Takifugu flavidus voucher ECSFRI-JHDFT01 mitochondrion, complete genome.
type: Entry
definition: Takifugu flavidus voucher ECSFRI-JHDFT01 mitochondrion, complete genome.
sequence version: NC_024199.1
sequence date: 2023-04-03
sequence: sequence
division: VRT
label: NC_024199.1
type: RefSeq
SIO_000068: refseq
dblink: PRJNA927338
keyword: RefSeq
source: mitochondrion Takifugu flavidus (sansaifugu)
organism: Takifugu flavidus
taxonomy: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Eupercaria; Tetraodontiformes; Tetradontoidea; Tetraodontidae; Takifugu.
reference: 1
references: 24725057
reference: 2
reference: 3
comment: REVIEWED REFSEQ: This record has been curated by NCBI staff. The\nreference sequence is identical to KJ562276.\nCOMPLETENESS: full length.

sequence
subclass of: SO_0000819
sequence length: 16449
topology: circular
so has quality: SO_0000988
location: 1..16449
location: region:1-16449:1
RO_0002162: 433684

NC_024199
type: RefSeq
SIO_000068: refseq

PRJNA927338
type: BioProject
SIO_000068: bioproject

1
title: The complete mitochondrial genome sequence of Takifugu flavidus (Tetraodontiformes: Tetrodontidae)
author: Liu, Y.
author: Zhou, Q.
author: Liu, H.
author: Li, C.
author: Tong, A.
journal: Mitochondrial DNA (2014) In press
pubmed: 24725057
comments: Publication Status: Available-Online prior to print

24725057
type: PubMed
SIO_000068: pubmed

2
title: Direct Submission
journal: Submitted (29-MAY-2014) National Center for Biotechnology Information, NIH, Bethesda, MD 20894, USA

3
title: Direct Submission
author: Liu, Y.
author: Zhou, Q.
author: Liu, H.
author: Li, C.
author: Tong, A.
journal: Submitted (11-MAR-2014) The Center of Engineering and Technology, Beidaihe Central Experiment Station, Chinese Academy of Fishery Sciences, 7 Jinshanzui Road, Qinhuangdao, Heibei 066100, China

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:16449:1
position: 16449
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-16449:1:source
so part of: sequence
organism: Takifugu flavidus
organelle: mitochondrion
mol type: genomic DNA
specimen voucher: ECSFRI-JHDFT01

433684
type: Taxonomy
SIO_000068: taxonomy

tRNA
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 433684
product: tRNA-Phe
so part of: sequence
location: 1..68
location: region:1-68:1
so has part: feature:1-68:1:region

position:68:1
position: 68
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1-68:1:region

rRNA
type: Ribosomal RNA
subclass of: SO_0000252
RO_0002162: 433684
product: s-rRNA
note: 12S ribosomal RNA
so part of: sequence
location: 69..1015
location: region:69-1015:1
so has part: feature:69-1015:1:region

position:69:1
position: 69
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1015:1
position: 1015
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:69-1015:1:region

tRNA
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 433684
product: tRNA-Val
so part of: sequence
location: 1016..1088
location: region:1016-1088:1
so has part: feature:1016-1088:1:region

position:1016:1
position: 1016
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1088:1
position: 1088
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1016-1088:1:region

rRNA
type: Ribosomal RNA
subclass of: SO_0000252
RO_0002162: 433684
product: l-rRNA
note: 16S ribosomal RNA
so part of: sequence
location: 1089..2756
location: region:1089-2756:1
so has part: feature:1089-2756:1:region

position:1089:1
position: 1089
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2756:1
position: 2756
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1089-2756:1:region

tRNA
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 433684
product: tRNA-Leu
so part of: sequence
location: 2757..2829
location: region:2757-2829:1
so has part: feature:2757-2829:1:region

position:2757:1
position: 2757
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2829:1
position: 2829
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2757-2829:1:region

