Hirundo rustica isolate bHirRus1 chromosome 37, bHirRus1.pri.v3, whole genome shotgun sequence.
type: Entry
definition: Hirundo rustica isolate bHirRus1 chromosome 37, bHirRus1.pri.v3, whole genome shotgun sequence.
sequence version: NC_053486.1
sequence date: 2023-07-25
sequence: sequence
division: CON
label: NC_053486.1
type: RefSeq
SIO_000068: refseq
dblink: PRJNA713843
dblink: SAMN14675488
keyword: WGS
keyword: RefSeq
source: Hirundo rustica (Barn swallow)
organism: Hirundo rustica
taxonomy: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Passeriformes; Sylvioidea; Hirundinidae; Hirundo.
comment: REFSEQ INFORMATION: The reference sequence is identical to\nCM026883.1.\nAssembly name: bHirRus1.pri.v3\nThe genomic sequence for this RefSeq record is from the\nwhole-genome assembly released by the Vertebrate Genomes Project on\n2021/11/30. The original whole-genome shotgun project has the\naccession JADDRP000000000.3.\n\n##Genome-Assembly-Data-START##\nAssembly Provider :: Vertebrate Genomes Project\nAssembly Date :: 20-AUG-2021\nAssembly Method :: FALCON v. DX 2.0.1; FALCON-Unzip v. DX\n 1.2.1; purge_dups v. DX 19-08-10;\n scaff10X v. DX 2.0.3; bionano Solve v. DX\n 3.4.0; Salsa2 HiC v. DX 2.2.0; Arrow\n polishing and gap filling v. DX 7.0.1.1;\n Longranger Align v. DX 2.2.2.1; freebayes\n v. DX 19-07-11; gEVAL manual curation v.\n 2020-02-11; VGP assembly pipeline v. 1.6;\n Manual Curation BUSCO v. 2021-01-11;\n Manual Curation v. 2021-08-20\nAssembly Name :: bHirRus1.pri.v3\nDiploid :: Principal Pseudohaplotype\nGenome Representation :: Full\nExpected Final Version :: No\nGenome Coverage :: 51.15x\nSequencing Technology :: PacBio Sequel I CLR; Illumina NovaSeq;\n Arima Genomics Hi-C; Bionano Genomics DLS\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI RefSeq\nAnnotation Status :: Full annotation\nAnnotation Name :: GCF_015227805.2-RS_2023_07\nAnnotation Pipeline :: NCBI eukaryotic genome annotation\n pipeline\nAnnotation Software Version :: 10.1\nAnnotation Method :: Gnomon; cmsearch; tRNAscan-SE\nFeatures Annotated :: Gene; mRNA; CDS; ncRNA\nAnnotation Date :: 07/19/2023\n##Genome-Annotation-Data-END##

sequence
subclass of: SO_0000340
sequence length: 276370
topology: linear
so has quality: SO_0000987
location: 1..276370
location: region:1-276370:1
RO_0002162: 43150

NC_053486
type: RefSeq
SIO_000068: refseq

PRJNA713843
type: BioProject
SIO_000068: bioproject

SAMN14675488
type: BioSample
SIO_000068: biosample

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:276370:1
position: 276370
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-276370:1:source
so part of: sequence
organism: Hirundo rustica
mol type: genomic DNA
isolate: bHirRus1
chromosome: 37
sex: female
tissue type: muscle
dev stage: adult
country: Italy
collection date: 22-May-2018
collected by: Giulio Formenti, Nicola Saino

43150
type: Taxonomy
SIO_000068: taxonomy

LOC120764777
type: Gene
subclass of: SO_0000704
RO_0002162: 43150
gene: LOC120764777
note: uncharacterized LOC120764777; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(36310..39848)
location: region:36310-39848:-1
so has part: feature:36310-39848:-1:exon
subclass of: SO_0000011

120764777
type: Gene
SIO_000068: ncbigene

position:36310:-1
position: 36310
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:39848:-1
position: 39848
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:36310-39848:-1:exon

LOC120764777
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 43150
nc RNA class: lncRNA
gene: LOC120764777
product: uncharacterized LOC120764777
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 long SRA read
transcript id: XR_005704273.2
SIO_010081: LOC120764777
subclass of: SO_0000673
so part of: LOC120764777
location: complement(join(36310..36893,37261..37378,39774..39848))
location: region:36310-39848:-1
so has part: feature:39774-39848:-1:exon
so has part: feature:37261-37378:-1:exon
so has part: feature:36310-36893:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:39774-39848:-1:exon

position:39774:-1
position: 39774
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:37261-37378:-1:exon

position:37261:-1
position: 37261
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:37378:-1
position: 37378
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:36310-36893:-1:exon

position:36893:-1
position: 36893
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC120764779
type: Gene
subclass of: SO_0000704
RO_0002162: 43150
gene: LOC120764779
note: cytochrome P450 4F3-like; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 40148..63478
location: region:40148-63478:1
so has part: feature:40148-63478:1:exon
subclass of: SO_0000010

120764779
type: Gene
SIO_000068: ncbigene

position:40148:1
position: 40148
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:63478:1
position: 63478
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:40148-63478:1:exon

LOC120764779
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 43150
gene: LOC120764779
product: cytochrome P450 4F3-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 42 Proteins
transcript id: XM_040088806.1
SIO_010081: LOC120764779
subclass of: SO_0000673
so part of: LOC120764779
location: join(40148..40241,43060..43136,49939..50146,51051..51195,51495..51548,51845..51972,57361..57488,59730..59997,62116..62182,62257..62386,62457..62590,62665..62729,62814..62896,63002..63478)
location: region:40148-63478:1
so has part: feature:40148-40241:1:exon
so has part: feature:43060-43136:1:exon
so has part: feature:49939-50146:1:exon
so has part: feature:51051-51195:1:exon
so has part: feature:51495-51548:1:exon
so has part: feature:51845-51972:1:exon
so has part: feature:57361-57488:1:exon
so has part: feature:59730-59997:1:exon
so has part: feature:62116-62182:1:exon
so has part: feature:62257-62386:1:exon
so has part: feature:62457-62590:1:exon
so has part: feature:62665-62729:1:exon
so has part: feature:62814-62896:1:exon
so has part: feature:63002-63478:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:40148-40241:1:exon

position:40241:1
position: 40241
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:43060-43136:1:exon

position:43060:1
position: 43060
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:43136:1
position: 43136
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:49939-50146:1:exon

position:49939:1
position: 49939
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:50146:1
position: 50146
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:51051-51195:1:exon

position:51051:1
position: 51051
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:51195:1
position: 51195
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:51495-51548:1:exon

position:51495:1
position: 51495
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:51548:1
position: 51548
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:51845-51972:1:exon

position:51845:1
position: 51845
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:51972:1
position: 51972
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:57361-57488:1:exon

position:57361:1
position: 57361
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:57488:1
position: 57488
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:59730-59997:1:exon

position:59730:1
position: 59730
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:59997:1
position: 59997
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:62116-62182:1:exon

position:62116:1
position: 62116
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:62182:1
position: 62182
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:62257-62386:1:exon

position:62257:1
position: 62257
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:62386:1
position: 62386
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:62457-62590:1:exon

position:62457:1
position: 62457
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:62590:1
position: 62590
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:62665-62729:1:exon

position:62665:1
position: 62665
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:62729:1
position: 62729
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:62814-62896:1:exon

position:62814:1
position: 62814
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:62896:1
position: 62896
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:63002-63478:1:exon

position:63002:1
position: 63002
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC120764779
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 43150
gene: LOC120764779
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cytochrome P450 4F3-like
translation: MALGSLGAVALGTLVVSLLLRWLWDGLVAVTRFRATCRRLNEFPTPPWRNWLLGHTGMGKSTEEGLQQVDTLVARYRHGCLWWGFPWVPILRLFHPSTLRPLLSASAFVAPKDKFSYGFLKPWLGDGLLLSGGQRWARHRRLLTPAFHGDVLRDYLGIFNRSTRVLLAKWGAAVAAGGGPVALEVLQPLSLLTLDTLQKCIFSHESHCQERPSEYIQAILELSSLVVRRQLQPLLHPWWLYSLSSDGRRFARACATVHAFTADVVQRRRQALASLGHQAWLDGHRGRSMDFIDLLLLTKDEDGHTLSDEDIAAEADTFMFEGHDTTASGLAWLFYNLASHPEHQERCRQEVQELLAGRDTTDIEWEDLSQLPFTTMCIKESLRLHPPVTAVSRRCTEDVPLRDGRVIPKGVICLMSIYGTHHNPDLWPEPEVFNPLRFSPENSKGRCPSSFIPFSAGPRNCIGQSFAMAEMKVVVALTLSRFVLRRDAARPAPRRKPELILRAEDGIWLLLEPLVGVA
SIO_010081: LOC120764779
subclass of: SO_0000673
so part of: LOC120764779
location: join(49973..50146,51051..51195,51495..51548,51845..51972,57361..57488,59730..59997,62116..62182,62257..62386,62457..62590,62665..62729,62814..62896,63002..63182)
location: region:49973-63182:1
so has part: feature:49973-50146:1:exon
so has part: feature:51051-51195:1:exon
so has part: feature:51495-51548:1:exon
so has part: feature:51845-51972:1:exon
so has part: feature:57361-57488:1:exon
so has part: feature:59730-59997:1:exon
so has part: feature:62116-62182:1:exon
so has part: feature:62257-62386:1:exon
so has part: feature:62457-62590:1:exon
so has part: feature:62665-62729:1:exon
so has part: feature:62814-62896:1:exon
so has part: feature:63002-63182:1:exon

XP_039944740.1
type: Protein
SIO_000068: ncbiprotein

position:49973:1
position: 49973
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:63182:1
position: 63182
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:49973-50146:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:51051-51195:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:51495-51548:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:51845-51972:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:57361-57488:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:59730-59997:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:62116-62182:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:62257-62386:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:62457-62590:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:62665-62729:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:62814-62896:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:63002-63182:1:exon

LOC120764780
type: Gene
subclass of: SO_0000704
RO_0002162: 43150
gene: LOC120764780
note: zinc finger protein 239-like; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(63480..66466)
location: region:63480-66466:-1
so has part: feature:63480-66466:-1:exon
subclass of: SO_0000010

120764780
type: Gene
SIO_000068: ncbigene

position:63480:-1
position: 63480
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:66466:-1
position: 66466
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:63480-66466:-1:exon

