Hirundo rustica isolate bHirRus1 chromosome 39, bHirRus1.pri.v3, whole genome shotgun sequence.
type: Entry
definition: Hirundo rustica isolate bHirRus1 chromosome 39, bHirRus1.pri.v3, whole genome shotgun sequence.
sequence version: NC_080709.1
sequence date: 2023-07-25
sequence: sequence
division: CON
label: NC_080709.1
type: RefSeq
SIO_000068: refseq
dblink: PRJNA713843
dblink: SAMN14675488
keyword: WGS
keyword: RefSeq
source: Hirundo rustica (Barn swallow)
organism: Hirundo rustica
taxonomy: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Passeriformes; Sylvioidea; Hirundinidae; Hirundo.
comment: REFSEQ INFORMATION: The reference sequence is identical to\nCM037479.1.\nAssembly name: bHirRus1.pri.v3\nThe genomic sequence for this RefSeq record is from the\nwhole-genome assembly released by the Vertebrate Genomes Project on\n2021/11/30. The original whole-genome shotgun project has the\naccession JADDRP000000000.3.\n\n##Genome-Assembly-Data-START##\nAssembly Provider :: Vertebrate Genomes Project\nAssembly Date :: 20-AUG-2021\nAssembly Method :: FALCON v. DX 2.0.1; FALCON-Unzip v. DX\n 1.2.1; purge_dups v. DX 19-08-10;\n scaff10X v. DX 2.0.3; bionano Solve v. DX\n 3.4.0; Salsa2 HiC v. DX 2.2.0; Arrow\n polishing and gap filling v. DX 7.0.1.1;\n Longranger Align v. DX 2.2.2.1; freebayes\n v. DX 19-07-11; gEVAL manual curation v.\n 2020-02-11; VGP assembly pipeline v. 1.6;\n Manual Curation BUSCO v. 2021-01-11;\n Manual Curation v. 2021-08-20\nAssembly Name :: bHirRus1.pri.v3\nDiploid :: Principal Pseudohaplotype\nGenome Representation :: Full\nExpected Final Version :: No\nGenome Coverage :: 51.15x\nSequencing Technology :: PacBio Sequel I CLR; Illumina NovaSeq;\n Arima Genomics Hi-C; Bionano Genomics DLS\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI RefSeq\nAnnotation Status :: Full annotation\nAnnotation Name :: GCF_015227805.2-RS_2023_07\nAnnotation Pipeline :: NCBI eukaryotic genome annotation\n pipeline\nAnnotation Software Version :: 10.1\nAnnotation Method :: Gnomon; cmsearch; tRNAscan-SE\nFeatures Annotated :: Gene; mRNA; CDS; ncRNA\nAnnotation Date :: 07/19/2023\n##Genome-Annotation-Data-END##

sequence
subclass of: SO_0000340
sequence length: 65965
topology: linear
so has quality: SO_0000987
location: 1..65965
location: region:1-65965:1
RO_0002162: 43150

NC_080709
type: RefSeq
SIO_000068: refseq

PRJNA713843
type: BioProject
SIO_000068: bioproject

SAMN14675488
type: BioSample
SIO_000068: biosample

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:65965:1
position: 65965
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-65965:1:source
so part of: sequence
organism: Hirundo rustica
mol type: genomic DNA
isolate: bHirRus1
chromosome: 39
sex: female
tissue type: muscle
dev stage: adult
country: Italy
collection date: 22-May-2018
collected by: Giulio Formenti, Nicola Saino

43150
type: Taxonomy
SIO_000068: taxonomy

LOC120748270
type: Gene
subclass of: SO_0000704
RO_0002162: 43150
gene: LOC120748270
note: 2-oxoisovalerate dehydrogenase subunit alpha, mitochondrial-like; Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: complement(1996..12400)
location: region:1996-12400:-1
so has part: feature:1996-12400:-1:exon

120748270
type: Gene
SIO_000068: ncbigene

position:1996:-1
position: 1996
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:12400:-1
position: 12400
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1996-12400:-1:exon

