Hirundo rustica isolate bHirRus1 chromosome 30, bHirRus1.pri.v3, whole genome shotgun sequence.
type: Entry
definition: Hirundo rustica isolate bHirRus1 chromosome 30, bHirRus1.pri.v3, whole genome shotgun sequence.
sequence version: NC_053479.1
sequence date: 2023-07-25
sequence: sequence
division: CON
label: NC_053479.1
type: RefSeq
SIO_000068: refseq
dblink: PRJNA713843
dblink: SAMN14675488
keyword: WGS
keyword: RefSeq
source: Hirundo rustica (Barn swallow)
organism: Hirundo rustica
taxonomy: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Passeriformes; Sylvioidea; Hirundinidae; Hirundo.
comment: REFSEQ INFORMATION: The reference sequence is identical to\nCM026876.1.\nAssembly name: bHirRus1.pri.v3\nThe genomic sequence for this RefSeq record is from the\nwhole-genome assembly released by the Vertebrate Genomes Project on\n2021/11/30. The original whole-genome shotgun project has the\naccession JADDRP000000000.3.\n\n##Genome-Assembly-Data-START##\nAssembly Provider :: Vertebrate Genomes Project\nAssembly Date :: 20-AUG-2021\nAssembly Method :: FALCON v. DX 2.0.1; FALCON-Unzip v. DX\n 1.2.1; purge_dups v. DX 19-08-10;\n scaff10X v. DX 2.0.3; bionano Solve v. DX\n 3.4.0; Salsa2 HiC v. DX 2.2.0; Arrow\n polishing and gap filling v. DX 7.0.1.1;\n Longranger Align v. DX 2.2.2.1; freebayes\n v. DX 19-07-11; gEVAL manual curation v.\n 2020-02-11; VGP assembly pipeline v. 1.6;\n Manual Curation BUSCO v. 2021-01-11;\n Manual Curation v. 2021-08-20\nAssembly Name :: bHirRus1.pri.v3\nDiploid :: Principal Pseudohaplotype\nGenome Representation :: Full\nExpected Final Version :: No\nGenome Coverage :: 51.15x\nSequencing Technology :: PacBio Sequel I CLR; Illumina NovaSeq;\n Arima Genomics Hi-C; Bionano Genomics DLS\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI RefSeq\nAnnotation Status :: Full annotation\nAnnotation Name :: GCF_015227805.2-RS_2023_07\nAnnotation Pipeline :: NCBI eukaryotic genome annotation\n pipeline\nAnnotation Software Version :: 10.1\nAnnotation Method :: Gnomon; cmsearch; tRNAscan-SE\nFeatures Annotated :: Gene; mRNA; CDS; ncRNA\nAnnotation Date :: 07/19/2023\n##Genome-Annotation-Data-END##

sequence
subclass of: SO_0000340
sequence length: 1648998
topology: linear
so has quality: SO_0000987
location: 1..1648998
location: region:1-1648998:1
RO_0002162: 43150

NC_053479
type: RefSeq
SIO_000068: refseq

PRJNA713843
type: BioProject
SIO_000068: bioproject

SAMN14675488
type: BioSample
SIO_000068: biosample

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1648998:1
position: 1648998
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-1648998:1:source
so part of: sequence
organism: Hirundo rustica
mol type: genomic DNA
isolate: bHirRus1
chromosome: 30
sex: female
tissue type: muscle
dev stage: adult
country: Italy
collection date: 22-May-2018
collected by: Giulio Formenti, Nicola Saino

43150
type: Taxonomy
SIO_000068: taxonomy

C1QL4
type: Gene
subclass of: SO_0000704
RO_0002162: 43150
gene: C1QL4
note: complement C1q like 4; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 12750..16790
location: region:12750-16790:1
so has part: feature:12750-16790:1:exon
subclass of: SO_0000010

120764498
type: Gene
SIO_000068: ncbigene

position:12750:1
position: 12750
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:16790:1
position: 16790
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:12750-16790:1:exon

C1QL4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 43150
gene: C1QL4
product: complement C1q like 4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 17 Proteins
transcript id: XM_040088485.2
SIO_010081: C1QL4
subclass of: SO_0000673
so part of: C1QL4
location: join(12750..12781,13294..14733,16510..16790)
location: region:12750-16790:1
so has part: feature:12750-12781:1:exon
so has part: feature:13294-14733:1:exon
so has part: feature:16510-16790:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:12750-12781:1:exon

position:12781:1
position: 12781
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:13294-14733:1:exon

position:13294:1
position: 13294
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:14733:1
position: 14733
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:16510-16790:1:exon

position:16510:1
position: 16510
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

C1QL4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 43150
gene: C1QL4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: complement C1q-like protein 4
translation: MLLVLLVAIPLLVHGSKAAAHYEMLGSCRMVCDPYPELPPPSPPPFLPGAKGEPGRKGRTGLRGPPGPPGPRGPPGEPGRPGPPGPPGPGPGGYIPSFYSPKIAFYAGLRKPHEGYEVLRFDDVVTNVGNYYEPSSGKFTCPLPGIYFFTYHVLMRGGDGTSMWADLMKNGQVRASAIAQDADQNYDYASNSVILHLDVGDEVFVKLDGGKVHGGNTNKYSTFSGFIIYPD
SIO_010081: C1QL4
subclass of: SO_0000673
so part of: C1QL4
location: join(14218..14733,16510..16689)
location: region:14218-16689:1
so has part: feature:14218-14733:1:exon
so has part: feature:16510-16689:1:exon

XP_039944419.1
type: Protein
SIO_000068: ncbiprotein

position:14218:1
position: 14218
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:16689:1
position: 16689
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:14218-14733:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:16510-16689:1:exon

PFDN5
type: Gene
subclass of: SO_0000704
RO_0002162: 43150
gene: PFDN5
note: prefoldin subunit 5; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(17945..20240)
location: region:17945-20240:-1
so has part: feature:17945-20240:-1:exon
subclass of: SO_0000010

120764435
type: Gene
SIO_000068: ncbigene

position:17945:-1
position: 17945
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:20240:-1
position: 20240
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:17945-20240:-1:exon

PFDN5
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 43150
gene: PFDN5
product: prefoldin subunit 5
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_040088406.1
SIO_010081: PFDN5
subclass of: SO_0000673
so part of: PFDN5
location: complement(join(17945..18154,18623..18728,18984..19058,19160..19191,19623..19725,20139..20240))
location: region:17945-20240:-1
so has part: feature:20139-20240:-1:exon
so has part: feature:19623-19725:-1:exon
so has part: feature:19160-19191:-1:exon
so has part: feature:18984-19058:-1:exon
so has part: feature:18623-18728:-1:exon
so has part: feature:17945-18154:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:20139-20240:-1:exon

position:20139:-1
position: 20139
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:19623-19725:-1:exon

position:19623:-1
position: 19623
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:19725:-1
position: 19725
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:19160-19191:-1:exon

position:19160:-1
position: 19160
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:19191:-1
position: 19191
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:18984-19058:-1:exon

position:18984:-1
position: 18984
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:19058:-1
position: 19058
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:18623-18728:-1:exon

position:18623:-1
position: 18623
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:18728:-1
position: 18728
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:17945-18154:-1:exon

position:18154:-1
position: 18154
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

PFDN5
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 43150
gene: PFDN5
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: prefoldin subunit 5
translation: MAQAVSVGELGLPQLELLKGQLEQEVEFLSSSLAQLKVVQTKFVEAKECLNVLHKGNEGKDLLVPLTSSMYVPGKLQDVRTVLVDVGTGYYVEKSADDARAFFKRKIEFLTRQMEKIQPALQEKHAMKQAVLEMMTQKLQQLTASQGVPGAAKA
SIO_010081: PFDN5
subclass of: SO_0000673
so part of: PFDN5
location: complement(join(18078..18154,18623..18728,18984..19058,19160..19191,19623..19725,20139..20210))
location: region:18078-20210:-1
so has part: feature:20139-20210:-1:exon
so has part: feature:19623-19725:-1:exon
so has part: feature:19160-19191:-1:exon
so has part: feature:18984-19058:-1:exon
so has part: feature:18623-18728:-1:exon
so has part: feature:18078-18154:-1:exon

XP_039944340.1
type: Protein
SIO_000068: ncbiprotein

position:18078:-1
position: 18078
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:20210:-1
position: 20210
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:20139-20210:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:19623-19725:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:19160-19191:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:18984-19058:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:18623-18728:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:18078-18154:-1:exon

ESPL1
type: Gene
subclass of: SO_0000704
RO_0002162: 43150
gene: ESPL1
note: extra spindle pole bodies like 1, separase; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(20450..34311)
location: region:20450-34311:-1
so has part: feature:20450-34311:-1:exon
subclass of: SO_0000010

120764372
type: Gene
SIO_000068: ncbigene

position:20450:-1
position: 20450
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:34311:-1
position: 34311
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:20450-34311:-1:exon

ESPL1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 43150
gene: ESPL1
product: extra spindle pole bodies like 1, separase
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_040088325.2
SIO_010081: ESPL1
subclass of: SO_0000673
so part of: ESPL1
location: complement(join(20450..21136,21404..21568,21710..21793,21912..22024,22097..22201,22409..22570,22668..22829,22987..23109,23328..23455,23634..23830,24105..24318,24533..24616,24705..24954,25374..26431,26694..26803,27133..27289,27820..27951,28092..28263,28495..28614,28825..28959,29158..29297,29615..29726,29876..30035,30271..30579,30852..30988,31068..31217,31381..31517,31685..31805,31990..32094,32339..33391,33609..33837,34256..34311))
location: region:20450-34311:-1
so has part: feature:34256-34311:-1:exon
so has part: feature:33609-33837:-1:exon
so has part: feature:32339-33391:-1:exon
so has part: feature:31990-32094:-1:exon
so has part: feature:31685-31805:-1:exon
so has part: feature:31381-31517:-1:exon
so has part: feature:31068-31217:-1:exon
so has part: feature:30852-30988:-1:exon
so has part: feature:30271-30579:-1:exon
so has part: feature:29876-30035:-1:exon
so has part: feature:29615-29726:-1:exon
so has part: feature:29158-29297:-1:exon
so has part: feature:28825-28959:-1:exon
so has part: feature:28495-28614:-1:exon
so has part: feature:28092-28263:-1:exon
so has part: feature:27820-27951:-1:exon
so has part: feature:27133-27289:-1:exon
so has part: feature:26694-26803:-1:exon
so has part: feature:25374-26431:-1:exon
so has part: feature:24705-24954:-1:exon
so has part: feature:24533-24616:-1:exon
so has part: feature:24105-24318:-1:exon
so has part: feature:23634-23830:-1:exon
so has part: feature:23328-23455:-1:exon
so has part: feature:22987-23109:-1:exon
so has part: feature:22668-22829:-1:exon
so has part: feature:22409-22570:-1:exon
so has part: feature:22097-22201:-1:exon
so has part: feature:21912-22024:-1:exon
so has part: feature:21710-21793:-1:exon
so has part: feature:21404-21568:-1:exon
so has part: feature:20450-21136:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:34256-34311:-1:exon

position:34256:-1
position: 34256
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:33609-33837:-1:exon

position:33609:-1
position: 33609
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:33837:-1
position: 33837
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:32339-33391:-1:exon

position:32339:-1
position: 32339
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:33391:-1
position: 33391
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:31990-32094:-1:exon

position:31990:-1
position: 31990
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:32094:-1
position: 32094
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:31685-31805:-1:exon

position:31685:-1
position: 31685
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:31805:-1
position: 31805
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:31381-31517:-1:exon

position:31381:-1
position: 31381
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:31517:-1
position: 31517
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:31068-31217:-1:exon

position:31068:-1
position: 31068
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:31217:-1
position: 31217
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:30852-30988:-1:exon

position:30852:-1
position: 30852
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:30988:-1
position: 30988
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:30271-30579:-1:exon

position:30271:-1
position: 30271
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:30579:-1
position: 30579
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:29876-30035:-1:exon

position:29876:-1
position: 29876
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:30035:-1
position: 30035
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:29615-29726:-1:exon

position:29615:-1
position: 29615
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:29726:-1
position: 29726
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:29158-29297:-1:exon

position:29158:-1
position: 29158
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:29297:-1
position: 29297
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:28825-28959:-1:exon

position:28825:-1
position: 28825
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:28959:-1
position: 28959
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:28495-28614:-1:exon

position:28495:-1
position: 28495
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:28614:-1
position: 28614
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:28092-28263:-1:exon

position:28092:-1
position: 28092
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:28263:-1
position: 28263
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:27820-27951:-1:exon

position:27820:-1
position: 27820
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:27951:-1
position: 27951
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:27133-27289:-1:exon

position:27133:-1
position: 27133
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:27289:-1
position: 27289
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:26694-26803:-1:exon

position:26694:-1
position: 26694
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:26803:-1
position: 26803
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:25374-26431:-1:exon

position:25374:-1
position: 25374
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:26431:-1
position: 26431
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:24705-24954:-1:exon

position:24705:-1
position: 24705
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:24954:-1
position: 24954
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:24533-24616:-1:exon

position:24533:-1
position: 24533
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:24616:-1
position: 24616
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:24105-24318:-1:exon

position:24105:-1
position: 24105
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:24318:-1
position: 24318
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:23634-23830:-1:exon

position:23634:-1
position: 23634
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:23830:-1
position: 23830
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:23328-23455:-1:exon

position:23328:-1
position: 23328
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:23455:-1
position: 23455
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:22987-23109:-1:exon

position:22987:-1
position: 22987
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:23109:-1
position: 23109
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 26
SIO_000628: feature:22668-22829:-1:exon

position:22668:-1
position: 22668
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:22829:-1
position: 22829
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 27
SIO_000628: feature:22409-22570:-1:exon

position:22409:-1
position: 22409
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:22570:-1
position: 22570
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 28
SIO_000628: feature:22097-22201:-1:exon

position:22097:-1
position: 22097
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:22201:-1
position: 22201
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 29
SIO_000628: feature:21912-22024:-1:exon

position:21912:-1
position: 21912
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:22024:-1
position: 22024
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 30
SIO_000628: feature:21710-21793:-1:exon

position:21710:-1
position: 21710
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:21793:-1
position: 21793
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 31
SIO_000628: feature:21404-21568:-1:exon

position:21404:-1
position: 21404
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:21568:-1
position: 21568
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 32
SIO_000628: feature:20450-21136:-1:exon

position:21136:-1
position: 21136
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

ESPL1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 43150
gene: ESPL1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: separin
translation: MAEKDGKGGKDRKGGENRKGGRGEKGGKDKKGGKGRKDEKDREDGKDGSTDGWAGFEERVEKMQKSLQCLSAPRSHRVQTCDRVLRACVEELARPGGLPAHGARLLLLVQETVQHYLSLVPEPPHLYLEKMLFHVLRNATGWLDTCAMAELLRERLRRCRPDDERAKVIHSTFSVLWTVPDSQTRPEGPRTEDRRLLASRIRAVRFLLLLESQDCVPQESFQPPFFTSQSARTAAAAASLFQAESAPCWAFLAGQFQESLLNTLRTELLQPLSLSQSLCFLELTRECCRHLCKAQEHREALATLEDSKGFLGADDSLGALLELLEAGAQLSWALSKGRDGQGAVGPALCQAGAALAVPFYGRALWVLVENSRFVLAQLGEVLRRSQELPLGLQELPGICAFSQGHGRALQQLLAQVPSDSIQDQVRVKQLLFHSLQLFSNAIHEIFQRSQPSRWLEMGQVTSSCAQIVTWMLDGLDGLPEAEKGKFLNVTAAAAFCLGQAFQSQNIPQAAGAVCKPFCQTVLATNGYSWPGATPEKLHRCFQLHVESWRRQGQLQRALGAVVQWLQAVVPRYQRSQGSGTQPQHSQVLVPHSQCAQPSPVRPTSLVLEPMALWVRLKMETVKQGKEEELQLRSLQDILASQSLSENTMLLLLLAELQAYKSLRCPTGPERYKILQKMLGMWDPERVWRPWGAGEPSGIRDPSGTPDPNCSLPRAVALLELGQVLCSHSSNTDTDCSALDAIQESLKLLDSLSRNSQIWNSLMRDQLLDEHAQALLWLHICTLEDLLEKSLARERRGRLQSSKPLDPEGAWLEARDGIRCSLSSDGALSKPLDEAFSLWKQLLEHPRIPEVRSLEQTICSLQILAALYRLQEKPIQALESFLLLRSLCQRLGDNFGMANSLCQISRVLLELECPLQTEIFLEELEVCLETDKGSEDSWLLLRHSQLLLRSHLYCLQKKVDQAVPLLLKVLQEPQAQRATRSWLLARAQGLQVVATILELPPAQLGAPLRERIQQHGWSSPRTALLEAQKLFRSVLVSLMGSDILGVTQSIPAEEPSPDCRLALVHKWQVLGDILGCCQRLVTLLGHSEVQCRARAFCSEGLTVAGHLQAARWCTLFLVLQSQLELQQGELQLSQSYLQDAQFLLQPQTGPEAHREPEHQVKVQLQRGGLEQRRQAAVAEQGSEEDEGFLQGPSLHLLPPAALPEQPDALTASPELKRGRRETLEFLCHGASCACSFCSDPALVALGLRWLLAQARALLAAGEVTPGLAQVRRVLELCDSASARLLCQLRGRVGGGHGDPRGGGFLGPLAQLVAAGYSTLAQQSLPGPSRSLPVWDEELERGLILLGTRHPPVAGLGVAVATLLMAKAVATLGRVAAALGRSMDNVLAQAWTPQLLPTPQKTPNLPKSGSRKTKAKKTLQGKPSKSRDVVTLKDSDTEVPPIVLRPGGPCTPHPKSGAPRRKLLGGSRTPFTIFCDESSPPGGKSQLCRAPKAPGRTKSRIRVVFSDSDSEEPQIPLDPPKTTRKYSSAQRVQPPKSPESSLEIGVRPRRGRPRKELGSSKKREKRENLEKNKEEMSFKPPLLTPGRDNEEIPELGRSGDPPNPEGSSLSAQPGVPSLDTVRSLLAEALAWVGHFPPGSLYGQLCQLLALTTGDRDPLATAGLLAESLSVTTRHQMLSIIHARTRKKRKAAAAARGDISDQLQGLSLQEGDSQDSQSHLAELQELFQFSSAGLVPAEQERFREQLQKIPRGVTVCQLSLASAAPGALGDTLLLTRLQRGAEPLSVRIATQRSQAPLSRILQEFELIQREQREANVCTERQEWWERRSRLDLRMQSLIQSLDQEVLGCWRGLLLPRDPRHSPLDQQELSRLLQELRACGWDSPNPALLQALLAGLRLADVRALALALCPARPCRAQLLLDEALERCREGPEGSAGSLVLLLDKHLQRLPWESSGTLRNIPVTRLPALRFVLCYSLQRQRSSSVLKRGVNPQNTFYVLNPQRDL…
SIO_010081: ESPL1
subclass of: SO_0000673
so part of: ESPL1
location: complement(join(20935..21136,21404..21568,21710..21793,21912..22024,22097..22201,22409..22570,22668..22829,22987..23109,23328..23455,23634..23830,24105..24318,24533..24616,24705..24954,25374..26431,26694..26803,27133..27289,27820..27951,28092..28263,28495..28614,28825..28959,29158..29297,29615..29726,29876..30035,30271..30579,30852..30988,31068..31217,31381..31517,31685..31805,31990..32094,32339..33391,33609..33800))
location: region:20935-33800:-1
so has part: feature:33609-33800:-1:exon
so has part: feature:32339-33391:-1:exon
so has part: feature:31990-32094:-1:exon
so has part: feature:31685-31805:-1:exon
so has part: feature:31381-31517:-1:exon
so has part: feature:31068-31217:-1:exon
so has part: feature:30852-30988:-1:exon
so has part: feature:30271-30579:-1:exon
so has part: feature:29876-30035:-1:exon
so has part: feature:29615-29726:-1:exon
so has part: feature:29158-29297:-1:exon
so has part: feature:28825-28959:-1:exon
so has part: feature:28495-28614:-1:exon
so has part: feature:28092-28263:-1:exon
so has part: feature:27820-27951:-1:exon
so has part: feature:27133-27289:-1:exon
so has part: feature:26694-26803:-1:exon
so has part: feature:25374-26431:-1:exon
so has part: feature:24705-24954:-1:exon
so has part: feature:24533-24616:-1:exon
so has part: feature:24105-24318:-1:exon
so has part: feature:23634-23830:-1:exon
so has part: feature:23328-23455:-1:exon
so has part: feature:22987-23109:-1:exon
so has part: feature:22668-22829:-1:exon
so has part: feature:22409-22570:-1:exon
so has part: feature:22097-22201:-1:exon
so has part: feature:21912-22024:-1:exon
so has part: feature:21710-21793:-1:exon
so has part: feature:21404-21568:-1:exon
so has part: feature:20935-21136:-1:exon

XP_039944259.1
type: Protein
SIO_000068: ncbiprotein

position:20935:-1
position: 20935
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:33800:-1
position: 33800
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:33609-33800:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:32339-33391:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:31990-32094:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:31685-31805:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:31381-31517:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:31068-31217:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:30852-30988:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:30271-30579:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:29876-30035:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:29615-29726:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:29158-29297:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:28825-28959:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:28495-28614:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:28092-28263:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:27820-27951:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:27133-27289:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:26694-26803:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:25374-26431:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:24705-24954:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:24533-24616:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:24105-24318:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:23634-23830:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:23328-23455:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:22987-23109:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:22668-22829:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:22409-22570:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:22097-22201:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:21912-22024:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:21710-21793:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:21404-21568:-1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:20935-21136:-1:exon

FIGNL2
type: Gene
subclass of: SO_0000704
RO_0002162: 43150
gene: FIGNL2
note: fidgetin like 2; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 49902..64538
location: region:49902-64538:1
so has part: feature:49902-64538:1:exon
subclass of: SO_0000010

120764439
type: Gene
SIO_000068: ncbigene

position:49902:1
position: 49902
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:64538:1
position: 64538
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:49902-64538:1:exon

FIGNL2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 43150
gene: FIGNL2
product: fidgetin like 2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 Proteins
transcript id: XM_040088411.2
SIO_010081: FIGNL2
subclass of: SO_0000673
so part of: FIGNL2
location: join(49902..49979,60663..64538)
location: region:49902-64538:1
so has part: feature:49902-49979:1:exon
so has part: feature:60663-64538:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:49902-49979:1:exon

position:49979:1
position: 49979
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:60663-64538:1:exon

position:60663:1
position: 60663
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

FIGNL2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 43150
gene: FIGNL2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: fidgetin-like protein 2
translation: MHWSPEHAQSLNQWPEQHLDVSSTTSSPAHKSDLYPSTRQRFNYAWANDDISALTASNLLKRYAEKYSGVLDAPYERPTLGGYGDGAFGPVNGQKGDGEPWPGAHGSDGAYPLTPIHDGLAGAKAVVPPAVPGGSGAIALGGSPVLPANLGDAAYPGNSCGAAAAASGGLGGSQEYPSGYGGTYLPSGYCTQPAAALPPPHPPALHSSGLLQPPHPSPALVPGYGSSGPVYNYAAGSYPPQPGYGGIHPPHPSASYLPSGIAAPTPIPAPPPAARPPGVPGYGYQGAGLGPLAVPPLGTEAAGTLKRKAFDVGGDEDGEGRYRKYGYEQPKSPYPLSDGGECRGNGFGGGAESPQVPFKPGKRPASDEEHGGKYGGQQMKGLASPPYGARDAALRPAEPFEKFSPPLANGERAAEPGPPFPLRLPSKAPAFGGAPPEEQHKNVDPLVLELVNAKVVERGPPVQWSDIAGQVSVKAAIEEELLRPLLRPGSVPSRPLRTLLLFGPRGTGKTLLSRCISTQLGSTLLRLSGTTLLSAWKAEAEKILQTVFFVASCRQPAVVLITEAESLLDGGQAGNLKSQLLSYLDNVAASSERNVVVIGTTARPGSIDEASQRRFGARLYIPPPDGEARRHILRRALAQHSCCLSERELAALAQRTESFSGAELLRLCQHAGAARRALPGPHTCYQDLEKAFCKVRPAASQKELDLFLEWDKMYGTRH
SIO_010081: FIGNL2
subclass of: SO_0000673
so part of: FIGNL2
location: 60674..62830
location: region:60674-62830:1
so has part: feature:60674-62830:1:exon

XP_039944345.1
type: Protein
SIO_000068: ncbiprotein

position:60674:1
position: 60674
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:62830:1
position: 62830
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:60674-62830:1:exon

TMDD1
type: Gene
subclass of: SO_0000704
RO_0002162: 43150
gene: TMDD1
note: transmembrane and death domain 1; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 65480..66127
location: region:65480-66127:1
so has part: feature:65480-66127:1:exon
subclass of: SO_0000010

120764373
type: Gene
SIO_000068: ncbigene

position:65480:1
position: 65480
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:66127:1
position: 66127
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:65480-66127:1:exon

TMDD1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 43150
gene: TMDD1
product: transmembrane and death domain 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein
transcript id: XM_040088326.1
SIO_010081: TMDD1
subclass of: SO_0000673
so part of: TMDD1
location: 65480..66127
location: region:65480-66127:1
so has part: feature:65480-66127:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:65480-66127:1:exon

TMDD1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 43150
gene: TMDD1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transmembrane and death domain protein 1
translation: MPVPLGLALLLLLALRGRCDDSVAAAVGPHSMGRIAQLLAGPECHQLRAELESPEEELELPEPLPEEKSPVRRRRRRSRSARGCSETLRLWLATAGETTTWDRLVRALRQIGRSDIARELGKNLNQDRSLQLRRNVQGYSRSVQHLSAAQLQPRGRRAPPGAELLLQRHPPPRYRRGLLAWVRPVLLGGLGAFLTAVLLTGTLMYFCHWRRLLGA
SIO_010081: TMDD1
subclass of: SO_0000673
so part of: TMDD1
location: 65480..66127
location: region:65480-66127:1
so has part: feature:65480-66127:1:exon

XP_039944260.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:65480-66127:1:exon

SCN8A
type: Gene
subclass of: SO_0000704
RO_0002162: 43150
gene: SCN8A
note: sodium voltage-gated channel alpha subunit 8; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(67449..122554)
location: region:67449-122554:-1
so has part: feature:67449-122554:-1:exon
subclass of: SO_0000010

120764510
type: Gene
SIO_000068: ncbigene

position:67449:-1
position: 67449
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:122554:-1
position: 122554
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:67449-122554:-1:exon

SCN8A
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 43150
gene: SCN8A
product: sodium voltage-gated channel alpha subunit 8, transcript variant X1
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_058423819.1
SIO_010081: SCN8A
subclass of: SO_0000673
so part of: SCN8A
location: complement(join(67449..73496,74649..74919,76207..76311,76892..77029,77738..77791,78195..78479,81990..82112,85758..85931,86409..86563,87381..87498,88523..88993,90089..90445,91106..91279,91441..91679,93436..93571,94092..94451,95033..95320,95585..95791,96444..96585,97086..97149,97505..97726,101457..101548,104191..104319,104547..104635,106127..106246,113831..114160,122452..122554))
location: region:67449-122554:-1
so has part: feature:122452-122554:-1:exon
so has part: feature:113831-114160:-1:exon
so has part: feature:106127-106246:-1:exon
so has part: feature:104547-104635:-1:exon
so has part: feature:104191-104319:-1:exon
so has part: feature:101457-101548:-1:exon
so has part: feature:97505-97726:-1:exon
so has part: feature:97086-97149:-1:exon
so has part: feature:96444-96585:-1:exon
so has part: feature:95585-95791:-1:exon
so has part: feature:95033-95320:-1:exon
so has part: feature:94092-94451:-1:exon
so has part: feature:93436-93571:-1:exon
so has part: feature:91441-91679:-1:exon
so has part: feature:91106-91279:-1:exon
so has part: feature:90089-90445:-1:exon
so has part: feature:88523-88993:-1:exon
so has part: feature:87381-87498:-1:exon
so has part: feature:86409-86563:-1:exon
so has part: feature:85758-85931:-1:exon
so has part: feature:81990-82112:-1:exon
so has part: feature:78195-78479:-1:exon
so has part: feature:77738-77791:-1:exon
so has part: feature:76892-77029:-1:exon
so has part: feature:76207-76311:-1:exon
so has part: feature:74649-74919:-1:exon
so has part: feature:67449-73496:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:122452-122554:-1:exon

position:122452:-1
position: 122452
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:113831-114160:-1:exon

position:113831:-1
position: 113831
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:114160:-1
position: 114160
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:106127-106246:-1:exon

position:106127:-1
position: 106127
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:106246:-1
position: 106246
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:104547-104635:-1:exon

position:104547:-1
position: 104547
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:104635:-1
position: 104635
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:104191-104319:-1:exon

position:104191:-1
position: 104191
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:104319:-1
position: 104319
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:101457-101548:-1:exon

position:101457:-1
position: 101457
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:101548:-1
position: 101548
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:97505-97726:-1:exon

position:97505:-1
position: 97505
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:97726:-1
position: 97726
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:97086-97149:-1:exon

position:97086:-1
position: 97086
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:97149:-1
position: 97149
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:96444-96585:-1:exon

position:96444:-1
position: 96444
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:96585:-1
position: 96585
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:95585-95791:-1:exon

position:95585:-1
position: 95585
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:95791:-1
position: 95791
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:95033-95320:-1:exon

position:95033:-1
position: 95033
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:95320:-1
position: 95320
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:94092-94451:-1:exon

position:94092:-1
position: 94092
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:94451:-1
position: 94451
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:93436-93571:-1:exon

position:93436:-1
position: 93436
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:93571:-1
position: 93571
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:91441-91679:-1:exon

position:91441:-1
position: 91441
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:91679:-1
position: 91679
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:91106-91279:-1:exon

position:91106:-1
position: 91106
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:91279:-1
position: 91279
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:90089-90445:-1:exon

position:90089:-1
position: 90089
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:90445:-1
position: 90445
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:88523-88993:-1:exon

position:88523:-1
position: 88523
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:88993:-1
position: 88993
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:87381-87498:-1:exon

position:87381:-1
position: 87381
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:87498:-1
position: 87498
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:86409-86563:-1:exon

position:86409:-1
position: 86409
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:86563:-1
position: 86563
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:85758-85931:-1:exon

position:85758:-1
position: 85758
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:85931:-1
position: 85931
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:81990-82112:-1:exon

position:81990:-1
position: 81990
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:82112:-1
position: 82112
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:78195-78479:-1:exon

position:78195:-1
position: 78195
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:78479:-1
position: 78479
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:77738-77791:-1:exon

position:77738:-1
position: 77738
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:77791:-1
position: 77791
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:76892-77029:-1:exon

position:76892:-1
position: 76892
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:77029:-1
position: 77029
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:76207-76311:-1:exon

position:76207:-1
position: 76207
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:76311:-1
position: 76311
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 26
SIO_000628: feature:74649-74919:-1:exon

position:74649:-1
position: 74649
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:74919:-1
position: 74919
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 27
SIO_000628: feature:67449-73496:-1:exon

position:73496:-1
position: 73496
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

SCN8A
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 43150
gene: SCN8A
product: sodium voltage-gated channel alpha subunit 8, transcript variant X2
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_058423820.1
SIO_010081: SCN8A
subclass of: SO_0000673
so part of: SCN8A
location: complement(join(67449..73496,74649..74919,76207..76311,76892..77029,77738..77791,78195..78479,81990..82112,85758..85931,86409..86563,87381..87498,88523..88993,90089..90445,91106..91279,91441..91679,93436..93571,94092..94451,95033..95320,95585..95791,96444..96585,97086..97149,97505..97726,101686..101777,104191..104319,104547..104635,106127..106246,113831..114160,122452..122554))
location: region:67449-122554:-1
so has part: feature:122452-122554:-1:exon
so has part: feature:113831-114160:-1:exon
so has part: feature:106127-106246:-1:exon
so has part: feature:104547-104635:-1:exon
so has part: feature:104191-104319:-1:exon
so has part: feature:101686-101777:-1:exon
so has part: feature:97505-97726:-1:exon
so has part: feature:97086-97149:-1:exon
so has part: feature:96444-96585:-1:exon
so has part: feature:95585-95791:-1:exon
so has part: feature:95033-95320:-1:exon
so has part: feature:94092-94451:-1:exon
so has part: feature:93436-93571:-1:exon
so has part: feature:91441-91679:-1:exon
so has part: feature:91106-91279:-1:exon
so has part: feature:90089-90445:-1:exon
so has part: feature:88523-88993:-1:exon
so has part: feature:87381-87498:-1:exon
so has part: feature:86409-86563:-1:exon
so has part: feature:85758-85931:-1:exon
so has part: feature:81990-82112:-1:exon
so has part: feature:78195-78479:-1:exon
so has part: feature:77738-77791:-1:exon
so has part: feature:76892-77029:-1:exon
so has part: feature:76207-76311:-1:exon
so has part: feature:74649-74919:-1:exon
so has part: feature:67449-73496:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:122452-122554:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:113831-114160:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:106127-106246:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:104547-104635:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:104191-104319:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:101686-101777:-1:exon

position:101686:-1
position: 101686
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:101777:-1
position: 101777
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:97505-97726:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:97086-97149:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:96444-96585:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:95585-95791:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:95033-95320:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:94092-94451:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:93436-93571:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:91441-91679:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:91106-91279:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:90089-90445:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:88523-88993:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:87381-87498:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:86409-86563:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:85758-85931:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:81990-82112:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:78195-78479:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:77738-77791:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:76892-77029:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:76207-76311:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:74649-74919:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:67449-73496:-1:exon

SCN8A
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 43150
gene: SCN8A
product: sodium voltage-gated channel alpha subunit 8, transcript variant X3
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_040088503.2
SIO_010081: SCN8A
subclass of: SO_0000673
so part of: SCN8A
location: complement(join(67449..73496,74649..74919,76207..76311,76892..77029,77738..77791,78195..78479,81990..82112,85758..85931,86409..86563,87381..87498,88523..88993,90089..90445,91106..91279,91441..91679,93436..93571,94092..94451,95033..95320,95585..95791,96444..96585,97086..97149,97505..97726,104191..104291))
location: region:67449-104291:-1
so has part: feature:104191-104291:-1:exon
so has part: feature:97505-97726:-1:exon
so has part: feature:97086-97149:-1:exon
so has part: feature:96444-96585:-1:exon
so has part: feature:95585-95791:-1:exon
so has part: feature:95033-95320:-1:exon
so has part: feature:94092-94451:-1:exon
so has part: feature:93436-93571:-1:exon
so has part: feature:91441-91679:-1:exon
so has part: feature:91106-91279:-1:exon
so has part: feature:90089-90445:-1:exon
so has part: feature:88523-88993:-1:exon
so has part: feature:87381-87498:-1:exon
so has part: feature:86409-86563:-1:exon
so has part: feature:85758-85931:-1:exon
so has part: feature:81990-82112:-1:exon
so has part: feature:78195-78479:-1:exon
so has part: feature:77738-77791:-1:exon
so has part: feature:76892-77029:-1:exon
so has part: feature:76207-76311:-1:exon
so has part: feature:74649-74919:-1:exon
so has part: feature:67449-73496:-1:exon

position:104291:-1
position: 104291
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:104191-104291:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:97505-97726:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:97086-97149:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:96444-96585:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:95585-95791:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:95033-95320:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:94092-94451:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:93436-93571:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:91441-91679:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:91106-91279:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:90089-90445:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:88523-88993:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:87381-87498:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:86409-86563:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:85758-85931:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:81990-82112:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:78195-78479:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:77738-77791:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:76892-77029:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:76207-76311:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:74649-74919:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:67449-73496:-1:exon

SCN8A
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 43150
gene: SCN8A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: sodium channel protein type 8 subunit alpha isoform X1
translation: MAARLLAPPGPESFKPFTPESLANIEKHIAELKKKQRSKQDSSHRDDDEDSKPKPNSDLEAGKNLPFIYGDIPKGLVAVPLEDFDPYYMTQKTFVVLNRGKTLFRFSATPALYILSPFNLFRRIAIKILIHSVFSMIIMCTILTNCVFMTFSNPPEWSKNVEYTFTGIYTFESLVKIIARGFCIDGFTFLRDPWNWLDFSVIMMAYVTEFVDLGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKKLSDVMILTVFCLSVFALIGLQLFMGNLRNKCVIWPINVNETFLDNGSRGFDWEEYTNNMSNFYIIPGAPDPLLCGNSSDAGQCPEGYTCMKAGRNPNYGYTSFDTFSWAFLALFRLMTQDFWENLYQLTLRAAGKTYMIFFVLVIFVGSFYLVNLILAVVAMAYEEQNQATLEEAEQKEAEFKAMLEQLKKQQEEAQAAAMVTSAGTVSEDAVEDDGGGRMSRSSSEISKLSSKSAKERRNRRKKRKDKELSEGDEKCDNEKVFKSESEDGMRRKAFRLPDNRLGRKFSIMNQSLLSIPGSPFLSRHNSKSSIFSYKSRFRDPGSENEFADDEHSTVEESEGRRDSLFIPIRGRDRRSSYSGYSGYSVGSRSSRIFPTLRRSVKRNSTVDCNGVVSLIGGPPSSMPGGRILPEGTTEIEIRKKPGGSLLVSMDQVNASYGRKDRTNSVMTGLTNTLVEELEESQRKCPPCWYKFANTFLIWECHPYWMKLKEIVNLIVMDPFVDLAITICIVLNTLFMAMEHHPMTPEFEHVLSVGNLVFTGIFTAEMFLKLIAMDPYYYFQEGWNIFDGFIVSLSLMELSLADVEGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQLFGKSYKECVCKINPECELPRWHMHDFFHSFLIVFRVLCGEWIETMWDCMEVAGQAMCLIVFMMVMVIGNLVVLNLFLALLLSSFSADNLAATDDDGEMNNLQISVIRIKKGIAWTKAKVREFMQAHFKQREADEVKPLDELYDKKVNCIANHTGADINRDIDFLKNGNGTTSGIGSSVEKYIIDEDHMSFINNPNLTVRVPIAVGESDFENLNTEDFSSDTDPDGSKEKLDETSSSEGSTIDIKPEVEEVPVEAPEEYLDPDACFTEGCMQRCKCCQVNIEEGLGKSWWTLRKTCFLIVEHNWFETFIIFMILLSSGALAFEDIYIEQRKTIRTILEYADKVFTYIFILEMLLKWCAYGFVKFFTNAWCWLDFLIVAVSLVSLIANALGYSELGAIKSLRTLRALRPLRALSRFEGMRVVVNALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKYHYCFNETAEHRFEIDVVNNKTDCEALMPPNSTEIRWKNVKINFDNVGAGYLALLQVATFKGWMDIMYAAVDSRKQEEQPKYEDNIYMYIYFVIFIIFGSFFTLNLFIGVIIDNFNQQKKKFGGQDIFMTEEQKKYYNAMKKLGSKKPQKPIPRPLNRIQGAVFDFVTQQAFDIVIMMLICLNMVTMMVETDTQSKQMEDILYWINFVFVIFFTCECVLKMFALRHYYFTVGWNIFDFVVVILSIVGMFLAEIIEKYFVSPTLFRVIRLARIGRILRLIKGAKGIRTLLFALMMSLPALFNIGLLLFLVMFIFSIFGMSNFAYVKHEAGIDDMFNFETFGNSMICLFQITTSAGWDGLLLPILNRPPDCDLDKEHPGSGFKGDCGNPSVGIFFFVSYIIISFLIVVNMYIAIILENFSVATEESADPLSEDDFETFYEIWEKFDPDATQFIEYSKLADFADALEHPLRVPKPNTIELIAMDLPMVSGDRIHCLDILFAFTKRVLGDSGELDILRQQMEERFVASNPSKVSYEPITTTLRRKQEEVSAVVIQRAYRARLARRGFIGRRPAAAKLENGGANREKKEGTPSTASLPSYDSVTKPEKEKQQRAEEGRREKAKRQKDAREAKC
SIO_010081: SCN8A
subclass of: SO_0000673
so part of: SCN8A
location: complement(join(72349..73496,74649..74919,76207..76311,76892..77029,77738..77791,78195..78479,81990..82112,85758..85931,86409..86563,87381..87498,88523..88993,90089..90445,91106..91279,91441..91679,93436..93571,94092..94451,95033..95320,95585..95791,96444..96585,97086..97149,97505..97726,101457..101548,104191..104319,104547..104635,106127..106246,113831..114106))
location: region:72349-114106:-1
so has part: feature:113831-114106:-1:exon
so has part: feature:106127-106246:-1:exon
so has part: feature:104547-104635:-1:exon
so has part: feature:104191-104319:-1:exon
so has part: feature:101457-101548:-1:exon
so has part: feature:97505-97726:-1:exon
so has part: feature:97086-97149:-1:exon
so has part: feature:96444-96585:-1:exon
so has part: feature:95585-95791:-1:exon
so has part: feature:95033-95320:-1:exon
so has part: feature:94092-94451:-1:exon
so has part: feature:93436-93571:-1:exon
so has part: feature:91441-91679:-1:exon
so has part: feature:91106-91279:-1:exon
so has part: feature:90089-90445:-1:exon
so has part: feature:88523-88993:-1:exon
so has part: feature:87381-87498:-1:exon
so has part: feature:86409-86563:-1:exon
so has part: feature:85758-85931:-1:exon
so has part: feature:81990-82112:-1:exon
so has part: feature:78195-78479:-1:exon
so has part: feature:77738-77791:-1:exon
so has part: feature:76892-77029:-1:exon
so has part: feature:76207-76311:-1:exon
so has part: feature:74649-74919:-1:exon
so has part: feature:72349-73496:-1:exon

XP_058279802.1
type: Protein
SIO_000068: ncbiprotein

position:72349:-1
position: 72349
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:114106:-1
position: 114106
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:113831-114106:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:106127-106246:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:104547-104635:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:104191-104319:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:101457-101548:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:97505-97726:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:97086-97149:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:96444-96585:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:95585-95791:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:95033-95320:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:94092-94451:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:93436-93571:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:91441-91679:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:91106-91279:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:90089-90445:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:88523-88993:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:87381-87498:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:86409-86563:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:85758-85931:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:81990-82112:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:78195-78479:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:77738-77791:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:76892-77029:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:76207-76311:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:74649-74919:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:72349-73496:-1:exon

SCN8A
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 43150
gene: SCN8A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: sodium channel protein type 8 subunit alpha isoform X2
translation: MAARLLAPPGPESFKPFTPESLANIEKHIAELKKKQRSKQDSSHRDDDEDSKPKPNSDLEAGKNLPFIYGDIPKGLVAVPLEDFDPYYMTQKTFVVLNRGKTLFRFSATPALYILSPFNLFRRIAIKILIHSVFSMIIMCTILTNCVFMTFSNPPEWSKNVEYTFTGIYTFESLVKIIARGFCIDGFTFLRDPWNWLDFSVIMMAYITEFVNLGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKKLSDVMILTVFCLSVFALIGLQLFMGNLRNKCVIWPINVNETFLDNGSRGFDWEEYTNNMSNFYIIPGAPDPLLCGNSSDAGQCPEGYTCMKAGRNPNYGYTSFDTFSWAFLALFRLMTQDFWENLYQLTLRAAGKTYMIFFVLVIFVGSFYLVNLILAVVAMAYEEQNQATLEEAEQKEAEFKAMLEQLKKQQEEAQAAAMVTSAGTVSEDAVEDDGGGRMSRSSSEISKLSSKSAKERRNRRKKRKDKELSEGDEKCDNEKVFKSESEDGMRRKAFRLPDNRLGRKFSIMNQSLLSIPGSPFLSRHNSKSSIFSYKSRFRDPGSENEFADDEHSTVEESEGRRDSLFIPIRGRDRRSSYSGYSGYSVGSRSSRIFPTLRRSVKRNSTVDCNGVVSLIGGPPSSMPGGRILPEGTTEIEIRKKPGGSLLVSMDQVNASYGRKDRTNSVMTGLTNTLVEELEESQRKCPPCWYKFANTFLIWECHPYWMKLKEIVNLIVMDPFVDLAITICIVLNTLFMAMEHHPMTPEFEHVLSVGNLVFTGIFTAEMFLKLIAMDPYYYFQEGWNIFDGFIVSLSLMELSLADVEGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQLFGKSYKECVCKINPECELPRWHMHDFFHSFLIVFRVLCGEWIETMWDCMEVAGQAMCLIVFMMVMVIGNLVVLNLFLALLLSSFSADNLAATDDDGEMNNLQISVIRIKKGIAWTKAKVREFMQAHFKQREADEVKPLDELYDKKVNCIANHTGADINRDIDFLKNGNGTTSGIGSSVEKYIIDEDHMSFINNPNLTVRVPIAVGESDFENLNTEDFSSDTDPDGSKEKLDETSSSEGSTIDIKPEVEEVPVEAPEEYLDPDACFTEGCMQRCKCCQVNIEEGLGKSWWTLRKTCFLIVEHNWFETFIIFMILLSSGALAFEDIYIEQRKTIRTILEYADKVFTYIFILEMLLKWCAYGFVKFFTNAWCWLDFLIVAVSLVSLIANALGYSELGAIKSLRTLRALRPLRALSRFEGMRVVVNALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKYHYCFNETAEHRFEIDVVNNKTDCEALMPPNSTEIRWKNVKINFDNVGAGYLALLQVATFKGWMDIMYAAVDSRKQEEQPKYEDNIYMYIYFVIFIIFGSFFTLNLFIGVIIDNFNQQKKKFGGQDIFMTEEQKKYYNAMKKLGSKKPQKPIPRPLNRIQGAVFDFVTQQAFDIVIMMLICLNMVTMMVETDTQSKQMEDILYWINFVFVIFFTCECVLKMFALRHYYFTVGWNIFDFVVVILSIVGMFLAEIIEKYFVSPTLFRVIRLARIGRILRLIKGAKGIRTLLFALMMSLPALFNIGLLLFLVMFIFSIFGMSNFAYVKHEAGIDDMFNFETFGNSMICLFQITTSAGWDGLLLPILNRPPDCDLDKEHPGSGFKGDCGNPSVGIFFFVSYIIISFLIVVNMYIAIILENFSVATEESADPLSEDDFETFYEIWEKFDPDATQFIEYSKLADFADALEHPLRVPKPNTIELIAMDLPMVSGDRIHCLDILFAFTKRVLGDSGELDILRQQMEERFVASNPSKVSYEPITTTLRRKQEEVSAVVIQRAYRARLARRGFIGRRPAAAKLENGGANREKKEGTPSTASLPSYDSVTKPEKEKQQRAEEGRREKAKRQKDAREAKC
SIO_010081: SCN8A
subclass of: SO_0000673
so part of: SCN8A
location: complement(join(72349..73496,74649..74919,76207..76311,76892..77029,77738..77791,78195..78479,81990..82112,85758..85931,86409..86563,87381..87498,88523..88993,90089..90445,91106..91279,91441..91679,93436..93571,94092..94451,95033..95320,95585..95791,96444..96585,97086..97149,97505..97726,101686..101777,104191..104319,104547..104635,106127..106246,113831..114106))
location: region:72349-114106:-1
so has part: feature:113831-114106:-1:exon
so has part: feature:106127-106246:-1:exon
so has part: feature:104547-104635:-1:exon
so has part: feature:104191-104319:-1:exon
so has part: feature:101686-101777:-1:exon
so has part: feature:97505-97726:-1:exon
so has part: feature:97086-97149:-1:exon
so has part: feature:96444-96585:-1:exon
so has part: feature:95585-95791:-1:exon
so has part: feature:95033-95320:-1:exon
so has part: feature:94092-94451:-1:exon
so has part: feature:93436-93571:-1:exon
so has part: feature:91441-91679:-1:exon
so has part: feature:91106-91279:-1:exon
so has part: feature:90089-90445:-1:exon
so has part: feature:88523-88993:-1:exon
so has part: feature:87381-87498:-1:exon
so has part: feature:86409-86563:-1:exon
so has part: feature:85758-85931:-1:exon
so has part: feature:81990-82112:-1:exon
so has part: feature:78195-78479:-1:exon
so has part: feature:77738-77791:-1:exon
so has part: feature:76892-77029:-1:exon
so has part: feature:76207-76311:-1:exon
so has part: feature:74649-74919:-1:exon
so has part: feature:72349-73496:-1:exon

XP_058279803.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:113831-114106:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:106127-106246:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:104547-104635:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:104191-104319:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:101686-101777:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:97505-97726:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:97086-97149:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:96444-96585:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:95585-95791:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:95033-95320:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:94092-94451:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:93436-93571:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:91441-91679:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:91106-91279:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:90089-90445:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:88523-88993:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:87381-87498:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:86409-86563:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:85758-85931:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:81990-82112:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:78195-78479:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:77738-77791:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:76892-77029:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:76207-76311:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:74649-74919:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:72349-73496:-1:exon