ND1
type: Gene
subclass of: SO_0000704
RO_0002162: 433684
gene: ND1
so part of: sequence
location: 2830..3804
location: region:2830-3804:1
so has part: feature:2830-3804:1:exon
subclass of: SO_0000010

19524531
type: Gene
SIO_000068: ncbigene

position:2830:1
position: 2830
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3804:1
position: 3804
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2830-3804:1:exon

ND1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 433684
gene: ND1
codon start: 1
transl table: 2
product: NADH dehydrogenase subunit 1
translation: MTTMLITHLIHPLTIIVPVLLAVAFLTLIERKVLGYMQLRKGPNIVGPYGLLQPIADGVKLFIKEPVRPSTSAPILFIIAPTLALTLAMMMWTPMPLPYPILDLNLAILFVLAISSLAVYSILGSGWASNSKYALMGSLRAVAQMISYEVSLGLILLSLIIFTGNFTLQTFNVTQESIWLIIPTWPLAAMWYISTLAETNRAPFDLTEGESELVSGFNVEYAGGPFALFFLAEYANILLMNTLSTILFLGALHMPALPELTSINLMSKTAILSLIFLWARASYPRFRYDQLMHLTWKNFLPLTLAFIIWHLALPTTMAGLPPQM
SIO_010081: ND1
subclass of: SO_0000673
so part of: ND1
location: 2830..3804
location: region:2830-3804:1
so has part: feature:2830-3804:1:exon

YP_009034531.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2830-3804:1:exon

tRNA
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 433684
product: tRNA-Ile
so part of: sequence
location: 3807..3876
location: region:3807-3876:1
so has part: feature:3807-3876:1:region

position:3807:1
position: 3807
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3876:1
position: 3876
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3807-3876:1:region

tRNA
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 433684
product: tRNA-Gln
so part of: sequence
location: complement(3876..3946)
location: region:3876-3946:-1
so has part: feature:3876-3946:-1:region

position:3876:-1
position: 3876
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3946:-1
position: 3946
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3876-3946:-1:region

tRNA
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 433684
product: tRNA-Met
so part of: sequence
location: 3946..4014
location: region:3946-4014:1
so has part: feature:3946-4014:1:region

position:3946:1
position: 3946
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4014:1
position: 4014
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3946-4014:1:region

ND2
type: Gene
subclass of: SO_0000704
RO_0002162: 433684
gene: ND2
so part of: sequence
location: 4015..5060
location: region:4015-5060:1
so has part: feature:4015-5060:1:exon
subclass of: SO_0000010

19524532
type: Gene
SIO_000068: ncbigene

position:4015:1
position: 4015
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5060:1
position: 5060
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4015-5060:1:exon

ND2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 433684
gene: ND2
note: TAA stop codon is completed by the addition of 3' A residues to the mRNA
codon start: 1
transl except: (pos:5059..5060,aa:TERM)
transl table: 2
product: NADH dehydrogenase subunit 2
translation: MNPYITASLLFGLLLGTTITTTSTHWLIAWMGLEINTLAIIPLMAQQHHPRAIEATTKYFLTQAAAAATLLLAATTNAWMTGQWELQQATHPVPTTMITIALALKIGLAPLHTWLPEVMQGLDLTTGLILATWQKIAPFSLLLQIQPNNQTLLILLAILSMLVGGWGGLNQTQVRKILAYSSIAHLGWMVIILQFSPTLAVMTLALYIIMTSSTFLAFMMNKTTTIGTLTISWAKTPIISSLMPLILLSLGGLPPLTGFMPKWLILQELTKQDLGMTATLAALSALLSLYFYLRLSYAMTLTISPNNLTGTLPWRTQTNKKTLPTAILLSSSILLLPLTPEVLTLFNT
SIO_010081: ND2
subclass of: SO_0000673
so part of: ND2
location: 4015..5060
location: region:4015-5060:1
so has part: feature:4015-5060:1:exon