LOC120748270
type: Exon
subclass of: SO_0000147
RO_0002162: 43150
gene: LOC120748270
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein
pseudo: true
SIO_010081: LOC120748270
subclass of: SO_0000673
so part of: LOC120748270
location: complement(1996..2252)
location: region:1996-2252:-1
so has part: feature:1996-2252:-1:exon

position:2252:-1
position: 2252
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1996-2252:-1:exon

LOC120748270
type: Exon
subclass of: SO_0000147
RO_0002162: 43150
gene: LOC120748270
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein
pseudo: true
SIO_010081: LOC120748270
subclass of: SO_0000673
so part of: LOC120748270
location: complement(3634..3830)
location: region:3634-3830:-1
so has part: feature:3634-3830:-1:exon

position:3634:-1
position: 3634
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3830:-1
position: 3830
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3634-3830:-1:exon

LOC120748270
type: Exon
subclass of: SO_0000147
RO_0002162: 43150
gene: LOC120748270
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein
pseudo: true
SIO_010081: LOC120748270
subclass of: SO_0000673
so part of: LOC120748270
location: complement(5409..5552)
location: region:5409-5552:-1
so has part: feature:5409-5552:-1:exon

position:5409:-1
position: 5409
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5552:-1
position: 5552
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5409-5552:-1:exon

LOC120748270
type: Exon
subclass of: SO_0000147
RO_0002162: 43150
gene: LOC120748270
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein
pseudo: true
SIO_010081: LOC120748270
subclass of: SO_0000673
so part of: LOC120748270
location: complement(6781..6948)
location: region:6781-6948:-1
so has part: feature:6781-6948:-1:exon

position:6781:-1
position: 6781
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6948:-1
position: 6948
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6781-6948:-1:exon

LOC120748270
type: Exon
subclass of: SO_0000147
RO_0002162: 43150
gene: LOC120748270
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein
pseudo: true
SIO_010081: LOC120748270
subclass of: SO_0000673
so part of: LOC120748270
location: complement(7791..7839)
location: region:7791-7839:-1
so has part: feature:7791-7839:-1:exon

position:7791:-1
position: 7791
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7839:-1
position: 7839
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7791-7839:-1:exon

LOC120748270
type: Exon
subclass of: SO_0000147
RO_0002162: 43150
gene: LOC120748270
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein
pseudo: true
SIO_010081: LOC120748270
subclass of: SO_0000673
so part of: LOC120748270
location: complement(8518..8679)
location: region:8518-8679:-1
so has part: feature:8518-8679:-1:exon

position:8518:-1
position: 8518
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8679:-1
position: 8679
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8518-8679:-1:exon

LOC120748270
type: Exon
subclass of: SO_0000147
RO_0002162: 43150
gene: LOC120748270
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein
pseudo: true
SIO_010081: LOC120748270
subclass of: SO_0000673
so part of: LOC120748270
location: complement(9663..9771)
location: region:9663-9771:-1
so has part: feature:9663-9771:-1:exon

position:9663:-1
position: 9663
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9771:-1
position: 9771
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9663-9771:-1:exon

LOC120748270
type: Exon
subclass of: SO_0000147
RO_0002162: 43150
gene: LOC120748270
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein
pseudo: true
SIO_010081: LOC120748270
subclass of: SO_0000673
so part of: LOC120748270
location: complement(10000..10086)
location: region:10000-10086:-1
so has part: feature:10000-10086:-1:exon

position:10000:-1
position: 10000
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:10086:-1
position: 10086
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:10000-10086:-1:exon

LOC120748270
type: Exon
subclass of: SO_0000147
RO_0002162: 43150
gene: LOC120748270
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein
pseudo: true
SIO_010081: LOC120748270
subclass of: SO_0000673
so part of: LOC120748270
location: complement(10793..10945)
location: region:10793-10945:-1
so has part: feature:10793-10945:-1:exon

position:10793:-1
position: 10793
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:10945:-1
position: 10945
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:10793-10945:-1:exon

LOC120748270
type: Exon
subclass of: SO_0000147
RO_0002162: 43150
gene: LOC120748270
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein
pseudo: true
SIO_010081: LOC120748270
subclass of: SO_0000673
so part of: LOC120748270
location: complement(12170..12400)
location: region:12170-12400:-1
so has part: feature:12170-12400:-1:exon

position:12170:-1
position: 12170
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:12170-12400:-1:exon