SCN8A
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 43150
gene: SCN8A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: sodium channel protein type 8 subunit alpha isoform X3
translation: MILTVFCLSVFALIGLQLFMGNLRNKCVIWPINVNETFLDNGSRGFDWEEYTNNMSNFYIIPGAPDPLLCGNSSDAGQCPEGYTCMKAGRNPNYGYTSFDTFSWAFLALFRLMTQDFWENLYQLTLRAAGKTYMIFFVLVIFVGSFYLVNLILAVVAMAYEEQNQATLEEAEQKEAEFKAMLEQLKKQQEEAQAAAMVTSAGTVSEDAVEDDGGGRMSRSSSEISKLSSKSAKERRNRRKKRKDKELSEGDEKCDNEKVFKSESEDGMRRKAFRLPDNRLGRKFSIMNQSLLSIPGSPFLSRHNSKSSIFSYKSRFRDPGSENEFADDEHSTVEESEGRRDSLFIPIRGRDRRSSYSGYSGYSVGSRSSRIFPTLRRSVKRNSTVDCNGVVSLIGGPPSSMPGGRILPEGTTEIEIRKKPGGSLLVSMDQVNASYGRKDRTNSVMTGLTNTLVEELEESQRKCPPCWYKFANTFLIWECHPYWMKLKEIVNLIVMDPFVDLAITICIVLNTLFMAMEHHPMTPEFEHVLSVGNLVFTGIFTAEMFLKLIAMDPYYYFQEGWNIFDGFIVSLSLMELSLADVEGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQLFGKSYKECVCKINPECELPRWHMHDFFHSFLIVFRVLCGEWIETMWDCMEVAGQAMCLIVFMMVMVIGNLVVLNLFLALLLSSFSADNLAATDDDGEMNNLQISVIRIKKGIAWTKAKVREFMQAHFKQREADEVKPLDELYDKKVNCIANHTGADINRDIDFLKNGNGTTSGIGSSVEKYIIDEDHMSFINNPNLTVRVPIAVGESDFENLNTEDFSSDTDPDGSKEKLDETSSSEGSTIDIKPEVEEVPVEAPEEYLDPDACFTEGCMQRCKCCQVNIEEGLGKSWWTLRKTCFLIVEHNWFETFIIFMILLSSGALAFEDIYIEQRKTIRTILEYADKVFTYIFILEMLLKWCAYGFVKFFTNAWCWLDFLIVAVSLVSLIANALGYSELGAIKSLRTLRALRPLRALSRFEGMRVVVNALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKYHYCFNETAEHRFEIDVVNNKTDCEALMPPNSTEIRWKNVKINFDNVGAGYLALLQVATFKGWMDIMYAAVDSRKQEEQPKYEDNIYMYIYFVIFIIFGSFFTLNLFIGVIIDNFNQQKKKFGGQDIFMTEEQKKYYNAMKKLGSKKPQKPIPRPLNRIQGAVFDFVTQQAFDIVIMMLICLNMVTMMVETDTQSKQMEDILYWINFVFVIFFTCECVLKMFALRHYYFTVGWNIFDFVVVILSIVGMFLAEIIEKYFVSPTLFRVIRLARIGRILRLIKGAKGIRTLLFALMMSLPALFNIGLLLFLVMFIFSIFGMSNFAYVKHEAGIDDMFNFETFGNSMICLFQITTSAGWDGLLLPILNRPPDCDLDKEHPGSGFKGDCGNPSVGIFFFVSYIIISFLIVVNMYIAIILENFSVATEESADPLSEDDFETFYEIWEKFDPDATQFIEYSKLADFADALEHPLRVPKPNTIELIAMDLPMVSGDRIHCLDILFAFTKRVLGDSGELDILRQQMEERFVASNPSKVSYEPITTTLRRKQEEVSAVVIQRAYRARLARRGFIGRRPAAAKLENGGANREKKEGTPSTASLPSYDSVTKPEKEKQQRAEEGRREKAKRQKDAREAKC
SIO_010081: SCN8A
subclass of: SO_0000673
so part of: SCN8A
location: complement(join(72349..73496,74649..74919,76207..76311,76892..77029,77738..77791,78195..78479,81990..82112,85758..85931,86409..86563,87381..87498,88523..88993,90089..90445,91106..91279,91441..91679,93436..93571,94092..94451,95033..95320,95585..95791,96444..96585,97086..97149,97505..97670))
location: region:72349-97670:-1
so has part: feature:97505-97670:-1:exon
so has part: feature:97086-97149:-1:exon
so has part: feature:96444-96585:-1:exon
so has part: feature:95585-95791:-1:exon
so has part: feature:95033-95320:-1:exon
so has part: feature:94092-94451:-1:exon
so has part: feature:93436-93571:-1:exon
so has part: feature:91441-91679:-1:exon
so has part: feature:91106-91279:-1:exon
so has part: feature:90089-90445:-1:exon
so has part: feature:88523-88993:-1:exon
so has part: feature:87381-87498:-1:exon
so has part: feature:86409-86563:-1:exon
so has part: feature:85758-85931:-1:exon
so has part: feature:81990-82112:-1:exon
so has part: feature:78195-78479:-1:exon
so has part: feature:77738-77791:-1:exon
so has part: feature:76892-77029:-1:exon
so has part: feature:76207-76311:-1:exon
so has part: feature:74649-74919:-1:exon
so has part: feature:72349-73496:-1:exon

XP_039944437.1
type: Protein
SIO_000068: ncbiprotein

position:97670:-1
position: 97670
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:97505-97670:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:97086-97149:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:96444-96585:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:95585-95791:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:95033-95320:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:94092-94451:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:93436-93571:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:91441-91679:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:91106-91279:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:90089-90445:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:88523-88993:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:87381-87498:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:86409-86563:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:85758-85931:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:81990-82112:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:78195-78479:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:77738-77791:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:76892-77029:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:76207-76311:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:74649-74919:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:72349-73496:-1:exon

TMT1A
type: Gene
subclass of: SO_0000704
RO_0002162: 43150
gene: TMT1A
note: thiol methyltransferase 1A; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 125003..127604
location: region:125003-127604:1
so has part: feature:125003-127604:1:exon
subclass of: SO_0000010

120764519
type: Gene
SIO_000068: ncbigene

position:125003:1
position: 125003
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:127604:1
position: 127604
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:125003-127604:1:exon

TMT1A
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 43150
gene: TMT1A
product: thiol methyltransferase 1A
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_040088515.2
SIO_010081: TMT1A
subclass of: SO_0000673
so part of: TMT1A
location: join(125003..125694,126836..127604)
location: region:125003-127604:1
so has part: feature:125003-125694:1:exon
so has part: feature:126836-127604:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:125003-125694:1:exon

position:125694:1
position: 125694
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:126836-127604:1:exon

position:126836:1
position: 126836
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

TMT1A
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 43150
gene: TMT1A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: N6-adenosine-methyltransferase TMT1A
translation: MPKMPEVGASVLLLRACLALLASPIYLLSFLGIWEPFCRKVFFPFILDKICVVHDKKSKKHKQELFRNLPDFRGPSGALRLLEIGTGSGSNFQFYPPGCKVTCTDINPNFQEGLAKNMKKNQHLQYEGFLVAAGEDLGQVPSGSVDAVVCTLVLCSVHSVSSTLREVLRVLRPGGAFYFLEHVAAEHSSWRYFWQQVCYPTWKLVFAGCCLTRELWKNLEEAKFSELKIQHISVAMPWMPIEPHIVGYGVK
SIO_010081: TMT1A
subclass of: SO_0000673
so part of: TMT1A
location: join(125176..125694,126836..127072)
location: region:125176-127072:1
so has part: feature:125176-125694:1:exon
so has part: feature:126836-127072:1:exon

XP_039944449.1
type: Protein
SIO_000068: ncbiprotein

position:125176:1
position: 125176
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:127072:1
position: 127072
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:125176-125694:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:126836-127072:1:exon

TMPRSS12
type: Gene
subclass of: SO_0000704
RO_0002162: 43150
gene: TMPRSS12
note: transmembrane serine protease 12; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 128067..132977
location: region:128067-132977:1
so has part: feature:128067-132977:1:exon
subclass of: SO_0000010

120764375
type: Gene
SIO_000068: ncbigene

position:128067:1
position: 128067
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:132977:1
position: 132977
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:128067-132977:1:exon

TMPRSS12
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 43150
gene: TMPRSS12
product: transmembrane serine protease 12
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins
transcript id: XM_040088327.1
SIO_010081: TMPRSS12
subclass of: SO_0000673
so part of: TMPRSS12
location: join(128067..128154,129107..129305,130769..131040,132034..132176,132632..132977)
location: region:128067-132977:1
so has part: feature:128067-128154:1:exon
so has part: feature:129107-129305:1:exon
so has part: feature:130769-131040:1:exon
so has part: feature:132034-132176:1:exon
so has part: feature:132632-132977:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:128067-128154:1:exon

position:128154:1
position: 128154
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:129107-129305:1:exon

position:129107:1
position: 129107
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:129305:1
position: 129305
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:130769-131040:1:exon

position:130769:1
position: 130769
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:131040:1
position: 131040
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:132034-132176:1:exon

position:132034:1
position: 132034
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:132176:1
position: 132176
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:132632-132977:1:exon

position:132632:1
position: 132632
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

TMPRSS12
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 43150
gene: TMPRSS12
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transmembrane protease serine 12
translation: MRRALPALPLLLLLAGPLPAGAAPTDPGDECQQQLPLARSVASWIVGGHDAPEGAWPWVVSLQVLRGGVRFVHLCGGVLLGRRAVLTAGHCVDGRTDPCSWRAVLGVHNLQKHGPHTARRRIRRIMVHSHFRRETFENDVALFELKWAVRYSLYIQPVCLPPAALVRLLENSSDCYISGWGRTAEKGKTSPVLKQAHVGILPPSLCNSSQGYAGLMNDKALCAGAWAGGTDTCQGDSGGPLVCYHPDTDMYYLTGIASFGVGCGRPKYPGIYVRLSQYRKWIKAKLLLTNKTQKPVSTTLTILLTLVHTVLAQAL
SIO_010081: TMPRSS12
subclass of: SO_0000673
so part of: TMPRSS12
location: join(128067..128154,129107..129305,130769..131040,132034..132176,132632..132877)
location: region:128067-132877:1
so has part: feature:128067-128154:1:exon
so has part: feature:129107-129305:1:exon
so has part: feature:130769-131040:1:exon
so has part: feature:132034-132176:1:exon
so has part: feature:132632-132877:1:exon

XP_039944261.1
type: Protein
SIO_000068: ncbiprotein

position:132877:1
position: 132877
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:128067-128154:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:129107-129305:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:130769-131040:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:132034-132176:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:132632-132877:1:exon

ATF1
type: Gene
subclass of: SO_0000704
RO_0002162: 43150
gene: ATF1
note: activating transcription factor 1; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(133513..145944)
location: region:133513-145944:-1
so has part: feature:133513-145944:-1:exon
subclass of: SO_0000010

120764422
type: Gene
SIO_000068: ncbigene

position:133513:-1
position: 133513
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:145944:-1
position: 145944
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:133513-145944:-1:exon

ATF1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 43150
gene: ATF1
product: activating transcription factor 1
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_040088388.2
SIO_010081: ATF1
subclass of: SO_0000673
so part of: ATF1
location: complement(join(133513..136430,137271..137430,137509..137688,138327..138457,138746..138846,140136..140264,141458..141571,145879..145944))
location: region:133513-145944:-1
so has part: feature:145879-145944:-1:exon
so has part: feature:141458-141571:-1:exon
so has part: feature:140136-140264:-1:exon
so has part: feature:138746-138846:-1:exon
so has part: feature:138327-138457:-1:exon
so has part: feature:137509-137688:-1:exon
so has part: feature:137271-137430:-1:exon
so has part: feature:133513-136430:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:145879-145944:-1:exon

position:145879:-1
position: 145879
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:141458-141571:-1:exon

position:141458:-1
position: 141458
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:141571:-1
position: 141571
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:140136-140264:-1:exon

position:140136:-1
position: 140136
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:140264:-1
position: 140264
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:138746-138846:-1:exon

position:138746:-1
position: 138746
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:138846:-1
position: 138846
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:138327-138457:-1:exon

position:138327:-1
position: 138327
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:138457:-1
position: 138457
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:137509-137688:-1:exon

position:137509:-1
position: 137509
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:137688:-1
position: 137688
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:137271-137430:-1:exon

position:137271:-1
position: 137271
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:137430:-1
position: 137430
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:133513-136430:-1:exon

position:136430:-1
position: 136430
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

ATF1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 43150
gene: ATF1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cyclic AMP-dependent transcription factor ATF-1
translation: MMEEVHKGGSSSSVTSQPSAVQGTTLQAAQLSHIAQQMSLRGSAPLTVVQLPGEQVQVQGVIQTAQSSSVIHSPQVQSVQVSSLSESEDSQDSSDSIGSSQKARGILARRPSYRKILKDLSSEDTRDRKGDEESPGVSTVTSMSVPTPIYQTSTGQYIAIAANGLQLAGPGADGVQGLQTLTMANAGGSQPGTTILQYAQTSDGQQILVPSNQVVVQTASGDMQTYQIRTTPTTSSLPQTVVMTSPVTLTSQTSKTDDPQLKREIRLMKNREAARECRRKKKEYVKCLENRVAVLENQNKTLIEELKTLKDLYCHKSV
SIO_010081: ATF1
subclass of: SO_0000673
so part of: ATF1
location: complement(join(136286..136430,137271..137430,137509..137688,138327..138457,138746..138846,140136..140264,141458..141568))
location: region:136286-141568:-1
so has part: feature:141458-141568:-1:exon
so has part: feature:140136-140264:-1:exon
so has part: feature:138746-138846:-1:exon
so has part: feature:138327-138457:-1:exon
so has part: feature:137509-137688:-1:exon
so has part: feature:137271-137430:-1:exon
so has part: feature:136286-136430:-1:exon

XP_039944322.1
type: Protein
SIO_000068: ncbiprotein

position:136286:-1
position: 136286
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:141568:-1
position: 141568
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:141458-141568:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:140136-140264:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:138746-138846:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:138327-138457:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:137509-137688:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:137271-137430:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:136286-136430:-1:exon

DIP2B
type: Gene
subclass of: SO_0000704
RO_0002162: 43150
gene: DIP2B
note: disco interacting protein 2 homolog B; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(147168..207210)
location: region:147168-207210:-1
so has part: feature:147168-207210:-1:exon
subclass of: SO_0000010

120764402
type: Gene
SIO_000068: ncbigene

position:147168:-1
position: 147168
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:207210:-1
position: 207210
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:147168-207210:-1:exon

DIP2B
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 43150
gene: DIP2B
product: disco interacting protein 2 homolog B, transcript variant X3
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_040088356.2
SIO_010081: DIP2B
subclass of: SO_0000673
so part of: DIP2B
location: complement(join(147168..150599,151037..151160,151760..151937,152462..152536,153072..153129,153267..153328,153824..153994,154917..155085,155616..155746,156501..156610,157043..157154,157772..157893,158248..158371,158921..159001,159120..159229,159537..159738,160829..160943,161647..161774,161900..161980,162275..162411,162615..162754,163306..163420,163955..164074,164782..164875,165262..165326,166275..166377,167059..167168,167666..167789,168961..169071,169468..169559,169769..169966,170567..170686,170969..171112,175164..175289,176959..177102,181409..181480,207114..207210))
location: region:147168-207210:-1
so has part: feature:207114-207210:-1:exon
so has part: feature:181409-181480:-1:exon
so has part: feature:176959-177102:-1:exon
so has part: feature:175164-175289:-1:exon
so has part: feature:170969-171112:-1:exon
so has part: feature:170567-170686:-1:exon
so has part: feature:169769-169966:-1:exon
so has part: feature:169468-169559:-1:exon
so has part: feature:168961-169071:-1:exon
so has part: feature:167666-167789:-1:exon
so has part: feature:167059-167168:-1:exon
so has part: feature:166275-166377:-1:exon
so has part: feature:165262-165326:-1:exon
so has part: feature:164782-164875:-1:exon
so has part: feature:163955-164074:-1:exon
so has part: feature:163306-163420:-1:exon
so has part: feature:162615-162754:-1:exon
so has part: feature:162275-162411:-1:exon
so has part: feature:161900-161980:-1:exon
so has part: feature:161647-161774:-1:exon
so has part: feature:160829-160943:-1:exon
so has part: feature:159537-159738:-1:exon
so has part: feature:159120-159229:-1:exon
so has part: feature:158921-159001:-1:exon
so has part: feature:158248-158371:-1:exon
so has part: feature:157772-157893:-1:exon
so has part: feature:157043-157154:-1:exon
so has part: feature:156501-156610:-1:exon
so has part: feature:155616-155746:-1:exon
so has part: feature:154917-155085:-1:exon
so has part: feature:153824-153994:-1:exon
so has part: feature:153267-153328:-1:exon
so has part: feature:153072-153129:-1:exon
so has part: feature:152462-152536:-1:exon
so has part: feature:151760-151937:-1:exon
so has part: feature:151037-151160:-1:exon
so has part: feature:147168-150599:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:207114-207210:-1:exon

position:207114:-1
position: 207114
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:181409-181480:-1:exon

position:181409:-1
position: 181409
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:181480:-1
position: 181480
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:176959-177102:-1:exon

position:176959:-1
position: 176959
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:177102:-1
position: 177102
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:175164-175289:-1:exon

position:175164:-1
position: 175164
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:175289:-1
position: 175289
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:170969-171112:-1:exon

position:170969:-1
position: 170969
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:171112:-1
position: 171112
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:170567-170686:-1:exon

position:170567:-1
position: 170567
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:170686:-1
position: 170686
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:169769-169966:-1:exon

position:169769:-1
position: 169769
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:169966:-1
position: 169966
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:169468-169559:-1:exon

position:169468:-1
position: 169468
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:169559:-1
position: 169559
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:168961-169071:-1:exon

position:168961:-1
position: 168961
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:169071:-1
position: 169071
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:167666-167789:-1:exon

position:167666:-1
position: 167666
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:167789:-1
position: 167789
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:167059-167168:-1:exon

position:167059:-1
position: 167059
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:167168:-1
position: 167168
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:166275-166377:-1:exon

position:166275:-1
position: 166275
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:166377:-1
position: 166377
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:165262-165326:-1:exon

position:165262:-1
position: 165262
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:165326:-1
position: 165326
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:164782-164875:-1:exon

position:164782:-1
position: 164782
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:164875:-1
position: 164875
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:163955-164074:-1:exon

position:163955:-1
position: 163955
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:164074:-1
position: 164074
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:163306-163420:-1:exon

position:163306:-1
position: 163306
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:163420:-1
position: 163420
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:162615-162754:-1:exon

position:162615:-1
position: 162615
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:162754:-1
position: 162754
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:162275-162411:-1:exon

position:162275:-1
position: 162275
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:162411:-1
position: 162411
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:161900-161980:-1:exon

position:161900:-1
position: 161900
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:161980:-1
position: 161980
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:161647-161774:-1:exon

position:161647:-1
position: 161647
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:161774:-1
position: 161774
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:160829-160943:-1:exon

position:160829:-1
position: 160829
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:160943:-1
position: 160943
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:159537-159738:-1:exon

position:159537:-1
position: 159537
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:159738:-1
position: 159738
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:159120-159229:-1:exon

position:159120:-1
position: 159120
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:159229:-1
position: 159229
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:158921-159001:-1:exon

position:158921:-1
position: 158921
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:159001:-1
position: 159001
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:158248-158371:-1:exon

position:158248:-1
position: 158248
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:158371:-1
position: 158371
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 26
SIO_000628: feature:157772-157893:-1:exon

position:157772:-1
position: 157772
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:157893:-1
position: 157893
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 27
SIO_000628: feature:157043-157154:-1:exon

position:157043:-1
position: 157043
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:157154:-1
position: 157154
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 28
SIO_000628: feature:156501-156610:-1:exon

position:156501:-1
position: 156501
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:156610:-1
position: 156610
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 29
SIO_000628: feature:155616-155746:-1:exon

position:155616:-1
position: 155616
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:155746:-1
position: 155746
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 30
SIO_000628: feature:154917-155085:-1:exon

position:154917:-1
position: 154917
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:155085:-1
position: 155085
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 31
SIO_000628: feature:153824-153994:-1:exon

position:153824:-1
position: 153824
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:153994:-1
position: 153994
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 32
SIO_000628: feature:153267-153328:-1:exon

position:153267:-1
position: 153267
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:153328:-1
position: 153328
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 33
SIO_000628: feature:153072-153129:-1:exon

position:153072:-1
position: 153072
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:153129:-1
position: 153129
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 34
SIO_000628: feature:152462-152536:-1:exon

position:152462:-1
position: 152462
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:152536:-1
position: 152536
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 35
SIO_000628: feature:151760-151937:-1:exon

position:151760:-1
position: 151760
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:151937:-1
position: 151937
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 36
SIO_000628: feature:151037-151160:-1:exon

position:151037:-1
position: 151037
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:151160:-1
position: 151160
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 37
SIO_000628: feature:147168-150599:-1:exon

position:150599:-1
position: 150599
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

DIP2B
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 43150
gene: DIP2B
product: disco interacting protein 2 homolog B, transcript variant X2
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_040088355.2
SIO_010081: DIP2B
subclass of: SO_0000673
so part of: DIP2B
location: complement(join(147168..150599,151037..151160,151760..151937,152462..152536,153072..153129,153267..153328,153824..153994,154917..155085,155616..155746,156501..156610,157043..157154,157772..157893,158248..158371,158921..159001,159120..159229,159537..159738,160829..160943,161647..161774,161900..161980,162275..162411,162615..162754,163306..163420,163955..164074,164782..164875,165262..165326,166275..166377,167059..167168,167666..167789,168979..169071,169468..169559,169769..169966,170567..170686,170969..171112,173351..173563,175164..175289,176959..177102,181409..181480,207114..207210))
location: region:147168-207210:-1
so has part: feature:207114-207210:-1:exon
so has part: feature:181409-181480:-1:exon
so has part: feature:176959-177102:-1:exon
so has part: feature:175164-175289:-1:exon
so has part: feature:173351-173563:-1:exon
so has part: feature:170969-171112:-1:exon
so has part: feature:170567-170686:-1:exon
so has part: feature:169769-169966:-1:exon
so has part: feature:169468-169559:-1:exon
so has part: feature:168979-169071:-1:exon
so has part: feature:167666-167789:-1:exon
so has part: feature:167059-167168:-1:exon
so has part: feature:166275-166377:-1:exon
so has part: feature:165262-165326:-1:exon
so has part: feature:164782-164875:-1:exon
so has part: feature:163955-164074:-1:exon
so has part: feature:163306-163420:-1:exon
so has part: feature:162615-162754:-1:exon
so has part: feature:162275-162411:-1:exon
so has part: feature:161900-161980:-1:exon
so has part: feature:161647-161774:-1:exon
so has part: feature:160829-160943:-1:exon
so has part: feature:159537-159738:-1:exon
so has part: feature:159120-159229:-1:exon
so has part: feature:158921-159001:-1:exon
so has part: feature:158248-158371:-1:exon
so has part: feature:157772-157893:-1:exon
so has part: feature:157043-157154:-1:exon
so has part: feature:156501-156610:-1:exon
so has part: feature:155616-155746:-1:exon
so has part: feature:154917-155085:-1:exon
so has part: feature:153824-153994:-1:exon
so has part: feature:153267-153328:-1:exon
so has part: feature:153072-153129:-1:exon
so has part: feature:152462-152536:-1:exon
so has part: feature:151760-151937:-1:exon
so has part: feature:151037-151160:-1:exon
so has part: feature:147168-150599:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:207114-207210:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:181409-181480:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:176959-177102:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:175164-175289:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:173351-173563:-1:exon

position:173351:-1
position: 173351
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:173563:-1
position: 173563
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:170969-171112:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:170567-170686:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:169769-169966:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:169468-169559:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:168979-169071:-1:exon

position:168979:-1
position: 168979
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:167666-167789:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:167059-167168:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:166275-166377:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:165262-165326:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:164782-164875:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:163955-164074:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:163306-163420:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:162615-162754:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:162275-162411:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:161900-161980:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:161647-161774:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:160829-160943:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:159537-159738:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:159120-159229:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:158921-159001:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:158248-158371:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:157772-157893:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:157043-157154:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:156501-156610:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:155616-155746:-1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:154917-155085:-1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:153824-153994:-1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:153267-153328:-1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:153072-153129:-1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:152462-152536:-1:exon

urn:…
SIO_000300: 36
SIO_000628: feature:151760-151937:-1:exon

urn:…
SIO_000300: 37
SIO_000628: feature:151037-151160:-1:exon

urn:…
SIO_000300: 38
SIO_000628: feature:147168-150599:-1:exon

DIP2B
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 43150
gene: DIP2B
product: disco interacting protein 2 homolog B, transcript variant X1
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_040088354.2
SIO_010081: DIP2B
subclass of: SO_0000673
so part of: DIP2B
location: complement(join(147168..150599,151037..151160,151760..151937,152462..152536,153072..153129,153267..153328,153824..153994,154917..155085,155616..155746,156501..156610,157043..157154,157772..157893,158248..158371,158921..159001,159120..159229,159537..159738,160829..160943,161647..161774,161900..161980,162275..162411,162615..162754,163306..163420,163955..164074,164782..164875,165262..165326,166275..166377,167059..167168,167666..167789,168961..169071,169468..169559,169769..169966,170567..170686,170969..171112,173351..173563,175164..175289,176959..177102,181409..181480,207114..207210))
location: region:147168-207210:-1
so has part: feature:207114-207210:-1:exon
so has part: feature:181409-181480:-1:exon
so has part: feature:176959-177102:-1:exon
so has part: feature:175164-175289:-1:exon
so has part: feature:173351-173563:-1:exon
so has part: feature:170969-171112:-1:exon
so has part: feature:170567-170686:-1:exon
so has part: feature:169769-169966:-1:exon
so has part: feature:169468-169559:-1:exon
so has part: feature:168961-169071:-1:exon
so has part: feature:167666-167789:-1:exon
so has part: feature:167059-167168:-1:exon
so has part: feature:166275-166377:-1:exon
so has part: feature:165262-165326:-1:exon
so has part: feature:164782-164875:-1:exon
so has part: feature:163955-164074:-1:exon
so has part: feature:163306-163420:-1:exon
so has part: feature:162615-162754:-1:exon
so has part: feature:162275-162411:-1:exon
so has part: feature:161900-161980:-1:exon
so has part: feature:161647-161774:-1:exon
so has part: feature:160829-160943:-1:exon
so has part: feature:159537-159738:-1:exon
so has part: feature:159120-159229:-1:exon
so has part: feature:158921-159001:-1:exon
so has part: feature:158248-158371:-1:exon
so has part: feature:157772-157893:-1:exon
so has part: feature:157043-157154:-1:exon
so has part: feature:156501-156610:-1:exon
so has part: feature:155616-155746:-1:exon
so has part: feature:154917-155085:-1:exon
so has part: feature:153824-153994:-1:exon
so has part: feature:153267-153328:-1:exon
so has part: feature:153072-153129:-1:exon
so has part: feature:152462-152536:-1:exon
so has part: feature:151760-151937:-1:exon
so has part: feature:151037-151160:-1:exon
so has part: feature:147168-150599:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:207114-207210:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:181409-181480:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:176959-177102:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:175164-175289:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:173351-173563:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:170969-171112:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:170567-170686:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:169769-169966:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:169468-169559:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:168961-169071:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:167666-167789:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:167059-167168:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:166275-166377:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:165262-165326:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:164782-164875:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:163955-164074:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:163306-163420:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:162615-162754:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:162275-162411:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:161900-161980:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:161647-161774:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:160829-160943:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:159537-159738:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:159120-159229:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:158921-159001:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:158248-158371:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:157772-157893:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:157043-157154:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:156501-156610:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:155616-155746:-1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:154917-155085:-1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:153824-153994:-1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:153267-153328:-1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:153072-153129:-1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:152462-152536:-1:exon

urn:…
SIO_000300: 36
SIO_000628: feature:151760-151937:-1:exon

urn:…
SIO_000300: 37
SIO_000628: feature:151037-151160:-1:exon

urn:…
SIO_000300: 38
SIO_000628: feature:147168-150599:-1:exon

DIP2B
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 43150
gene: DIP2B
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: disco-interacting protein 2 homolog B isoform X3
translation: MAEPAAVSSLPREVREQLAELELELSEGDITQKGYEKKRAKLLAPYVPQTQGVDPALQKESRPQMPVPSAAPASASSSSSSSKFHRARSGGARDERYRSDIHTEAVQAALAKHKEQKMALPMPTKRRSTFVQSPADACTPPESFSVPPDVTATTSTPSARPAAIDLPPSGIVKGMHKGSNRSSLMDTADGVPVSSRVSTKIQQLLNTLKRPKRPPLKEFFVDDFEEIVEVPQPDPNQPKPEGQQMTPVKGEPLGVVCNWPPALEAALQRWGTTQAKCPCLTALDVTGKPVYTLTYGKLWSRSLKLAYTLLNKLGTKNEPVLKPGDRVALVYPNNDPVMFMVAFYGCLLAEVIPVPIEVPLTRKDAGGQQIGFLLGSCGIALALTTEVCLKGLPKTQNGEIVQFKGWPRLKWVVTDSKYLSKSPKDWQPNISAAGTEPAYIEYKTSKEGSVMGVTVSRVAMLAHCQALSQACNYSEGETIVNVLDFKKDAGLWHGILTNVMNKLHTISVPYSVMKTCPLSWVQRVHAHKAKVALVKCRDLHWAMMAHRDQRDVSLSSLRMLIVTDGANPWSVSSCDAFLSLFQGHGLKPEAICPCATSPEAMTVAIRRPGVPGAPLPGRAILSMNGLSFGVIRVNTEDKNSALTVQDVGHVMPGGMMCIVKPDGPPQLCKTDEIGEICVSSRAGGMMYYGLAGVTKNTFEVIPVSSSGSPVGDVPFVRSGLLGFVGPGSLVFVVGKMDGLLTVSGRRHNADDIVATGLAVESIKTVYRGRIAVFSVSVFYDERIVVVAEQRPDASEEDSFQWMSRVLQAIDSIHQVGVYCLALVPANTLPKTPLGGIHISQTKQHFLEGSLHPCNILMCPHTCVTNLPKPRQKQPGVGPASVMVGNLVAGKRIAQASGRDLGQIEDNDLVKKHQFLTEVLQWRAQATPDHPLFLLLNAKGTTVCTATCLQLHKKAERIASVLCDKGHLNAGDNVVLLYPPGIELITAFYGCLYSGCVPVTVRPPHAQSLVATLPTVRMIVEVSKAACILTTQTLMRLLKSREAAGAVDVKTWPTIIDTDDLPRKRLAQIYKPPTPEMLAYLDFSVSTTGMLTGVKMSHAAVSGLCRAIKLQCELYSSRQIAICLDPYCGLGFVLWCLCSVYSGHQSILIPPMELESNLFLWLSTVSQYKIRDTFCSYSVMELCTKGLGNQVEMLKARGINLSCVRTCVVVAEERPRVSLTQSFSKLFKDIGLSSRAVSTTFGSRVNVAICLQGTSGPDPTTVYVDLKSLRHDRVRLVERGAPQSLLLSESGKILPGVKVVIVNPETKGPLGDSHLGEIWVNSPHTASGYYTIYDNETLQADHFNTRLSFGDAAQTLWARTGYLGFVRRTELTAASGERHDALYVVGALDETLELRGLRYHPIDIETSVSRTHRSIAECAVFTWTNLLVVVVELCGCEQEALDLVPLVTNVVLEEHYLIVGVVVVVDPGVIPINSRGEKQRMHLRDSFLADQLDPIYVAYNM
SIO_010081: DIP2B
subclass of: SO_0000673
so part of: DIP2B
location: complement(join(150347..150599,151037..151160,151760..151937,152462..152536,153072..153129,153267..153328,153824..153994,154917..155085,155616..155746,156501..156610,157043..157154,157772..157893,158248..158371,158921..159001,159120..159229,159537..159738,160829..160943,161647..161774,161900..161980,162275..162411,162615..162754,163306..163420,163955..164074,164782..164875,165262..165326,166275..166377,167059..167168,167666..167789,168961..169071,169468..169559,169769..169966,170567..170686,170969..171112,175164..175289,176959..177102,181409..181480,207114..207195))
location: region:150347-207195:-1
so has part: feature:207114-207195:-1:exon
so has part: feature:181409-181480:-1:exon
so has part: feature:176959-177102:-1:exon
so has part: feature:175164-175289:-1:exon
so has part: feature:170969-171112:-1:exon
so has part: feature:170567-170686:-1:exon
so has part: feature:169769-169966:-1:exon
so has part: feature:169468-169559:-1:exon
so has part: feature:168961-169071:-1:exon
so has part: feature:167666-167789:-1:exon
so has part: feature:167059-167168:-1:exon
so has part: feature:166275-166377:-1:exon
so has part: feature:165262-165326:-1:exon
so has part: feature:164782-164875:-1:exon
so has part: feature:163955-164074:-1:exon
so has part: feature:163306-163420:-1:exon
so has part: feature:162615-162754:-1:exon
so has part: feature:162275-162411:-1:exon
so has part: feature:161900-161980:-1:exon
so has part: feature:161647-161774:-1:exon
so has part: feature:160829-160943:-1:exon
so has part: feature:159537-159738:-1:exon
so has part: feature:159120-159229:-1:exon
so has part: feature:158921-159001:-1:exon
so has part: feature:158248-158371:-1:exon
so has part: feature:157772-157893:-1:exon
so has part: feature:157043-157154:-1:exon
so has part: feature:156501-156610:-1:exon
so has part: feature:155616-155746:-1:exon
so has part: feature:154917-155085:-1:exon
so has part: feature:153824-153994:-1:exon
so has part: feature:153267-153328:-1:exon
so has part: feature:153072-153129:-1:exon
so has part: feature:152462-152536:-1:exon
so has part: feature:151760-151937:-1:exon
so has part: feature:151037-151160:-1:exon
so has part: feature:150347-150599:-1:exon

XP_039944290.1
type: Protein
SIO_000068: ncbiprotein

position:150347:-1
position: 150347
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:207195:-1
position: 207195
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:207114-207195:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:181409-181480:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:176959-177102:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:175164-175289:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:170969-171112:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:170567-170686:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:169769-169966:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:169468-169559:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:168961-169071:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:167666-167789:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:167059-167168:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:166275-166377:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:165262-165326:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:164782-164875:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:163955-164074:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:163306-163420:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:162615-162754:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:162275-162411:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:161900-161980:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:161647-161774:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:160829-160943:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:159537-159738:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:159120-159229:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:158921-159001:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:158248-158371:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:157772-157893:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:157043-157154:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:156501-156610:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:155616-155746:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:154917-155085:-1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:153824-153994:-1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:153267-153328:-1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:153072-153129:-1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:152462-152536:-1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:151760-151937:-1:exon

urn:…
SIO_000300: 36
SIO_000628: feature:151037-151160:-1:exon

urn:…
SIO_000300: 37
SIO_000628: feature:150347-150599:-1:exon

DIP2B
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 43150
gene: DIP2B
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: disco-interacting protein 2 homolog B isoform X2
translation: MAEPAAVSSLPREVREQLAELELELSEGDITQKGYEKKRAKLLAPYVPQTQGVDPALQKESRPQMPVPSAAPASASSSSSSSKFHRARSGGARDERYRSDIHTEAVQAALAKHKEQKMALPMPTKRRSTFVQSPADACTPPDTSSASEDEGSLRRQAALSAALHQSLQNAESWINRSVQGSSTSSSASSTLSHGEGKGTSGSLADVFANTRIESFSVPPDVTATTSTPSARPAAIDLPPSGIVKGMHKGSNRSSLMDTADGVPVSSRVSTKIQQLLNTLKRPKRPPLKEFFVDDFEEIVEVPQPDPNQPKPEGQQMTPVKGEPLGVVCNWPPALEAALQRWGTTQAKCPCLTALDVTGKPVYTLTYGKLWSRSLKLAYTLLNKLGTKNEPVLKPGDRVALVYPNNDPVMFMVAFYGCLLAEVIPVPIEDAGGQQIGFLLGSCGIALALTTEVCLKGLPKTQNGEIVQFKGWPRLKWVVTDSKYLSKSPKDWQPNISAAGTEPAYIEYKTSKEGSVMGVTVSRVAMLAHCQALSQACNYSEGETIVNVLDFKKDAGLWHGILTNVMNKLHTISVPYSVMKTCPLSWVQRVHAHKAKVALVKCRDLHWAMMAHRDQRDVSLSSLRMLIVTDGANPWSVSSCDAFLSLFQGHGLKPEAICPCATSPEAMTVAIRRPGVPGAPLPGRAILSMNGLSFGVIRVNTEDKNSALTVQDVGHVMPGGMMCIVKPDGPPQLCKTDEIGEICVSSRAGGMMYYGLAGVTKNTFEVIPVSSSGSPVGDVPFVRSGLLGFVGPGSLVFVVGKMDGLLTVSGRRHNADDIVATGLAVESIKTVYRGRIAVFSVSVFYDERIVVVAEQRPDASEEDSFQWMSRVLQAIDSIHQVGVYCLALVPANTLPKTPLGGIHISQTKQHFLEGSLHPCNILMCPHTCVTNLPKPRQKQPGVGPASVMVGNLVAGKRIAQASGRDLGQIEDNDLVKKHQFLTEVLQWRAQATPDHPLFLLLNAKGTTVCTATCLQLHKKAERIASVLCDKGHLNAGDNVVLLYPPGIELITAFYGCLYSGCVPVTVRPPHAQSLVATLPTVRMIVEVSKAACILTTQTLMRLLKSREAAGAVDVKTWPTIIDTDDLPRKRLAQIYKPPTPEMLAYLDFSVSTTGMLTGVKMSHAAVSGLCRAIKLQCELYSSRQIAICLDPYCGLGFVLWCLCSVYSGHQSILIPPMELESNLFLWLSTVSQYKIRDTFCSYSVMELCTKGLGNQVEMLKARGINLSCVRTCVVVAEERPRVSLTQSFSKLFKDIGLSSRAVSTTFGSRVNVAICLQGTSGPDPTTVYVDLKSLRHDRVRLVERGAPQSLLLSESGKILPGVKVVIVNPETKGPLGDSHLGEIWVNSPHTASGYYTIYDNETLQADHFNTRLSFGDAAQTLWARTGYLGFVRRTELTAASGERHDALYVVGALDETLELRGLRYHPIDIETSVSRTHRSIAECAVFTWTNLLVVVVELCGCEQEALDLVPLVTNVVLEEHYLIVGVVVVVDPGVIPINSRGEKQRMHLRDSFLADQLDPIYVAYNM
SIO_010081: DIP2B
subclass of: SO_0000673
so part of: DIP2B
location: complement(join(150347..150599,151037..151160,151760..151937,152462..152536,153072..153129,153267..153328,153824..153994,154917..155085,155616..155746,156501..156610,157043..157154,157772..157893,158248..158371,158921..159001,159120..159229,159537..159738,160829..160943,161647..161774,161900..161980,162275..162411,162615..162754,163306..163420,163955..164074,164782..164875,165262..165326,166275..166377,167059..167168,167666..167789,168979..169071,169468..169559,169769..169966,170567..170686,170969..171112,173351..173563,175164..175289,176959..177102,181409..181480,207114..207195))
location: region:150347-207195:-1
so has part: feature:207114-207195:-1:exon
so has part: feature:181409-181480:-1:exon
so has part: feature:176959-177102:-1:exon
so has part: feature:175164-175289:-1:exon
so has part: feature:173351-173563:-1:exon
so has part: feature:170969-171112:-1:exon
so has part: feature:170567-170686:-1:exon
so has part: feature:169769-169966:-1:exon
so has part: feature:169468-169559:-1:exon
so has part: feature:168979-169071:-1:exon
so has part: feature:167666-167789:-1:exon
so has part: feature:167059-167168:-1:exon
so has part: feature:166275-166377:-1:exon
so has part: feature:165262-165326:-1:exon
so has part: feature:164782-164875:-1:exon
so has part: feature:163955-164074:-1:exon
so has part: feature:163306-163420:-1:exon
so has part: feature:162615-162754:-1:exon
so has part: feature:162275-162411:-1:exon
so has part: feature:161900-161980:-1:exon
so has part: feature:161647-161774:-1:exon
so has part: feature:160829-160943:-1:exon
so has part: feature:159537-159738:-1:exon
so has part: feature:159120-159229:-1:exon
so has part: feature:158921-159001:-1:exon
so has part: feature:158248-158371:-1:exon
so has part: feature:157772-157893:-1:exon
so has part: feature:157043-157154:-1:exon
so has part: feature:156501-156610:-1:exon
so has part: feature:155616-155746:-1:exon
so has part: feature:154917-155085:-1:exon
so has part: feature:153824-153994:-1:exon
so has part: feature:153267-153328:-1:exon
so has part: feature:153072-153129:-1:exon
so has part: feature:152462-152536:-1:exon
so has part: feature:151760-151937:-1:exon
so has part: feature:151037-151160:-1:exon
so has part: feature:150347-150599:-1:exon

XP_039944289.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:207114-207195:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:181409-181480:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:176959-177102:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:175164-175289:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:173351-173563:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:170969-171112:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:170567-170686:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:169769-169966:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:169468-169559:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:168979-169071:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:167666-167789:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:167059-167168:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:166275-166377:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:165262-165326:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:164782-164875:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:163955-164074:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:163306-163420:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:162615-162754:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:162275-162411:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:161900-161980:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:161647-161774:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:160829-160943:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:159537-159738:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:159120-159229:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:158921-159001:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:158248-158371:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:157772-157893:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:157043-157154:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:156501-156610:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:155616-155746:-1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:154917-155085:-1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:153824-153994:-1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:153267-153328:-1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:153072-153129:-1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:152462-152536:-1:exon

urn:…
SIO_000300: 36
SIO_000628: feature:151760-151937:-1:exon

urn:…
SIO_000300: 37
SIO_000628: feature:151037-151160:-1:exon

urn:…
SIO_000300: 38
SIO_000628: feature:150347-150599:-1:exon

DIP2B
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 43150
gene: DIP2B
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: disco-interacting protein 2 homolog B isoform X1
translation: MAEPAAVSSLPREVREQLAELELELSEGDITQKGYEKKRAKLLAPYVPQTQGVDPALQKESRPQMPVPSAAPASASSSSSSSKFHRARSGGARDERYRSDIHTEAVQAALAKHKEQKMALPMPTKRRSTFVQSPADACTPPDTSSASEDEGSLRRQAALSAALHQSLQNAESWINRSVQGSSTSSSASSTLSHGEGKGTSGSLADVFANTRIESFSVPPDVTATTSTPSARPAAIDLPPSGIVKGMHKGSNRSSLMDTADGVPVSSRVSTKIQQLLNTLKRPKRPPLKEFFVDDFEEIVEVPQPDPNQPKPEGQQMTPVKGEPLGVVCNWPPALEAALQRWGTTQAKCPCLTALDVTGKPVYTLTYGKLWSRSLKLAYTLLNKLGTKNEPVLKPGDRVALVYPNNDPVMFMVAFYGCLLAEVIPVPIEVPLTRKDAGGQQIGFLLGSCGIALALTTEVCLKGLPKTQNGEIVQFKGWPRLKWVVTDSKYLSKSPKDWQPNISAAGTEPAYIEYKTSKEGSVMGVTVSRVAMLAHCQALSQACNYSEGETIVNVLDFKKDAGLWHGILTNVMNKLHTISVPYSVMKTCPLSWVQRVHAHKAKVALVKCRDLHWAMMAHRDQRDVSLSSLRMLIVTDGANPWSVSSCDAFLSLFQGHGLKPEAICPCATSPEAMTVAIRRPGVPGAPLPGRAILSMNGLSFGVIRVNTEDKNSALTVQDVGHVMPGGMMCIVKPDGPPQLCKTDEIGEICVSSRAGGMMYYGLAGVTKNTFEVIPVSSSGSPVGDVPFVRSGLLGFVGPGSLVFVVGKMDGLLTVSGRRHNADDIVATGLAVESIKTVYRGRIAVFSVSVFYDERIVVVAEQRPDASEEDSFQWMSRVLQAIDSIHQVGVYCLALVPANTLPKTPLGGIHISQTKQHFLEGSLHPCNILMCPHTCVTNLPKPRQKQPGVGPASVMVGNLVAGKRIAQASGRDLGQIEDNDLVKKHQFLTEVLQWRAQATPDHPLFLLLNAKGTTVCTATCLQLHKKAERIASVLCDKGHLNAGDNVVLLYPPGIELITAFYGCLYSGCVPVTVRPPHAQSLVATLPTVRMIVEVSKAACILTTQTLMRLLKSREAAGAVDVKTWPTIIDTDDLPRKRLAQIYKPPTPEMLAYLDFSVSTTGMLTGVKMSHAAVSGLCRAIKLQCELYSSRQIAICLDPYCGLGFVLWCLCSVYSGHQSILIPPMELESNLFLWLSTVSQYKIRDTFCSYSVMELCTKGLGNQVEMLKARGINLSCVRTCVVVAEERPRVSLTQSFSKLFKDIGLSSRAVSTTFGSRVNVAICLQGTSGPDPTTVYVDLKSLRHDRVRLVERGAPQSLLLSESGKILPGVKVVIVNPETKGPLGDSHLGEIWVNSPHTASGYYTIYDNETLQADHFNTRLSFGDAAQTLWARTGYLGFVRRTELTAASGERHDALYVVGALDETLELRGLRYHPIDIETSVSRTHRSIAECAVFTWTNLLVVVVELCGCEQEALDLVPLVTNVVLEEHYLIVGVVVVVDPGVIPINSRGEKQRMHLRDSFLADQLDPIYVAYNM
SIO_010081: DIP2B
subclass of: SO_0000673
so part of: DIP2B
location: complement(join(150347..150599,151037..151160,151760..151937,152462..152536,153072..153129,153267..153328,153824..153994,154917..155085,155616..155746,156501..156610,157043..157154,157772..157893,158248..158371,158921..159001,159120..159229,159537..159738,160829..160943,161647..161774,161900..161980,162275..162411,162615..162754,163306..163420,163955..164074,164782..164875,165262..165326,166275..166377,167059..167168,167666..167789,168961..169071,169468..169559,169769..169966,170567..170686,170969..171112,173351..173563,175164..175289,176959..177102,181409..181480,207114..207195))
location: region:150347-207195:-1
so has part: feature:207114-207195:-1:exon
so has part: feature:181409-181480:-1:exon
so has part: feature:176959-177102:-1:exon
so has part: feature:175164-175289:-1:exon
so has part: feature:173351-173563:-1:exon
so has part: feature:170969-171112:-1:exon
so has part: feature:170567-170686:-1:exon
so has part: feature:169769-169966:-1:exon
so has part: feature:169468-169559:-1:exon
so has part: feature:168961-169071:-1:exon
so has part: feature:167666-167789:-1:exon
so has part: feature:167059-167168:-1:exon
so has part: feature:166275-166377:-1:exon
so has part: feature:165262-165326:-1:exon
so has part: feature:164782-164875:-1:exon
so has part: feature:163955-164074:-1:exon
so has part: feature:163306-163420:-1:exon
so has part: feature:162615-162754:-1:exon
so has part: feature:162275-162411:-1:exon
so has part: feature:161900-161980:-1:exon
so has part: feature:161647-161774:-1:exon
so has part: feature:160829-160943:-1:exon
so has part: feature:159537-159738:-1:exon
so has part: feature:159120-159229:-1:exon
so has part: feature:158921-159001:-1:exon
so has part: feature:158248-158371:-1:exon
so has part: feature:157772-157893:-1:exon
so has part: feature:157043-157154:-1:exon
so has part: feature:156501-156610:-1:exon
so has part: feature:155616-155746:-1:exon
so has part: feature:154917-155085:-1:exon
so has part: feature:153824-153994:-1:exon
so has part: feature:153267-153328:-1:exon
so has part: feature:153072-153129:-1:exon
so has part: feature:152462-152536:-1:exon
so has part: feature:151760-151937:-1:exon
so has part: feature:151037-151160:-1:exon
so has part: feature:150347-150599:-1:exon

XP_039944288.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:207114-207195:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:181409-181480:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:176959-177102:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:175164-175289:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:173351-173563:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:170969-171112:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:170567-170686:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:169769-169966:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:169468-169559:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:168961-169071:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:167666-167789:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:167059-167168:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:166275-166377:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:165262-165326:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:164782-164875:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:163955-164074:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:163306-163420:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:162615-162754:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:162275-162411:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:161900-161980:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:161647-161774:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:160829-160943:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:159537-159738:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:159120-159229:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:158921-159001:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:158248-158371:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:157772-157893:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:157043-157154:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:156501-156610:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:155616-155746:-1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:154917-155085:-1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:153824-153994:-1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:153267-153328:-1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:153072-153129:-1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:152462-152536:-1:exon

urn:…
SIO_000300: 36
SIO_000628: feature:151760-151937:-1:exon

urn:…
SIO_000300: 37
SIO_000628: feature:151037-151160:-1:exon

urn:…
SIO_000300: 38
SIO_000628: feature:150347-150599:-1:exon

LARP4
type: Gene
subclass of: SO_0000704
RO_0002162: 43150
gene: LARP4
note: La ribonucleoprotein 4; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(208307..229051)
location: region:208307-229051:-1
so has part: feature:208307-229051:-1:exon
subclass of: SO_0000010