LOC120764780
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 43150
gene: LOC120764780
product: zinc finger protein 239-like
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_040088810.2
SIO_010081: LOC120764780
subclass of: SO_0000673
so part of: LOC120764780
location: complement(join(63480..65133,65322..65403,66431..66466))
location: region:63480-66466:-1
so has part: feature:66431-66466:-1:exon
so has part: feature:65322-65403:-1:exon
so has part: feature:63480-65133:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:66431-66466:-1:exon

position:66431:-1
position: 66431
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:65322-65403:-1:exon

position:65322:-1
position: 65322
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:65403:-1
position: 65403
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:63480-65133:-1:exon

position:65133:-1
position: 65133
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC120764780
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 43150
gene: LOC120764780
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger protein 239-like
translation: MAEPGMKRGSPGDFPFPNFGRMEEERAVSKKKMPWDTKADKEPRMETREDKSPRQNLVEEAQESNGEEKPWRSRTRRGSKRTPGSSEEERPTQRQEGGQSSELVVHEQLQQVKKHHQCSECGRSFCTNSRLLRHQMSHTGKRPYECGKCGKGFRDTSDLIRHQRVHTGERPYECGECGKTFTLRSHLLVHQRSHTGEQPYQCGECGKSFSLSSSLIRHQRIHTGEQPHKCEECGKGFLKSCHLKRHQMIHTGIRPFACGECGKSFRDSSGLIMHRTLHTGECPYTCSECGKGFTYHSNLVVHQRTHTGEKAL
SIO_010081: LOC120764780
subclass of: SO_0000673
so part of: LOC120764780
location: complement(join(64313..65133,65322..65403,66431..66466))
location: region:64313-66466:-1
so has part: feature:66431-66466:-1:exon
so has part: feature:65322-65403:-1:exon
so has part: feature:64313-65133:-1:exon

XP_039944744.1
type: Protein
SIO_000068: ncbiprotein

position:64313:-1
position: 64313
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:66431-66466:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:65322-65403:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:64313-65133:-1:exon

QPRT
type: Gene
subclass of: SO_0000704
RO_0002162: 43150
gene: QPRT
note: quinolinate phosphoribosyltransferase; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(110881..113942)
location: region:110881-113942:-1
so has part: feature:110881-113942:-1:exon
subclass of: SO_0000010

120764775
type: Gene
SIO_000068: ncbigene

position:110881:-1
position: 110881
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:113942:-1
position: 113942
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:110881-113942:-1:exon

QPRT
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 43150
gene: QPRT
product: quinolinate phosphoribosyltransferase
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 Proteins
transcript id: XM_040088805.2
SIO_010081: QPRT
subclass of: SO_0000673
so part of: QPRT
location: complement(join(110881..111508,112488..112619,113355..113942))
location: region:110881-113942:-1
so has part: feature:113355-113942:-1:exon
so has part: feature:112488-112619:-1:exon
so has part: feature:110881-111508:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:113355-113942:-1:exon

position:113355:-1
position: 113355
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:112488-112619:-1:exon

position:112488:-1
position: 112488
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:112619:-1
position: 112619
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:110881-111508:-1:exon

position:111508:-1
position: 111508
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

QPRT
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 43150
gene: QPRT
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: nicotinate-nucleotide pyrophosphorylase [carboxylating]
translation: MAGSEPPGRGWAPAPPAHRLRSLARSWLEEDAPWPDAAVAAAGDTATRAHLLSKSGGGSGGVLAGAPFAEAVFGVSGCRVAWRVPEGSALPPGRAVVAEVEGPAAGVLLGERVALNILGRCSGVASMAARAVGVARARGWAGVVGGTRKTTPGFRLAEKYALGVGGADPHRGGLGGLLLLKDNHRALAAAAGGLQQMILGVRRAGGFTRRLGVECSSADEALAAAGAGADIVLLDNLAPQELHAAAALVKAAHPGVTVEASGGIVLETLPQFLGPHIDVVSMGCLTHSAPSLDFALRVLEP
SIO_010081: QPRT
subclass of: SO_0000673
so part of: QPRT
location: complement(join(111323..111508,112488..112619,113355..113942))
location: region:111323-113942:-1
so has part: feature:113355-113942:-1:exon
so has part: feature:112488-112619:-1:exon
so has part: feature:111323-111508:-1:exon

XP_039944739.1
type: Protein
SIO_000068: ncbiprotein

position:111323:-1
position: 111323
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:113355-113942:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:112488-112619:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:111323-111508:-1:exon

LOC120764788
type: Gene
subclass of: SO_0000704
RO_0002162: 43150
gene: LOC120764788
note: small nucleolar RNA SNORD45; Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: complement(137565..137648)
location: region:137565-137648:-1
so has part: feature:137565-137648:-1:exon
subclass of: SO_0000578

120764788
type: Gene
SIO_000068: ncbigene

position:137565:-1
position: 137565
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:137648:-1
position: 137648
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:137565-137648:-1:exon

LOC120764788
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 43150
nc RNA class: snoRNA
gene: LOC120764788
product: small nucleolar RNA SNORD45
inference: COORDINATES: nucleotide motif:Rfam:14.6:RF00279
inference: COORDINATES: profile:INFERNAL:1.1.4
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_005704278.1
SIO_010081: LOC120764788
subclass of: SO_0000673
so part of: LOC120764788
location: complement(137565..137648)
location: region:137565-137648:-1
so has part: feature:137565-137648:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:137565-137648:-1:exon

LOC120764796
type: Gene
subclass of: SO_0000704
RO_0002162: 43150
gene: LOC120764796
note: small nucleolar RNA SNORD45; Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: complement(143599..143682)
location: region:143599-143682:-1
so has part: feature:143599-143682:-1:exon
subclass of: SO_0000578

120764796
type: Gene
SIO_000068: ncbigene

position:143599:-1
position: 143599
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:143682:-1
position: 143682
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:143599-143682:-1:exon

LOC120764796
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 43150
nc RNA class: snoRNA
gene: LOC120764796
product: small nucleolar RNA SNORD45
inference: COORDINATES: nucleotide motif:Rfam:14.6:RF00279
inference: COORDINATES: profile:INFERNAL:1.1.4
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_005704288.1
SIO_010081: LOC120764796
subclass of: SO_0000673
so part of: LOC120764796
location: complement(143599..143682)
location: region:143599-143682:-1
so has part: feature:143599-143682:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:143599-143682:-1:exon

LOC120764789
type: Gene
subclass of: SO_0000704
RO_0002162: 43150
gene: LOC120764789
note: small nucleolar RNA SNORD45; Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: complement(147660..147743)
location: region:147660-147743:-1
so has part: feature:147660-147743:-1:exon
subclass of: SO_0000578

120764789
type: Gene
SIO_000068: ncbigene

position:147660:-1
position: 147660
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:147743:-1
position: 147743
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:147660-147743:-1:exon

LOC120764789
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 43150
nc RNA class: snoRNA
gene: LOC120764789
product: small nucleolar RNA SNORD45
inference: COORDINATES: nucleotide motif:Rfam:14.6:RF00279
inference: COORDINATES: profile:INFERNAL:1.1.4
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_005704279.1
SIO_010081: LOC120764789
subclass of: SO_0000673
so part of: LOC120764789
location: complement(147660..147743)
location: region:147660-147743:-1
so has part: feature:147660-147743:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:147660-147743:-1:exon

LOC120764782
type: Gene
subclass of: SO_0000704
RO_0002162: 43150
gene: LOC120764782
note: medium-chain specific acyl-CoA dehydrogenase, mitochondrial-like; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 152248..164251
location: region:152248-164251:1
so has part: feature:152248-164251:1:exon
subclass of: SO_0000010

120764782
type: Gene
SIO_000068: ncbigene

position:152248:1
position: 152248
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:164251:1
position: 164251
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:152248-164251:1:exon

LOC120764782
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 43150
gene: LOC120764782
product: medium-chain specific acyl-CoA dehydrogenase, mitochondrial-like
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_040088812.2
SIO_010081: LOC120764782
subclass of: SO_0000673
so part of: LOC120764782
location: join(152248..152377,154535..154631,155301..155398,155496..155565,156830..156930,157050..157130,157355..157485,158957..159065,160727..160867,160943..161038,162074..162322,163647..164251)
location: region:152248-164251:1
so has part: feature:152248-152377:1:exon
so has part: feature:154535-154631:1:exon
so has part: feature:155301-155398:1:exon
so has part: feature:155496-155565:1:exon
so has part: feature:156830-156930:1:exon
so has part: feature:157050-157130:1:exon
so has part: feature:157355-157485:1:exon
so has part: feature:158957-159065:1:exon
so has part: feature:160727-160867:1:exon
so has part: feature:160943-161038:1:exon
so has part: feature:162074-162322:1:exon
so has part: feature:163647-164251:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:152248-152377:1:exon

position:152377:1
position: 152377
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:154535-154631:1:exon

position:154535:1
position: 154535
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:154631:1
position: 154631
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:155301-155398:1:exon

position:155301:1
position: 155301
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:155398:1
position: 155398
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:155496-155565:1:exon

position:155496:1
position: 155496
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:155565:1
position: 155565
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:156830-156930:1:exon

position:156830:1
position: 156830
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:156930:1
position: 156930
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:157050-157130:1:exon

position:157050:1
position: 157050
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:157130:1
position: 157130
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:157355-157485:1:exon

position:157355:1
position: 157355
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:157485:1
position: 157485
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:158957-159065:1:exon

position:158957:1
position: 158957
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:159065:1
position: 159065
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:160727-160867:1:exon

position:160727:1
position: 160727
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:160867:1
position: 160867
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:160943-161038:1:exon

position:160943:1
position: 160943
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:161038:1
position: 161038
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:162074-162322:1:exon

position:162074:1
position: 162074
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:162322:1
position: 162322
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:163647-164251:1:exon

position:163647:1
position: 163647
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC120764782
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 43150
gene: LOC120764782
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: medium-chain specific acyl-CoA dehydrogenase, mitochondrial-like
translation: MSALSASRLLRTLVWPGWRLYSSKPAQNVQLSKPGNGFSFELTDEQKEFQATARKFALEEIIPVAAEYDRTGEYPVPLIKRAWELGLMNSHIPESCGGLGLGTFEACLITEELAYGCTGVQTAIEANSLGQMPVIIAGNEQQQKKYLGRMTEAPLMCAYCVTEPGAGSDVAGIRTRAERKGDEYVINGQKMWITNGGKANWYFLLARTDPDPRAPASKAFTGFIVEADSPGIQIGRKELNMGQRCSDTRGIVFEDVRVPKENVLIAEGAGFKIAMGAFDKTRPPVAAGAVGLARRALDEATRYALERKTFGKPIVEHQAVAFLLAEMAMKVELARLGYQRAAWEVDAGRRNTFYASIAKAFAGDVANQVATDAVQIFGGNGFNTEYPVEKLMRDAKIYQIYEGTAQIQRVIIAREHLGRFKA
SIO_010081: LOC120764782
subclass of: SO_0000673
so part of: LOC120764782
location: join(152354..152377,154535..154631,155301..155398,155496..155565,156830..156930,157050..157130,157355..157485,158957..159065,160727..160867,160943..161038,162074..162322,163647..163718)
location: region:152354-163718:1
so has part: feature:152354-152377:1:exon
so has part: feature:154535-154631:1:exon
so has part: feature:155301-155398:1:exon
so has part: feature:155496-155565:1:exon
so has part: feature:156830-156930:1:exon
so has part: feature:157050-157130:1:exon
so has part: feature:157355-157485:1:exon
so has part: feature:158957-159065:1:exon
so has part: feature:160727-160867:1:exon
so has part: feature:160943-161038:1:exon
so has part: feature:162074-162322:1:exon
so has part: feature:163647-163718:1:exon

