Pseudoalteromonas luteoviolacea strain H2 plasmid plas_H2_1, whole genome shotgun sequence.
type: Entry
definition: Pseudoalteromonas luteoviolacea strain H2 plasmid plas_H2_1, whole genome shotgun sequence.
sequence version: NZ_CM017106.1
sequence date: 2023-04-28
sequence: sequence
division: CON
label: NZ_CM017106.1
type: RefSeq
SIO_000068: refseq
dblink: PRJNA224116
dblink: SAMN12060782
keyword: WGS
keyword: RefSeq
source: Pseudoalteromonas luteoviolacea
organism: Pseudoalteromonas luteoviolacea
taxonomy: Bacteria; Pseudomonadota; Gammaproteobacteria; Alteromonadales; Pseudoalteromonadaceae; Pseudoalteromonas.
reference: 1
reference: 2
comment: REFSEQ INFORMATION: The reference sequence is identical to\nCM017106.1.\nBacteria and source DNA available from Michael Hadfield, Hawaii.\nThe annotation was added by the NCBI Prokaryotic Genome Annotation\nPipeline (PGAP). Information about PGAP can be found here:\nhttps://www.ncbi.nlm.nih.gov/genome/annotation_prok/\n\n##Genome-Assembly-Data-START##\nAssembly Date :: 2019\nAssembly Method :: SPAdes v. 3.11.1\nGenome Representation :: Full\nExpected Final Version :: Yes\nGenome Coverage :: 0.97x\nSequencing Technology :: Illumina MiSeq; Oxford Nanopore MiniION\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI RefSeq\nAnnotation Date :: 04/28/2023 03:32:28\nAnnotation Pipeline :: NCBI Prokaryotic Genome\n Annotation Pipeline (PGAP)\nAnnotation Method :: Best-placed reference protein\n set; GeneMarkS-2+\nAnnotation Software revision :: 6.5\nFeatures Annotated :: Gene; CDS; rRNA; tRNA; ncRNA\nGenes (total) :: 5,202\nCDSs (total) :: 5,044\nGenes (coding) :: 5,024\nCDSs (with protein) :: 5,024\nGenes (RNA) :: 158\nrRNAs :: 10, 11, 12 (5S, 16S, 23S)\ncomplete rRNAs :: 10, 10, 10 (5S, 16S, 23S)\npartial rRNAs :: 1, 2 (16S, 23S)\ntRNAs :: 120\nncRNAs :: 5\nPseudo Genes (total) :: 20\nCDSs (without protein) :: 20\nPseudo Genes (ambiguous residues) :: 0 of 20\nPseudo Genes (frameshifted) :: 8 of 20\nPseudo Genes (incomplete) :: 15 of 20\nPseudo Genes (internal stop) :: 5 of 20\nPseudo Genes (multiple problems) :: 7 of 20\n##Genome-Annotation-Data-END##\nCOMPLETENESS: full length.

sequence
subclass of: SO_0000155
sequence length: 55519
topology: circular
so has quality: SO_0000988
location: 1..55519
location: region:1-55519:1
RO_0002162: 43657

NZ_CM017106
type: RefSeq
SIO_000068: refseq

PRJNA224116
type: BioProject
SIO_000068: bioproject

SAMN12060782
type: BioSample
SIO_000068: biosample

1
title: Larvae of Pocillopora damicornis (Anthozoa) settle and metamorphose in response to surface-biofilm bacteria
author: Tran, C.
author: Hadfield, M.
journal: Mar. Ecol. Prog. Ser. 433, 85-96 (2011)

2
title: Direct Submission
author: Summers, S.
journal: Submitted (17-JUN-2019) SCELSE, Nanyang Technological University, 60 Nanyang Drive, Singapore 637551, Singapore

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:55519:1
position: 55519
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-55519:1:source
so part of: sequence
organism: Pseudoalteromonas luteoviolacea
mol type: genomic DNA
strain: H2
isolation source: Glass slide place on reef flat in natural environment
plasmid: plas_H2_1
country: USA: Hawaii
lat lon: 21.2733 N 157.4900 W
collection date: 2011-01-01

43657
type: Taxonomy
SIO_000068: taxonomy

FLM44_RS04435
type: Gene
subclass of: SO_0000704
RO_0002162: 43657
locus tag: FLM44_RS04435
old locus tag: FLM44_25450
so part of: sequence
location: 62..2389
location: region:62-2389:1
so has part: feature:62-2389:1:exon
subclass of: SO_0000010

57360638
type: Gene
SIO_000068: ncbigene

position:62:1
position: 62
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2389:1
position: 2389
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:62-2389:1:exon

FLM44_RS04435
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 43657
locus tag: FLM44_RS04435
old locus tag: FLM44_25450
inference: COORDINATES: similar to AA sequence:RefSeq:WP_019615706.1
GO component: GO:0016020 - membrane [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: MMPL family transporter
translation: MTKSVSQHLIKWRYALSIIVLIGVYFLHGGSKYISFSQDYQDWFHKDNPQLKSHLNIQRTYEKSDNVTFLLTPKDGNIFTRESLASLEWLTEQAWQMPASTRVNSLINFQHTSAIGDDLLVEELVQEAAQLSDSELKLVEKIALSEPAIKDLLVSSDGRVAAVTVTINITPDTPGGNPGVTAFARDLISQLKKINPNIDMHLTGLTVMDTAFIEASAKDMDNLTPLMFAVIILGLLLLLRSFFATASICVIVVLSIMSAMGFSGWINIPLTAPSATSPTIIMTIAVANSVHIVLAYLRSLSQDRAKIEAMMEALSANLQPVALANLTTIIGFLTMHFSDIAPFHHLGNMIAMGVFVSFLLSFTVLPVLLILLPIKARKLSENGGFFAKKLSEFVIDRRRLLLPVLLITSGILSAGLLNNQMNEVISAYFDKSTLFRQHTDYASEHLTGPYYLEFSVDSGIEGGISEPRFLNQLDKFSNWLKNQPEVVHVLSLSDTMKRLNKNLNGDDPNEYKLPVEQSQASQYLLLYDMSLPYGMDMSNQVNIKKSATRIFVSLHNLSTQQMLGLTERTSDWFSSNTSGLTLHFSSPTYMFSNIASRAVDRMAISVLVAMTLIGFFITIALKSLKMGLLSLIPNTLPPAVAFGLWGYFNGEVSFAMAIGVTVAIGIIVDDTVHFLSKYMYGRKEKGLSPENSIRYAFEQVSSALIVTSIVLTAGFLVLATSTFKLNFELGIITAASINAALILDFLLLPLLLLMFDREKSSATDLPTTSFRVQKN
SIO_010081: FLM44_RS04435
subclass of: SO_0000673
so part of: FLM44_RS04435
location: 62..2389
location: region:62-2389:1
so has part: feature:62-2389:1:exon

WP_142046803.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:62-2389:1:exon

FLM44_RS04440
type: Gene
subclass of: SO_0000704
RO_0002162: 43657
locus tag: FLM44_RS04440
old locus tag: FLM44_25455
so part of: sequence
location: 2419..3234
location: region:2419-3234:1
so has part: feature:2419-3234:1:exon
subclass of: SO_0000010

57360639
type: Gene
SIO_000068: ncbigene

position:2419:1
position: 2419
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3234:1
position: 3234
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2419-3234:1:exon

FLM44_RS04440
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 43657
locus tag: FLM44_RS04440
old locus tag: FLM44_25455
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017790341.1
GO component: GO:0009279 - cell outer membrane [Evidence IEA]
GO process: GO:0044874 - lipoprotein localization to outer membrane [Evidence IEA]; GO:0042953 - lipoprotein transport [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: outer membrane lipoprotein-sorting protein
translation: MATLSYKKVVLTKTALFLAFSSALFTPYASSLTAEQKGLEIAEKVENLDSGWGNAAVSARMILRNSQGEESYRDFRINLLEVEGDGDKGLIIFDSPRDIKGTGLLSYTHALVADEQWLYLPSLKRVKRINSNNKSGPFIGSEFSYEDITSFEVEKFRYKYIRDEEIFGRDAFVQEVYPNYKHSGYKKIVSWIDKERYIPLKNVYYDRKNQLLKTQTFSDYKQYKDQFWRASTQVMENHNSGKVTRIEWSDYKFQIGLTKRNFNISTLKRIK
SIO_010081: FLM44_RS04440
subclass of: SO_0000673
so part of: FLM44_RS04440
location: 2419..3234
location: region:2419-3234:1
so has part: feature:2419-3234:1:exon

