Hirundo rustica isolate bHirRus1 chromosome 29, bHirRus1.pri.v3, whole genome shotgun sequence.
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Passeriformes; Sylvioidea; Hirundinidae; Hirundo.
REFSEQ INFORMATION: The reference sequence is identical to\nCM026875.1.\nAssembly name: bHirRus1.pri.v3\nThe genomic sequence for this RefSeq record is from the\nwhole-genome assembly released by the Vertebrate Genomes Project on\n2021/11/30. The original whole-genome shotgun project has the\naccession JADDRP000000000.3.\n\n##Genome-Assembly-Data-START##\nAssembly Provider :: Vertebrate Genomes Project\nAssembly Date :: 20-AUG-2021\nAssembly Method :: FALCON v. DX 2.0.1; FALCON-Unzip v. DX\n 1.2.1; purge_dups v. DX 19-08-10;\n scaff10X v. DX 2.0.3; bionano Solve v. DX\n 3.4.0; Salsa2 HiC v. DX 2.2.0; Arrow\n polishing and gap filling v. DX 7.0.1.1;\n Longranger Align v. DX 2.2.2.1; freebayes\n v. DX 19-07-11; gEVAL manual curation v.\n 2020-02-11; VGP assembly pipeline v. 1.6;\n Manual Curation BUSCO v. 2021-01-11;\n Manual Curation v. 2021-08-20\nAssembly Name :: bHirRus1.pri.v3\nDiploid :: Principal Pseudohaplotype\nGenome Representation :: Full\nExpected Final Version :: No\nGenome Coverage :: 51.15x\nSequencing Technology :: PacBio Sequel I CLR; Illumina NovaSeq;\n Arima Genomics Hi-C; Bionano Genomics DLS\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI RefSeq\nAnnotation Status :: Full annotation\nAnnotation Name :: GCF_015227805.2-RS_2023_07\nAnnotation Pipeline :: NCBI eukaryotic genome annotation\n pipeline\nAnnotation Software Version :: 10.1\nAnnotation Method :: Gnomon; cmsearch; tRNAscan-SE\nFeatures Annotated :: Gene; mRNA; CDS; ncRNA\nAnnotation Date :: 07/19/2023\n##Genome-Annotation-Data-END##
Fc receptor-like protein 3; Derived by automated computational analysis using gene prediction method: Gnomon.
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 Proteins
Derived by automated computational analysis using gene prediction method: Gnomon.
translocon-associated protein subunit beta; Derived by automated computational analysis using gene prediction method: Gnomon.
translocon-associated protein subunit beta, transcript variant X2
COORDINATES: polyA evidence [ECO:0006239]
translocon-associated protein subunit beta, transcript variant X3
translocon-associated protein subunit beta, transcript variant X1
translocon-associated protein subunit beta
chaperonin containing TCP1 subunit 3; Derived by automated computational analysis using gene prediction method: Gnomon.
translocon-associated protein subunit beta isoform X1
translocon-associated protein subunit beta isoform X2
translocon-associated protein subunit beta-like; Derived by automated computational analysis using gene prediction method: Gnomon.
translocon-associated protein subunit beta-like
zinc finger and BTB domain containing 7B; Derived by automated computational analysis using gene prediction method: Gnomon.
zinc finger and BTB domain containing 7B, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 Proteins
zinc finger and BTB domain containing 7B, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 13 Proteins
zinc finger and BTB domain-containing protein 7B
mothers against decapentaplegic homolog 6-like; Derived by automated computational analysis using gene prediction method: Gnomon.
mothers against decapentaplegic homolog 6-like
flavin adenine dinucleotide synthetase 1; Derived by automated computational analysis using gene prediction method: Gnomon.
flavin adenine dinucleotide synthetase 1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins
CDC28 protein kinase regulatory subunit 1B; Derived by automated computational analysis using gene prediction method: Gnomon.