120764406
type: Gene
SIO_000068: ncbigene

position:208307:-1
position: 208307
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:229051:-1
position: 229051
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:208307-229051:-1:exon

LARP4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 43150
gene: LARP4
product: La ribonucleoprotein 4, transcript variant X3
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_040088365.1
SIO_010081: LARP4
subclass of: SO_0000673
so part of: LARP4
location: complement(join(208307..213389,213564..213732,214135..214256,214785..214943,215144..215192,215474..215698,218242..218345,218788..218997,219567..219620,219982..220092,221086..221189,221438..221574,222065..222140,222468..222626,223741..223885,228958..229051))
location: region:208307-229051:-1
so has part: feature:228958-229051:-1:exon
so has part: feature:223741-223885:-1:exon
so has part: feature:222468-222626:-1:exon
so has part: feature:222065-222140:-1:exon
so has part: feature:221438-221574:-1:exon
so has part: feature:221086-221189:-1:exon
so has part: feature:219982-220092:-1:exon
so has part: feature:219567-219620:-1:exon
so has part: feature:218788-218997:-1:exon
so has part: feature:218242-218345:-1:exon
so has part: feature:215474-215698:-1:exon
so has part: feature:215144-215192:-1:exon
so has part: feature:214785-214943:-1:exon
so has part: feature:214135-214256:-1:exon
so has part: feature:213564-213732:-1:exon
so has part: feature:208307-213389:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:228958-229051:-1:exon

position:228958:-1
position: 228958
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:223741-223885:-1:exon

position:223741:-1
position: 223741
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:223885:-1
position: 223885
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:222468-222626:-1:exon

position:222468:-1
position: 222468
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:222626:-1
position: 222626
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:222065-222140:-1:exon

position:222065:-1
position: 222065
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:222140:-1
position: 222140
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:221438-221574:-1:exon

position:221438:-1
position: 221438
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:221574:-1
position: 221574
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:221086-221189:-1:exon

position:221086:-1
position: 221086
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:221189:-1
position: 221189
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:219982-220092:-1:exon

position:219982:-1
position: 219982
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:220092:-1
position: 220092
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:219567-219620:-1:exon

position:219567:-1
position: 219567
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:219620:-1
position: 219620
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:218788-218997:-1:exon

position:218788:-1
position: 218788
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:218997:-1
position: 218997
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:218242-218345:-1:exon

position:218242:-1
position: 218242
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:218345:-1
position: 218345
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:215474-215698:-1:exon

position:215474:-1
position: 215474
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:215698:-1
position: 215698
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:215144-215192:-1:exon

position:215144:-1
position: 215144
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:215192:-1
position: 215192
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:214785-214943:-1:exon

position:214785:-1
position: 214785
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:214943:-1
position: 214943
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:214135-214256:-1:exon

position:214135:-1
position: 214135
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:214256:-1
position: 214256
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:213564-213732:-1:exon

position:213564:-1
position: 213564
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:213732:-1
position: 213732
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:208307-213389:-1:exon

position:213389:-1
position: 213389
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LARP4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 43150
gene: LARP4
product: La ribonucleoprotein 4, transcript variant X2
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_040088364.1
SIO_010081: LARP4
subclass of: SO_0000673
so part of: LARP4
location: complement(join(208307..213389,213564..213732,214135..214256,214785..214943,215144..215192,215474..215698,218242..218345,218788..218997,219567..219620,219982..220092,221086..221189,221438..221574,222065..222140,222468..222626,223741..223888,228958..229039))
location: region:208307-229039:-1
so has part: feature:228958-229039:-1:exon
so has part: feature:223741-223888:-1:exon
so has part: feature:222468-222626:-1:exon
so has part: feature:222065-222140:-1:exon
so has part: feature:221438-221574:-1:exon
so has part: feature:221086-221189:-1:exon
so has part: feature:219982-220092:-1:exon
so has part: feature:219567-219620:-1:exon
so has part: feature:218788-218997:-1:exon
so has part: feature:218242-218345:-1:exon
so has part: feature:215474-215698:-1:exon
so has part: feature:215144-215192:-1:exon
so has part: feature:214785-214943:-1:exon
so has part: feature:214135-214256:-1:exon
so has part: feature:213564-213732:-1:exon
so has part: feature:208307-213389:-1:exon

position:229039:-1
position: 229039
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:228958-229039:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:223741-223888:-1:exon

position:223888:-1
position: 223888
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:222468-222626:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:222065-222140:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:221438-221574:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:221086-221189:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:219982-220092:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:219567-219620:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:218788-218997:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:218242-218345:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:215474-215698:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:215144-215192:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:214785-214943:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:214135-214256:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:213564-213732:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:208307-213389:-1:exon

LARP4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 43150
gene: LARP4
product: La ribonucleoprotein 4, transcript variant X1
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_058423802.1
SIO_010081: LARP4
subclass of: SO_0000673
so part of: LARP4
location: complement(join(208307..213389,213564..213732,214135..214256,214785..214943,215144..215192,215474..215698,218242..218345,218788..218997,219567..219620,219982..220092,221086..221189,221438..221574,222065..222140,222468..222626,223741..223888,224092..224266))
location: region:208307-224266:-1
so has part: feature:224092-224266:-1:exon
so has part: feature:223741-223888:-1:exon
so has part: feature:222468-222626:-1:exon
so has part: feature:222065-222140:-1:exon
so has part: feature:221438-221574:-1:exon
so has part: feature:221086-221189:-1:exon
so has part: feature:219982-220092:-1:exon
so has part: feature:219567-219620:-1:exon
so has part: feature:218788-218997:-1:exon
so has part: feature:218242-218345:-1:exon
so has part: feature:215474-215698:-1:exon
so has part: feature:215144-215192:-1:exon
so has part: feature:214785-214943:-1:exon
so has part: feature:214135-214256:-1:exon
so has part: feature:213564-213732:-1:exon
so has part: feature:208307-213389:-1:exon

position:224266:-1
position: 224266
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:224092-224266:-1:exon

position:224092:-1
position: 224092
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:223741-223888:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:222468-222626:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:222065-222140:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:221438-221574:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:221086-221189:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:219982-220092:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:219567-219620:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:218788-218997:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:218242-218345:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:215474-215698:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:215144-215192:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:214785-214943:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:214135-214256:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:213564-213732:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:208307-213389:-1:exon

LARP4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 43150
gene: LARP4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: la-related protein 4 isoform X3
translation: MLLFVEVTSKGAGLNPNAKVWQEVPQGGGEAVPPTNGTEHTWQETAAAQGTPAEGNIEISEDSCKQYEVMYSPSCEATRNGTGVDEASANGIVLATEDLGYQIYEVSGDSSSTVSTEDIRECLRKQLEFCFSRENLSKDLYLMSQMDSDQFVPIWTIANMEGIKKLTTDMDLILEVLRSSPMVQVDERGEKVRPNHKRCIIILREIPETTPIEEVKALFKNENCPKVISCEFAHNNNWYVTFQSDTDAQQAFKYLREEVKTFQGKPVMARIKAINTFFAKNGYRVMDSSVYPQPVQTQAQFASPLFMQPVYSPQQYSIYSIVPQTWSPNPAPYFETPLAPFPNGGFVNGFNTPGSYKTNAASLSIGRPFHRNRVKPHFRSSSSSEHPEAPPGAGALPMGDLSRTSSRNFVMERHNSSLAGHQDQGYSQKDSPTAPLEQNGDYGVGRGRRNVFRGRRRREDDRVSRPQPSAETKTQTPKFDLLASNFPPLPGSTAKILGEPVLESRMSDIVKGVSKEKESKDSQSPCPAPAPDEQTPSAAQPPVPSVSSPSQAEPVVLSTIQPESKAEEVSAPKDVASPASPPASVSPVSAAKPPRTNTSSPCAQASAAPALSTQEPRKLSYAEVCQKPPKEPPPAPIQPLREQRTNIVPPAKSEENGTSEKAPERAPHDRAEGRMKDYSGFRGSGAPRGAAGKIREQRRQFGRRSSPQGAPRRVGKEQYVPPRSPK
SIO_010081: LARP4
subclass of: SO_0000673
so part of: LARP4
location: complement(join(213051..213389,213564..213732,214135..214256,214785..214943,215144..215192,215474..215698,218242..218345,218788..218997,219567..219620,219982..220092,221086..221189,221438..221574,222065..222140,222468..222626,223741..223885,228958..228975))
location: region:213051-228975:-1
so has part: feature:228958-228975:-1:exon
so has part: feature:223741-223885:-1:exon
so has part: feature:222468-222626:-1:exon
so has part: feature:222065-222140:-1:exon
so has part: feature:221438-221574:-1:exon
so has part: feature:221086-221189:-1:exon
so has part: feature:219982-220092:-1:exon
so has part: feature:219567-219620:-1:exon
so has part: feature:218788-218997:-1:exon
so has part: feature:218242-218345:-1:exon
so has part: feature:215474-215698:-1:exon
so has part: feature:215144-215192:-1:exon
so has part: feature:214785-214943:-1:exon
so has part: feature:214135-214256:-1:exon
so has part: feature:213564-213732:-1:exon
so has part: feature:213051-213389:-1:exon

XP_039944299.1
type: Protein
SIO_000068: ncbiprotein

position:213051:-1
position: 213051
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:228975:-1
position: 228975
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:228958-228975:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:223741-223885:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:222468-222626:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:222065-222140:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:221438-221574:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:221086-221189:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:219982-220092:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:219567-219620:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:218788-218997:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:218242-218345:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:215474-215698:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:215144-215192:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:214785-214943:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:214135-214256:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:213564-213732:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:213051-213389:-1:exon

LARP4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 43150
gene: LARP4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: la-related protein 4 isoform X2
translation: MLLFVEQVTSKGAGLNPNAKVWQEVPQGGGEAVPPTNGTEHTWQETAAAQGTPAEGNIEISEDSCKQYEVMYSPSCEATRNGTGVDEASANGIVLATEDLGYQIYEVSGDSSSTVSTEDIRECLRKQLEFCFSRENLSKDLYLMSQMDSDQFVPIWTIANMEGIKKLTTDMDLILEVLRSSPMVQVDERGEKVRPNHKRCIIILREIPETTPIEEVKALFKNENCPKVISCEFAHNNNWYVTFQSDTDAQQAFKYLREEVKTFQGKPVMARIKAINTFFAKNGYRVMDSSVYPQPVQTQAQFASPLFMQPVYSPQQYSIYSIVPQTWSPNPAPYFETPLAPFPNGGFVNGFNTPGSYKTNAASLSIGRPFHRNRVKPHFRSSSSSEHPEAPPGAGALPMGDLSRTSSRNFVMERHNSSLAGHQDQGYSQKDSPTAPLEQNGDYGVGRGRRNVFRGRRRREDDRVSRPQPSAETKTQTPKFDLLASNFPPLPGSTAKILGEPVLESRMSDIVKGVSKEKESKDSQSPCPAPAPDEQTPSAAQPPVPSVSSPSQAEPVVLSTIQPESKAEEVSAPKDVASPASPPASVSPVSAAKPPRTNTSSPCAQASAAPALSTQEPRKLSYAEVCQKPPKEPPPAPIQPLREQRTNIVPPAKSEENGTSEKAPERAPHDRAEGRMKDYSGFRGSGAPRGAAGKIREQRRQFGRRSSPQGAPRRVGKEQYVPPRSPK
SIO_010081: LARP4
subclass of: SO_0000673
so part of: LARP4
location: complement(join(213051..213389,213564..213732,214135..214256,214785..214943,215144..215192,215474..215698,218242..218345,218788..218997,219567..219620,219982..220092,221086..221189,221438..221574,222065..222140,222468..222626,223741..223888,228958..228975))
location: region:213051-228975:-1
so has part: feature:228958-228975:-1:exon
so has part: feature:223741-223888:-1:exon
so has part: feature:222468-222626:-1:exon
so has part: feature:222065-222140:-1:exon
so has part: feature:221438-221574:-1:exon
so has part: feature:221086-221189:-1:exon
so has part: feature:219982-220092:-1:exon
so has part: feature:219567-219620:-1:exon
so has part: feature:218788-218997:-1:exon
so has part: feature:218242-218345:-1:exon
so has part: feature:215474-215698:-1:exon
so has part: feature:215144-215192:-1:exon
so has part: feature:214785-214943:-1:exon
so has part: feature:214135-214256:-1:exon
so has part: feature:213564-213732:-1:exon
so has part: feature:213051-213389:-1:exon

XP_039944298.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:228958-228975:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:223741-223888:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:222468-222626:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:222065-222140:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:221438-221574:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:221086-221189:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:219982-220092:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:219567-219620:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:218788-218997:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:218242-218345:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:215474-215698:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:215144-215192:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:214785-214943:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:214135-214256:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:213564-213732:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:213051-213389:-1:exon

LARP4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 43150
gene: LARP4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: la-related protein 4 isoform X1
translation: MLSDVNKERLKATLLMEQVTSKGAGLNPNAKVWQEVPQGGGEAVPPTNGTEHTWQETAAAQGTPAEGNIEISEDSCKQYEVMYSPSCEATRNGTGVDEASANGIVLATEDLGYQIYEVSGDSSSTVSTEDIRECLRKQLEFCFSRENLSKDLYLMSQMDSDQFVPIWTIANMEGIKKLTTDMDLILEVLRSSPMVQVDERGEKVRPNHKRCIIILREIPETTPIEEVKALFKNENCPKVISCEFAHNNNWYVTFQSDTDAQQAFKYLREEVKTFQGKPVMARIKAINTFFAKNGYRVMDSSVYPQPVQTQAQFASPLFMQPVYSPQQYSIYSIVPQTWSPNPAPYFETPLAPFPNGGFVNGFNTPGSYKTNAASLSIGRPFHRNRVKPHFRSSSSSEHPEAPPGAGALPMGDLSRTSSRNFVMERHNSSLAGHQDQGYSQKDSPTAPLEQNGDYGVGRGRRNVFRGRRRREDDRVSRPQPSAETKTQTPKFDLLASNFPPLPGSTAKILGEPVLESRMSDIVKGVSKEKESKDSQSPCPAPAPDEQTPSAAQPPVPSVSSPSQAEPVVLSTIQPESKAEEVSAPKDVASPASPPASVSPVSAAKPPRTNTSSPCAQASAAPALSTQEPRKLSYAEVCQKPPKEPPPAPIQPLREQRTNIVPPAKSEENGTSEKAPERAPHDRAEGRMKDYSGFRGSGAPRGAAGKIREQRRQFGRRSSPQGAPRRVGKEQYVPPRSPK
SIO_010081: LARP4
subclass of: SO_0000673
so part of: LARP4
location: complement(join(213051..213389,213564..213732,214135..214256,214785..214943,215144..215192,215474..215698,218242..218345,218788..218997,219567..219620,219982..220092,221086..221189,221438..221574,222065..222140,222468..222626,223741..223888,224092..224142))
location: region:213051-224142:-1
so has part: feature:224092-224142:-1:exon
so has part: feature:223741-223888:-1:exon
so has part: feature:222468-222626:-1:exon
so has part: feature:222065-222140:-1:exon
so has part: feature:221438-221574:-1:exon
so has part: feature:221086-221189:-1:exon
so has part: feature:219982-220092:-1:exon
so has part: feature:219567-219620:-1:exon
so has part: feature:218788-218997:-1:exon
so has part: feature:218242-218345:-1:exon
so has part: feature:215474-215698:-1:exon
so has part: feature:215144-215192:-1:exon
so has part: feature:214785-214943:-1:exon
so has part: feature:214135-214256:-1:exon
so has part: feature:213564-213732:-1:exon
so has part: feature:213051-213389:-1:exon

XP_058279785.1
type: Protein
SIO_000068: ncbiprotein

position:224142:-1
position: 224142
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:224092-224142:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:223741-223888:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:222468-222626:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:222065-222140:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:221438-221574:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:221086-221189:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:219982-220092:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:219567-219620:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:218788-218997:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:218242-218345:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:215474-215698:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:215144-215192:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:214785-214943:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:214135-214256:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:213564-213732:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:213051-213389:-1:exon

LIMA1
type: Gene
subclass of: SO_0000704
RO_0002162: 43150
gene: LIMA1
note: LIM domain and actin binding 1; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 238044..263411
location: region:238044-263411:1
so has part: feature:238044-263411:1:exon
subclass of: SO_0000010

120764426
type: Gene
SIO_000068: ncbigene

position:238044:1
position: 238044
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:263411:1
position: 263411
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:238044-263411:1:exon

LIMA1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 43150
gene: LIMA1
product: LIM domain and actin binding 1, transcript variant X3
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_040088395.2
SIO_010081: LIMA1
subclass of: SO_0000673
so part of: LIMA1
location: join(238044..238175,241376..241511,243416..243461,247528..247926,251825..251933,252926..253086,255321..255425,257408..257465,257733..257845,260741..260874,261244..263411)
location: region:238044-263411:1
so has part: feature:238044-238175:1:exon
so has part: feature:241376-241511:1:exon
so has part: feature:243416-243461:1:exon
so has part: feature:247528-247926:1:exon
so has part: feature:251825-251933:1:exon
so has part: feature:252926-253086:1:exon
so has part: feature:255321-255425:1:exon
so has part: feature:257408-257465:1:exon
so has part: feature:257733-257845:1:exon
so has part: feature:260741-260874:1:exon
so has part: feature:261244-263411:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:238044-238175:1:exon

position:238175:1
position: 238175
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:241376-241511:1:exon

position:241376:1
position: 241376
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:241511:1
position: 241511
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:243416-243461:1:exon

position:243416:1
position: 243416
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:243461:1
position: 243461
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:247528-247926:1:exon

position:247528:1
position: 247528
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:247926:1
position: 247926
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:251825-251933:1:exon

position:251825:1
position: 251825
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:251933:1
position: 251933
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:252926-253086:1:exon

position:252926:1
position: 252926
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:253086:1
position: 253086
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:255321-255425:1:exon

position:255321:1
position: 255321
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:255425:1
position: 255425
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:257408-257465:1:exon

position:257408:1
position: 257408
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:257465:1
position: 257465
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:257733-257845:1:exon

position:257733:1
position: 257733
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:257845:1
position: 257845
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:260741-260874:1:exon

position:260741:1
position: 260741
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:260874:1
position: 260874
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:261244-263411:1:exon

position:261244:1
position: 261244
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LIMA1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 43150
gene: LIMA1
product: LIM domain and actin binding 1, transcript variant X2
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_040088393.2
SIO_010081: LIMA1
subclass of: SO_0000673
so part of: LIMA1
location: join(238052..238109,241376..241511,243416..243461,247528..247926,251822..251933,252926..253086,255321..255425,257408..257465,257733..257845,260741..260874,261244..263411)
location: region:238052-263411:1
so has part: feature:238052-238109:1:exon
so has part: feature:241376-241511:1:exon
so has part: feature:243416-243461:1:exon
so has part: feature:247528-247926:1:exon
so has part: feature:251822-251933:1:exon
so has part: feature:252926-253086:1:exon
so has part: feature:255321-255425:1:exon
so has part: feature:257408-257465:1:exon
so has part: feature:257733-257845:1:exon
so has part: feature:260741-260874:1:exon
so has part: feature:261244-263411:1:exon

position:238052:1
position: 238052
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:238052-238109:1:exon

position:238109:1
position: 238109
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:241376-241511:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:243416-243461:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:247528-247926:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:251822-251933:1:exon

position:251822:1
position: 251822
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:252926-253086:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:255321-255425:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:257408-257465:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:257733-257845:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:260741-260874:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:261244-263411:1:exon

LIMA1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 43150
gene: LIMA1
product: LIM domain and actin binding 1, transcript variant X5
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_040088397.1
SIO_010081: LIMA1
subclass of: SO_0000673
so part of: LIMA1
location: join(238057..238175,241376..241511,243416..243461,247528..247926,251825..251933,252926..253086,257408..257465,257733..257845,260741..260874,261244..263411)
location: region:238057-263411:1
so has part: feature:238057-238175:1:exon
so has part: feature:241376-241511:1:exon
so has part: feature:243416-243461:1:exon
so has part: feature:247528-247926:1:exon
so has part: feature:251825-251933:1:exon
so has part: feature:252926-253086:1:exon
so has part: feature:257408-257465:1:exon
so has part: feature:257733-257845:1:exon
so has part: feature:260741-260874:1:exon
so has part: feature:261244-263411:1:exon

position:238057:1
position: 238057
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:238057-238175:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:241376-241511:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:243416-243461:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:247528-247926:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:251825-251933:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:252926-253086:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:257408-257465:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:257733-257845:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:260741-260874:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:261244-263411:1:exon

LIMA1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 43150
gene: LIMA1
product: LIM domain and actin binding 1, transcript variant X1
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_040088392.1
SIO_010081: LIMA1
subclass of: SO_0000673
so part of: LIMA1
location: join(238059..238175,241376..241511,243416..243461,247528..247926,251822..251933,252926..253086,255321..255425,257408..257465,257733..257845,260741..260874,261244..263411)
location: region:238059-263411:1
so has part: feature:238059-238175:1:exon
so has part: feature:241376-241511:1:exon
so has part: feature:243416-243461:1:exon
so has part: feature:247528-247926:1:exon
so has part: feature:251822-251933:1:exon
so has part: feature:252926-253086:1:exon
so has part: feature:255321-255425:1:exon
so has part: feature:257408-257465:1:exon
so has part: feature:257733-257845:1:exon
so has part: feature:260741-260874:1:exon
so has part: feature:261244-263411:1:exon

position:238059:1
position: 238059
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:238059-238175:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:241376-241511:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:243416-243461:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:247528-247926:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:251822-251933:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:252926-253086:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:255321-255425:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:257408-257465:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:257733-257845:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:260741-260874:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:261244-263411:1:exon

LIMA1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 43150
gene: LIMA1
product: LIM domain and actin binding 1, transcript variant X4
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_040088396.1
SIO_010081: LIMA1
subclass of: SO_0000673
so part of: LIMA1
location: join(238059..238175,241376..241511,243416..243461,247528..247926,251822..251933,252926..253086,257408..257465,257733..257845,260741..260874,261244..263411)
location: region:238059-263411:1
so has part: feature:238059-238175:1:exon
so has part: feature:241376-241511:1:exon
so has part: feature:243416-243461:1:exon
so has part: feature:247528-247926:1:exon
so has part: feature:251822-251933:1:exon
so has part: feature:252926-253086:1:exon
so has part: feature:257408-257465:1:exon
so has part: feature:257733-257845:1:exon
so has part: feature:260741-260874:1:exon
so has part: feature:261244-263411:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:238059-238175:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:241376-241511:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:243416-243461:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:247528-247926:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:251822-251933:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:252926-253086:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:257408-257465:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:257733-257845:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:260741-260874:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:261244-263411:1:exon

LIMA1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 43150
gene: LIMA1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LIM domain and actin-binding protein 1 isoform X1
translation: MEPSPFNRRQWTSQSLKITAKELSLVNKNKSSALAERFSKYQKAAEEAAAEKKRSNTETLPAHFTRGNLSVLKKKWENPVLGAESGKETVRSSCAEVRHKVGTGRAPSPSPGAGAASGQQQCPAGDSTEPRSRCRESGSMENCVREPRGMEKPEASERSESPGRIEKYNVPLTKLKMMFEKGEAPQPKQGPREPRRAAVGRRISDNSLSLEDCDAAQGERSHGTAGYLVETSPGLSPDKTETRKNLDMPRLSETSIKDRLAKYQAAVSKQGSSSGISPMSEIQASESELQNYKSGQKENMAPVEDSSSCQDGEKVSVGENSLSLHSGLLEDGHAGQSESEAEAQKPVGSKQQNLGAKAAGQTEASPPKAVKKFQLPMKETCVGCQKTVYPMERLFANQQVFHISCFRCSYCNSKLSLGTYASLRGNIYCKPHFNQLFKSKGNYDEGFGHKQHKELWAGKTECEESLEKTVHGVNAPETPQSPGVEDAPIAKVGVLAASMEAKASAVPEREERPAETKKLRIAWPPPSDQSIHGSALDEGIKVLKPKWPPEEEISKPDVQEDVDLDLKKLRRSSSLKERSRPFTVAASFRTVSVKGHKRDSSPPPSKEERDTLKRSEELEREVVVEKKQKEKKVERRNIQNAGEKNMEEERELSGTKTVEHNVVENGQMNADTDEEEHTMEEPEIPKEELEPNSPKHSSLANVVTTKDSSPNQNYKSQDVGFWEGEDMEDLSVEEQIKRNRYYDDDDE
SIO_010081: LIMA1
subclass of: SO_0000673
so part of: LIMA1
location: join(241393..241511,243416..243461,247528..247926,251822..251933,252926..253086,255321..255425,257408..257465,257733..257845,260741..260874,261244..262240)
location: region:241393-262240:1
so has part: feature:241393-241511:1:exon
so has part: feature:243416-243461:1:exon
so has part: feature:247528-247926:1:exon
so has part: feature:251822-251933:1:exon
so has part: feature:252926-253086:1:exon
so has part: feature:255321-255425:1:exon
so has part: feature:257408-257465:1:exon
so has part: feature:257733-257845:1:exon
so has part: feature:260741-260874:1:exon
so has part: feature:261244-262240:1:exon

XP_039944326.1
type: Protein
SIO_000068: ncbiprotein

position:241393:1
position: 241393
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:262240:1
position: 262240
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:241393-241511:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:243416-243461:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:247528-247926:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:251822-251933:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:252926-253086:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:255321-255425:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:257408-257465:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:257733-257845:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:260741-260874:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:261244-262240:1:exon

LIMA1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 43150
gene: LIMA1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LIM domain and actin-binding protein 1 isoform X1
translation: MEPSPFNRRQWTSQSLKITAKELSLVNKNKSSALAERFSKYQKAAEEAAAEKKRSNTETLPAHFTRGNLSVLKKKWENPVLGAESGKETVRSSCAEVRHKVGTGRAPSPSPGAGAASGQQQCPAGDSTEPRSRCRESGSMENCVREPRGMEKPEASERSESPGRIEKYNVPLTKLKMMFEKGEAPQPKQGPREPRRAAVGRRISDNSLSLEDCDAAQGERSHGTAGYLVETSPGLSPDKTETRKNLDMPRLSETSIKDRLAKYQAAVSKQGSSSGISPMSEIQASESELQNYKSGQKENMAPVEDSSSCQDGEKVSVGENSLSLHSGLLEDGHAGQSESEAEAQKPVGSKQQNLGAKAAGQTEASPPKAVKKFQLPMKETCVGCQKTVYPMERLFANQQVFHISCFRCSYCNSKLSLGTYASLRGNIYCKPHFNQLFKSKGNYDEGFGHKQHKELWAGKTECEESLEKTVHGVNAPETPQSPGVEDAPIAKVGVLAASMEAKASAVPEREERPAETKKLRIAWPPPSDQSIHGSALDEGIKVLKPKWPPEEEISKPDVQEDVDLDLKKLRRSSSLKERSRPFTVAASFRTVSVKGHKRDSSPPPSKEERDTLKRSEELEREVVVEKKQKEKKVERRNIQNAGEKNMEEERELSGTKTVEHNVVENGQMNADTDEEEHTMEEPEIPKEELEPNSPKHSSLANVVTTKDSSPNQNYKSQDVGFWEGEDMEDLSVEEQIKRNRYYDDDDE
SIO_010081: LIMA1
subclass of: SO_0000673
so part of: LIMA1
location: join(241393..241511,243416..243461,247528..247926,251822..251933,252926..253086,255321..255425,257408..257465,257733..257845,260741..260874,261244..262240)
location: region:241393-262240:1
so has part: feature:241393-241511:1:exon
so has part: feature:243416-243461:1:exon
so has part: feature:247528-247926:1:exon
so has part: feature:251822-251933:1:exon
so has part: feature:252926-253086:1:exon
so has part: feature:255321-255425:1:exon
so has part: feature:257408-257465:1:exon
so has part: feature:257733-257845:1:exon
so has part: feature:260741-260874:1:exon
so has part: feature:261244-262240:1:exon

XP_039944327.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:241393-241511:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:243416-243461:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:247528-247926:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:251822-251933:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:252926-253086:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:255321-255425:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:257408-257465:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:257733-257845:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:260741-260874:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:261244-262240:1:exon

LIMA1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 43150
gene: LIMA1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LIM domain and actin-binding protein 1 isoform X3
translation: MEPSPFNRRQWTSQSLKITAKELSLVNKNKSSALAERFSKYQKAAEEAAAEKKRSNTETLPAHFTRGNLSVLKKKWENPVLGAESGKETVRSSCAEVRHKVGTGRAPSPSPGAGAASGQQQCPAGDSTEPRSRCRESGSMENCVREPRGMEKPEASERSESPGRIEKYNVPLTKLKMMFEKGEAPQPKQGPREPRRAAVGRRISDNSLSLEDCDAAQGERSHGTAGYLVETSPGLSPDKTETRKNLDMPRLSETSIKDRLAKYQAAVSKQGSSSGISPMVSVGENSLSLHSGLLEDGHAGQSESEAEAQKPVGSKQQNLGAKAAGQTEASPPKAVKKFQLPMKETCVGCQKTVYPMERLFANQQVFHISCFRCSYCNSKLSLGTYASLRGNIYCKPHFNQLFKSKGNYDEGFGHKQHKELWAGKTECEESLEKTVHGVNAPETPQSPGVEDAPIAKVGVLAASMEAKASAVPEREERPAETKKLRIAWPPPSDQSIHGSALDEGIKVLKPKWPPEEEISKPDVQEDVDLDLKKLRRSSSLKERSRPFTVAASFRTVSVKGHKRDSSPPPSKEERDTLKRSEELEREVVVEKKQKEKKVERRNIQNAGEKNMEEERELSGTKTVEHNVVENGQMNADTDEEEHTMEEPEIPKEELEPNSPKHSSLANVVTTKDSSPNQNYKSQDVGFWEGEDMEDLSVEEQIKRNRYYDDDDE
SIO_010081: LIMA1
subclass of: SO_0000673
so part of: LIMA1
location: join(241393..241511,243416..243461,247528..247926,251822..251933,252926..253086,257408..257465,257733..257845,260741..260874,261244..262240)
location: region:241393-262240:1
so has part: feature:241393-241511:1:exon
so has part: feature:243416-243461:1:exon
so has part: feature:247528-247926:1:exon
so has part: feature:251822-251933:1:exon
so has part: feature:252926-253086:1:exon
so has part: feature:257408-257465:1:exon
so has part: feature:257733-257845:1:exon
so has part: feature:260741-260874:1:exon
so has part: feature:261244-262240:1:exon

XP_039944330.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:241393-241511:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:243416-243461:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:247528-247926:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:251822-251933:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:252926-253086:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:257408-257465:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:257733-257845:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:260741-260874:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:261244-262240:1:exon

LIMA1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 43150
gene: LIMA1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LIM domain and actin-binding protein 1 isoform X2
translation: MEPSPFNRRQWTSQSLKITAKELSLVNKNKSSALAERFSKYQKAAEEAAAEKKRSNTETLPAHFTRGNLSVLKKKWENPVLGAESGKETVRSSCAEVRHKVGTGRAPSPSPGAGAASGQQQCPAGDSTEPRSRCRESGSMENCVREPRGMEKPEASERSESPGRIEKYNVPLTKLKMMFEKGEAPQPKGPREPRRAAVGRRISDNSLSLEDCDAAQGERSHGTAGYLVETSPGLSPDKTETRKNLDMPRLSETSIKDRLAKYQAAVSKQGSSSGISPMSEIQASESELQNYKSGQKENMAPVEDSSSCQDGEKVSVGENSLSLHSGLLEDGHAGQSESEAEAQKPVGSKQQNLGAKAAGQTEASPPKAVKKFQLPMKETCVGCQKTVYPMERLFANQQVFHISCFRCSYCNSKLSLGTYASLRGNIYCKPHFNQLFKSKGNYDEGFGHKQHKELWAGKTECEESLEKTVHGVNAPETPQSPGVEDAPIAKVGVLAASMEAKASAVPEREERPAETKKLRIAWPPPSDQSIHGSALDEGIKVLKPKWPPEEEISKPDVQEDVDLDLKKLRRSSSLKERSRPFTVAASFRTVSVKGHKRDSSPPPSKEERDTLKRSEELEREVVVEKKQKEKKVERRNIQNAGEKNMEEERELSGTKTVEHNVVENGQMNADTDEEEHTMEEPEIPKEELEPNSPKHSSLANVVTTKDSSPNQNYKSQDVGFWEGEDMEDLSVEEQIKRNRYYDDDDE
SIO_010081: LIMA1
subclass of: SO_0000673
so part of: LIMA1
location: join(241393..241511,243416..243461,247528..247926,251825..251933,252926..253086,255321..255425,257408..257465,257733..257845,260741..260874,261244..262240)
location: region:241393-262240:1
so has part: feature:241393-241511:1:exon
so has part: feature:243416-243461:1:exon
so has part: feature:247528-247926:1:exon
so has part: feature:251825-251933:1:exon
so has part: feature:252926-253086:1:exon
so has part: feature:255321-255425:1:exon
so has part: feature:257408-257465:1:exon
so has part: feature:257733-257845:1:exon
so has part: feature:260741-260874:1:exon
so has part: feature:261244-262240:1:exon

XP_039944329.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:241393-241511:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:243416-243461:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:247528-247926:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:251825-251933:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:252926-253086:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:255321-255425:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:257408-257465:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:257733-257845:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:260741-260874:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:261244-262240:1:exon

LIMA1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 43150
gene: LIMA1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LIM domain and actin-binding protein 1 isoform X4
translation: MEPSPFNRRQWTSQSLKITAKELSLVNKNKSSALAERFSKYQKAAEEAAAEKKRSNTETLPAHFTRGNLSVLKKKWENPVLGAESGKETVRSSCAEVRHKVGTGRAPSPSPGAGAASGQQQCPAGDSTEPRSRCRESGSMENCVREPRGMEKPEASERSESPGRIEKYNVPLTKLKMMFEKGEAPQPKGPREPRRAAVGRRISDNSLSLEDCDAAQGERSHGTAGYLVETSPGLSPDKTETRKNLDMPRLSETSIKDRLAKYQAAVSKQGSSSGISPMVSVGENSLSLHSGLLEDGHAGQSESEAEAQKPVGSKQQNLGAKAAGQTEASPPKAVKKFQLPMKETCVGCQKTVYPMERLFANQQVFHISCFRCSYCNSKLSLGTYASLRGNIYCKPHFNQLFKSKGNYDEGFGHKQHKELWAGKTECEESLEKTVHGVNAPETPQSPGVEDAPIAKVGVLAASMEAKASAVPEREERPAETKKLRIAWPPPSDQSIHGSALDEGIKVLKPKWPPEEEISKPDVQEDVDLDLKKLRRSSSLKERSRPFTVAASFRTVSVKGHKRDSSPPPSKEERDTLKRSEELEREVVVEKKQKEKKVERRNIQNAGEKNMEEERELSGTKTVEHNVVENGQMNADTDEEEHTMEEPEIPKEELEPNSPKHSSLANVVTTKDSSPNQNYKSQDVGFWEGEDMEDLSVEEQIKRNRYYDDDDE
SIO_010081: LIMA1
subclass of: SO_0000673
so part of: LIMA1
location: join(241393..241511,243416..243461,247528..247926,251825..251933,252926..253086,257408..257465,257733..257845,260741..260874,261244..262240)
location: region:241393-262240:1
so has part: feature:241393-241511:1:exon
so has part: feature:243416-243461:1:exon
so has part: feature:247528-247926:1:exon
so has part: feature:251825-251933:1:exon
so has part: feature:252926-253086:1:exon
so has part: feature:257408-257465:1:exon
so has part: feature:257733-257845:1:exon
so has part: feature:260741-260874:1:exon
so has part: feature:261244-262240:1:exon

XP_039944331.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:241393-241511:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:243416-243461:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:247528-247926:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:251825-251933:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:252926-253086:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:257408-257465:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:257733-257845:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:260741-260874:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:261244-262240:1:exon

CERS5
type: Gene
subclass of: SO_0000704
RO_0002162: 43150
gene: CERS5
note: ceramide synthase 5; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 266003..285675
location: region:266003-285675:1
so has part: feature:266003-285675:1:exon
subclass of: SO_0000010

120764411
type: Gene
SIO_000068: ncbigene

position:266003:1
position: 266003
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:285675:1
position: 285675
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:266003-285675:1:exon

CERS5
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 43150
gene: CERS5
product: ceramide synthase 5, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins
transcript id: XM_040088374.2
SIO_010081: CERS5
subclass of: SO_0000673
so part of: CERS5
location: join(266003..266217,271276..271381,273369..273499,275115..275172,275703..275753,276297..276389,277675..277803,278398..278504,280754..280910,281396..281425,285355..285675)
location: region:266003-285675:1
so has part: feature:266003-266217:1:exon
so has part: feature:271276-271381:1:exon
so has part: feature:273369-273499:1:exon
so has part: feature:275115-275172:1:exon
so has part: feature:275703-275753:1:exon
so has part: feature:276297-276389:1:exon
so has part: feature:277675-277803:1:exon
so has part: feature:278398-278504:1:exon
so has part: feature:280754-280910:1:exon
so has part: feature:281396-281425:1:exon
so has part: feature:285355-285675:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:266003-266217:1:exon

position:266217:1
position: 266217
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:271276-271381:1:exon

position:271276:1
position: 271276
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:271381:1
position: 271381
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:273369-273499:1:exon

position:273369:1
position: 273369
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:273499:1
position: 273499
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:275115-275172:1:exon

position:275115:1
position: 275115
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:275172:1
position: 275172
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:275703-275753:1:exon

position:275703:1
position: 275703
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:275753:1
position: 275753
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:276297-276389:1:exon

position:276297:1
position: 276297
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:276389:1
position: 276389
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:277675-277803:1:exon

position:277675:1
position: 277675
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:277803:1
position: 277803
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:278398-278504:1:exon

position:278398:1
position: 278398
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:278504:1
position: 278504
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:280754-280910:1:exon

position:280754:1
position: 280754
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:280910:1
position: 280910
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:281396-281425:1:exon

position:281396:1
position: 281396
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:281425:1
position: 281425
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:285355-285675:1:exon

position:285355:1
position: 285355
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

CERS5
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 43150
gene: CERS5
product: ceramide synthase 5, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins
transcript id: XM_040088375.2
SIO_010081: CERS5
subclass of: SO_0000673
so part of: CERS5
location: join(266003..266217,271276..271381,273369..273499,275115..275172,275703..275753,276297..276389,277675..277803,278398..278504,280754..280910,285355..285672)
location: region:266003-285672:1
so has part: feature:266003-266217:1:exon
so has part: feature:271276-271381:1:exon
so has part: feature:273369-273499:1:exon
so has part: feature:275115-275172:1:exon
so has part: feature:275703-275753:1:exon
so has part: feature:276297-276389:1:exon
so has part: feature:277675-277803:1:exon
so has part: feature:278398-278504:1:exon
so has part: feature:280754-280910:1:exon
so has part: feature:285355-285672:1:exon

position:285672:1
position: 285672
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:266003-266217:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:271276-271381:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:273369-273499:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:275115-275172:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:275703-275753:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:276297-276389:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:277675-277803:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:278398-278504:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:280754-280910:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:285355-285672:1:exon

CERS5
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 43150
gene: CERS5
product: ceramide synthase 5, transcript variant X1
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_040088373.2
SIO_010081: CERS5
subclass of: SO_0000673
so part of: CERS5
location: join(266003..266217,271276..271381,273369..273499,275115..275172,275703..275753,276297..276389,277675..277803,278398..278504,280754..280910,283024..284234)
location: region:266003-284234:1
so has part: feature:266003-266217:1:exon
so has part: feature:271276-271381:1:exon
so has part: feature:273369-273499:1:exon
so has part: feature:275115-275172:1:exon
so has part: feature:275703-275753:1:exon
so has part: feature:276297-276389:1:exon
so has part: feature:277675-277803:1:exon
so has part: feature:278398-278504:1:exon
so has part: feature:280754-280910:1:exon
so has part: feature:283024-284234:1:exon

position:284234:1
position: 284234
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:266003-266217:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:271276-271381:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:273369-273499:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:275115-275172:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:275703-275753:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:276297-276389:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:277675-277803:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:278398-278504:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:280754-280910:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:283024-284234:1:exon

position:283024:1
position: 283024
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

CERS5
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 43150
gene: CERS5
product: ceramide synthase 5, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins
transcript id: XM_058423817.1
SIO_010081: CERS5
subclass of: SO_0000673
so part of: CERS5
location: join(266003..266217,271276..271381,273369..273499,275115..275172,275703..275753,276297..276389,277675..277803,278398..278504,280754..280910,281396..283014)
location: region:266003-283014:1
so has part: feature:266003-266217:1:exon
so has part: feature:271276-271381:1:exon
so has part: feature:273369-273499:1:exon
so has part: feature:275115-275172:1:exon
so has part: feature:275703-275753:1:exon
so has part: feature:276297-276389:1:exon
so has part: feature:277675-277803:1:exon
so has part: feature:278398-278504:1:exon
so has part: feature:280754-280910:1:exon
so has part: feature:281396-283014:1:exon

position:283014:1
position: 283014
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:266003-266217:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:271276-271381:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:273369-273499:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:275115-275172:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:275703-275753:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:276297-276389:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:277675-277803:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:278398-278504:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:280754-280910:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:281396-283014:1:exon

CERS5
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 43150
gene: CERS5
product: ceramide synthase 5, transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins
transcript id: XM_058423818.1
SIO_010081: CERS5
subclass of: SO_0000673
so part of: CERS5
location: join(266003..266217,271276..271381,273369..273499,275115..275172,275703..275753,276297..276389,277675..277803,278398..278504,280754..280910,281328..281420)
location: region:266003-281420:1
so has part: feature:266003-266217:1:exon
so has part: feature:271276-271381:1:exon
so has part: feature:273369-273499:1:exon
so has part: feature:275115-275172:1:exon
so has part: feature:275703-275753:1:exon
so has part: feature:276297-276389:1:exon
so has part: feature:277675-277803:1:exon
so has part: feature:278398-278504:1:exon
so has part: feature:280754-280910:1:exon
so has part: feature:281328-281420:1:exon

position:281420:1
position: 281420
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:266003-266217:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:271276-271381:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:273369-273499:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:275115-275172:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:275703-275753:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:276297-276389:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:277675-277803:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:278398-278504:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:280754-280910:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:281328-281420:1:exon

position:281328:1
position: 281328
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

CERS5
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 43150
gene: CERS5
product: ceramide synthase 5, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins
transcript id: XM_040088376.2
SIO_010081: CERS5
subclass of: SO_0000673
so part of: CERS5
location: join(266003..266217,271276..271381,273369..273499,275115..275172,275703..275753,276297..276389,277675..277803,278398..278504,280754..280910,281131..281303)
location: region:266003-281303:1
so has part: feature:266003-266217:1:exon
so has part: feature:271276-271381:1:exon
so has part: feature:273369-273499:1:exon
so has part: feature:275115-275172:1:exon
so has part: feature:275703-275753:1:exon
so has part: feature:276297-276389:1:exon
so has part: feature:277675-277803:1:exon
so has part: feature:278398-278504:1:exon
so has part: feature:280754-280910:1:exon
so has part: feature:281131-281303:1:exon

position:281303:1
position: 281303
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:266003-266217:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:271276-271381:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:273369-273499:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:275115-275172:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:275703-275753:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:276297-276389:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:277675-277803:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:278398-278504:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:280754-280910:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:281131-281303:1:exon

position:281131:1
position: 281131
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

CERS5
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 43150
gene: CERS5
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ceramide synthase 5 isoform X3
translation: MAAAAAAALRAWFWNERFWLPHNVTWADLAGEPGPPGSGLQYPRAAHVLSAFPLALGIFAVRLLFERFIAKPCAIKLGIQDSGPHRAQPNAILEKVFTSITKSPDGKRLEGLSKQLDWDVRKIQRWFRHRRNQDKPTTLTKFCESMWRFTFYLSIFFYGIRFLWTAPWFWDTRQCWYNYPFQPLTSRLYYYYILELAFYWSLMFSQFTDIKRKDFLIMFVHHLATIGLITFSYMNNMVRVGTLVLCLHDASDFLLEAAKLANYAKYQRLCDAFFMLFGVVFIVTRLGIYPFWILNTTLFESWELIGPYPSWWLFNGLLVTLQVLHVIWSYLIIRTASKALVRGKIGAGQFHPVHPMEVLLNGSTAFGWISHCPAFPITTRSFHPRR
SIO_010081: CERS5
subclass of: SO_0000673
so part of: CERS5
location: join(266018..266217,271276..271381,273369..273499,275115..275172,275703..275753,276297..276389,277675..277803,278398..278504,280754..280910,281396..281425,285355..285453)
location: region:266018-285453:1
so has part: feature:266018-266217:1:exon
so has part: feature:271276-271381:1:exon
so has part: feature:273369-273499:1:exon
so has part: feature:275115-275172:1:exon
so has part: feature:275703-275753:1:exon
so has part: feature:276297-276389:1:exon
so has part: feature:277675-277803:1:exon
so has part: feature:278398-278504:1:exon
so has part: feature:280754-280910:1:exon
so has part: feature:281396-281425:1:exon
so has part: feature:285355-285453:1:exon

XP_039944308.1
type: Protein
SIO_000068: ncbiprotein

position:266018:1
position: 266018
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:285453:1
position: 285453
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:266018-266217:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:271276-271381:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:273369-273499:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:275115-275172:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:275703-275753:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:276297-276389:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:277675-277803:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:278398-278504:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:280754-280910:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:281396-281425:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:285355-285453:1:exon

CERS5
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 43150
gene: CERS5
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ceramide synthase 5 isoform X4
translation: MAAAAAAALRAWFWNERFWLPHNVTWADLAGEPGPPGSGLQYPRAAHVLSAFPLALGIFAVRLLFERFIAKPCAIKLGIQDSGPHRAQPNAILEKVFTSITKSPDGKRLEGLSKQLDWDVRKIQRWFRHRRNQDKPTTLTKFCESMWRFTFYLSIFFYGIRFLWTAPWFWDTRQCWYNYPFQPLTSRLYYYYILELAFYWSLMFSQFTDIKRKDFLIMFVHHLATIGLITFSYMNNMVRVGTLVLCLHDASDFLLEAAKLANYAKYQRLCDAFFMLFGVVFIVTRLGIYPFWILNTTLFESWELIGPYPSWWLFNGLLVTLQVLHVIWSYLIIRTASKALVRGKPMEVLLNGSTAFGWISHCPAFPITTRSFHPRR
SIO_010081: CERS5
subclass of: SO_0000673
so part of: CERS5
location: join(266018..266217,271276..271381,273369..273499,275115..275172,275703..275753,276297..276389,277675..277803,278398..278504,280754..280910,285355..285453)
location: region:266018-285453:1
so has part: feature:266018-266217:1:exon
so has part: feature:271276-271381:1:exon
so has part: feature:273369-273499:1:exon
so has part: feature:275115-275172:1:exon
so has part: feature:275703-275753:1:exon
so has part: feature:276297-276389:1:exon
so has part: feature:277675-277803:1:exon
so has part: feature:278398-278504:1:exon
so has part: feature:280754-280910:1:exon
so has part: feature:285355-285453:1:exon

XP_039944309.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:266018-266217:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:271276-271381:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:273369-273499:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:275115-275172:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:275703-275753:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:276297-276389:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:277675-277803:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:278398-278504:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:280754-280910:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:285355-285453:1:exon

CERS5
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 43150
gene: CERS5
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ceramide synthase 5 isoform X1
translation: MAAAAAAALRAWFWNERFWLPHNVTWADLAGEPGPPGSGLQYPRAAHVLSAFPLALGIFAVRLLFERFIAKPCAIKLGIQDSGPHRAQPNAILEKVFTSITKSPDGKRLEGLSKQLDWDVRKIQRWFRHRRNQDKPTTLTKFCESMWRFTFYLSIFFYGIRFLWTAPWFWDTRQCWYNYPFQPLTSRLYYYYILELAFYWSLMFSQFTDIKRKDFLIMFVHHLATIGLITFSYMNNMVRVGTLVLCLHDASDFLLEAAKLANYAKYQRLCDAFFMLFGVVFIVTRLGIYPFWILNTTLFESWELIGPYPSWWLFNGLLVTLQVLHVIWSYLIIRTASKALVRGKVSKDDRSDVESSSEEEDVTSNNTKGIFSTSSNGSNRLNGHVAGGQWTGEE
SIO_010081: CERS5
subclass of: SO_0000673
so part of: CERS5
location: join(266018..266217,271276..271381,273369..273499,275115..275172,275703..275753,276297..276389,277675..277803,278398..278504,280754..280910,283024..283176)
location: region:266018-283176:1
so has part: feature:266018-266217:1:exon
so has part: feature:271276-271381:1:exon
so has part: feature:273369-273499:1:exon
so has part: feature:275115-275172:1:exon
so has part: feature:275703-275753:1:exon
so has part: feature:276297-276389:1:exon
so has part: feature:277675-277803:1:exon
so has part: feature:278398-278504:1:exon
so has part: feature:280754-280910:1:exon
so has part: feature:283024-283176:1:exon