WP_142046804.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2419-3234:1:exon

FLM44_RS04445
type: Gene
subclass of: SO_0000704
RO_0002162: 43657
locus tag: FLM44_RS04445
old locus tag: FLM44_25460
pseudo: true
so part of: sequence
location: complement(3311..4260)
location: region:3311-4260:-1
so has part: feature:3311-4260:-1:exon
subclass of: SO_0000010

57360640
type: Gene
SIO_000068: ncbigene

position:3311:-1
position: 3311
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4260:-1
position: 4260
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3311-4260:-1:exon

FLM44_RS04445
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 43657
locus tag: FLM44_RS04445
old locus tag: FLM44_25460
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011497995.1
note: frameshifted; internal stop; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: helix-turn-helix domain-containing protein
SIO_010081: FLM44_RS04445
subclass of: SO_0000673
so part of: FLM44_RS04445
location: complement(3311..4260)
location: region:3311-4260:-1
so has part: feature:3311-4260:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3311-4260:-1:exon

FLM44_RS04450
type: Gene
subclass of: SO_0000704
RO_0002162: 43657
gene: lysS
locus tag: FLM44_RS04450
old locus tag: FLM44_25465
so part of: sequence
location: complement(4508..6391)
location: region:4508-6391:-1
so has part: feature:4508-6391:-1:exon
subclass of: SO_0000010

57360641
type: Gene
SIO_000068: ncbigene

position:4508:-1
position: 4508
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6391:-1
position: 6391
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4508-6391:-1:exon

FLM44_RS04450
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 43657
gene: lysS
locus tag: FLM44_RS04450
old locus tag: FLM44_25465
EC number: 6.1.1.6
inference: COORDINATES: protein motif:HMM:TIGR00467.1
GO component: GO:0017101 - aminoacyl-tRNA synthetase multienzyme complex [Evidence IEA]
GO function: GO:0004824 - lysine-tRNA ligase activity [Evidence IEA]
GO process: GO:0006430 - lysyl-tRNA aminoacylation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: lysine--tRNA ligase
translation: MWMNDIEEALSLQTAQIVNDSKTPSGQVHVGSLRGVLIHDAVTRHLKNDGFNVQFTYGIDDYDPMDGLPHDASDELKNHMGKPLCNIPPPNNSSATDFADHYISDFLEIFDELGVEANIYRMRDMYRSGKFNHAIEIILKNAQTVRDIYRDVSGSVRPSDWYPFQVICENCGKIGTTEVYDYENGEVSYRCRRDLVSWAEGCSHQGRMSPFNGNGKLPWKLEWAAKWFIFGITVEGAGKDHCTKGGSREIACQVLRKVFDKEPPLNIPYEFFLVKGAKMSSSKGVGASARSMVDFLPPEVLRYLMVKSQPKRAVNFSTDLNPMLRTFNEYDSLIRAKQSGLLNDEQKQLMRVVEVSTEPKNFQPVSFQLLVSMLQLPHIEISDEVSRRAGKELSDSDTLHLKRRILAAEYWLKHYASEADRYELQDEIPNSWIELSEVQKLFLSKLLTSIENTEWYEEHLQSSIFDAARCTPISPKLAFASIYKVFLDKDSGPKAGALISYLDRKFVADRLSEVYIADWFSCYDELGESISEFMNSVDEIKQHIEDVMLTPELPFDTKSGKVFDSKSGNFIRVNYTHKEKIFSRLLKLELKNHKEIEDQKCALIDSMTIIASDLRERYGICALIDEA
SIO_010081: FLM44_RS04450
subclass of: SO_0000673
so part of: FLM44_RS04450
location: complement(4508..6391)
location: region:4508-6391:-1
so has part: feature:4508-6391:-1:exon

WP_244951631.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4508-6391:-1:exon

FLM44_RS04455
type: Gene
subclass of: SO_0000704
RO_0002162: 43657
locus tag: FLM44_RS04455
old locus tag: FLM44_25470
so part of: sequence
location: complement(6606..7589)
location: region:6606-7589:-1
so has part: feature:6606-7589:-1:exon
subclass of: SO_0000010

57360642
type: Gene
SIO_000068: ncbigene

position:6606:-1
position: 6606
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7589:-1
position: 7589
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6606-7589:-1:exon

FLM44_RS04455
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 43657
locus tag: FLM44_RS04455
old locus tag: FLM44_25470
EC number: 1.1.1.-
inference: COORDINATES: similar to AA sequence:RefSeq:WP_007661167.1
GO function: GO:0016616 - oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: aldo/keto reductase
translation: MKQRIFGRTNWKISEIGYGMWGIAGGEWGGNEIDDKLQDSCLDRAVELGCNFFDTAWAYGSGSSEQLLGRLLKRHPEKRIYIATKVPPKNDEWPSKSTDKLEDIFPNDHIVEYVNKSLMNLGTGSIDLLQFHVWEDSWAQDTRWQECVKQLKAEGKIKAMGISVNRWEPTNVLETLKTGLIDSVQVIYNIFDQAPEDELFQVCKELNIGVIARVPFDEGTLTGNLTLEPNWPEGDWRHTYFCEENLQNSVERAENLRSALPQGCDMPTTALKFILHHPTVSTVIPGMRQIKHVEANIGVSELEPLSEKELDLLRDHRWDRNPTWWSG
SIO_010081: FLM44_RS04455
subclass of: SO_0000673
so part of: FLM44_RS04455
location: complement(6606..7589)
location: region:6606-7589:-1
so has part: feature:6606-7589:-1:exon

WP_142046805.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:6606-7589:-1:exon

FLM44_RS25720
type: Gene
subclass of: SO_0000704
RO_0002162: 43657
locus tag: FLM44_RS25720
so part of: sequence
location: 8420..8495
location: region:8420-8495:1
so has part: feature:8420-8495:1:exon
subclass of: SO_0000663

58735812
type: Gene
SIO_000068: ncbigene

position:8420:1
position: 8420
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8495:1
position: 8495
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8420-8495:1:exon

FLM44_RS25720
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 43657
locus tag: FLM44_RS25720
product: tRNA-Lys
inference: COORDINATES: profile:tRNAscan-SE:2.0.12
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:8453..8455,aa:Lys,seq:ttt)
SIO_010081: FLM44_RS25720
subclass of: SO_0000673
so part of: FLM44_RS25720
location: 8420..8495
location: region:8420-8495:1
so has part: feature:8420-8495:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:8420-8495:1:exon

FLM44_RS04460
type: Gene
subclass of: SO_0000704
RO_0002162: 43657
locus tag: FLM44_RS04460
old locus tag: FLM44_25475
so part of: sequence
location: complement(9131..9874)
location: region:9131-9874:-1
so has part: feature:9131-9874:-1:exon
subclass of: SO_0000010

57360643
type: Gene
SIO_000068: ncbigene

position:9131:-1
position: 9131
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9874:-1
position: 9874
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9131-9874:-1:exon

FLM44_RS04460
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 43657
locus tag: FLM44_RS04460
old locus tag: FLM44_25475
inference: COORDINATES: protein motif:HMM:NF022645.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: STY4526/YPO1902 family pathogenicity island replication protein
translation: MNLNKKSLYHGTMDRQLQSAQLVASHVLQMLVRGTQWDPELSNMIEVLNSNDNKYLNWLGNMDFEMLNELSARLASRIKIQIDVDSISQCIDEISLESHKREVVENLIKSAAPQPLMQSLFQIRGNAFIDLRKRLCVAKSNGGRPKALSTEEINAVESSWNYFIQRLMNENTYSNGDEAFLIAETIYSIHHQTNLRIVDFYPLLDNRCSCIVDFVDFEKRTFPKLISRNPVTKNPNGLVLAPIKHYL
SIO_010081: FLM44_RS04460
subclass of: SO_0000673
so part of: FLM44_RS04460
location: complement(9131..9874)
location: region:9131-9874:-1
so has part: feature:9131-9874:-1:exon

