/YefM family antitoxin
COORDINATES: similar to AA sequence:RefSeq:WP_010363486.1
COORDINATES: similar to AA sequence:RefSeq:WP_010363484.1
COORDINATES: similar to AA sequence:RefSeq:WP_010363482.1
GO:0030246 - carbohydrate binding [Evidence IEA]; GO:0004553 - hydrolase activity, hydrolyzing O-glycosyl compounds [Evidence IEA]
GO:0005975 - carbohydrate metabolic process [Evidence IEA]
cellulose binding domain-containing protein
COORDINATES: nucleotide motif:Rfam:14.4:RF01051
cyclic di-GMP riboswitch class I; Derived by automated computational analysis using gene prediction method: cmsearch.
COORDINATES: similar to AA sequence:RefSeq:WP_014611072.1
COORDINATES: protein motif:HMM:NF025489.2
COORDINATES: similar to AA sequence:RefSeq:WP_008487555.1
COORDINATES: similar to AA sequence:RefSeq:WP_010375345.1
COORDINATES: similar to AA sequence:RefSeq:WP_012197013.1
COORDINATES: similar to AA sequence:RefSeq:WP_012324100.1
COORDINATES: similar to AA sequence:RefSeq:WP_011041623.1
HlyD family efflux transporter periplasmic adaptor subunit
COORDINATES: similar to AA sequence:RefSeq:WP_019026572.1
GO:0140359 - ABC-type transporter activity [Evidence IEA]; GO:0005524 - ATP binding [Evidence IEA]; GO:0016887 - ATP hydrolysis activity [Evidence IEA]; GO:0042626 - ATPase-coupled transmembrane transporter activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011041625.1
COORDINATES: similar to AA sequence:RefSeq:WP_009836865.1
sigma-54 dependent transcriptional regulator
COORDINATES: similar to AA sequence:RefSeq:WP_008134410.1
COORDINATES: similar to AA sequence:RefSeq:WP_010367243.1
GO:0004252 - serine-type endopeptidase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_008607785.1
GO:0009055 - electron transfer activity [Evidence IEA]; GO:0020037 - heme binding [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]
GO:0022904 - respiratory electron transport chain [Evidence IEA]
COORDINATES: protein motif:HMM:NF012772.2
COORDINATES: protein motif:HMM:NF024845.2
COORDINATES: similar to AA sequence:RefSeq:WP_006955576.1
COORDINATES: similar to AA sequence:RefSeq:WP_010367959.1
GO:0004364 - glutathione transferase activity [Evidence IEA]; GO:0016491 - oxidoreductase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_002957978.1
COORDINATES: similar to AA sequence:RefSeq:WP_009837106.1
COORDINATES: similar to AA sequence:RefSeq:WP_009836320.1
COORDINATES: similar to AA sequence:RefSeq:WP_009836319.1
COORDINATES: similar to AA sequence:RefSeq:WP_009836318.1
COORDINATES: similar to AA sequence:RefSeq:WP_009836317.1
COORDINATES: similar to AA sequence:RefSeq:WP_009836316.1
GO:0140359 - ABC-type transporter activity [Evidence IEA]; GO:0005524 - ATP binding [Evidence IEA]; GO:1904680 - peptide transmembrane transporter activity [Evidence IEA]
GO:0015833 - peptide transport [Evidence IEA]
COORDINATES: protein motif:HMM:NF003417.0
COORDINATES: similar to AA sequence:RefSeq:WP_009836313.1
COORDINATES: similar to AA sequence:RefSeq:WP_009836312.1
COORDINATES: similar to AA sequence:RefSeq:WP_008133625.1
COORDINATES: similar to AA sequence:RefSeq:WP_016710291.1
COORDINATES: similar to AA sequence:RefSeq:WP_010605606.1
COORDINATES: similar to AA sequence:RefSeq:WP_019616998.1
GO:0016655 - oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor [Evidence IEA]
GO:0005886 - plasma membrane [Evidence IEA]
GO:0005525 - GTP binding [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_010603886.1
COORDINATES: similar to AA sequence:RefSeq:WP_010603959.1
COORDINATES: similar to AA sequence:RefSeq:WP_010603958.1
CRISPR-associated helicase/endonuclease Cas3
COORDINATES: similar to AA sequence:RefSeq:WP_010379928.1
GO:0003674 - molecular_function [Evidence IEA]
GO:0043571 - maintenance of CRISPR repeat elements [Evidence IEA]
type I-E CRISPR-associated protein Cse1/CasA
COORDINATES: similar to AA sequence:RefSeq:WP_010603956.1
type I-E CRISPR-associated protein Cas7/Cse4/CasC
COORDINATES: similar to AA sequence:RefSeq:WP_010379930.1
type I-E CRISPR-associated protein Cas5/CasD
COORDINATES: similar to AA sequence:RefSeq:WP_010603954.1
type I-E CRISPR-associated protein Cas6/Cse3/CasE
COORDINATES: similar to AA sequence:RefSeq:WP_010603953.1
GO:0004520 - endodeoxyribonuclease activity [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0003676 - nucleic acid binding [Evidence IEA]
GO:0051607 - defense response to virus [Evidence IEA]; GO:0043571 - maintenance of CRISPR repeat elements [Evidence IEA]
type I-E CRISPR-associated endonuclease Cas1e
COORDINATES: similar to AA sequence:RefSeq:WP_010603952.1
GO:0004521 - endoribonuclease activity [Evidence IEA]
type I-E CRISPR-associated endoribonuclease Cas2e
COORDINATES: similar to AA sequence:RefSeq:WP_017218223.1
COORDINATES: similar to AA sequence:RefSeq:WP_010603877.1
COORDINATES: protein motif:HMM:NF012698.2
GO:0000160 - phosphorelay signal transduction system [Evidence IEA]; GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
winged helix-turn-helix domain-containing protein
COORDINATES: protein motif:HMM:NF015531.2
COORDINATES: similar to AA sequence:RefSeq:WP_017219009.1
COORDINATES: protein motif:HMM:NF012873.2
COORDINATES: protein motif:HMM:NF024753.2
PQQ-binding-like beta-propeller repeat protein
COORDINATES: protein motif:HMM:NF024583.2
COORDINATES: protein motif:HMM:NF013123.2
DPP IV N-terminal domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_019442649.1
COORDINATES: similar to AA sequence:RefSeq:WP_010366108.1
GO:0004553 - hydrolase activity, hydrolyzing O-glycosyl compounds [Evidence IEA]
GO:0071704 - organic substance metabolic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF024809.2
glutathione S-transferase N-terminal domain-containing protein
COORDINATES: protein motif:HMM:NF022443.2
COORDINATES: similar to AA sequence:RefSeq:WP_017444357.1
GO:0008767 - UDP-galactopyranose mutase activity [Evidence IEA]
GO:0009273 - peptidoglycan-based cell wall biogenesis [Evidence IEA]
COORDINATES: protein motif:HMM:NF024972.2
COORDINATES: similar to AA sequence:RefSeq:WP_005493186.1
COORDINATES: similar to AA sequence:RefSeq:WP_010364618.1
COORDINATES: protein motif:HMM:NF024816.2
COORDINATES: similar to AA sequence:RefSeq:WP_017221607.1
COORDINATES: protein motif:HMM:NF013340.2
COORDINATES: similar to AA sequence:RefSeq:WP_009840233.1
COORDINATES: similar to AA sequence:RefSeq:WP_005495801.1
GO:0010181 - FMN binding [Evidence IEA]; GO:0016491 - oxidoreductase activity [Evidence IEA]
Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
COORDINATES: similar to AA sequence:RefSeq:WP_011771114.1
COORDINATES: similar to AA sequence:RefSeq:WP_017216913.1
COORDINATES: protein motif:HMM:NF023125.2
COORDINATES: similar to AA sequence:RefSeq:WP_005491611.1
COORDINATES: similar to AA sequence:RefSeq:WP_010604545.1
COORDINATES: similar to AA sequence:RefSeq:WP_010365797.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0000156 - phosphorelay response regulator activity [Evidence IEA]; GO:0004673 - protein histidine kinase activity [Evidence IEA]