XP_039944307.1
type: Protein
SIO_000068: ncbiprotein

position:283176:1
position: 283176
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:266018-266217:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:271276-271381:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:273369-273499:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:275115-275172:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:275703-275753:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:276297-276389:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:277675-277803:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:278398-278504:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:280754-280910:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:283024-283176:1:exon

CERS5
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 43150
gene: CERS5
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ceramide synthase 5 isoform X2
translation: MAAAAAAALRAWFWNERFWLPHNVTWADLAGEPGPPGSGLQYPRAAHVLSAFPLALGIFAVRLLFERFIAKPCAIKLGIQDSGPHRAQPNAILEKVFTSITKSPDGKRLEGLSKQLDWDVRKIQRWFRHRRNQDKPTTLTKFCESMWRFTFYLSIFFYGIRFLWTAPWFWDTRQCWYNYPFQPLTSRLYYYYILELAFYWSLMFSQFTDIKRKDFLIMFVHHLATIGLITFSYMNNMVRVGTLVLCLHDASDFLLEAAKLANYAKYQRLCDAFFMLFGVVFIVTRLGIYPFWILNTTLFESWELIGPYPSWWLFNGLLVTLQVLHVIWSYLIIRTASKALVRGKIGAGQFHPVHVSVTCGSVCSLKHVCVEAKTKAEPWSGGFSAFSFTPWS
SIO_010081: CERS5
subclass of: SO_0000673
so part of: CERS5
location: join(266018..266217,271276..271381,273369..273499,275115..275172,275703..275753,276297..276389,277675..277803,278398..278504,280754..280910,281396..281542)
location: region:266018-281542:1
so has part: feature:266018-266217:1:exon
so has part: feature:271276-271381:1:exon
so has part: feature:273369-273499:1:exon
so has part: feature:275115-275172:1:exon
so has part: feature:275703-275753:1:exon
so has part: feature:276297-276389:1:exon
so has part: feature:277675-277803:1:exon
so has part: feature:278398-278504:1:exon
so has part: feature:280754-280910:1:exon
so has part: feature:281396-281542:1:exon

XP_058279800.1
type: Protein
SIO_000068: ncbiprotein

position:281542:1
position: 281542
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:266018-266217:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:271276-271381:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:273369-273499:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:275115-275172:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:275703-275753:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:276297-276389:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:277675-277803:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:278398-278504:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:280754-280910:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:281396-281542:1:exon

CERS5
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 43150
gene: CERS5
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ceramide synthase 5 isoform X6
translation: MAAAAAAALRAWFWNERFWLPHNVTWADLAGEPGPPGSGLQYPRAAHVLSAFPLALGIFAVRLLFERFIAKPCAIKLGIQDSGPHRAQPNAILEKVFTSITKSPDGKRLEGLSKQLDWDVRKIQRWFRHRRNQDKPTTLTKFCESMWRFTFYLSIFFYGIRFLWTAPWFWDTRQCWYNYPFQPLTSRLYYYYILELAFYWSLMFSQFTDIKRKDFLIMFVHHLATIGLITFSYMNNMVRVGTLVLCLHDASDFLLEAAKLANYAKYQRLCDAFFMLFGVVFIVTRLGIYPFWILNTTLFESWELIGPYPSWWLFNGLLVTLQVLHVIWSYLIIRTASKALVRGKVT
SIO_010081: CERS5
subclass of: SO_0000673
so part of: CERS5
location: join(266018..266217,271276..271381,273369..273499,275115..275172,275703..275753,276297..276389,277675..277803,278398..278504,280754..280910,281328..281336)
location: region:266018-281336:1
so has part: feature:266018-266217:1:exon
so has part: feature:271276-271381:1:exon
so has part: feature:273369-273499:1:exon
so has part: feature:275115-275172:1:exon
so has part: feature:275703-275753:1:exon
so has part: feature:276297-276389:1:exon
so has part: feature:277675-277803:1:exon
so has part: feature:278398-278504:1:exon
so has part: feature:280754-280910:1:exon
so has part: feature:281328-281336:1:exon

XP_058279801.1
type: Protein
SIO_000068: ncbiprotein

position:281336:1
position: 281336
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:266018-266217:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:271276-271381:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:273369-273499:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:275115-275172:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:275703-275753:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:276297-276389:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:277675-277803:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:278398-278504:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:280754-280910:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:281328-281336:1:exon

CERS5
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 43150
gene: CERS5
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ceramide synthase 5 isoform X5
translation: MAAAAAAALRAWFWNERFWLPHNVTWADLAGEPGPPGSGLQYPRAAHVLSAFPLALGIFAVRLLFERFIAKPCAIKLGIQDSGPHRAQPNAILEKVFTSITKSPDGKRLEGLSKQLDWDVRKIQRWFRHRRNQDKPTTLTKFCESMWRFTFYLSIFFYGIRFLWTAPWFWDTRQCWYNYPFQPLTSRLYYYYILELAFYWSLMFSQFTDIKRKDFLIMFVHHLATIGLITFSYMNNMVRVGTLVLCLHDASDFLLEAAKLANYAKYQRLCDAFFMLFGVVFIVTRLGIYPFWILNTTLFESWELIGPYPSWWLFNGLLVTLQVLHVIWSYLIIRTASKALVRGKLPLHMERGLEK
SIO_010081: CERS5
subclass of: SO_0000673
so part of: CERS5
location: join(266018..266217,271276..271381,273369..273499,275115..275172,275703..275753,276297..276389,277675..277803,278398..278504,280754..280910,281131..281166)
location: region:266018-281166:1
so has part: feature:266018-266217:1:exon
so has part: feature:271276-271381:1:exon
so has part: feature:273369-273499:1:exon
so has part: feature:275115-275172:1:exon
so has part: feature:275703-275753:1:exon
so has part: feature:276297-276389:1:exon
so has part: feature:277675-277803:1:exon
so has part: feature:278398-278504:1:exon
so has part: feature:280754-280910:1:exon
so has part: feature:281131-281166:1:exon

XP_039944310.1
type: Protein
SIO_000068: ncbiprotein

position:281166:1
position: 281166
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:266018-266217:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:271276-271381:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:273369-273499:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:275115-275172:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:275703-275753:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:276297-276389:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:277675-277803:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:278398-278504:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:280754-280910:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:281131-281166:1:exon

LOC120764415
type: Gene
subclass of: SO_0000704
RO_0002162: 43150
gene: LOC120764415
note: cytochrome c oxidase assembly protein COX14 homolog; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(284485..285757)
location: region:284485-285757:-1
so has part: feature:284485-285757:-1:exon
subclass of: SO_0000010

120764415
type: Gene
SIO_000068: ncbigene

position:284485:-1
position: 284485
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:285757:-1
position: 285757
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:284485-285757:-1:exon

LOC120764415
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 43150
gene: LOC120764415
product: cytochrome c oxidase assembly protein COX14 homolog
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_040088379.1
SIO_010081: LOC120764415
subclass of: SO_0000673
so part of: LOC120764415
location: complement(join(284485..284772,285687..285757))
location: region:284485-285757:-1
so has part: feature:285687-285757:-1:exon
so has part: feature:284485-284772:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:285687-285757:-1:exon

position:285687:-1
position: 285687
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:284485-284772:-1:exon

position:284772:-1
position: 284772
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC120764415
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 43150
gene: LOC120764415
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cytochrome c oxidase assembly protein COX14 homolog
translation: MVSRKQLADFGYKAFSGSMMLLTVYAGYLCSVRVQRMLQHRRERENAPGPES
SIO_010081: LOC120764415
subclass of: SO_0000673
so part of: LOC120764415
location: complement(284606..284764)
location: region:284606-284764:-1
so has part: feature:284606-284764:-1:exon

XP_039944313.1
type: Protein
SIO_000068: ncbiprotein

position:284606:-1
position: 284606
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:284764:-1
position: 284764
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:284606-284764:-1:exon

GPD1
type: Gene
subclass of: SO_0000704
RO_0002162: 43150
gene: GPD1
note: glycerol-3-phosphate dehydrogenase 1; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(287463..292533)
location: region:287463-292533:-1
so has part: feature:287463-292533:-1:exon
subclass of: SO_0000010

120764413
type: Gene
SIO_000068: ncbigene

position:287463:-1
position: 287463
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:292533:-1
position: 292533
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:287463-292533:-1:exon

GPD1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 43150
gene: GPD1
product: glycerol-3-phosphate dehydrogenase 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 1 long SRA read, 31 Proteins
transcript id: XM_040088377.2
SIO_010081: GPD1
subclass of: SO_0000673
so part of: GPD1
location: complement(join(287463..288875,289106..289212,289625..289858,290033..290145,291018..291156,291565..291705,292070..292247,292418..292533))
location: region:287463-292533:-1
so has part: feature:292418-292533:-1:exon
so has part: feature:292070-292247:-1:exon
so has part: feature:291565-291705:-1:exon
so has part: feature:291018-291156:-1:exon
so has part: feature:290033-290145:-1:exon
so has part: feature:289625-289858:-1:exon
so has part: feature:289106-289212:-1:exon
so has part: feature:287463-288875:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:292418-292533:-1:exon

position:292418:-1
position: 292418
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:292070-292247:-1:exon

position:292070:-1
position: 292070
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:292247:-1
position: 292247
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:291565-291705:-1:exon

position:291565:-1
position: 291565
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:291705:-1
position: 291705
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:291018-291156:-1:exon

position:291018:-1
position: 291018
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:291156:-1
position: 291156
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:290033-290145:-1:exon

position:290033:-1
position: 290033
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:290145:-1
position: 290145
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:289625-289858:-1:exon

position:289625:-1
position: 289625
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:289858:-1
position: 289858
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:289106-289212:-1:exon

position:289106:-1
position: 289106
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:289212:-1
position: 289212
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:287463-288875:-1:exon

position:288875:-1
position: 288875
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

GPD1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 43150
gene: GPD1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: glycerol-3-phosphate dehydrogenase [NAD(+)], cytoplasmic
translation: MGGKKVCIVGSGNWGSAIAKIVGSNAARLSSFESQVNMWVLEEEVGGRRLTDIINTEHENVKYLPGHKLPPNVVAEPDLLKACAGADVLLFVVPHQFIGKICDQLKGHVKKEAVGMSLIKGVDEGPDGLRLISDIIHEKLGIEMNVLMGANIAKEVAEEKFCETTIGCKNTKHGQMLKDLMQTPNFRVSVVQEADTVEICGALKNVVAVGAGFCDGLGYGDNTKAAVIRLGLMEMIGFAKLFCKGPVTSSTFMESCGIADLITTCYGGRNRKVAEAFAKTGKSIEQLEKEMLNGQKLQGPQTSAELHQILKSKNVVEKFPLFTAVYQICYEGKPVTDFIMCLQNHPAHM
SIO_010081: GPD1
subclass of: SO_0000673
so part of: GPD1
location: complement(join(288779..288875,289106..289212,289625..289858,290033..290145,291018..291156,291565..291705,292070..292247,292418..292458))
location: region:288779-292458:-1
so has part: feature:292418-292458:-1:exon
so has part: feature:292070-292247:-1:exon
so has part: feature:291565-291705:-1:exon
so has part: feature:291018-291156:-1:exon
so has part: feature:290033-290145:-1:exon
so has part: feature:289625-289858:-1:exon
so has part: feature:289106-289212:-1:exon
so has part: feature:288779-288875:-1:exon

XP_039944311.1
type: Protein
SIO_000068: ncbiprotein

position:288779:-1
position: 288779
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:292458:-1
position: 292458
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:292418-292458:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:292070-292247:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:291565-291705:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:291018-291156:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:290033-290145:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:289625-289858:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:289106-289212:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:288779-288875:-1:exon

SMARCD1
type: Gene
subclass of: SO_0000704
RO_0002162: 43150
gene: SMARCD1
note: SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(293675..300072)
location: region:293675-300072:-1
so has part: feature:293675-300072:-1:exon
subclass of: SO_0000010

120764414
type: Gene
SIO_000068: ncbigene

position:293675:-1
position: 293675
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:300072:-1
position: 300072
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:293675-300072:-1:exon

SMARCD1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 43150
gene: SMARCD1
product: SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_040088378.1
SIO_010081: SMARCD1
subclass of: SO_0000673
so part of: SMARCD1
location: complement(join(293675..295317,295490..295591,295832..295954,296276..296411,296849..296946,297051..297212,297500..297601,297909..298025,298510..298632,298877..298999,299094..299136,299888..300072))
location: region:293675-300072:-1
so has part: feature:299888-300072:-1:exon
so has part: feature:299094-299136:-1:exon
so has part: feature:298877-298999:-1:exon
so has part: feature:298510-298632:-1:exon
so has part: feature:297909-298025:-1:exon
so has part: feature:297500-297601:-1:exon
so has part: feature:297051-297212:-1:exon
so has part: feature:296849-296946:-1:exon
so has part: feature:296276-296411:-1:exon
so has part: feature:295832-295954:-1:exon
so has part: feature:295490-295591:-1:exon
so has part: feature:293675-295317:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:299888-300072:-1:exon

position:299888:-1
position: 299888
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:299094-299136:-1:exon

position:299094:-1
position: 299094
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:299136:-1
position: 299136
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:298877-298999:-1:exon

position:298877:-1
position: 298877
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:298999:-1
position: 298999
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:298510-298632:-1:exon

position:298510:-1
position: 298510
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:298632:-1
position: 298632
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:297909-298025:-1:exon

position:297909:-1
position: 297909
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:298025:-1
position: 298025
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:297500-297601:-1:exon

position:297500:-1
position: 297500
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:297601:-1
position: 297601
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:297051-297212:-1:exon

position:297051:-1
position: 297051
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:297212:-1
position: 297212
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:296849-296946:-1:exon

position:296849:-1
position: 296849
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:296946:-1
position: 296946
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:296276-296411:-1:exon

position:296276:-1
position: 296276
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:296411:-1
position: 296411
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:295832-295954:-1:exon

position:295832:-1
position: 295832
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:295954:-1
position: 295954
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:295490-295591:-1:exon

position:295490:-1
position: 295490
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:295591:-1
position: 295591
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:293675-295317:-1:exon

position:295317:-1
position: 295317
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

SMARCD1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 43150
gene: SMARCD1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 1
translation: MLPGGRMAPQGPAMGPPGYGGSPAVRPALAQAGLDQARKRPAPQQLQQVQPQAVPNRNHNAKKKKMADKILPQRIRELVPESQAYMDLLAFERKLDQTIMRKRLDIQEALKRPIKQKRKLRIFISNTFNPAKSDAEDGEGTVASWELRVEGRLLEDSALSKYDATKQKRKFSSFFKSLVIELDKDLYGPDNHLVEWHRTATTQETDGFQVKRPGDVNVRCTVLLMLDYQPPQFKLDPRLARLLGIHTQTRPVIIQALWQYIKTHKLQDPHEREFVICDKYLQQIFESQRMKFSEIPQRLHALLMPPEPIIINHVISVDPNDQKKTACYDIDVEVDDTLKTQMNSFLLSTASQQEIAALDNKIHETIETINQLKTQREFMLSFARDPQGFINDWLQSQCRDLKTMTDVVGNPEEERRAEFYFQPWAQEAVCRYFYSKVQQRRQELEQALGIRNT
SIO_010081: SMARCD1
subclass of: SO_0000673
so part of: SMARCD1
location: complement(join(295264..295317,295490..295591,295832..295954,296276..296411,296849..296946,297051..297212,297500..297601,297909..298025,298510..298632,298877..298999,299094..299136,299888..300066))
location: region:295264-300066:-1
so has part: feature:299888-300066:-1:exon
so has part: feature:299094-299136:-1:exon
so has part: feature:298877-298999:-1:exon
so has part: feature:298510-298632:-1:exon
so has part: feature:297909-298025:-1:exon
so has part: feature:297500-297601:-1:exon
so has part: feature:297051-297212:-1:exon
so has part: feature:296849-296946:-1:exon
so has part: feature:296276-296411:-1:exon
so has part: feature:295832-295954:-1:exon
so has part: feature:295490-295591:-1:exon
so has part: feature:295264-295317:-1:exon

XP_039944312.1
type: Protein
SIO_000068: ncbiprotein

position:295264:-1
position: 295264
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:300066:-1
position: 300066
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:299888-300066:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:299094-299136:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:298877-298999:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:298510-298632:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:297909-298025:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:297500-297601:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:297051-297212:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:296849-296946:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:296276-296411:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:295832-295954:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:295490-295591:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:295264-295317:-1:exon

ASIC1
type: Gene
subclass of: SO_0000704
RO_0002162: 43150
gene: ASIC1
note: acid sensing ion channel subunit 1; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(302851..321818)
location: region:302851-321818:-1
so has part: feature:302851-321818:-1:exon
subclass of: SO_0000010

120764409
type: Gene
SIO_000068: ncbigene

position:302851:-1
position: 302851
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:321818:-1
position: 321818
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:302851-321818:-1:exon

ASIC1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 43150
gene: ASIC1
product: acid sensing ion channel subunit 1, transcript variant X2
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_040088370.2
SIO_010081: ASIC1
subclass of: SO_0000673
so part of: ASIC1
location: complement(join(302851..304796,305029..305133,305226..305305,305554..305645,305731..305884,305964..306020,306101..306251,306439..306566,307000..307150,319429..319624,320504..320898,321311..321818))
location: region:302851-321818:-1
so has part: feature:321311-321818:-1:exon
so has part: feature:320504-320898:-1:exon
so has part: feature:319429-319624:-1:exon
so has part: feature:307000-307150:-1:exon
so has part: feature:306439-306566:-1:exon
so has part: feature:306101-306251:-1:exon
so has part: feature:305964-306020:-1:exon
so has part: feature:305731-305884:-1:exon
so has part: feature:305554-305645:-1:exon
so has part: feature:305226-305305:-1:exon
so has part: feature:305029-305133:-1:exon
so has part: feature:302851-304796:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:321311-321818:-1:exon

position:321311:-1
position: 321311
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:320504-320898:-1:exon

position:320504:-1
position: 320504
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:320898:-1
position: 320898
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:319429-319624:-1:exon

position:319429:-1
position: 319429
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:319624:-1
position: 319624
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:307000-307150:-1:exon

position:307000:-1
position: 307000
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:307150:-1
position: 307150
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:306439-306566:-1:exon

position:306439:-1
position: 306439
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:306566:-1
position: 306566
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:306101-306251:-1:exon

position:306101:-1
position: 306101
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:306251:-1
position: 306251
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:305964-306020:-1:exon

position:305964:-1
position: 305964
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:306020:-1
position: 306020
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:305731-305884:-1:exon

position:305731:-1
position: 305731
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:305884:-1
position: 305884
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:305554-305645:-1:exon

position:305554:-1
position: 305554
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:305645:-1
position: 305645
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:305226-305305:-1:exon

position:305226:-1
position: 305226
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:305305:-1
position: 305305
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:305029-305133:-1:exon

position:305029:-1
position: 305029
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:305133:-1
position: 305133
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:302851-304796:-1:exon

position:304796:-1
position: 304796
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

ASIC1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 43150
gene: ASIC1
product: acid sensing ion channel subunit 1, transcript variant X1
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_040088369.2
SIO_010081: ASIC1
subclass of: SO_0000673
so part of: ASIC1
location: complement(join(302851..304796,305029..305133,305226..305305,305554..305645,305731..305884,305964..306020,306101..306251,306439..306566,307000..307150,307888..308760))
location: region:302851-308760:-1
so has part: feature:307888-308760:-1:exon
so has part: feature:307000-307150:-1:exon
so has part: feature:306439-306566:-1:exon
so has part: feature:306101-306251:-1:exon
so has part: feature:305964-306020:-1:exon
so has part: feature:305731-305884:-1:exon
so has part: feature:305554-305645:-1:exon
so has part: feature:305226-305305:-1:exon
so has part: feature:305029-305133:-1:exon
so has part: feature:302851-304796:-1:exon

position:308760:-1
position: 308760
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:307888-308760:-1:exon

position:307888:-1
position: 307888
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:307000-307150:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:306439-306566:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:306101-306251:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:305964-306020:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:305731-305884:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:305554-305645:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:305226-305305:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:305029-305133:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:302851-304796:-1:exon

ASIC1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 43150
gene: ASIC1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: acid-sensing ion channel 1 isoform X2
translation: MMDLKVDEEEVDSGQPVSIQAFASSSTLHGLSHIFSYERLSLKRVVWALCFLGSLALLALVCTNRIQYYFLYPHVTKLDEVAATRLTFPAVTFCNLNEFRFSRVTKNDLYHAGELLALLNNRYEIPDIQTADEKQLEILQDKANFRNFKPKPFNMLEFYDRAGHDIREMLLSCFFRGEQCTPEDFKVVFTRYGKCYTFNAGQDGKPRLITMKGGTGNGLEIMLDIQQDEYLPVWGETDETSFEAGIKVQIHSQDEPPLIDQLGFGVAPGFQTFVSCQEQRLIYLPPPWGDCKAVAGDSEFYDTYSITACRIDCETRYLVENCNCRMVHMPGDAPYCTPEQYKECADPALDFLVEKDNEYCICEMPCNMTRYGKELSMVKIPSKASAKYLAKKYNKSEQYIGENILVLDIFFEALNYETIEQKKAYEVAGLLGDIGGQMGLFIGASILTVLELFDYAYEVIKHRLCRRGKCRKNHKRNNTDKGVALSMDDVKRHNPCESIRGHPAGMTYAANILPHHPARGTFEDFTC
SIO_010081: ASIC1
subclass of: SO_0000673
so part of: ASIC1
location: complement(join(304692..304796,305029..305133,305226..305305,305554..305645,305731..305884,305964..306020,306101..306251,306439..306566,307000..307150,319429..319624,320504..320868))
location: region:304692-320868:-1
so has part: feature:320504-320868:-1:exon
so has part: feature:319429-319624:-1:exon
so has part: feature:307000-307150:-1:exon
so has part: feature:306439-306566:-1:exon
so has part: feature:306101-306251:-1:exon
so has part: feature:305964-306020:-1:exon
so has part: feature:305731-305884:-1:exon
so has part: feature:305554-305645:-1:exon
so has part: feature:305226-305305:-1:exon
so has part: feature:305029-305133:-1:exon
so has part: feature:304692-304796:-1:exon

XP_039944304.1
type: Protein
SIO_000068: ncbiprotein

position:304692:-1
position: 304692
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:320868:-1
position: 320868
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:320504-320868:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:319429-319624:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:307000-307150:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:306439-306566:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:306101-306251:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:305964-306020:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:305731-305884:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:305554-305645:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:305226-305305:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:305029-305133:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:304692-304796:-1:exon

ASIC1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 43150
gene: ASIC1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: acid-sensing ion channel 1 isoform X1
translation: MPLQIFCTISFSSEEGPEDAAATGKGDDEADEFLYGQEEDEEDQEDTAATTDFVAFASSCTLHGLSHIFVEGSLGARQALWALAFLLSLSVFLYQVADRIAYYLEYHHVTLLSEEDSPEMTFPAVTFCNINRVRLSQLSHEDLLYLAPLVDYEPGMELGFAPARPGPWEEDEPLNLYGFFNRTCHQLEDMLLSCSYRGQRCGPGDFAPVFTRYGKCYTFNAGQDGKPRLITMKGGTGNGLEIMLDIQQDEYLPVWGETDETSFEAGIKVQIHSQDEPPLIDQLGFGVAPGFQTFVSCQEQRLIYLPPPWGDCKAVAGDSEFYDTYSITACRIDCETRYLVENCNCRMVHMPGDAPYCTPEQYKECADPALDFLVEKDNEYCICEMPCNMTRYGKELSMVKIPSKASAKYLAKKYNKSEQYIGENILVLDIFFEALNYETIEQKKAYEVAGLLGDIGGQMGLFIGASILTVLELFDYAYEVIKHRLCRRGKCRKNHKRNNTDKGVALSMDDVKRHNPCESIRGHPAGMTYAANILPHHPARGTFEDFTC
SIO_010081: ASIC1
subclass of: SO_0000673
so part of: ASIC1
location: complement(join(304692..304796,305029..305133,305226..305305,305554..305645,305731..305884,305964..306020,306101..306251,306439..306566,307000..307150,307888..308511))
location: region:304692-308511:-1
so has part: feature:307888-308511:-1:exon
so has part: feature:307000-307150:-1:exon
so has part: feature:306439-306566:-1:exon
so has part: feature:306101-306251:-1:exon
so has part: feature:305964-306020:-1:exon
so has part: feature:305731-305884:-1:exon
so has part: feature:305554-305645:-1:exon
so has part: feature:305226-305305:-1:exon
so has part: feature:305029-305133:-1:exon
so has part: feature:304692-304796:-1:exon

XP_039944303.1
type: Protein
SIO_000068: ncbiprotein

position:308511:-1
position: 308511
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:307888-308511:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:307000-307150:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:306439-306566:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:306101-306251:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:305964-306020:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:305731-305884:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:305554-305645:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:305226-305305:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:305029-305133:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:304692-304796:-1:exon

RACGAP1
type: Gene
subclass of: SO_0000704
RO_0002162: 43150
gene: RACGAP1
note: Rac GTPase activating protein 1; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 334906..343256
location: region:334906-343256:1
so has part: feature:334906-343256:1:exon
subclass of: SO_0000010

120764408
type: Gene
SIO_000068: ncbigene

position:334906:1
position: 334906
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:343256:1
position: 343256
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:334906-343256:1:exon

RACGAP1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 43150
gene: RACGAP1
product: Rac GTPase activating protein 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 ESTs, 2 long SRA reads, 15 Proteins
transcript id: XM_040088366.2
SIO_010081: RACGAP1
subclass of: SO_0000673
so part of: RACGAP1
location: join(334906..334968,336138..336226,336783..336985,337322..337458,337656..337725,337942..337995,338710..338787,338904..339021,339179..339309,339743..339907,340261..340356,340548..340746,341003..341108,341365..341497,341583..341718,341945..342056,342304..343203)
location: region:334906-343203:1
so has part: feature:334906-334968:1:exon
so has part: feature:336138-336226:1:exon
so has part: feature:336783-336985:1:exon
so has part: feature:337322-337458:1:exon
so has part: feature:337656-337725:1:exon
so has part: feature:337942-337995:1:exon
so has part: feature:338710-338787:1:exon
so has part: feature:338904-339021:1:exon
so has part: feature:339179-339309:1:exon
so has part: feature:339743-339907:1:exon
so has part: feature:340261-340356:1:exon
so has part: feature:340548-340746:1:exon
so has part: feature:341003-341108:1:exon
so has part: feature:341365-341497:1:exon
so has part: feature:341583-341718:1:exon
so has part: feature:341945-342056:1:exon
so has part: feature:342304-343203:1:exon

position:343203:1
position: 343203
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:334906-334968:1:exon

position:334968:1
position: 334968
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:336138-336226:1:exon

position:336138:1
position: 336138
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:336226:1
position: 336226
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:336783-336985:1:exon

position:336783:1
position: 336783
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:336985:1
position: 336985
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:337322-337458:1:exon

position:337322:1
position: 337322
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:337458:1
position: 337458
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:337656-337725:1:exon

position:337656:1
position: 337656
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:337725:1
position: 337725
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:337942-337995:1:exon

position:337942:1
position: 337942
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:337995:1
position: 337995
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:338710-338787:1:exon

position:338710:1
position: 338710
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:338787:1
position: 338787
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:338904-339021:1:exon

position:338904:1
position: 338904
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:339021:1
position: 339021
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:339179-339309:1:exon

position:339179:1
position: 339179
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:339309:1
position: 339309
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:339743-339907:1:exon

position:339743:1
position: 339743
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:339907:1
position: 339907
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:340261-340356:1:exon

position:340261:1
position: 340261
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:340356:1
position: 340356
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:340548-340746:1:exon

position:340548:1
position: 340548
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:340746:1
position: 340746
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:341003-341108:1:exon

position:341003:1
position: 341003
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:341108:1
position: 341108
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:341365-341497:1:exon

position:341365:1
position: 341365
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:341497:1
position: 341497
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:341583-341718:1:exon

position:341583:1
position: 341583
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:341718:1
position: 341718
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:341945-342056:1:exon

position:341945:1
position: 341945
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:342056:1
position: 342056
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:342304-343203:1:exon

position:342304:1
position: 342304
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

RACGAP1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 43150
gene: RACGAP1
product: Rac GTPase activating protein 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 ESTs, 4 long SRA reads, 15 Proteins
transcript id: XM_040088367.1
SIO_010081: RACGAP1
subclass of: SO_0000673
so part of: RACGAP1
location: join(334930..335002,336138..336226,336783..336985,337322..337458,337656..337725,337942..337995,338710..338787,338904..339021,339179..339309,339743..339907,340261..340356,340548..340746,341003..341108,341365..341497,341583..341718,341945..342056,342304..343256)
location: region:334930-343256:1
so has part: feature:334930-335002:1:exon
so has part: feature:336138-336226:1:exon
so has part: feature:336783-336985:1:exon
so has part: feature:337322-337458:1:exon
so has part: feature:337656-337725:1:exon
so has part: feature:337942-337995:1:exon
so has part: feature:338710-338787:1:exon
so has part: feature:338904-339021:1:exon
so has part: feature:339179-339309:1:exon
so has part: feature:339743-339907:1:exon
so has part: feature:340261-340356:1:exon
so has part: feature:340548-340746:1:exon
so has part: feature:341003-341108:1:exon
so has part: feature:341365-341497:1:exon
so has part: feature:341583-341718:1:exon
so has part: feature:341945-342056:1:exon
so has part: feature:342304-343256:1:exon

position:334930:1
position: 334930
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:334930-335002:1:exon

position:335002:1
position: 335002
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:336138-336226:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:336783-336985:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:337322-337458:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:337656-337725:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:337942-337995:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:338710-338787:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:338904-339021:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:339179-339309:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:339743-339907:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:340261-340356:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:340548-340746:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:341003-341108:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:341365-341497:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:341583-341718:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:341945-342056:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:342304-343256:1:exon

RACGAP1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 43150
gene: RACGAP1
product: Rac GTPase activating protein 1, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 ESTs, 1 long SRA read, 15 Proteins
transcript id: XM_040088368.2
SIO_010081: RACGAP1
subclass of: SO_0000673
so part of: RACGAP1
location: join(335357..335402,336138..336226,336783..336985,337322..337458,337656..337725,337942..337995,338710..338787,338904..339021,339179..339309,339743..339907,340261..340356,340548..340746,341003..341108,341365..341497,341583..341718,341945..342056,342304..343203)
location: region:335357-343203:1
so has part: feature:335357-335402:1:exon
so has part: feature:336138-336226:1:exon
so has part: feature:336783-336985:1:exon
so has part: feature:337322-337458:1:exon
so has part: feature:337656-337725:1:exon
so has part: feature:337942-337995:1:exon
so has part: feature:338710-338787:1:exon
so has part: feature:338904-339021:1:exon
so has part: feature:339179-339309:1:exon
so has part: feature:339743-339907:1:exon
so has part: feature:340261-340356:1:exon
so has part: feature:340548-340746:1:exon
so has part: feature:341003-341108:1:exon
so has part: feature:341365-341497:1:exon
so has part: feature:341583-341718:1:exon
so has part: feature:341945-342056:1:exon
so has part: feature:342304-343203:1:exon

position:335357:1
position: 335357
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:335357-335402:1:exon

position:335402:1
position: 335402
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:336138-336226:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:336783-336985:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:337322-337458:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:337656-337725:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:337942-337995:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:338710-338787:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:338904-339021:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:339179-339309:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:339743-339907:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:340261-340356:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:340548-340746:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:341003-341108:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:341365-341497:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:341583-341718:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:341945-342056:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:342304-343203:1:exon

RACGAP1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 43150
gene: RACGAP1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: rac GTPase-activating protein 1
translation: MEIAMVNLRGLYEQLTRQAELLGEGNECQFIQLAKNFEEYRRKWQKTEHELSRYKDLLMKTEAERSALDVKLKHARNQVDVEIKRRQKAEMDCEKLERQIQLIRELLMCDASGSIQLSEEQRSVLAFLNRPQASVGTSGNKRLSTIDESGSILSDISFDKTDDSLDWDSSVVKAVRLKRREKRRSSRQFAEGPPAPQKKSRSISNTADQANESIVAKTTVMVPNDGGPIEAISTIQTVPCPRRSRRKSGPLQPWNSESSIGSKQLEPKPDTDGCGTPQHNGGVRLHDFVSKTVIKPESCVPCGKRVKFGKISLKCRDCRVVAHPECRERCPLPCIPTLTGTPVRIGEGTLMDFVPSTPPMIPSIIVHCVNEIEQRGLHETGIYRISGCDKTVRELKEKFLRAKNIPLLSKVDDIHAICGLLKDFLRSLKEPLLTFRLNKAFMEAAEISDEDNSIAAMYQAIGELPQANRDTLAFLMVHLQRVAQSPDTKMDISNLAKVFGPTIVAHAVPDPDPMTLLQDTKRQPKVVERLLLLPMDYWSQLMMVEQENIDPAHVIENTNAYSTPRTPEVQVSILGPLTTPEQQQLSKTPSSSSLSQRVRSTFSRTTPKFGSKSKSTTQLGHQGLFFPSPMLK
SIO_010081: RACGAP1
subclass of: SO_0000673
so part of: RACGAP1
location: join(336142..336226,336783..336985,337322..337458,337656..337725,337942..337995,338710..338787,338904..339021,339179..339309,339743..339907,340261..340356,340548..340746,341003..341108,341365..341497,341583..341718,341945..342056,342304..342379)
location: region:336142-342379:1
so has part: feature:336142-336226:1:exon
so has part: feature:336783-336985:1:exon
so has part: feature:337322-337458:1:exon
so has part: feature:337656-337725:1:exon
so has part: feature:337942-337995:1:exon
so has part: feature:338710-338787:1:exon
so has part: feature:338904-339021:1:exon
so has part: feature:339179-339309:1:exon
so has part: feature:339743-339907:1:exon
so has part: feature:340261-340356:1:exon
so has part: feature:340548-340746:1:exon
so has part: feature:341003-341108:1:exon
so has part: feature:341365-341497:1:exon
so has part: feature:341583-341718:1:exon
so has part: feature:341945-342056:1:exon
so has part: feature:342304-342379:1:exon

XP_039944300.1
type: Protein
SIO_000068: ncbiprotein

position:336142:1
position: 336142
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:342379:1
position: 342379
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:336142-336226:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:336783-336985:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:337322-337458:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:337656-337725:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:337942-337995:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:338710-338787:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:338904-339021:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:339179-339309:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:339743-339907:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:340261-340356:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:340548-340746:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:341003-341108:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:341365-341497:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:341583-341718:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:341945-342056:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:342304-342379:1:exon

RACGAP1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 43150
gene: RACGAP1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: rac GTPase-activating protein 1
translation: MEIAMVNLRGLYEQLTRQAELLGEGNECQFIQLAKNFEEYRRKWQKTEHELSRYKDLLMKTEAERSALDVKLKHARNQVDVEIKRRQKAEMDCEKLERQIQLIRELLMCDASGSIQLSEEQRSVLAFLNRPQASVGTSGNKRLSTIDESGSILSDISFDKTDDSLDWDSSVVKAVRLKRREKRRSSRQFAEGPPAPQKKSRSISNTADQANESIVAKTTVMVPNDGGPIEAISTIQTVPCPRRSRRKSGPLQPWNSESSIGSKQLEPKPDTDGCGTPQHNGGVRLHDFVSKTVIKPESCVPCGKRVKFGKISLKCRDCRVVAHPECRERCPLPCIPTLTGTPVRIGEGTLMDFVPSTPPMIPSIIVHCVNEIEQRGLHETGIYRISGCDKTVRELKEKFLRAKNIPLLSKVDDIHAICGLLKDFLRSLKEPLLTFRLNKAFMEAAEISDEDNSIAAMYQAIGELPQANRDTLAFLMVHLQRVAQSPDTKMDISNLAKVFGPTIVAHAVPDPDPMTLLQDTKRQPKVVERLLLLPMDYWSQLMMVEQENIDPAHVIENTNAYSTPRTPEVQVSILGPLTTPEQQQLSKTPSSSSLSQRVRSTFSRTTPKFGSKSKSTTQLGHQGLFFPSPMLK
SIO_010081: RACGAP1
subclass of: SO_0000673
so part of: RACGAP1
location: join(336142..336226,336783..336985,337322..337458,337656..337725,337942..337995,338710..338787,338904..339021,339179..339309,339743..339907,340261..340356,340548..340746,341003..341108,341365..341497,341583..341718,341945..342056,342304..342379)
location: region:336142-342379:1
so has part: feature:336142-336226:1:exon
so has part: feature:336783-336985:1:exon
so has part: feature:337322-337458:1:exon
so has part: feature:337656-337725:1:exon
so has part: feature:337942-337995:1:exon
so has part: feature:338710-338787:1:exon
so has part: feature:338904-339021:1:exon
so has part: feature:339179-339309:1:exon
so has part: feature:339743-339907:1:exon
so has part: feature:340261-340356:1:exon
so has part: feature:340548-340746:1:exon
so has part: feature:341003-341108:1:exon
so has part: feature:341365-341497:1:exon
so has part: feature:341583-341718:1:exon
so has part: feature:341945-342056:1:exon
so has part: feature:342304-342379:1:exon

XP_039944301.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:336142-336226:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:336783-336985:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:337322-337458:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:337656-337725:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:337942-337995:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:338710-338787:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:338904-339021:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:339179-339309:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:339743-339907:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:340261-340356:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:340548-340746:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:341003-341108:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:341365-341497:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:341583-341718:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:341945-342056:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:342304-342379:1:exon

RACGAP1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 43150
gene: RACGAP1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: rac GTPase-activating protein 1
translation: MEIAMVNLRGLYEQLTRQAELLGEGNECQFIQLAKNFEEYRRKWQKTEHELSRYKDLLMKTEAERSALDVKLKHARNQVDVEIKRRQKAEMDCEKLERQIQLIRELLMCDASGSIQLSEEQRSVLAFLNRPQASVGTSGNKRLSTIDESGSILSDISFDKTDDSLDWDSSVVKAVRLKRREKRRSSRQFAEGPPAPQKKSRSISNTADQANESIVAKTTVMVPNDGGPIEAISTIQTVPCPRRSRRKSGPLQPWNSESSIGSKQLEPKPDTDGCGTPQHNGGVRLHDFVSKTVIKPESCVPCGKRVKFGKISLKCRDCRVVAHPECRERCPLPCIPTLTGTPVRIGEGTLMDFVPSTPPMIPSIIVHCVNEIEQRGLHETGIYRISGCDKTVRELKEKFLRAKNIPLLSKVDDIHAICGLLKDFLRSLKEPLLTFRLNKAFMEAAEISDEDNSIAAMYQAIGELPQANRDTLAFLMVHLQRVAQSPDTKMDISNLAKVFGPTIVAHAVPDPDPMTLLQDTKRQPKVVERLLLLPMDYWSQLMMVEQENIDPAHVIENTNAYSTPRTPEVQVSILGPLTTPEQQQLSKTPSSSSLSQRVRSTFSRTTPKFGSKSKSTTQLGHQGLFFPSPMLK
SIO_010081: RACGAP1
subclass of: SO_0000673
so part of: RACGAP1
location: join(336142..336226,336783..336985,337322..337458,337656..337725,337942..337995,338710..338787,338904..339021,339179..339309,339743..339907,340261..340356,340548..340746,341003..341108,341365..341497,341583..341718,341945..342056,342304..342379)
location: region:336142-342379:1
so has part: feature:336142-336226:1:exon
so has part: feature:336783-336985:1:exon
so has part: feature:337322-337458:1:exon
so has part: feature:337656-337725:1:exon
so has part: feature:337942-337995:1:exon
so has part: feature:338710-338787:1:exon
so has part: feature:338904-339021:1:exon
so has part: feature:339179-339309:1:exon
so has part: feature:339743-339907:1:exon
so has part: feature:340261-340356:1:exon
so has part: feature:340548-340746:1:exon
so has part: feature:341003-341108:1:exon
so has part: feature:341365-341497:1:exon
so has part: feature:341583-341718:1:exon
so has part: feature:341945-342056:1:exon
so has part: feature:342304-342379:1:exon

XP_039944302.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:336142-336226:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:336783-336985:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:337322-337458:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:337656-337725:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:337942-337995:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:338710-338787:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:338904-339021:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:339179-339309:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:339743-339907:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:340261-340356:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:340548-340746:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:341003-341108:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:341365-341497:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:341583-341718:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:341945-342056:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:342304-342379:1:exon

LOC120764410
type: Gene
subclass of: SO_0000704
RO_0002162: 43150
gene: LOC120764410
note: interferon-induced protein with tetratricopeptide repeats 1-like; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(344073..347116)
location: region:344073-347116:-1
so has part: feature:344073-347116:-1:exon
subclass of: SO_0000010

120764410
type: Gene
SIO_000068: ncbigene

position:344073:-1
position: 344073
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:347116:-1
position: 347116
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:344073-347116:-1:exon

LOC120764410
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 43150
gene: LOC120764410
product: interferon-induced protein with tetratricopeptide repeats 1-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins
transcript id: XM_040088371.1
SIO_010081: LOC120764410
subclass of: SO_0000673
so part of: LOC120764410
location: complement(join(344073..346033,346867..347116))
location: region:344073-347116:-1
so has part: feature:346867-347116:-1:exon
so has part: feature:344073-346033:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:346867-347116:-1:exon

position:346867:-1
position: 346867
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:344073-346033:-1:exon

position:346033:-1
position: 346033
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC120764410
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 43150
gene: LOC120764410
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: interferon-induced protein with tetratricopeptide repeats 1-like
translation: MPTANMSKEQLKRRLDALQCHFTWKLRIDSDNLHHFLQKLDVDIKHMAHQNRVALLGLQAYLHQQNNQSTEALQSLRAAEEHNKEEEQSASTAGSLIIFGNYAWIHYLQGSYQEAETRLVQVQQLCPAPWDARLIPHILAQRGWALLAVRARNGERARECFDLALMLEPENRSFRTGLGMALYFSWKFSWQPDSANEAIIHLERIVDEQPNNYRAKIYLAGLLRRVDRERSMGLIEECAEKSSDPEVLKLSVLFWIPWSAERAVAIAQRALQQDPGYHLLYQALARSYKQHWLQAKEEEKNKVLDEAISHLQQIVQKHPDLDIILLKLQLAELLGARDPAQEEEIYKELHEKIDTLSLRYRQALSCSWGKFFLYRRGFQDKAKAKFMDAYSIPEQTDHRRDCGRRLRRMAQIYQRNGNADAADAIHRFLQETDRRMPWHSAAFSLEDGDQAHPAE
SIO_010081: LOC120764410
subclass of: SO_0000673
so part of: LOC120764410
location: complement(join(344686..346033,346867..346886))
location: region:344686-346886:-1
so has part: feature:346867-346886:-1:exon
so has part: feature:344686-346033:-1:exon

XP_039944305.1
type: Protein
SIO_000068: ncbiprotein

position:344686:-1
position: 344686
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:346886:-1
position: 346886
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:346867-346886:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:344686-346033:-1:exon

HDAC7
type: Gene
subclass of: SO_0000704
RO_0002162: 43150
gene: HDAC7
note: histone deacetylase 7; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 404928..422964
location: region:404928-422964:1
so has part: feature:404928-422964:1:exon
subclass of: SO_0000010

120764436
type: Gene
SIO_000068: ncbigene

position:404928:1
position: 404928
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:422964:1
position: 422964
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:404928-422964:1:exon

HDAC7
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 43150
gene: HDAC7
product: histone deacetylase 7
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 ESTs, 3 Proteins
transcript id: XM_040088407.2
SIO_010081: HDAC7
subclass of: SO_0000673
so part of: HDAC7
location: join(404928..405118,406640..406730,407496..407607,407844..407953,408145..408267,408856..408956,409374..409490,410015..410192,411306..411514,413290..413499,414978..415188,415647..415780,416422..416542,416680..416729,418414..418521,419013..419068,419209..419296,419637..419756,419935..420032,420243..420361,421131..421264,421558..421642,422442..422580,422826..422964)
location: region:404928-422964:1
so has part: feature:404928-405118:1:exon
so has part: feature:406640-406730:1:exon
so has part: feature:407496-407607:1:exon
so has part: feature:407844-407953:1:exon
so has part: feature:408145-408267:1:exon
so has part: feature:408856-408956:1:exon
so has part: feature:409374-409490:1:exon
so has part: feature:410015-410192:1:exon
so has part: feature:411306-411514:1:exon
so has part: feature:413290-413499:1:exon
so has part: feature:414978-415188:1:exon
so has part: feature:415647-415780:1:exon
so has part: feature:416422-416542:1:exon
so has part: feature:416680-416729:1:exon
so has part: feature:418414-418521:1:exon
so has part: feature:419013-419068:1:exon
so has part: feature:419209-419296:1:exon
so has part: feature:419637-419756:1:exon
so has part: feature:419935-420032:1:exon
so has part: feature:420243-420361:1:exon
so has part: feature:421131-421264:1:exon
so has part: feature:421558-421642:1:exon
so has part: feature:422442-422580:1:exon
so has part: feature:422826-422964:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:404928-405118:1:exon

position:405118:1
position: 405118
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:406640-406730:1:exon

position:406640:1
position: 406640
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:406730:1
position: 406730
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:407496-407607:1:exon

position:407496:1
position: 407496
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:407607:1
position: 407607
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:407844-407953:1:exon

position:407844:1
position: 407844
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:407953:1
position: 407953
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:408145-408267:1:exon

position:408145:1
position: 408145
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:408267:1
position: 408267
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:408856-408956:1:exon

position:408856:1
position: 408856
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:408956:1
position: 408956
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:409374-409490:1:exon

position:409374:1
position: 409374
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:409490:1
position: 409490
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:410015-410192:1:exon

position:410015:1
position: 410015
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:410192:1
position: 410192
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:411306-411514:1:exon

position:411306:1
position: 411306
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:411514:1
position: 411514
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:413290-413499:1:exon

position:413290:1
position: 413290
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:413499:1
position: 413499
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:414978-415188:1:exon

position:414978:1
position: 414978
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:415188:1
position: 415188
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:415647-415780:1:exon

position:415647:1
position: 415647
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:415780:1
position: 415780
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:416422-416542:1:exon

position:416422:1
position: 416422
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:416542:1
position: 416542
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:416680-416729:1:exon

position:416680:1
position: 416680
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:416729:1
position: 416729
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:418414-418521:1:exon

position:418414:1
position: 418414
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:418521:1
position: 418521
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:419013-419068:1:exon

position:419013:1
position: 419013
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:419068:1
position: 419068
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:419209-419296:1:exon

position:419209:1
position: 419209
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:419296:1
position: 419296
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:419637-419756:1:exon

position:419637:1
position: 419637
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:419756:1
position: 419756
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:419935-420032:1:exon

position:419935:1
position: 419935
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:420032:1
position: 420032
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:420243-420361:1:exon

position:420243:1
position: 420243
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:420361:1
position: 420361
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:421131-421264:1:exon

position:421131:1
position: 421131
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:421264:1
position: 421264
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:421558-421642:1:exon

position:421558:1
position: 421558
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:421642:1
position: 421642
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:422442-422580:1:exon

position:422442:1
position: 422442
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:422580:1
position: 422580
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:422826-422964:1:exon

position:422826:1
position: 422826
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