YP_009034532.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4015-5060:1:exon

tRNA
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 433684
product: tRNA-Trp
so part of: sequence
location: 5061..5131
location: region:5061-5131:1
so has part: feature:5061-5131:1:region

position:5061:1
position: 5061
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5131:1
position: 5131
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5061-5131:1:region

tRNA
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 433684
product: tRNA-Ala
so part of: sequence
location: complement(5133..5201)
location: region:5133-5201:-1
so has part: feature:5133-5201:-1:region

position:5133:-1
position: 5133
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5201:-1
position: 5201
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5133-5201:-1:region

tRNA
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 433684
product: tRNA-Asn
so part of: sequence
location: complement(5204..5277)
location: region:5204-5277:-1
so has part: feature:5204-5277:-1:region

position:5204:-1
position: 5204
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5277:-1
position: 5277
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5204-5277:-1:region

tRNA
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 433684
product: tRNA-Cys
so part of: sequence
location: complement(5312..5375)
location: region:5312-5375:-1
so has part: feature:5312-5375:-1:region

position:5312:-1
position: 5312
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5375:-1
position: 5375
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5312-5375:-1:region

tRNA
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 433684
product: tRNA-Tyr
so part of: sequence
location: complement(5375..5444)
location: region:5375-5444:-1
so has part: feature:5375-5444:-1:region

position:5444:-1
position: 5444
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5375-5444:-1:region

COX1
type: Gene
subclass of: SO_0000704
RO_0002162: 433684
gene: COX1
so part of: sequence
location: 5446..7005
location: region:5446-7005:1
so has part: feature:5446-7005:1:exon
subclass of: SO_0000010

19524533
type: Gene
SIO_000068: ncbigene

position:5446:1
position: 5446
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7005:1
position: 7005
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5446-7005:1:exon

COX1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 433684
gene: COX1
codon start: 1
transl table: 2
product: cytochrome c oxidase subunit I
translation: MAITRWFFSTNHKDIGTLYLVFGAWAGMVGTALSLLIRAELSQPGALLGDDQIYNVIVTAHAFVMIFFMVMPIMIGGFGNWLIPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSGVEAGAGTGWTVYPPLAGNLAHAGASVDLTIFSLHLAGVSSILGAINFITTIINMKPPAISQYQTPLFVWAVLITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGMISHIVAYYSGKKEPFGYMGMVWAMMAIGLLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGSIKWETPMLWALGFIFLFTVGGLTGIVLANSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMGAFVHWFPLFSGYTLHSTWTKIHFGVMFIGVNLTFFPQHFLGLAGMPRRYSDYPDAYALWNSVSSIGSMVSLVAVIMFLFILWEAFTAKREVQSVELTMTNVEWLHGCPPPYHTFEEPAFVQTQTSIRE
SIO_010081: COX1
subclass of: SO_0000673
so part of: COX1
location: 5446..7005
location: region:5446-7005:1
so has part: feature:5446-7005:1:exon

YP_009034533.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:5446-7005:1:exon

tRNA
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 433684
product: tRNA-Ser
so part of: sequence
location: complement(6997..7067)
location: region:6997-7067:-1
so has part: feature:6997-7067:-1:region

position:6997:-1
position: 6997
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7067:-1
position: 7067
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6997-7067:-1:region

tRNA
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 433684
product: tRNA-Asp
so part of: sequence
location: 7071..7142
location: region:7071-7142:1
so has part: feature:7071-7142:1:region

position:7071:1
position: 7071
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7142:1
position: 7142
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7071-7142:1:region

COX2
type: Gene
subclass of: SO_0000704
RO_0002162: 433684
gene: COX2
so part of: sequence
location: 7149..7839
location: region:7149-7839:1
so has part: feature:7149-7839:1:exon
subclass of: SO_0000010

19524534
type: Gene
SIO_000068: ncbigene

position:7149:1
position: 7149
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7839:1
position: 7839
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7149-7839:1:exon

