Ostreococcus lucimarinus CCE9901 chromosome 12, complete sequence.
Eukaryota; Viridiplantae; Chlorophyta; prasinophytes; Mamiellophyceae; Mamiellales; Bathycoccaceae; Ostreococcus.
The tiny eukaryote Ostreococcus provides genomic insights into the paradox of plankton speciation
Submitted (22-JUN-2017) National Center for Biotechnology Information, NIH, Bethesda, MD 20894, USA
Submitted (21-FEB-2007) US DOE Joint Genome Institute, 2800 Mitchell Drive B100, Walnut Creek, CA 94598-1698, USA
PROVISIONAL REFSEQ: This record has not yet been subject to final\nNCBI review. The reference sequence is identical to CP000592.\nURL -- http://www.jgi.doe.gov/ostreococcus\nJGI Project ID: 3436080\nSource DNA was provided by Brian Palenik (bpalenik@ucsd.edu))\nStock culture is available from CCMP (http://ccmp.bigelow.org/) as\nstrain number CCMP2514\nContacts: Brian Palenik (bpalenik@ucsd.edu))\n Igor Grigoriev (ivgrigoriev@lbl.gov)\nAnnotation done by JGI-PGF\nManual curation done by the Ostreococcus User Community\nFinishing done at Stanford/JGI, Stanford Human Genome Center\n(www-shgc.stanford.edu)\nThe finished chromosome has no gaps. The sequence has less than one\nerror in 100,000 bp.A\nThe JGI and collaborators endorse the principles for the\ndistribution and use of large scale sequencing data adopted by the\nlarger genome sequencing community and urge users of this data to\nfollow them. It is our intention to publish the work of this\nproject in a timely fashion and we welcome collaborative\ninteraction on the project and analysis.\n(http://www.genome.gov/page.cfm?pageID=10506376).\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: INSDC submitter\nAnnotation Status :: Full annotation\nAnnotation Pipeline :: Eukaryotic Annotation Propagation Pipeline\n##Genome-Annotation-Data-END##\nCOMPLETENESS: full length.
ABC(ABCG) family transporter: White protein-like protein (ABCG)
sulfite reductase; chloroplast-localized; catalizes reduction of sulfite into sulfide which will be incorporated into cysteine
MOP(MATE) family transporter: multidrug efflux
CaCA family transporter: sodium ion/potassium ion/calcium ion
putative dihydroorotate dehydrogenase or dihydropryrimidine dehydrogenase; probably mitochondrial
PPR protein, possibly chloroplast-located
putative psbM, PSII-M, photosystem II polypeptide, typically encoded in the chloroplast genome
possible psbY, PSII-Y, photosystem II polypeptide
subunit PetN (subunit VIII) of cytochrome b6f complex; nucleus-encoded precursor; chloroplast targeted
SSS family transporter: sodium ion/pantothenate
Ribosomal protein L26, component of cytosolic 80S ribosome and 60S large subunit
Cytosolic 80S ribosomal protein L26; Cytosolic 60S large ribosomal subunit protein L26
Putative mitochondrial ribosomal protein L27
Putative mitochondrial ribosomal protein L27, imported to mitochondria
Ribosomal protein S25, component of cytosolic 80S ribosome and 40S small subunit
Cytosolic 80S ribosomal protein S25; Cytosolic 40S small ribosomal subunit protein S25
MC family transporter: succinate/fumarate
ABC(membrane) family transporter: toluene tolerance
Ribosomal protein L13a, component of cytosolic 80S ribosome and 60S large subunit
Cytosolic 80S ribosomal protein L13a; Cytosolic 60S large ribosomal subunit protein L13a
CPA2 family transporter: potassium ion efflux
Ribosomal protein L22, component of cytosolic 80S ribosome and 60S large subunit
Cytosolic 80S ribosomal protein L22; Cytosolic 60S large ribosomal subunit protein L22
chaperonin 60 alpha chain, precursor of chloroplast protein (Hsp60)(Rubisco-binding protein); chaperonin/groEL superfamily
DASS family transporter: sodium ion/sulfate
O-acetylserinethiol lyase/cysteine synthase
Putative mitochondrial ribosomal protein S16
Putative mitochondrial ribosomal protein S16, imported to mitochondria
MC family transporter: aspartate/glutamate (Ca2+-activated)