WP_142046806.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:9131-9874:-1:exon

FLM44_RS26325
type: Gene
subclass of: SO_0000704
RO_0002162: 43657
locus tag: FLM44_RS26325
so part of: sequence
location: complement(9871..9996)
location: region:9871-9996:-1
so has part: feature:9871-9996:-1:exon
subclass of: SO_0000010

80426676
type: Gene
SIO_000068: ncbigene

position:9871:-1
position: 9871
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9996:-1
position: 9996
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9871-9996:-1:exon

FLM44_RS26325
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 43657
locus tag: FLM44_RS26325
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MEAIKLYTTGQQYDGAPINKTQPWAENSQERVKTIAGEVIF
SIO_010081: FLM44_RS26325
subclass of: SO_0000673
so part of: FLM44_RS26325
location: complement(9871..9996)
location: region:9871-9996:-1
so has part: feature:9871-9996:-1:exon

WP_280525733.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:9871-9996:-1:exon

FLM44_RS04465
type: Gene
subclass of: SO_0000704
RO_0002162: 43657
locus tag: FLM44_RS04465
old locus tag: FLM44_25480
so part of: sequence
location: complement(10365..10625)
location: region:10365-10625:-1
so has part: feature:10365-10625:-1:exon
subclass of: SO_0000010

57360644
type: Gene
SIO_000068: ncbigene

position:10365:-1
position: 10365
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:10625:-1
position: 10625
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:10365-10625:-1:exon

FLM44_RS04465
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 43657
locus tag: FLM44_RS04465
old locus tag: FLM44_25480
inference: COORDINATES: protein motif:HMM:NF024252.2
GO function: GO:0003677 - DNA binding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: helix-turn-helix transcriptional regulator
translation: MMQRQIVGNDIKNMRLNARYSQQRIADVIDVTRGTYRNYESDRYGISLSDFIKLAHECDLDLEPVFQQIDTINENVKKLCIQRIKK
SIO_010081: FLM44_RS04465
subclass of: SO_0000673
so part of: FLM44_RS04465
location: complement(10365..10625)
location: region:10365-10625:-1
so has part: feature:10365-10625:-1:exon

WP_142046807.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:10365-10625:-1:exon

FLM44_RS04470
type: Gene
subclass of: SO_0000704
RO_0002162: 43657
locus tag: FLM44_RS04470
old locus tag: FLM44_25485
so part of: sequence
location: complement(11443..12501)
location: region:11443-12501:-1
so has part: feature:11443-12501:-1:exon
subclass of: SO_0000010

57360645
type: Gene
SIO_000068: ncbigene

position:11443:-1
position: 11443
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:12501:-1
position: 12501
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11443-12501:-1:exon

FLM44_RS04470
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 43657
locus tag: FLM44_RS04470
old locus tag: FLM44_25485
inference: COORDINATES: similar to AA sequence:RefSeq:WP_003487959.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: PDDEXK nuclease domain-containing protein
translation: MSEKNIRFLTPANSEEYSTWLENLKTEVRQSQQKASLSVNSELINLYWSIGRQLTEKSKISSWGSKVLEQLAIDLKSSFPKMKGLSLTNLKYMRSFAEAWPDFEIGQQLVDQIPWGHNIALIQQISCSEERLWYVKKTIEHGWSRAVLLNQIESKLYLRQGKAVNNFKDTLPKPSSELAVQTLKDPYNFDFLGLTEEAKEADIESALIKHISAFLLELGSGFALVGQQYNLTVGGDDFFIDLLFYHLKLRCYIVIEIKADKLTPKDVGQLDFYLAAVDGELKRDDDAPTIGLLLCKQRNRVVAEYAVRNKNSPIGIAEYTLSEALPKELQGSLPPIEQLESMLTRGLSLTER
SIO_010081: FLM44_RS04470
subclass of: SO_0000673
so part of: FLM44_RS04470
location: complement(11443..12501)
location: region:11443-12501:-1
so has part: feature:11443-12501:-1:exon

WP_142046808.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:11443-12501:-1:exon

FLM44_RS04475
type: Gene
subclass of: SO_0000704
RO_0002162: 43657
locus tag: FLM44_RS04475
old locus tag: FLM44_25490
so part of: sequence
location: 14666..15802
location: region:14666-15802:1
so has part: feature:14666-15802:1:exon
subclass of: SO_0000010

57360646
type: Gene
SIO_000068: ncbigene

position:14666:1
position: 14666
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:15802:1
position: 15802
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:14666-15802:1:exon

FLM44_RS04475
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 43657
locus tag: FLM44_RS04475
old locus tag: FLM44_25490
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: replication protein A
translation: MKSVSLNNLPSSVRRDIEHIETAQQVQQLSLFVESKIANAGLRSSISNTFVGYDLWSRFIRHKREQVPVSAANNKVIISRKVSEKIDNVLYDGVLDISPALIKGKDADFLAWPSDREEKVERALIRLGAQGKIVKISGRVGERYAIVFTLRELQTELKSVSQTLSVSEIKESLMILKGAELSMRYREVDGDSESYSESSMNYISSIHFSGSSGKSTVKCIAFLNEVMSQQIEGLTYRSYYFDRVQSFKRSLSRWLALRLYQVFRYAATGKTYHFMLVNMSIKFGSITSEEEVADRLTAIRRDMTQTMKDFIESDIIESYTIENVKDNNGVIVDYKYEINPTEKFCAEVLNLNKQHRTRIAKAEAALEELTLGEQSEKL
SIO_010081: FLM44_RS04475
subclass of: SO_0000673
so part of: FLM44_RS04475
location: 14666..15802
location: region:14666-15802:1
so has part: feature:14666-15802:1:exon

WP_142046809.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:14666-15802:1:exon

FLM44_RS04480
type: Gene
subclass of: SO_0000704
RO_0002162: 43657
locus tag: FLM44_RS04480
old locus tag: FLM44_25495
so part of: sequence
location: complement(16200..16403)
location: region:16200-16403:-1
so has part: feature:16200-16403:-1:exon
subclass of: SO_0000010

57360647
type: Gene
SIO_000068: ncbigene

position:16200:-1
position: 16200
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:16403:-1
position: 16403
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:16200-16403:-1:exon

FLM44_RS04480
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 43657
locus tag: FLM44_RS04480
old locus tag: FLM44_25495
inference: COORDINATES: protein motif:HMM:NF025063.2
GO process: GO:0015074 - DNA integration [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: integrase core domain-containing protein
translation: MRKGKRTETQIVYMIKAAVETNLLDLYLFESLQQIRDITDEWLDIYNYEWSHGALGAQTLMAYLGSA
SIO_010081: FLM44_RS04480
subclass of: SO_0000673
so part of: FLM44_RS04480
location: complement(16200..16403)
location: region:16200-16403:-1
so has part: feature:16200-16403:-1:exon

WP_142046810.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:16200-16403:-1:exon

FLM44_RS04485
type: Gene
subclass of: SO_0000704
RO_0002162: 43657
locus tag: FLM44_RS04485
old locus tag: FLM44_25500
so part of: sequence
location: 16860..18038
location: region:16860-18038:1
so has part: feature:16860-18038:1:exon
subclass of: SO_0000010

57360648
type: Gene
SIO_000068: ncbigene

position:16860:1
position: 16860
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:18038:1
position: 18038
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:16860-18038:1:exon

FLM44_RS04485
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 43657
locus tag: FLM44_RS04485
old locus tag: FLM44_25500
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MNTLKKICLCSLLALPTFTQAIEISGKVGAQSRFFSDDDKFQNSVLVEPELYWSDEDRYNSFTFKLFARYDDLDDERTHIDIREAMWLHVGDNWELRAGIGKVFWGVTESNHLVDIINQTDLVESIDGEEKLGQALLQGTILRDWGELSAFVLPGFRERTFPGVDGRLRGHFLVDTNDALYESSDKRDHFDYALKYNNSIDVYDIGLSWFKGTNREPKMVFKAQQNQVHQTSAIPLYYQIQQFGIDMQATTGDWLWKLEAIHRDDSMADFGAFSVGFEYTMVGFWDATDLGLLMEYNRDSRNEMSSSLLQNDIFVGARLALNDVQSSELLIGYTQDLTESSSRTAFIEGSRRLGESWKFTLDVRLFTSDEITMPLYGIRNDDYGSVTLEYYF
SIO_010081: FLM44_RS04485
subclass of: SO_0000673
so part of: FLM44_RS04485
location: 16860..18038
location: region:16860-18038:1
so has part: feature:16860-18038:1:exon