XP_039944746.1
type: Protein
SIO_000068: ncbiprotein

position:152354:1
position: 152354
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:163718:1
position: 163718
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:152354-152377:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:154535-154631:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:155301-155398:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:155496-155565:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:156830-156930:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:157050-157130:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:157355-157485:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:158957-159065:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:160727-160867:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:160943-161038:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:162074-162322:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:163647-163718:1:exon

LOC120764776
type: Gene
subclass of: SO_0000704
RO_0002162: 43150
gene: LOC120764776
note: uncharacterized LOC120764776; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 165727..168190
location: region:165727-168190:1
so has part: feature:165727-168190:1:exon
subclass of: SO_0000011

120764776
type: Gene
SIO_000068: ncbigene

position:165727:1
position: 165727
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:168190:1
position: 168190
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:165727-168190:1:exon

LOC120764776
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 43150
nc RNA class: lncRNA
gene: LOC120764776
product: uncharacterized LOC120764776
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XR_005704272.1
SIO_010081: LOC120764776
subclass of: SO_0000673
so part of: LOC120764776
location: join(165727..165818,166715..168190)
location: region:165727-168190:1
so has part: feature:165727-165818:1:exon
so has part: feature:166715-168190:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:165727-165818:1:exon

position:165818:1
position: 165818
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:166715-168190:1:exon

position:166715:1
position: 166715
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC120764787
type: Gene
subclass of: SO_0000704
RO_0002162: 43150
gene: LOC120764787
note: small nucleolar RNA SNORD45; Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: 166234..166317
location: region:166234-166317:1
so has part: feature:166234-166317:1:exon
subclass of: SO_0000578

120764787
type: Gene
SIO_000068: ncbigene

position:166234:1
position: 166234
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:166317:1
position: 166317
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:166234-166317:1:exon

LOC120764787
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 43150
nc RNA class: snoRNA
gene: LOC120764787
product: small nucleolar RNA SNORD45
inference: COORDINATES: nucleotide motif:Rfam:14.6:RF00279
inference: COORDINATES: profile:INFERNAL:1.1.4
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_005704277.1
SIO_010081: LOC120764787
subclass of: SO_0000673
so part of: LOC120764787
location: 166234..166317
location: region:166234-166317:1
so has part: feature:166234-166317:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:166234-166317:1:exon

LOC120764793
type: Gene
subclass of: SO_0000704
RO_0002162: 43150
gene: LOC120764793
note: small nucleolar RNA SNORD45; Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: 170402..170485
location: region:170402-170485:1
so has part: feature:170402-170485:1:exon
subclass of: SO_0000578

120764793
type: Gene
SIO_000068: ncbigene

position:170402:1
position: 170402
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:170485:1
position: 170485
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:170402-170485:1:exon

LOC120764793
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 43150
nc RNA class: snoRNA
gene: LOC120764793
product: small nucleolar RNA SNORD45
inference: COORDINATES: nucleotide motif:Rfam:14.6:RF00279
inference: COORDINATES: profile:INFERNAL:1.1.4
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_005704284.1
SIO_010081: LOC120764793
subclass of: SO_0000673
so part of: LOC120764793
location: 170402..170485
location: region:170402-170485:1
so has part: feature:170402-170485:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:170402-170485:1:exon

LOC120764794
type: Gene
subclass of: SO_0000704
RO_0002162: 43150
gene: LOC120764794
note: small nucleolar RNA SNORD45; Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: 178166..178249
location: region:178166-178249:1
so has part: feature:178166-178249:1:exon
subclass of: SO_0000578

120764794
type: Gene
SIO_000068: ncbigene

position:178166:1
position: 178166
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:178249:1
position: 178249
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:178166-178249:1:exon

LOC120764794
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 43150
nc RNA class: snoRNA
gene: LOC120764794
product: small nucleolar RNA SNORD45
inference: COORDINATES: nucleotide motif:Rfam:14.6:RF00279
inference: COORDINATES: profile:INFERNAL:1.1.4
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_005704285.1
SIO_010081: LOC120764794
subclass of: SO_0000673
so part of: LOC120764794
location: 178166..178249
location: region:178166-178249:1
so has part: feature:178166-178249:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:178166-178249:1:exon

LOC120764790
type: Gene
subclass of: SO_0000704
RO_0002162: 43150
gene: LOC120764790
note: small nucleolar RNA SNORD45; Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: 182249..182332
location: region:182249-182332:1
so has part: feature:182249-182332:1:exon
subclass of: SO_0000578

120764790
type: Gene
SIO_000068: ncbigene

position:182249:1
position: 182249
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:182332:1
position: 182332
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:182249-182332:1:exon

LOC120764790
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 43150
nc RNA class: snoRNA
gene: LOC120764790
product: small nucleolar RNA SNORD45
inference: COORDINATES: nucleotide motif:Rfam:14.6:RF00279
inference: COORDINATES: profile:INFERNAL:1.1.4
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_005704281.1
SIO_010081: LOC120764790
subclass of: SO_0000673
so part of: LOC120764790
location: 182249..182332
location: region:182249-182332:1
so has part: feature:182249-182332:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:182249-182332:1:exon

LOC120764795
type: Gene
subclass of: SO_0000704
RO_0002162: 43150
gene: LOC120764795
note: small nucleolar RNA SNORD45; Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: 186287..186370
location: region:186287-186370:1
so has part: feature:186287-186370:1:exon
subclass of: SO_0000578

120764795
type: Gene
SIO_000068: ncbigene

position:186287:1
position: 186287
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:186370:1
position: 186370
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:186287-186370:1:exon

LOC120764795
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 43150
nc RNA class: snoRNA
gene: LOC120764795
product: small nucleolar RNA SNORD45
inference: COORDINATES: nucleotide motif:Rfam:14.6:RF00279
inference: COORDINATES: profile:INFERNAL:1.1.4
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_005704287.1
SIO_010081: LOC120764795
subclass of: SO_0000673
so part of: LOC120764795
location: 186287..186370
location: region:186287-186370:1
so has part: feature:186287-186370:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:186287-186370:1:exon

LOC120764791
type: Gene
subclass of: SO_0000704
RO_0002162: 43150
gene: LOC120764791
note: small nucleolar RNA SNORD45; Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: 190511..190594
location: region:190511-190594:1
so has part: feature:190511-190594:1:exon
subclass of: SO_0000578

120764791
type: Gene
SIO_000068: ncbigene

position:190511:1
position: 190511
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:190594:1
position: 190594
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:190511-190594:1:exon

LOC120764791
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 43150
nc RNA class: snoRNA
gene: LOC120764791
product: small nucleolar RNA SNORD45
inference: COORDINATES: nucleotide motif:Rfam:14.6:RF00279
inference: COORDINATES: profile:INFERNAL:1.1.4
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_005704282.1
SIO_010081: LOC120764791
subclass of: SO_0000673
so part of: LOC120764791
location: 190511..190594
location: region:190511-190594:1
so has part: feature:190511-190594:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:190511-190594:1:exon

LOC120764784
type: Gene
subclass of: SO_0000704
RO_0002162: 43150
gene: LOC120764784
note: antigen peptide transporter 2-like; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 194246..249736
location: region:194246-249736:1
so has part: feature:194246-249736:1:exon
subclass of: SO_0000010

120764784
type: Gene
SIO_000068: ncbigene

position:194246:1
position: 194246
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:249736:1
position: 249736
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:194246-249736:1:exon

LOC120764784
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 43150
gene: LOC120764784
product: antigen peptide transporter 2-like, transcript variant X1
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_040088816.2
SIO_010081: LOC120764784
subclass of: SO_0000673
so part of: LOC120764784
location: join(194246..194294,195053..195144,242477..242508,242988..243572,244177..244285,244363..244493,244925..245130,245727..245924,246338..246466,246547..246735,246804..246977,247454..247613,248008..248135,248782..249736)
location: region:194246-249736:1
so has part: feature:194246-194294:1:exon
so has part: feature:195053-195144:1:exon
so has part: feature:242477-242508:1:exon
so has part: feature:242988-243572:1:exon
so has part: feature:244177-244285:1:exon
so has part: feature:244363-244493:1:exon
so has part: feature:244925-245130:1:exon
so has part: feature:245727-245924:1:exon
so has part: feature:246338-246466:1:exon
so has part: feature:246547-246735:1:exon
so has part: feature:246804-246977:1:exon
so has part: feature:247454-247613:1:exon
so has part: feature:248008-248135:1:exon
so has part: feature:248782-249736:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:194246-194294:1:exon

position:194294:1
position: 194294
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:195053-195144:1:exon

position:195053:1
position: 195053
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:195144:1
position: 195144
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:242477-242508:1:exon

position:242477:1
position: 242477
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:242508:1
position: 242508
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:242988-243572:1:exon

position:242988:1
position: 242988
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:243572:1
position: 243572
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:244177-244285:1:exon

position:244177:1
position: 244177
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:244285:1
position: 244285
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:244363-244493:1:exon

position:244363:1
position: 244363
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:244493:1
position: 244493
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:244925-245130:1:exon

position:244925:1
position: 244925
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:245130:1
position: 245130
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:245727-245924:1:exon

position:245727:1
position: 245727
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:245924:1
position: 245924
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:246338-246466:1:exon

position:246338:1
position: 246338
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:246466:1
position: 246466
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:246547-246735:1:exon

position:246547:1
position: 246547
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:246735:1
position: 246735
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:246804-246977:1:exon

position:246804:1
position: 246804
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:246977:1
position: 246977
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:247454-247613:1:exon

position:247454:1
position: 247454
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:247613:1
position: 247613
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:248008-248135:1:exon

position:248008:1
position: 248008
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:248135:1
position: 248135
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:248782-249736:1:exon

position:248782:1
position: 248782
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC120764784
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 43150
gene: LOC120764784
product: antigen peptide transporter 2-like, transcript variant X3
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_040088818.2
SIO_010081: LOC120764784
subclass of: SO_0000673
so part of: LOC120764784
location: join(194266..194294,195053..195144,242988..243572,244177..244285,244363..244493,244925..245130,245727..245924,246338..246466,246547..246735,246804..246977,247454..247613,248008..248135,248782..249736)
location: region:194266-249736:1
so has part: feature:194266-194294:1:exon
so has part: feature:195053-195144:1:exon
so has part: feature:242988-243572:1:exon
so has part: feature:244177-244285:1:exon
so has part: feature:244363-244493:1:exon
so has part: feature:244925-245130:1:exon
so has part: feature:245727-245924:1:exon
so has part: feature:246338-246466:1:exon
so has part: feature:246547-246735:1:exon
so has part: feature:246804-246977:1:exon
so has part: feature:247454-247613:1:exon
so has part: feature:248008-248135:1:exon
so has part: feature:248782-249736:1:exon

position:194266:1
position: 194266
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:194266-194294:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:195053-195144:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:242988-243572:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:244177-244285:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:244363-244493:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:244925-245130:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:245727-245924:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:246338-246466:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:246547-246735:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:246804-246977:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:247454-247613:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:248008-248135:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:248782-249736:1:exon