LOC120748265
type: Gene
subclass of: SO_0000704
RO_0002162: 43150
gene: LOC120748265
note: MAP/microtubule affinity-regulating kinase 4-like; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(14159..28933)
location: region:14159-28933:-1
so has part: feature:14159-28933:-1:exon
subclass of: SO_0000010

120748265
type: Gene
SIO_000068: ncbigene

position:14159:-1
position: 14159
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:28933:-1
position: 28933
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:14159-28933:-1:exon

LOC120748265
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 43150
gene: LOC120748265
product: MAP/microtubule affinity-regulating kinase 4-like
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 3 bases in 2 codons; deleted 2 bases in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins
transcript id: XM_058423219.1
SIO_010081: LOC120748265
subclass of: SO_0000673
so part of: LOC120748265
location: complement(join(14159..14285,15004..15048,15728..15807,16513..16685,16718..16805,17720..17820,18613..18847,19603..19751,20282..20391,20625..20724,21732..21850,22852..23088,24153..24208,24728..24820,25375..25440,25841..25889,26292..26345,27098..27397,28883..28933))
location: region:14159-28933:-1
so has part: feature:28883-28933:-1:exon
so has part: feature:27098-27397:-1:exon
so has part: feature:26292-26345:-1:exon
so has part: feature:25841-25889:-1:exon
so has part: feature:25375-25440:-1:exon
so has part: feature:24728-24820:-1:exon
so has part: feature:24153-24208:-1:exon
so has part: feature:22852-23088:-1:exon
so has part: feature:21732-21850:-1:exon
so has part: feature:20625-20724:-1:exon
so has part: feature:20282-20391:-1:exon
so has part: feature:19603-19751:-1:exon
so has part: feature:18613-18847:-1:exon
so has part: feature:17720-17820:-1:exon
so has part: feature:16718-16805:-1:exon
so has part: feature:16513-16685:-1:exon
so has part: feature:15728-15807:-1:exon
so has part: feature:15004-15048:-1:exon
so has part: feature:14159-14285:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:28883-28933:-1:exon

position:28883:-1
position: 28883
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:27098-27397:-1:exon

position:27098:-1
position: 27098
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:27397:-1
position: 27397
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:26292-26345:-1:exon

position:26292:-1
position: 26292
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:26345:-1
position: 26345
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:25841-25889:-1:exon

position:25841:-1
position: 25841
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:25889:-1
position: 25889
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:25375-25440:-1:exon

position:25375:-1
position: 25375
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:25440:-1
position: 25440
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:24728-24820:-1:exon

position:24728:-1
position: 24728
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:24820:-1
position: 24820
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:24153-24208:-1:exon

position:24153:-1
position: 24153
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:24208:-1
position: 24208
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:22852-23088:-1:exon

position:22852:-1
position: 22852
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:23088:-1
position: 23088
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:21732-21850:-1:exon

position:21732:-1
position: 21732
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:21850:-1
position: 21850
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:20625-20724:-1:exon

position:20625:-1
position: 20625
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:20724:-1
position: 20724
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:20282-20391:-1:exon

position:20282:-1
position: 20282
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:20391:-1
position: 20391
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:19603-19751:-1:exon

position:19603:-1
position: 19603
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:19751:-1
position: 19751
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:18613-18847:-1:exon

position:18613:-1
position: 18613
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:18847:-1
position: 18847
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:17720-17820:-1:exon

position:17720:-1
position: 17720
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:17820:-1
position: 17820
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:16718-16805:-1:exon

position:16718:-1
position: 16718
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:16805:-1
position: 16805
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:16513-16685:-1:exon

position:16513:-1
position: 16513
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:16685:-1
position: 16685
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:15728-15807:-1:exon

position:15728:-1
position: 15728
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:15807:-1
position: 15807
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:15004-15048:-1:exon

position:15004:-1
position: 15004
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:15048:-1
position: 15048
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:14159-14285:-1:exon