WP_142046811.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:16860-18038:1:exon

FLM44_RS04490
type: Gene
subclass of: SO_0000704
RO_0002162: 43657
locus tag: FLM44_RS04490
old locus tag: FLM44_25505
so part of: sequence
location: complement(19121..19318)
location: region:19121-19318:-1
so has part: feature:19121-19318:-1:exon
subclass of: SO_0000010

57360649
type: Gene
SIO_000068: ncbigene

position:19121:-1
position: 19121
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:19318:-1
position: 19318
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:19121-19318:-1:exon

FLM44_RS04490
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 43657
locus tag: FLM44_RS04490
old locus tag: FLM44_25505
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MRNDEVVRQYSSCSPNKVALNYLSALLYIDGTAAVCNLNTERYQVQCDNKQEPNLIQLKRSDASM
SIO_010081: FLM44_RS04490
subclass of: SO_0000673
so part of: FLM44_RS04490
location: complement(19121..19318)
location: region:19121-19318:-1
so has part: feature:19121-19318:-1:exon

WP_142046812.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:19121-19318:-1:exon

FLM44_RS04495
type: Gene
subclass of: SO_0000704
RO_0002162: 43657
locus tag: FLM44_RS04495
old locus tag: FLM44_25510
so part of: sequence
location: complement(19962..20951)
location: region:19962-20951:-1
so has part: feature:19962-20951:-1:exon
subclass of: SO_0000010

57360650
type: Gene
SIO_000068: ncbigene

position:19962:-1
position: 19962
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:20951:-1
position: 20951
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:19962-20951:-1:exon

FLM44_RS04495
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 43657
locus tag: FLM44_RS04495
old locus tag: FLM44_25510
inference: COORDINATES: protein motif:HMM:TIGR00180.1
GO function: GO:0003677 - DNA binding [Evidence IEA]
GO process: GO:0007059 - chromosome segregation [Evidence IEA]; GO:0000910 - cytokinesis [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ParB/RepB/Spo0J family partition protein
translation: MKKRSNNASSLFDKLKANSPEAAKPAYEAKNEKAVVNPVVGLAIGERKVPASSEQIAILKLTHDQIRLFKYHDRHTASLNTEDFEKLKNSIKNNGQHTPGFVRKTKDTTEDGRVIYELVSGRMRFEATRELNVFKAFLLKLDDTQAVELMLSENAERRNITPFERYMSIVPILKDGIMKQVELAAKIEWDKGNLSKAAKSIDFYLNLKLERFIDDPHKVKLNTFLSLHQLYVSQPEITAVTIDDIAESKPNLKNGAFFQAVSKAAKKVVEPNESKSQQKHVVSLPGCKATIDSKNGQFSISFSALPSFDDLTKLANSLKKSGNLKPNVE
SIO_010081: FLM44_RS04495
subclass of: SO_0000673
so part of: FLM44_RS04495
location: complement(19962..20951)
location: region:19962-20951:-1
so has part: feature:19962-20951:-1:exon

WP_142046813.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:19962-20951:-1:exon

FLM44_RS04500
type: Gene
subclass of: SO_0000704
RO_0002162: 43657
locus tag: FLM44_RS04500
old locus tag: FLM44_25515
so part of: sequence
location: complement(20938..22089)
location: region:20938-22089:-1
so has part: feature:20938-22089:-1:exon
subclass of: SO_0000010

57360651
type: Gene
SIO_000068: ncbigene

position:20938:-1
position: 20938
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:22089:-1
position: 22089
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:20938-22089:-1:exon

FLM44_RS04500
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 43657
locus tag: FLM44_RS04500
old locus tag: FLM44_25515
inference: COORDINATES: similar to AA sequence:RefSeq:WP_007992394.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: AAA family ATPase
translation: MENTLKQVTDAMDTLIRTAISEGVAPNERKVMRRYNTSQTCKMLGKSTTTLYKCEEKGVIDKPDVDGNGRRIGYSLDDIAKLREYFGTKPTFSPKSFQGRLGITVALYNFKGGVGKSTTAVCMAQHLAILGHKVLLIDMDSQASATAMFGYMPDIDIDADDTVLPYTLYNEQFSLNYAIRETHIANLHLIPANQQLSSSEFEALPQVSGGTRDEALNYFHKLQSGIDTIKDQFDFVIVDAPPSLGIVGIQTLLSVDNIIIPCPARMLDFVSTRQFLETATEYIKRISEKKTFNSVKVMVSMFNQQNTKMKSFVDIMELVLGEHMYENKMLMSESIDDTFSYFKTPFELAKVKDSDKRIIHNMRMLFGEICTDLVAKGVKNEEA
SIO_010081: FLM44_RS04500
subclass of: SO_0000673
so part of: FLM44_RS04500
location: complement(20938..22089)
location: region:20938-22089:-1
so has part: feature:20938-22089:-1:exon

WP_244951632.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:20938-22089:-1:exon

FLM44_RS04505
type: Gene
subclass of: SO_0000704
RO_0002162: 43657
locus tag: FLM44_RS04505
old locus tag: FLM44_25520
so part of: sequence
location: complement(23004..23138)
location: region:23004-23138:-1
so has part: feature:23004-23138:-1:exon
subclass of: SO_0000010

57360652
type: Gene
SIO_000068: ncbigene

position:23004:-1
position: 23004
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:23138:-1
position: 23138
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:23004-23138:-1:exon

FLM44_RS04505
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 43657
locus tag: FLM44_RS04505
old locus tag: FLM44_25520
inference: COORDINATES: protein motif:HMM:NF025063.2
GO process: GO:0015074 - DNA integration [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: integrase core domain-containing protein
translation: MDLYLFEPLQQVRDIPDEWLDIYNYERPHHALGDQTPMGYLEAA
SIO_010081: FLM44_RS04505
subclass of: SO_0000673
so part of: FLM44_RS04505
location: complement(23004..23138)
location: region:23004-23138:-1
so has part: feature:23004-23138:-1:exon

WP_142046814.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:23004-23138:-1:exon

FLM44_RS04510
type: Gene
subclass of: SO_0000704
RO_0002162: 43657
locus tag: FLM44_RS04510
old locus tag: FLM44_25525
so part of: sequence
location: complement(23218..23529)
location: region:23218-23529:-1
so has part: feature:23218-23529:-1:exon
subclass of: SO_0000010

57360653
type: Gene
SIO_000068: ncbigene

position:23218:-1
position: 23218
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:23529:-1
position: 23529
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:23218-23529:-1:exon

FLM44_RS04510
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 43657
locus tag: FLM44_RS04510
old locus tag: FLM44_25525
inference: COORDINATES: protein motif:HMM:NF012870.2
GO process: GO:0015074 - DNA integration [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DDE-type integrase/transposase/recombinase
translation: MLKLNLKRKGKRRVPTRTPKPLSAPGKHNESWSMDFMSDALNYGHRYRTLNVLDGYNRQALAIEVDTSLTADRVLEKVIAWRGKPKQIRVDNGPEFTSNALES
SIO_010081: FLM44_RS04510
subclass of: SO_0000673
so part of: FLM44_RS04510
location: complement(23218..23529)
location: region:23218-23529:-1
so has part: feature:23218-23529:-1:exon

WP_142046815.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:23218-23529:-1:exon

FLM44_RS04515
type: Gene
subclass of: SO_0000704
RO_0002162: 43657
locus tag: FLM44_RS04515
old locus tag: FLM44_25530
so part of: sequence
location: 24283..25179
location: region:24283-25179:1
so has part: feature:24283-25179:1:exon
subclass of: SO_0000010

57360654
type: Gene
SIO_000068: ncbigene

position:24283:1
position: 24283
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:25179:1
position: 25179
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:24283-25179:1:exon