LOC120764792
type: Gene
subclass of: SO_0000704
RO_0002162: 43150
gene: LOC120764792
note: small nucleolar RNA SNORD45; Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: 194572..194655
location: region:194572-194655:1
so has part: feature:194572-194655:1:exon
subclass of: SO_0000578

120764792
type: Gene
SIO_000068: ncbigene

position:194572:1
position: 194572
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:194655:1
position: 194655
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:194572-194655:1:exon

LOC120764792
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 43150
nc RNA class: snoRNA
gene: LOC120764792
product: small nucleolar RNA SNORD45
inference: COORDINATES: nucleotide motif:Rfam:14.6:RF00279
inference: COORDINATES: profile:INFERNAL:1.1.4
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_005704283.1
SIO_010081: LOC120764792
subclass of: SO_0000673
so part of: LOC120764792
location: 194572..194655
location: region:194572-194655:1
so has part: feature:194572-194655:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:194572-194655:1:exon

LOC120764784
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 43150
gene: LOC120764784
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: antigen peptide transporter 2-like isoform X1
translation: MIQHFGESPGLQVLVGCERGTELGALVWTGCRSSPGSHTRSATLVCTGPAMALPSAGLLPGLLLVADALTLVLLVPLVPVLASLGVAGVWLEAALRLPVLAVATWLLPRRGPSGATSAAVTVAITPAAFGTLRYLLGPPGAGTGLLVAATPAWLGVTHAAAALALLAWAVPPAPGGITETPGDVTETPGAVPKAPGTLRRALALTWEERKVLGAAFLCLVLAAVGETLAPYATGKVLDAIGSGDGLTAGAIGMVAAAGTTSVLFSGCRGAFFLLLKARLHRILSLRLFSHVVHQDLDFFQGVSAAELLAQFSVEVPRVCETAPKGANQLFRSLGMALVVGAFMVGLAPGLALLALLELPLGIANHRIQSARKQSLQQSMLEASARTASGVQESVAAMETIRIFSAEEEEEEQHSWNLAKELRLRERIDLELAFFTLVHRVIELTIRVLVLFRSHQLLRDGYITPGVLVTFLLYQDTVGSHVQVLLSGFNESVTNAAAGRKIWEYLDRKPTGNVRGTREPPELQGHVTFQKVSFAYPGNPEQPVLKDVTFEVRSGEVTALVGHNGSGKSTTVALLERLRDPGSGKILLDGIPLPEYEHQYLHRKVVLVEQDPVLFSGTIRENVMLGLENCKESELREAAIAAGAMDFIQGLEQGWDTEVGERGGRLAAGERRRVALARALLRRPAVLILDESLDDGDEGAAQRWLRTGLARTVLVVSHRPRVLDVADRLVVLDHGAVVETGTPAELRERCGVYSRLLLGGGRTGGPEAPNMGSEKGAALGRE
SIO_010081: LOC120764784
subclass of: SO_0000673
so part of: LOC120764784
location: join(195089..195144,242477..242508,242988..243572,244177..244285,244363..244493,244925..245130,245727..245924,246338..246466,246547..246735,246804..246977,247454..247613,248008..248135,248782..249030)
location: region:195089-249030:1
so has part: feature:195089-195144:1:exon
so has part: feature:242477-242508:1:exon
so has part: feature:242988-243572:1:exon
so has part: feature:244177-244285:1:exon
so has part: feature:244363-244493:1:exon
so has part: feature:244925-245130:1:exon
so has part: feature:245727-245924:1:exon
so has part: feature:246338-246466:1:exon
so has part: feature:246547-246735:1:exon
so has part: feature:246804-246977:1:exon
so has part: feature:247454-247613:1:exon
so has part: feature:248008-248135:1:exon
so has part: feature:248782-249030:1:exon

XP_039944750.1
type: Protein
SIO_000068: ncbiprotein

position:195089:1
position: 195089
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:249030:1
position: 249030
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:195089-195144:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:242477-242508:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:242988-243572:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:244177-244285:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:244363-244493:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:244925-245130:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:245727-245924:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:246338-246466:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:246547-246735:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:246804-246977:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:247454-247613:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:248008-248135:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:248782-249030:1:exon

LOC120764783
type: Gene
subclass of: SO_0000704
RO_0002162: 43150
gene: LOC120764783
note: tenascin-X-like; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(197779..219759)
location: region:197779-219759:-1
so has part: feature:197779-219759:-1:exon
subclass of: SO_0000010

120764783
type: Gene
SIO_000068: ncbigene

position:197779:-1
position: 197779
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:219759:-1
position: 219759
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:197779-219759:-1:exon

LOC120764783
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 43150
gene: LOC120764783
product: tenascin-X-like, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins
transcript id: XM_040088813.2
SIO_010081: LOC120764783
subclass of: SO_0000673
so part of: LOC120764783
location: complement(join(197779..197928,198295..198491,199120..199281,199782..199878,200130..200281,201155..201287,201558..201682,203155..203526,204720..205091,205770..206126,206259..206651,207394..207750,209162..209503,209949..210323,211038..211418,212158..212514,213090..213446,213813..214157,214784..215140,215984..216316,216912..217265,217767..218123,218606..218962,219453..219759))
location: region:197779-219759:-1
so has part: feature:219453-219759:-1:exon
so has part: feature:218606-218962:-1:exon
so has part: feature:217767-218123:-1:exon
so has part: feature:216912-217265:-1:exon
so has part: feature:215984-216316:-1:exon
so has part: feature:214784-215140:-1:exon
so has part: feature:213813-214157:-1:exon
so has part: feature:213090-213446:-1:exon
so has part: feature:212158-212514:-1:exon
so has part: feature:211038-211418:-1:exon
so has part: feature:209949-210323:-1:exon
so has part: feature:209162-209503:-1:exon
so has part: feature:207394-207750:-1:exon
so has part: feature:206259-206651:-1:exon
so has part: feature:205770-206126:-1:exon
so has part: feature:204720-205091:-1:exon
so has part: feature:203155-203526:-1:exon
so has part: feature:201558-201682:-1:exon
so has part: feature:201155-201287:-1:exon
so has part: feature:200130-200281:-1:exon
so has part: feature:199782-199878:-1:exon
so has part: feature:199120-199281:-1:exon
so has part: feature:198295-198491:-1:exon
so has part: feature:197779-197928:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:219453-219759:-1:exon

position:219453:-1
position: 219453
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:218606-218962:-1:exon

position:218606:-1
position: 218606
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:218962:-1
position: 218962
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:217767-218123:-1:exon

position:217767:-1
position: 217767
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:218123:-1
position: 218123
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:216912-217265:-1:exon

position:216912:-1
position: 216912
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:217265:-1
position: 217265
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:215984-216316:-1:exon

position:215984:-1
position: 215984
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:216316:-1
position: 216316
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:214784-215140:-1:exon

position:214784:-1
position: 214784
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:215140:-1
position: 215140
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:213813-214157:-1:exon

position:213813:-1
position: 213813
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:214157:-1
position: 214157
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:213090-213446:-1:exon

position:213090:-1
position: 213090
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:213446:-1
position: 213446
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:212158-212514:-1:exon

position:212158:-1
position: 212158
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:212514:-1
position: 212514
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:211038-211418:-1:exon

position:211038:-1
position: 211038
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:211418:-1
position: 211418
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:209949-210323:-1:exon

position:209949:-1
position: 209949
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:210323:-1
position: 210323
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:209162-209503:-1:exon

position:209162:-1
position: 209162
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:209503:-1
position: 209503
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:207394-207750:-1:exon

position:207394:-1
position: 207394
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:207750:-1
position: 207750
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:206259-206651:-1:exon

position:206259:-1
position: 206259
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:206651:-1
position: 206651
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:205770-206126:-1:exon

position:205770:-1
position: 205770
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:206126:-1
position: 206126
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:204720-205091:-1:exon

position:204720:-1
position: 204720
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:205091:-1
position: 205091
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:203155-203526:-1:exon

position:203155:-1
position: 203155
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:203526:-1
position: 203526
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:201558-201682:-1:exon

position:201558:-1
position: 201558
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:201682:-1
position: 201682
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:201155-201287:-1:exon

position:201155:-1
position: 201155
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:201287:-1
position: 201287
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:200130-200281:-1:exon

position:200130:-1
position: 200130
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:200281:-1
position: 200281
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:199782-199878:-1:exon

position:199782:-1
position: 199782
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:199878:-1
position: 199878
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:199120-199281:-1:exon

position:199120:-1
position: 199120
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:199281:-1
position: 199281
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:198295-198491:-1:exon

position:198295:-1
position: 198295
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:198491:-1
position: 198491
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:197779-197928:-1:exon

position:197928:-1
position: 197928
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC120764783
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 43150
gene: LOC120764783
product: tenascin-X-like, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins
transcript id: XM_058423863.1
SIO_010081: LOC120764783
subclass of: SO_0000673
so part of: LOC120764783
location: complement(join(197779..197928,198295..198491,199120..199281,199782..199878,200130..200281,201155..201287,201558..201682,203155..203526,204720..205091,205770..206126,206259..206651,207394..207750,209162..209503,209949..210323,211038..211418,212158..212514,213090..213446,213813..214157,214784..215137,215984..216316,216912..217268,217767..218123,218606..218962,219453..219759))
location: region:197779-219759:-1
so has part: feature:219453-219759:-1:exon
so has part: feature:218606-218962:-1:exon
so has part: feature:217767-218123:-1:exon
so has part: feature:216912-217268:-1:exon
so has part: feature:215984-216316:-1:exon
so has part: feature:214784-215137:-1:exon
so has part: feature:213813-214157:-1:exon
so has part: feature:213090-213446:-1:exon
so has part: feature:212158-212514:-1:exon
so has part: feature:211038-211418:-1:exon
so has part: feature:209949-210323:-1:exon
so has part: feature:209162-209503:-1:exon
so has part: feature:207394-207750:-1:exon
so has part: feature:206259-206651:-1:exon
so has part: feature:205770-206126:-1:exon
so has part: feature:204720-205091:-1:exon
so has part: feature:203155-203526:-1:exon
so has part: feature:201558-201682:-1:exon
so has part: feature:201155-201287:-1:exon
so has part: feature:200130-200281:-1:exon
so has part: feature:199782-199878:-1:exon
so has part: feature:199120-199281:-1:exon
so has part: feature:198295-198491:-1:exon
so has part: feature:197779-197928:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:219453-219759:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:218606-218962:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:217767-218123:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:216912-217268:-1:exon

position:217268:-1
position: 217268
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:215984-216316:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:214784-215137:-1:exon

position:215137:-1
position: 215137
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:213813-214157:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:213090-213446:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:212158-212514:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:211038-211418:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:209949-210323:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:209162-209503:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:207394-207750:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:206259-206651:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:205770-206126:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:204720-205091:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:203155-203526:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:201558-201682:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:201155-201287:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:200130-200281:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:199782-199878:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:199120-199281:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:198295-198491:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:197779-197928:-1:exon