position:14285:-1
position: 14285
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC120748265
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 43150
gene: LOC120748265
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 3 bases in 2 codons; deleted 2 bases in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: MAP/microtubule affinity-regulating kinase 4-like
translation: MSSRSALAAGNERNADTFEEGSHLPAVIRGGVSPPRCNSGRGLTSPLPAAGGPGGQRPPREGRGGWSGRGGPEPPGAGNSLGAEEPPHVGNYRLLRTIGKGNFAKVKLARHVLTGREVAIKIIDKTQLNPTSLQKLFREVRIMKGLNHPNIVKLFEVIETEKTLYLVMEYASAGEVFDYLVSHGRMKEKEAAGAKFRQVGTRGTDRLGVHYCHQKNIVHRDLKAENLLLDADANIKIADFGFSNEFSRGSKLDTFCGSPPYAAPELFQGKKYDGPEVDIWSLGVILYTLVSGSLPFDGHNLKELRERVLRGKYRXPFYMSTDCENILRRFLVLNPAKRCTLEQIMKDKWINIGYEGDELTPYTEPQEDFGDTKRIEVMVGMGYTRDEIKEALSTHKYNEVTATYLLLGRRGEPEGGSALSLSRLRAPAEAPNGATKSGTSGTHGKGQRGGRXHHRQRRHSDFCGPAPAPAPPKRSPTSAGAAELREGGVASREGGVASRRGRGSGGGGGGGPGAPPSSPLVSSAHNPNKAEIPERHPDSAPHVPPSVMGRRNTYVCSERPGGERHLLLPNGKDSLPSRPPPSPSSHSLGGAHLGGAHLGGAHLHLPRRRGRGGRGPPRGGRGLGSPSPFSPPPPPAPAAASPRPRPTATLLSKITSKLTRRVSLDPSRRQSSNRCVSATPGPGAAKIRSQTNLRESGDLRSQVAIYLGIKRKPPPGCSEGGGL
SIO_010081: LOC120748265
subclass of: SO_0000673
so part of: LOC120748265
location: complement(join(14221..14285,15004..15048,15728..15807,16513..16685,16718..16805,17720..17820,18613..18847,19603..19751,20282..20391,20625..20724,21732..21850,22852..23088,24153..24208,24728..24820,25375..25440,25841..25889,26292..26345,27098..27397,28883..28933))
location: region:14221-28933:-1
so has part: feature:28883-28933:-1:exon
so has part: feature:27098-27397:-1:exon
so has part: feature:26292-26345:-1:exon
so has part: feature:25841-25889:-1:exon
so has part: feature:25375-25440:-1:exon
so has part: feature:24728-24820:-1:exon
so has part: feature:24153-24208:-1:exon
so has part: feature:22852-23088:-1:exon
so has part: feature:21732-21850:-1:exon
so has part: feature:20625-20724:-1:exon
so has part: feature:20282-20391:-1:exon
so has part: feature:19603-19751:-1:exon
so has part: feature:18613-18847:-1:exon
so has part: feature:17720-17820:-1:exon
so has part: feature:16718-16805:-1:exon
so has part: feature:16513-16685:-1:exon
so has part: feature:15728-15807:-1:exon
so has part: feature:15004-15048:-1:exon
so has part: feature:14221-14285:-1:exon

XP_058279202.1
type: Protein
SIO_000068: ncbiprotein

position:14221:-1
position: 14221
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:28883-28933:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:27098-27397:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:26292-26345:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:25841-25889:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:25375-25440:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:24728-24820:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:24153-24208:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:22852-23088:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:21732-21850:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:20625-20724:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:20282-20391:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:19603-19751:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:18613-18847:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:17720-17820:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:16718-16805:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:16513-16685:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:15728-15807:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:15004-15048:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:14221-14285:-1:exon

EXOC3L2
type: Gene
subclass of: SO_0000704
RO_0002162: 43150
gene: EXOC3L2
note: exocyst complex component 3 like 2; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 31197..40076
location: region:31197-40076:1
so has part: feature:31197-40076:1:exon
subclass of: SO_0000010

120748266
type: Gene
SIO_000068: ncbigene

position:31197:1
position: 31197
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:40076:1
position: 40076
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:31197-40076:1:exon