FLM44_RS04515
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 43657
locus tag: FLM44_RS04515
old locus tag: FLM44_25530
inference: COORDINATES: protein motif:HMM:NF017300.2
GO component: GO:0005737 - cytoplasm [Evidence IEA]
GO function: GO:0003677 - DNA binding [Evidence IEA]
GO process: GO:0006274 - DNA replication termination [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DNA replication terminus site-binding protein
translation: MQRSDVIHKIRLDLRYIKDHINQVSEVLQSATLMSDSGVYTLPSLSGNDIAQELAHIEPVMLTGQAALYQFATHSINFILREKHPGVMAHRLPGCLCFKTEHESELRERITLVNRLKSEFDQFIQLHAGNNTDERFETVSQAVPFLIRKAAARNVLMAPSNTFSVSFSWSHSTSRSAVKPRSYWYEKLDRTLVATQSDVNAEGWAQAIAQEKRALANANDTELFQVIRPLRVTPINNIKFNRVADGTHRKTTMVAHSPILVFNDEPKISTMKPYHGARIKKREVEPIIERLHLYKAKS
SIO_010081: FLM44_RS04515
subclass of: SO_0000673
so part of: FLM44_RS04515
location: 24283..25179
location: region:24283-25179:1
so has part: feature:24283-25179:1:exon

WP_142046816.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:24283-25179:1:exon

FLM44_RS04520
type: Gene
subclass of: SO_0000704
RO_0002162: 43657
locus tag: FLM44_RS04520
old locus tag: FLM44_25535
so part of: sequence
location: complement(25766..26785)
location: region:25766-26785:-1
so has part: feature:25766-26785:-1:exon
subclass of: SO_0000010

57360655
type: Gene
SIO_000068: ncbigene

position:25766:-1
position: 25766
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:26785:-1
position: 26785
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:25766-26785:-1:exon

FLM44_RS04520
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 43657
locus tag: FLM44_RS04520
old locus tag: FLM44_25535
inference: COORDINATES: protein motif:HMM:NF012798.2
GO function: GO:0003677 - DNA binding [Evidence IEA]
GO process: GO:0015074 - DNA integration [Evidence IEA]; GO:0006310 - DNA recombination [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: site-specific integrase
translation: MYDRLSHLIRMTPPEVTGNHLIVHQHSTMTDLIIRDNSCPMYTYINGLSSDTSKATARRVLKAIAKSLGAPSIYRIDWTLVSKNDVNSMLNLWQKKKLAPDTISLYLSVLKSVIKEAFLLELISTRRFESIKSVSKPAGSRIKEHHILTPESFESLLELVKHRKQPESTAIRDQTIFHVLVGAGLRRFEIAGLQCEDVDHENKRLKFIGKGNKERAVKVHELTYQAICQWLNLHPTKTGPLFIRLTKGGFVYYKMSDIQALSGNAIYDVCKKYGLLEGKERVPPHSLRRSYATWLYNNDSNLKNISKLLGHASTKTTERYVQTSQQEIDDTVTNNLFKR
SIO_010081: FLM44_RS04520
subclass of: SO_0000673
so part of: FLM44_RS04520
location: complement(25766..26785)
location: region:25766-26785:-1
so has part: feature:25766-26785:-1:exon

WP_142046817.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:25766-26785:-1:exon

FLM44_RS04525
type: Gene
subclass of: SO_0000704
RO_0002162: 43657
locus tag: FLM44_RS04525
old locus tag: FLM44_25540
so part of: sequence
location: 29039..29332
location: region:29039-29332:1
so has part: feature:29039-29332:1:exon
subclass of: SO_0000010

57360656
type: Gene
SIO_000068: ncbigene

position:29039:1
position: 29039
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:29332:1
position: 29332
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:29039-29332:1:exon

FLM44_RS04525
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 43657
locus tag: FLM44_RS04525
old locus tag: FLM44_25540
inference: COORDINATES: protein motif:HMM:NF024949.2
GO function: GO:0003677 - DNA binding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: helix-turn-helix transcriptional regulator
translation: MKNESPQRIYGDELKALRLTAGLSVEQLAKKFGVTPKSVQNYENDVSKIPTEHFLTLLQLSNLNLNPIFSHIRRLKAAIDYASVQRVSKRKKKIAHE
SIO_010081: FLM44_RS04525
subclass of: SO_0000673
so part of: FLM44_RS04525
location: 29039..29332
location: region:29039-29332:1
so has part: feature:29039-29332:1:exon

WP_185843486.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:29039-29332:1:exon

FLM44_RS04530
type: Gene
subclass of: SO_0000704
RO_0002162: 43657
locus tag: FLM44_RS04530
old locus tag: FLM44_25545
so part of: sequence
location: 29500..30168
location: region:29500-30168:1
so has part: feature:29500-30168:1:exon
subclass of: SO_0000010

57360657
type: Gene
SIO_000068: ncbigene

position:29500:1
position: 29500
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:30168:1
position: 30168
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:29500-30168:1:exon

FLM44_RS04530
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 43657
locus tag: FLM44_RS04530
old locus tag: FLM44_25545
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MKPSSIVLIFTFVLISLGVMFANHYTYDIYMTIFLIGMMIEKRKDINILHICVVTFFVFLIEHISYDYVFPTFIAYELPRIWVEVIYKVSILPLLCLLIGLYAYRPQLSRLYCIKTNNYEAHEKVNRTMAEAPLVGITVVTLIFYLALLVETLLRLVAPMVLSPEIANLFKNWDLLNSNIEYVAFPLQAISLGLIFALVFGGTKYNIEELQREFESKEANRT
SIO_010081: FLM44_RS04530
subclass of: SO_0000673
so part of: FLM44_RS04530
location: 29500..30168
location: region:29500-30168:1
so has part: feature:29500-30168:1:exon

WP_142046819.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:29500-30168:1:exon

FLM44_RS04535
type: Gene
subclass of: SO_0000704
RO_0002162: 43657
gene: msrB
locus tag: FLM44_RS04535
old locus tag: FLM44_25550
so part of: sequence
location: 31274..31720
location: region:31274-31720:1
so has part: feature:31274-31720:1:exon
subclass of: SO_0000010

57360658
type: Gene
SIO_000068: ncbigene

position:31274:1
position: 31274
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:31720:1
position: 31720
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:31274-31720:1:exon

FLM44_RS04535
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 43657
gene: msrB
locus tag: FLM44_RS04535
old locus tag: FLM44_25550
EC number: 1.8.4.12
inference: COORDINATES: similar to AA sequence:RefSeq:WP_019964963.1
GO function: GO:0033743 - peptide-methionine (R)-S-oxide reductase activity [Evidence IEA]
GO process: GO:0030091 - protein repair [Evidence IEA]; GO:0006979 - response to oxidative stress [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: peptide-methionine (R)-S-oxide reductase MsrB
translation: MKSYDRSPKAISELTDEQFRVTQKNGTERPGTGKYLHNKEPGIYVDLVSGEPLFSSSDKYESGCGWPSFTKPIVNSNINEVRDSSHGIIRTEVRSSQGDCHLGHVFTDGPQDKGGLRYCINSASLKFVHLDEMEEMGYGEYISQVENI
SIO_010081: FLM44_RS04535
subclass of: SO_0000673
so part of: FLM44_RS04535
location: 31274..31720
location: region:31274-31720:1
so has part: feature:31274-31720:1:exon

WP_142046820.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:31274-31720:1:exon

FLM44_RS04540
type: Gene
subclass of: SO_0000704
RO_0002162: 43657
gene: msrA
locus tag: FLM44_RS04540
old locus tag: FLM44_25555
so part of: sequence
location: 31720..32220
location: region:31720-32220:1
so has part: feature:31720-32220:1:exon
subclass of: SO_0000010

57360659
type: Gene
SIO_000068: ncbigene

position:32220:1
position: 32220
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:31720-32220:1:exon