LOC120764783
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 43150
gene: LOC120764783
product: tenascin-X-like, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins
transcript id: XM_058423865.1
SIO_010081: LOC120764783
subclass of: SO_0000673
so part of: LOC120764783
location: complement(join(197779..197928,198295..198491,199120..199281,199782..199878,200130..200281,201155..201287,201558..201682,203155..203526,204720..205091,205770..206126,206259..206651,207394..207750,209162..209503,209949..210323,211038..211418,212170..212514,213090..213446,213813..214157,214784..215140,215984..216316,216912..217268,217767..218123,218606..218962,219453..219759))
location: region:197779-219759:-1
so has part: feature:219453-219759:-1:exon
so has part: feature:218606-218962:-1:exon
so has part: feature:217767-218123:-1:exon
so has part: feature:216912-217268:-1:exon
so has part: feature:215984-216316:-1:exon
so has part: feature:214784-215140:-1:exon
so has part: feature:213813-214157:-1:exon
so has part: feature:213090-213446:-1:exon
so has part: feature:212170-212514:-1:exon
so has part: feature:211038-211418:-1:exon
so has part: feature:209949-210323:-1:exon
so has part: feature:209162-209503:-1:exon
so has part: feature:207394-207750:-1:exon
so has part: feature:206259-206651:-1:exon
so has part: feature:205770-206126:-1:exon
so has part: feature:204720-205091:-1:exon
so has part: feature:203155-203526:-1:exon
so has part: feature:201558-201682:-1:exon
so has part: feature:201155-201287:-1:exon
so has part: feature:200130-200281:-1:exon
so has part: feature:199782-199878:-1:exon
so has part: feature:199120-199281:-1:exon
so has part: feature:198295-198491:-1:exon
so has part: feature:197779-197928:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:219453-219759:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:218606-218962:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:217767-218123:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:216912-217268:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:215984-216316:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:214784-215140:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:213813-214157:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:213090-213446:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:212170-212514:-1:exon

position:212170:-1
position: 212170
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:211038-211418:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:209949-210323:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:209162-209503:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:207394-207750:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:206259-206651:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:205770-206126:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:204720-205091:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:203155-203526:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:201558-201682:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:201155-201287:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:200130-200281:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:199782-199878:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:199120-199281:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:198295-198491:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:197779-197928:-1:exon

LOC120764783
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 43150
gene: LOC120764783
product: tenascin-X-like, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins
transcript id: XM_058423864.1
SIO_010081: LOC120764783
subclass of: SO_0000673
so part of: LOC120764783
location: complement(join(197779..197928,198295..198491,199120..199281,199782..199878,200130..200281,201155..201287,201558..201682,203155..203526,204720..205091,205770..206126,206259..206651,207394..207750,209162..209503,209949..210320,211038..211418,212158..212514,213090..213446,213813..214157,214784..215140,215984..216316,216912..217268,217767..218123,218606..218962,219453..219759))
location: region:197779-219759:-1
so has part: feature:219453-219759:-1:exon
so has part: feature:218606-218962:-1:exon
so has part: feature:217767-218123:-1:exon
so has part: feature:216912-217268:-1:exon
so has part: feature:215984-216316:-1:exon
so has part: feature:214784-215140:-1:exon
so has part: feature:213813-214157:-1:exon
so has part: feature:213090-213446:-1:exon
so has part: feature:212158-212514:-1:exon
so has part: feature:211038-211418:-1:exon
so has part: feature:209949-210320:-1:exon
so has part: feature:209162-209503:-1:exon
so has part: feature:207394-207750:-1:exon
so has part: feature:206259-206651:-1:exon
so has part: feature:205770-206126:-1:exon
so has part: feature:204720-205091:-1:exon
so has part: feature:203155-203526:-1:exon
so has part: feature:201558-201682:-1:exon
so has part: feature:201155-201287:-1:exon
so has part: feature:200130-200281:-1:exon
so has part: feature:199782-199878:-1:exon
so has part: feature:199120-199281:-1:exon
so has part: feature:198295-198491:-1:exon
so has part: feature:197779-197928:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:219453-219759:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:218606-218962:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:217767-218123:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:216912-217268:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:215984-216316:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:214784-215140:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:213813-214157:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:213090-213446:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:212158-212514:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:211038-211418:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:209949-210320:-1:exon

position:210320:-1
position: 210320
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:209162-209503:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:207394-207750:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:206259-206651:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:205770-206126:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:204720-205091:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:203155-203526:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:201558-201682:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:201155-201287:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:200130-200281:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:199782-199878:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:199120-199281:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:198295-198491:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:197779-197928:-1:exon

LOC120764783
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 43150
gene: LOC120764783
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tenascin-X-like isoform X3
translation: MLQYRDAQGQPQALPIDGTSRSVTVPGLAPSHRYRFHLYGLRGKKKINHVSTEAVTAGDEPEEQPLSTEEPQHEKPQTEAPASEAPPTTAVLEELRVSSITPSSVQLQWSVPRGSFDSFMLQYRDAQGQPQALPIDGTSRSVTVPGLSPSRRYRFHLYGLRGKKKINHVSTEAVTAGDEPEEQPLSTEEPQHEKPQTEAPASEAPPTMAVLEELRVSSITPNSVQLQWSVPRGSFDSFMLQYRDAQGQPQALPIDGTSRSVTVPGLSPSRRYRFHLYGLRGKKKINHVSTEAVTGDEPEEQPLSTEEPQHEKPQTEAPASEAPPTMAVLEELRVSSITPNSVQLQWSVPRGSFDSFMLQYRDAQGQPQALPIDGTSRSVTVPGLSPSHRYRFHLYGLHGAKRIDRVSTDTVTASEEPLPSEEPQEEKPKTEAPASVLAVLEELKVSSVTPNSVQLQWSVPKGSFDSFMLQYRDAQGQPQALPIDGGSRSVTVPGLSPSHRYRFHLYGLRGKKKINHVSTEAVTAGDEPEEQPLSTEEPQHKKPQTEAPASEATPTTAVLEELRVSSVTPSSVQLQWSVPRGSFDSFMLQYRDAQGQPQALPIDGTSRSVTVPGLSPSHRYRFHLYGLRGKKKINHVSTEAVTASEEPLPSEEPQQEKPKTEAPASETLPMRGVLEELKVSSVTPNSVQLQWSVPKGSFDSFMLQYRDDQDQPQALPIDGTSRSVTVPGLSPSHRYRFHLYGLWGKKKINHVSTEAVTAGEEPEEQPLSTEEPQHEKPQTEAPASEAPPTTAVLEELRVSSITPNSVQLQWSVPRGSFDSFMLQYRDAQGQPQALPIDGTSRSVTVPGLSPSHRYRFHLYGLHGGKRTDRVSTDTVTASGEPLHLEEPQQETPKPESPASEALPVRAVLEELKVSSVTPNSVVLQWSVPEGSFDSFMLQYRDAQGQPQALPIDGGSRSVTVPGLSPSHRYRFHLYGLRGKKRTDRVSTDVVTGGEEADLEDLPSASMDTPNEVSRTEAPRAEDHKPEHPRTEAPSARAVLGELKVSSITPDSVGLQWSVPEGPFDSFMLQYQDAQGQPQALPLDGGLRLVTVPGLSPSHRYRFHLYGIHRGERTDHVSIDVITAATDEPEQPPLPSEKPQTEALPTEDNQSEHLQSEVPLVQAVLGELKVSSVTPDSVQLQWSIPKGSFDSFMLQYRDVHGQPQALPISGESHSVTVPGLSPSHRYRFHLYGLQGGKRIDRVSTDIVTAAAKQEELPLPSEEPETEAISSDALPARAVLGELKVSSVTPNSVQLQWTVPESPFDSFVLQYRDAQGQPHALPIDGRSRSVTVPGLSPSRQYRFHLYGLQGGKRTDHVSTDVVTDAAVPEQLPLPSEEPQPEDHKPEQPQTEASQGQAALGKLRVSSVTPNSVQLQWSVPEGSFDSFMLQYRDAQGQPQALPIDGTSRSVTVPGLSPSHRYRFHLYGLRGKKRTDRVSTDVVTADPEALPSPSMDTPTESPAAEDHQTAHPQAEAPPSESPSARAVLGELKVSSITPDSVGLQWSVPEGRFDSFTLQYRDAQGQPQALPIDGGSRSVTVPGLSPSHRYRFHLYGLRGGKKIDHVSSDVVTADREAAAVPEELLLPSEEPQAERRQTEAHPSATTPARAVLGELKVSGVTSDSVQLQWSVPKGSFDSFTLQYRDAQGQPQALPIDGGSRSVTVPGLSPSRRYRFHLYGLQGGKRVHHTSNEAVTAAANLDEPPMPPEELQPEDTQPKDPPVKSPSTDAPLAQAVLEDLRVSSVTPSSVQLQWSVPRGSFDSFMLQYRDAQGQPQALPIDGTSRSVMVPGLSPSRRYRFHLYGLQGGKRTDRVSTDIVTATAKTEELPLPSEEPQPEDPKGKDPSTEATPSEAPPARAVLGELKVSSITPNSAQLQWSVPEGPFDSFTLQYRDAQGQPQALPIDGTSRSVTVPGLSPSHRYRFHLYGLRGGKRIDHVSTEAITGAPGTLWVGSVWPRSAWLHWDP…
SIO_010081: LOC120764783
subclass of: SO_0000673
so part of: LOC120764783
location: complement(join(197848..197928,198295..198491,199120..199281,199782..199878,200130..200281,201155..201287,201558..201682,203155..203526,204720..205091,205770..206126,206259..206651,207394..207750,209162..209503,209949..210323,211038..211418,212158..212514,213090..213446,213813..214157,214784..215140,215984..216316,216912..217265,217767..218123,218606..218962,219453..219621))
location: region:197848-219621:-1
so has part: feature:219453-219621:-1:exon
so has part: feature:218606-218962:-1:exon
so has part: feature:217767-218123:-1:exon
so has part: feature:216912-217265:-1:exon
so has part: feature:215984-216316:-1:exon
so has part: feature:214784-215140:-1:exon
so has part: feature:213813-214157:-1:exon
so has part: feature:213090-213446:-1:exon
so has part: feature:212158-212514:-1:exon
so has part: feature:211038-211418:-1:exon
so has part: feature:209949-210323:-1:exon
so has part: feature:209162-209503:-1:exon
so has part: feature:207394-207750:-1:exon
so has part: feature:206259-206651:-1:exon
so has part: feature:205770-206126:-1:exon
so has part: feature:204720-205091:-1:exon
so has part: feature:203155-203526:-1:exon
so has part: feature:201558-201682:-1:exon
so has part: feature:201155-201287:-1:exon
so has part: feature:200130-200281:-1:exon
so has part: feature:199782-199878:-1:exon
so has part: feature:199120-199281:-1:exon
so has part: feature:198295-198491:-1:exon
so has part: feature:197848-197928:-1:exon