HDAC7
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 43150
gene: HDAC7
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: histone deacetylase 7
translation: MDLRIGQRVVKPQDTALLALKQQQLQHQLFLASLHQQQVEQLAHQHVRVAMESPHREAEPGQQEQELRQILNKDKSKRSAVASTVVKQKLAEVILKKQQAALERTSNAPAAALPYRSQELLEPEGPSPAVLSTFLSPCASLDPPEHFPLRKTASEPNLKVRCKPRKCLDRRKNPLTRKESAPPSLKRRPPEAIDSSPSSSSTPVSGCSSPNDSLPAEHGALPAAAHETPLAQRLMMQESSLAQFALQSAASLPAITLGLPATTSARGEAERRALPGLAHRVLPAAHSPVFIPAGLEQREPGGAPPPRLQPVIILEPSGTHAPLVAVPGLGAVPFSFAPSLVPAERLALPGPHKPLGRTRSEPLPQSPGAVQQHLLFQQHHAHFLERLKQQTHLGKRMAKSSEKPRLRQIPSSEDMDAEGPLPGVAAEPGDPGRTRAEPPRPGSSGKEPERTPRMGQAQEELVLQQAFLWDSFQRVQQQLLKRQPLADPPVVPPGHRPLSRAQSSPATATVSLPAQDAKALALPVQEQPPKPHFTTGLVYDSVMLKHQCSCGDNSNHPEHAGRIQSIWSRLQERGLRSRCECLRGRKATLEELQCVHSERHVLLYGTNPLNRLKLDNGKLAGILSQRTFVMLPCGGVGVDSDTIWNELHSSNAARWAAGSVTELAFKVATRELKNGFAVVRPPGHHADPSTAMGFCFFNSVAIAARQLQQKGKLSKILIVDWDVHHGNGTQQIFYRDPEVLYISLHRHDDGNFFPGSGAADEVGAGPGEGFNVNVAWAGGLDPPMGDPEYLAAFRTVVMPIAHEFCPDLVLVSAGFDAAEGHPAPLGGYRVSAKCFGYMTKQLMSLAGGAVVLALEGGHDLTAICDASEACVSVLLGHEPEPLPEESVRQKPNANAVRSLEAVIQVQSKYWVAVQRCASTLGCSFLEAQHHEADEVETVTALASLSVAVMVEKRAQEEPMEQEEPMNQ
SIO_010081: HDAC7
subclass of: SO_0000673
so part of: HDAC7
location: join(404975..405118,406640..406730,407496..407607,407844..407953,408145..408267,408856..408956,409374..409490,410015..410192,411306..411514,413290..413499,414978..415188,415647..415780,416422..416542,416680..416729,418414..418521,419013..419068,419209..419296,419637..419756,419935..420032,420243..420361,421131..421264,421558..421642,422442..422580,422826..422871)
location: region:404975-422871:1
so has part: feature:404975-405118:1:exon
so has part: feature:406640-406730:1:exon
so has part: feature:407496-407607:1:exon
so has part: feature:407844-407953:1:exon
so has part: feature:408145-408267:1:exon
so has part: feature:408856-408956:1:exon
so has part: feature:409374-409490:1:exon
so has part: feature:410015-410192:1:exon
so has part: feature:411306-411514:1:exon
so has part: feature:413290-413499:1:exon
so has part: feature:414978-415188:1:exon
so has part: feature:415647-415780:1:exon
so has part: feature:416422-416542:1:exon
so has part: feature:416680-416729:1:exon
so has part: feature:418414-418521:1:exon
so has part: feature:419013-419068:1:exon
so has part: feature:419209-419296:1:exon
so has part: feature:419637-419756:1:exon
so has part: feature:419935-420032:1:exon
so has part: feature:420243-420361:1:exon
so has part: feature:421131-421264:1:exon
so has part: feature:421558-421642:1:exon
so has part: feature:422442-422580:1:exon
so has part: feature:422826-422871:1:exon

XP_039944341.2
type: Protein
SIO_000068: ncbiprotein

position:404975:1
position: 404975
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:422871:1
position: 422871
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:404975-405118:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:406640-406730:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:407496-407607:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:407844-407953:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:408145-408267:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:408856-408956:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:409374-409490:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:410015-410192:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:411306-411514:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:413290-413499:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:414978-415188:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:415647-415780:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:416422-416542:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:416680-416729:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:418414-418521:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:419013-419068:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:419209-419296:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:419637-419756:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:419935-420032:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:420243-420361:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:421131-421264:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:421558-421642:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:422442-422580:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:422826-422871:1:exon

LOC120764507
type: Gene
subclass of: SO_0000704
RO_0002162: 43150
gene: LOC120764507
note: twist-related protein 2-like; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(430217..430690)
location: region:430217-430690:-1
so has part: feature:430217-430690:-1:exon
subclass of: SO_0000010

120764507
type: Gene
SIO_000068: ncbigene

position:430217:-1
position: 430217
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:430690:-1
position: 430690
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:430217-430690:-1:exon

LOC120764507
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 43150
gene: LOC120764507
product: twist-related protein 2-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 13 Proteins
transcript id: XM_040088499.1
SIO_010081: LOC120764507
subclass of: SO_0000673
so part of: LOC120764507
location: complement(430217..430690)
location: region:430217-430690:-1
so has part: feature:430217-430690:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:430217-430690:-1:exon

LOC120764507
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 43150
gene: LOC120764507
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: twist-related protein 2-like
translation: MKEENLSPESPEGSAATSEDEAERAPRKSVRKRGQGPGGAPSPQGKRSRRSPAPQPPEDAHAQRVIANVRERQRTQSLNDAFAELRKIIPTLPSDKLSKIQTLKLAARYIDFLCQVLQSDELDHKVASSCNFLAHERLSYAFSVWRMEGAWSMSASH
SIO_010081: LOC120764507
subclass of: SO_0000673
so part of: LOC120764507
location: complement(430217..430690)
location: region:430217-430690:-1
so has part: feature:430217-430690:-1:exon

XP_039944433.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:430217-430690:-1:exon

SLC48A1
type: Gene
subclass of: SO_0000704
RO_0002162: 43150
gene: SLC48A1
note: solute carrier family 48 member 1; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(439056..444693)
location: region:439056-444693:-1
so has part: feature:439056-444693:-1:exon
subclass of: SO_0000010

120764376
type: Gene
SIO_000068: ncbigene

position:439056:-1
position: 439056
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:444693:-1
position: 444693
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:439056-444693:-1:exon

SLC48A1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 43150
gene: SLC48A1
product: solute carrier family 48 member 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 5 Proteins
transcript id: XM_040088328.2
SIO_010081: SLC48A1
subclass of: SO_0000673
so part of: SLC48A1
location: complement(join(439056..439408,444295..444693))
location: region:439056-444693:-1
so has part: feature:444295-444693:-1:exon
so has part: feature:439056-439408:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:444295-444693:-1:exon

position:444295:-1
position: 444295
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:439056-439408:-1:exon

position:439408:-1
position: 439408
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

SLC48A1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 43150
gene: SLC48A1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: heme transporter HRG1
translation: MAVSRSLALRVAYASFGALSGLSVFCAWSVVPALRQPGTAAAGGLSGVLALWALITHVMYLQDYWRTWLKGLRFFLSVGILFSILSGLGFCAFLALAITQHQCESWRGWERWGGVGHRAGLGVLLPPPLLGTACSDVTAFPCPAVTWRPPPAIQKNPGIASFP
SIO_010081: SLC48A1
subclass of: SO_0000673
so part of: SLC48A1
location: complement(join(439056..439408,444295..444433))
location: region:439056-444433:-1
so has part: feature:444295-444433:-1:exon
so has part: feature:439056-439408:-1:exon

XP_039944262.1
type: Protein
SIO_000068: ncbiprotein

position:444433:-1
position: 444433
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:444295-444433:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:439056-439408:-1:exon

RAPGEF3
type: Gene
subclass of: SO_0000704
RO_0002162: 43150
gene: RAPGEF3
note: Rap guanine nucleotide exchange factor 3; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 452350..466979
location: region:452350-466979:1
so has part: feature:452350-466979:1:exon
subclass of: SO_0000010

120764425
type: Gene
SIO_000068: ncbigene

position:452350:1
position: 452350
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:466979:1
position: 466979
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:452350-466979:1:exon

RAPGEF3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 43150
gene: RAPGEF3
product: Rap guanine nucleotide exchange factor 3, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 21 Proteins
transcript id: XM_040088391.2
SIO_010081: RAPGEF3
subclass of: SO_0000673
so part of: RAPGEF3
location: join(452350..452521,455529..455582,456290..456396,456491..456612,456718..456892,457074..457158,457568..457628,457716..457792,458829..458975,459078..459190,459664..459752,460538..460616,460799..460949,461055..461137,461777..461816,461926..462007,462083..462229,462885..462982,463165..463272,463352..463533,463663..463753,464252..464302,464461..464548,464629..464693,464873..464927,465521..465592,466277..466979)
location: region:452350-466979:1
so has part: feature:452350-452521:1:exon
so has part: feature:455529-455582:1:exon
so has part: feature:456290-456396:1:exon
so has part: feature:456491-456612:1:exon
so has part: feature:456718-456892:1:exon
so has part: feature:457074-457158:1:exon
so has part: feature:457568-457628:1:exon
so has part: feature:457716-457792:1:exon
so has part: feature:458829-458975:1:exon
so has part: feature:459078-459190:1:exon
so has part: feature:459664-459752:1:exon
so has part: feature:460538-460616:1:exon
so has part: feature:460799-460949:1:exon
so has part: feature:461055-461137:1:exon
so has part: feature:461777-461816:1:exon
so has part: feature:461926-462007:1:exon
so has part: feature:462083-462229:1:exon
so has part: feature:462885-462982:1:exon
so has part: feature:463165-463272:1:exon
so has part: feature:463352-463533:1:exon
so has part: feature:463663-463753:1:exon
so has part: feature:464252-464302:1:exon
so has part: feature:464461-464548:1:exon
so has part: feature:464629-464693:1:exon
so has part: feature:464873-464927:1:exon
so has part: feature:465521-465592:1:exon
so has part: feature:466277-466979:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:452350-452521:1:exon

position:452521:1
position: 452521
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:455529-455582:1:exon

position:455529:1
position: 455529
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:455582:1
position: 455582
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:456290-456396:1:exon

position:456290:1
position: 456290
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:456396:1
position: 456396
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:456491-456612:1:exon

position:456491:1
position: 456491
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:456612:1
position: 456612
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:456718-456892:1:exon

position:456718:1
position: 456718
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:456892:1
position: 456892
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:457074-457158:1:exon

position:457074:1
position: 457074
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:457158:1
position: 457158
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:457568-457628:1:exon

position:457568:1
position: 457568
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:457628:1
position: 457628
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:457716-457792:1:exon

position:457716:1
position: 457716
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:457792:1
position: 457792
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:458829-458975:1:exon

position:458829:1
position: 458829
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:458975:1
position: 458975
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:459078-459190:1:exon

position:459078:1
position: 459078
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:459190:1
position: 459190
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:459664-459752:1:exon

position:459664:1
position: 459664
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:459752:1
position: 459752
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:460538-460616:1:exon

position:460538:1
position: 460538
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:460616:1
position: 460616
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:460799-460949:1:exon

position:460799:1
position: 460799
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:460949:1
position: 460949
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:461055-461137:1:exon

position:461055:1
position: 461055
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:461137:1
position: 461137
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:461777-461816:1:exon

position:461777:1
position: 461777
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:461816:1
position: 461816
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:461926-462007:1:exon

position:461926:1
position: 461926
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:462007:1
position: 462007
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:462083-462229:1:exon

position:462083:1
position: 462083
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:462229:1
position: 462229
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:462885-462982:1:exon

position:462885:1
position: 462885
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:462982:1
position: 462982
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:463165-463272:1:exon

position:463165:1
position: 463165
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:463272:1
position: 463272
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:463352-463533:1:exon

position:463352:1
position: 463352
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:463533:1
position: 463533
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:463663-463753:1:exon

position:463663:1
position: 463663
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:463753:1
position: 463753
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:464252-464302:1:exon

position:464252:1
position: 464252
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:464302:1
position: 464302
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:464461-464548:1:exon

position:464461:1
position: 464461
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:464548:1
position: 464548
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:464629-464693:1:exon

position:464629:1
position: 464629
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:464693:1
position: 464693
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:464873-464927:1:exon

position:464873:1
position: 464873
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:464927:1
position: 464927
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 26
SIO_000628: feature:465521-465592:1:exon

position:465521:1
position: 465521
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:465592:1
position: 465592
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 27
SIO_000628: feature:466277-466979:1:exon

position:466277:1
position: 466277
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

RAPGEF3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 43150
gene: RAPGEF3
product: Rap guanine nucleotide exchange factor 3, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 35 Proteins
transcript id: XM_040088390.2
SIO_010081: RAPGEF3
subclass of: SO_0000673
so part of: RAPGEF3
location: join(452350..452521,455529..455582,456290..456396,456491..456612,456718..456892,457074..457158,457568..457628,457716..457792,458829..458975,459078..459190,459664..459752,460538..460616,460799..460949,461055..461137,461777..461816,461926..462007,462083..462229,462885..462982,463147..463272,463352..463533,463663..463753,464252..464302,464461..464548,464629..464693,464873..464927,465521..465592,466277..466978)
location: region:452350-466978:1
so has part: feature:452350-452521:1:exon
so has part: feature:455529-455582:1:exon
so has part: feature:456290-456396:1:exon
so has part: feature:456491-456612:1:exon
so has part: feature:456718-456892:1:exon
so has part: feature:457074-457158:1:exon
so has part: feature:457568-457628:1:exon
so has part: feature:457716-457792:1:exon
so has part: feature:458829-458975:1:exon
so has part: feature:459078-459190:1:exon
so has part: feature:459664-459752:1:exon
so has part: feature:460538-460616:1:exon
so has part: feature:460799-460949:1:exon
so has part: feature:461055-461137:1:exon
so has part: feature:461777-461816:1:exon
so has part: feature:461926-462007:1:exon
so has part: feature:462083-462229:1:exon
so has part: feature:462885-462982:1:exon
so has part: feature:463147-463272:1:exon
so has part: feature:463352-463533:1:exon
so has part: feature:463663-463753:1:exon
so has part: feature:464252-464302:1:exon
so has part: feature:464461-464548:1:exon
so has part: feature:464629-464693:1:exon
so has part: feature:464873-464927:1:exon
so has part: feature:465521-465592:1:exon
so has part: feature:466277-466978:1:exon

position:466978:1
position: 466978
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:452350-452521:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:455529-455582:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:456290-456396:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:456491-456612:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:456718-456892:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:457074-457158:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:457568-457628:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:457716-457792:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:458829-458975:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:459078-459190:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:459664-459752:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:460538-460616:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:460799-460949:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:461055-461137:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:461777-461816:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:461926-462007:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:462083-462229:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:462885-462982:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:463147-463272:1:exon

position:463147:1
position: 463147
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:463352-463533:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:463663-463753:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:464252-464302:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:464461-464548:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:464629-464693:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:464873-464927:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:465521-465592:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:466277-466978:1:exon

RAPGEF3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 43150
gene: RAPGEF3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: rap guanine nucleotide exchange factor 3 isoform X1
translation: MHLFRSSSYDVRLEGAGGSLPRIQGIRWTPLLDSESSLDYGHSITQASSEKIWRAGKLLFAHLSSSRPGLIRDHKHHLRHHRQCCSGKDLVDWLLSAGVAVQTRGQAVGIGQVLVDGGVLTHVRQEWHFQDKDTQFYRFAELELSPEPGAGPRDPEELLEALGFLAQLGPDALLSMALRKPPAQRTQDELELIFEELLHIKAVAHLSNSVKRELAAVLMFEGHQRAGTVLFSQGDKGTSWYIIWKGSVNVVTHGKGLVATLHEGDDFGQLALVNDAPRAATILLREDNCHFLRVDKQDFNRILKDVEANTVRLKEHGKVVLVLQKDLQGAGSGQAASARSSRYLVMAGTPEKILEHLLEFMRLDATLYDPVDTLLGDFLLTYTVFMPTSQLCRALLHHFRAEPLEGSEQDKASYSLRKRRKILRLVSQWVLLYGRLLQGDRSTTALLQNLADLASRDPQLGGMGQEQGQERRRPRALENGDGSVSPQPKARSSGMWLGSAEEATLDSGCALRAQDKVPYEIFRADHSCLVSVLPVNAAVRDVLRALAPRLRRDREHVLVKVNSAGDTAVLPQDAVGVFTGLGLNERLFVVSVDELGGLTPHPEQLGPHAGSSDTLDLISSKDLASHLTDYDWSLFRSIHQVEMVHYIVGPQKFHEVATANLARVMRRFNELQFWVATELCLCPELARRAQLLRKFIKLAAHLKEQKNLNSFFAVMFGVSNTAVTRLAKTWERLPHKIRKLHSALERMLDPSWNHRVYRLAVAKLSPPIIPFVPLLLKDMTFIHEGNRTLAENLINFEKMHMMAKTVRVLQRCRGHAHAPLSPLRSRSPHRPEDARAVRISTCSEQSLSVRNPVSTWAYLQHLRAIDSQQELLRLSRDLEP
SIO_010081: RAPGEF3
subclass of: SO_0000673
so part of: RAPGEF3
location: join(452438..452521,455529..455582,456290..456396,456491..456612,456718..456892,457074..457158,457568..457628,457716..457792,458829..458975,459078..459190,459664..459752,460538..460616,460799..460949,461055..461137,461777..461816,461926..462007,462083..462229,462885..462982,463147..463272,463352..463533,463663..463753,464252..464302,464461..464548,464629..464693,464873..464927,465521..465592,466277..466395)
location: region:452438-466395:1
so has part: feature:452438-452521:1:exon
so has part: feature:455529-455582:1:exon
so has part: feature:456290-456396:1:exon
so has part: feature:456491-456612:1:exon
so has part: feature:456718-456892:1:exon
so has part: feature:457074-457158:1:exon
so has part: feature:457568-457628:1:exon
so has part: feature:457716-457792:1:exon
so has part: feature:458829-458975:1:exon
so has part: feature:459078-459190:1:exon
so has part: feature:459664-459752:1:exon
so has part: feature:460538-460616:1:exon
so has part: feature:460799-460949:1:exon
so has part: feature:461055-461137:1:exon
so has part: feature:461777-461816:1:exon
so has part: feature:461926-462007:1:exon
so has part: feature:462083-462229:1:exon
so has part: feature:462885-462982:1:exon
so has part: feature:463147-463272:1:exon
so has part: feature:463352-463533:1:exon
so has part: feature:463663-463753:1:exon
so has part: feature:464252-464302:1:exon
so has part: feature:464461-464548:1:exon
so has part: feature:464629-464693:1:exon
so has part: feature:464873-464927:1:exon
so has part: feature:465521-465592:1:exon
so has part: feature:466277-466395:1:exon

XP_039944324.1
type: Protein
SIO_000068: ncbiprotein

position:452438:1
position: 452438
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:466395:1
position: 466395
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:452438-452521:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:455529-455582:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:456290-456396:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:456491-456612:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:456718-456892:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:457074-457158:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:457568-457628:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:457716-457792:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:458829-458975:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:459078-459190:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:459664-459752:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:460538-460616:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:460799-460949:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:461055-461137:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:461777-461816:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:461926-462007:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:462083-462229:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:462885-462982:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:463147-463272:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:463352-463533:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:463663-463753:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:464252-464302:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:464461-464548:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:464629-464693:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:464873-464927:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:465521-465592:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:466277-466395:1:exon

RAPGEF3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 43150
gene: RAPGEF3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: rap guanine nucleotide exchange factor 3 isoform X2
translation: MHLFRSSSYDVRLEGAGGSLPRIQGIRWTPLLDSESSLDYGHSITQASSEKIWRAGKLLFAHLSSSRPGLIRDHKHHLRHHRQCCSGKDLVDWLLSAGVAVQTRGQAVGIGQVLVDGGVLTHVRQEWHFQDKDTQFYRFAELELSPEPGAGPRDPEELLEALGFLAQLGPDALLSMALRKPPAQRTQDELELIFEELLHIKAVAHLSNSVKRELAAVLMFEGHQRAGTVLFSQGDKGTSWYIIWKGSVNVVTHGKGLVATLHEGDDFGQLALVNDAPRAATILLREDNCHFLRVDKQDFNRILKDVEANTVRLKEHGKVVLVLQKDLQGAGSGQAASARSSRYLVMAGTPEKILEHLLEFMRLDATLYDPVDTLLGDFLLTYTVFMPTSQLCRALLHHFRAEPLEGSEQDKASYSLRKRRKILRLVSQWVLLYGRLLQGDRSTTALLQNLADLASRDPQLGGMGQEQGQERRRPRALENGDGSVSPQPKARSSGMWLGSAEEATLDSGCALRAQDKVPYEIFRADHSCLVSVLPVNAAVRDVLRALAPRLRRDREHVLVKVNSAGDTAVLPQDAVGVFTGLGLNERLFVVSVDELGGLLGPHAGSSDTLDLISSKDLASHLTDYDWSLFRSIHQVEMVHYIVGPQKFHEVATANLARVMRRFNELQFWVATELCLCPELARRAQLLRKFIKLAAHLKEQKNLNSFFAVMFGVSNTAVTRLAKTWERLPHKIRKLHSALERMLDPSWNHRVYRLAVAKLSPPIIPFVPLLLKDMTFIHEGNRTLAENLINFEKMHMMAKTVRVLQRCRGHAHAPLSPLRSRSPHRPEDARAVRISTCSEQSLSVRNPVSTWAYLQHLRAIDSQQELLRLSRDLEP
SIO_010081: RAPGEF3
subclass of: SO_0000673
so part of: RAPGEF3
location: join(452438..452521,455529..455582,456290..456396,456491..456612,456718..456892,457074..457158,457568..457628,457716..457792,458829..458975,459078..459190,459664..459752,460538..460616,460799..460949,461055..461137,461777..461816,461926..462007,462083..462229,462885..462982,463165..463272,463352..463533,463663..463753,464252..464302,464461..464548,464629..464693,464873..464927,465521..465592,466277..466395)
location: region:452438-466395:1
so has part: feature:452438-452521:1:exon
so has part: feature:455529-455582:1:exon
so has part: feature:456290-456396:1:exon
so has part: feature:456491-456612:1:exon
so has part: feature:456718-456892:1:exon
so has part: feature:457074-457158:1:exon
so has part: feature:457568-457628:1:exon
so has part: feature:457716-457792:1:exon
so has part: feature:458829-458975:1:exon
so has part: feature:459078-459190:1:exon
so has part: feature:459664-459752:1:exon
so has part: feature:460538-460616:1:exon
so has part: feature:460799-460949:1:exon
so has part: feature:461055-461137:1:exon
so has part: feature:461777-461816:1:exon
so has part: feature:461926-462007:1:exon
so has part: feature:462083-462229:1:exon
so has part: feature:462885-462982:1:exon
so has part: feature:463165-463272:1:exon
so has part: feature:463352-463533:1:exon
so has part: feature:463663-463753:1:exon
so has part: feature:464252-464302:1:exon
so has part: feature:464461-464548:1:exon
so has part: feature:464629-464693:1:exon
so has part: feature:464873-464927:1:exon
so has part: feature:465521-465592:1:exon
so has part: feature:466277-466395:1:exon

XP_039944325.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:452438-452521:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:455529-455582:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:456290-456396:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:456491-456612:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:456718-456892:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:457074-457158:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:457568-457628:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:457716-457792:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:458829-458975:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:459078-459190:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:459664-459752:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:460538-460616:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:460799-460949:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:461055-461137:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:461777-461816:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:461926-462007:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:462083-462229:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:462885-462982:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:463165-463272:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:463352-463533:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:463663-463753:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:464252-464302:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:464461-464548:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:464629-464693:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:464873-464927:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:465521-465592:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:466277-466395:1:exon

ENDOU
type: Gene
subclass of: SO_0000704
RO_0002162: 43150
gene: ENDOU
note: endonuclease, poly(U) specific; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 467111..476319
location: region:467111-476319:1
so has part: feature:467111-476319:1:exon
subclass of: SO_0000010

120764424
type: Gene
SIO_000068: ncbigene

position:467111:1
position: 467111
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:476319:1
position: 476319
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:467111-476319:1:exon

ENDOU
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 43150
gene: ENDOU
product: endonuclease, poly(U) specific
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins
transcript id: XM_040088389.2
SIO_010081: ENDOU
subclass of: SO_0000673
so part of: ENDOU
location: join(467111..468701,472279..472413,472764..472799,473419..473590,473961..474160,474355..474468,474545..474651,475429..475571,476205..476319)
location: region:467111-476319:1
so has part: feature:467111-468701:1:exon
so has part: feature:472279-472413:1:exon
so has part: feature:472764-472799:1:exon
so has part: feature:473419-473590:1:exon
so has part: feature:473961-474160:1:exon
so has part: feature:474355-474468:1:exon
so has part: feature:474545-474651:1:exon
so has part: feature:475429-475571:1:exon
so has part: feature:476205-476319:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:467111-468701:1:exon

position:468701:1
position: 468701
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:472279-472413:1:exon

position:472279:1
position: 472279
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:472413:1
position: 472413
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:472764-472799:1:exon

position:472764:1
position: 472764
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:472799:1
position: 472799
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:473419-473590:1:exon

position:473419:1
position: 473419
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:473590:1
position: 473590
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:473961-474160:1:exon

position:473961:1
position: 473961
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:474160:1
position: 474160
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:474355-474468:1:exon

position:474355:1
position: 474355
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:474468:1
position: 474468
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:474545-474651:1:exon

position:474545:1
position: 474545
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:474651:1
position: 474651
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:475429-475571:1:exon

position:475429:1
position: 475429
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:475571:1
position: 475571
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:476205-476319:1:exon

position:476205:1
position: 476205
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

ENDOU
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 43150
gene: ENDOU
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uridylate-specific endoribonuclease
translation: MTFGEVLGAARPWSPGCRRRAPPSLPRHPQIAASSGEPRPSPTASRGTMEPWILLAGAGIVLGCVSGHLYTAPGSCEGRCGEPFSEEDECHCHPGCETERNCCEDRERHCGPGGEGDEDGARTRDGFSSSRGSITDRELLELSEQLYGADHNKARPSDIAINPQHLAGPDETGDRQDRSPQPLYKYVNEELFSKPTYASFIKLLDNYQRATGTEEEVTAEELREQERFLEEVMKTELMQKLFVFLQGKNRYSSEEEFVQHLKEMWFGLYSRGDGERDSSGFEHVFSGEVKKGKVSGFHNWIRFYLLEKQGLVNYFSHNFNGPWDTYPDVLGLQFSWDGFYKEVGSAFIGCSPEFEFGLYSLCFLARPGRACHLSLGGHRLSVQTYPWSKSSPGSGRSFIATAYVMSP
SIO_010081: ENDOU
subclass of: SO_0000673
so part of: ENDOU
location: join(468500..468701,472279..472413,472764..472799,473419..473590,473961..474160,474355..474468,474545..474651,475429..475571,476205..476319)
location: region:468500-476319:1
so has part: feature:468500-468701:1:exon
so has part: feature:472279-472413:1:exon
so has part: feature:472764-472799:1:exon
so has part: feature:473419-473590:1:exon
so has part: feature:473961-474160:1:exon
so has part: feature:474355-474468:1:exon
so has part: feature:474545-474651:1:exon
so has part: feature:475429-475571:1:exon
so has part: feature:476205-476319:1:exon

XP_039944323.1
type: Protein
SIO_000068: ncbiprotein

position:468500:1
position: 468500
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:468500-468701:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:472279-472413:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:472764-472799:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:473419-473590:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:473961-474160:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:474355-474468:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:474545-474651:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:475429-475571:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:476205-476319:1:exon

NEUROD4
type: Gene
subclass of: SO_0000704
RO_0002162: 43150
gene: NEUROD4
note: neuronal differentiation 4; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(488054..495826)
location: region:488054-495826:-1
so has part: feature:488054-495826:-1:exon
subclass of: SO_0000010

120764428
type: Gene
SIO_000068: ncbigene

position:488054:-1
position: 488054
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:495826:-1
position: 495826
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:488054-495826:-1:exon

NEUROD4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 43150
gene: NEUROD4
product: neuronal differentiation 4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 21 Proteins
transcript id: XM_040088399.1
SIO_010081: NEUROD4
subclass of: SO_0000673
so part of: NEUROD4
location: complement(join(488054..489049,495769..495826))
location: region:488054-495826:-1
so has part: feature:495769-495826:-1:exon
so has part: feature:488054-489049:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:495769-495826:-1:exon

position:495769:-1
position: 495769
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:488054-489049:-1:exon

position:489049:-1
position: 489049
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

NEUROD4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 43150
gene: NEUROD4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: neurogenic differentiation factor 4
translation: MPQTCAKPSAMAELVSSQGWMDERPGAEAELKEGDTRTGPFGLAPALTEERDSVEEEEEEEEGEKPKRRGPKKKKMTKARLERFRARRVKANARERTRMHGLNDALDNLRRVMPCYSKTQKLSKIETLRLARNYIWALSEVLETGQTPEGKSFVEMLCKGLSQPTSNLVAGCLQLGPQPLFLEKQEEKAPACEPALAGHAFGYQGLPSPPYGSMESHLLHLKPPAFKSLVEASFGSHPSECSTPPYEGPLTPPLSISGNFSLKQDGSPELEKSYPFVAHYPSVGLAGAHGHGSHFQSSVPRYEIPLDVSYESFPPHAAAPQLGAIFSE
SIO_010081: NEUROD4
subclass of: SO_0000673
so part of: NEUROD4
location: complement(488054..489040)
location: region:488054-489040:-1
so has part: feature:488054-489040:-1:exon

XP_039944333.1
type: Protein
SIO_000068: ncbiprotein

position:489040:-1
position: 489040
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:488054-489040:-1:exon

LOC120764378
type: Gene
subclass of: SO_0000704
RO_0002162: 43150
gene: LOC120764378
note: uncharacterized LOC120764378; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(509703..534928)
location: region:509703-534928:-1
so has part: feature:509703-534928:-1:exon
subclass of: SO_0000010

120764378
type: Gene
SIO_000068: ncbigene

position:509703:-1
position: 509703
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:534928:-1
position: 534928
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:509703-534928:-1:exon

LOC120764378
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 43150
gene: LOC120764378
product: uncharacterized LOC120764378
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_058423789.1
SIO_010081: LOC120764378
subclass of: SO_0000673
so part of: LOC120764378
location: complement(join(509703..512088,512648..512798,520223..520359,527493..527658,528570..528648,528745..528808,528880..528913,529011..529074,529146..529174,529273..529336,529672..529713,529792..529855,530940..531019,531355..531396,531498..531538,533214..533321,534859..534928))
location: region:509703-534928:-1
so has part: feature:534859-534928:-1:exon
so has part: feature:533214-533321:-1:exon
so has part: feature:531498-531538:-1:exon
so has part: feature:531355-531396:-1:exon
so has part: feature:530940-531019:-1:exon
so has part: feature:529792-529855:-1:exon
so has part: feature:529672-529713:-1:exon
so has part: feature:529273-529336:-1:exon
so has part: feature:529146-529174:-1:exon
so has part: feature:529011-529074:-1:exon
so has part: feature:528880-528913:-1:exon
so has part: feature:528745-528808:-1:exon
so has part: feature:528570-528648:-1:exon
so has part: feature:527493-527658:-1:exon
so has part: feature:520223-520359:-1:exon
so has part: feature:512648-512798:-1:exon
so has part: feature:509703-512088:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:534859-534928:-1:exon

position:534859:-1
position: 534859
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:533214-533321:-1:exon

position:533214:-1
position: 533214
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:533321:-1
position: 533321
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:531498-531538:-1:exon

position:531498:-1
position: 531498
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:531538:-1
position: 531538
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:531355-531396:-1:exon

position:531355:-1
position: 531355
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:531396:-1
position: 531396
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:530940-531019:-1:exon

position:530940:-1
position: 530940
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:531019:-1
position: 531019
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:529792-529855:-1:exon

position:529792:-1
position: 529792
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:529855:-1
position: 529855
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:529672-529713:-1:exon

position:529672:-1
position: 529672
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:529713:-1
position: 529713
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:529273-529336:-1:exon

position:529273:-1
position: 529273
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:529336:-1
position: 529336
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:529146-529174:-1:exon

position:529146:-1
position: 529146
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:529174:-1
position: 529174
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:529011-529074:-1:exon

position:529011:-1
position: 529011
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:529074:-1
position: 529074
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:528880-528913:-1:exon

position:528880:-1
position: 528880
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:528913:-1
position: 528913
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:528745-528808:-1:exon

position:528745:-1
position: 528745
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:528808:-1
position: 528808
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:528570-528648:-1:exon

position:528570:-1
position: 528570
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:528648:-1
position: 528648
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:527493-527658:-1:exon

position:527493:-1
position: 527493
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:527658:-1
position: 527658
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:520223-520359:-1:exon

position:520223:-1
position: 520223
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:520359:-1
position: 520359
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:512648-512798:-1:exon

position:512648:-1
position: 512648
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:512798:-1
position: 512798
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:509703-512088:-1:exon

position:512088:-1
position: 512088
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC120764378
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 43150
gene: LOC120764378
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC120764378
translation: MHLDADHGFKEVPRDRALCQAATVEDVSSHSSRRRLVRLRAFATAKSAALSASALSQGQNADGFTWWQRAPSRELKRDVICQGEAEQVHPVTTAGGSEHGRGVRGEDVGILRRRCGWIHLVAEGPIPGEGVSPEEELKRDVICQGEAEQVHPVTTAGGSERGRGVRGEDVGRDTSPVGAEPGPPRDDGRGLGARPRRAGRGPEEETPAQWELSQVHPVTTAGGSERGRGVRGEDLRKRYQPGGGRTFPEGEAAFLGTDVDDADGFNPWQSASSWVRGFLCEGVSHCLSWGSVNNDCVTVLFFSLLSGSDGRCQLSRRVNRGCKRSQVCFESFLLFCVPSFFPIPLGGVDKITLFPHGPSLHGIKHGTLLLPGLSALPCHRDLCL
SIO_010081: LOC120764378
subclass of: SO_0000673
so part of: LOC120764378
location: complement(join(512728..512798,520223..520359,527493..527658,528570..528648,528745..528808,528880..528913,529011..529074,529146..529174,529273..529336,529672..529713,529792..529855,530940..531019,531355..531396,531498..531538,533214..533321,534859..534928))
location: region:512728-534928:-1
so has part: feature:534859-534928:-1:exon
so has part: feature:533214-533321:-1:exon
so has part: feature:531498-531538:-1:exon
so has part: feature:531355-531396:-1:exon
so has part: feature:530940-531019:-1:exon
so has part: feature:529792-529855:-1:exon
so has part: feature:529672-529713:-1:exon
so has part: feature:529273-529336:-1:exon
so has part: feature:529146-529174:-1:exon
so has part: feature:529011-529074:-1:exon
so has part: feature:528880-528913:-1:exon
so has part: feature:528745-528808:-1:exon
so has part: feature:528570-528648:-1:exon
so has part: feature:527493-527658:-1:exon
so has part: feature:520223-520359:-1:exon
so has part: feature:512728-512798:-1:exon

XP_058279772.1
type: Protein
SIO_000068: ncbiprotein

position:512728:-1
position: 512728
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:534859-534928:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:533214-533321:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:531498-531538:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:531355-531396:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:530940-531019:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:529792-529855:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:529672-529713:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:529273-529336:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:529146-529174:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:529011-529074:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:528880-528913:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:528745-528808:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:528570-528648:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:527493-527658:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:520223-520359:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:512728-512798:-1:exon

DNAJC14
type: Gene
subclass of: SO_0000704
RO_0002162: 43150
gene: DNAJC14
note: DnaJ heat shock protein family (Hsp40) member C14; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 535444..538769
location: region:535444-538769:1
so has part: feature:535444-538769:1:exon
subclass of: SO_0000010

120764405
type: Gene
SIO_000068: ncbigene

position:535444:1
position: 535444
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:538769:1
position: 538769
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:535444-538769:1:exon

DNAJC14
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 43150
gene: DNAJC14
product: DnaJ heat shock protein family (Hsp40) member C14, transcript variant X1
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_058423800.1
SIO_010081: DNAJC14
subclass of: SO_0000673
so part of: DNAJC14
location: join(535444..535553,535791..536724,536806..536912,537152..537271,537512..537672,538028..538130,538485..538769)
location: region:535444-538769:1
so has part: feature:535444-535553:1:exon
so has part: feature:535791-536724:1:exon
so has part: feature:536806-536912:1:exon
so has part: feature:537152-537271:1:exon
so has part: feature:537512-537672:1:exon
so has part: feature:538028-538130:1:exon
so has part: feature:538485-538769:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:535444-535553:1:exon

position:535553:1
position: 535553
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:535791-536724:1:exon

position:535791:1
position: 535791
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:536724:1
position: 536724
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:536806-536912:1:exon

position:536806:1
position: 536806
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:536912:1
position: 536912
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:537152-537271:1:exon

position:537152:1
position: 537152
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:537271:1
position: 537271
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:537512-537672:1:exon

position:537512:1
position: 537512
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:537672:1
position: 537672
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:538028-538130:1:exon

position:538028:1
position: 538028
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:538130:1
position: 538130
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:538485-538769:1:exon

position:538485:1
position: 538485
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

DNAJC14
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 43150
gene: DNAJC14
product: DnaJ heat shock protein family (Hsp40) member C14, transcript variant X2
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_058423801.1
SIO_010081: DNAJC14
subclass of: SO_0000673
so part of: DNAJC14
location: join(535444..535553,535791..536724,536806..536912,537152..537271,537512..537672,538485..538769)
location: region:535444-538769:1
so has part: feature:535444-535553:1:exon
so has part: feature:535791-536724:1:exon
so has part: feature:536806-536912:1:exon
so has part: feature:537152-537271:1:exon
so has part: feature:537512-537672:1:exon
so has part: feature:538485-538769:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:535444-535553:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:535791-536724:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:536806-536912:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:537152-537271:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:537512-537672:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:538485-538769:1:exon

DNAJC14
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 43150
gene: DNAJC14
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: dnaJ homolog subfamily C member 14 isoform X2
translation: MEQPRYRDGLGGSGPGGDSCAAWNGTCGHPRAATSATSPGTPGDDDDESGERDPPVPSPRGVPGPGTVPKPGSPPNAGSVANPGGVFSPEGVTNPGGVPGARSVPSPGSVPNTQSVPTPGGRCGCGGPPAAPPSPSRDIPCALGCRHRGLPEGNGDTRRTRRRPRQRHEEEEHVEDPGDTAKVHRRSLPVARAGVALCLRLLGALLALLLLFFLLLLGALRSFLRGGFARLRRCRELLGEWLLRRRGSHRAVAGGGGEEDVTRLVAMADVAEEELDPFRVLGVEPTASDTELRRAYRRLAVLVHPDKSRDPQAGVAFKVLRAGWERVSSPERRHQYEMKRLVQGELARALGAILGQLQEELREAMDAMGCTRCGGRHRRFQLDRDPHGARYCASCGGWHAAEEGDLWAESSLLGLKVTYLARMDSHIYDVTGPLPRATPPPATTSRISWPAFSREIWDRGKAGGLSPPPPGPRDTPRETPRPRGAPPGGTPSTRGGRRGGGRCPAEETPPRPPK
SIO_010081: DNAJC14
subclass of: SO_0000673
so part of: DNAJC14
location: join(535819..536724,536806..536912,537152..537271,537512..537672,538485..538735)
location: region:535819-538735:1
so has part: feature:535819-536724:1:exon
so has part: feature:536806-536912:1:exon
so has part: feature:537152-537271:1:exon
so has part: feature:537512-537672:1:exon
so has part: feature:538485-538735:1:exon

XP_058279784.1
type: Protein
SIO_000068: ncbiprotein

position:535819:1
position: 535819
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:538735:1
position: 538735
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:535819-536724:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:536806-536912:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:537152-537271:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:537512-537672:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:538485-538735:1:exon

DNAJC14
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 43150
gene: DNAJC14
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: dnaJ homolog subfamily C member 14 isoform X1
translation: MEQPRYRDGLGGSGPGGDSCAAWNGTCGHPRAATSATSPGTPGDDDDESGERDPPVPSPRGVPGPGTVPKPGSPPNAGSVANPGGVFSPEGVTNPGGVPGARSVPSPGSVPNTQSVPTPGGRCGCGGPPAAPPSPSRDIPCALGCRHRGLPEGNGDTRRTRRRPRQRHEEEEHVEDPGDTAKVHRRSLPVARAGVALCLRLLGALLALLLLFFLLLLGALRSFLRGGFARLRRCRELLGEWLLRRRGSHRAVAGGGGEEDVTRLVAMADVAEEELDPFRVLGVEPTASDTELRRAYRRLAVLVHPDKSRDPQAGVAFKVLRAGWERVSSPERRHQYEMKRLVQGELARALGAILGQLQEELREAMDAMGCTRCGGRHRRFQLDRDPHGARYCASCGGWHAAEEGDLWAESSLLGLKVTYLARMDSHIYDVTEWAGCQRVTISPDSHRVPYHLSFGARTAVPARRQRAPPKGNPPSRNDLQDFLARIFQGNLGSGEGGGTFPTPPGAAGHPQGNPQAQGGPPRGDTKHKRRKKGRRPLPR
SIO_010081: DNAJC14
subclass of: SO_0000673
so part of: DNAJC14
location: join(535819..536724,536806..536912,537152..537271,537512..537672,538028..538130,538485..538707)
location: region:535819-538707:1
so has part: feature:535819-536724:1:exon
so has part: feature:536806-536912:1:exon
so has part: feature:537152-537271:1:exon
so has part: feature:537512-537672:1:exon
so has part: feature:538028-538130:1:exon
so has part: feature:538485-538707:1:exon

XP_058279783.1
type: Protein
SIO_000068: ncbiprotein

position:538707:1
position: 538707
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:535819-536724:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:536806-536912:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:537152-537271:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:537512-537672:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:538028-538130:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:538485-538707:1:exon

ITGA7
type: Gene
subclass of: SO_0000704
RO_0002162: 43150
gene: ITGA7
note: integrin subunit alpha 7; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(538843..553036)
location: region:538843-553036:-1
so has part: feature:538843-553036:-1:exon
subclass of: SO_0000010

120764404
type: Gene
SIO_000068: ncbigene

position:538843:-1
position: 538843
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:553036:-1
position: 553036
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:538843-553036:-1:exon

ITGA7
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 43150
gene: ITGA7
product: integrin subunit alpha 7, transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins
transcript id: XM_058423799.1
SIO_010081: ITGA7
subclass of: SO_0000673
so part of: ITGA7
location: complement(join(538843..539276,540660..540782,541375..541473,541555..541665,542072..542161,542426..542593,543307..543409,543507..543584,544153..544232,544314..544394,544676..544886,545070..545182,545452..545604,545887..546056,546525..546586,546680..546775,547095..547222,547298..547386,547937..548130,548640..548847,550115..550234,550345..550476,550725..550980,551080..551159,551232..551359,552806..553036))
location: region:538843-553036:-1
so has part: feature:552806-553036:-1:exon
so has part: feature:551232-551359:-1:exon
so has part: feature:551080-551159:-1:exon
so has part: feature:550725-550980:-1:exon
so has part: feature:550345-550476:-1:exon
so has part: feature:550115-550234:-1:exon
so has part: feature:548640-548847:-1:exon
so has part: feature:547937-548130:-1:exon
so has part: feature:547298-547386:-1:exon
so has part: feature:547095-547222:-1:exon
so has part: feature:546680-546775:-1:exon
so has part: feature:546525-546586:-1:exon
so has part: feature:545887-546056:-1:exon
so has part: feature:545452-545604:-1:exon
so has part: feature:545070-545182:-1:exon
so has part: feature:544676-544886:-1:exon
so has part: feature:544314-544394:-1:exon
so has part: feature:544153-544232:-1:exon
so has part: feature:543507-543584:-1:exon
so has part: feature:543307-543409:-1:exon
so has part: feature:542426-542593:-1:exon
so has part: feature:542072-542161:-1:exon
so has part: feature:541555-541665:-1:exon
so has part: feature:541375-541473:-1:exon
so has part: feature:540660-540782:-1:exon
so has part: feature:538843-539276:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:552806-553036:-1:exon

position:552806:-1
position: 552806
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:551232-551359:-1:exon

position:551232:-1
position: 551232
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:551359:-1
position: 551359
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:551080-551159:-1:exon

position:551080:-1
position: 551080
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:551159:-1
position: 551159
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:550725-550980:-1:exon

position:550725:-1
position: 550725
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:550980:-1
position: 550980
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:550345-550476:-1:exon

position:550345:-1
position: 550345
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:550476:-1
position: 550476
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:550115-550234:-1:exon

position:550115:-1
position: 550115
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:550234:-1
position: 550234
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:548640-548847:-1:exon

position:548640:-1
position: 548640
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:548847:-1
position: 548847
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:547937-548130:-1:exon

position:547937:-1
position: 547937
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:548130:-1
position: 548130
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:547298-547386:-1:exon

position:547298:-1
position: 547298
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:547386:-1
position: 547386
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:547095-547222:-1:exon

position:547095:-1
position: 547095
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:547222:-1
position: 547222
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:546680-546775:-1:exon

position:546680:-1
position: 546680
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:546775:-1
position: 546775
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:546525-546586:-1:exon

position:546525:-1
position: 546525
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:546586:-1
position: 546586
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:545887-546056:-1:exon

position:545887:-1
position: 545887
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:546056:-1
position: 546056
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:545452-545604:-1:exon

position:545452:-1
position: 545452
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:545604:-1
position: 545604
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:545070-545182:-1:exon

position:545070:-1
position: 545070
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:545182:-1
position: 545182
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:544676-544886:-1:exon

position:544676:-1
position: 544676
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:544886:-1
position: 544886
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:544314-544394:-1:exon

position:544314:-1
position: 544314
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:544394:-1
position: 544394
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:544153-544232:-1:exon

position:544153:-1
position: 544153
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:544232:-1
position: 544232
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:543507-543584:-1:exon

position:543507:-1
position: 543507
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:543584:-1
position: 543584
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:543307-543409:-1:exon

position:543307:-1
position: 543307
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:543409:-1
position: 543409
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:542426-542593:-1:exon

position:542426:-1
position: 542426
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:542593:-1
position: 542593
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:542072-542161:-1:exon

position:542072:-1
position: 542072
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:542161:-1
position: 542161
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:541555-541665:-1:exon

position:541555:-1
position: 541555
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:541665:-1
position: 541665
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:541375-541473:-1:exon

position:541375:-1
position: 541375
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:541473:-1
position: 541473
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:540660-540782:-1:exon

position:540660:-1
position: 540660
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:540782:-1
position: 540782
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 26
SIO_000628: feature:538843-539276:-1:exon

position:539276:-1
position: 539276
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

ITGA7
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 43150
gene: ITGA7
product: integrin subunit alpha 7, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins
transcript id: XM_058423798.1
SIO_010081: ITGA7
subclass of: SO_0000673
so part of: ITGA7
location: complement(join(538848..539039,540660..540782,541375..541473,541555..541665,542072..542161,542426..542593,543307..543409,543507..543584,544153..544232,544314..544394,544676..544886,545070..545182,545452..545604,545887..546056,546525..546586,546680..546775,547095..547222,547298..547386,547937..548130,548640..548847,550115..550234,550345..550476,550725..550980,551080..551159,551232..551359,552806..553036))
location: region:538848-553036:-1
so has part: feature:552806-553036:-1:exon
so has part: feature:551232-551359:-1:exon
so has part: feature:551080-551159:-1:exon
so has part: feature:550725-550980:-1:exon
so has part: feature:550345-550476:-1:exon
so has part: feature:550115-550234:-1:exon
so has part: feature:548640-548847:-1:exon
so has part: feature:547937-548130:-1:exon
so has part: feature:547298-547386:-1:exon
so has part: feature:547095-547222:-1:exon
so has part: feature:546680-546775:-1:exon
so has part: feature:546525-546586:-1:exon
so has part: feature:545887-546056:-1:exon
so has part: feature:545452-545604:-1:exon
so has part: feature:545070-545182:-1:exon
so has part: feature:544676-544886:-1:exon
so has part: feature:544314-544394:-1:exon
so has part: feature:544153-544232:-1:exon
so has part: feature:543507-543584:-1:exon
so has part: feature:543307-543409:-1:exon
so has part: feature:542426-542593:-1:exon
so has part: feature:542072-542161:-1:exon
so has part: feature:541555-541665:-1:exon
so has part: feature:541375-541473:-1:exon
so has part: feature:540660-540782:-1:exon
so has part: feature:538848-539039:-1:exon

position:538848:-1
position: 538848
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:552806-553036:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:551232-551359:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:551080-551159:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:550725-550980:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:550345-550476:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:550115-550234:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:548640-548847:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:547937-548130:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:547298-547386:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:547095-547222:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:546680-546775:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:546525-546586:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:545887-546056:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:545452-545604:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:545070-545182:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:544676-544886:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:544314-544394:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:544153-544232:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:543507-543584:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:543307-543409:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:542426-542593:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:542072-542161:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:541555-541665:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:541375-541473:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:540660-540782:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:538848-539039:-1:exon

position:539039:-1
position: 539039
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

