Ostreococcus lucimarinus CCE9901 chromosome 10, complete sequence.
Eukaryota; Viridiplantae; Chlorophyta; prasinophytes; Mamiellophyceae; Mamiellales; Bathycoccaceae; Ostreococcus.
The tiny eukaryote Ostreococcus provides genomic insights into the paradox of plankton speciation
Submitted (22-JUN-2017) National Center for Biotechnology Information, NIH, Bethesda, MD 20894, USA
Submitted (21-FEB-2007) US DOE Joint Genome Institute, 2800 Mitchell Drive B100, Walnut Creek, CA 94598-1698, USA
PROVISIONAL REFSEQ: This record has not yet been subject to final\nNCBI review. The reference sequence is identical to CP000590.\nURL -- http://www.jgi.doe.gov/ostreococcus\nJGI Project ID: 3436080\nSource DNA was provided by Brian Palenik (bpalenik@ucsd.edu))\nStock culture is available from CCMP (http://ccmp.bigelow.org/) as\nstrain number CCMP2514\nContacts: Brian Palenik (bpalenik@ucsd.edu))\n Igor Grigoriev (ivgrigoriev@lbl.gov)\nAnnotation done by JGI-PGF\nManual curation done by the Ostreococcus User Community\nFinishing done at Stanford/JGI, Stanford Human Genome Center\n(www-shgc.stanford.edu)\nThe finished chromosome has no gaps. The sequence has less than one\nerror in 100,000 bp.A\nThe JGI and collaborators endorse the principles for the\ndistribution and use of large scale sequencing data adopted by the\nlarger genome sequencing community and urge users of this data to\nfollow them. It is our intention to publish the work of this\nproject in a timely fashion and we welcome collaborative\ninteraction on the project and analysis.\n(http://www.genome.gov/page.cfm?pageID=10506376).\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: INSDC submitter\nAnnotation Status :: Full annotation\nAnnotation Pipeline :: Eukaryotic Annotation Propagation Pipeline\n##Genome-Annotation-Data-END##\nCOMPLETENESS: full length.
ATP sulfurylase (sulfate adenylyltransferase)
ATP sulfurylase; reduces sulfate to adenylyl-sufate (APS), first step in S assimilation; possibly chloroplast-localized, but an Arabidopsis homologue has been reported to yield a cytosolic isoform
chaperonin 60, precursor of mitochondrial protein (Hsp60)(Rubisco-binding protein); chaperonin/groEL superfamily
molecular chaperone, HSP90 family; No orthologue in Arabidopsis or Chlamydomonas; presequence could direct it to chloroplast or mitochondria: Human orthologue is mitochondrial (PMID: 10652318), Dictyostelium orthologue is found in multiple cell compartments (PMID: 15652353)
MC family transporter: dicarboxylate/tricarboxylate
IISP family transporter: Signal recognition particle 54 kDa protein (SRP54)
MFS family transporter: multidrug efflux
F-ATPase family transporter: protons (vacuolar)
molecular chaperone, HSP90 family; cytosolic
ABC(ABCG) family transporter: White protein-like protein (ABCG)
Chloroplast protein kinase Stt7; required for LHCII phosphorylation and state transition in Chlamydomonas and Arabidopsis
AAA-metalloprotease FtsH, chloroplast precursor
membrane-anchored metalloprotease (M41 family) with a AAA domain; probably acts as a chaperone and a protease; role unknown; probably chloroplastic (by homology)
Ribosomal protein L31, component of cytosolic 80S ribosome and 60S large subunit
Cytosolic 80S ribosomal protein L31; Cytosolic 60S large ribosomal subunit protein L31
ICln family transporter: chloride ion current inducer protein I(Cln)
peptidyl-prolyl cis-trans isomerase, FKBP-type
FKBP-type peptidyl-prolyl isomerase, possibly targetted to thylakoid lumen (TAT pathway)
Glutamine amidotransferase component of anthranilate synthase
P-ATPase family transporter: zinc/lead/cadmium/mercury ion
PPI family transporter: peroxisomal targeting signal type 2 receptor (PEX7)