GO:0007165 - signal transduction [Evidence IEA]
HAMP domain-containing sensor histidine kinase
COORDINATES: similar to AA sequence:RefSeq:WP_010606217.1
COORDINATES: similar to AA sequence:RefSeq:WP_138551156.1
COORDINATES: similar to AA sequence:RefSeq:WP_006793508.1
zinc-dependent metalloprotease family protein
COORDINATES: similar to AA sequence:RefSeq:WP_008133188.1
COORDINATES: similar to AA sequence:RefSeq:WP_016899106.1
COORDINATES: similar to AA sequence:RefSeq:WP_010380022.1
COORDINATES: similar to AA sequence:RefSeq:WP_010380024.1
COORDINATES: similar to AA sequence:RefSeq:WP_010380026.1
COORDINATES: similar to AA sequence:RefSeq:WP_010380027.1
COORDINATES: similar to AA sequence:RefSeq:WP_010380029.1
COORDINATES: similar to AA sequence:RefSeq:WP_010380032.1
COORDINATES: similar to AA sequence:RefSeq:WP_010367268.1
COORDINATES: similar to AA sequence:RefSeq:WP_010380010.1
COORDINATES: similar to AA sequence:RefSeq:WP_010367266.1
COORDINATES: similar to AA sequence:RefSeq:WP_010380013.1
COORDINATES: similar to AA sequence:RefSeq:WP_010380016.1
COORDINATES: similar to AA sequence:RefSeq:WP_010380020.1
COORDINATES: similar to AA sequence:RefSeq:WP_010366540.1
COORDINATES: similar to AA sequence:RefSeq:WP_011328551.1
COORDINATES: similar to AA sequence:RefSeq:WP_013464634.1
COORDINATES: protein motif:HMM:NF013100.2
GO:0008658 - penicillin binding [Evidence IEA]
penicillin-binding transpeptidase domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_010367527.1
GO:0043565 - sequence-specific DNA binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_010367525.1
GO:0019867 - outer membrane [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_010367523.1
COORDINATES: similar to AA sequence:RefSeq:WP_010367521.1
COORDINATES: similar to AA sequence:RefSeq:WP_012323205.1
COORDINATES: similar to AA sequence:RefSeq:WP_009836975.1
COORDINATES: similar to AA sequence:RefSeq:WP_005495129.1
COORDINATES: protein motif:HMM:NF013867.2
GO:0008168 - methyltransferase activity [Evidence IEA]; GO:0008983 - protein-glutamate O-methyltransferase activity [Evidence IEA]; GO:0016740 - transferase activity [Evidence IEA]
protein-glutamate O-methyltransferase CheR
COORDINATES: protein motif:HMM:NF012245.2
GO:0098561 - methyl accepting chemotaxis protein complex [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_017220226.1
COORDINATES: similar to AA sequence:RefSeq:WP_010556148.1
COORDINATES: similar to AA sequence:RefSeq:WP_010603941.1
COORDINATES: similar to AA sequence:RefSeq:WP_006793276.1
GO:0003747 - translation release factor activity [Evidence IEA]
GO:0006415 - translational termination [Evidence IEA]
alternative ribosome rescue aminoacyl-tRNA hydrolase ArfB
COORDINATES: similar to AA sequence:RefSeq:WP_010375647.1
COORDINATES: similar to AA sequence:RefSeq:WP_010365294.1
COORDINATES: protein motif:HMM:NF022895.2
COORDINATES: protein motif:HMM:NF018352.2
COORDINATES: protein motif:HMM:NF021355.2
beta-propeller domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_010558315.1
COORDINATES: similar to AA sequence:RefSeq:WP_008139346.1
GO:0017168 - 5-oxoprolinase (ATP-hydrolyzing) activity [Evidence IEA]; GO:0005524 - ATP binding [Evidence IEA]; GO:0016810 - hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_017218725.1
COORDINATES: similar to AA sequence:RefSeq:WP_005490661.1
COORDINATES: similar to AA sequence:RefSeq:WP_010366104.1
COORDINATES: similar to AA sequence:RefSeq:WP_009840769.1
COORDINATES: similar to AA sequence:RefSeq:WP_005490658.1
COORDINATES: protein motif:HMM:NF013736.2
COORDINATES: similar to AA sequence:RefSeq:WP_005490647.1
COORDINATES: similar to AA sequence:RefSeq:WP_000106983.1
GO:0003676 - nucleic acid binding [Evidence IEA]; GO:0003723 - RNA binding [Evidence IEA]; GO:0001072 - transcription antitermination factor activity, RNA binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_010605492.1
COORDINATES: protein motif:HMM:NF014869.2
COORDINATES: similar to AA sequence:RefSeq:WP_010367264.1
COORDINATES: protein motif:HMM:NF040138.1
COORDINATES: protein motif:HMM:NF015692.2
GO:0016799 - hydrolase activity, hydrolyzing N-glycosyl compounds [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]
ADP-ribosylglycohydrolase family protein
COORDINATES: protein motif:HMM:NF008629.1
GO:0004519 - endonuclease activity [Evidence IEA]
cleaves DNA at apurinic or apyrimidinic sites; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_014980219.1
COORDINATES: similar to AA sequence:RefSeq:WP_010603813.1
COORDINATES: similar to AA sequence:RefSeq:WP_010370196.1
GO:0046421 - methylisocitrate lyase activity [Evidence IEA]
GO:0019629 - propionate catabolic process, 2-methylcitrate cycle [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_017217742.1
GO:0050440 - 2-methylcitrate synthase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014980139.1
GO:0047456 - 2-methylisocitrate dehydratase activity [Evidence IEA]
Fe/S-dependent 2-methylisocitrate dehydratase AcnD
COORDINATES: similar to AA sequence:RefSeq:WP_006014711.1
2-methylaconitate cis-trans isomerase PrpF
COORDINATES: similar to AA sequence:RefSeq:WP_017217739.1
COORDINATES: similar to AA sequence:RefSeq:WP_015464746.1
COORDINATES: similar to AA sequence:RefSeq:WP_010603738.1
COORDINATES: similar to AA sequence:RefSeq:WP_017217669.1
COORDINATES: similar to AA sequence:RefSeq:WP_017217668.1
COORDINATES: similar to AA sequence:RefSeq:WP_010365711.1
COORDINATES: similar to AA sequence:RefSeq:WP_008949460.1
GO:0015293 - symporter activity [Evidence IEA]
bile acid:sodium symporter family protein
COORDINATES: similar to AA sequence:RefSeq:WP_010366640.1
COORDINATES: similar to AA sequence:RefSeq:WP_010603727.1
RsmB/NOP family class I SAM-dependent RNA methyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_007650566.1
COORDINATES: protein motif:HMM:NF013357.2
COORDINATES: similar to AA sequence:RefSeq:WP_008110735.1
GO:0005337 - nucleoside transmembrane transporter activity [Evidence IEA]; GO:0015293 - symporter activity [Evidence IEA]
GO:1901642 - nucleoside transmembrane transport [Evidence IEA]
NupC/NupG family nucleoside CNT transporter
COORDINATES: similar to AA sequence:RefSeq:WP_008110733.1
GO:0004849 - uridine kinase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_017217656.1
GO:0000287 - magnesium ion binding [Evidence IEA]; GO:0008973 - phosphopentomutase activity [Evidence IEA]
GO:0043094 - cellular metabolic compound salvage [Evidence IEA]; GO:0009117 - nucleotide metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011329723.1
GO:0004731 - purine-nucleoside phosphorylase activity [Evidence IEA]
GO:0043096 - purine nucleobase salvage [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_010388685.1
GO:0004324 - ferredoxin-NADP+ reductase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_010365732.1
COORDINATES: similar to AA sequence:RefSeq:WP_010369934.1