ITGA7
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 43150
gene: ITGA7
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: integrin alpha-7 isoform X5
translation: MAGSGCRWLPRPALWLPWLALWLPAAAAFNLDGSSPVLKDGERGSLFGAAVALHRQLSPEPAGWLLVGAPQALALPGQGANRTGGLFACPLTPELSDCWRVPIDEGADPQRESKENQWLGVSVKSQGPGGKIVTCAHRYEVRHRVRQPLETRDVIGRCFVLSQDLSVRDELDGGEWKFCEGRPQGHERFGTCQQGLAAAFSPDRRYVLLGAPGTYNWKGTLRVEQLNQSSLDLLRLDAGPFEAGGEKDQDPSLIPVPANSYFGLLFVTNIESAAPDQRVFRTPQPGERVPGAAADVAHNSYLGFSVDSGAGLTRRQQLSFVTGAPRANHTGAVVILRRDSANRLVAEAVLAGHQLTSAFGHAVAVLDLNSDGWMDLAVGAPHFFERQEEIGGAVYVYINPGGLWDSATPLRLNGSRGSMFGAALSSAGDLNHDGFEDLAVGAPFDGAGKVFIYHGSALGIVTSPAQVLDGEAVGVSAFGYSLSGGLDVDGNLYPDLLVGSLSDTVVLYRARPVIHVSRNVSLLPPHIDLEQSTCRGQDGVCVEVRACFSYTASPASYSPRLELQFVLEADSERRRRGQVPRVTFLGRGPADPEHQISGSLELPRQRERRCASATFRLHDDIRDKLRPIAVTLAFAIGGTRGWHRAGRGTALPPLSPALSPRQPSTHRAEVHFLRQGCGDDKICQSHLELRLRFCARVGDSDFLPLPRDEDGTAIFAMSDQKDVALEVQVTNEPSDPLDPQKDGDDAHQALLVATFPPELPYAALRPDEAGGLGVREQDKVLCLANQNGSRVECELGNPLKRGAQVRFFLILSTSGISIHTTDLAVELELSTTSEQPGLGPVVARARVVIELPLAVTGVAMPPRLFFGGQVLGESAVKRESQVGSAVRFEVTVSQRGPVLKTPGSAALTVQWPLELPNGKWLLYPLSLELGTPPVPCSPPANPLRLTMESPAQGGPPEEPLARSWWVPAGRRKRNVTLDCARGTAHCRLFRCPLPSLERSELRARGRLWNGTFLEEFLDVENLELIVRAGVSVTSPHGNVVIKDAEVQMSVSLHLDPGVSVTGVPWWVLLLAALLGLLLLALLVLGLWKRHERGLAHTQDGATR
SIO_010081: ITGA7
subclass of: SO_0000673
so part of: ITGA7
location: complement(join(538992..539039,540660..540782,541375..541473,541555..541665,542072..542161,542426..542593,543307..543409,543507..543584,544153..544232,544314..544394,544676..544886,545070..545182,545452..545604,545887..546056,546525..546586,546680..546775,547095..547222,547298..547386,547937..548130,548640..548847,550115..550234,550345..550476,550725..550980,551080..551159,551232..551359,552806..552996))
location: region:538992-552996:-1
so has part: feature:552806-552996:-1:exon
so has part: feature:551232-551359:-1:exon
so has part: feature:551080-551159:-1:exon
so has part: feature:550725-550980:-1:exon
so has part: feature:550345-550476:-1:exon
so has part: feature:550115-550234:-1:exon
so has part: feature:548640-548847:-1:exon
so has part: feature:547937-548130:-1:exon
so has part: feature:547298-547386:-1:exon
so has part: feature:547095-547222:-1:exon
so has part: feature:546680-546775:-1:exon
so has part: feature:546525-546586:-1:exon
so has part: feature:545887-546056:-1:exon
so has part: feature:545452-545604:-1:exon
so has part: feature:545070-545182:-1:exon
so has part: feature:544676-544886:-1:exon
so has part: feature:544314-544394:-1:exon
so has part: feature:544153-544232:-1:exon
so has part: feature:543507-543584:-1:exon
so has part: feature:543307-543409:-1:exon
so has part: feature:542426-542593:-1:exon
so has part: feature:542072-542161:-1:exon
so has part: feature:541555-541665:-1:exon
so has part: feature:541375-541473:-1:exon
so has part: feature:540660-540782:-1:exon
so has part: feature:538992-539039:-1:exon

XP_058279781.1
type: Protein
SIO_000068: ncbiprotein

position:538992:-1
position: 538992
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:552996:-1
position: 552996
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:552806-552996:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:551232-551359:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:551080-551159:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:550725-550980:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:550345-550476:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:550115-550234:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:548640-548847:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:547937-548130:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:547298-547386:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:547095-547222:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:546680-546775:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:546525-546586:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:545887-546056:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:545452-545604:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:545070-545182:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:544676-544886:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:544314-544394:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:544153-544232:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:543507-543584:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:543307-543409:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:542426-542593:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:542072-542161:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:541555-541665:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:541375-541473:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:540660-540782:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:538992-539039:-1:exon

ITGA7
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 43150
gene: ITGA7
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: integrin alpha-7 isoform X6
translation: MAGSGCRWLPRPALWLPWLALWLPAAAAFNLDGSSPVLKDGERGSLFGAAVALHRQLSPEPAGWLLVGAPQALALPGQGANRTGGLFACPLTPELSDCWRVPIDEGADPQRESKENQWLGVSVKSQGPGGKIVTCAHRYEVRHRVRQPLETRDVIGRCFVLSQDLSVRDELDGGEWKFCEGRPQGHERFGTCQQGLAAAFSPDRRYVLLGAPGTYNWKGTLRVEQLNQSSLDLLRLDAGPFEAGGEKDQDPSLIPVPANSYFGLLFVTNIESAAPDQRVFRTPQPGERVPGAAADVAHNSYLGFSVDSGAGLTRRQQLSFVTGAPRANHTGAVVILRRDSANRLVAEAVLAGHQLTSAFGHAVAVLDLNSDGWMDLAVGAPHFFERQEEIGGAVYVYINPGGLWDSATPLRLNGSRGSMFGAALSSAGDLNHDGFEDLAVGAPFDGAGKVFIYHGSALGIVTSPAQVLDGEAVGVSAFGYSLSGGLDVDGNLYPDLLVGSLSDTVVLYRARPVIHVSRNVSLLPPHIDLEQSTCRGQDGVCVEVRACFSYTASPASYSPRLELQFVLEADSERRRRGQVPRVTFLGRGPADPEHQISGSLELPRQRERRCASATFRLHDDIRDKLRPIAVTLAFAIGGTRGWHRAGRGTALPPLSPALSPRQPSTHRAEVHFLRQGCGDDKICQSHLELRLRFCARVGDSDFLPLPRDEDGTAIFAMSDQKDVALEVQVTNEPSDPLDPQKDGDDAHQALLVATFPPELPYAALRPDEAGGLGVREQDKVLCLANQNGSRVECELGNPLKRGAQVRFFLILSTSGISIHTTDLAVELELSTTSEQPGLGPVVARARVVIELPLAVTGVAMPPRLFFGGQVLGESAVKRESQVGSAVRFEVTVSQRGPVLKTPGSAALTVQWPLELPNGKWLLYPLSLELGTPPVPCSPPANPLRLTMESPAQGGPPEEPLARSWWVPAGRRKRNVTLDCARGTAHCRLFRCPLPSLERSELRARGRLWNGTFLEEFLDVENLELIVRAGVSVTSPHGNVVIKDAEVQMSVSLHLDPGVSVTGVPWWVLLLAALLGLLLLALLVLGLWKRV
SIO_010081: ITGA7
subclass of: SO_0000673
so part of: ITGA7
location: complement(join(539268..539276,540660..540782,541375..541473,541555..541665,542072..542161,542426..542593,543307..543409,543507..543584,544153..544232,544314..544394,544676..544886,545070..545182,545452..545604,545887..546056,546525..546586,546680..546775,547095..547222,547298..547386,547937..548130,548640..548847,550115..550234,550345..550476,550725..550980,551080..551159,551232..551359,552806..552996))
location: region:539268-552996:-1
so has part: feature:552806-552996:-1:exon
so has part: feature:551232-551359:-1:exon
so has part: feature:551080-551159:-1:exon
so has part: feature:550725-550980:-1:exon
so has part: feature:550345-550476:-1:exon
so has part: feature:550115-550234:-1:exon
so has part: feature:548640-548847:-1:exon
so has part: feature:547937-548130:-1:exon
so has part: feature:547298-547386:-1:exon
so has part: feature:547095-547222:-1:exon
so has part: feature:546680-546775:-1:exon
so has part: feature:546525-546586:-1:exon
so has part: feature:545887-546056:-1:exon
so has part: feature:545452-545604:-1:exon
so has part: feature:545070-545182:-1:exon
so has part: feature:544676-544886:-1:exon
so has part: feature:544314-544394:-1:exon
so has part: feature:544153-544232:-1:exon
so has part: feature:543507-543584:-1:exon
so has part: feature:543307-543409:-1:exon
so has part: feature:542426-542593:-1:exon
so has part: feature:542072-542161:-1:exon
so has part: feature:541555-541665:-1:exon
so has part: feature:541375-541473:-1:exon
so has part: feature:540660-540782:-1:exon
so has part: feature:539268-539276:-1:exon

XP_058279782.1
type: Protein
SIO_000068: ncbiprotein

position:539268:-1
position: 539268
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:552806-552996:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:551232-551359:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:551080-551159:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:550725-550980:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:550345-550476:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:550115-550234:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:548640-548847:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:547937-548130:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:547298-547386:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:547095-547222:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:546680-546775:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:546525-546586:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:545887-546056:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:545452-545604:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:545070-545182:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:544676-544886:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:544314-544394:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:544153-544232:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:543507-543584:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:543307-543409:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:542426-542593:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:542072-542161:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:541555-541665:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:541375-541473:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:540660-540782:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:539268-539276:-1:exon

ITGA7
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 43150
gene: ITGA7
product: integrin subunit alpha 7, transcript variant X4
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_058423797.1
SIO_010081: ITGA7
subclass of: SO_0000673
so part of: ITGA7
location: complement(join(539278..540494,540660..540782,541375..541473,541555..541665,542072..542161,542426..542593,543307..543409,543507..543584,544153..544232,544314..544394,544676..544886,545070..545182,545452..545604,545887..546056,546525..546586,546680..546775,547095..547222,547298..547386,547937..548130,548640..548847,550115..550234,550725..550980,551080..551159,551232..551359,552806..553036))
location: region:539278-553036:-1
so has part: feature:552806-553036:-1:exon
so has part: feature:551232-551359:-1:exon
so has part: feature:551080-551159:-1:exon
so has part: feature:550725-550980:-1:exon
so has part: feature:550115-550234:-1:exon
so has part: feature:548640-548847:-1:exon
so has part: feature:547937-548130:-1:exon
so has part: feature:547298-547386:-1:exon
so has part: feature:547095-547222:-1:exon
so has part: feature:546680-546775:-1:exon
so has part: feature:546525-546586:-1:exon
so has part: feature:545887-546056:-1:exon
so has part: feature:545452-545604:-1:exon
so has part: feature:545070-545182:-1:exon
so has part: feature:544676-544886:-1:exon
so has part: feature:544314-544394:-1:exon
so has part: feature:544153-544232:-1:exon
so has part: feature:543507-543584:-1:exon
so has part: feature:543307-543409:-1:exon
so has part: feature:542426-542593:-1:exon
so has part: feature:542072-542161:-1:exon
so has part: feature:541555-541665:-1:exon
so has part: feature:541375-541473:-1:exon
so has part: feature:540660-540782:-1:exon
so has part: feature:539278-540494:-1:exon

position:539278:-1
position: 539278
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:552806-553036:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:551232-551359:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:551080-551159:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:550725-550980:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:550115-550234:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:548640-548847:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:547937-548130:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:547298-547386:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:547095-547222:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:546680-546775:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:546525-546586:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:545887-546056:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:545452-545604:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:545070-545182:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:544676-544886:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:544314-544394:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:544153-544232:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:543507-543584:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:543307-543409:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:542426-542593:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:542072-542161:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:541555-541665:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:541375-541473:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:540660-540782:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:539278-540494:-1:exon

position:540494:-1
position: 540494
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

ITGA7
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 43150
gene: ITGA7
product: integrin subunit alpha 7, transcript variant X7
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_040088358.2
SIO_010081: ITGA7
subclass of: SO_0000673
so part of: ITGA7
location: complement(join(539278..540494,540660..540782,541375..541473,541555..541665,542072..542161,542426..542593,543307..543409,543507..543584,544153..544232,544314..544394,544688..544886,545070..545182,545452..545604,545887..546056,546525..546586,546680..546775,547095..547222,547298..547386,547937..548130,548640..548847,550345..550476,550725..550980,551080..551159,551232..551359,552806..553036))
location: region:539278-553036:-1
so has part: feature:552806-553036:-1:exon
so has part: feature:551232-551359:-1:exon
so has part: feature:551080-551159:-1:exon
so has part: feature:550725-550980:-1:exon
so has part: feature:550345-550476:-1:exon
so has part: feature:548640-548847:-1:exon
so has part: feature:547937-548130:-1:exon
so has part: feature:547298-547386:-1:exon
so has part: feature:547095-547222:-1:exon
so has part: feature:546680-546775:-1:exon
so has part: feature:546525-546586:-1:exon
so has part: feature:545887-546056:-1:exon
so has part: feature:545452-545604:-1:exon
so has part: feature:545070-545182:-1:exon
so has part: feature:544688-544886:-1:exon
so has part: feature:544314-544394:-1:exon
so has part: feature:544153-544232:-1:exon
so has part: feature:543507-543584:-1:exon
so has part: feature:543307-543409:-1:exon
so has part: feature:542426-542593:-1:exon
so has part: feature:542072-542161:-1:exon
so has part: feature:541555-541665:-1:exon
so has part: feature:541375-541473:-1:exon
so has part: feature:540660-540782:-1:exon
so has part: feature:539278-540494:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:552806-553036:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:551232-551359:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:551080-551159:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:550725-550980:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:550345-550476:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:548640-548847:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:547937-548130:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:547298-547386:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:547095-547222:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:546680-546775:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:546525-546586:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:545887-546056:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:545452-545604:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:545070-545182:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:544688-544886:-1:exon

position:544688:-1
position: 544688
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:544314-544394:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:544153-544232:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:543507-543584:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:543307-543409:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:542426-542593:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:542072-542161:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:541555-541665:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:541375-541473:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:540660-540782:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:539278-540494:-1:exon

ITGA7
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 43150
gene: ITGA7
product: integrin subunit alpha 7, transcript variant X3
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_058423796.1
SIO_010081: ITGA7
subclass of: SO_0000673
so part of: ITGA7
location: complement(join(539278..540494,540660..540782,541375..541473,541555..541665,542072..542161,542426..542593,543307..543409,543507..543584,544153..544232,544314..544394,544676..544886,545070..545182,545452..545604,545887..546056,546525..546586,546680..546775,547095..547222,547298..547386,547937..548130,548640..548847,550345..550476,550725..550980,551080..551159,551232..551359,552806..553036))
location: region:539278-553036:-1
so has part: feature:552806-553036:-1:exon
so has part: feature:551232-551359:-1:exon
so has part: feature:551080-551159:-1:exon
so has part: feature:550725-550980:-1:exon
so has part: feature:550345-550476:-1:exon
so has part: feature:548640-548847:-1:exon
so has part: feature:547937-548130:-1:exon
so has part: feature:547298-547386:-1:exon
so has part: feature:547095-547222:-1:exon
so has part: feature:546680-546775:-1:exon
so has part: feature:546525-546586:-1:exon
so has part: feature:545887-546056:-1:exon
so has part: feature:545452-545604:-1:exon
so has part: feature:545070-545182:-1:exon
so has part: feature:544676-544886:-1:exon
so has part: feature:544314-544394:-1:exon
so has part: feature:544153-544232:-1:exon
so has part: feature:543507-543584:-1:exon
so has part: feature:543307-543409:-1:exon
so has part: feature:542426-542593:-1:exon
so has part: feature:542072-542161:-1:exon
so has part: feature:541555-541665:-1:exon
so has part: feature:541375-541473:-1:exon
so has part: feature:540660-540782:-1:exon
so has part: feature:539278-540494:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:552806-553036:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:551232-551359:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:551080-551159:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:550725-550980:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:550345-550476:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:548640-548847:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:547937-548130:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:547298-547386:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:547095-547222:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:546680-546775:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:546525-546586:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:545887-546056:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:545452-545604:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:545070-545182:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:544676-544886:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:544314-544394:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:544153-544232:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:543507-543584:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:543307-543409:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:542426-542593:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:542072-542161:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:541555-541665:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:541375-541473:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:540660-540782:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:539278-540494:-1:exon

ITGA7
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 43150
gene: ITGA7
product: integrin subunit alpha 7, transcript variant X2
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_040088357.2
SIO_010081: ITGA7
subclass of: SO_0000673
so part of: ITGA7
location: complement(join(539278..540494,540660..540782,541375..541473,541555..541665,542072..542161,542426..542593,543307..543409,543507..543584,544153..544232,544314..544394,544688..544886,545070..545182,545452..545604,545887..546056,546525..546586,546680..546775,547095..547222,547298..547386,547937..548130,548640..548847,550115..550234,550345..550476,550725..550980,551080..551159,551232..551359,552806..553036))
location: region:539278-553036:-1
so has part: feature:552806-553036:-1:exon
so has part: feature:551232-551359:-1:exon
so has part: feature:551080-551159:-1:exon
so has part: feature:550725-550980:-1:exon
so has part: feature:550345-550476:-1:exon
so has part: feature:550115-550234:-1:exon
so has part: feature:548640-548847:-1:exon
so has part: feature:547937-548130:-1:exon
so has part: feature:547298-547386:-1:exon
so has part: feature:547095-547222:-1:exon
so has part: feature:546680-546775:-1:exon
so has part: feature:546525-546586:-1:exon
so has part: feature:545887-546056:-1:exon
so has part: feature:545452-545604:-1:exon
so has part: feature:545070-545182:-1:exon
so has part: feature:544688-544886:-1:exon
so has part: feature:544314-544394:-1:exon
so has part: feature:544153-544232:-1:exon
so has part: feature:543507-543584:-1:exon
so has part: feature:543307-543409:-1:exon
so has part: feature:542426-542593:-1:exon
so has part: feature:542072-542161:-1:exon
so has part: feature:541555-541665:-1:exon
so has part: feature:541375-541473:-1:exon
so has part: feature:540660-540782:-1:exon
so has part: feature:539278-540494:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:552806-553036:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:551232-551359:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:551080-551159:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:550725-550980:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:550345-550476:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:550115-550234:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:548640-548847:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:547937-548130:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:547298-547386:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:547095-547222:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:546680-546775:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:546525-546586:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:545887-546056:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:545452-545604:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:545070-545182:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:544688-544886:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:544314-544394:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:544153-544232:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:543507-543584:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:543307-543409:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:542426-542593:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:542072-542161:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:541555-541665:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:541375-541473:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:540660-540782:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:539278-540494:-1:exon

ITGA7
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 43150
gene: ITGA7
product: integrin subunit alpha 7, transcript variant X1
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_058423795.1
SIO_010081: ITGA7
subclass of: SO_0000673
so part of: ITGA7
location: complement(join(539278..540494,540660..540782,541375..541473,541555..541665,542072..542161,542426..542593,543307..543409,543507..543584,544153..544232,544314..544394,544676..544886,545070..545182,545452..545604,545887..546056,546525..546586,546680..546775,547095..547222,547298..547386,547937..548130,548640..548847,550115..550234,550345..550476,550725..550980,551080..551159,551232..551359,552806..553036))
location: region:539278-553036:-1
so has part: feature:552806-553036:-1:exon
so has part: feature:551232-551359:-1:exon
so has part: feature:551080-551159:-1:exon
so has part: feature:550725-550980:-1:exon
so has part: feature:550345-550476:-1:exon
so has part: feature:550115-550234:-1:exon
so has part: feature:548640-548847:-1:exon
so has part: feature:547937-548130:-1:exon
so has part: feature:547298-547386:-1:exon
so has part: feature:547095-547222:-1:exon
so has part: feature:546680-546775:-1:exon
so has part: feature:546525-546586:-1:exon
so has part: feature:545887-546056:-1:exon
so has part: feature:545452-545604:-1:exon
so has part: feature:545070-545182:-1:exon
so has part: feature:544676-544886:-1:exon
so has part: feature:544314-544394:-1:exon
so has part: feature:544153-544232:-1:exon
so has part: feature:543507-543584:-1:exon
so has part: feature:543307-543409:-1:exon
so has part: feature:542426-542593:-1:exon
so has part: feature:542072-542161:-1:exon
so has part: feature:541555-541665:-1:exon
so has part: feature:541375-541473:-1:exon
so has part: feature:540660-540782:-1:exon
so has part: feature:539278-540494:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:552806-553036:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:551232-551359:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:551080-551159:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:550725-550980:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:550345-550476:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:550115-550234:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:548640-548847:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:547937-548130:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:547298-547386:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:547095-547222:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:546680-546775:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:546525-546586:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:545887-546056:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:545452-545604:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:545070-545182:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:544676-544886:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:544314-544394:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:544153-544232:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:543507-543584:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:543307-543409:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:542426-542593:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:542072-542161:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:541555-541665:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:541375-541473:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:540660-540782:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:539278-540494:-1:exon

ITGA7
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 43150
gene: ITGA7
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: integrin alpha-7 isoform X4
translation: MAGSGCRWLPRPALWLPWLALWLPAAAAFNLDGSSPVLKDGERGSLFGAAVALHRQLSPEPAGWLLVGAPQALALPGQGANRTGGLFACPLTPELSDCWRVPIDEGADPQRESKENQWLGVSVKSQGPGGKIVTCAHRYEVRHRVRQPLETRDVIGRCFVLSQDLSVRDELDGGEWKFCEGRPQGHERFGTCQQGLAAAFSPDRRYVLLGAPGTYNWKGLLFVTNIESAAPDQRVFRTPQPGERVPGAAADVAHNSYLGFSVDSGAGLTRRQQLSFVTGAPRANHTGAVVILRRDSANRLVAEAVLAGHQLTSAFGHAVAVLDLNSDGWMDLAVGAPHFFERQEEIGGAVYVYINPGGLWDSATPLRLNGSRGSMFGAALSSAGDLNHDGFEDLAVGAPFDGAGKVFIYHGSALGIVTSPAQVLDGEAVGVSAFGYSLSGGLDVDGNLYPDLLVGSLSDTVVLYRARPVIHVSRNVSLLPPHIDLEQSTCRGQDGVCVEVRACFSYTASPASYSPRLELQFVLEADSERRRRGQVPRVTFLGRGPADPEHQISGSLELPRQRERRCASATFRLHDDIRDKLRPIAVTLAFAIGGTRGWHRAGRGTALPPLSPALSPRQPSTHRAEVHFLRQGCGDDKICQSHLELRLRFCARVGDSDFLPLPRDEDGTAIFAMSDQKDVALEVQVTNEPSDPLDPQKDGDDAHQALLVATFPPELPYAALRPDEAGGLGVREQDKVLCLANQNGSRVECELGNPLKRGAQVRFFLILSTSGISIHTTDLAVELELSTTSEQPGLGPVVARARVVIELPLAVTGVAMPPRLFFGGQVLGESAVKRESQVGSAVRFEVTVSQRGPVLKTPGSAALTVQWPLELPNGKWLLYPLSLELGTPPVPCSPPANPLRLTMESPAQGGPPEEPLARSWWVPAGRRKRNVTLDCARGTAHCRLFRCPLPSLERSELRARGRLWNGTFLEEFLDVENLELIVRAGVSVTSPHGNVVIKDAEVQMSVSLHLDPGVSVTGVPWWVLLLAALLGLLLLALLVLGLWKLGFFRRARAVPPAVPRFRAVRIPWEQRPQAREERTGTIQRHQWVAGPGHQHGDNLGDGSRTPGSA
SIO_010081: ITGA7
subclass of: SO_0000673
so part of: ITGA7
location: complement(join(540297..540494,540660..540782,541375..541473,541555..541665,542072..542161,542426..542593,543307..543409,543507..543584,544153..544232,544314..544394,544676..544886,545070..545182,545452..545604,545887..546056,546525..546586,546680..546775,547095..547222,547298..547386,547937..548130,548640..548847,550115..550234,550725..550980,551080..551159,551232..551359,552806..552996))
location: region:540297-552996:-1
so has part: feature:552806-552996:-1:exon
so has part: feature:551232-551359:-1:exon
so has part: feature:551080-551159:-1:exon
so has part: feature:550725-550980:-1:exon
so has part: feature:550115-550234:-1:exon
so has part: feature:548640-548847:-1:exon
so has part: feature:547937-548130:-1:exon
so has part: feature:547298-547386:-1:exon
so has part: feature:547095-547222:-1:exon
so has part: feature:546680-546775:-1:exon
so has part: feature:546525-546586:-1:exon
so has part: feature:545887-546056:-1:exon
so has part: feature:545452-545604:-1:exon
so has part: feature:545070-545182:-1:exon
so has part: feature:544676-544886:-1:exon
so has part: feature:544314-544394:-1:exon
so has part: feature:544153-544232:-1:exon
so has part: feature:543507-543584:-1:exon
so has part: feature:543307-543409:-1:exon
so has part: feature:542426-542593:-1:exon
so has part: feature:542072-542161:-1:exon
so has part: feature:541555-541665:-1:exon
so has part: feature:541375-541473:-1:exon
so has part: feature:540660-540782:-1:exon
so has part: feature:540297-540494:-1:exon

XP_058279780.1
type: Protein
SIO_000068: ncbiprotein

position:540297:-1
position: 540297
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:552806-552996:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:551232-551359:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:551080-551159:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:550725-550980:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:550115-550234:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:548640-548847:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:547937-548130:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:547298-547386:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:547095-547222:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:546680-546775:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:546525-546586:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:545887-546056:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:545452-545604:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:545070-545182:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:544676-544886:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:544314-544394:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:544153-544232:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:543507-543584:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:543307-543409:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:542426-542593:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:542072-542161:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:541555-541665:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:541375-541473:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:540660-540782:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:540297-540494:-1:exon

ITGA7
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 43150
gene: ITGA7
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: integrin alpha-7 isoform X7
translation: MAGSGCRWLPRPALWLPWLALWLPAAAAFNLDGSSPVLKDGERGSLFGAAVALHRQLSPEPAGWLLVGAPQALALPGQGANRTGGLFACPLTPELSDCWRVPIDEGADPQRESKENQWLGVSVKSQGPGGKIVTCAHRYEVRHRVRQPLETRDVIGRCFVLSQDLSVRDELDGGEWKFCEGRPQGHERFGTCQQGLAAAFSPDRRYVLLGAPGTYNWKGTLRVEQLNQSSLDLLRLDAGPFEAGGEKDQDPSLIPVPANSYFGFSVDSGAGLTRRQQLSFVTGAPRANHTGAVVILRRDSANRLVAEAVLAGHQLTSAFGHAVAVLDLNSDGWMDLAVGAPHFFERQEEIGGAVYVYINPGGLWDSATPLRLNGSRGSMFGAALSSAGDLNHDGFEDLAVGAPFDGAGKVFIYHGSALGIVTSPAQVLDGEAVGVSAFGYSLSGGLDVDGNLYPDLLVGSLSDTVVLYRARPVIHVSRNVSLLPPHIDLEQSTCRGQDGVCVEVRACFSYTASPASYSPRLELQFVLEADSERRRRGQVPRVTFLGRGPADPEHQISGSLELPRQRERRCASATFRLHDDIRDKLRPIAVTLAFAIGGTRGWHRAGRGTALPPLSPALSPRQPSTHRAEVHFLRQGCGDDKICQSHLELRLRFCARVGDSDFLPLPRDEDGTAIFAMSDQKDVALEVQVTNEPSDPLDPQKDGDDAHQALLVATFPPELPYAALRPDEAGGLGDKVLCLANQNGSRVECELGNPLKRGAQVRFFLILSTSGISIHTTDLAVELELSTTSEQPGLGPVVARARVVIELPLAVTGVAMPPRLFFGGQVLGESAVKRESQVGSAVRFEVTVSQRGPVLKTPGSAALTVQWPLELPNGKWLLYPLSLELGTPPVPCSPPANPLRLTMESPAQGGPPEEPLARSWWVPAGRRKRNVTLDCARGTAHCRLFRCPLPSLERSELRARGRLWNGTFLEEFLDVENLELIVRAGVSVTSPHGNVVIKDAEVQMSVSLHLDPGVSVTGVPWWVLLLAALLGLLLLALLVLGLWKLGFFRRARAVPPAVPRFRAVRIPWEQRPQAREERTGTIQRHQWVAGPGHQHGDNLGDGSRTPGSA
SIO_010081: ITGA7
subclass of: SO_0000673
so part of: ITGA7
location: complement(join(540297..540494,540660..540782,541375..541473,541555..541665,542072..542161,542426..542593,543307..543409,543507..543584,544153..544232,544314..544394,544688..544886,545070..545182,545452..545604,545887..546056,546525..546586,546680..546775,547095..547222,547298..547386,547937..548130,548640..548847,550345..550476,550725..550980,551080..551159,551232..551359,552806..552996))
location: region:540297-552996:-1
so has part: feature:552806-552996:-1:exon
so has part: feature:551232-551359:-1:exon
so has part: feature:551080-551159:-1:exon
so has part: feature:550725-550980:-1:exon
so has part: feature:550345-550476:-1:exon
so has part: feature:548640-548847:-1:exon
so has part: feature:547937-548130:-1:exon
so has part: feature:547298-547386:-1:exon
so has part: feature:547095-547222:-1:exon
so has part: feature:546680-546775:-1:exon
so has part: feature:546525-546586:-1:exon
so has part: feature:545887-546056:-1:exon
so has part: feature:545452-545604:-1:exon
so has part: feature:545070-545182:-1:exon
so has part: feature:544688-544886:-1:exon
so has part: feature:544314-544394:-1:exon
so has part: feature:544153-544232:-1:exon
so has part: feature:543507-543584:-1:exon
so has part: feature:543307-543409:-1:exon
so has part: feature:542426-542593:-1:exon
so has part: feature:542072-542161:-1:exon
so has part: feature:541555-541665:-1:exon
so has part: feature:541375-541473:-1:exon
so has part: feature:540660-540782:-1:exon
so has part: feature:540297-540494:-1:exon

XP_039944292.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:552806-552996:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:551232-551359:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:551080-551159:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:550725-550980:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:550345-550476:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:548640-548847:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:547937-548130:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:547298-547386:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:547095-547222:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:546680-546775:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:546525-546586:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:545887-546056:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:545452-545604:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:545070-545182:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:544688-544886:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:544314-544394:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:544153-544232:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:543507-543584:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:543307-543409:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:542426-542593:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:542072-542161:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:541555-541665:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:541375-541473:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:540660-540782:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:540297-540494:-1:exon

ITGA7
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 43150
gene: ITGA7
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: integrin alpha-7 isoform X3
translation: MAGSGCRWLPRPALWLPWLALWLPAAAAFNLDGSSPVLKDGERGSLFGAAVALHRQLSPEPAGWLLVGAPQALALPGQGANRTGGLFACPLTPELSDCWRVPIDEGADPQRESKENQWLGVSVKSQGPGGKIVTCAHRYEVRHRVRQPLETRDVIGRCFVLSQDLSVRDELDGGEWKFCEGRPQGHERFGTCQQGLAAAFSPDRRYVLLGAPGTYNWKGTLRVEQLNQSSLDLLRLDAGPFEAGGEKDQDPSLIPVPANSYFGFSVDSGAGLTRRQQLSFVTGAPRANHTGAVVILRRDSANRLVAEAVLAGHQLTSAFGHAVAVLDLNSDGWMDLAVGAPHFFERQEEIGGAVYVYINPGGLWDSATPLRLNGSRGSMFGAALSSAGDLNHDGFEDLAVGAPFDGAGKVFIYHGSALGIVTSPAQVLDGEAVGVSAFGYSLSGGLDVDGNLYPDLLVGSLSDTVVLYRARPVIHVSRNVSLLPPHIDLEQSTCRGQDGVCVEVRACFSYTASPASYSPRLELQFVLEADSERRRRGQVPRVTFLGRGPADPEHQISGSLELPRQRERRCASATFRLHDDIRDKLRPIAVTLAFAIGGTRGWHRAGRGTALPPLSPALSPRQPSTHRAEVHFLRQGCGDDKICQSHLELRLRFCARVGDSDFLPLPRDEDGTAIFAMSDQKDVALEVQVTNEPSDPLDPQKDGDDAHQALLVATFPPELPYAALRPDEAGGLGVREQDKVLCLANQNGSRVECELGNPLKRGAQVRFFLILSTSGISIHTTDLAVELELSTTSEQPGLGPVVARARVVIELPLAVTGVAMPPRLFFGGQVLGESAVKRESQVGSAVRFEVTVSQRGPVLKTPGSAALTVQWPLELPNGKWLLYPLSLELGTPPVPCSPPANPLRLTMESPAQGGPPEEPLARSWWVPAGRRKRNVTLDCARGTAHCRLFRCPLPSLERSELRARGRLWNGTFLEEFLDVENLELIVRAGVSVTSPHGNVVIKDAEVQMSVSLHLDPGVSVTGVPWWVLLLAALLGLLLLALLVLGLWKLGFFRRARAVPPAVPRFRAVRIPWEQRPQAREERTGTIQRHQWVAGPGHQHGDNLGDGSRTPGSA
SIO_010081: ITGA7
subclass of: SO_0000673
so part of: ITGA7
location: complement(join(540297..540494,540660..540782,541375..541473,541555..541665,542072..542161,542426..542593,543307..543409,543507..543584,544153..544232,544314..544394,544676..544886,545070..545182,545452..545604,545887..546056,546525..546586,546680..546775,547095..547222,547298..547386,547937..548130,548640..548847,550345..550476,550725..550980,551080..551159,551232..551359,552806..552996))
location: region:540297-552996:-1
so has part: feature:552806-552996:-1:exon
so has part: feature:551232-551359:-1:exon
so has part: feature:551080-551159:-1:exon
so has part: feature:550725-550980:-1:exon
so has part: feature:550345-550476:-1:exon
so has part: feature:548640-548847:-1:exon
so has part: feature:547937-548130:-1:exon
so has part: feature:547298-547386:-1:exon
so has part: feature:547095-547222:-1:exon
so has part: feature:546680-546775:-1:exon
so has part: feature:546525-546586:-1:exon
so has part: feature:545887-546056:-1:exon
so has part: feature:545452-545604:-1:exon
so has part: feature:545070-545182:-1:exon
so has part: feature:544676-544886:-1:exon
so has part: feature:544314-544394:-1:exon
so has part: feature:544153-544232:-1:exon
so has part: feature:543507-543584:-1:exon
so has part: feature:543307-543409:-1:exon
so has part: feature:542426-542593:-1:exon
so has part: feature:542072-542161:-1:exon
so has part: feature:541555-541665:-1:exon
so has part: feature:541375-541473:-1:exon
so has part: feature:540660-540782:-1:exon
so has part: feature:540297-540494:-1:exon

XP_058279779.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:552806-552996:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:551232-551359:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:551080-551159:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:550725-550980:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:550345-550476:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:548640-548847:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:547937-548130:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:547298-547386:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:547095-547222:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:546680-546775:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:546525-546586:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:545887-546056:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:545452-545604:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:545070-545182:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:544676-544886:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:544314-544394:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:544153-544232:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:543507-543584:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:543307-543409:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:542426-542593:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:542072-542161:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:541555-541665:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:541375-541473:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:540660-540782:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:540297-540494:-1:exon

ITGA7
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 43150
gene: ITGA7
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: integrin alpha-7 isoform X2
translation: MAGSGCRWLPRPALWLPWLALWLPAAAAFNLDGSSPVLKDGERGSLFGAAVALHRQLSPEPAGWLLVGAPQALALPGQGANRTGGLFACPLTPELSDCWRVPIDEGADPQRESKENQWLGVSVKSQGPGGKIVTCAHRYEVRHRVRQPLETRDVIGRCFVLSQDLSVRDELDGGEWKFCEGRPQGHERFGTCQQGLAAAFSPDRRYVLLGAPGTYNWKGTLRVEQLNQSSLDLLRLDAGPFEAGGEKDQDPSLIPVPANSYFGLLFVTNIESAAPDQRVFRTPQPGERVPGAAADVAHNSYLGFSVDSGAGLTRRQQLSFVTGAPRANHTGAVVILRRDSANRLVAEAVLAGHQLTSAFGHAVAVLDLNSDGWMDLAVGAPHFFERQEEIGGAVYVYINPGGLWDSATPLRLNGSRGSMFGAALSSAGDLNHDGFEDLAVGAPFDGAGKVFIYHGSALGIVTSPAQVLDGEAVGVSAFGYSLSGGLDVDGNLYPDLLVGSLSDTVVLYRARPVIHVSRNVSLLPPHIDLEQSTCRGQDGVCVEVRACFSYTASPASYSPRLELQFVLEADSERRRRGQVPRVTFLGRGPADPEHQISGSLELPRQRERRCASATFRLHDDIRDKLRPIAVTLAFAIGGTRGWHRAGRGTALPPLSPALSPRQPSTHRAEVHFLRQGCGDDKICQSHLELRLRFCARVGDSDFLPLPRDEDGTAIFAMSDQKDVALEVQVTNEPSDPLDPQKDGDDAHQALLVATFPPELPYAALRPDEAGGLGDKVLCLANQNGSRVECELGNPLKRGAQVRFFLILSTSGISIHTTDLAVELELSTTSEQPGLGPVVARARVVIELPLAVTGVAMPPRLFFGGQVLGESAVKRESQVGSAVRFEVTVSQRGPVLKTPGSAALTVQWPLELPNGKWLLYPLSLELGTPPVPCSPPANPLRLTMESPAQGGPPEEPLARSWWVPAGRRKRNVTLDCARGTAHCRLFRCPLPSLERSELRARGRLWNGTFLEEFLDVENLELIVRAGVSVTSPHGNVVIKDAEVQMSVSLHLDPGVSVTGVPWWVLLLAALLGLLLLALLVLGLWKLGFFRRARAVPPAVPRFRAVRIPWEQRPQAREERTGTIQRHQWVAGPGHQHGDNLGDGSRTPGSA
SIO_010081: ITGA7
subclass of: SO_0000673
so part of: ITGA7
location: complement(join(540297..540494,540660..540782,541375..541473,541555..541665,542072..542161,542426..542593,543307..543409,543507..543584,544153..544232,544314..544394,544688..544886,545070..545182,545452..545604,545887..546056,546525..546586,546680..546775,547095..547222,547298..547386,547937..548130,548640..548847,550115..550234,550345..550476,550725..550980,551080..551159,551232..551359,552806..552996))
location: region:540297-552996:-1
so has part: feature:552806-552996:-1:exon
so has part: feature:551232-551359:-1:exon
so has part: feature:551080-551159:-1:exon
so has part: feature:550725-550980:-1:exon
so has part: feature:550345-550476:-1:exon
so has part: feature:550115-550234:-1:exon
so has part: feature:548640-548847:-1:exon
so has part: feature:547937-548130:-1:exon
so has part: feature:547298-547386:-1:exon
so has part: feature:547095-547222:-1:exon
so has part: feature:546680-546775:-1:exon
so has part: feature:546525-546586:-1:exon
so has part: feature:545887-546056:-1:exon
so has part: feature:545452-545604:-1:exon
so has part: feature:545070-545182:-1:exon
so has part: feature:544688-544886:-1:exon
so has part: feature:544314-544394:-1:exon
so has part: feature:544153-544232:-1:exon
so has part: feature:543507-543584:-1:exon
so has part: feature:543307-543409:-1:exon
so has part: feature:542426-542593:-1:exon
so has part: feature:542072-542161:-1:exon
so has part: feature:541555-541665:-1:exon
so has part: feature:541375-541473:-1:exon
so has part: feature:540660-540782:-1:exon
so has part: feature:540297-540494:-1:exon

XP_039944291.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:552806-552996:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:551232-551359:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:551080-551159:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:550725-550980:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:550345-550476:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:550115-550234:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:548640-548847:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:547937-548130:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:547298-547386:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:547095-547222:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:546680-546775:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:546525-546586:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:545887-546056:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:545452-545604:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:545070-545182:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:544688-544886:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:544314-544394:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:544153-544232:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:543507-543584:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:543307-543409:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:542426-542593:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:542072-542161:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:541555-541665:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:541375-541473:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:540660-540782:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:540297-540494:-1:exon

ITGA7
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 43150
gene: ITGA7
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: integrin alpha-7 isoform X1
translation: MAGSGCRWLPRPALWLPWLALWLPAAAAFNLDGSSPVLKDGERGSLFGAAVALHRQLSPEPAGWLLVGAPQALALPGQGANRTGGLFACPLTPELSDCWRVPIDEGADPQRESKENQWLGVSVKSQGPGGKIVTCAHRYEVRHRVRQPLETRDVIGRCFVLSQDLSVRDELDGGEWKFCEGRPQGHERFGTCQQGLAAAFSPDRRYVLLGAPGTYNWKGTLRVEQLNQSSLDLLRLDAGPFEAGGEKDQDPSLIPVPANSYFGLLFVTNIESAAPDQRVFRTPQPGERVPGAAADVAHNSYLGFSVDSGAGLTRRQQLSFVTGAPRANHTGAVVILRRDSANRLVAEAVLAGHQLTSAFGHAVAVLDLNSDGWMDLAVGAPHFFERQEEIGGAVYVYINPGGLWDSATPLRLNGSRGSMFGAALSSAGDLNHDGFEDLAVGAPFDGAGKVFIYHGSALGIVTSPAQVLDGEAVGVSAFGYSLSGGLDVDGNLYPDLLVGSLSDTVVLYRARPVIHVSRNVSLLPPHIDLEQSTCRGQDGVCVEVRACFSYTASPASYSPRLELQFVLEADSERRRRGQVPRVTFLGRGPADPEHQISGSLELPRQRERRCASATFRLHDDIRDKLRPIAVTLAFAIGGTRGWHRAGRGTALPPLSPALSPRQPSTHRAEVHFLRQGCGDDKICQSHLELRLRFCARVGDSDFLPLPRDEDGTAIFAMSDQKDVALEVQVTNEPSDPLDPQKDGDDAHQALLVATFPPELPYAALRPDEAGGLGVREQDKVLCLANQNGSRVECELGNPLKRGAQVRFFLILSTSGISIHTTDLAVELELSTTSEQPGLGPVVARARVVIELPLAVTGVAMPPRLFFGGQVLGESAVKRESQVGSAVRFEVTVSQRGPVLKTPGSAALTVQWPLELPNGKWLLYPLSLELGTPPVPCSPPANPLRLTMESPAQGGPPEEPLARSWWVPAGRRKRNVTLDCARGTAHCRLFRCPLPSLERSELRARGRLWNGTFLEEFLDVENLELIVRAGVSVTSPHGNVVIKDAEVQMSVSLHLDPGVSVTGVPWWVLLLAALLGLLLLALLVLGLWKLGFFRRARAVPPAVPRFRAVRIPWEQRPQAREERTGTIQRHQWVAGPGHQHGDNLGDGSRTPGSA
SIO_010081: ITGA7
subclass of: SO_0000673
so part of: ITGA7
location: complement(join(540297..540494,540660..540782,541375..541473,541555..541665,542072..542161,542426..542593,543307..543409,543507..543584,544153..544232,544314..544394,544676..544886,545070..545182,545452..545604,545887..546056,546525..546586,546680..546775,547095..547222,547298..547386,547937..548130,548640..548847,550115..550234,550345..550476,550725..550980,551080..551159,551232..551359,552806..552996))
location: region:540297-552996:-1
so has part: feature:552806-552996:-1:exon
so has part: feature:551232-551359:-1:exon
so has part: feature:551080-551159:-1:exon
so has part: feature:550725-550980:-1:exon
so has part: feature:550345-550476:-1:exon
so has part: feature:550115-550234:-1:exon
so has part: feature:548640-548847:-1:exon
so has part: feature:547937-548130:-1:exon
so has part: feature:547298-547386:-1:exon
so has part: feature:547095-547222:-1:exon
so has part: feature:546680-546775:-1:exon
so has part: feature:546525-546586:-1:exon
so has part: feature:545887-546056:-1:exon
so has part: feature:545452-545604:-1:exon
so has part: feature:545070-545182:-1:exon
so has part: feature:544676-544886:-1:exon
so has part: feature:544314-544394:-1:exon
so has part: feature:544153-544232:-1:exon
so has part: feature:543507-543584:-1:exon
so has part: feature:543307-543409:-1:exon
so has part: feature:542426-542593:-1:exon
so has part: feature:542072-542161:-1:exon
so has part: feature:541555-541665:-1:exon
so has part: feature:541375-541473:-1:exon
so has part: feature:540660-540782:-1:exon
so has part: feature:540297-540494:-1:exon

XP_058279778.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:552806-552996:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:551232-551359:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:551080-551159:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:550725-550980:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:550345-550476:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:550115-550234:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:548640-548847:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:547937-548130:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:547298-547386:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:547095-547222:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:546680-546775:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:546525-546586:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:545887-546056:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:545452-545604:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:545070-545182:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:544676-544886:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:544314-544394:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:544153-544232:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:543507-543584:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:543307-543409:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:542426-542593:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:542072-542161:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:541555-541665:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:541375-541473:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:540660-540782:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:540297-540494:-1:exon

BLOC1S1
type: Gene
subclass of: SO_0000704
RO_0002162: 43150
gene: BLOC1S1
note: biogenesis of lysosomal organelles complex 1 subunit 1; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 555802..557963
location: region:555802-557963:1
so has part: feature:555802-557963:1:exon
subclass of: SO_0000010

120764496
type: Gene
SIO_000068: ncbigene

position:555802:1
position: 555802
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:557963:1
position: 557963
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:555802-557963:1:exon

BLOC1S1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 43150
gene: BLOC1S1
product: biogenesis of lysosomal organelles complex 1 subunit 1
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_040088484.2
SIO_010081: BLOC1S1
subclass of: SO_0000673
so part of: BLOC1S1
location: join(555802..555898,556200..556272,556944..557076,557640..557963)
location: region:555802-557963:1
so has part: feature:555802-555898:1:exon
so has part: feature:556200-556272:1:exon
so has part: feature:556944-557076:1:exon
so has part: feature:557640-557963:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:555802-555898:1:exon

position:555898:1
position: 555898
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:556200-556272:1:exon

position:556200:1
position: 556200
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:556272:1
position: 556272
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:556944-557076:1:exon

position:556944:1
position: 556944
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:557076:1
position: 557076
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:557640-557963:1:exon

position:557640:1
position: 557640
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

BLOC1S1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 43150
gene: BLOC1S1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: biogenesis of lysosome-related organelles complex 1 subunit 1
translation: MLSRLLKEHQARQSERRELQERRRRDAIAAATRLTEALVDHLNVGVAQAYVNQRKLDQEVKTLQVQAAQFARQTGHWISMVENFNQALKEIGDVENWARSIELDMRTIATALEYIYKGQLQPSCS
SIO_010081: BLOC1S1
subclass of: SO_0000673
so part of: BLOC1S1
location: join(555838..555898,556200..556272,556944..557076,557640..557750)
location: region:555838-557750:1
so has part: feature:555838-555898:1:exon
so has part: feature:556200-556272:1:exon
so has part: feature:556944-557076:1:exon
so has part: feature:557640-557750:1:exon

XP_039944418.1
type: Protein
SIO_000068: ncbiprotein

position:555838:1
position: 555838
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:557750:1
position: 557750
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:555838-555898:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:556200-556272:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:556944-557076:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:557640-557750:1:exon

RDH5
type: Gene
subclass of: SO_0000704
RO_0002162: 43150
gene: RDH5
note: retinol dehydrogenase 5; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 559150..561475
location: region:559150-561475:1
so has part: feature:559150-561475:1:exon
subclass of: SO_0000010

120764511
type: Gene
SIO_000068: ncbigene

position:559150:1
position: 559150
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:561475:1
position: 561475
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:559150-561475:1:exon

RDH5
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 43150
gene: RDH5
product: retinol dehydrogenase 5, transcript variant X2
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_040088505.2
SIO_010081: RDH5
subclass of: SO_0000673
so part of: RDH5
location: join(559150..559343,559651..559969,560412..560670,560845..561008,561183..561475)
location: region:559150-561475:1
so has part: feature:559150-559343:1:exon
so has part: feature:559651-559969:1:exon
so has part: feature:560412-560670:1:exon
so has part: feature:560845-561008:1:exon
so has part: feature:561183-561475:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:559150-559343:1:exon

position:559343:1
position: 559343
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:559651-559969:1:exon

position:559651:1
position: 559651
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:559969:1
position: 559969
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:560412-560670:1:exon

position:560412:1
position: 560412
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:560670:1
position: 560670
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:560845-561008:1:exon

position:560845:1
position: 560845
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:561008:1
position: 561008
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:561183-561475:1:exon

position:561183:1
position: 561183
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

RDH5
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 43150
gene: RDH5
product: retinol dehydrogenase 5, transcript variant X1
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_040088504.2
SIO_010081: RDH5
subclass of: SO_0000673
so part of: RDH5
location: join(559150..559313,559651..559969,560412..560670,560845..561008,561183..561475)
location: region:559150-561475:1
so has part: feature:559150-559313:1:exon
so has part: feature:559651-559969:1:exon
so has part: feature:560412-560670:1:exon
so has part: feature:560845-561008:1:exon
so has part: feature:561183-561475:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:559150-559313:1:exon

position:559313:1
position: 559313
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:559651-559969:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:560412-560670:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:560845-561008:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:561183-561475:1:exon