FLM44_RS04540
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 43657
gene: msrA
locus tag: FLM44_RS04540
old locus tag: FLM44_25555
EC number: 1.8.4.11
inference: COORDINATES: similar to AA sequence:RefSeq:WP_007616663.1
GO function: GO:0033744 - L-methionine:thioredoxin-disulfide S-oxidoreductase activity [Evidence IEA]; GO:0008113 - peptide-methionine (S)-S-oxide reductase activity [Evidence IEA]
GO process: GO:0030091 - protein repair [Evidence IEA]; GO:0006979 - response to oxidative stress [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: peptide-methionine (S)-S-oxide reductase MsrA
translation: MPNERAVLAGGCFWGMQELIRKLPGVLSTQVGYTGGKEPNATYRNHGNHAEGIEVIFDNRVISYRKILEYFFQIHDPTTELRQGNDLGSSYRSAIYYVSTEQHEEALRTIKDVNESGLWPGPVVTEVEPCGDFWLAEPEHQDYLQRIPNGYTCHYPRKNWVLPTSN
SIO_010081: FLM44_RS04540
subclass of: SO_0000673
so part of: FLM44_RS04540
location: 31720..32220
location: region:31720-32220:1
so has part: feature:31720-32220:1:exon

WP_142046821.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:31720-32220:1:exon

FLM44_RS04545
type: Gene
subclass of: SO_0000704
RO_0002162: 43657
locus tag: FLM44_RS04545
old locus tag: FLM44_25560
so part of: sequence
location: 33071..33502
location: region:33071-33502:1
so has part: feature:33071-33502:1:exon
subclass of: SO_0000010

57360660
type: Gene
SIO_000068: ncbigene

position:33071:1
position: 33071
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:33502:1
position: 33502
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:33071-33502:1:exon

FLM44_RS04545
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 43657
locus tag: FLM44_RS04545
old locus tag: FLM44_25560
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MVETNQSVLETKSLNDFEICKLIADLKSLNTYKQSGQVRVVVENGEDYYFNPIENETQALSLVLEFKVLRGYEPYDLLGFHWYIHDAHNKVHILEYDYNRVNKRISPQKAICLAIVGAYYGKIDNVGEIESLVRTTRYVLPTA
SIO_010081: FLM44_RS04545
subclass of: SO_0000673
so part of: FLM44_RS04545
location: 33071..33502
location: region:33071-33502:1
so has part: feature:33071-33502:1:exon

WP_142046822.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:33071-33502:1:exon

FLM44_RS04550
type: Gene
subclass of: SO_0000704
RO_0002162: 43657
locus tag: FLM44_RS04550
old locus tag: FLM44_25565
so part of: sequence
location: complement(33819..34307)
location: region:33819-34307:-1
so has part: feature:33819-34307:-1:exon
subclass of: SO_0000010

57360661
type: Gene
SIO_000068: ncbigene

position:33819:-1
position: 33819
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:34307:-1
position: 34307
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:33819-34307:-1:exon

FLM44_RS04550
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 43657
locus tag: FLM44_RS04550
old locus tag: FLM44_25565
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012154176.1
GO function: GO:0008080 - N-acetyltransferase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: GNAT family N-acetyltransferase
translation: MIFKKIEEIHWNRILEIQDESYREVGTEDLEVLKSKNEASPDTCFVCLSNSDEVLGYLLAHPWGGISPPKLFEPLRNIANHEYLYLHDMAISPLSKGKGIGRAAVSKLLQMAQNKGIKKVSLVAVQGSESFWSIIGFHKVTGIDICSSYGEKAVLMEKVLAI
SIO_010081: FLM44_RS04550
subclass of: SO_0000673
so part of: FLM44_RS04550
location: complement(33819..34307)
location: region:33819-34307:-1
so has part: feature:33819-34307:-1:exon

WP_142046823.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:33819-34307:-1:exon

FLM44_RS04555
type: Gene
subclass of: SO_0000704
RO_0002162: 43657
locus tag: FLM44_RS04555
old locus tag: FLM44_25570
so part of: sequence
location: complement(35303..35914)
location: region:35303-35914:-1
so has part: feature:35303-35914:-1:exon
subclass of: SO_0000010

57360662
type: Gene
SIO_000068: ncbigene

position:35303:-1
position: 35303
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:35914:-1
position: 35914
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:35303-35914:-1:exon

FLM44_RS04555
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 43657
locus tag: FLM44_RS04555
old locus tag: FLM44_25570
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015464743.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: LysE family translocator
translation: MEQYFLYITIAFLTIASPGPAVILSVSNSLKYGFKGSISGILGIAIGTLFIAIISGSSLGQLLANTETAFTVIKYIGTAYLIYLGVKMWRTAASFSLQESDMKNSESARFFEAFSLTLLNPKKIFFFISLFPQFVDPSESYMNQFLVLAASFSALVIIIHCVYSIAAKLVRHKLSSPRGQQIFGKASGGFLVCFGLGLAMSNK
SIO_010081: FLM44_RS04555
subclass of: SO_0000673
so part of: FLM44_RS04555
location: complement(35303..35914)
location: region:35303-35914:-1
so has part: feature:35303-35914:-1:exon

WP_142046824.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:35303-35914:-1:exon

regulatory
type: Feature
subclass of: SO_0000001
RO_0002162: 43657
regulatory class: riboswitch
inference: COORDINATES: nucleotide motif:Rfam:14.4:RF00168
inference: COORDINATES: profile:INFERNAL:1.1.4
note: Lysine riboswitch is most abundant in Firmicutes and Gammaproteobacteria where they are found upstream of a number of genes involved in lysine biosynthesis, transport and catabolism; Derived by automated computational analysis using gene prediction method: cmsearch.
bound moiety: lysine
so part of: sequence
location: 36651..36880
location: region:36651-36880:1
so has part: feature:36651-36880:1:region

position:36651:1
position: 36651
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:36880:1
position: 36880
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:36651-36880:1:region

FLM44_RS04560
type: Gene
subclass of: SO_0000704
RO_0002162: 43657
gene: lysC
locus tag: FLM44_RS04560
old locus tag: FLM44_25575
so part of: sequence
location: 37109..38464
location: region:37109-38464:1
so has part: feature:37109-38464:1:exon
subclass of: SO_0000010

57360663
type: Gene
SIO_000068: ncbigene

position:37109:1
position: 37109
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:38464:1
position: 38464
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:37109-38464:1:exon

FLM44_RS04560
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 43657
gene: lysC
locus tag: FLM44_RS04560
old locus tag: FLM44_25575
EC number: 2.7.2.4
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010371897.1
GO function: GO:0004072 - aspartate kinase activity [Evidence IEA]
GO process: GO:0009089 - lysine biosynthetic process via diaminopimelate [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: lysine-sensitive aspartokinase 3
translation: MRSYVVAKFGGTSVADFDAMVRCAHIVKNNPSIRLVAVSASSGVTNHLVALTQGKLSSDEQSEHLQSILDIQGTILKKLELEDDLKEGFFSTVEKFKLTAMAPDLAINGELQDEMLSYGERLSSYLFTQVLRDLDVESIRFDVRSILRTDSHFGKAQPHLDKTRELAQEHLLPQLDDKVVVTQGFIGSDVSGRTTTLGRGGSDYSAALLAEAIDATAVHIWTDVMGVFSTDPRLCKKASPIDRLSFDEAAEMATFGAKVLHPATLLPANRSGIPVFVGSSRAPKEGGTWIEKKDEEAQMHMPGIRAVTQRKNQILLTVKSPEMLHASGFLARVFTILSKYNISVDLITTSEISVALTLDNAPNTSKPELSEACLNQLRSFCQVSVENDLSLVALIGSEIQLNTTDINLKHVLSEIGIRMICHGASRHNLCFLVKQSESDKVVQRIHAQLFE
SIO_010081: FLM44_RS04560
subclass of: SO_0000673
so part of: FLM44_RS04560
location: 37109..38464
location: region:37109-38464:1
so has part: feature:37109-38464:1:exon

WP_142046825.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:37109-38464:1:exon

regulatory
type: Feature
subclass of: SO_0000001
RO_0002162: 43657
regulatory class: riboswitch
inference: COORDINATES: nucleotide motif:Rfam:14.4:RF00168
inference: COORDINATES: profile:INFERNAL:1.1.4
note: Lysine riboswitch is most abundant in Firmicutes and Gammaproteobacteria where they are found upstream of a number of genes involved in lysine biosynthesis, transport and catabolism; Derived by automated computational analysis using gene prediction method: cmsearch.
bound moiety: lysine
so part of: sequence
location: 39432..39644
location: region:39432-39644:1
so has part: feature:39432-39644:1:region

position:39432:1
position: 39432
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:39644:1
position: 39644
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:39432-39644:1:region