COORDINATES: similar to AA sequence:RefSeq:WP_010365738.1
COORDINATES: similar to AA sequence:RefSeq:WP_010369923.1
COORDINATES: protein motif:HMM:NF019350.2
GO:0000155 - phosphorelay sensor kinase activity [Evidence IEA]; GO:0046983 - protein dimerization activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012141379.1
COORDINATES: similar to AA sequence:RefSeq:WP_010361791.1
COORDINATES: similar to AA sequence:RefSeq:WP_017217617.1
putative DNA-binding domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_010369803.1
COORDINATES: similar to AA sequence:RefSeq:WP_007375404.1
COORDINATES: similar to AA sequence:RefSeq:WP_009836405.1
COORDINATES: similar to AA sequence:RefSeq:WP_005493493.1
COORDINATES: similar to AA sequence:RefSeq:WP_007376473.1
COORDINATES: similar to AA sequence:RefSeq:WP_010387240.1
COORDINATES: similar to AA sequence:RefSeq:WP_010387241.1
SpvB/TcaC N-terminal domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_010387247.1
COORDINATES: protein motif:HMM:NF015497.2
COORDINATES: protein motif:HMM:NF014724.2
COORDINATES: similar to AA sequence:RefSeq:WP_010361742.1
COORDINATES: protein motif:HMM:NF036537.2
COORDINATES: protein motif:HMM:NF024306.2
COORDINATES: similar to AA sequence:RefSeq:WP_017218747.1
COORDINATES: protein motif:HMM:NF015252.2
GO:0051082 - unfolded protein binding [Evidence IEA]
GO:0006457 - protein folding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011638603.1
COORDINATES: similar to AA sequence:RefSeq:WP_010606559.1
COORDINATES: protein motif:HMM:NF012239.2
GO:0005525 - GTP binding [Evidence IEA]; GO:0003924 - GTPase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012519733.1
GO:0004096 - catalase activity [Evidence IEA]; GO:0004601 - peroxidase activity [Evidence IEA]
GO:0006979 - response to oxidative stress [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_010363069.1
COORDINATES: similar to AA sequence:RefSeq:WP_010367586.1
COORDINATES: protein motif:HMM:NF015927.2
COORDINATES: similar to AA sequence:RefSeq:WP_010604542.1
DUF6058 family natural product biosynthesis protein
COORDINATES: similar to AA sequence:RefSeq:WP_011233777.1
COORDINATES: similar to AA sequence:RefSeq:WP_019440653.1
aromatic amino acid DMT transporter YddG
COORDINATES: similar to AA sequence:RefSeq:WP_017222105.1
COORDINATES: similar to AA sequence:RefSeq:WP_017217688.1
COORDINATES: protein motif:HMM:NF012318.2
COORDINATES: similar to AA sequence:RefSeq:WP_010607473.1
COORDINATES: similar to AA sequence:RefSeq:WP_017217874.1
GO:0015114 - phosphate ion transmembrane transporter activity [Evidence IEA]; GO:0005436 - sodium:phosphate symporter activity [Evidence IEA]
GO:0035435 - phosphate ion transmembrane transport [Evidence IEA]; GO:0044341 - sodium-dependent phosphate transport [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_010365840.1
GO:0045892 - negative regulation of DNA-templated transcription [Evidence IEA]
BlaI/MecI/CopY family transcriptional regulator
COORDINATES: protein motif:HMM:NF017390.2
COORDINATES: protein motif:HMM:NF013700.2
GO:0046872 - metal ion binding [Evidence IEA]
COORDINATES: protein motif:HMM:NF024627.2
right-handed parallel beta-helix repeat-containing protein
endonuclease/exonuclease/phosphatase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_008305667.1
COORDINATES: protein motif:HMM:NF024371.2
COORDINATES: similar to AA sequence:RefSeq:WP_009839010.1
COORDINATES: protein motif:HMM:NF025067.2
COORDINATES: similar to AA sequence:RefSeq:WP_017216415.1
COORDINATES: similar to AA sequence:RefSeq:WP_017216416.1
COORDINATES: similar to AA sequence:RefSeq:WP_008132323.1
COORDINATES: similar to AA sequence:RefSeq:WP_015068116.1
COORDINATES: similar to AA sequence:RefSeq:WP_007615890.1
COORDINATES: similar to AA sequence:RefSeq:WP_010558913.1
helix-turn-helix transcriptional regulator
COORDINATES: similar to AA sequence:RefSeq:WP_010362030.1
COORDINATES: similar to AA sequence:RefSeq:WP_004588816.1
COORDINATES: similar to AA sequence:RefSeq:WP_006031461.1
COORDINATES: similar to AA sequence:RefSeq:WP_010366049.1
COORDINATES: protein motif:HMM:NF040293.1
COORDINATES: protein motif:HMM:NF012471.2
COORDINATES: similar to AA sequence:RefSeq:WP_010553098.1
COORDINATES: similar to AA sequence:RefSeq:WP_017218982.1
COORDINATES: similar to AA sequence:RefSeq:WP_017222147.1
GO:0010181 - FMN binding [Evidence IEA]; GO:0016646 - oxidoreductase activity, acting on the CH-NH group of donors, NAD or NADP as acceptor [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_005492240.1
COORDINATES: similar to AA sequence:RefSeq:WP_010364641.1
COORDINATES: similar to AA sequence:RefSeq:WP_010364639.1
COORDINATES: protein motif:HMM:NF012422.2
COORDINATES: protein motif:HMM:NF016612.2
neutral/alkaline non-lysosomal ceramidase N-terminal domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_018690852.1
COORDINATES: protein motif:HMM:NF024242.2
fibronectin type III domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_010369675.1
COORDINATES: protein motif:HMM:NF012301.2
GO:0000156 - phosphorelay response regulator activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_010362914.1
COORDINATES: similar to AA sequence:RefSeq:WP_010362915.1
hybrid sensor histidine kinase/response regulator
COORDINATES: similar to AA sequence:RefSeq:WP_010603793.1
COORDINATES: similar to AA sequence:RefSeq:WP_017217647.1
COORDINATES: similar to AA sequence:RefSeq:WP_011495029.1
GO:0031992 - energy transducer activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_006081425.1
COORDINATES: protein motif:HMM:NF006734.0
COORDINATES: protein motif:HMM:TIGR02937.1
GO:0003677 - DNA binding [Evidence IEA]; GO:0016987 - sigma factor activity [Evidence IEA]
GO:0006352 - DNA-templated transcription initiation [Evidence IEA]
sigma-70 family RNA polymerase sigma factor
COORDINATES: similar to AA sequence:RefSeq:WP_010369624.1
COORDINATES: similar to AA sequence:RefSeq:WP_010558376.1
COORDINATES: protein motif:HMM:NF024953.2
COORDINATES: protein motif:HMM:NF039408.1
COORDINATES: similar to AA sequence:RefSeq:WP_008301652.1
COORDINATES: similar to AA sequence:RefSeq:WP_010369623.1
COORDINATES: similar to AA sequence:RefSeq:WP_017217812.1
COORDINATES: similar to AA sequence:RefSeq:WP_013465725.1
COORDINATES: similar to AA sequence:RefSeq:WP_017218753.1
GO:0005509 - calcium ion binding [Evidence IEA]
COORDINATES: protein motif:HMM:NF024600.2
COORDINATES: similar to AA sequence:RefSeq:WP_010375685.1
COORDINATES: protein motif:HMM:NF024698.2
COORDINATES: similar to AA sequence:RefSeq:WP_010369683.1
COORDINATES: similar to AA sequence:RefSeq:WP_010369685.1
COORDINATES: similar to AA sequence:RefSeq:WP_010605245.1
OsmC domain/YcaO domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_010380436.1
COORDINATES: similar to AA sequence:RefSeq:WP_010367383.1
GO:0016787 - hydrolase activity [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]
COORDINATES: protein motif:HMM:NF017532.2
phytanoyl-CoA dioxygenase family protein