RDH5
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 43150
gene: RDH5
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: retinol dehydrogenase 5 isoform X1
translation: MAGAMWLYVALVAVAWALGWLVRDRRTLPTVTDKHVFITGCDSGFGNLLARRLARRGYRVLAACLTPQGAESLRGDSAGGHLRTTLLDVTRSDSIRRAAEWVQKEVGEKGLFGLVNNAGVANPIGPTEWMDIEDFRRVMAVNAFGAIEVTLQLLPLLKRARGRVVNTSSVLGRISANGGGYCMSKFCIEAFSDSLRRDMQHFGVKVSVVEPGFFKTNVTDLDSLEASLRQRWERLEPDTRSSYGEHFFPQYLKVQRLLLSLLCDKDLSKVTRCIEHALQAQHPRSRYSAGWDAKLLWLPASYMPSALVDLGLALILPKPAQSVP
SIO_010081: RDH5
subclass of: SO_0000673
so part of: RDH5
location: join(559305..559313,559651..559969,560412..560670,560845..561008,561183..561406)
location: region:559305-561406:1
so has part: feature:559305-559313:1:exon
so has part: feature:559651-559969:1:exon
so has part: feature:560412-560670:1:exon
so has part: feature:560845-561008:1:exon
so has part: feature:561183-561406:1:exon

XP_039944438.1
type: Protein
SIO_000068: ncbiprotein

position:559305:1
position: 559305
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:561406:1
position: 561406
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:559305-559313:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:559651-559969:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:560412-560670:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:560845-561008:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:561183-561406:1:exon

RDH5
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 43150
gene: RDH5
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: retinol dehydrogenase 5 isoform X2
translation: MWLYVALVAVAWALGWLVRDRRTLPTVTDKHVFITGCDSGFGNLLARRLARRGYRVLAACLTPQGAESLRGDSAGGHLRTTLLDVTRSDSIRRAAEWVQKEVGEKGLFGLVNNAGVANPIGPTEWMDIEDFRRVMAVNAFGAIEVTLQLLPLLKRARGRVVNTSSVLGRISANGGGYCMSKFCIEAFSDSLRRDMQHFGVKVSVVEPGFFKTNVTDLDSLEASLRQRWERLEPDTRSSYGEHFFPQYLKVQRLLLSLLCDKDLSKVTRCIEHALQAQHPRSRYSAGWDAKLLWLPASYMPSALVDLGLALILPKPAQSVP
SIO_010081: RDH5
subclass of: SO_0000673
so part of: RDH5
location: join(559654..559969,560412..560670,560845..561008,561183..561406)
location: region:559654-561406:1
so has part: feature:559654-559969:1:exon
so has part: feature:560412-560670:1:exon
so has part: feature:560845-561008:1:exon
so has part: feature:561183-561406:1:exon

XP_039944439.1
type: Protein
SIO_000068: ncbiprotein

position:559654:1
position: 559654
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:559654-559969:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:560412-560670:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:560845-561008:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:561183-561406:1:exon

CD63
type: Gene
subclass of: SO_0000704
RO_0002162: 43150
gene: CD63
note: CD63 molecule; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(561844..566307)
location: region:561844-566307:-1
so has part: feature:561844-566307:-1:exon
subclass of: SO_0000010

120764512
type: Gene
SIO_000068: ncbigene

position:561844:-1
position: 561844
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:566307:-1
position: 566307
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:561844-566307:-1:exon

CD63
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 43150
gene: CD63
product: CD63 molecule, transcript variant X1
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_040088506.2
SIO_010081: CD63
subclass of: SO_0000673
so part of: CD63
location: complement(join(561844..561998,562436..562519,562765..562908,563865..563960,564350..564424,564665..564853,565793..565870,566229..566307))
location: region:561844-566307:-1
so has part: feature:566229-566307:-1:exon
so has part: feature:565793-565870:-1:exon
so has part: feature:564665-564853:-1:exon
so has part: feature:564350-564424:-1:exon
so has part: feature:563865-563960:-1:exon
so has part: feature:562765-562908:-1:exon
so has part: feature:562436-562519:-1:exon
so has part: feature:561844-561998:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:566229-566307:-1:exon

position:566229:-1
position: 566229
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:565793-565870:-1:exon

position:565793:-1
position: 565793
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:565870:-1
position: 565870
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:564665-564853:-1:exon

position:564665:-1
position: 564665
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:564853:-1
position: 564853
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:564350-564424:-1:exon

position:564350:-1
position: 564350
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:564424:-1
position: 564424
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:563865-563960:-1:exon

position:563865:-1
position: 563865
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:563960:-1
position: 563960
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:562765-562908:-1:exon

position:562765:-1
position: 562765
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:562908:-1
position: 562908
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:562436-562519:-1:exon

position:562436:-1
position: 562436
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:562519:-1
position: 562519
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:561844-561998:-1:exon

position:561998:-1
position: 561998
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

CD63
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 43150
gene: CD63
product: CD63 molecule, transcript variant X2
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_058423822.1
SIO_010081: CD63
subclass of: SO_0000673
so part of: CD63
location: complement(join(561844..561998,562436..562519,562765..562908,563865..563960,564350..564424,564665..564853,565793..565869,566049..566053))
location: region:561844-566053:-1
so has part: feature:566049-566053:-1:exon
so has part: feature:565793-565869:-1:exon
so has part: feature:564665-564853:-1:exon
so has part: feature:564350-564424:-1:exon
so has part: feature:563865-563960:-1:exon
so has part: feature:562765-562908:-1:exon
so has part: feature:562436-562519:-1:exon
so has part: feature:561844-561998:-1:exon

position:566053:-1
position: 566053
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:566049-566053:-1:exon

position:566049:-1
position: 566049
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:565793-565869:-1:exon

position:565869:-1
position: 565869
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:564665-564853:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:564350-564424:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:563865-563960:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:562765-562908:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:562436-562519:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:561844-561998:-1:exon

CD63
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 43150
gene: CD63
product: CD63 molecule, transcript variant X3
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_058423823.1
SIO_010081: CD63
subclass of: SO_0000673
so part of: CD63
location: complement(join(561844..561998,562436..562519,562765..562908,563865..563960,564350..564424,564665..564853,565793..565869,566026..566029))
location: region:561844-566029:-1
so has part: feature:566026-566029:-1:exon
so has part: feature:565793-565869:-1:exon
so has part: feature:564665-564853:-1:exon
so has part: feature:564350-564424:-1:exon
so has part: feature:563865-563960:-1:exon
so has part: feature:562765-562908:-1:exon
so has part: feature:562436-562519:-1:exon
so has part: feature:561844-561998:-1:exon

position:566029:-1
position: 566029
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:566026-566029:-1:exon

position:566026:-1
position: 566026
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:565793-565869:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:564665-564853:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:564350-564424:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:563865-563960:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:562765-562908:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:562436-562519:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:561844-561998:-1:exon

CD63
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 43150
gene: CD63
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: CD63 antigen
translation: MAMEGGMKCVKFLVFFFNFIFWVCGVALIVIGILALVALGKAPVAPIAGSSWTPVGVVVLGVVIFFTSFFGCCGAWKESYCMVTTFAVLLSLIFLVEIAAAITGYVFKHKVHGLVEEGLWEAMRRYDQDPSLTAALDTFQKEFFCCGVDNYTDWASIGRFGDNDTVPRSCCRISTDTCNVRPTPDTVYEKGCLPSLEAWLKRNIVVLAAVALGIAFFEILGVVFSCCLMRGIRSGYEVM
SIO_010081: CD63
subclass of: SO_0000673
so part of: CD63
location: complement(join(561933..561998,562436..562519,562765..562908,563865..563960,564350..564424,564665..564853,565793..565858))
location: region:561933-565858:-1
so has part: feature:565793-565858:-1:exon
so has part: feature:564665-564853:-1:exon
so has part: feature:564350-564424:-1:exon
so has part: feature:563865-563960:-1:exon
so has part: feature:562765-562908:-1:exon
so has part: feature:562436-562519:-1:exon
so has part: feature:561933-561998:-1:exon

XP_039944440.1
type: Protein
SIO_000068: ncbiprotein

position:561933:-1
position: 561933
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:565858:-1
position: 565858
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:565793-565858:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:564665-564853:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:564350-564424:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:563865-563960:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:562765-562908:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:562436-562519:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:561933-561998:-1:exon

CD63
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 43150
gene: CD63
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: CD63 antigen
translation: MAMEGGMKCVKFLVFFFNFIFWVCGVALIVIGILALVALGKAPVAPIAGSSWTPVGVVVLGVVIFFTSFFGCCGAWKESYCMVTTFAVLLSLIFLVEIAAAITGYVFKHKVHGLVEEGLWEAMRRYDQDPSLTAALDTFQKEFFCCGVDNYTDWASIGRFGDNDTVPRSCCRISTDTCNVRPTPDTVYEKGCLPSLEAWLKRNIVVLAAVALGIAFFEILGVVFSCCLMRGIRSGYEVM
SIO_010081: CD63
subclass of: SO_0000673
so part of: CD63
location: complement(join(561933..561998,562436..562519,562765..562908,563865..563960,564350..564424,564665..564853,565793..565858))
location: region:561933-565858:-1
so has part: feature:565793-565858:-1:exon
so has part: feature:564665-564853:-1:exon
so has part: feature:564350-564424:-1:exon
so has part: feature:563865-563960:-1:exon
so has part: feature:562765-562908:-1:exon
so has part: feature:562436-562519:-1:exon
so has part: feature:561933-561998:-1:exon

XP_058279805.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:565793-565858:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:564665-564853:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:564350-564424:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:563865-563960:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:562765-562908:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:562436-562519:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:561933-561998:-1:exon

CD63
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 43150
gene: CD63
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: CD63 antigen
translation: MAMEGGMKCVKFLVFFFNFIFWVCGVALIVIGILALVALGKAPVAPIAGSSWTPVGVVVLGVVIFFTSFFGCCGAWKESYCMVTTFAVLLSLIFLVEIAAAITGYVFKHKVHGLVEEGLWEAMRRYDQDPSLTAALDTFQKEFFCCGVDNYTDWASIGRFGDNDTVPRSCCRISTDTCNVRPTPDTVYEKGCLPSLEAWLKRNIVVLAAVALGIAFFEILGVVFSCCLMRGIRSGYEVM
SIO_010081: CD63
subclass of: SO_0000673
so part of: CD63
location: complement(join(561933..561998,562436..562519,562765..562908,563865..563960,564350..564424,564665..564853,565793..565858))
location: region:561933-565858:-1
so has part: feature:565793-565858:-1:exon
so has part: feature:564665-564853:-1:exon
so has part: feature:564350-564424:-1:exon
so has part: feature:563865-563960:-1:exon
so has part: feature:562765-562908:-1:exon
so has part: feature:562436-562519:-1:exon
so has part: feature:561933-561998:-1:exon

XP_058279806.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:565793-565858:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:564665-564853:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:564350-564424:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:563865-563960:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:562765-562908:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:562436-562519:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:561933-561998:-1:exon

INPP1
type: Gene
subclass of: SO_0000704
RO_0002162: 43150
gene: INPP1
note: inositol polyphosphate-1-phosphatase; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(566893..569616)
location: region:566893-569616:-1
so has part: feature:566893-569616:-1:exon
subclass of: SO_0000010

120764438
type: Gene
SIO_000068: ncbigene

position:566893:-1
position: 566893
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:569616:-1
position: 569616
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:566893-569616:-1:exon

INPP1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 43150
gene: INPP1
product: inositol polyphosphate-1-phosphatase, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins
transcript id: XM_040088410.2
SIO_010081: INPP1
subclass of: SO_0000673
so part of: INPP1
location: complement(join(566893..567385,567525..567699,567990..568193,568467..568527,568611..568933,569583..569616))
location: region:566893-569616:-1
so has part: feature:569583-569616:-1:exon
so has part: feature:568611-568933:-1:exon
so has part: feature:568467-568527:-1:exon
so has part: feature:567990-568193:-1:exon
so has part: feature:567525-567699:-1:exon
so has part: feature:566893-567385:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:569583-569616:-1:exon

position:569583:-1
position: 569583
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:568611-568933:-1:exon

position:568611:-1
position: 568611
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:568933:-1
position: 568933
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:568467-568527:-1:exon

position:568467:-1
position: 568467
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:568527:-1
position: 568527
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:567990-568193:-1:exon

position:567990:-1
position: 567990
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:568193:-1
position: 568193
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:567525-567699:-1:exon

position:567525:-1
position: 567525
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:567699:-1
position: 567699
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:566893-567385:-1:exon

position:567385:-1
position: 567385
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

INPP1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 43150
gene: INPP1
product: inositol polyphosphate-1-phosphatase, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins
transcript id: XM_040088409.2
SIO_010081: INPP1
subclass of: SO_0000673
so part of: INPP1
location: complement(join(566893..567385,567525..567699,567990..568193,568467..568527,568611..568933,569518..569614))
location: region:566893-569614:-1
so has part: feature:569518-569614:-1:exon
so has part: feature:568611-568933:-1:exon
so has part: feature:568467-568527:-1:exon
so has part: feature:567990-568193:-1:exon
so has part: feature:567525-567699:-1:exon
so has part: feature:566893-567385:-1:exon

position:569614:-1
position: 569614
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:569518-569614:-1:exon

position:569518:-1
position: 569518
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:568611-568933:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:568467-568527:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:567990-568193:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:567525-567699:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:566893-567385:-1:exon

INPP1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 43150
gene: INPP1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: inositol polyphosphate 1-phosphatase
translation: MAGLLQALVAVSQKAAEVARLCRAEEPLFRLLVAEKTGPDRNARFLQDFKTLADVLIQELIKHDLGTQFPELRGHIHGEESSEFRDAEGGTVTVRVCATPGDTVALLLAVLGPEQMRAAELLAEAVHREVTLGDTELASINPGVSPEDVGIWIDPIDSTNEFIGGREDVAAVDGVAPGGLRSALVLVGAFDRRTGVPVLGVINEPFFQRDPQTGRWQGRYHWGVAHGSTRLCSLSPPAPRPCPRVVLSRAEGPAVRRALDSLGGGPPLLAAGAGYKLLCVALGLADAFVLSQATTFAWDSCAPHAILRALGGGVVALEGALRARREGGSGETPELRYHRPQPGREGAERWANREGLVAFVHPQHLRAVLAALGDVPGL
SIO_010081: INPP1
subclass of: SO_0000673
so part of: INPP1
location: complement(join(566893..567385,567525..567699,567990..568193,568467..568527,568611..568814))
location: region:566893-568814:-1
so has part: feature:568611-568814:-1:exon
so has part: feature:568467-568527:-1:exon
so has part: feature:567990-568193:-1:exon
so has part: feature:567525-567699:-1:exon
so has part: feature:566893-567385:-1:exon

XP_039944343.1
type: Protein
SIO_000068: ncbiprotein

position:568814:-1
position: 568814
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:568611-568814:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:568467-568527:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:567990-568193:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:567525-567699:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:566893-567385:-1:exon

INPP1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 43150
gene: INPP1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: inositol polyphosphate 1-phosphatase
translation: MAGLLQALVAVSQKAAEVARLCRAEEPLFRLLVAEKTGPDRNARFLQDFKTLADVLIQELIKHDLGTQFPELRGHIHGEESSEFRDAEGGTVTVRVCATPGDTVALLLAVLGPEQMRAAELLAEAVHREVTLGDTELASINPGVSPEDVGIWIDPIDSTNEFIGGREDVAAVDGVAPGGLRSALVLVGAFDRRTGVPVLGVINEPFFQRDPQTGRWQGRYHWGVAHGSTRLCSLSPPAPRPCPRVVLSRAEGPAVRRALDSLGGGPPLLAAGAGYKLLCVALGLADAFVLSQATTFAWDSCAPHAILRALGGGVVALEGALRARREGGSGETPELRYHRPQPGREGAERWANREGLVAFVHPQHLRAVLAALGDVPGL
SIO_010081: INPP1
subclass of: SO_0000673
so part of: INPP1
location: complement(join(566893..567385,567525..567699,567990..568193,568467..568527,568611..568814))
location: region:566893-568814:-1
so has part: feature:568611-568814:-1:exon
so has part: feature:568467-568527:-1:exon
so has part: feature:567990-568193:-1:exon
so has part: feature:567525-567699:-1:exon
so has part: feature:566893-567385:-1:exon

XP_039944344.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:568611-568814:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:568467-568527:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:567990-568193:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:567525-567699:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:566893-567385:-1:exon

GDF11
type: Gene
subclass of: SO_0000704
RO_0002162: 43150
gene: GDF11
note: growth differentiation factor 11; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 571303..576431
location: region:571303-576431:1
so has part: feature:571303-576431:1:exon
subclass of: SO_0000010

120764434
type: Gene
SIO_000068: ncbigene

position:571303:1
position: 571303
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:576431:1
position: 576431
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:571303-576431:1:exon

GDF11
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 43150
gene: GDF11
product: growth differentiation factor 11
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 48 Proteins
transcript id: XM_040088405.1
SIO_010081: GDF11
subclass of: SO_0000673
so part of: GDF11
location: join(571303..571654,575038..575411,576050..576431)
location: region:571303-576431:1
so has part: feature:571303-571654:1:exon
so has part: feature:575038-575411:1:exon
so has part: feature:576050-576431:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:571303-571654:1:exon

position:571654:1
position: 571654
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:575038-575411:1:exon

position:575038:1
position: 575038
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:575411:1
position: 575411
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:576050-576431:1:exon

position:576050:1
position: 576050
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

GDF11
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 43150
gene: GDF11
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: growth/differentiation factor 11
translation: MAPLWWLLGSLVAAVAGGGSVEQPPASEPACPVCLWRRQSKELRLESIKSQILSKLRLKEAPNITREVVKQLLPKAPPLQQLLDLHDFQGDSLQHDEYLEEDEYHATTETVISMAQETDPAVQIEGNPHCCFFNFSPKIMFTKVVKAQLWVYLRPVQHTSTVYLQILRLKPVTDEGSRHIRIRSLKIELNSRAGHWQSIDFKHVLQNWFKQPHNNWGIEINAFDPNGNDLAVTSLGPGAEGLHPFMELRVLENNKRSRRNLGLDCDEHSTESRCCRYPLTVDFEAFGWDWIIAPKRYKANYCSGQCEYMFMQKYPHTHLVQQANPRGSAGPCCTPTKMSPINMLYFNDKQQIIYGKIPGMVVDRCGCS
SIO_010081: GDF11
subclass of: SO_0000673
so part of: GDF11
location: join(571303..571654,575038..575411,576050..576431)
location: region:571303-576431:1
so has part: feature:571303-571654:1:exon
so has part: feature:575038-575411:1:exon
so has part: feature:576050-576431:1:exon

XP_039944339.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:571303-571654:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:575038-575411:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:576050-576431:1:exon

SARNP
type: Gene
subclass of: SO_0000704
RO_0002162: 43150
gene: SARNP
note: SAP domain containing ribonucleoprotein; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(580373..587673)
location: region:580373-587673:-1
so has part: feature:580373-587673:-1:exon
subclass of: SO_0000010

120764421
type: Gene
SIO_000068: ncbigene

position:580373:-1
position: 580373
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:587673:-1
position: 587673
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:580373-587673:-1:exon

SARNP
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 43150
gene: SARNP
product: SAP domain containing ribonucleoprotein
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_040088387.2
SIO_010081: SARNP
subclass of: SO_0000673
so part of: SARNP
location: complement(join(580373..580885,581251..581321,581828..581908,582274..582342,582669..582694,583044..583072,583663..583736,585014..585065,585808..585875,586550..586596,586733..586832,587558..587673))
location: region:580373-587673:-1
so has part: feature:587558-587673:-1:exon
so has part: feature:586733-586832:-1:exon
so has part: feature:586550-586596:-1:exon
so has part: feature:585808-585875:-1:exon
so has part: feature:585014-585065:-1:exon
so has part: feature:583663-583736:-1:exon
so has part: feature:583044-583072:-1:exon
so has part: feature:582669-582694:-1:exon
so has part: feature:582274-582342:-1:exon
so has part: feature:581828-581908:-1:exon
so has part: feature:581251-581321:-1:exon
so has part: feature:580373-580885:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:587558-587673:-1:exon

position:587558:-1
position: 587558
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:586733-586832:-1:exon

position:586733:-1
position: 586733
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:586832:-1
position: 586832
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:586550-586596:-1:exon

position:586550:-1
position: 586550
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:586596:-1
position: 586596
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:585808-585875:-1:exon

position:585808:-1
position: 585808
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:585875:-1
position: 585875
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:585014-585065:-1:exon

position:585014:-1
position: 585014
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:585065:-1
position: 585065
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:583663-583736:-1:exon

position:583663:-1
position: 583663
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:583736:-1
position: 583736
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:583044-583072:-1:exon

position:583044:-1
position: 583044
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:583072:-1
position: 583072
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:582669-582694:-1:exon

position:582669:-1
position: 582669
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:582694:-1
position: 582694
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:582274-582342:-1:exon

position:582274:-1
position: 582274
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:582342:-1
position: 582342
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:581828-581908:-1:exon

position:581828:-1
position: 581828
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:581908:-1
position: 581908
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:581251-581321:-1:exon

position:581251:-1
position: 581251
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:581321:-1
position: 581321
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:580373-580885:-1:exon

position:580885:-1
position: 580885
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

SARNP
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 43150
gene: SARNP
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: SAP domain-containing ribonucleoprotein
translation: MAAEPVELHKLKLVELKQECLARGLEAKGNKQDLIHRLQAYLEEHAEEEPNEEDVLGEEIEEEEPKAPEPPVKVEEAPVKSPDVIQEKKVVKISSEISQMERMQKRAERFNVPVSLESKKAARAARFGLATIPTKGLSADSKPTINLEKLKERAQRFGLNVSSLSKKSEEDEKLKKRKERFGIVTGAGAAEDSEAKKRKRAERFGIV
SIO_010081: SARNP
subclass of: SO_0000673
so part of: SARNP
location: complement(join(581280..581321,581828..581908,582274..582342,582669..582694,583044..583072,583663..583736,585014..585065,585808..585875,586550..586596,586733..586832,587558..587593))
location: region:581280-587593:-1
so has part: feature:587558-587593:-1:exon
so has part: feature:586733-586832:-1:exon
so has part: feature:586550-586596:-1:exon
so has part: feature:585808-585875:-1:exon
so has part: feature:585014-585065:-1:exon
so has part: feature:583663-583736:-1:exon
so has part: feature:583044-583072:-1:exon
so has part: feature:582669-582694:-1:exon
so has part: feature:582274-582342:-1:exon
so has part: feature:581828-581908:-1:exon
so has part: feature:581280-581321:-1:exon

XP_039944321.1
type: Protein
SIO_000068: ncbiprotein

position:581280:-1
position: 581280
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:587593:-1
position: 587593
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:587558-587593:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:586733-586832:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:586550-586596:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:585808-585875:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:585014-585065:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:583663-583736:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:583044-583072:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:582669-582694:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:582274-582342:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:581828-581908:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:581280-581321:-1:exon

MCRS1
type: Gene
subclass of: SO_0000704
RO_0002162: 43150
gene: MCRS1
note: microspherule protein 1; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 588555..593649
location: region:588555-593649:1
so has part: feature:588555-593649:1:exon
subclass of: SO_0000010

120764515
type: Gene
SIO_000068: ncbigene

position:588555:1
position: 588555
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:593649:1
position: 593649
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:588555-593649:1:exon

MCRS1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 43150
gene: MCRS1
product: microspherule protein 1
experiment: COORDINATES: polyA evidence [ECO:0006239]
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon
transcript id: XM_040088510.2
SIO_010081: MCRS1
subclass of: SO_0000673
so part of: MCRS1
location: join(588555..588831,589331..589440,589672..589777,589812..589838,590104..590260,590387..590496,590678..590786,590875..591013,591359..591434,591692..591720,591828..591920,592014..592096,592341..592428,592783..592910,593137..593649)
location: region:588555-593649:1
so has part: feature:588555-588831:1:exon
so has part: feature:589331-589440:1:exon
so has part: feature:589672-589777:1:exon
so has part: feature:589812-589838:1:exon
so has part: feature:590104-590260:1:exon
so has part: feature:590387-590496:1:exon
so has part: feature:590678-590786:1:exon
so has part: feature:590875-591013:1:exon
so has part: feature:591359-591434:1:exon
so has part: feature:591692-591720:1:exon
so has part: feature:591828-591920:1:exon
so has part: feature:592014-592096:1:exon
so has part: feature:592341-592428:1:exon
so has part: feature:592783-592910:1:exon
so has part: feature:593137-593649:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:588555-588831:1:exon

position:588831:1
position: 588831
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:589331-589440:1:exon

position:589331:1
position: 589331
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:589440:1
position: 589440
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:589672-589777:1:exon

position:589672:1
position: 589672
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:589777:1
position: 589777
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:589812-589838:1:exon

position:589812:1
position: 589812
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:589838:1
position: 589838
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:590104-590260:1:exon

position:590104:1
position: 590104
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:590260:1
position: 590260
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:590387-590496:1:exon

position:590387:1
position: 590387
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:590496:1
position: 590496
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:590678-590786:1:exon

position:590678:1
position: 590678
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:590786:1
position: 590786
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:590875-591013:1:exon

position:590875:1
position: 590875
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:591013:1
position: 591013
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:591359-591434:1:exon

position:591359:1
position: 591359
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:591434:1
position: 591434
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:591692-591720:1:exon

position:591692:1
position: 591692
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:591720:1
position: 591720
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:591828-591920:1:exon

position:591828:1
position: 591828
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:591920:1
position: 591920
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:592014-592096:1:exon

position:592014:1
position: 592014
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:592096:1
position: 592096
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:592341-592428:1:exon

position:592341:1
position: 592341
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:592428:1
position: 592428
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:592783-592910:1:exon

position:592783:1
position: 592783
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:592910:1
position: 592910
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:593137-593649:1:exon

position:593137:1
position: 593137
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

MCRS1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 43150
gene: MCRS1
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: microspherule protein 1
translation: MATSRSEDEESLAGPKRGPATPVGTVPKRRSSSRFIKRRKFDDELVESSLAKSSRAKGGPEPPPRPGGTRPPPGERRKVSRAVPPPGPPGPGPPPGLPKRLKKSKPSPAPRDLGRWKPADDLLLINAVLQTNDLTSVHLGVKFSCRFTLREIQERWYSLLYDPVICKLSCQAMRQLHPEAVAAIQSKVLFSKAEEQLLTRVPSSPVPSLDTFQELLQRHPAVFYPARTPKALQLHWQLLRQYHLLQDQTVQPLPKGDQVLNFSDAEELLDDSKLRDVRDEVLEHELTVADRRQKREIRQLEQELHRWQVLVDSITGMSSPDFDSQTLAVLRGRMVRYLMRSREITLGRATKDNQIDVDLALEGPAWKISRKQGVIKLKNNGDFFIANEGRRPIYIDGRPVLGGNKWKLNNNSVVEIASLRFVFLINHELITLIRNEAARLGHQ
SIO_010081: MCRS1
subclass of: SO_0000673
so part of: MCRS1
location: join(589340..589440,589672..589777,589812..589838,590104..590260,590387..590496,590678..590786,590875..591013,591359..591434,591692..591720,591828..591920,592014..592096,592341..592428,592783..592910,593137..593223)
location: region:589340-593223:1
so has part: feature:589340-589440:1:exon
so has part: feature:589672-589777:1:exon
so has part: feature:589812-589838:1:exon
so has part: feature:590104-590260:1:exon
so has part: feature:590387-590496:1:exon
so has part: feature:590678-590786:1:exon
so has part: feature:590875-591013:1:exon
so has part: feature:591359-591434:1:exon
so has part: feature:591692-591720:1:exon
so has part: feature:591828-591920:1:exon
so has part: feature:592014-592096:1:exon
so has part: feature:592341-592428:1:exon
so has part: feature:592783-592910:1:exon
so has part: feature:593137-593223:1:exon

XP_039944444.1
type: Protein
SIO_000068: ncbiprotein

position:589340:1
position: 589340
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:593223:1
position: 593223
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:589340-589440:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:589672-589777:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:589812-589838:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:590104-590260:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:590387-590496:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:590678-590786:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:590875-591013:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:591359-591434:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:591692-591720:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:591828-591920:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:592014-592096:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:592341-592428:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:592783-592910:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:593137-593223:1:exon

LOC120764379
type: Gene
subclass of: SO_0000704
RO_0002162: 43150
gene: LOC120764379
note: spermatogenesis-associated serine-rich protein 2-like; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(593689..598282)
location: region:593689-598282:-1
so has part: feature:593689-598282:-1:exon
subclass of: SO_0000010

120764379
type: Gene
SIO_000068: ncbigene

position:593689:-1
position: 593689
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:598282:-1
position: 598282
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:593689-598282:-1:exon

LOC120764379
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 43150
gene: LOC120764379
product: spermatogenesis-associated serine-rich protein 2-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein
transcript id: XM_040088332.1
SIO_010081: LOC120764379
subclass of: SO_0000673
so part of: LOC120764379
location: complement(join(593689..594486,594909..595120,595256..595358,595501..595511,598273..598282))
location: region:593689-598282:-1
so has part: feature:598273-598282:-1:exon
so has part: feature:595501-595511:-1:exon
so has part: feature:595256-595358:-1:exon
so has part: feature:594909-595120:-1:exon
so has part: feature:593689-594486:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:598273-598282:-1:exon

position:598273:-1
position: 598273
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:595501-595511:-1:exon

position:595501:-1
position: 595501
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:595511:-1
position: 595511
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:595256-595358:-1:exon

position:595256:-1
position: 595256
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:595358:-1
position: 595358
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:594909-595120:-1:exon

position:594909:-1
position: 594909
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:595120:-1
position: 595120
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:593689-594486:-1:exon

position:594486:-1
position: 594486
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC120764379
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 43150
gene: LOC120764379
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: spermatogenesis-associated serine-rich protein 2-like
translation: MFRADIKHFVSERKFDEELGRAGRFGCDLEALRGSIGAFGQVSHPRPSYSSRSRCSSSPAFPTGLAPGSSPAFPGSAAPPMGSAPRSPPEFPGSSPAFPGSPEGSAAPAEPQPPQRSRKPPGAAGPRPSPQNPPGIPKNPGIPKNPRSRREPPGKPRRSRPEGASS
SIO_010081: LOC120764379
subclass of: SO_0000673
so part of: LOC120764379
location: complement(join(594322..594486,594909..595120,595256..595358,595501..595511,598273..598282))
location: region:594322-598282:-1
so has part: feature:598273-598282:-1:exon
so has part: feature:595501-595511:-1:exon
so has part: feature:595256-595358:-1:exon
so has part: feature:594909-595120:-1:exon
so has part: feature:594322-594486:-1:exon

XP_039944266.1
type: Protein
SIO_000068: ncbiprotein

position:594322:-1
position: 594322
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:598273-598282:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:595501-595511:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:595256-595358:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:594909-595120:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:594322-594486:-1:exon

HOXC9
type: Gene
subclass of: SO_0000704
RO_0002162: 43150
gene: HOXC9
note: homeobox C9; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(598176..601639)
location: region:598176-601639:-1
so has part: feature:598176-601639:-1:exon
subclass of: SO_0000010

120764432
type: Gene
SIO_000068: ncbigene

position:598176:-1
position: 598176
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:601639:-1
position: 601639
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:598176-601639:-1:exon

HOXC9
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 43150
gene: HOXC9
product: homeobox C9
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 17 Proteins
transcript id: XM_040088404.2
SIO_010081: HOXC9
subclass of: SO_0000673
so part of: HOXC9
location: complement(join(598176..598738,601065..601639))
location: region:598176-601639:-1
so has part: feature:601065-601639:-1:exon
so has part: feature:598176-598738:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:601065-601639:-1:exon

position:601065:-1
position: 601065
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:598176-598738:-1:exon

position:598738:-1
position: 598738
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

HOXC9
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 43150
gene: HOXC9
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: homeobox protein Hox-C9
translation: MSASGPISNYYVDSLIGPDNEELLAPRFAGPGAARPAGLVPDCSDFPSCSFAPKPAVFTTSWAPVPSQPSVGYPHPHPHAPGHYGPQAAEPPRYVRTWLEPLAGAVSFPAFGARPYGLKADAFGPRGRAECGPADGRAYADFVYAAPGELRERAAQNIPSSPESEAIAAGKHKEEKHELDPNNPVANWIHARSTRKKRCPYTKYQTLELEKEFLFNMYLTRDRRYEVARVLNLTERQVKIWFQNRRMKMKKMNKEKSDKEQQ
SIO_010081: HOXC9
subclass of: SO_0000673
so part of: HOXC9
location: complement(join(598494..598738,601065..601608))
location: region:598494-601608:-1
so has part: feature:601065-601608:-1:exon
so has part: feature:598494-598738:-1:exon

XP_039944338.1
type: Protein
SIO_000068: ncbiprotein

position:598494:-1
position: 598494
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:601608:-1
position: 601608
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:601065-601608:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:598494-598738:-1:exon

HOXC10
type: Gene
subclass of: SO_0000704
RO_0002162: 43150
gene: HOXC10
note: homeobox C10; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(614759..620811)
location: region:614759-620811:-1
so has part: feature:614759-620811:-1:exon
subclass of: SO_0000010

120764431
type: Gene
SIO_000068: ncbigene

position:614759:-1
position: 614759
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:620811:-1
position: 620811
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:614759-620811:-1:exon

HOXC10
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 43150
gene: HOXC10
product: homeobox C10, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 21 Proteins
transcript id: XM_040088402.1
SIO_010081: HOXC10
subclass of: SO_0000673
so part of: HOXC10
location: complement(join(614759..615033,620064..620811))
location: region:614759-620811:-1
so has part: feature:620064-620811:-1:exon
so has part: feature:614759-615033:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:620064-620811:-1:exon

position:620064:-1
position: 620064
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:614759-615033:-1:exon

position:615033:-1
position: 615033
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

HOXC10
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 43150
gene: HOXC10
product: homeobox C10, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 16 Proteins
transcript id: XM_040088403.1
SIO_010081: HOXC10
subclass of: SO_0000673
so part of: HOXC10
location: complement(join(614759..615022,616629..616642,620064..620811))
location: region:614759-620811:-1
so has part: feature:620064-620811:-1:exon
so has part: feature:616629-616642:-1:exon
so has part: feature:614759-615022:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:620064-620811:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:616629-616642:-1:exon

position:616629:-1
position: 616629
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:616642:-1
position: 616642
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:614759-615022:-1:exon

position:615022:-1
position: 615022
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

HOXC10
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 43150
gene: HOXC10
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: homeobox protein Hox-C10 isoform X1
translation: MSCPNNAAPNAFLMEPLPRHDNFTPGPGLFAQPGEFGPLRSCGGLPTLPKRDEASLGSFPSYLAQLDTWADPKSAFRIDQPVASRQLPSCSFPAVKEEGGCCMFGAEKRTKNSAEASLFPSPLPEPCLGDHEVPVPGYYRYPSLEKSPEPAEFQAAFEGRGARSEQLEAPPAPERISPKFQGNFHEKGGSEQQQQQQQQQQQQQQQQQQQQQAGEIKTEKSKASSGEAEKERSKSADAASTDNSDSEAKEEAERGAGGTWLTARSGRKKRCPYTKHQTLELEKEFLFNMYLTRERRLEISRSIALTDRQVKIWFQNRRMKLKKMNRENRIRELTANFSFS
SIO_010081: HOXC10
subclass of: SO_0000673
so part of: HOXC10
location: complement(join(614759..615033,620064..620811))
location: region:614759-620811:-1
so has part: feature:620064-620811:-1:exon
so has part: feature:614759-615033:-1:exon

XP_039944336.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:620064-620811:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:614759-615033:-1:exon

HOXC10
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 43150
gene: HOXC10
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: homeobox protein Hox-C10 isoform X2
translation: MSCPNNAAPNAFLMEPLPRHDNFTPGPGLFAQPGEFGPLRSCGGLPTLPKRDEASLGSFPSYLAQLDTWADPKSAFRIDQPVASRQLPSCSFPAVKEEGGCCMFGAEKRTKNSAEASLFPSPLPEPCLGDHEVPVPGYYRYPSLEKSPEPAEFQAAFEGRGARSEQLEAPPAPERISPKFQGNFHEKGGSEQQQQQQQQQQQQQQQQQQQQQAGEIKTEKSKASSGEAEKERSKSADAASTDNSDSEAKADFRARGAGGTWLTARSGRKKRCPYTKHQTLELEKEFLFNMYLTRERRLEISRSIALTDRQVKIWFQNRRMKLKKMNRENRIRELTANFSFS
SIO_010081: HOXC10
subclass of: SO_0000673
so part of: HOXC10
location: complement(join(614759..615022,616629..616642,620064..620811))
location: region:614759-620811:-1
so has part: feature:620064-620811:-1:exon
so has part: feature:616629-616642:-1:exon
so has part: feature:614759-615022:-1:exon

XP_039944337.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:620064-620811:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:616629-616642:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:614759-615022:-1:exon

HOXC11
type: Gene
subclass of: SO_0000704
RO_0002162: 43150
gene: HOXC11
note: homeobox C11; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(633021..636806)
location: region:633021-636806:-1
so has part: feature:633021-636806:-1:exon
subclass of: SO_0000010

120764499
type: Gene
SIO_000068: ncbigene

position:633021:-1
position: 633021
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:636806:-1
position: 636806
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:633021-636806:-1:exon

HOXC11
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 43150
gene: HOXC11
product: homeobox C11
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 29 Proteins
transcript id: XM_040088486.1
SIO_010081: HOXC11
subclass of: SO_0000673
so part of: HOXC11
location: complement(join(633021..633253,636125..636806))
location: region:633021-636806:-1
so has part: feature:636125-636806:-1:exon
so has part: feature:633021-633253:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:636125-636806:-1:exon

position:636125:-1
position: 636125
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:633021-633253:-1:exon

position:633253:-1
position: 633253
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

HOXC11
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 43150
gene: HOXC11
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: homeobox protein Hox-C11
translation: MFNSVNLGNFCPSQSRKERGGGGGGGGGGDFAERGGCASNLYLPSCTYYVPDFPSVPSFAPARQISYPYPANLAQVPREVPYALEPSGKWHPRGNYAACYSAEELMHRECIPPAEMLLKNESYHHHHHHHHHHQHAPAPPAAPPAASGFYPAVGKNSVLPQGFDRFFESSAFCGAEGAPGKGDEGKSAEGNAQEEEEEEEEEESANPGSASASSSSGAKEGSKSGAQSAPRTRKKRCPYSKFQIRELEREFFFNVYINKEKRLQLSRMLNLSDRQVKIWFQNRRMKEKKLSRDRLQYFSGNPLL
SIO_010081: HOXC11
subclass of: SO_0000673
so part of: HOXC11
location: complement(join(633021..633253,636125..636806))
location: region:633021-636806:-1
so has part: feature:636125-636806:-1:exon
so has part: feature:633021-633253:-1:exon

XP_039944420.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:636125-636806:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:633021-633253:-1:exon

HOXC12
type: Gene
subclass of: SO_0000704
RO_0002162: 43150
gene: HOXC12
note: homeobox C12; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(652604..657799)
location: region:652604-657799:-1
so has part: feature:652604-657799:-1:exon
subclass of: SO_0000010

120764508
type: Gene
SIO_000068: ncbigene

position:652604:-1
position: 652604
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:657799:-1
position: 657799
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:652604-657799:-1:exon

HOXC12
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 43150
gene: HOXC12
product: homeobox C12
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 12 Proteins
transcript id: XM_040088500.1
SIO_010081: HOXC12
subclass of: SO_0000673
so part of: HOXC12
location: complement(join(652604..652842,657265..657799))
location: region:652604-657799:-1
so has part: feature:657265-657799:-1:exon
so has part: feature:652604-652842:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:657265-657799:-1:exon

position:657265:-1
position: 657265
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:652604-652842:-1:exon

position:652842:-1
position: 652842
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

HOXC12
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 43150
gene: HOXC12
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: homeobox protein Hox-C12
translation: MGEHNLLNPGFVGPLVNIHTGDAFYFPNFRASGAQIPGIPSLPYPRRENFGSLPAWAPAEPCGPYPQPYLGFGRTCELARGEEGKCYYREGDKADRAARDNALLALEPLPSAGNLGNLGNFGKFEYAGAEGVAQEPPACQSLESDSGSPLLADGGKGDAAGLVSPLNAGGGGERAGTAGAPWYPMHTRSRKKRKPYSKLQLAELEGEFLVNEFITRQRRRELSDRLNLSDQQVKIWFQNRRMKKKRLLLREQALSFF
SIO_010081: HOXC12
subclass of: SO_0000673
so part of: HOXC12
location: complement(join(652604..652842,657265..657799))
location: region:652604-657799:-1
so has part: feature:657265-657799:-1:exon
so has part: feature:652604-652842:-1:exon

XP_039944434.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:657265-657799:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:652604-652842:-1:exon

HOXC13
type: Gene
subclass of: SO_0000704
RO_0002162: 43150
gene: HOXC13
note: homeobox C13; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(669143..677505)
location: region:669143-677505:-1
so has part: feature:669143-677505:-1:exon
subclass of: SO_0000010

120764502
type: Gene
SIO_000068: ncbigene

position:669143:-1
position: 669143
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:677505:-1
position: 677505
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:669143-677505:-1:exon

HOXC13
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 43150
gene: HOXC13
product: homeobox C13
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 21 Proteins
transcript id: XM_040088489.1
SIO_010081: HOXC13
subclass of: SO_0000673
so part of: HOXC13
location: complement(join(669143..669399,676839..677505))
location: region:669143-677505:-1
so has part: feature:676839-677505:-1:exon
so has part: feature:669143-669399:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:676839-677505:-1:exon

position:676839:-1
position: 676839
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:669143-669399:-1:exon

position:669399:-1
position: 669399
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

HOXC13
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 43150
gene: HOXC13
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: homeobox protein Hox-C13
translation: MTAPLGLPPRWPDALGCRCEEAPREKTRMEGLGHCRESLGHCRESLGAHCRDSLGGHCREMLPHAGLAAPPAAPAAAEGAAFAELAGAEQPRQCPSGSLGYGYPFGPGYYGCRLNLQQKPCAGYHAPDKFAEAGGSLAGEELPARAKEFAFYPGFPGSYQAVPGYLDVSVVPALGAHPEPRHEALLPMEGYQPWALPNAWDGQVYCSKEQPQSAHLWKSPFPDVVPLPPEPSPFRRGRKKRVPYSKAQLKELEKEYAASKFITKEKRRRISAATALSERQVTIWFQNRRVKEKKVVSKTKPGHLHAT
SIO_010081: HOXC13
subclass of: SO_0000673
so part of: HOXC13
location: complement(join(669143..669399,676839..677505))
location: region:669143-677505:-1
so has part: feature:676839-677505:-1:exon
so has part: feature:669143-669399:-1:exon

XP_039944423.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:676839-677505:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:669143-669399:-1:exon

ATP5MC2
type: Gene
subclass of: SO_0000704
RO_0002162: 43150
gene: ATP5MC2
note: ATP synthase membrane subunit c locus 2; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 712475..714519
location: region:712475-714519:1
so has part: feature:712475-714519:1:exon
subclass of: SO_0000010

120764430
type: Gene
SIO_000068: ncbigene

position:712475:1
position: 712475
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:714519:1
position: 714519
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:712475-714519:1:exon

ATP5MC2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 43150
gene: ATP5MC2
product: ATP synthase membrane subunit c locus 2
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_040088401.1
SIO_010081: ATP5MC2
subclass of: SO_0000673
so part of: ATP5MC2
location: join(712475..712533,713418..713513,713876..713947,714029..714201,714286..714519)
location: region:712475-714519:1
so has part: feature:712475-712533:1:exon
so has part: feature:713418-713513:1:exon
so has part: feature:713876-713947:1:exon
so has part: feature:714029-714201:1:exon
so has part: feature:714286-714519:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:712475-712533:1:exon

position:712533:1
position: 712533
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:713418-713513:1:exon

position:713418:1
position: 713418
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:713513:1
position: 713513
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:713876-713947:1:exon

position:713876:1
position: 713876
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:713947:1
position: 713947
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:714029-714201:1:exon

position:714029:1
position: 714029
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:714201:1
position: 714201
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:714286-714519:1:exon

position:714286:1
position: 714286
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

ATP5MC2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 43150
gene: ATP5MC2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ATP synthase F(0) complex subunit C2, mitochondrial
translation: MFTCAKFVSAPALVRRSPWVLGQPLSAALSPETRPEQTVPQVRPGAPRALRTSAAHRDIDTAAKFIGAGAATVGVAGSGAGIGTVFGSLIIGYARNPSLKQQLFSYAILGFALSEAMGLFCLMVAFLILFAM
SIO_010081: ATP5MC2
subclass of: SO_0000673
so part of: ATP5MC2
location: join(713475..713513,713876..713947,714029..714201,714286..714400)
location: region:713475-714400:1
so has part: feature:713475-713513:1:exon
so has part: feature:713876-713947:1:exon
so has part: feature:714029-714201:1:exon
so has part: feature:714286-714400:1:exon

XP_039944335.1
type: Protein
SIO_000068: ncbiprotein

position:713475:1
position: 713475
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:714400:1
position: 714400
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:713475-713513:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:713876-713947:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:714029-714201:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:714286-714400:1:exon

ATF7
type: Gene
subclass of: SO_0000704
RO_0002162: 43150
gene: ATF7
note: activating transcription factor 7; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 715513..750903
location: region:715513-750903:1
so has part: feature:715513-750903:1:exon
subclass of: SO_0000010

120764380
type: Gene
SIO_000068: ncbigene

position:715513:1
position: 715513
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:750903:1
position: 750903
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:715513-750903:1:exon

ATF7
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 43150
gene: ATF7
product: activating transcription factor 7
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins
transcript id: XM_058423790.1
SIO_010081: ATF7
subclass of: SO_0000673
so part of: ATF7
location: join(715513..715585,727457..727514,747836..747932,750354..750472,750823..750903)
location: region:715513-750903:1
so has part: feature:715513-715585:1:exon
so has part: feature:727457-727514:1:exon
so has part: feature:747836-747932:1:exon
so has part: feature:750354-750472:1:exon
so has part: feature:750823-750903:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:715513-715585:1:exon

position:715585:1
position: 715585
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:727457-727514:1:exon

position:727457:1
position: 727457
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:727514:1
position: 727514
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:747836-747932:1:exon

position:747836:1
position: 747836
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:747932:1
position: 747932
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:750354-750472:1:exon

position:750354:1
position: 750354
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:750472:1
position: 750472
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:750823-750903:1:exon

position:750823:1
position: 750823
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

ATF7
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 43150
gene: ATF7
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cyclic AMP-dependent transcription factor ATF-7
translation: MGDDRPFVCSAPGCGQRFTNEDHLAVHKHKHEMTLKFGPARTDSVIIADQTPTPTRFLKNCEEVGLFNELASSFEHEFKKAAEDDEKKRHRSRLPPQPGERQGLKDNGISSESS
SIO_010081: ATF7
subclass of: SO_0000673
so part of: ATF7
location: join(727467..727514,747836..747932,750354..750472,750823..750903)
location: region:727467-750903:1
so has part: feature:727467-727514:1:exon
so has part: feature:747836-747932:1:exon
so has part: feature:750354-750472:1:exon
so has part: feature:750823-750903:1:exon

XP_058279773.1
type: Protein
SIO_000068: ncbiprotein

position:727467:1
position: 727467
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:727467-727514:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:747836-747932:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:750354-750472:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:750823-750903:1:exon

PCBP2
type: Gene
subclass of: SO_0000704
RO_0002162: 43150
gene: PCBP2
note: poly(rC) binding protein 2; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(753014..761202)
location: region:753014-761202:-1
so has part: feature:753014-761202:-1:exon
subclass of: SO_0000010

120764381
type: Gene
SIO_000068: ncbigene

position:753014:-1
position: 753014
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:761202:-1
position: 761202
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:753014-761202:-1:exon

PCBP2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 43150
gene: PCBP2
product: poly(rC) binding protein 2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 ESTs, 5 Proteins
transcript id: XM_040088334.1
SIO_010081: PCBP2
subclass of: SO_0000673
so part of: PCBP2
location: complement(join(753014..753059,753925..754001,754176..754262,755589..755663,755999..756127,756680..756811,758021..758137,758395..758427,758538..758561,758896..759007,761121..761202))
location: region:753014-761202:-1
so has part: feature:761121-761202:-1:exon
so has part: feature:758896-759007:-1:exon
so has part: feature:758538-758561:-1:exon
so has part: feature:758395-758427:-1:exon
so has part: feature:758021-758137:-1:exon
so has part: feature:756680-756811:-1:exon
so has part: feature:755999-756127:-1:exon
so has part: feature:755589-755663:-1:exon
so has part: feature:754176-754262:-1:exon
so has part: feature:753925-754001:-1:exon
so has part: feature:753014-753059:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:761121-761202:-1:exon

position:761121:-1
position: 761121
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:758896-759007:-1:exon

position:758896:-1
position: 758896
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:759007:-1
position: 759007
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:758538-758561:-1:exon

position:758538:-1
position: 758538
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:758561:-1
position: 758561
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:758395-758427:-1:exon

position:758395:-1
position: 758395
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:758427:-1
position: 758427
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:758021-758137:-1:exon

position:758021:-1
position: 758021
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:758137:-1
position: 758137
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:756680-756811:-1:exon

position:756680:-1
position: 756680
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:756811:-1
position: 756811
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:755999-756127:-1:exon

position:755999:-1
position: 755999
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:756127:-1
position: 756127
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:755589-755663:-1:exon

position:755589:-1
position: 755589
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:755663:-1
position: 755663
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:754176-754262:-1:exon

position:754176:-1
position: 754176
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:754262:-1
position: 754262
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:753925-754001:-1:exon

position:753925:-1
position: 753925
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:754001:-1
position: 754001
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:753014-753059:-1:exon

position:753059:-1
position: 753059
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