EXOC3L2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 43150
gene: EXOC3L2
product: exocyst complex component 3 like 2
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein
transcript id: XM_040054383.1
SIO_010081: EXOC3L2
subclass of: SO_0000673
so part of: EXOC3L2
location: join(31197..31301,31524..31647,32246..32906,33418..33532,34211..34321,34809..34910,35150..35491,36195..36317,37331..37486,38056..38177,39846..40076)
location: region:31197-40076:1
so has part: feature:31197-31301:1:exon
so has part: feature:31524-31647:1:exon
so has part: feature:32246-32906:1:exon
so has part: feature:33418-33532:1:exon
so has part: feature:34211-34321:1:exon
so has part: feature:34809-34910:1:exon
so has part: feature:35150-35491:1:exon
so has part: feature:36195-36317:1:exon
so has part: feature:37331-37486:1:exon
so has part: feature:38056-38177:1:exon
so has part: feature:39846-40076:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:31197-31301:1:exon

position:31301:1
position: 31301
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:31524-31647:1:exon

position:31524:1
position: 31524
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:31647:1
position: 31647
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:32246-32906:1:exon

position:32246:1
position: 32246
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:32906:1
position: 32906
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:33418-33532:1:exon

position:33418:1
position: 33418
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:33532:1
position: 33532
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:34211-34321:1:exon

position:34211:1
position: 34211
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:34321:1
position: 34321
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:34809-34910:1:exon

position:34809:1
position: 34809
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:34910:1
position: 34910
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:35150-35491:1:exon

position:35150:1
position: 35150
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:35491:1
position: 35491
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:36195-36317:1:exon

position:36195:1
position: 36195
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:36317:1
position: 36317
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:37331-37486:1:exon

position:37331:1
position: 37331
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:37486:1
position: 37486
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:38056-38177:1:exon

position:38056:1
position: 38056
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:38177:1
position: 38177
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:39846-40076:1:exon

position:39846:1
position: 39846
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

EXOC3L2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 43150
gene: EXOC3L2
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: exocyst complex component 3-like protein 2
translation: MPLLRRPPGGAQEDGDPFATNPESRRRRRATLGGLRGTEKVSPVEGQAGDGAEGAGPRPESGRRDEDGGRDREPLSVLEILELIQRRELVAADAQIIALEAECSLSPSRPPSPVSPPGVSPSAGSPPPSPRPSGGRRARDVALLYRALLAQLWAVVAEAVAAERAVAPLRAVVAVLEQEEAADARSPPGTHPGRPRGLRRRWSEAVARAAGERLAQVAPAGGLGARLAALAARVVGDLGVVRSHVAPAYPPEYGALGVYARGYHRALAQQLRALAQRPLAVPELYLLLDWHSNAYPREVLGHPEVGALLRAQELGPLLPPETQRDLESSCIAAVKAKVEVAVAQELQLSEDTWPEDVTSQDMDEGLATRVIGLLRAHVDRAPQVTPRVRAGDGPQPAGRAGGLPAQLPAEGRAVPGSPRRCPLPCRGRPGPRHRLGQLLSPLQVRPPAVSPGARVPAVPSPVSPARVPPPRHPGRAFAERLAQFGHPESEEPRRQAHAALDRVTRACGHVLTRRLLEDLKPHFGKLMKRKWLTSSDAFDAIVMRVTGFAQTLRPLHPEPHQVLVSELHRRVLIEYVRPLLQGRLVCASAKARARVAQRLGDEARQLRELFTRLDSAWPWLDSVVPRLRELLVLEDTAALQMEVGALARDFPDVRRRHVAALLDARGXRAQGPRREILGVLQDLEGSEAEPGPPRHRTFFSELPAPRPVRCLPFHLPRLRLPRRSPARTPP
SIO_010081: EXOC3L2
subclass of: SO_0000673
so part of: EXOC3L2
location: join(31197..31301,31524..31647,32246..32906,33418..33532,34211..34321,34809..34910,35150..35491,36195..36317,37331..37486,38056..38177,39846..40076)
location: region:31197-40076:1
so has part: feature:31197-31301:1:exon
so has part: feature:31524-31647:1:exon
so has part: feature:32246-32906:1:exon
so has part: feature:33418-33532:1:exon
so has part: feature:34211-34321:1:exon
so has part: feature:34809-34910:1:exon
so has part: feature:35150-35491:1:exon
so has part: feature:36195-36317:1:exon
so has part: feature:37331-37486:1:exon
so has part: feature:38056-38177:1:exon
so has part: feature:39846-40076:1:exon