COORDINATES: protein motif:HMM:NF014661.2
COORDINATES: protein motif:HMM:TIGR01536.1
GO:0004066 - asparagine synthase (glutamine-hydrolyzing) activity [Evidence IEA]
GO:0006529 - asparagine biosynthetic process [Evidence IEA]
asparagine synthase (glutamine-hydrolyzing)
COORDINATES: protein motif:HMM:TIGR00702.1
COORDINATES: protein motif:HMM:TIGR03903.1
TOMM system kinase/cyclase fusion protein
COORDINATES: protein motif:HMM:NF012760.2
GO:0016742 - hydroxymethyl-, formyl- and related transferase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF019126.2
COORDINATES: protein motif:HMM:NF012211.1
COORDINATES: protein motif:HMM:NF016800.2
GO:0009103 - lipopolysaccharide biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_017218614.1
GO:0008168 - methyltransferase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_017216007.1
COORDINATES: similar to AA sequence:RefSeq:WP_008846424.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0003700 - DNA-binding transcription factor activity [Evidence IEA]; GO:0008134 - transcription factor binding [Evidence IEA]
RNA repair transcriptional activator RtcR
COORDINATES: similar to AA sequence:RefSeq:WP_020079880.1
GO:0008452 - RNA ligase activity [Evidence IEA]
GO:0006396 - RNA processing [Evidence IEA]
COORDINATES: protein motif:HMM:NF003246.0
GO:0003963 - RNA-3'-phosphate cyclase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011864405.1
nucleotidyltransferase domain-containing protein
tetratricopeptide repeat-containing sensor histidine kinase
COORDINATES: protein motif:HMM:NF012546.2
GO:0008236 - serine-type peptidase activity [Evidence IEA]
prolyl oligopeptidase family serine peptidase
GO:0004181 - metallocarboxypeptidase activity [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_010605260.1
COORDINATES: similar to AA sequence:RefSeq:WP_010605261.1
gamma-glutamylcyclotransferase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_019029770.1
COORDINATES: similar to AA sequence:RefSeq:WP_010375258.1
GO:0071111 - cyclic-guanylate-specific phosphodiesterase activity [Evidence IEA]; GO:0000156 - phosphorelay response regulator activity [Evidence IEA]
EAL domain-containing response regulator
COORDINATES: protein motif:HMM:NF019974.2
COORDINATES: similar to AA sequence:RefSeq:WP_010607503.1
COORDINATES: similar to AA sequence:RefSeq:WP_017218173.1
COORDINATES: similar to AA sequence:RefSeq:WP_010606229.1
COORDINATES: protein motif:HMM:NF018430.2
COORDINATES: similar to AA sequence:RefSeq:WP_017216655.1
COORDINATES: protein motif:HMM:NF012382.2
GO:0030170 - pyridoxal phosphate binding [Evidence IEA]
PLP-dependent aminotransferase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_010362003.1
aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme
COORDINATES: protein motif:HMM:NF018190.2
carbohydrate binding family 9 domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_010605289.1
COORDINATES: similar to AA sequence:RefSeq:WP_007378990.1
ectonucleotide pyrophosphatase/phosphodiesterase
COORDINATES: similar to AA sequence:RefSeq:WP_009838610.1
GO:0016153 - urocanate hydratase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_010380544.1
GO:0004397 - histidine ammonia-lyase activity [Evidence IEA]
GO:0006548 - histidine catabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_019026485.1
COORDINATES: similar to AA sequence:RefSeq:WP_010606224.1
COORDINATES: protein motif:HMM:NF024252.2
COORDINATES: protein motif:HMM:NF021633.2
COORDINATES: protein motif:HMM:NF025068.2
COORDINATES: protein motif:HMM:NF012398.2
GO:0050269 - coniferyl-aldehyde dehydrogenase activity [Evidence IEA]
GO:0006081 - cellular aldehyde metabolic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF013098.2
COORDINATES: similar to AA sequence:RefSeq:WP_008114083.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0016301 - kinase activity [Evidence IEA]
GO:0016310 - phosphorylation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_008134383.1
COORDINATES: similar to AA sequence:RefSeq:WP_007421115.1
COORDINATES: protein motif:HMM:NF012371.2
COORDINATES: similar to AA sequence:RefSeq:WP_016957287.1
COORDINATES: similar to AA sequence:RefSeq:WP_010558488.1
COORDINATES: similar to AA sequence:RefSeq:WP_007619907.1
serine hydrolase domain-containing protein
COORDINATES: protein motif:HMM:NF016207.2
FMN-binding negative transcriptional regulator
COORDINATES: similar to AA sequence:RefSeq:WP_017217596.1
COORDINATES: similar to AA sequence:RefSeq:WP_010603637.1
COORDINATES: similar to AA sequence:RefSeq:WP_010380606.1
COORDINATES: similar to AA sequence:RefSeq:WP_010380605.1
COORDINATES: similar to AA sequence:RefSeq:WP_010362052.1
GO:0016791 - phosphatase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_017218155.1
COORDINATES: similar to AA sequence:RefSeq:WP_010374822.1
COORDINATES: similar to AA sequence:RefSeq:WP_004335371.1
COORDINATES: similar to AA sequence:RefSeq:WP_010553403.1
COORDINATES: similar to AA sequence:RefSeq:WP_017218151.1
COORDINATES: similar to AA sequence:RefSeq:WP_005495525.1
COORDINATES: similar to AA sequence:RefSeq:WP_009840389.1
GO:0004725 - protein tyrosine phosphatase activity [Evidence IEA]
GO:0006470 - protein dephosphorylation [Evidence IEA]
low molecular weight protein-tyrosine-phosphatase
COORDINATES: similar to AA sequence:RefSeq:WP_008138691.1
GO:0071949 - FAD binding [Evidence IEA]; GO:0020037 - heme binding [Evidence IEA]; GO:0008941 - nitric oxide dioxygenase activity [Evidence IEA]; GO:0019825 - oxygen binding [Evidence IEA]
GO:0051409 - response to nitrosative stress [Evidence IEA]
COORDINATES: protein motif:HMM:NF017727.2
COORDINATES: similar to AA sequence:RefSeq:WP_010362102.1
COORDINATES: similar to AA sequence:RefSeq:WP_010362103.1
nitric oxide reductase transcriptional regulator NorR
COORDINATES: similar to AA sequence:RefSeq:WP_010362104.1
GO:0008199 - ferric iron binding [Evidence IEA]; GO:0004322 - ferroxidase activity [Evidence IEA]
GO:0006880 - intracellular sequestering of iron ion [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_010362105.1
COORDINATES: protein motif:HMM:NF014686.2
GO:0005524 - ATP binding [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]
COORDINATES: protein motif:HMM:NF012437.2
GO:0009975 - cyclase activity [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0016849 - phosphorus-oxygen lyase activity [Evidence IEA]; GO:0032555 - purine ribonucleotide binding [Evidence IEA]
adenylate/guanylate cyclase domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_010558894.1
ABC transporter substrate-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_008115289.1
COORDINATES: protein motif:HMM:TIGR00573.1
GO:0004527 - exonuclease activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF018644.2
COORDINATES: similar to AA sequence:RefSeq:WP_017215977.1
cation:dicarboxylase symporter family transporter
COORDINATES: similar to AA sequence:RefSeq:WP_010379126.1
COORDINATES: similar to AA sequence:RefSeq:WP_005491646.1