FLM44_RS04565
type: Gene
subclass of: SO_0000704
RO_0002162: 43657
gene: dapA
locus tag: FLM44_RS04565
old locus tag: FLM44_25580
so part of: sequence
location: 39821..40732
location: region:39821-40732:1
so has part: feature:39821-40732:1:exon
subclass of: SO_0000010

57360664
type: Gene
SIO_000068: ncbigene

position:39821:1
position: 39821
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:40732:1
position: 40732
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:39821-40732:1:exon

FLM44_RS04565
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 43657
gene: dapA
locus tag: FLM44_RS04565
old locus tag: FLM44_25580
EC number: 4.3.3.7
inference: COORDINATES: similar to AA sequence:RefSeq:WP_008127030.1
GO function: GO:0008840 - 4-hydroxy-tetrahydrodipicolinate synthase activity [Evidence IEA]
GO process: GO:0009089 - lysine biosynthetic process via diaminopimelate [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 4-hydroxy-tetrahydrodipicolinate synthase
translation: MNTNSTNTVDYDLSQYPLWTALVTPFDNNDNIDFNNLKILVQQQSSAGNGILLLGSTGEGLALTLEEQKKIVSFVCALSTNVPILVAVGGINLKAQQDWIQYCNKLPIHGYLLGSPLYAKPGTEGLIHWFNTLLDEASLPCMLYNVPGRSAVAIDPKVLSQLSNHPNLWALKEASGDINTFESFRKAAPKLQIYSGDDALMPYFAQAGAKGLVSVAANAWPEKTAEFVRQSLTGIYPNLFNHWSEAIEALFEVANPIPVKILMKEQGRLNHAHLRPPLTEKELLNTAALSAADKTISSWNNTL
SIO_010081: FLM44_RS04565
subclass of: SO_0000673
so part of: FLM44_RS04565
location: 39821..40732
location: region:39821-40732:1
so has part: feature:39821-40732:1:exon

WP_142046826.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:39821-40732:1:exon

FLM44_RS04570
type: Gene
subclass of: SO_0000704
RO_0002162: 43657
locus tag: FLM44_RS04570
old locus tag: FLM44_25585
so part of: sequence
location: complement(41835..42206)
location: region:41835-42206:-1
so has part: feature:41835-42206:-1:exon
subclass of: SO_0000010

57360665
type: Gene
SIO_000068: ncbigene

position:41835:-1
position: 41835
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:42206:-1
position: 42206
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:41835-42206:-1:exon

FLM44_RS04570
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 43657
locus tag: FLM44_RS04570
old locus tag: FLM44_25585
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MMQVDLKKFLNQYCLWLSGVERFMEDGSTHPENEIQCIAKQFQENEINEDEMLTLLSSLSVMRYRFTIKGRIWKPAEESFYSFTAGTYLCFCAECPLPIHENWELKNFVRELYVSFGKAKLIH
SIO_010081: FLM44_RS04570
subclass of: SO_0000673
so part of: FLM44_RS04570
location: complement(41835..42206)
location: region:41835-42206:-1
so has part: feature:41835-42206:-1:exon

WP_185843487.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:41835-42206:-1:exon

FLM44_RS04575
type: Gene
subclass of: SO_0000704
RO_0002162: 43657
locus tag: FLM44_RS04575
old locus tag: FLM44_25590
so part of: sequence
location: 43238..44362
location: region:43238-44362:1
so has part: feature:43238-44362:1:exon
subclass of: SO_0000010

57360666
type: Gene
SIO_000068: ncbigene

position:43238:1
position: 43238
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:44362:1
position: 44362
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:43238-44362:1:exon

FLM44_RS04575
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 43657
locus tag: FLM44_RS04575
old locus tag: FLM44_25590
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MSKNLIIVEPSNKMKKKQRYPSFDCIVKACIECKGDLPLKEMGHSTPDLDSEDETVTWHLSQMLSNKNYKCIFFSESTKAAVIQLFAKTEDIDYSLVQGKTALRVPARNAGHFASTMITNRESNCFTANYIQSPTVGSPIERKVGFVPQDYLIVRRRIEFTARLIVTQRDSSRLFIKHTLFTSYDIAMDASSLQYVTIENIEIQSKPPLTTLTLIQVVSAKLKHQHPVQLEPILDENDVAIYHRTNSTTRSYQAIHSIRVLTVSNGLPLSTTLHTYKNKADTQRDHYPYQSPTTNLYTRDKCAHLMRCIPYKKPNFCGCIAYREDCKNLCKDDYGKLINPTLLSKENRGYVYGRKVFNCASISFLTAKFMHLIE
SIO_010081: FLM44_RS04575
subclass of: SO_0000673
so part of: FLM44_RS04575
location: 43238..44362
location: region:43238-44362:1
so has part: feature:43238-44362:1:exon

WP_142046828.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:43238-44362:1:exon

FLM44_RS04580
type: Gene
subclass of: SO_0000704
RO_0002162: 43657
gene: repA
locus tag: FLM44_RS04580
old locus tag: FLM44_25595
so part of: sequence
location: 44370..45254
location: region:44370-45254:1
so has part: feature:44370-45254:1:exon
subclass of: SO_0000010

57360667
type: Gene
SIO_000068: ncbigene

position:44370:1
position: 44370
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:45254:1
position: 45254
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:44370-45254:1:exon

FLM44_RS04580
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 43657
gene: repA
locus tag: FLM44_RS04580
old locus tag: FLM44_25595
inference: COORDINATES: protein motif:HMM:NF040977.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: plasmid replication initiator RepA
translation: MPLCLNSHPISVRPANWKKLPGELGQTANKCAKRDVSRDVHFVLLRDAVGRKNDFRSARRRLLNAFFQEALNRVDLATDTLTINISEMAQALSKTLKTVVDTETGEESSRIVDAKVPECRIARLVNEVIIPFGLAYVVGGNEDNPQFGKMWDKTHGIWFPKILVLTDTFYRIAGANMEKLHAQREQHQEYRNIGLTTEGSEESVISVRHARETIRRRMFKAAWEKRKRHSARTRLTEKLEGMSFDDAKYEITKRALSSMSESERIEVLPEELNSRVFQILYDHNIYPPNTPPSH
SIO_010081: FLM44_RS04580
subclass of: SO_0000673
so part of: FLM44_RS04580
location: 44370..45254
location: region:44370-45254:1
so has part: feature:44370-45254:1:exon

WP_142046829.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:44370-45254:1:exon

FLM44_RS04585
type: Gene
subclass of: SO_0000704
RO_0002162: 43657
locus tag: FLM44_RS04585
old locus tag: FLM44_25600
so part of: sequence
location: 46020..46463
location: region:46020-46463:1
so has part: feature:46020-46463:1:exon
subclass of: SO_0000010

57360668
type: Gene
SIO_000068: ncbigene

position:46020:1
position: 46020
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:46463:1
position: 46463
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:46020-46463:1:exon

FLM44_RS04585
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 43657
locus tag: FLM44_RS04585
old locus tag: FLM44_25600
inference: COORDINATES: protein motif:HMM:NF024242.2
GO function: GO:0003700 - DNA-binding transcription factor activity [Evidence IEA]; GO:0043565 - sequence-specific DNA binding [Evidence IEA]
GO process: GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: helix-turn-helix transcriptional regulator
translation: MEAKMETTMETEKIIDRLINEVKVKFSDNAFLIKVYSIMINKFKRSRYISFNVSEISSCLFISERSLYRRLKEQGTTYFKIKDEIRKRYSIHLLSSKNYTIKKISKLLYFRSTSAFIYRFKSWYGCTPKKWEEGLELLHDKNECIKP
SIO_010081: FLM44_RS04585
subclass of: SO_0000673
so part of: FLM44_RS04585
location: 46020..46463
location: region:46020-46463:1
so has part: feature:46020-46463:1:exon