XP_039944747.1
type: Protein
SIO_000068: ncbiprotein

position:197848:-1
position: 197848
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:219621:-1
position: 219621
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:219453-219621:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:218606-218962:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:217767-218123:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:216912-217265:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:215984-216316:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:214784-215140:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:213813-214157:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:213090-213446:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:212158-212514:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:211038-211418:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:209949-210323:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:209162-209503:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:207394-207750:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:206259-206651:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:205770-206126:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:204720-205091:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:203155-203526:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:201558-201682:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:201155-201287:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:200130-200281:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:199782-199878:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:199120-199281:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:198295-198491:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:197848-197928:-1:exon

LOC120764783
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 43150
gene: LOC120764783
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tenascin-X-like isoform X1
translation: MLQYRDAQGQPQALPIDGTSRSVTVPGLAPSHRYRFHLYGLRGKKKINHVSTEAVTAGDEPEEQPLSTEEPQHEKPQTEAPASEAPPTTAVLEELRVSSITPSSVQLQWSVPRGSFDSFMLQYRDAQGQPQALPIDGTSRSVTVPGLSPSRRYRFHLYGLRGKKKINHVSTEAVTAGDEPEEQPLSTEEPQHEKPQTEAPASEAPPTMAVLEELRVSSITPNSVQLQWSVPRGSFDSFMLQYRDAQGQPQALPIDGTSRSVTVPGLSPSRRYRFHLYGLRGKKKINHVSTEAVTAGDEPEEQPLSTEEPQHEKPQTEAPASEAPPTMAVLEELRVSSITPNSVQLQWSVPRGSFDSFMLQYRDAQGQPQALPIDGTSRSVTVPGLSPSHRYRFHLYGLHGAKRIDRVSTDTVTASEEPLPSEEPQEEKPKTEAPASVLAVLEELKVSSVTPNSVQLQWSVPKGSFDSFMLQYRDAQGQPQALPIDGGSRSVTVPGLSPSHRYRFHLYGLRGKKKINHVSTEAVTGDEPEEQPLSTEEPQHKKPQTEAPASEATPTTAVLEELRVSSVTPSSVQLQWSVPRGSFDSFMLQYRDAQGQPQALPIDGTSRSVTVPGLSPSHRYRFHLYGLRGKKKINHVSTEAVTASEEPLPSEEPQQEKPKTEAPASETLPMRGVLEELKVSSVTPNSVQLQWSVPKGSFDSFMLQYRDDQDQPQALPIDGTSRSVTVPGLSPSHRYRFHLYGLWGKKKINHVSTEAVTAGEEPEEQPLSTEEPQHEKPQTEAPASEAPPTTAVLEELRVSSITPNSVQLQWSVPRGSFDSFMLQYRDAQGQPQALPIDGTSRSVTVPGLSPSHRYRFHLYGLHGGKRTDRVSTDTVTASGEPLHLEEPQQETPKPESPASEALPVRAVLEELKVSSVTPNSVVLQWSVPEGSFDSFMLQYRDAQGQPQALPIDGGSRSVTVPGLSPSHRYRFHLYGLRGKKRTDRVSTDVVTGGEEADLEDLPSASMDTPNEVSRTEAPRAEDHKPEHPRTEAPSARAVLGELKVSSITPDSVGLQWSVPEGPFDSFMLQYQDAQGQPQALPLDGGLRLVTVPGLSPSHRYRFHLYGIHRGERTDHVSIDVITAATDEPEQPPLPSEKPQTEALPTEDNQSEHLQSEVPLVQAVLGELKVSSVTPDSVQLQWSIPKGSFDSFMLQYRDVHGQPQALPISGESHSVTVPGLSPSHRYRFHLYGLQGGKRIDRVSTDIVTAAAKQEELPLPSEEPETEAISSDALPARAVLGELKVSSVTPNSVQLQWTVPESPFDSFVLQYRDAQGQPHALPIDGRSRSVTVPGLSPSRQYRFHLYGLQGGKRTDHVSTDVVTDAAVPEQLPLPSEEPQPEDHKPEQPQTEASQGQAALGKLRVSSVTPNSVQLQWSVPEGSFDSFMLQYRDAQGQPQALPIDGTSRSVTVPGLSPSHRYRFHLYGLRGKKRTDRVSTDVVTADPEALPSPSMDTPTESPAAEDHQTAHPQAEAPPSESPSARAVLGELKVSSITPDSVGLQWSVPEGRFDSFTLQYRDAQGQPQALPIDGGSRSVTVPGLSPSHRYRFHLYGLRGGKKIDHVSSDVVTADREAAAVPEELLLPSEEPQAERRQTEAHPSATTPARAVLGELKVSGVTSDSVQLQWSVPKGSFDSFTLQYRDAQGQPQALPIDGGSRSVTVPGLSPSRRYRFHLYGLQGGKRVHHTSNEAVTAAANLDEPPMPPEELQPEDTQPKDPPVKSPSTDAPLAQAVLEDLRVSSVTPSSVQLQWSVPRGSFDSFMLQYRDAQGQPQALPIDGTSRSVMVPGLSPSRRYRFHLYGLQGGKRTDRVSTDIVTATAKTEELPLPSEEPQPEDPKGKDPSTEATPSEAPPARAVLGELKVSSITPNSAQLQWSVPEGPFDSFTLQYRDAQGQPQALPIDGTSRSVTVPGLSPSHRYRFHLYGLRGGKRIDHVSTEAITGAPGTLWVGSVWPRSAWLHWDP…
SIO_010081: LOC120764783
subclass of: SO_0000673
so part of: LOC120764783
location: complement(join(197848..197928,198295..198491,199120..199281,199782..199878,200130..200281,201155..201287,201558..201682,203155..203526,204720..205091,205770..206126,206259..206651,207394..207750,209162..209503,209949..210323,211038..211418,212158..212514,213090..213446,213813..214157,214784..215137,215984..216316,216912..217268,217767..218123,218606..218962,219453..219621))
location: region:197848-219621:-1
so has part: feature:219453-219621:-1:exon
so has part: feature:218606-218962:-1:exon
so has part: feature:217767-218123:-1:exon
so has part: feature:216912-217268:-1:exon
so has part: feature:215984-216316:-1:exon
so has part: feature:214784-215137:-1:exon
so has part: feature:213813-214157:-1:exon
so has part: feature:213090-213446:-1:exon
so has part: feature:212158-212514:-1:exon
so has part: feature:211038-211418:-1:exon
so has part: feature:209949-210323:-1:exon
so has part: feature:209162-209503:-1:exon
so has part: feature:207394-207750:-1:exon
so has part: feature:206259-206651:-1:exon
so has part: feature:205770-206126:-1:exon
so has part: feature:204720-205091:-1:exon
so has part: feature:203155-203526:-1:exon
so has part: feature:201558-201682:-1:exon
so has part: feature:201155-201287:-1:exon
so has part: feature:200130-200281:-1:exon
so has part: feature:199782-199878:-1:exon
so has part: feature:199120-199281:-1:exon
so has part: feature:198295-198491:-1:exon
so has part: feature:197848-197928:-1:exon

XP_058279846.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:219453-219621:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:218606-218962:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:217767-218123:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:216912-217268:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:215984-216316:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:214784-215137:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:213813-214157:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:213090-213446:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:212158-212514:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:211038-211418:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:209949-210323:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:209162-209503:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:207394-207750:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:206259-206651:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:205770-206126:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:204720-205091:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:203155-203526:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:201558-201682:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:201155-201287:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:200130-200281:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:199782-199878:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:199120-199281:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:198295-198491:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:197848-197928:-1:exon

LOC120764783
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 43150
gene: LOC120764783
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tenascin-X-like isoform X4
translation: MLQYRDAQGQPQALPIDGTSRSVTVPGLAPSHRYRFHLYGLRGKKKINHVSTEAVTAGDEPEEQPLSTEEPQHEKPQTEAPASEAPPTTAVLEELRVSSITPSSVQLQWSVPRGSFDSFMLQYRDAQGQPQALPIDGTSRSVTVPGLSPSRRYRFHLYGLRGKKKINHVSTEAVTAGDEPEEQPLSTEEPQHEKPQTEAPASEAPPTMAVLEELRVSSITPNSVQLQWSVPRGSFDSFMLQYRDAQGQPQALPIDGTSRSVTVPGLSPSRRYRFHLYGLRGKKKINHVSTEAVTAGDEPEEQPLSTEEPQHEKPQTEAPASEAPPTMAVLEELRVSSITPNSVQLQWSVPRGSFDSFMLQYRDAQGQPQALPIDGTSRSVTVPGLSPSHRYRFHLYGLHGAKRIDRVSTDTVTASEEPLPSEEPQEEKPKTEAPASVLAVLEELKVSSVTPNSVQLQWSVPKGSFDSFMLQYRDAQGQPQALPIDGGSRSVTVPGLSPSHRYRFHLYGLRGKKKINHVSTEAVTAGDEPEEQPLSTEEPQHKKPQTEAPASEATPTTAVLEELRVSSVTPSSVQLQWSVPRGSFDSFMLQYRDAQGQPQALPIDGTSRSVTVPGLSPSHRYRFHLYGLRGKKKINHVSTEAVTASEEPLPSEEPQQEKPKTEAPASETLPMRGVLEELKVSSVTPNSVQLQWSVPKGSFDSFMLQYRDDQDQPQALPIDGTSRSVTVPGLSPSHRYRFHLYGLWGKKKINHVSTEAVTAGEEPEEQPLSTEEPQHEKPQTEAPASEAPPTTAVLEELRVSSITPNSVQLQWSVPRGSFDSFMLQYRDAQGQPQALPIDGTSRSVTVPGLSPSHRYRFHLYGLHGGKRTDRVSTDTVTASGEPLHLEEPQQETPKPESPASEALPVRAVLEELKVSSVTPNSVVLQWSVPEGSFDSFMLQYRDAQGQPQALPIDGGSRSVTVPGLSPSHRYRFHLYGLRGKKRTDRVSTDVVTADLEDLPSASMDTPNEVSRTEAPRAEDHKPEHPRTEAPSARAVLGELKVSSITPDSVGLQWSVPEGPFDSFMLQYQDAQGQPQALPLDGGLRLVTVPGLSPSHRYRFHLYGIHRGERTDHVSIDVITAATDEPEQPPLPSEKPQTEALPTEDNQSEHLQSEVPLVQAVLGELKVSSVTPDSVQLQWSIPKGSFDSFMLQYRDVHGQPQALPISGESHSVTVPGLSPSHRYRFHLYGLQGGKRIDRVSTDIVTAAAKQEELPLPSEEPETEAISSDALPARAVLGELKVSSVTPNSVQLQWTVPESPFDSFVLQYRDAQGQPHALPIDGRSRSVTVPGLSPSRQYRFHLYGLQGGKRTDHVSTDVVTDAAVPEQLPLPSEEPQPEDHKPEQPQTEASQGQAALGKLRVSSVTPNSVQLQWSVPEGSFDSFMLQYRDAQGQPQALPIDGTSRSVTVPGLSPSHRYRFHLYGLRGKKRTDRVSTDVVTADPEALPSPSMDTPTESPAAEDHQTAHPQAEAPPSESPSARAVLGELKVSSITPDSVGLQWSVPEGRFDSFTLQYRDAQGQPQALPIDGGSRSVTVPGLSPSHRYRFHLYGLRGGKKIDHVSSDVVTADREAAAVPEELLLPSEEPQAERRQTEAHPSATTPARAVLGELKVSGVTSDSVQLQWSVPKGSFDSFTLQYRDAQGQPQALPIDGGSRSVTVPGLSPSRRYRFHLYGLQGGKRVHHTSNEAVTAAANLDEPPMPPEELQPEDTQPKDPPVKSPSTDAPLAQAVLEDLRVSSVTPSSVQLQWSVPRGSFDSFMLQYRDAQGQPQALPIDGTSRSVMVPGLSPSRRYRFHLYGLQGGKRTDRVSTDIVTATAKTEELPLPSEEPQPEDPKGKDPSTEATPSEAPPARAVLGELKVSSITPNSAQLQWSVPEGPFDSFTLQYRDAQGQPQALPIDGTSRSVTVPGLSPSHRYRFHLYGLRGGKRIDHVSTEAITGAPGTLWVGSVWPRSAWLHWDPLHT…
SIO_010081: LOC120764783
subclass of: SO_0000673
so part of: LOC120764783
location: complement(join(197848..197928,198295..198491,199120..199281,199782..199878,200130..200281,201155..201287,201558..201682,203155..203526,204720..205091,205770..206126,206259..206651,207394..207750,209162..209503,209949..210323,211038..211418,212170..212514,213090..213446,213813..214157,214784..215140,215984..216316,216912..217268,217767..218123,218606..218962,219453..219621))
location: region:197848-219621:-1
so has part: feature:219453-219621:-1:exon
so has part: feature:218606-218962:-1:exon
so has part: feature:217767-218123:-1:exon
so has part: feature:216912-217268:-1:exon
so has part: feature:215984-216316:-1:exon
so has part: feature:214784-215140:-1:exon
so has part: feature:213813-214157:-1:exon
so has part: feature:213090-213446:-1:exon
so has part: feature:212170-212514:-1:exon
so has part: feature:211038-211418:-1:exon
so has part: feature:209949-210323:-1:exon
so has part: feature:209162-209503:-1:exon
so has part: feature:207394-207750:-1:exon
so has part: feature:206259-206651:-1:exon
so has part: feature:205770-206126:-1:exon
so has part: feature:204720-205091:-1:exon
so has part: feature:203155-203526:-1:exon
so has part: feature:201558-201682:-1:exon
so has part: feature:201155-201287:-1:exon
so has part: feature:200130-200281:-1:exon
so has part: feature:199782-199878:-1:exon
so has part: feature:199120-199281:-1:exon
so has part: feature:198295-198491:-1:exon
so has part: feature:197848-197928:-1:exon