PCBP2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 43150
gene: PCBP2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: poly(rC)-binding protein 2
translation: MDTGVIEGGLNVTLTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISEGNCPERIITLAGPTNAIFKAFAMIIDKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQVQVAGDMLPNSTERAITIAGIPQSIIECVKQICVVMLESPPKGVTIPYRPKPSSSPVIFAGGQDRYSSGSASYPHTAPSMCLNSDLEGPPQEATRQPLHGNELGPIPAWAAVLPVTWKPIPFKDSMPFHSQM
SIO_010081: PCBP2
subclass of: SO_0000673
so part of: PCBP2
location: complement(join(753014..753059,753925..754001,754176..754262,755589..755663,755999..756127,756680..756811,758021..758137,758395..758427,758538..758561,758896..758964))
location: region:753014-758964:-1
so has part: feature:758896-758964:-1:exon
so has part: feature:758538-758561:-1:exon
so has part: feature:758395-758427:-1:exon
so has part: feature:758021-758137:-1:exon
so has part: feature:756680-756811:-1:exon
so has part: feature:755999-756127:-1:exon
so has part: feature:755589-755663:-1:exon
so has part: feature:754176-754262:-1:exon
so has part: feature:753925-754001:-1:exon
so has part: feature:753014-753059:-1:exon

XP_039944268.1
type: Protein
SIO_000068: ncbiprotein

position:758964:-1
position: 758964
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:758896-758964:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:758538-758561:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:758395-758427:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:758021-758137:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:756680-756811:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:755999-756127:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:755589-755663:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:754176-754262:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:753925-754001:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:753014-753059:-1:exon

AMHR2
type: Gene
subclass of: SO_0000704
RO_0002162: 43150
gene: AMHR2
note: anti-Mullerian hormone receptor type 2; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(761117..765779)
location: region:761117-765779:-1
so has part: feature:761117-765779:-1:exon
subclass of: SO_0000010

120764382
type: Gene
SIO_000068: ncbigene

position:761117:-1
position: 761117
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:765779:-1
position: 765779
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:761117-765779:-1:exon

AMHR2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 43150
gene: AMHR2
product: anti-Mullerian hormone receptor type 2
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins
transcript id: XM_040088335.1
SIO_010081: AMHR2
subclass of: SO_0000673
so part of: AMHR2
location: complement(join(761117..761157,761950..762013,762207..762367,762464..762578,762820..763044,763603..763712,764016..764105,764405..764554,765520..765670,765767..765779))
location: region:761117-765779:-1
so has part: feature:765767-765779:-1:exon
so has part: feature:765520-765670:-1:exon
so has part: feature:764405-764554:-1:exon
so has part: feature:764016-764105:-1:exon
so has part: feature:763603-763712:-1:exon
so has part: feature:762820-763044:-1:exon
so has part: feature:762464-762578:-1:exon
so has part: feature:762207-762367:-1:exon
so has part: feature:761950-762013:-1:exon
so has part: feature:761117-761157:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:765767-765779:-1:exon

position:765767:-1
position: 765767
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:765520-765670:-1:exon

position:765520:-1
position: 765520
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:765670:-1
position: 765670
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:764405-764554:-1:exon

position:764405:-1
position: 764405
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:764554:-1
position: 764554
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:764016-764105:-1:exon

position:764016:-1
position: 764016
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:764105:-1
position: 764105
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:763603-763712:-1:exon

position:763603:-1
position: 763603
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:763712:-1
position: 763712
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:762820-763044:-1:exon

position:762820:-1
position: 762820
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:763044:-1
position: 763044
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:762464-762578:-1:exon

position:762464:-1
position: 762464
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:762578:-1
position: 762578
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:762207-762367:-1:exon

position:762207:-1
position: 762207
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:762367:-1
position: 762367
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:761950-762013:-1:exon

position:761950:-1
position: 761950
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:762013:-1
position: 762013
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:761117-761157:-1:exon

position:761157:-1
position: 761157
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

AMHR2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 43150
gene: AMHR2
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: anti-Muellerian hormone type-2 receptor
translation: MGRSGPQDLSCVSYKHPSVRGSLGGSGGAVAGTVRCPPGHCCVGIWNRSHALVQGCWGGRGVACPSATCGPSPAGHPGSSVLLCLCHGHLCNGFASGTATATAKEPGWWWSAENLWLWGAGPLLLILFSCLGILGRRRTRARTGQSPRGGRRTGVPPEPPSPDLPVLHFRQVLQSGRFSVVWRGTLRQRPVAIKAFAAGAGRRFEAELAVHTLPLMEHENVARLLDTRAAGPRARGGLLVLQLYPAGSLRHFLGQHVGTWTGSVRLALSLARGLAFLHQELWRDGLYKPSVAHRDLSSQNVLVREDGTCAIGDFGLALALPPRAQDSTGARHAVTIRKAGTQRYLAPEILDESLDLRAWAPFAQRRYRRRHR
SIO_010081: AMHR2
subclass of: SO_0000673
so part of: AMHR2
location: complement(join(761117..761157,761950..762013,762207..762367,762464..762578,762820..763044,763603..763712,764016..764105,764405..764554,765520..765670,765767..765779))
location: region:761117-765779:-1
so has part: feature:765767-765779:-1:exon
so has part: feature:765520-765670:-1:exon
so has part: feature:764405-764554:-1:exon
so has part: feature:764016-764105:-1:exon
so has part: feature:763603-763712:-1:exon
so has part: feature:762820-763044:-1:exon
so has part: feature:762464-762578:-1:exon
so has part: feature:762207-762367:-1:exon
so has part: feature:761950-762013:-1:exon
so has part: feature:761117-761157:-1:exon

XP_039944269.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:765767-765779:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:765520-765670:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:764405-764554:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:764016-764105:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:763603-763712:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:762820-763044:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:762464-762578:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:762207-762367:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:761950-762013:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:761117-761157:-1:exon

SP1
type: Gene
subclass of: SO_0000704
RO_0002162: 43150
gene: SP1
note: Sp1 transcription factor; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(770032..783666)
location: region:770032-783666:-1
so has part: feature:770032-783666:-1:exon
subclass of: SO_0000010

120764517
type: Gene
SIO_000068: ncbigene

position:770032:-1
position: 770032
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:783666:-1
position: 783666
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:770032-783666:-1:exon

SP1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 43150
gene: SP1
product: Sp1 transcription factor, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 ESTs, 16 Proteins
transcript id: XM_040088512.2
SIO_010081: SP1
subclass of: SO_0000673
so part of: SP1
location: complement(join(770032..770549,771970..772169,772531..772699,780361..781864,782488..782582,783629..783666))
location: region:770032-783666:-1
so has part: feature:783629-783666:-1:exon
so has part: feature:782488-782582:-1:exon
so has part: feature:780361-781864:-1:exon
so has part: feature:772531-772699:-1:exon
so has part: feature:771970-772169:-1:exon
so has part: feature:770032-770549:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:783629-783666:-1:exon

position:783629:-1
position: 783629
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:782488-782582:-1:exon

position:782488:-1
position: 782488
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:782582:-1
position: 782582
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:780361-781864:-1:exon

position:780361:-1
position: 780361
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:781864:-1
position: 781864
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:772531-772699:-1:exon

position:772531:-1
position: 772531
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:772699:-1
position: 772699
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:771970-772169:-1:exon

position:771970:-1
position: 771970
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:772169:-1
position: 772169
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:770032-770549:-1:exon

position:770549:-1
position: 770549
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

SP1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 43150
gene: SP1
product: Sp1 transcription factor, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 ESTs, 14 Proteins
transcript id: XM_040088513.2
SIO_010081: SP1
subclass of: SO_0000673
so part of: SP1
location: complement(join(770033..770549,771970..772169,772531..772699,780361..781864,782488..782582,783014..783142))
location: region:770033-783142:-1
so has part: feature:783014-783142:-1:exon
so has part: feature:782488-782582:-1:exon
so has part: feature:780361-781864:-1:exon
so has part: feature:772531-772699:-1:exon
so has part: feature:771970-772169:-1:exon
so has part: feature:770033-770549:-1:exon

position:770033:-1
position: 770033
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:783142:-1
position: 783142
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:783014-783142:-1:exon

position:783014:-1
position: 783014
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:782488-782582:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:780361-781864:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:772531-772699:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:771970-772169:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:770033-770549:-1:exon

SP1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 43150
gene: SP1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transcription factor Sp1 isoform X1
translation: MSDQESTEEMSAVKPDKGEGDASSTSSAGGGEAQESQPSPLALLAATCSRIESPNENSNSSQGQQGGSGELDLNAAAAQLTQSANGWQIISAGSSTPTGSKEPGGNGGNGGDASKSRPVSAGPYVVTSASGLQNQQVLTGLPGVIPNIQYQVIPQFQTIDGQQLQFATTPAQVNVQQDASGQLQIIPGSNQQIITSRAGGSNLIAMPNLLQQAVPIQGVGLANNSLSGQTQYVANVPVALNGNITLLPVNSVAASLAPTSQTGTLSSSGSPDSGSQPATSGAASSSGSTATSQASSGAFFTNANSYSTTTTTSNVGVMNFSTSATVGTNVQAQTPQRAGSVPSSDSLQSPVSGVTLQPGQQKEGDQSQQSQQQQQQQQILIQPQLVQGGQTIQALQTTPLSGQTFATQAISQDTLQNLQLQAVPNSGPIIIRTPTVGPNGQVSWQTIQLQNLQVQNPQAQTITLAPMQGVSLGQTGSTSTTLTPIASLPSGTVTVNAAQLSSVPGLQTINLSALGASGIQVHQLQGLPLAIANAPGEHGAQLGLHGGSGDGLGDESTAVEEGETSPDPQPQQGRKTRREACTCPYCKEGEGRSSGDPGKKKQHICHVPGCGKVYGKTSHLRAHLRWHTGERPFICTWVLCGKRFTRSDELQRHKRTHTGEKKFACPECPKRFMRSDHLSKHIKTHQNKKGGGAGAGGGVAMNVSAVPMDAAASAAEGNGGATPSALIATNMVAMEAICPEGIARLAGSGINVMQVADLQSINISGNGF
SIO_010081: SP1
subclass of: SO_0000673
so part of: SP1
location: complement(join(770218..770549,771970..772169,772531..772699,780361..781864,782488..782582,783629..783635))
location: region:770218-783635:-1
so has part: feature:783629-783635:-1:exon
so has part: feature:782488-782582:-1:exon
so has part: feature:780361-781864:-1:exon
so has part: feature:772531-772699:-1:exon
so has part: feature:771970-772169:-1:exon
so has part: feature:770218-770549:-1:exon

XP_039944446.1
type: Protein
SIO_000068: ncbiprotein

position:770218:-1
position: 770218
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:783635:-1
position: 783635
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:783629-783635:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:782488-782582:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:780361-781864:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:772531-772699:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:771970-772169:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:770218-770549:-1:exon

SP1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 43150
gene: SP1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transcription factor Sp1 isoform X2
translation: MSAVKPDKGEGDASSTSSAGGGEAQESQPSPLALLAATCSRIESPNENSNSSQGQQGGSGELDLNAAAAQLTQSANGWQIISAGSSTPTGSKEPGGNGGNGGDASKSRPVSAGPYVVTSASGLQNQQVLTGLPGVIPNIQYQVIPQFQTIDGQQLQFATTPAQVNVQQDASGQLQIIPGSNQQIITSRAGGSNLIAMPNLLQQAVPIQGVGLANNSLSGQTQYVANVPVALNGNITLLPVNSVAASLAPTSQTGTLSSSGSPDSGSQPATSGAASSSGSTATSQASSGAFFTNANSYSTTTTTSNVGVMNFSTSATVGTNVQAQTPQRAGSVPSSDSLQSPVSGVTLQPGQQKEGDQSQQSQQQQQQQQILIQPQLVQGGQTIQALQTTPLSGQTFATQAISQDTLQNLQLQAVPNSGPIIIRTPTVGPNGQVSWQTIQLQNLQVQNPQAQTITLAPMQGVSLGQTGSTSTTLTPIASLPSGTVTVNAAQLSSVPGLQTINLSALGASGIQVHQLQGLPLAIANAPGEHGAQLGLHGGSGDGLGDESTAVEEGETSPDPQPQQGRKTRREACTCPYCKEGEGRSSGDPGKKKQHICHVPGCGKVYGKTSHLRAHLRWHTGERPFICTWVLCGKRFTRSDELQRHKRTHTGEKKFACPECPKRFMRSDHLSKHIKTHQNKKGGGAGAGGGVAMNVSAVPMDAAASAAEGNGGATPSALIATNMVAMEAICPEGIARLAGSGINVMQVADLQSINISGNGF
SIO_010081: SP1
subclass of: SO_0000673
so part of: SP1
location: complement(join(770218..770549,771970..772169,772531..772699,780361..781864,782488..782562))
location: region:770218-782562:-1
so has part: feature:782488-782562:-1:exon
so has part: feature:780361-781864:-1:exon
so has part: feature:772531-772699:-1:exon
so has part: feature:771970-772169:-1:exon
so has part: feature:770218-770549:-1:exon

XP_039944447.1
type: Protein
SIO_000068: ncbiprotein

position:782562:-1
position: 782562
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:782488-782562:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:780361-781864:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:772531-772699:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:771970-772169:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:770218-770549:-1:exon

SP7
type: Gene
subclass of: SO_0000704
RO_0002162: 43150
gene: SP7
note: Sp7 transcription factor; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 793453..794442
location: region:793453-794442:1
so has part: feature:793453-794442:1:exon
subclass of: SO_0000010

120764481
type: Gene
SIO_000068: ncbigene

position:793453:1
position: 793453
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:794442:1
position: 794442
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:793453-794442:1:exon

SP7
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 43150
gene: SP7
product: Sp7 transcription factor
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 16 Proteins
transcript id: XM_040088467.1
SIO_010081: SP7
subclass of: SO_0000673
so part of: SP7
location: 793453..794442
location: region:793453-794442:1
so has part: feature:793453-794442:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:793453-794442:1:exon

SP7
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 43150
gene: SP7
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transcription factor Sp7
translation: MGDSYAAAFPSAPGLLSPSASPQASPGPYGPDYGPFGHPFPAPSGAQEVLGAPVVVAAKGHPAGECLPGVYPSLEMPHPYGSWYKGGIGGGLPGGSGPAAPSWWDVHPNGGWLGGPAGAEGLQGSLQGQPTLSPPLPSYGSDFGALNPPPYTNAPAAPPAPKAAPGETPKGPRGGSLGGRPACDCPNCQELERLGGPGGSRRKPVHSCHIPGCGKVYGKASHLKAHLRWHTGERPFVCNWLFCGKRFTRSDELERHVRTHTREKKFTCLLCSKRFTRSDHLSKHQKTHAEPGTPKPPPGAEQPPASPRPPPASPAKDGGSPEAGSLLEI
SIO_010081: SP7
subclass of: SO_0000673
so part of: SP7
location: 793453..794442
location: region:793453-794442:1
so has part: feature:793453-794442:1:exon

XP_039944401.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:793453-794442:1:exon

AAAS
type: Gene
subclass of: SO_0000704
RO_0002162: 43150
gene: AAAS
note: aladin WD repeat nucleoporin; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 797142..803972
location: region:797142-803972:1
so has part: feature:797142-803972:1:exon
subclass of: SO_0000010

120764457
type: Gene
SIO_000068: ncbigene

position:797142:1
position: 797142
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:803972:1
position: 803972
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:797142-803972:1:exon

AAAS
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 43150
gene: AAAS
product: aladin WD repeat nucleoporin
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_040088440.2
SIO_010081: AAAS
subclass of: SO_0000673
so part of: AAAS
location: join(797142..797424,797694..797821,798294..798349,798470..798561,798824..798870,799223..799321,799993..800136,800232..800352,800495..800619,800760..800820,801518..801608,801893..801986,802117..802184,802272..802353,802749..802833,803714..803972)
location: region:797142-803972:1
so has part: feature:797142-797424:1:exon
so has part: feature:797694-797821:1:exon
so has part: feature:798294-798349:1:exon
so has part: feature:798470-798561:1:exon
so has part: feature:798824-798870:1:exon
so has part: feature:799223-799321:1:exon
so has part: feature:799993-800136:1:exon
so has part: feature:800232-800352:1:exon
so has part: feature:800495-800619:1:exon
so has part: feature:800760-800820:1:exon
so has part: feature:801518-801608:1:exon
so has part: feature:801893-801986:1:exon
so has part: feature:802117-802184:1:exon
so has part: feature:802272-802353:1:exon
so has part: feature:802749-802833:1:exon
so has part: feature:803714-803972:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:797142-797424:1:exon

position:797424:1
position: 797424
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:797694-797821:1:exon

position:797694:1
position: 797694
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:797821:1
position: 797821
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:798294-798349:1:exon

position:798294:1
position: 798294
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:798349:1
position: 798349
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:798470-798561:1:exon

position:798470:1
position: 798470
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:798561:1
position: 798561
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:798824-798870:1:exon

position:798824:1
position: 798824
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:798870:1
position: 798870
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:799223-799321:1:exon

position:799223:1
position: 799223
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:799321:1
position: 799321
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:799993-800136:1:exon

position:799993:1
position: 799993
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:800136:1
position: 800136
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:800232-800352:1:exon

position:800232:1
position: 800232
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:800352:1
position: 800352
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:800495-800619:1:exon

position:800495:1
position: 800495
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:800619:1
position: 800619
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:800760-800820:1:exon

position:800760:1
position: 800760
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:800820:1
position: 800820
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:801518-801608:1:exon

position:801518:1
position: 801518
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:801608:1
position: 801608
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:801893-801986:1:exon

position:801893:1
position: 801893
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:801986:1
position: 801986
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:802117-802184:1:exon

position:802117:1
position: 802117
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:802184:1
position: 802184
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:802272-802353:1:exon

position:802272:1
position: 802272
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:802353:1
position: 802353
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:802749-802833:1:exon

position:802749:1
position: 802749
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:802833:1
position: 802833
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:803714-803972:1:exon

position:803714:1
position: 803714
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

AAAS
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 43150
gene: AAAS
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: aladin
translation: MCSLGLFPPPPPPGDVTLYELNNALVCGRLSEQLPLAFQSQVPDLPVLSLPKEPLKAHGRLEPSARPPFIHHRESLWKRCLSAWRDSGLSALLRELASADEEGLRWLRTGSSHALAVCRWLSSLHGSLFPHLSLTSEDMIAAFSQAVDWAGCTVRAFAWHPHTNKFAVALLDDSIRVYNSSSATVPSLKHRLQRNVASMAWKPLCASILAVACQSCVLVWHLDPTSLSTRPSSGCAQVLSYPGHSPVTSLAWAPGGERLLSASPVDTAMLVWDVSTETCVQLQWFGGGGVTFLAWSPDGSKVLAATPSAVFRVWEAQMWTCERWPTIRGRCQTGCWSPDGSRLLFTVLGESVIYSLSFSEYRGEMQGQVGGSKTASIVADLSETTFETLYGEERIGGEVHSMVWDPTGERLAVIIRGHPESPSTPPAIAVFRTRNSPVFELLPCGFVRGERGARPQLISFHPCFPQGALLTVCWSSGRISHIPFFFVSALEPRASPRRSPVPVLGSVREQPLFSEL
SIO_010081: AAAS
subclass of: SO_0000673
so part of: AAAS
location: join(797302..797424,797694..797821,798294..798349,798470..798561,798824..798870,799223..799321,799993..800136,800232..800352,800495..800619,800760..800820,801518..801608,801893..801986,802117..802184,802272..802353,802749..802833,803714..803848)
location: region:797302-803848:1
so has part: feature:797302-797424:1:exon
so has part: feature:797694-797821:1:exon
so has part: feature:798294-798349:1:exon
so has part: feature:798470-798561:1:exon
so has part: feature:798824-798870:1:exon
so has part: feature:799223-799321:1:exon
so has part: feature:799993-800136:1:exon
so has part: feature:800232-800352:1:exon
so has part: feature:800495-800619:1:exon
so has part: feature:800760-800820:1:exon
so has part: feature:801518-801608:1:exon
so has part: feature:801893-801986:1:exon
so has part: feature:802117-802184:1:exon
so has part: feature:802272-802353:1:exon
so has part: feature:802749-802833:1:exon
so has part: feature:803714-803848:1:exon

XP_039944374.1
type: Protein
SIO_000068: ncbiprotein

position:797302:1
position: 797302
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:803848:1
position: 803848
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:797302-797424:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:797694-797821:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:798294-798349:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:798470-798561:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:798824-798870:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:799223-799321:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:799993-800136:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:800232-800352:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:800495-800619:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:800760-800820:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:801518-801608:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:801893-801986:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:802117-802184:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:802272-802353:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:802749-802833:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:803714-803848:1:exon

MYG1
type: Gene
subclass of: SO_0000704
RO_0002162: 43150
gene: MYG1
note: MYG1 exonuclease; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(805467..807732)
location: region:805467-807732:-1
so has part: feature:805467-807732:-1:exon
subclass of: SO_0000010

120764477
type: Gene
SIO_000068: ncbigene

position:805467:-1
position: 805467
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:807732:-1
position: 807732
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:805467-807732:-1:exon

MYG1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 43150
gene: MYG1
product: MYG1 exonuclease
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_040088464.1
SIO_010081: MYG1
subclass of: SO_0000673
so part of: MYG1
location: complement(join(805467..805925,806002..806183,806433..806555,806627..806776,806921..807080,807147..807259,807577..807732))
location: region:805467-807732:-1
so has part: feature:807577-807732:-1:exon
so has part: feature:807147-807259:-1:exon
so has part: feature:806921-807080:-1:exon
so has part: feature:806627-806776:-1:exon
so has part: feature:806433-806555:-1:exon
so has part: feature:806002-806183:-1:exon
so has part: feature:805467-805925:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:807577-807732:-1:exon

position:807577:-1
position: 807577
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:807147-807259:-1:exon

position:807147:-1
position: 807147
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:807259:-1
position: 807259
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:806921-807080:-1:exon

position:806921:-1
position: 806921
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:807080:-1
position: 807080
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:806627-806776:-1:exon

position:806627:-1
position: 806627
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:806776:-1
position: 806776
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:806433-806555:-1:exon

position:806433:-1
position: 806433
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:806555:-1
position: 806555
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:806002-806183:-1:exon

position:806002:-1
position: 806002
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:806183:-1
position: 806183
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:805467-805925:-1:exon

position:805925:-1
position: 805925
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

MYG1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 43150
gene: MYG1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: MYG1 exonuclease
translation: MAGTGTGTGTATGTGHKRPHPEPAARIGTHDGTFHCDEALACFLLRLLPRYRDAEIVRTRDPQRLAGCDVVVDVGGEYDPERHRYDHHQRSFAESMRSLRPDKPWSTKLSSAGLVYCHFGSQILAGLLGQPEDGPVVTALYDKLYENFVEEIDAMDNGIAPAAGEPRYALSTTLSARVGHLNPRWNDPDQDTEAGFRRAMELVGSEFLERLDFYHRAWLPARALVEEAVRRRFEVDASGQVLELCQGGCPWKEHLFQLERELALPSPLQLVLFPDRGGQWRVQSVPTAPHSFQSRLPLPEAWRGLRDEALSELAGIPGCVFVHASGFIGGNRTREGALEMARRALELGRGTEST
SIO_010081: MYG1
subclass of: SO_0000673
so part of: MYG1
location: complement(join(805745..805925,806002..806183,806433..806555,806627..806776,806921..807080,807147..807259,807577..807732))
location: region:805745-807732:-1
so has part: feature:807577-807732:-1:exon
so has part: feature:807147-807259:-1:exon
so has part: feature:806921-807080:-1:exon
so has part: feature:806627-806776:-1:exon
so has part: feature:806433-806555:-1:exon
so has part: feature:806002-806183:-1:exon
so has part: feature:805745-805925:-1:exon

XP_039944398.1
type: Protein
SIO_000068: ncbiprotein

position:805745:-1
position: 805745
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:807577-807732:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:807147-807259:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:806921-807080:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:806627-806776:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:806433-806555:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:806002-806183:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:805745-805925:-1:exon

VDR
type: Gene
subclass of: SO_0000704
RO_0002162: 43150
gene: VDR
note: vitamin D receptor; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(808313..827055)
location: region:808313-827055:-1
so has part: feature:808313-827055:-1:exon
subclass of: SO_0000010

120764466
type: Gene
SIO_000068: ncbigene

position:808313:-1
position: 808313
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:827055:-1
position: 827055
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:808313-827055:-1:exon

VDR
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 43150
gene: VDR
product: vitamin D receptor, transcript variant X2
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_040088451.2
SIO_010081: VDR
subclass of: SO_0000673
so part of: VDR
location: complement(join(808313..809269,810081..810197,810526..810677,810931..811102,811663..811786,811904..812088,815765..815895,818299..818449,824363..824414,827035..827055))
location: region:808313-827055:-1
so has part: feature:827035-827055:-1:exon
so has part: feature:824363-824414:-1:exon
so has part: feature:818299-818449:-1:exon
so has part: feature:815765-815895:-1:exon
so has part: feature:811904-812088:-1:exon
so has part: feature:811663-811786:-1:exon
so has part: feature:810931-811102:-1:exon
so has part: feature:810526-810677:-1:exon
so has part: feature:810081-810197:-1:exon
so has part: feature:808313-809269:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:827035-827055:-1:exon

position:827035:-1
position: 827035
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:824363-824414:-1:exon

position:824363:-1
position: 824363
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:824414:-1
position: 824414
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:818299-818449:-1:exon

position:818299:-1
position: 818299
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:818449:-1
position: 818449
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:815765-815895:-1:exon

position:815765:-1
position: 815765
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:815895:-1
position: 815895
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:811904-812088:-1:exon

position:811904:-1
position: 811904
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:812088:-1
position: 812088
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:811663-811786:-1:exon

position:811663:-1
position: 811663
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:811786:-1
position: 811786
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:810931-811102:-1:exon

position:810931:-1
position: 810931
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:811102:-1
position: 811102
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:810526-810677:-1:exon

position:810526:-1
position: 810526
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:810677:-1
position: 810677
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:810081-810197:-1:exon

position:810081:-1
position: 810081
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:810197:-1
position: 810197
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:808313-809269:-1:exon

position:809269:-1
position: 809269
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

VDR
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 43150
gene: VDR
product: vitamin D receptor, transcript variant X1
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_040088450.2
SIO_010081: VDR
subclass of: SO_0000673
so part of: VDR
location: complement(join(808313..809269,810081..810197,810526..810677,810931..811102,811663..811786,811904..812088,815765..815895,818299..818449,824363..824414,825348..825366))
location: region:808313-825366:-1
so has part: feature:825348-825366:-1:exon
so has part: feature:824363-824414:-1:exon
so has part: feature:818299-818449:-1:exon
so has part: feature:815765-815895:-1:exon
so has part: feature:811904-812088:-1:exon
so has part: feature:811663-811786:-1:exon
so has part: feature:810931-811102:-1:exon
so has part: feature:810526-810677:-1:exon
so has part: feature:810081-810197:-1:exon
so has part: feature:808313-809269:-1:exon

position:825366:-1
position: 825366
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:825348-825366:-1:exon

position:825348:-1
position: 825348
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:824363-824414:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:818299-818449:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:815765-815895:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:811904-812088:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:811663-811786:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:810931-811102:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:810526-810677:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:810081-810197:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:808313-809269:-1:exon

VDR
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 43150
gene: VDR
product: vitamin D receptor, transcript variant X3
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_040088452.2
SIO_010081: VDR
subclass of: SO_0000673
so part of: VDR
location: complement(join(808313..809269,810081..810197,810526..810677,810931..811102,811663..811786,811904..812088,815765..815895,818299..818449,823970..824179,824363..824414))
location: region:808313-824414:-1
so has part: feature:824363-824414:-1:exon
so has part: feature:823970-824179:-1:exon
so has part: feature:818299-818449:-1:exon
so has part: feature:815765-815895:-1:exon
so has part: feature:811904-812088:-1:exon
so has part: feature:811663-811786:-1:exon
so has part: feature:810931-811102:-1:exon
so has part: feature:810526-810677:-1:exon
so has part: feature:810081-810197:-1:exon
so has part: feature:808313-809269:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:824363-824414:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:823970-824179:-1:exon

position:823970:-1
position: 823970
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:824179:-1
position: 824179
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:818299-818449:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:815765-815895:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:811904-812088:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:811663-811786:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:810931-811102:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:810526-810677:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:810081-810197:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:808313-809269:-1:exon

VDR
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 43150
gene: VDR
product: vitamin D receptor, transcript variant X4
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_058423811.1
SIO_010081: VDR
subclass of: SO_0000673
so part of: VDR
location: complement(join(808313..809269,810081..810197,810526..810677,810931..811102,811663..811786,811904..812088,815765..815895,818299..818449,824247..824363))
location: region:808313-824363:-1
so has part: feature:824247-824363:-1:exon
so has part: feature:818299-818449:-1:exon
so has part: feature:815765-815895:-1:exon
so has part: feature:811904-812088:-1:exon
so has part: feature:811663-811786:-1:exon
so has part: feature:810931-811102:-1:exon
so has part: feature:810526-810677:-1:exon
so has part: feature:810081-810197:-1:exon
so has part: feature:808313-809269:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:824247-824363:-1:exon

position:824247:-1
position: 824247
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:818299-818449:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:815765-815895:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:811904-812088:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:811663-811786:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:810931-811102:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:810526-810677:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:810081-810197:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:808313-809269:-1:exon

VDR
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 43150
gene: VDR
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: vitamin D3 receptor
translation: MDPGASSTSLADPGGDSERNLPRICGVCGDRATGFHFNAMTCEGCKGFFRRSMKRKAMFTCPFNGDCHITKDNRRHCQACRLKRCVDIGMMKEFILTDEEVQRKREMILKRKEEEALRESLKPKLSEEQQKVIDVLLEAHRKTYDPTYADFTKFRPPVRSHPSSRGATKTSSLLTQDLSSEDSSDLFGSEVFSTFPDSVEPPPFPGLALPEEQDESSSMNLEFSQLSMLPHLADLVSYSIQKVVGFAKMIPGFRDLSAEDQIVLLKCSAMEVIMLRSNQSFTLEDMSWTCGSSDFKYRVSDVTQAGHSMDLLEPLVKFQVGLKKLNLHEEEHVLLMAICILSPDRPGVREPLRVEALQERLSEVLQSYIRARHPPPGSRLLYAKMIQKLADLRSLNEEHSRQYRCLSFQPEHSMQLTPLLLEVFGNEIS
SIO_010081: VDR
subclass of: SO_0000673
so part of: VDR
location: complement(join(809010..809269,810081..810197,810526..810677,810931..811102,811663..811786,811904..812088,815765..815895,818299..818447))
location: region:809010-818447:-1
so has part: feature:818299-818447:-1:exon
so has part: feature:815765-815895:-1:exon
so has part: feature:811904-812088:-1:exon
so has part: feature:811663-811786:-1:exon
so has part: feature:810931-811102:-1:exon
so has part: feature:810526-810677:-1:exon
so has part: feature:810081-810197:-1:exon
so has part: feature:809010-809269:-1:exon

XP_039944384.1
type: Protein
SIO_000068: ncbiprotein

position:809010:-1
position: 809010
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:818447:-1
position: 818447
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:818299-818447:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:815765-815895:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:811904-812088:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:811663-811786:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:810931-811102:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:810526-810677:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:810081-810197:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:809010-809269:-1:exon

VDR
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 43150
gene: VDR
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: vitamin D3 receptor
translation: MDPGASSTSLADPGGDSERNLPRICGVCGDRATGFHFNAMTCEGCKGFFRRSMKRKAMFTCPFNGDCHITKDNRRHCQACRLKRCVDIGMMKEFILTDEEVQRKREMILKRKEEEALRESLKPKLSEEQQKVIDVLLEAHRKTYDPTYADFTKFRPPVRSHPSSRGATKTSSLLTQDLSSEDSSDLFGSEVFSTFPDSVEPPPFPGLALPEEQDESSSMNLEFSQLSMLPHLADLVSYSIQKVVGFAKMIPGFRDLSAEDQIVLLKCSAMEVIMLRSNQSFTLEDMSWTCGSSDFKYRVSDVTQAGHSMDLLEPLVKFQVGLKKLNLHEEEHVLLMAICILSPDRPGVREPLRVEALQERLSEVLQSYIRARHPPPGSRLLYAKMIQKLADLRSLNEEHSRQYRCLSFQPEHSMQLTPLLLEVFGNEIS
SIO_010081: VDR
subclass of: SO_0000673
so part of: VDR
location: complement(join(809010..809269,810081..810197,810526..810677,810931..811102,811663..811786,811904..812088,815765..815895,818299..818447))
location: region:809010-818447:-1
so has part: feature:818299-818447:-1:exon
so has part: feature:815765-815895:-1:exon
so has part: feature:811904-812088:-1:exon
so has part: feature:811663-811786:-1:exon
so has part: feature:810931-811102:-1:exon
so has part: feature:810526-810677:-1:exon
so has part: feature:810081-810197:-1:exon
so has part: feature:809010-809269:-1:exon

XP_039944385.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:818299-818447:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:815765-815895:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:811904-812088:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:811663-811786:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:810931-811102:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:810526-810677:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:810081-810197:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:809010-809269:-1:exon

VDR
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 43150
gene: VDR
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: vitamin D3 receptor
translation: MDPGASSTSLADPGGDSERNLPRICGVCGDRATGFHFNAMTCEGCKGFFRRSMKRKAMFTCPFNGDCHITKDNRRHCQACRLKRCVDIGMMKEFILTDEEVQRKREMILKRKEEEALRESLKPKLSEEQQKVIDVLLEAHRKTYDPTYADFTKFRPPVRSHPSSRGATKTSSLLTQDLSSEDSSDLFGSEVFSTFPDSVEPPPFPGLALPEEQDESSSMNLEFSQLSMLPHLADLVSYSIQKVVGFAKMIPGFRDLSAEDQIVLLKCSAMEVIMLRSNQSFTLEDMSWTCGSSDFKYRVSDVTQAGHSMDLLEPLVKFQVGLKKLNLHEEEHVLLMAICILSPDRPGVREPLRVEALQERLSEVLQSYIRARHPPPGSRLLYAKMIQKLADLRSLNEEHSRQYRCLSFQPEHSMQLTPLLLEVFGNEIS
SIO_010081: VDR
subclass of: SO_0000673
so part of: VDR
location: complement(join(809010..809269,810081..810197,810526..810677,810931..811102,811663..811786,811904..812088,815765..815895,818299..818447))
location: region:809010-818447:-1
so has part: feature:818299-818447:-1:exon
so has part: feature:815765-815895:-1:exon
so has part: feature:811904-812088:-1:exon
so has part: feature:811663-811786:-1:exon
so has part: feature:810931-811102:-1:exon
so has part: feature:810526-810677:-1:exon
so has part: feature:810081-810197:-1:exon
so has part: feature:809010-809269:-1:exon

XP_039944386.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:818299-818447:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:815765-815895:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:811904-812088:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:811663-811786:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:810931-811102:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:810526-810677:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:810081-810197:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:809010-809269:-1:exon

VDR
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 43150
gene: VDR
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: vitamin D3 receptor
translation: MDPGASSTSLADPGGDSERNLPRICGVCGDRATGFHFNAMTCEGCKGFFRRSMKRKAMFTCPFNGDCHITKDNRRHCQACRLKRCVDIGMMKEFILTDEEVQRKREMILKRKEEEALRESLKPKLSEEQQKVIDVLLEAHRKTYDPTYADFTKFRPPVRSHPSSRGATKTSSLLTQDLSSEDSSDLFGSEVFSTFPDSVEPPPFPGLALPEEQDESSSMNLEFSQLSMLPHLADLVSYSIQKVVGFAKMIPGFRDLSAEDQIVLLKCSAMEVIMLRSNQSFTLEDMSWTCGSSDFKYRVSDVTQAGHSMDLLEPLVKFQVGLKKLNLHEEEHVLLMAICILSPDRPGVREPLRVEALQERLSEVLQSYIRARHPPPGSRLLYAKMIQKLADLRSLNEEHSRQYRCLSFQPEHSMQLTPLLLEVFGNEIS
SIO_010081: VDR
subclass of: SO_0000673
so part of: VDR
location: complement(join(809010..809269,810081..810197,810526..810677,810931..811102,811663..811786,811904..812088,815765..815895,818299..818447))
location: region:809010-818447:-1
so has part: feature:818299-818447:-1:exon
so has part: feature:815765-815895:-1:exon
so has part: feature:811904-812088:-1:exon
so has part: feature:811663-811786:-1:exon
so has part: feature:810931-811102:-1:exon
so has part: feature:810526-810677:-1:exon
so has part: feature:810081-810197:-1:exon
so has part: feature:809010-809269:-1:exon

XP_058279794.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:818299-818447:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:815765-815895:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:811904-812088:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:811663-811786:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:810931-811102:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:810526-810677:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:810081-810197:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:809010-809269:-1:exon

TMEM106C
type: Gene
subclass of: SO_0000704
RO_0002162: 43150
gene: TMEM106C
note: transmembrane protein 106C; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 830026..834213
location: region:830026-834213:1
so has part: feature:830026-834213:1:exon
subclass of: SO_0000010

120764487
type: Gene
SIO_000068: ncbigene

position:830026:1
position: 830026
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:834213:1
position: 834213
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:830026-834213:1:exon

TMEM106C
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 43150
gene: TMEM106C
product: transmembrane protein 106C, transcript variant X1
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_040088474.1
SIO_010081: TMEM106C
subclass of: SO_0000673
so part of: TMEM106C
location: join(830026..830076,830897..831106,831224..831287,831642..831801,831888..832028,832174..832223,832435..832488,832806..834213)
location: region:830026-834213:1
so has part: feature:830026-830076:1:exon
so has part: feature:830897-831106:1:exon
so has part: feature:831224-831287:1:exon
so has part: feature:831642-831801:1:exon
so has part: feature:831888-832028:1:exon
so has part: feature:832174-832223:1:exon
so has part: feature:832435-832488:1:exon
so has part: feature:832806-834213:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:830026-830076:1:exon

position:830076:1
position: 830076
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:830897-831106:1:exon

position:830897:1
position: 830897
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:831106:1
position: 831106
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:831224-831287:1:exon

position:831224:1
position: 831224
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:831287:1
position: 831287
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:831642-831801:1:exon

position:831642:1
position: 831642
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:831801:1
position: 831801
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:831888-832028:1:exon

position:831888:1
position: 831888
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:832028:1
position: 832028
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:832174-832223:1:exon

position:832174:1
position: 832174
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:832223:1
position: 832223
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:832435-832488:1:exon

position:832435:1
position: 832435
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:832488:1
position: 832488
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:832806-834213:1:exon

position:832806:1
position: 832806
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

TMEM106C
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 43150
gene: TMEM106C
product: transmembrane protein 106C, transcript variant X2
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_040088475.2
SIO_010081: TMEM106C
subclass of: SO_0000673
so part of: TMEM106C
location: join(830524..830552,830897..831106,831224..831287,831642..831801,831888..832028,832174..832223,832435..832488,832806..834213)
location: region:830524-834213:1
so has part: feature:830524-830552:1:exon
so has part: feature:830897-831106:1:exon
so has part: feature:831224-831287:1:exon
so has part: feature:831642-831801:1:exon
so has part: feature:831888-832028:1:exon
so has part: feature:832174-832223:1:exon
so has part: feature:832435-832488:1:exon
so has part: feature:832806-834213:1:exon

position:830524:1
position: 830524
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:830524-830552:1:exon

position:830552:1
position: 830552
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:830897-831106:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:831224-831287:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:831642-831801:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:831888-832028:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:832174-832223:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:832435-832488:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:832806-834213:1:exon

TMEM106C
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 43150
gene: TMEM106C
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transmembrane protein 106C
translation: MGSVRSLSAVSAAPSRGKLRDEEDEDLLSGQEPVEDMAKIPYMEFMGQESVTCHTCRGTGRIPTEQMNELVALIPHSDQRLRPQRTKLYVLLSVLLCLLLSGLGIFFLFPHSVLVDDGGIKVVRVWFDRENSTVLLAITATLRIRNSNFYSVTVSSLSSQVQYMNTVVGSQQLAGVSSIQPLRDKLVNFTVKAELGGSLSYVYFFCTLPKVKVHNIVILMRTSVKLSYIGRSAQSTLETFHYLDCSSNSTAPLPPLAWGAP
SIO_010081: TMEM106C
subclass of: SO_0000673
so part of: TMEM106C
location: join(830914..831106,831224..831287,831642..831801,831888..832028,832174..832223,832435..832488,832806..832929)
location: region:830914-832929:1
so has part: feature:830914-831106:1:exon
so has part: feature:831224-831287:1:exon
so has part: feature:831642-831801:1:exon
so has part: feature:831888-832028:1:exon
so has part: feature:832174-832223:1:exon
so has part: feature:832435-832488:1:exon
so has part: feature:832806-832929:1:exon

XP_039944408.1
type: Protein
SIO_000068: ncbiprotein

position:830914:1
position: 830914
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:832929:1
position: 832929
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:830914-831106:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:831224-831287:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:831642-831801:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:831888-832028:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:832174-832223:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:832435-832488:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:832806-832929:1:exon

TMEM106C
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 43150
gene: TMEM106C
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transmembrane protein 106C
translation: MGSVRSLSAVSAAPSRGKLRDEEDEDLLSGQEPVEDMAKIPYMEFMGQESVTCHTCRGTGRIPTEQMNELVALIPHSDQRLRPQRTKLYVLLSVLLCLLLSGLGIFFLFPHSVLVDDGGIKVVRVWFDRENSTVLLAITATLRIRNSNFYSVTVSSLSSQVQYMNTVVGSQQLAGVSSIQPLRDKLVNFTVKAELGGSLSYVYFFCTLPKVKVHNIVILMRTSVKLSYIGRSAQSTLETFHYLDCSSNSTAPLPPLAWGAP
SIO_010081: TMEM106C
subclass of: SO_0000673
so part of: TMEM106C
location: join(830914..831106,831224..831287,831642..831801,831888..832028,832174..832223,832435..832488,832806..832929)
location: region:830914-832929:1
so has part: feature:830914-831106:1:exon
so has part: feature:831224-831287:1:exon
so has part: feature:831642-831801:1:exon
so has part: feature:831888-832028:1:exon
so has part: feature:832174-832223:1:exon
so has part: feature:832435-832488:1:exon
so has part: feature:832806-832929:1:exon

XP_039944409.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:830914-831106:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:831224-831287:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:831642-831801:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:831888-832028:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:832174-832223:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:832435-832488:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:832806-832929:1:exon

COL2A1
type: Gene
subclass of: SO_0000704
RO_0002162: 43150
gene: COL2A1
note: collagen type II alpha 1 chain; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(836172..861519)
location: region:836172-861519:-1
so has part: feature:836172-861519:-1:exon
subclass of: SO_0000010

120764383
type: Gene
SIO_000068: ncbigene

position:836172:-1
position: 836172
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:861519:-1
position: 861519
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:836172-861519:-1:exon

COL2A1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 43150
gene: COL2A1
product: collagen type II alpha 1 chain
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 ESTs, 45 Proteins
transcript id: XM_040088336.1
SIO_010081: COL2A1
subclass of: SO_0000673
so part of: COL2A1
location: complement(join(836172..836921,837802..838044,839641..839828,840612..840900,841352..841459,841579..841632,841751..841858,841965..842018,842546..842653,842776..842829,843009..843116,844017..844124,844204..844365,845239..845292,845366..845419,845536..845643,845714..845767,845850..845903,846355..846408,846688..846741,846830..846937,847033..847131,847972..848016,848106..848159,848644..848697,848886..848939,849096..849149,849234..849332,849978..850031,850767..850865,851315..851368,852011..852118,853512..853565,854022..854120,854693..854737,854880..854978,855080..855133,855217..855261,855377..855430,855542..855586,855681..855734,855828..855886,856082..856130,856314..856367,856454..856507,856591..856635,857109..857186,857883..857984,858227..858280,858429..858461,858584..858616,859145..859161,859812..860012,861381..861519))
location: region:836172-861519:-1
so has part: feature:861381-861519:-1:exon
so has part: feature:859812-860012:-1:exon
so has part: feature:859145-859161:-1:exon
so has part: feature:858584-858616:-1:exon
so has part: feature:858429-858461:-1:exon
so has part: feature:858227-858280:-1:exon
so has part: feature:857883-857984:-1:exon
so has part: feature:857109-857186:-1:exon
so has part: feature:856591-856635:-1:exon
so has part: feature:856454-856507:-1:exon
so has part: feature:856314-856367:-1:exon
so has part: feature:856082-856130:-1:exon
so has part: feature:855828-855886:-1:exon
so has part: feature:855681-855734:-1:exon
so has part: feature:855542-855586:-1:exon
so has part: feature:855377-855430:-1:exon
so has part: feature:855217-855261:-1:exon
so has part: feature:855080-855133:-1:exon
so has part: feature:854880-854978:-1:exon
so has part: feature:854693-854737:-1:exon
so has part: feature:854022-854120:-1:exon
so has part: feature:853512-853565:-1:exon
so has part: feature:852011-852118:-1:exon
so has part: feature:851315-851368:-1:exon
so has part: feature:850767-850865:-1:exon
so has part: feature:849978-850031:-1:exon
so has part: feature:849234-849332:-1:exon
so has part: feature:849096-849149:-1:exon
so has part: feature:848886-848939:-1:exon
so has part: feature:848644-848697:-1:exon
so has part: feature:848106-848159:-1:exon
so has part: feature:847972-848016:-1:exon
so has part: feature:847033-847131:-1:exon
so has part: feature:846830-846937:-1:exon
so has part: feature:846688-846741:-1:exon
so has part: feature:846355-846408:-1:exon
so has part: feature:845850-845903:-1:exon
so has part: feature:845714-845767:-1:exon
so has part: feature:845536-845643:-1:exon
so has part: feature:845366-845419:-1:exon
so has part: feature:845239-845292:-1:exon
so has part: feature:844204-844365:-1:exon
so has part: feature:844017-844124:-1:exon
so has part: feature:843009-843116:-1:exon
so has part: feature:842776-842829:-1:exon
so has part: feature:842546-842653:-1:exon
so has part: feature:841965-842018:-1:exon
so has part: feature:841751-841858:-1:exon
so has part: feature:841579-841632:-1:exon
so has part: feature:841352-841459:-1:exon
so has part: feature:840612-840900:-1:exon
so has part: feature:839641-839828:-1:exon
so has part: feature:837802-838044:-1:exon
so has part: feature:836172-836921:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:861381-861519:-1:exon

position:861381:-1
position: 861381
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:859812-860012:-1:exon

position:859812:-1
position: 859812
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:860012:-1
position: 860012
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:859145-859161:-1:exon

position:859145:-1
position: 859145
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:859161:-1
position: 859161
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:858584-858616:-1:exon

position:858584:-1
position: 858584
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:858616:-1
position: 858616
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:858429-858461:-1:exon

position:858429:-1
position: 858429
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:858461:-1
position: 858461
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:858227-858280:-1:exon

position:858227:-1
position: 858227
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:858280:-1
position: 858280
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:857883-857984:-1:exon

position:857883:-1
position: 857883
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:857984:-1
position: 857984
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:857109-857186:-1:exon

position:857109:-1
position: 857109
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:857186:-1
position: 857186
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:856591-856635:-1:exon

position:856591:-1
position: 856591
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:856635:-1
position: 856635
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:856454-856507:-1:exon

position:856454:-1
position: 856454
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:856507:-1
position: 856507
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:856314-856367:-1:exon

position:856314:-1
position: 856314
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:856367:-1
position: 856367
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:856082-856130:-1:exon

position:856082:-1
position: 856082
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:856130:-1
position: 856130
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:855828-855886:-1:exon

position:855828:-1
position: 855828
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:855886:-1
position: 855886
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:855681-855734:-1:exon

position:855681:-1
position: 855681
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:855734:-1
position: 855734
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:855542-855586:-1:exon

position:855542:-1
position: 855542
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:855586:-1
position: 855586
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:855377-855430:-1:exon

position:855377:-1
position: 855377
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:855430:-1
position: 855430
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:855217-855261:-1:exon

position:855217:-1
position: 855217
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:855261:-1
position: 855261
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:855080-855133:-1:exon