COX2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 433684
gene: COX2
note: TAA stop codon is completed by the addition of 3' A residues to the mRNA
codon start: 1
transl except: (pos:7839,aa:TERM)
transl table: 2
product: cytochrome c oxidase subunit II
translation: MAHPSQLGFQDAAQPVMEELLHFHDHALMIVFLISTLVLYIIVAMVSTKLTNKYILDSQEIEIIWTILPAIILILIALPSLRILYLMDEINDPHLTIKAMGHQWYWSYEYTDYSDLAFDSYMVPTQDLAPGQFRLLETDHRMVVPVDSPIRILVSAEDVLHSWAVPSLGVKMDAVPGRLNQTAFILSRPGVFYGQCSEICGANHSFMPIVVEAVPLEHFENWSSLMLEDA
SIO_010081: COX2
subclass of: SO_0000673
so part of: COX2
location: 7149..7839
location: region:7149-7839:1
so has part: feature:7149-7839:1:exon

YP_009034534.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:7149-7839:1:exon

tRNA
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 433684
product: tRNA-Lys
so part of: sequence
location: 7840..7912
location: region:7840-7912:1
so has part: feature:7840-7912:1:region

position:7840:1
position: 7840
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7912:1
position: 7912
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7840-7912:1:region

ATP8
type: Gene
subclass of: SO_0000704
RO_0002162: 433684
gene: ATP8
so part of: sequence
location: 7914..8081
location: region:7914-8081:1
so has part: feature:7914-8081:1:exon
subclass of: SO_0000010

19524535
type: Gene
SIO_000068: ncbigene

position:7914:1
position: 7914
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8081:1
position: 8081
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7914-8081:1:exon

ATP8
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 433684
gene: ATP8
codon start: 1
transl table: 2
product: ATP synthase F0 subunit 8
translation: MPQLNPAPWFLIMVFSWCVFLIFLPPKIMAHLFPNEPSSQNTCPKEIKPWPWSWH
SIO_010081: ATP8
subclass of: SO_0000673
so part of: ATP8
location: 7914..8081
location: region:7914-8081:1
so has part: feature:7914-8081:1:exon

YP_009034535.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:7914-8081:1:exon

ATP6
type: Gene
subclass of: SO_0000704
RO_0002162: 433684
gene: ATP6
so part of: sequence
location: 8072..8755
location: region:8072-8755:1
so has part: feature:8072-8755:1:exon
subclass of: SO_0000010

19524536
type: Gene
SIO_000068: ncbigene

position:8072:1
position: 8072
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8755:1
position: 8755
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8072-8755:1:exon

ATP6
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 433684
gene: ATP6
codon start: 1
transl table: 2
product: ATP synthase F0 subunit 6
translation: MTLSFFDQFLSPTAFGIPLIALALLLPWTLFPTPTNRWTNNRLLTLQSQFINRFTQQLLLPLNMGGHKWALMFASLMVFLITINMLGLLPYTFTPTTQLSVNMALAVPLWLATVIIGMRNNPTAALGHLLPEGTPNALIPILIIIETVSLFIRPLALGVRLTANLTAGHLLIQLIATAAFVLLPLMPTVAILTSTLLFLLTLLEVAVAMIQAYVFVLLLSLYLQENV
SIO_010081: ATP6
subclass of: SO_0000673
so part of: ATP6
location: 8072..8755
location: region:8072-8755:1
so has part: feature:8072-8755:1:exon

YP_009034536.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:8072-8755:1:exon

COX3
type: Gene
subclass of: SO_0000704
RO_0002162: 433684
gene: COX3
so part of: sequence
location: 8755..9543
location: region:8755-9543:1
so has part: feature:8755-9543:1:exon
subclass of: SO_0000010

19524537
type: Gene
SIO_000068: ncbigene

position:9543:1
position: 9543
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8755-9543:1:exon