CDC28 protein kinase regulatory subunit 1B, transcript variant X2
CDC28 protein kinase regulatory subunit 1B, transcript variant X1
cyclin-dependent kinases regulatory subunit 1 isoform X2
cyclin-dependent kinases regulatory subunit 1 isoform X1
SHC adaptor protein 1; Derived by automated computational analysis using gene prediction method: Gnomon.
SHC adaptor protein 1, transcript variant X8
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 1 long SRA read, 8 Proteins
SHC adaptor protein 1, transcript variant X6
SHC adaptor protein 1, transcript variant X9
SHC adaptor protein 1, transcript variant X7
SHC adaptor protein 1, transcript variant X5
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 1 long SRA read, 10 Proteins
SHC adaptor protein 1, transcript variant X4
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 1 long SRA read, 9 Proteins
SHC adaptor protein 1, transcript variant X2
SHC adaptor protein 1, transcript variant X3
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 1 long SRA read, 23 Proteins
SHC adaptor protein 1, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 1 long SRA read, 11 Proteins
pygopus family PHD finger 2; Derived by automated computational analysis using gene prediction method: Gnomon.
PBX homeobox interacting protein 1; Derived by automated computational analysis using gene prediction method: Gnomon.
PBX homeobox interacting protein 1, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 4 Proteins
PBX homeobox interacting protein 1, transcript variant X2
pre-B-cell leukemia transcription factor-interacting protein 1
potassium calcium-activated channel subfamily N member 3; Derived by automated computational analysis using gene prediction method: Gnomon.
potassium calcium-activated channel subfamily N member 3
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 28 Proteins
small conductance calcium-activated potassium channel protein 3
adenosine deaminase RNA specific; Derived by automated computational analysis using gene prediction method: Gnomon.
adenosine deaminase RNA specific, transcript variant X3
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 ESTs, 1 long SRA read
adenosine deaminase RNA specific, transcript variant X4
adenosine deaminase RNA specific, transcript variant X2
adenosine deaminase RNA specific, transcript variant X1
adenosine deaminase RNA specific, transcript variant X6
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 ESTs, 1 long SRA read, 3 Proteins
adenosine deaminase RNA specific, transcript variant X5
double-stranded RNA-specific adenosine deaminase isoform X1
double-stranded RNA-specific adenosine deaminase isoform X2
cholinergic receptor nicotinic beta 2 subunit; Derived by automated computational analysis using gene prediction method: Gnomon.
cholinergic receptor nicotinic beta 2 subunit
neuronal acetylcholine receptor subunit beta-2
ubiquitin conjugating enzyme E2 Q1; Derived by automated computational analysis using gene prediction method: Gnomon.
Src homology 2 domain containing E; Derived by automated computational analysis using gene prediction method: Gnomon.
interleukin 6 receptor; Derived by automated computational analysis using gene prediction method: Gnomon.
interleukin 6 receptor, transcript variant X5
interleukin 6 receptor, transcript variant X4
interleukin 6 receptor, transcript variant X3
interleukin 6 receptor, transcript variant X2
interleukin 6 receptor, transcript variant X1
interleukin 6 receptor, transcript variant X6
interleukin-6 receptor subunit alpha isoform X6
interleukin-6 receptor subunit alpha isoform X5
interleukin-6 receptor subunit alpha isoform X4
interleukin-6 receptor subunit alpha isoform X3
interleukin-6 receptor subunit alpha isoform X2
interleukin-6 receptor subunit alpha isoform X1
ATPase phospholipid transporting 8B2; Derived by automated computational analysis using gene prediction method: Gnomon.
ATPase phospholipid transporting 8B2, transcript variant X4
ATPase phospholipid transporting 8B2, transcript variant X2
ATPase phospholipid transporting 8B2, transcript variant X3
ATPase phospholipid transporting 8B2, transcript variant X1
ATPase phospholipid transporting 8B2, transcript variant X5
ATPase phospholipid transporting 8B2, transcript variant X7
ATPase phospholipid transporting 8B2, transcript variant X6
phospholipid-transporting ATPase ID isoform X4
phospholipid-transporting ATPase ID isoform X2
phospholipid-transporting ATPase ID isoform X3
phospholipid-transporting ATPase ID isoform X1
phospholipid-transporting ATPase ID isoform X5
phospholipid-transporting ATPase ID isoform X6
aquaporin 10; Derived by automated computational analysis using gene prediction method: Gnomon.