COORDINATES: protein motif:HMM:NF025879.2
COORDINATES: similar to AA sequence:RefSeq:WP_010362114.1
COORDINATES: similar to AA sequence:RefSeq:WP_010375466.1
GO:0051537 - 2 iron, 2 sulfur cluster binding [Evidence IEA]; GO:0003677 - DNA binding [Evidence IEA]; GO:0003700 - DNA-binding transcription factor activity [Evidence IEA]
GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]; GO:0006979 - response to oxidative stress [Evidence IEA]
redox-sensitive transcriptional activator SoxR
COORDINATES: similar to AA sequence:RefSeq:WP_010606483.1
GO:0009055 - electron transfer activity [Evidence IEA]; GO:0010181 - FMN binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_010361751.1
COORDINATES: similar to AA sequence:RefSeq:WP_013345681.1
GO:0015209 - cytosine transmembrane transporter activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011327906.1
GO:0042910 - xenobiotic transmembrane transporter activity [Evidence IEA]
GO:0042908 - xenobiotic transport [Evidence IEA]
COORDINATES: protein motif:HMM:NF016041.2
GO:0008610 - lipid biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_006033523.1
COORDINATES: similar to AA sequence:RefSeq:WP_019026888.1
COORDINATES: similar to AA sequence:RefSeq:WP_010379317.1
COORDINATES: protein motif:HMM:NF016107.2
isoprenylcysteine carboxylmethyltransferase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_006792659.1
threonine/serine exporter family protein
COORDINATES: similar to AA sequence:RefSeq:WP_008165796.1
COORDINATES: similar to AA sequence:RefSeq:WP_010362131.1
GO:0003700 - DNA-binding transcription factor activity [Evidence IEA]; GO:0043565 - sequence-specific DNA binding [Evidence IEA]; GO:0000976 - transcription cis-regulatory region binding [Evidence IEA]
GO:0006351 - DNA-templated transcription [Evidence IEA]; GO:0045892 - negative regulation of DNA-templated transcription [Evidence IEA]; GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
LacI family DNA-binding transcriptional regulator
COORDINATES: similar to AA sequence:RefSeq:WP_017217544.1
COORDINATES: similar to AA sequence:RefSeq:WP_016898913.1
COORDINATES: similar to AA sequence:RefSeq:WP_010604253.1
COORDINATES: similar to AA sequence:RefSeq:WP_005491720.1
COORDINATES: similar to AA sequence:RefSeq:WP_010362137.1
COORDINATES: similar to AA sequence:RefSeq:WP_004587118.1
GO:0102039 - NADH-dependent peroxiredoxin activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_010377861.1
GO:0016668 - oxidoreductase activity, acting on a sulfur group of donors, NAD(P) as acceptor [Evidence IEA]
GO:0009398 - FMN biosynthetic process [Evidence IEA]; GO:0006805 - xenobiotic metabolic process [Evidence IEA]
carboxypeptidase-like regulatory domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_010362149.1
COORDINATES: similar to AA sequence:RefSeq:WP_010604562.1
carboxymuconolactone decarboxylase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_010372478.1
COORDINATES: similar to AA sequence:RefSeq:WP_011864818.1
COORDINATES: similar to AA sequence:RefSeq:WP_019614215.1
COORDINATES: protein motif:HMM:NF023277.2
COORDINATES: similar to AA sequence:RefSeq:WP_011235048.1
COORDINATES: similar to AA sequence:RefSeq:WP_008466976.1
COORDINATES: similar to AA sequence:RefSeq:WP_016706888.1
COORDINATES: similar to AA sequence:RefSeq:WP_010607439.1
COORDINATES: protein motif:HMM:NF024880.2
COORDINATES: similar to AA sequence:RefSeq:WP_009840064.1
GO:0008828 - dATP diphosphatase activity [Evidence IEA]; GO:0019177 - dihydroneopterin triphosphate pyrophosphohydrolase activity [Evidence IEA]
GO:0046656 - folic acid biosynthetic process [Evidence IEA]
dihydroneopterin triphosphate diphosphatase
COORDINATES: similar to AA sequence:RefSeq:WP_017218219.1
M6 family metalloprotease domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_019612721.1
COORDINATES: similar to AA sequence:RefSeq:WP_007103614.1
COORDINATES: similar to AA sequence:RefSeq:WP_010385267.1
COORDINATES: similar to AA sequence:RefSeq:WP_010371774.1
acyl-CoA thioester hydrolase/BAAT C-terminal domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_010371777.1
LytTR family DNA-binding domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_017218615.1
GO:0000155 - phosphorelay sensor kinase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011497569.1
COORDINATES: similar to AA sequence:RefSeq:WP_007642377.1
COORDINATES: similar to AA sequence:RefSeq:WP_016706757.1
COORDINATES: similar to AA sequence:RefSeq:WP_016706756.1
COORDINATES: similar to AA sequence:RefSeq:WP_016706754.1
COORDINATES: similar to AA sequence:RefSeq:WP_007648361.1
GO:0010181 - FMN binding [Evidence IEA]; GO:0003955 - NAD(P)H dehydrogenase (quinone) activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_017218630.1
COORDINATES: similar to AA sequence:RefSeq:WP_017218631.1
COORDINATES: similar to AA sequence:RefSeq:WP_017218632.1
COORDINATES: similar to AA sequence:RefSeq:WP_010366137.1
COORDINATES: similar to AA sequence:RefSeq:WP_010371712.1
COORDINATES: similar to AA sequence:RefSeq:WP_010371709.1
COORDINATES: protein motif:HMM:NF012907.2
COORDINATES: protein motif:HMM:NF015338.2
COORDINATES: protein motif:HMM:NF026992.2
COORDINATES: protein motif:HMM:NF025078.2
COORDINATES: similar to AA sequence:RefSeq:WP_017218638.1
COORDINATES: similar to AA sequence:RefSeq:WP_017218639.1
COORDINATES: similar to AA sequence:RefSeq:WP_010371699.1
COORDINATES: similar to AA sequence:RefSeq:WP_017218641.1
COORDINATES: similar to AA sequence:RefSeq:WP_010371693.1
COORDINATES: similar to AA sequence:RefSeq:WP_010371690.1
COORDINATES: similar to AA sequence:RefSeq:WP_010371687.1
COORDINATES: similar to AA sequence:RefSeq:WP_010371682.1
COORDINATES: similar to AA sequence:RefSeq:WP_010371679.1
COORDINATES: similar to AA sequence:RefSeq:WP_010371676.1
COORDINATES: similar to AA sequence:RefSeq:WP_010371674.1
COORDINATES: protein motif:HMM:NF024589.2
COORDINATES: similar to AA sequence:RefSeq:WP_010555746.1
COORDINATES: similar to AA sequence:RefSeq:WP_017217736.1
COORDINATES: similar to AA sequence:RefSeq:WP_010607104.1
hybrid non-ribosomal peptide synthetase/type I polyketide synthase
COORDINATES: similar to AA sequence:RefSeq:WP_010368781.1
GO:0051213 - dioxygenase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_010607108.1
COORDINATES: similar to AA sequence:RefSeq:WP_010607109.1
COORDINATES: similar to AA sequence:RefSeq:WP_017217212.1
COORDINATES: similar to AA sequence:RefSeq:WP_010607110.1
COORDINATES: similar to AA sequence:RefSeq:WP_017217210.1
GO:0005743 - mitochondrial inner membrane [Evidence IEA]; GO:0035632 - mitochondrial prohibitin complex [Evidence IEA]
COORDINATES: protein motif:HMM:NF015437.2
hybrid sensor histidine kinase/response regulator transcription factor
COORDINATES: similar to AA sequence:RefSeq:WP_010555517.1
COORDINATES: protein motif:HMM:TIGR03238.1
GO:0009307 - DNA restriction-modification system [Evidence IEA]