COX3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 433684
gene: COX3
codon start: 1
transl table: 2
product: cytochrome c oxidase subunit III
translation: MAHQAHPYHMVDPSPWPLTGAVAALLLTSGLAIWFHFNSTILMTLGLVLLLLTMLQWWRDIVREGTFQGHHTPPVQKGLRYGMILFITSEVFFFLGFFWAFYHASLAPTPELGGCWPPTGIIPLNPFEVPLLNTAVLLASGVTVTWAHHSIMEGERKQAIQSLTLTILLGFYFTFLQAMEYYEAPFTIADGVYGSTFFVATGLPRAFTSSSDQPFLAVCLLRQIRFHFTSEHHFGFEAAAWYWHFVDVVWLFLYMSMCRWGS
SIO_010081: COX3
subclass of: SO_0000673
so part of: COX3
location: 8755..9543
location: region:8755-9543:1
so has part: feature:8755-9543:1:exon

YP_009034537.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:8755-9543:1:exon

tRNA
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 433684
product: tRNA-Gly
so part of: sequence
location: 9544..9614
location: region:9544-9614:1
so has part: feature:9544-9614:1:region

position:9544:1
position: 9544
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9614:1
position: 9614
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9544-9614:1:region

ND3
type: Gene
subclass of: SO_0000704
RO_0002162: 433684
gene: ND3
so part of: sequence
location: 9615..9963
location: region:9615-9963:1
so has part: feature:9615-9963:1:exon
subclass of: SO_0000010

19524538
type: Gene
SIO_000068: ncbigene

position:9615:1
position: 9615
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9963:1
position: 9963
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9615-9963:1:exon

ND3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 433684
gene: ND3
note: TAA stop codon is completed by the addition of 3' A residues to the mRNA
codon start: 1
transl except: (pos:9963,aa:TERM)
transl table: 2
product: NADH dehydrogenase subunit 3
translation: MNLLTTMLIITTALSLILMTVSFWLPALTPDYQKLSPFECGFDPLGSARLPFSLRLLLVAILFLLFDLEIALLLPLPWGDQLPSPTLTLMWTSALLILLTIGLAYEWLQGGLEWAE
SIO_010081: ND3
subclass of: SO_0000673
so part of: ND3
location: 9615..9963
location: region:9615-9963:1
so has part: feature:9615-9963:1:exon

YP_009034538.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:9615-9963:1:exon

tRNA
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 433684
product: tRNA-Arg
so part of: sequence
location: 9964..10033
location: region:9964-10033:1
so has part: feature:9964-10033:1:region

position:9964:1
position: 9964
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:10033:1
position: 10033
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9964-10033:1:region

ND4L
type: Gene
subclass of: SO_0000704
RO_0002162: 433684
gene: ND4L
so part of: sequence
location: 10034..10330
location: region:10034-10330:1
so has part: feature:10034-10330:1:exon
subclass of: SO_0000010

19524539
type: Gene
SIO_000068: ncbigene

position:10034:1
position: 10034
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:10330:1
position: 10330
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:10034-10330:1:exon

ND4L
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 433684
gene: ND4L
codon start: 1
transl table: 2
product: NADH dehydrogenase subunit 4L
translation: MTLIQLSFTSVFFLGLFGLAFYRVHLLSALLCLESMMLALFLALSTWSLQMSSTSFSAAPLLLLAFSACEAGVGLALMVATARTHGSDHLQNLNLLQC
SIO_010081: ND4L
subclass of: SO_0000673
so part of: ND4L
location: 10034..10330
location: region:10034-10330:1
so has part: feature:10034-10330:1:exon

YP_009034539.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:10034-10330:1:exon

ND4
type: Gene
subclass of: SO_0000704
RO_0002162: 433684
gene: ND4
so part of: sequence
location: 10324..11704
location: region:10324-11704:1
so has part: feature:10324-11704:1:exon
subclass of: SO_0000010

19524540
type: Gene
SIO_000068: ncbigene

position:10324:1
position: 10324
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:11704:1
position: 11704
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:10324-11704:1:exon