XP_058279848.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:219453-219621:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:218606-218962:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:217767-218123:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:216912-217268:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:215984-216316:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:214784-215140:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:213813-214157:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:213090-213446:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:212170-212514:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:211038-211418:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:209949-210323:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:209162-209503:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:207394-207750:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:206259-206651:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:205770-206126:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:204720-205091:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:203155-203526:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:201558-201682:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:201155-201287:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:200130-200281:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:199782-199878:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:199120-199281:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:198295-198491:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:197848-197928:-1:exon

LOC120764783
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 43150
gene: LOC120764783
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tenascin-X-like isoform X2
translation: MLQYRDAQGQPQALPIDGTSRSVTVPGLAPSHRYRFHLYGLRGKKKINHVSTEAVTAGDEPEEQPLSTEEPQHEKPQTEAPASEAPPTTAVLEELRVSSITPSSVQLQWSVPRGSFDSFMLQYRDAQGQPQALPIDGTSRSVTVPGLSPSRRYRFHLYGLRGKKKINHVSTEAVTAGDEPEEQPLSTEEPQHEKPQTEAPASEAPPTMAVLEELRVSSITPNSVQLQWSVPRGSFDSFMLQYRDAQGQPQALPIDGTSRSVTVPGLSPSRRYRFHLYGLRGKKKINHVSTEAVTAGDEPEEQPLSTEEPQHEKPQTEAPASEAPPTMAVLEELRVSSITPNSVQLQWSVPRGSFDSFMLQYRDAQGQPQALPIDGTSRSVTVPGLSPSHRYRFHLYGLHGAKRIDRVSTDTVTASEEPLPSEEPQEEKPKTEAPASVLAVLEELKVSSVTPNSVQLQWSVPKGSFDSFMLQYRDAQGQPQALPIDGGSRSVTVPGLSPSHRYRFHLYGLRGKKKINHVSTEAVTAGDEPEEQPLSTEEPQHKKPQTEAPASEATPTTAVLEELRVSSVTPSSVQLQWSVPRGSFDSFMLQYRDAQGQPQALPIDGTSRSVTVPGLSPSHRYRFHLYGLRGKKKINHVSTEAVTASEEPLPSEEPQQEKPKTEAPASETLPMRGVLEELKVSSVTPNSVQLQWSVPKGSFDSFMLQYRDDQDQPQALPIDGTSRSVTVPGLSPSHRYRFHLYGLWGKKKINHVSTEAVTAGEEPEEQPLSTEEPQHEKPQTEAPASEAPPTTAVLEELRVSSITPNSVQLQWSVPRGSFDSFMLQYRDAQGQPQALPIDGTSRSVTVPGLSPSHRYRFHLYGLHGGKRTDRVSTDTVTASGEPLHLEEPQQETPKPESPASEALPVRAVLEELKVSSVTPNSVVLQWSVPEGSFDSFMLQYRDAQGQPQALPIDGGSRSVTVPGLSPSHRYRFHLYGLRGKKRTDRVSTDVVTGGEEADLEDLPSASMDTPNEVSRTEAPRAEDHKPEHPRTEAPSARAVLGELKVSSITPDSVGLQWSVPEGPFDSFMLQYQDAQGQPQALPLDGGLRLVTVPGLSPSHRYRFHLYGIHRGERTDHVSIDVITATDEPEQPPLPSEKPQTEALPTEDNQSEHLQSEVPLVQAVLGELKVSSVTPDSVQLQWSIPKGSFDSFMLQYRDVHGQPQALPISGESHSVTVPGLSPSHRYRFHLYGLQGGKRIDRVSTDIVTAAAKQEELPLPSEEPETEAISSDALPARAVLGELKVSSVTPNSVQLQWTVPESPFDSFVLQYRDAQGQPHALPIDGRSRSVTVPGLSPSRQYRFHLYGLQGGKRTDHVSTDVVTDAAVPEQLPLPSEEPQPEDHKPEQPQTEASQGQAALGKLRVSSVTPNSVQLQWSVPEGSFDSFMLQYRDAQGQPQALPIDGTSRSVTVPGLSPSHRYRFHLYGLRGKKRTDRVSTDVVTADPEALPSPSMDTPTESPAAEDHQTAHPQAEAPPSESPSARAVLGELKVSSITPDSVGLQWSVPEGRFDSFTLQYRDAQGQPQALPIDGGSRSVTVPGLSPSHRYRFHLYGLRGGKKIDHVSSDVVTADREAAAVPEELLLPSEEPQAERRQTEAHPSATTPARAVLGELKVSGVTSDSVQLQWSVPKGSFDSFTLQYRDAQGQPQALPIDGGSRSVTVPGLSPSRRYRFHLYGLQGGKRVHHTSNEAVTAAANLDEPPMPPEELQPEDTQPKDPPVKSPSTDAPLAQAVLEDLRVSSVTPSSVQLQWSVPRGSFDSFMLQYRDAQGQPQALPIDGTSRSVMVPGLSPSRRYRFHLYGLQGGKRTDRVSTDIVTATAKTEELPLPSEEPQPEDPKGKDPSTEATPSEAPPARAVLGELKVSSITPNSAQLQWSVPEGPFDSFTLQYRDAQGQPQALPIDGTSRSVTVPGLSPSHRYRFHLYGLRGGKRIDHVSTEAITGAPGTLWVGSVWPRSAWLHWDP…
SIO_010081: LOC120764783
subclass of: SO_0000673
so part of: LOC120764783
location: complement(join(197848..197928,198295..198491,199120..199281,199782..199878,200130..200281,201155..201287,201558..201682,203155..203526,204720..205091,205770..206126,206259..206651,207394..207750,209162..209503,209949..210320,211038..211418,212158..212514,213090..213446,213813..214157,214784..215140,215984..216316,216912..217268,217767..218123,218606..218962,219453..219621))
location: region:197848-219621:-1
so has part: feature:219453-219621:-1:exon
so has part: feature:218606-218962:-1:exon
so has part: feature:217767-218123:-1:exon
so has part: feature:216912-217268:-1:exon
so has part: feature:215984-216316:-1:exon
so has part: feature:214784-215140:-1:exon
so has part: feature:213813-214157:-1:exon
so has part: feature:213090-213446:-1:exon
so has part: feature:212158-212514:-1:exon
so has part: feature:211038-211418:-1:exon
so has part: feature:209949-210320:-1:exon
so has part: feature:209162-209503:-1:exon
so has part: feature:207394-207750:-1:exon
so has part: feature:206259-206651:-1:exon
so has part: feature:205770-206126:-1:exon
so has part: feature:204720-205091:-1:exon
so has part: feature:203155-203526:-1:exon
so has part: feature:201558-201682:-1:exon
so has part: feature:201155-201287:-1:exon
so has part: feature:200130-200281:-1:exon
so has part: feature:199782-199878:-1:exon
so has part: feature:199120-199281:-1:exon
so has part: feature:198295-198491:-1:exon
so has part: feature:197848-197928:-1:exon

XP_058279847.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:219453-219621:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:218606-218962:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:217767-218123:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:216912-217268:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:215984-216316:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:214784-215140:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:213813-214157:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:213090-213446:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:212158-212514:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:211038-211418:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:209949-210320:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:209162-209503:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:207394-207750:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:206259-206651:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:205770-206126:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:204720-205091:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:203155-203526:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:201558-201682:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:201155-201287:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:200130-200281:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:199782-199878:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:199120-199281:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:198295-198491:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:197848-197928:-1:exon

LOC120764785
type: Gene
subclass of: SO_0000704
RO_0002162: 43150
gene: LOC120764785
note: antigen peptide transporter 1-like; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(239029..242184)
location: region:239029-242184:-1
so has part: feature:239029-242184:-1:exon
subclass of: SO_0000010

120764785
type: Gene
SIO_000068: ncbigene

position:239029:-1
position: 239029
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:242184:-1
position: 242184
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:239029-242184:-1:exon