DNA phosphorothioation-dependent restriction protein DptF
COORDINATES: protein motif:HMM:TIGR03236.1
DNA phosphorothioation-dependent restriction protein DptG
COORDINATES: protein motif:HMM:TIGR03237.1
DNA phosphorothioation-dependent restriction protein DptH
COORDINATES: protein motif:HMM:NF024783.2
COORDINATES: protein motif:HMM:TIGR03187.1
COORDINATES: similar to AA sequence:RefSeq:WP_016403378.1
COORDINATES: similar to AA sequence:RefSeq:WP_007642408.1
COORDINATES: similar to AA sequence:RefSeq:WP_007642406.1
DNA phosphorothioation system sulfurtransferase DndC
COORDINATES: similar to AA sequence:RefSeq:WP_017039698.1
COORDINATES: similar to AA sequence:RefSeq:WP_016899090.1
DNA phosphorothioation-associated putative methyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_010375347.1
COORDINATES: protein motif:HMM:NF024901.2
COORDINATES: protein motif:HMM:NF012655.2
COORDINATES: similar to AA sequence:RefSeq:WP_012143252.1
COORDINATES: similar to AA sequence:RefSeq:WP_019029623.1
COORDINATES: similar to AA sequence:RefSeq:WP_006791637.1
GO:0006520 - amino acid metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_010377619.1
COORDINATES: similar to AA sequence:RefSeq:WP_007617923.1
esterase-like activity of phytase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_007620942.1
aspartate/glutamate racemase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_010377769.1
COORDINATES: similar to AA sequence:RefSeq:WP_017218205.1
COORDINATES: similar to AA sequence:RefSeq:WP_018984165.1
COORDINATES: similar to AA sequence:RefSeq:WP_010605074.1
substrate-binding domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_005491678.1
COORDINATES: similar to AA sequence:RefSeq:WP_010389324.1
GO:0004555 - alpha,alpha-trehalase activity [Evidence IEA]
GO:0005991 - trehalose metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_010604947.1
COORDINATES: protein motif:HMM:NF019976.2
COORDINATES: similar to AA sequence:RefSeq:WP_010375246.1
GO:0008324 - monoatomic cation transmembrane transporter activity [Evidence IEA]
cation diffusion facilitator family transporter
COORDINATES: similar to AA sequence:RefSeq:WP_017218168.1
COORDINATES: similar to AA sequence:RefSeq:WP_016706844.1
COORDINATES: similar to AA sequence:RefSeq:WP_010554007.1
COORDINATES: similar to AA sequence:RefSeq:WP_011329914.1
COORDINATES: similar to AA sequence:RefSeq:WP_010374838.1
AlkA N-terminal domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_010607515.1
GO:0003677 - DNA binding [Evidence IEA]; GO:0003908 - methylated-DNA-[protein]-cysteine S-methyltransferase activity [Evidence IEA]
methylated-DNA--[protein]-cysteine S-methyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_010361773.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0004797 - thymidine kinase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_010389131.1
GO:0008988 - rRNA (adenine-N6-)-methyltransferase activity [Evidence IEA]
GO:0006364 - rRNA processing [Evidence IEA]
23S rRNA (adenine(1618)-N(6))-methyltransferase RlmF
COORDINATES: similar to AA sequence:RefSeq:WP_005491762.1
COORDINATES: similar to AA sequence:RefSeq:WP_010605201.1
COORDINATES: similar to AA sequence:RefSeq:WP_010556768.1
COORDINATES: similar to AA sequence:RefSeq:WP_010605203.1
COORDINATES: similar to AA sequence:RefSeq:WP_010379231.1
COORDINATES: similar to AA sequence:RefSeq:WP_006005083.1
COORDINATES: similar to AA sequence:RefSeq:WP_006005082.1
COORDINATES: similar to AA sequence:RefSeq:WP_011759511.1
COORDINATES: similar to AA sequence:RefSeq:WP_002960102.1
COORDINATES: similar to AA sequence:RefSeq:WP_008138317.1
COORDINATES: similar to AA sequence:RefSeq:WP_004586810.1
exo 1,3/1,4-beta-D-glucan glucohydrolase
COORDINATES: similar to AA sequence:RefSeq:WP_010379233.1
COORDINATES: similar to AA sequence:RefSeq:WP_008171417.1
COORDINATES: similar to AA sequence:RefSeq:WP_010361784.1
COORDINATES: similar to AA sequence:RefSeq:WP_011866808.1
COORDINATES: similar to AA sequence:RefSeq:WP_010361785.1
COORDINATES: similar to AA sequence:RefSeq:WP_010553983.1
COORDINATES: similar to AA sequence:RefSeq:WP_005491773.1
COORDINATES: similar to AA sequence:RefSeq:WP_010379248.1
COORDINATES: similar to AA sequence:RefSeq:WP_010379251.1
COORDINATES: similar to AA sequence:RefSeq:WP_008138583.1
COORDINATES: similar to AA sequence:RefSeq:WP_004586373.1
COORDINATES: similar to AA sequence:RefSeq:WP_010361795.1
COORDINATES: similar to AA sequence:RefSeq:WP_010373171.1
COORDINATES: similar to AA sequence:RefSeq:WP_002959021.1
GO:0008964 - phosphoenolpyruvate carboxylase activity [Evidence IEA]
GO:0015977 - carbon fixation [Evidence IEA]; GO:0006099 - tricarboxylic acid cycle [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_010361802.1
COORDINATES: protein motif:HMM:NF006537.0
GO:0004126 - cytidine deaminase activity [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA]
GO:0009972 - cytidine deamination [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_010605330.1
GO:0016763 - pentosyltransferase activity [Evidence IEA]
GO:0009116 - nucleoside metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_016900498.1
COORDINATES: similar to AA sequence:RefSeq:WP_010361806.1
COORDINATES: similar to AA sequence:RefSeq:WP_010361807.1
COORDINATES: similar to AA sequence:RefSeq:WP_009836916.1
COORDINATES: protein motif:HMM:NF019029.2
COORDINATES: similar to AA sequence:RefSeq:WP_010373121.1
COORDINATES: similar to AA sequence:RefSeq:WP_002959042.1
GO:0016034 - maleylacetoacetate isomerase activity [Evidence IEA]
GO:0006559 - L-phenylalanine catabolic process [Evidence IEA]; GO:0006572 - tyrosine catabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_010605337.1
GO:0004411 - homogentisate 1,2-dioxygenase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_005492761.1
COORDINATES: similar to AA sequence:RefSeq:WP_006791681.1
COORDINATES: similar to AA sequence:RefSeq:WP_017216714.1
COORDINATES: similar to AA sequence:RefSeq:WP_010361819.1
PhnD/SsuA/transferrin family substrate-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_010389035.1
COORDINATES: similar to AA sequence:RefSeq:WP_017216718.1
GO:0016787 - hydrolase activity [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]
GO:0009166 - nucleotide catabolic process [Evidence IEA]
bifunctional UDP-sugar hydrolase/5'-nucleotidase UshA
COORDINATES: similar to AA sequence:RefSeq:WP_010361822.1
COORDINATES: similar to AA sequence:RefSeq:WP_010361824.1
COORDINATES: protein motif:HMM:NF015823.2
ABC-type transport auxiliary lipoprotein family protein
COORDINATES: similar to AA sequence:RefSeq:WP_010556724.1
COORDINATES: similar to AA sequence:RefSeq:WP_010373094.1
COORDINATES: similar to AA sequence:RefSeq:WP_010373092.1
COORDINATES: similar to AA sequence:RefSeq:WP_007375531.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0016887 - ATP hydrolysis activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011329986.1