XP_039910317.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:31197-31301:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:31524-31647:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:32246-32906:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:33418-33532:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:34211-34321:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:34809-34910:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:35150-35491:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:36195-36317:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:37331-37486:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:38056-38177:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:39846-40076:1:exon

FOSB
type: Gene
subclass of: SO_0000704
RO_0002162: 43150
gene: FOSB
note: FosB proto-oncogene, AP-1 transcription factor subunit; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(43178..49838)
location: region:43178-49838:-1
so has part: feature:43178-49838:-1:exon
subclass of: SO_0000010

120748268
type: Gene
SIO_000068: ncbigene

position:43178:-1
position: 43178
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:49838:-1
position: 49838
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:43178-49838:-1:exon

FOSB
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 43150
gene: FOSB
product: FosB proto-oncogene, AP-1 transcription factor subunit
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins
transcript id: XM_040054386.2
SIO_010081: FOSB
subclass of: SO_0000673
so part of: FOSB
location: complement(join(43178..45208,46502..46609,47679..47948,49058..49838))
location: region:43178-49838:-1
so has part: feature:49058-49838:-1:exon
so has part: feature:47679-47948:-1:exon
so has part: feature:46502-46609:-1:exon
so has part: feature:43178-45208:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:49058-49838:-1:exon

position:49058:-1
position: 49058
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:47679-47948:-1:exon

position:47679:-1
position: 47679
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:47948:-1
position: 47948
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:46502-46609:-1:exon

position:46502:-1
position: 46502
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:46609:-1
position: 46609
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:43178-45208:-1:exon

position:45208:-1
position: 45208
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

FOSB
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 43150
gene: FOSB
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein FosB
translation: MFQGFPGDYDSGSRCSSSPSAESQYLSPLDSFGSPAAAGAAQECSALGDMPGSFVPTVTAITTSQDLQWLVQPTLISSVAPGAPMAQPPPLDPYDLPGPSYSTPGLGAFAGPPGPAPARAPRARPRRSREETLTPEEEEKRRVRRERNKLAAAKCRNRRRELTDRLQAETDQLEEEKAELESEIAELRKEKERLEFVLVAHAPACKVPFEDIGDIGALGAGPAEVSSPGKAGTVAFLPPAPFQGPQGPFPGCCLPPGVPAGPPNATPAFVFTHPEGATCGASHQRSSSSDQSSDSLNSPSLLAL
SIO_010081: FOSB
subclass of: SO_0000673
so part of: FOSB
location: complement(join(44798..45208,46502..46609,47679..47948,49058..49183))
location: region:44798-49183:-1
so has part: feature:49058-49183:-1:exon
so has part: feature:47679-47948:-1:exon
so has part: feature:46502-46609:-1:exon
so has part: feature:44798-45208:-1:exon

XP_039910320.1
type: Protein
SIO_000068: ncbiprotein

position:44798:-1
position: 44798
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:49183:-1
position: 49183
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:49058-49183:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:47679-47948:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:46502-46609:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:44798-45208:-1:exon

LOC131378703
type: Gene
subclass of: SO_0000704
RO_0002162: 43150
gene: LOC131378703
note: reticulon-1-A-like; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(52899..>55853)
location: region:52899-55853:-1
so has part: feature:52899-55853:-1:exon
subclass of: SO_0000010

131378703
type: Gene
SIO_000068: ncbigene

position:52899:-1
position: 52899
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:55853:-1
position: 55853
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:52899-55853:-1:exon