WP_142046830.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:46020-46463:1:exon

FLM44_RS26150
type: Gene
subclass of: SO_0000704
RO_0002162: 43657
locus tag: FLM44_RS26150
pseudo: true
so part of: sequence
location: <47496..47639
location: region:47496-47639:1
so has part: feature:47496-47639:1:exon
subclass of: SO_0000010

71771776
type: Gene
SIO_000068: ncbigene

position:47496:1
position: 47496
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

position:47639:1
position: 47639
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:47496-47639:1:exon

FLM44_RS26150
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 43657
locus tag: FLM44_RS26150
inference: COORDINATES: similar to AA sequence:RefSeq:WP_076611593.1
note: incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: IS3 family transposase
SIO_010081: FLM44_RS26150
subclass of: SO_0000673
so part of: FLM44_RS26150
location: <47496..47639
location: region:47496-47639:1
so has part: feature:47496-47639:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:47496-47639:1:exon

FLM44_RS04600
type: Gene
subclass of: SO_0000704
RO_0002162: 43657
locus tag: FLM44_RS04600
old locus tag: FLM44_25615
so part of: sequence
location: complement(48254..48643)
location: region:48254-48643:-1
so has part: feature:48254-48643:-1:exon
subclass of: SO_0000010

57360671
type: Gene
SIO_000068: ncbigene

position:48254:-1
position: 48254
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:48643:-1
position: 48643
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:48254-48643:-1:exon

FLM44_RS04600
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 43657
locus tag: FLM44_RS04600
old locus tag: FLM44_25615
inference: COORDINATES: protein motif:HMM:NF024954.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: helix-turn-helix domain-containing protein
translation: MRTRLLALAHFFEGKSRYQISDYLKVSRTSVNKWVQAYLNHGLEGLEEQPRSGRPCKLDEAQLNQLKVFVHDPMNHPERSRLTLEDVQQYIALQFNTEYELSAVHRLLKRLNVSFISRRSIHSKGDKAA
SIO_010081: FLM44_RS04600
subclass of: SO_0000673
so part of: FLM44_RS04600
location: complement(48254..48643)
location: region:48254-48643:-1
so has part: feature:48254-48643:-1:exon

WP_142046833.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:48254-48643:-1:exon

FLM44_RS04605
type: Gene
subclass of: SO_0000704
RO_0002162: 43657
locus tag: FLM44_RS04605
old locus tag: FLM44_25620
so part of: sequence
location: complement(49213..52785)
location: region:49213-52785:-1
so has part: feature:49213-52785:-1:exon
subclass of: SO_0000010

57360672
type: Gene
SIO_000068: ncbigene

position:49213:-1
position: 49213
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:52785:-1
position: 52785
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:49213-52785:-1:exon

FLM44_RS04605
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 43657
locus tag: FLM44_RS04605
old locus tag: FLM44_25620
inference: COORDINATES: protein motif:HMM:NF012711.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: non-ribosomal peptide synthetase
translation: MFISEFVDKKAIEINIKKSNNMNWEELEQYMEPAWLLLISMYENFPDDMTVFYSESGRLLSFNCKLELEKSIRDYLRCYRLLKQIPVDANESEMTSSLAAAYLISKRELVEIYGANVNNVKLSFFNFGGGIELIYNESYFDSENLMRLMEKFSKIVEALAGEQEQPLKSIFSELEYNEAKNIECFHRPPVLEKFESNVDIINSIEKIAKKFPDKTALVSETINISYEELLKTYNTVTSKLVSLGVGPGSRIGVCMQNRMNFIISILAVLKAGASFVPLDTKMPQGRIDHIVNDSNLKLVLIDDAATSKQFNTTSVEFSALLDNDQNANQELILLQEAEAYVIYTSGSTGLPKGVSISRRSLAYYTYTAVNEYQITHSDRALQFSSIAFDAMIEEVFPTLLAGATLVLQDRSSSNNINKILEFILKQQVTILNFPSSYWKELIRFNGLKEQLSESVRLVIIGGEAVYYEDLKIWQSNFHNAPELVNTYGPTETTVVTTTYHVPKNIHEVNCTIGRPIPGSKVYIVDGSGNIAPVGALGEIYIGGPGLAKGYLNKKVNRSFVELFSHDKSLGIFYKSGDYGRFLHDGNIEFVGRVDEQVKVGGYRVNLNEIKVVIDSFSSDISDVKVLNIKAENGRANKIVAMIESTTLKAQETLLGYLQAKLPHYMIPYIIILDKFPKTVSGKVDVKGLEKIYIDKTEYEYNDQLSAIENRVAKHWGEILKVPIKDKDMSFFEYGGNSVDTIHMLNKISSEFDIQIANKTFFNKKLSISNVADEISVLTGTSSLIKSINNAANFKGWRAEEARINLELYNYNTMTPKENCGLSVVITGSTGFLGIHLLQELMTNKAVSNIYCLVRGESEQSCIDRVVKASNENNLDVNVKSNKVKFIQSDITKKRLGLSKSLYSQLANSASAIIHCAAAVNIHLDYESLKKTNVDSVREIIDFAHTGMSKKIHYISSLAIFDCSPSLSTVNENTCIDSVNHLQGGYAQSKWVAEKLLMNARDCGMDVNIYRCGRIWGNLQSGKMPKNDFIWKFITGCIEVGYAPKIDITLDVTPACFMSKAIVDLVLSTSGSAGRNFHLANPNVIYLSDIYNHLNNENIPLEIIDYGSWLDDVLRDKCQKDPFHPLSSFEFILGNEDPNYWVDSYFRGKETEEALKLINLTYPVITSQVINNYLKSTGSLNTVEPVPELIE
SIO_010081: FLM44_RS04605
subclass of: SO_0000673
so part of: FLM44_RS04605
location: complement(49213..52785)
location: region:49213-52785:-1
so has part: feature:49213-52785:-1:exon

WP_185843488.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:49213-52785:-1:exon

FLM44_RS04610
type: Gene
subclass of: SO_0000704
RO_0002162: 43657
locus tag: FLM44_RS04610
old locus tag: FLM44_25625
so part of: sequence
location: complement(53032..54750)
location: region:53032-54750:-1
so has part: feature:53032-54750:-1:exon
subclass of: SO_0000010

57360673
type: Gene
SIO_000068: ncbigene

position:53032:-1
position: 53032
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:54750:-1
position: 54750
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:53032-54750:-1:exon

FLM44_RS04610
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 43657
locus tag: FLM44_RS04610
old locus tag: FLM44_25625
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: FHA domain-containing protein
translation: MCIKKNNIDTDFLALGLGGTNMMAMLWTIAMGKKAVGVEMRGDPFLRIHWNIRVDFYHQLGLIDKMMMERYGKEGVPHMDNGKLFSLAECFYSPNTVAGFAVPDEVVTGYDRTHHIAGEIHHVEFIDDRYVNGKPNRILTVLPQPETPREPCGNMIRTNLTEVLDGPSTFQSEANDVLVLLRRYLEGIEILDKETGREPRVQLFTTHRVVEESEGFVRGEDGRISVTFEKLIELDFRGKLRRFKAPDSEPITVNAPELCVIAQGFRSTDAERLGFEQKDVSVDHNDGNGPIVAQADYLAGFIDVLVDGRLRRRIASAFDDEGREYWVRQIAVGHENDPQVGWVLVQIPDFMVFDPVEAGYVSECTDKDSVEYFAAHQRLLYDFYIQESAKILEVPEEELRGIQMAYGPKQFSLIERIGDSPKIAPNVQIAGDSFGNGHFLTSGGAMAGMVGHSMAVLNYWKARAAGVSVEEASDNLAEEIRDCTQSWLDVSAKEFTSFAPINFGADRIQKIADESGIEVDARTKLVDASRRRRHGLSPLDPSDWRRPALRNGRVRTSDLPPLKDEHPDMALV
SIO_010081: FLM44_RS04610
subclass of: SO_0000673
so part of: FLM44_RS04610
location: complement(53032..54750)
location: region:53032-54750:-1
so has part: feature:53032-54750:-1:exon

WP_142046835.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:53032-54750:-1:exon