GO:0006457 - protein folding [Evidence IEA]; GO:0009408 - response to heat [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_010605355.1
GO:0002161 - aminoacyl-tRNA editing activity [Evidence IEA]
GO:0043039 - tRNA aminoacylation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004588700.1
COORDINATES: protein motif:HMM:NF014954.2
COORDINATES: similar to AA sequence:RefSeq:WP_010605358.1
COORDINATES: similar to AA sequence:RefSeq:WP_017216730.1
COORDINATES: protein motif:HMM:NF024799.2
COORDINATES: protein motif:HMM:NF019008.2
GO:0042597 - periplasmic space [Evidence IEA]
GO:0009055 - electron transfer activity [Evidence IEA]; GO:0020037 - heme binding [Evidence IEA]; GO:0005506 - iron ion binding [Evidence IEA]
GO:0022900 - electron transport chain [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_138543625.1
rhombosortase-dependent cadherin domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_010373062.1
COORDINATES: similar to AA sequence:RefSeq:WP_002958653.1
COORDINATES: similar to AA sequence:RefSeq:WP_010361849.1
GO:0008840 - 4-hydroxy-tetrahydrodipicolinate synthase activity [Evidence IEA]
GO:0009089 - lysine biosynthetic process via diaminopimelate [Evidence IEA]
4-hydroxy-tetrahydrodipicolinate synthase
COORDINATES: similar to AA sequence:RefSeq:WP_010388961.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0016887 - ATP hydrolysis activity [Evidence IEA]; GO:0004386 - helicase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_010361860.1
COORDINATES: similar to AA sequence:RefSeq:WP_016899668.1
GO:0015558 - secondary active p-aminobenzoyl-glutamate transmembrane transporter activity [Evidence IEA]
GO:1902604 - p-aminobenzoyl-glutamate transmembrane transport [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_002958616.1
COORDINATES: similar to AA sequence:RefSeq:WP_005492713.1
COORDINATES: similar to AA sequence:RefSeq:WP_010605382.1
COORDINATES: similar to AA sequence:RefSeq:WP_013782810.1
COORDINATES: similar to AA sequence:RefSeq:WP_011330050.1
COORDINATES: similar to AA sequence:RefSeq:WP_010605388.1
GO:0008791 - arginine N-succinyltransferase activity [Evidence IEA]
GO:0006527 - arginine catabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_008127881.1
aspartate aminotransferase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_002958609.1
Lrp/AsnC family transcriptional regulator
COORDINATES: similar to AA sequence:RefSeq:WP_010559115.1
COORDINATES: similar to AA sequence:RefSeq:WP_010361874.1
isoamylase early set domain-containing protein
COORDINATES: protein motif:HMM:NF014499.2
GO:0004134 - 4-alpha-glucanotransferase activity [Evidence IEA]
GO:0005980 - glycogen catabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_017216765.1
GO:0003844 - 1,4-alpha-glucan branching enzyme activity [Evidence IEA]; GO:0043169 - cation binding [Evidence IEA]; GO:0004553 - hydrolase activity, hydrolyzing O-glycosyl compounds [Evidence IEA]
GO:0005975 - carbohydrate metabolic process [Evidence IEA]; GO:0005978 - glycogen biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_005492699.1
GO:0004133 - glycogen debranching enzyme activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_010605395.1
glycogen/starch/alpha-glucan phosphorylase
COORDINATES: similar to AA sequence:RefSeq:WP_006791778.1
GO:0008878 - glucose-1-phosphate adenylyltransferase activity [Evidence IEA]
GO:0005978 - glycogen biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_009836705.1
COORDINATES: similar to AA sequence:RefSeq:WP_010605397.1
COORDINATES: protein motif:HMM:NF016150.2
COORDINATES: similar to AA sequence:RefSeq:WP_010372967.1
GO:0009982 - pseudouridine synthase activity [Evidence IEA]; GO:0003723 - RNA binding [Evidence IEA]
GO:0001522 - pseudouridine synthesis [Evidence IEA]
23S rRNA pseudouridine(2604) synthase RluF
COORDINATES: similar to AA sequence:RefSeq:WP_005492689.1
COORDINATES: similar to AA sequence:RefSeq:WP_010361887.1
COORDINATES: similar to AA sequence:RefSeq:WP_010361888.1
COORDINATES: similar to AA sequence:RefSeq:WP_016706690.1
GO:0003824 - catalytic activity [Evidence IEA]; GO:0003677 - DNA binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_010605454.1
DUF523 and DUF1722 domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_008137094.1
COORDINATES: similar to AA sequence:RefSeq:WP_016706673.1
GO:0030261 - chromosome condensation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_010377111.1
GO:1990610 - acetolactate synthase regulator activity [Evidence IEA]
GO:0009082 - branched-chain amino acid biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_010605491.1
GO:0003984 - acetolactate synthase activity [Evidence IEA]; GO:0050660 - flavin adenine dinucleotide binding [Evidence IEA]; GO:0000287 - magnesium ion binding [Evidence IEA]; GO:0030976 - thiamine pyrophosphate binding [Evidence IEA]
COORDINATES: protein motif:HMM:NF017368.2
GO:0008233 - peptidase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_006793428.1
GO:0016616 - oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_010381163.1
COORDINATES: similar to AA sequence:RefSeq:WP_010361908.1
GO:0017108 - 5'-flap endonuclease activity [Evidence IEA]; GO:0003677 - DNA binding [Evidence IEA]
GO:0033567 - DNA replication, Okazaki fragment processing [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_010388893.1
nucleotide 5'-monophosphate nucleosidase PpnN
COORDINATES: similar to AA sequence:RefSeq:WP_010556215.1
GO:0009975 - cyclase activity [Evidence IEA]
GO:0009966 - regulation of signal transduction [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_010388891.1
COORDINATES: similar to AA sequence:RefSeq:WP_010377130.1
COORDINATES: similar to AA sequence:RefSeq:WP_002960271.1
GO:0004635 - phosphoribosyl-AMP cyclohydrolase activity [Evidence IEA]; GO:0004636 - phosphoribosyl-ATP diphosphatase activity [Evidence IEA]
GO:0000105 - histidine biosynthetic process [Evidence IEA]
bifunctional phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP diphosphatase HisIE
COORDINATES: similar to AA sequence:RefSeq:WP_011330107.1
GO:0000107 - imidazoleglycerol-phosphate synthase activity [Evidence IEA]
imidazole glycerol phosphate synthase subunit HisF
COORDINATES: similar to AA sequence:RefSeq:WP_006793444.1
GO:0003949 - 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino]imidazole-4- carboxamide isomerase activity [Evidence IEA]
1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino]imidazole-4- carboxamide isomerase
COORDINATES: similar to AA sequence:RefSeq:WP_002960265.1
GO:0016884 - carbon-nitrogen ligase activity, with glutamine as amido-N-donor [Evidence IEA]; GO:0000107 - imidazoleglycerol-phosphate synthase activity [Evidence IEA]
imidazole glycerol phosphate synthase subunit HisH
COORDINATES: similar to AA sequence:RefSeq:WP_007580650.1
GO:0004401 - histidinol-phosphatase activity [Evidence IEA]; GO:0004424 - imidazoleglycerol-phosphate dehydratase activity [Evidence IEA]
bifunctional histidinol-phosphatase/imidazoleglycerol-phosphate dehydratase HisB
