Ostreococcus lucimarinus CCE9901 chromosome 13, complete sequence.
Eukaryota; Viridiplantae; Chlorophyta; prasinophytes; Mamiellophyceae; Mamiellales; Bathycoccaceae; Ostreococcus.
The tiny eukaryote Ostreococcus provides genomic insights into the paradox of plankton speciation
Submitted (22-JUN-2017) National Center for Biotechnology Information, NIH, Bethesda, MD 20894, USA
Submitted (21-FEB-2007) US DOE Joint Genome Institute, 2800 Mitchell Drive B100, Walnut Creek, CA 94598-1698, USA
PROVISIONAL REFSEQ: This record has not yet been subject to final\nNCBI review. The reference sequence is identical to CP000593.\nURL -- http://www.jgi.doe.gov/ostreococcus\nJGI Project ID: 3436080\nSource DNA was provided by Brian Palenik (bpalenik@ucsd.edu))\nStock culture is available from CCMP (http://ccmp.bigelow.org/) as\nstrain number CCMP2514\nContacts: Brian Palenik (bpalenik@ucsd.edu))\n Igor Grigoriev (ivgrigoriev@lbl.gov)\nAnnotation done by JGI-PGF\nManual curation done by the Ostreococcus User Community\nFinishing done at Stanford/JGI, Stanford Human Genome Center\n(www-shgc.stanford.edu)\nThe finished chromosome has no gaps. The sequence has less than one\nerror in 100,000 bp.A\nThe JGI and collaborators endorse the principles for the\ndistribution and use of large scale sequencing data adopted by the\nlarger genome sequencing community and urge users of this data to\nfollow them. It is our intention to publish the work of this\nproject in a timely fashion and we welcome collaborative\ninteraction on the project and analysis.\n(http://www.genome.gov/page.cfm?pageID=10506376).\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: INSDC submitter\nAnnotation Status :: Full annotation\nAnnotation Pipeline :: Eukaryotic Annotation Propagation Pipeline\n##Genome-Annotation-Data-END##\nCOMPLETENESS: full length.
Plastid ribosomal protein S2 small ribosomal subunit
Chloroplast ribosomal protein S21; Chloroplast small ribosomal subunit protein S21; imported to chloroplast
Plastid ribosomal protein S21 small ribosomal subunit
VIC family transporter: potassium ion channel
VIC family transporter: inwardly rectifying potassium ion channel
ABC(ATP-binding) family transporter: cobalt ion
VIC family transporter: potassium ion channel, potassium voltage-gated channel, subfamily H (Eag-related)
ABC(ABCB) family transporter: mitochondrial ATM1-like protein (ABCB)
peptidyl-prolyl cis-trans isomerase, FKBP-type
FKBP-type peptidyl-prolyl isomerase; probably targetted to nucleus; N-termonal domain rich in acidic residues, like Chlamydomonas orthologue
BASS family transporter: sodium ion/bile acid
Receptor of activated protein kinase C 1A, component of 40S small ribosomal subunit
Recepter of activated protein kinase C 1A; Also cytosolic 40S small ribosomal subunit protein RACK1A; protein is identical in sequence to RACK1B
possible early light inducible or carotene biosynthesis related protein
Eukaryotic translation elongation factor 1 alpha
FKBP-type peptidyl-prolyl isomerase, possibly targetted to thylakoid lumen (TAT pathway)
PPR protein, possibly chloroplast-located
ClpYQ (HslUV)-type protease, ATP-dependent subunit ClpY (HslU)
ClpYQ (HslUV)-type protease, ATP-dependent subunit ClpY (HslU) (AAA+ ATPase superfamily)