LOC120764785
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 43150
gene: LOC120764785
product: antigen peptide transporter 1-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein
transcript id: XM_040088819.2
SIO_010081: LOC120764785
subclass of: SO_0000673
so part of: LOC120764785
location: complement(join(239029..239219,239767..239896,240342..240539,240908..241253,241335..241437,241827..242184))
location: region:239029-242184:-1
so has part: feature:241827-242184:-1:exon
so has part: feature:241335-241437:-1:exon
so has part: feature:240908-241253:-1:exon
so has part: feature:240342-240539:-1:exon
so has part: feature:239767-239896:-1:exon
so has part: feature:239029-239219:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:241827-242184:-1:exon

position:241827:-1
position: 241827
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:241335-241437:-1:exon

position:241335:-1
position: 241335
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:241437:-1
position: 241437
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:240908-241253:-1:exon

position:240908:-1
position: 240908
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:241253:-1
position: 241253
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:240342-240539:-1:exon

position:240342:-1
position: 240342
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:240539:-1
position: 240539
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:239767-239896:-1:exon

position:239767:-1
position: 239767
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:239896:-1
position: 239896
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:239029-239219:-1:exon

position:239219:-1
position: 239219
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC120764785
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 43150
gene: LOC120764785
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: antigen peptide transporter 1-like
translation: MLSPPTRQLLALLGPERGRWMLVGGLMSASALGEVAAPYFTGRVTDRVAQEDAAAAVWPLVLVGLSSAITELACDSMAAVALTRARERLQRGAVAAVLRGDMPGPGNKVGDTPGAVAERVTGDAEATHSALADVLVSGLWALTRAVSLLATMIWLSPALGLLPILAVPLFVVLPHKVGRIEQDLARQVRTAYASTTAVALESLGAIGTVRAFGHEAGVTARVRQSLAHGYRLQQKEALAYAAGLWASGFPALVLELALLLLGGVLGVHRDCHRWGAGHCPHVPAALHPGLGGCALVPPCAGQGHWLL
SIO_010081: LOC120764785
subclass of: SO_0000673
so part of: LOC120764785
location: complement(join(239170..239219,239767..239896,240342..240539,240908..241253,241335..241437,241827..241923))
location: region:239170-241923:-1
so has part: feature:241827-241923:-1:exon
so has part: feature:241335-241437:-1:exon
so has part: feature:240908-241253:-1:exon
so has part: feature:240342-240539:-1:exon
so has part: feature:239767-239896:-1:exon
so has part: feature:239170-239219:-1:exon

XP_039944753.2
type: Protein
SIO_000068: ncbiprotein

position:239170:-1
position: 239170
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:241923:-1
position: 241923
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:241827-241923:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:241335-241437:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:240908-241253:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:240342-240539:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:239767-239896:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:239170-239219:-1:exon

LOC120764784
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 43150
gene: LOC120764784
product: antigen peptide transporter 2-like, transcript variant X2
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_040088817.2
SIO_010081: LOC120764784
subclass of: SO_0000673
so part of: LOC120764784
location: join(242470..242581,242988..243572,244177..244285,244363..244493,244925..245130,245727..245924,246338..246466,246547..246735,246804..246977,247454..247613,248008..248135,248782..249736)
location: region:242470-249736:1
so has part: feature:242470-242581:1:exon
so has part: feature:242988-243572:1:exon
so has part: feature:244177-244285:1:exon
so has part: feature:244363-244493:1:exon
so has part: feature:244925-245130:1:exon
so has part: feature:245727-245924:1:exon
so has part: feature:246338-246466:1:exon
so has part: feature:246547-246735:1:exon
so has part: feature:246804-246977:1:exon
so has part: feature:247454-247613:1:exon
so has part: feature:248008-248135:1:exon
so has part: feature:248782-249736:1:exon

position:242470:1
position: 242470
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:242470-242581:1:exon

position:242581:1
position: 242581
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:242988-243572:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:244177-244285:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:244363-244493:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:244925-245130:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:245727-245924:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:246338-246466:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:246547-246735:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:246804-246977:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:247454-247613:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:248008-248135:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:248782-249736:1:exon

LOC120764784
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 43150
gene: LOC120764784
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: antigen peptide transporter 2-like isoform X2
translation: MALPSAGLLPGLLLVADALTLVLLVPLVPVLASLGVAGVWLEAALRLPVLAVATWLLPRRGPSGATSAAVTVAITPAAFGTLRYLLGPPGAGTGLLVAATPAWLGVTHAAAALALLAWAVPPAPGGITETPGDVTETPGAVPKAPGTLRRALALTWEERKVLGAAFLCLVLAAVGETLAPYATGKVLDAIGSGDGLTAGAIGMVAAAGTTSVLFSGCRGAFFLLLKARLHRILSLRLFSHVVHQDLDFFQGVSAAELLAQFSVEVPRVCETAPKGANQLFRSLGMALVVGAFMVGLAPGLALLALLELPLGIANHRIQSARKQSLQQSMLEASARTASGVQESVAAMETIRIFSAEEEEEEQHSWNLAKELRLRERIDLELAFFTLVHRVIELTIRVLVLFRSHQLLRDGYITPGVLVTFLLYQDTVGSHVQVLLSGFNESVTNAAAGRKIWEYLDRKPTGNVRGTREPPELQGHVTFQKVSFAYPGNPEQPVLKDVTFEVRSGEVTALVGHNGSGKSTTVALLERLRDPGSGKILLDGIPLPEYEHQYLHRKVVLVEQDPVLFSGTIRENVMLGLENCKESELREAAIAAGAMDFIQGLEQGWDTEVGERGGRLAAGERRRVALARALLRRPAVLILDESLDDGDEGAAQRWLRTGLARTVLVVSHRPRVLDVADRLVVLDHGAVVETGTPAELRERCGVYSRLLLGGGRTGGPEAPNMGSEKGAALGRE
SIO_010081: LOC120764784
subclass of: SO_0000673
so part of: LOC120764784
location: join(243050..243572,244177..244285,244363..244493,244925..245130,245727..245924,246338..246466,246547..246735,246804..246977,247454..247613,248008..248135,248782..249030)
location: region:243050-249030:1
so has part: feature:243050-243572:1:exon
so has part: feature:244177-244285:1:exon
so has part: feature:244363-244493:1:exon
so has part: feature:244925-245130:1:exon
so has part: feature:245727-245924:1:exon
so has part: feature:246338-246466:1:exon
so has part: feature:246547-246735:1:exon
so has part: feature:246804-246977:1:exon
so has part: feature:247454-247613:1:exon
so has part: feature:248008-248135:1:exon
so has part: feature:248782-249030:1:exon

XP_039944751.1
type: Protein
SIO_000068: ncbiprotein

position:243050:1
position: 243050
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:243050-243572:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:244177-244285:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:244363-244493:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:244925-245130:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:245727-245924:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:246338-246466:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:246547-246735:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:246804-246977:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:247454-247613:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:248008-248135:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:248782-249030:1:exon

LOC120764784
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 43150
gene: LOC120764784
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: antigen peptide transporter 2-like isoform X2
translation: MALPSAGLLPGLLLVADALTLVLLVPLVPVLASLGVAGVWLEAALRLPVLAVATWLLPRRGPSGATSAAVTVAITPAAFGTLRYLLGPPGAGTGLLVAATPAWLGVTHAAAALALLAWAVPPAPGGITETPGDVTETPGAVPKAPGTLRRALALTWEERKVLGAAFLCLVLAAVGETLAPYATGKVLDAIGSGDGLTAGAIGMVAAAGTTSVLFSGCRGAFFLLLKARLHRILSLRLFSHVVHQDLDFFQGVSAAELLAQFSVEVPRVCETAPKGANQLFRSLGMALVVGAFMVGLAPGLALLALLELPLGIANHRIQSARKQSLQQSMLEASARTASGVQESVAAMETIRIFSAEEEEEEQHSWNLAKELRLRERIDLELAFFTLVHRVIELTIRVLVLFRSHQLLRDGYITPGVLVTFLLYQDTVGSHVQVLLSGFNESVTNAAAGRKIWEYLDRKPTGNVRGTREPPELQGHVTFQKVSFAYPGNPEQPVLKDVTFEVRSGEVTALVGHNGSGKSTTVALLERLRDPGSGKILLDGIPLPEYEHQYLHRKVVLVEQDPVLFSGTIRENVMLGLENCKESELREAAIAAGAMDFIQGLEQGWDTEVGERGGRLAAGERRRVALARALLRRPAVLILDESLDDGDEGAAQRWLRTGLARTVLVVSHRPRVLDVADRLVVLDHGAVVETGTPAELRERCGVYSRLLLGGGRTGGPEAPNMGSEKGAALGRE
SIO_010081: LOC120764784
subclass of: SO_0000673
so part of: LOC120764784
location: join(243050..243572,244177..244285,244363..244493,244925..245130,245727..245924,246338..246466,246547..246735,246804..246977,247454..247613,248008..248135,248782..249030)
location: region:243050-249030:1
so has part: feature:243050-243572:1:exon
so has part: feature:244177-244285:1:exon
so has part: feature:244363-244493:1:exon
so has part: feature:244925-245130:1:exon
so has part: feature:245727-245924:1:exon
so has part: feature:246338-246466:1:exon
so has part: feature:246547-246735:1:exon
so has part: feature:246804-246977:1:exon
so has part: feature:247454-247613:1:exon
so has part: feature:248008-248135:1:exon
so has part: feature:248782-249030:1:exon

XP_039944752.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:243050-243572:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:244177-244285:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:244363-244493:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:244925-245130:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:245727-245924:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:246338-246466:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:246547-246735:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:246804-246977:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:247454-247613:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:248008-248135:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:248782-249030:1:exon

LOC120764786
type: Gene
subclass of: SO_0000704
RO_0002162: 43150
gene: LOC120764786
note: uncharacterized LOC120764786; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(250865..274950)
location: region:250865-274950:-1
so has part: feature:250865-274950:-1:exon
subclass of: SO_0000011

120764786
type: Gene
SIO_000068: ncbigene

position:250865:-1
position: 250865
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:274950:-1
position: 274950
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:250865-274950:-1:exon

LOC120764786
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 43150
nc RNA class: lncRNA
gene: LOC120764786
product: uncharacterized LOC120764786, transcript variant X2
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XR_009208579.1
SIO_010081: LOC120764786
subclass of: SO_0000673
so part of: LOC120764786
location: complement(join(250865..253049,274554..274676,274875..274950))
location: region:250865-274950:-1
so has part: feature:274875-274950:-1:exon
so has part: feature:274554-274676:-1:exon
so has part: feature:250865-253049:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:274875-274950:-1:exon

position:274875:-1
position: 274875
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:274554-274676:-1:exon

position:274554:-1
position: 274554
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:274676:-1
position: 274676
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:250865-253049:-1:exon

position:253049:-1
position: 253049
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC120764786
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 43150
nc RNA class: lncRNA
gene: LOC120764786
product: uncharacterized LOC120764786, transcript variant X1
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XR_005704276.2
SIO_010081: LOC120764786
subclass of: SO_0000673
so part of: LOC120764786
location: complement(join(250865..253049,274554..274676,274851..274945))
location: region:250865-274945:-1
so has part: feature:274851-274945:-1:exon
so has part: feature:274554-274676:-1:exon
so has part: feature:250865-253049:-1:exon

position:274945:-1
position: 274945
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:274851-274945:-1:exon

position:274851:-1
position: 274851
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:274554-274676:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:250865-253049:-1:exon