LOC131378703
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 43150
gene: LOC131378703
product: reticulon-1-A-like
note: Derived by automated computational analysis using gene prediction method: Gnomon.
transcript id: XM_058423584.1
SIO_010081: LOC131378703
subclass of: SO_0000673
so part of: LOC131378703
location: complement(join(52899..53024,53234..53292,53611..53657,54270..54339,55129..55260,55839..>55853))
location: region:52899-55853:-1
so has part: feature:55839-55853:-1:exon
so has part: feature:55129-55260:-1:exon
so has part: feature:54270-54339:-1:exon
so has part: feature:53611-53657:-1:exon
so has part: feature:53234-53292:-1:exon
so has part: feature:52899-53024:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:55839-55853:-1:exon

position:55839:-1
position: 55839
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:55129-55260:-1:exon

position:55129:-1
position: 55129
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:55260:-1
position: 55260
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:54270-54339:-1:exon

position:54270:-1
position: 54270
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:54339:-1
position: 54339
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:53611-53657:-1:exon

position:53611:-1
position: 53611
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:53657:-1
position: 53657
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:53234-53292:-1:exon

position:53234:-1
position: 53234
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:53292:-1
position: 53292
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:52899-53024:-1:exon

position:53024:-1
position: 53024
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC131378703
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 43150
gene: LOC131378703
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: reticulon-1-A-like
translation: AAPGAGGGGGAEPGAAAALGAAPGATRGVTATRTLTRLFLVHSVPESLKFAFLFYLLTYVGAVCNGLTLLAAGVVCAFTFPVLYRRHQAQIEQHLSLVRSHLSHLRARVLAKLPSAKVKPQ
SIO_010081: LOC131378703
subclass of: SO_0000673
so part of: LOC131378703
location: complement(join(52982..53024,53234..53292,53611..53657,54270..54339,55129..55260,55839..>55853))
location: region:52982-55853:-1
so has part: feature:55839-55853:-1:exon
so has part: feature:55129-55260:-1:exon
so has part: feature:54270-54339:-1:exon
so has part: feature:53611-53657:-1:exon
so has part: feature:53234-53292:-1:exon
so has part: feature:52982-53024:-1:exon

XP_058279567.1
type: Protein
SIO_000068: ncbiprotein

position:52982:-1
position: 52982
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:55839-55853:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:55129-55260:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:54270-54339:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:53611-53657:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:53234-53292:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:52982-53024:-1:exon

LOC120748267
type: Gene
subclass of: SO_0000704
RO_0002162: 43150
gene: LOC120748267
note: vasodilator-stimulated phosphoprotein-like; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 60004..64173
location: region:60004-64173:1
so has part: feature:60004-64173:1:exon
subclass of: SO_0000010

120748267
type: Gene
SIO_000068: ncbigene

position:60004:1
position: 60004
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:64173:1
position: 64173
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:60004-64173:1:exon

LOC120748267
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 43150
gene: LOC120748267
product: vasodilator-stimulated phosphoprotein-like
note: Derived by automated computational analysis using gene prediction method: Gnomon.
transcript id: XM_058423705.1
SIO_010081: LOC120748267
subclass of: SO_0000673
so part of: LOC120748267
location: join(60004..60040,60626..60786,62270..62440,63080..63248,63365..63422,64079..64173)
location: region:60004-64173:1
so has part: feature:60004-60040:1:exon
so has part: feature:60626-60786:1:exon
so has part: feature:62270-62440:1:exon
so has part: feature:63080-63248:1:exon
so has part: feature:63365-63422:1:exon
so has part: feature:64079-64173:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:60004-60040:1:exon

position:60040:1
position: 60040
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:60626-60786:1:exon

position:60626:1
position: 60626
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:60786:1
position: 60786
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:62270-62440:1:exon

position:62270:1
position: 62270
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:62440:1
position: 62440
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:63080-63248:1:exon

position:63080:1
position: 63080
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:63248:1
position: 63248
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:63365-63422:1:exon

position:63365:1
position: 63365
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:63422:1
position: 63422
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:64079-64173:1:exon