ND4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 433684
gene: ND4
note: TAA stop codon is completed by the addition of 3' A residues to the mRNA
codon start: 1
transl except: (pos:11704,aa:TERM)
transl table: 2
product: NADH dehydrogenase subunit 4
translation: MLKILIPTTMLILATWLTPPKWLWPSSLLNSLLIALTSLLWLKNASETGWTFLNPYLATDPLSTPLLILSCWLLPLMILASQNHTSHEPINRQRMYITLLASLQFFLILAFSATEMIMFYVMFEATLIPTLILITRWGNQAERLNAGTYFLFYTLAGSLPLLIALLLLQNSNGSLSLLMLPHLGQLELTSYADKIWWAGCILAFLVKMPLYGVHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMMRILVTLDPLTKELSYPFIVLALWGVIMTGSICMRQTDLKSLIAYSSVSHMGLVVGGILIQTPWGFTGALILMIAHGLTSSALFCLANTSYERTHSRTMLLARGMQMILPLMAAWWFIASLANLALPPLPNLMGELMIITSLFNWSPWTIGLTGLGTLITAGYSLYMFLMTQRGPAPSHLLALEPSHTREHLLIALHLLPLILIITKPELIWGWTA
SIO_010081: ND4
subclass of: SO_0000673
so part of: ND4
location: 10324..11704
location: region:10324-11704:1
so has part: feature:10324-11704:1:exon

YP_009034540.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:10324-11704:1:exon

tRNA
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 433684
product: tRNA-His
so part of: sequence
location: 11705..11773
location: region:11705-11773:1
so has part: feature:11705-11773:1:region

position:11705:1
position: 11705
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:11773:1
position: 11773
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11705-11773:1:region

tRNA
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 433684
product: tRNA-Ser
so part of: sequence
location: 11774..11841
location: region:11774-11841:1
so has part: feature:11774-11841:1:region

position:11774:1
position: 11774
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:11841:1
position: 11841
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11774-11841:1:region

tRNA
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 433684
product: tRNA-Leu
so part of: sequence
location: 11847..11919
location: region:11847-11919:1
so has part: feature:11847-11919:1:region

position:11847:1
position: 11847
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:11919:1
position: 11919
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11847-11919:1:region

ND5
type: Gene
subclass of: SO_0000704
RO_0002162: 433684
gene: ND5
so part of: sequence
location: 11920..13758
location: region:11920-13758:1
so has part: feature:11920-13758:1:exon
subclass of: SO_0000010

19524541
type: Gene
SIO_000068: ncbigene

position:11920:1
position: 11920
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:13758:1
position: 13758
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11920-13758:1:exon

ND5
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 433684
gene: ND5
codon start: 1
transl table: 2
product: NADH dehydrogenase subunit 5
translation: MHSTPLIMTSTLIIIFALLIYPVLTTFSPKPQNPNWALIQVKTAVKYAFLVSLLPLCLHLNEGTESIITNLNWMNTLTFDINISLKFDSYSIIFTPVALYVTWSILEFASWYMHSDPFMNRFYKYLLVFLIAMIILVTANNMFQLFIGWEGVGIMSFLLIGWWYARADANTAALQAVIYNRVGDIGLIIAMAWMATHLNSWELQQIFFSTKNMDMTLPLVALILAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLMIRISPLLETNPTALTLCLCLGALTTLFTATCALTQNDIKKIVAFSTSSQLGLMMVTIGLNQPQLAFLHICTHAFFKAMLFLCSGSIIHSLNDEQDIRKMGGMHHLTPVTSSCLTIGSLALTGTPFLAGFFSKDAIIESLTTSQLNAWALCLTLLATSFTAIYSLRVVFFVSMGHPRFNSLSPINENNPSVINPIKRLAWGSIIAGLLITTNLLPTKTPVMSMPMVVKLTALIVTILGLLIALELASLTSKQLKPTPHLSPHHFSNMLGFFPTIVHRASPKINLILGQTIATQIIDLTWLEKVGPKTISSINTPLISTISNIQQGSIKTYLVLFLTTLALSTLVLLT
SIO_010081: ND5
subclass of: SO_0000673
so part of: ND5
location: 11920..13758
location: region:11920-13758:1
so has part: feature:11920-13758:1:exon