COORDINATES: similar to AA sequence:RefSeq:WP_010377148.1
GO:0004400 - histidinol-phosphate transaminase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_017216830.1
GO:0004399 - histidinol dehydrogenase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011330118.1
GO:0003879 - ATP phosphoribosyltransferase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012144091.1
COORDINATES: protein motif:HMM:NF018630.2
COORDINATES: similar to AA sequence:RefSeq:WP_010377159.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0003677 - DNA binding [Evidence IEA]; GO:0004386 - helicase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_017216824.1
GO:0003725 - double-stranded RNA binding [Evidence IEA]
GO:0006400 - tRNA modification [Evidence IEA]
tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex dimerization subunit type 1 TsaB
COORDINATES: similar to AA sequence:RefSeq:WP_010556199.1
COORDINATES: similar to AA sequence:RefSeq:WP_005492360.1
COORDINATES: similar to AA sequence:RefSeq:WP_008167159.1
COORDINATES: protein motif:HMM:NF024109.2
COORDINATES: similar to AA sequence:RefSeq:WP_016900167.1
COORDINATES: similar to AA sequence:RefSeq:WP_010361932.1
GO:0016891 - endoribonuclease activity, producing 5'-phosphomonoesters [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_006793461.1
GO:0032955 - regulation of division septum assembly [Evidence IEA]
cell division topological specificity factor MinE
COORDINATES: similar to AA sequence:RefSeq:WP_006793462.1
GO:0016887 - ATP hydrolysis activity [Evidence IEA]
GO:0000918 - division septum site selection [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_008131728.1
GO:0004857 - enzyme inhibitor activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_006793464.1
COORDINATES: similar to AA sequence:RefSeq:WP_006793465.1
COORDINATES: similar to AA sequence:RefSeq:WP_010372949.1
GO:0070069 - cytochrome complex [Evidence IEA]; GO:0005886 - plasma membrane [Evidence IEA]
GO:0009055 - electron transfer activity [Evidence IEA]
GO:0006119 - oxidative phosphorylation [Evidence IEA]
cytochrome d ubiquinol oxidase subunit II
COORDINATES: similar to AA sequence:RefSeq:WP_010361939.1
GO:0070069 - cytochrome complex [Evidence IEA]; GO:0016020 - membrane [Evidence IEA]
GO:0009055 - electron transfer activity [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]
GO:0019646 - aerobic electron transport chain [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_010605404.1
COORDINATES: similar to AA sequence:RefSeq:WP_010558600.1
GO:0051920 - peroxiredoxin activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_010365772.1
COORDINATES: protein motif:HMM:NF024966.2
COORDINATES: protein motif:HMM:NF014763.2
COORDINATES: similar to AA sequence:RefSeq:WP_010372930.1
GGDEF domain-containing phosphodiesterase
COORDINATES: similar to AA sequence:RefSeq:WP_016706408.1
GO:0004325 - ferrochelatase activity [Evidence IEA]
GO:0006779 - porphyrin-containing compound biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004729586.1
GO:0006935 - chemotaxis [Evidence IEA]; GO:0007165 - signal transduction [Evidence IEA]
PAS domain-containing methyl-accepting chemotaxis protein
COORDINATES: similar to AA sequence:RefSeq:WP_008464923.1
COORDINATES: similar to AA sequence:RefSeq:WP_017219484.1
heme NO-binding domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_008132344.1
COORDINATES: similar to AA sequence:RefSeq:WP_010367337.1
COORDINATES: similar to AA sequence:RefSeq:WP_010367339.1
COORDINATES: similar to AA sequence:RefSeq:WP_010367347.1
COORDINATES: similar to AA sequence:RefSeq:WP_005495560.1
COORDINATES: protein motif:HMM:NF015647.2
COORDINATES: similar to AA sequence:RefSeq:WP_010605514.1
COORDINATES: protein motif:HMM:NF019315.2
COORDINATES: similar to AA sequence:RefSeq:WP_005492345.1
COORDINATES: similar to AA sequence:RefSeq:WP_008131733.1
COORDINATES: similar to AA sequence:RefSeq:WP_017217861.1
COORDINATES: similar to AA sequence:RefSeq:WP_009836636.1
GO:0016301 - kinase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_010361950.1
COORDINATES: similar to AA sequence:RefSeq:WP_017216859.1
COORDINATES: similar to AA sequence:RefSeq:WP_017216858.1
GO:0016798 - hydrolase activity, acting on glycosyl bonds [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_010361953.1
COORDINATES: similar to AA sequence:RefSeq:WP_019647596.1
COORDINATES: similar to AA sequence:RefSeq:WP_008169959.1
COORDINATES: similar to AA sequence:RefSeq:WP_010361956.1
GO:0015031 - protein transport [Evidence IEA]
MotA/TolQ/ExbB proton channel family protein
COORDINATES: similar to AA sequence:RefSeq:WP_010378705.1
GO:0015252 - proton channel activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_006793481.1
COORDINATES: similar to AA sequence:RefSeq:WP_010378710.1
COORDINATES: similar to AA sequence:RefSeq:WP_010378712.1
COORDINATES: similar to AA sequence:RefSeq:WP_010605499.1
COORDINATES: similar to AA sequence:RefSeq:WP_010378716.1
TonB-dependent receptor plug domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_004586337.1
GO:0004073 - aspartate-semialdehyde dehydrogenase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_010366558.1
COORDINATES: similar to AA sequence:RefSeq:WP_010376775.1
COORDINATES: similar to AA sequence:RefSeq:WP_010377565.1
COORDINATES: similar to AA sequence:RefSeq:WP_018692723.1
GO:0015074 - DNA integration [Evidence IEA]; GO:0006310 - DNA recombination [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_005492293.1
GO:0050660 - flavin adenine dinucleotide binding [Evidence IEA]; GO:0051536 - iron-sulfur cluster binding [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]
FAD-binding and (Fe-S)-binding domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_010365332.1
COORDINATES: similar to AA sequence:RefSeq:WP_012518192.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0008986 - pyruvate, water dikinase activity [Evidence IEA]; GO:0016772 - transferase activity, transferring phosphorus-containing groups [Evidence IEA]
GO:0016310 - phosphorylation [Evidence IEA]; GO:0006090 - pyruvate metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004586305.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0016776 - phosphotransferase activity, phosphate group as acceptor [Evidence IEA]; GO:0004674 - protein serine/threonine kinase activity [Evidence IEA]
GO:0006470 - protein dephosphorylation [Evidence IEA]; GO:0006468 - protein phosphorylation [Evidence IEA]
pyruvate, water dikinase regulatory protein
COORDINATES: similar to AA sequence:RefSeq:WP_010378652.1
GO:0003849 - 3-deoxy-7-phosphoheptulonate synthase activity [Evidence IEA]
GO:0009423 - chorismate biosynthetic process [Evidence IEA]
3-deoxy-7-phosphoheptulonate synthase class II
COORDINATES: similar to AA sequence:RefSeq:WP_007378806.1
GO:0006274 - DNA replication termination [Evidence IEA]
DNA replication terminus site-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_013463357.1