position:64079:1
position: 64079
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC120748267
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 43150
gene: LOC120748267
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: vasodilator-stimulated phosphoprotein-like
translation: MGTWNRDREPGTGVPGPLPVTAAVTGRGGAGWAGPAHGGRGLSPGPAGPAPAATGRARTGRGRQHERAGAVQRPGRGAALRGGAEAVGAGGGPPQSPSCVQLFHQPGTTCFRLVGRRLHPEQQVVLNCPLGRGLRYSQATPQFHQWREGRRVWGLSFAAPAEAAQFAAAVLRALQALEQGTPWPELDGSAPEQLEQPDRPVMDESERRAGE
SIO_010081: LOC120748267
subclass of: SO_0000673
so part of: LOC120748267
location: join(60004..60040,60626..60786,62270..62440,63080..63248,63365..63422,64079..64118)
location: region:60004-64118:1
so has part: feature:60004-60040:1:exon
so has part: feature:60626-60786:1:exon
so has part: feature:62270-62440:1:exon
so has part: feature:63080-63248:1:exon
so has part: feature:63365-63422:1:exon
so has part: feature:64079-64118:1:exon

XP_058279688.1
type: Protein
SIO_000068: ncbiprotein

position:64118:1
position: 64118
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:60004-60040:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:60626-60786:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:62270-62440:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:63080-63248:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:63365-63422:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:64079-64118:1:exon

LOC120748269
type: Gene
subclass of: SO_0000704
RO_0002162: 43150
gene: LOC120748269
note: vasodilator-stimulated phosphoprotein-like; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 64361..65828
location: region:64361-65828:1
so has part: feature:64361-65828:1:exon
subclass of: SO_0000010

120748269
type: Gene
SIO_000068: ncbigene

position:64361:1
position: 64361
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:65828:1
position: 65828
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:64361-65828:1:exon

LOC120748269
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 43150
gene: LOC120748269
product: vasodilator-stimulated phosphoprotein-like
note: Derived by automated computational analysis using gene prediction method: Gnomon.
transcript id: XM_040054388.2
SIO_010081: LOC120748269
subclass of: SO_0000673
so part of: LOC120748269
location: join(64361..64436,64511..64611,64711..64756,64897..64939,65160..65205,65307..65376,65514..65571,65682..65828)
location: region:64361-65828:1
so has part: feature:64361-64436:1:exon
so has part: feature:64511-64611:1:exon
so has part: feature:64711-64756:1:exon
so has part: feature:64897-64939:1:exon
so has part: feature:65160-65205:1:exon
so has part: feature:65307-65376:1:exon
so has part: feature:65514-65571:1:exon
so has part: feature:65682-65828:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:64361-64436:1:exon

position:64436:1
position: 64436
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:64511-64611:1:exon

position:64511:1
position: 64511
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:64611:1
position: 64611
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:64711-64756:1:exon

position:64711:1
position: 64711
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:64756:1
position: 64756
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:64897-64939:1:exon

position:64897:1
position: 64897
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:64939:1
position: 64939
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:65160-65205:1:exon

position:65160:1
position: 65160
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:65205:1
position: 65205
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:65307-65376:1:exon

position:65307:1
position: 65307
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:65376:1
position: 65376
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:65514-65571:1:exon

position:65514:1
position: 65514
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:65571:1
position: 65571
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:65682-65828:1:exon

position:65682:1
position: 65682
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC120748269
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 43150
gene: LOC120748269
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: vasodilator-stimulated phosphoprotein-like
translation: MEEMSAMLARRRKATEVPKKEDDVTNEEAEPGARTAGPPPEPVRRPWEKSSSTLPRMKSAVPAAPSESHSELDLERFKLELLEEVRRELQKMKEEILEVFVTELRKRNGP
SIO_010081: LOC120748269
subclass of: SO_0000673
so part of: LOC120748269
location: join(64580..64611,64711..64756,64897..64939,65160..65205,65307..65376,65514..65571,65682..65719)
location: region:64580-65719:1
so has part: feature:64580-64611:1:exon
so has part: feature:64711-64756:1:exon
so has part: feature:64897-64939:1:exon
so has part: feature:65160-65205:1:exon
so has part: feature:65307-65376:1:exon
so has part: feature:65514-65571:1:exon
so has part: feature:65682-65719:1:exon

XP_039910322.1
type: Protein
SIO_000068: ncbiprotein

position:64580:1
position: 64580
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:65719:1
position: 65719
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:64580-64611:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:64711-64756:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:64897-64939:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:65160-65205:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:65307-65376:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:65514-65571:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:65682-65719:1:exon