YP_009034541.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:11920-13758:1:exon

ND6
type: Gene
subclass of: SO_0000704
RO_0002162: 433684
gene: ND6
so part of: sequence
location: complement(13754..14275)
location: region:13754-14275:-1
so has part: feature:13754-14275:-1:exon
subclass of: SO_0000010

19524542
type: Gene
SIO_000068: ncbigene

position:13754:-1
position: 13754
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:14275:-1
position: 14275
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:13754-14275:-1:exon

ND6
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 433684
gene: ND6
codon start: 1
transl table: 2
product: NADH dehydrogenase subunit 6
translation: MFYALVFLLLGMLVVMIVLSTNPAPFYGVFNLVLVALLCCGASVLHGGTFLSLVLLMIYMGGMLVVFIYSSALSADKDPKAPTGWQVVLFFFGYFFFVFGILYTNMVLDEEVWWGVSGEMDWDAVFRGDMDGVSLMYSSGGGVLLLGAWVLLLTLLVVLELVRGLGRGALRAV
SIO_010081: ND6
subclass of: SO_0000673
so part of: ND6
location: complement(13754..14275)
location: region:13754-14275:-1
so has part: feature:13754-14275:-1:exon

YP_009034542.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:13754-14275:-1:exon

tRNA
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 433684
product: tRNA-Glu
so part of: sequence
location: complement(14276..14344)
location: region:14276-14344:-1
so has part: feature:14276-14344:-1:region

position:14276:-1
position: 14276
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:14344:-1
position: 14344
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:14276-14344:-1:region

CYTB
type: Gene
subclass of: SO_0000704
RO_0002162: 433684
gene: CYTB
so part of: sequence
location: 14349..15485
location: region:14349-15485:1
so has part: feature:14349-15485:1:exon
subclass of: SO_0000010

19524543
type: Gene
SIO_000068: ncbigene

position:14349:1
position: 14349
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:15485:1
position: 15485
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:14349-15485:1:exon

CYTB
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 433684
gene: CYTB
codon start: 1
transl table: 2
product: cytochrome b
translation: MASLRKTHPLLKIVNDMVIDLPTPSNISAWWNFGSLLGLCLITQIITGLFLAMHYTSDISTAFSSVAHICRDVNYGWLIRNLHANGASFFFICLYSHIGRGLYYGSYLSKETWNVGVVLLLLVMATAFVGYVLPWGQMSFWGATVITNLLSAVPYVGNTLVQWVWGGFSVDSATLTRFFAFHFLLPFIVAAAAIVHLIFLHETGSNNPLGLNSNADKIPFHPYFSYKDLLGFTIMLSALATLALFSPNYLGDPDNFTPANPLVTPAHIKPEWYFLFAYAILRSIPNKLGGVLALLASILILMVVPFLHTSKQRSLTFRPLSQFLFWTLIADVVILTWIGGMPVEHPYIIIGQIASVLYFSLFLILMPMAGWLENKMLN
SIO_010081: CYTB
subclass of: SO_0000673
so part of: CYTB
location: 14349..15485
location: region:14349-15485:1
so has part: feature:14349-15485:1:exon

YP_009034543.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:14349-15485:1:exon

tRNA
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 433684
product: tRNA-Thr
so part of: sequence
location: 15489..15560
location: region:15489-15560:1
so has part: feature:15489-15560:1:region

position:15489:1
position: 15489
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:15560:1
position: 15560
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:15489-15560:1:region

tRNA
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 433684
product: tRNA-Pro
so part of: sequence
location: complement(15560..15629)
location: region:15560-15629:-1
so has part: feature:15560-15629:-1:region

position:15560:-1
position: 15560
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:15629:-1
position: 15629
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:15560-15629:-1:region

D-loop
type: Displacement Loop
subclass of: SO_0000297
RO_0002162: 433684
note: control region
so part of: sequence
location: 15630..16449
location: region:15630-16449:1
so has part: feature:15630-16449:1:region

position:15630:1
position: 15630
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:15630-16449:1:region