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 23 Proteins
HCLS1 associated protein X-1; Derived by automated computational analysis using gene prediction method: Gnomon.
The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon
The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
LOW QUALITY PROTEIN: HCLS1-associated protein X-1
ubiquitin associated protein 2 like; Derived by automated computational analysis using gene prediction method: Gnomon.
ubiquitin associated protein 2 like, transcript variant X4
ubiquitin associated protein 2 like, transcript variant X3
ubiquitin associated protein 2 like, transcript variant X1
ubiquitin associated protein 2 like, transcript variant X2
ubiquitin-associated protein 2-like isoform X3
ubiquitin-associated protein 2-like isoform X2
ubiquitin-associated protein 2-like isoform X1
chromosome 29 C1orf43 homolog; Derived by automated computational analysis using gene prediction method: Gnomon.
tropomyosin alpha-3 chain-like; Derived by automated computational analysis using gene prediction method: Gnomon.
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein
tropomyosin alpha-3 chain; Derived by automated computational analysis using gene prediction method: Gnomon.
tropomyosin alpha-3 chain, transcript variant X6
tropomyosin alpha-3 chain, transcript variant X18
tropomyosin alpha-3 chain, transcript variant X16
tropomyosin alpha-3 chain, transcript variant X15
tropomyosin alpha-3 chain, transcript variant X14
tropomyosin alpha-3 chain, transcript variant X5
tropomyosin alpha-3 chain, transcript variant X17
tropomyosin alpha-3 chain, transcript variant X13
tropomyosin alpha-3 chain, transcript variant X12
tropomyosin alpha-3 chain, transcript variant X11
tropomyosin alpha-3 chain, transcript variant X2
tropomyosin alpha-3 chain, transcript variant X1
tropomyosin alpha-3 chain, transcript variant X10
tropomyosin alpha-3 chain, transcript variant X3
tropomyosin alpha-3 chain, transcript variant X4
tropomyosin alpha-3 chain, transcript variant X9
tropomyosin alpha-3 chain, transcript variant X8
tropomyosin alpha-3 chain, transcript variant X7
transmembrane protein 79; Derived by automated computational analysis using gene prediction method: Gnomon.
transmembrane protein 79, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins
transmembrane protein 79, transcript variant X2
SMG5 nonsense mediated mRNA decay factor; Derived by automated computational analysis using gene prediction method: Gnomon.
SMG5 nonsense mediated mRNA decay factor
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 long SRA reads, 5 Proteins
nonsense-mediated mRNA decay factor SMG5
bone gamma-carboxyglutamate protein; Derived by automated computational analysis using gene prediction method: Gnomon.
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins
polyamine modulated factor 1; Derived by automated computational analysis using gene prediction method: Gnomon.
solute carrier family 25 member 44; Derived by automated computational analysis using gene prediction method: Gnomon.
semaphorin 4A; Derived by automated computational analysis using gene prediction method: Gnomon.
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 20 Proteins
lamin A/C; Derived by automated computational analysis using gene prediction method: Gnomon.
mex-3 RNA binding family member A; Derived by automated computational analysis using gene prediction method: Gnomon.
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 ESTs, 13 Proteins
ras-related protein Rab-11A-like; Derived by automated computational analysis using gene prediction method: Gnomon.
RAB25, member RAS oncogene family; Derived by automated computational analysis using gene prediction method: Gnomon.
RAB25, member RAS oncogene family, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 68 Proteins
RAB25, member RAS oncogene family, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 82 Proteins
late endosomal/lysosomal adaptor, MAPK and MTOR activator 2; Derived by automated computational analysis using gene prediction method: Gnomon.
late endosomal/lysosomal adaptor, MAPK and MTOR activator 2
ubiquilin 4; Derived by automated computational analysis using gene prediction method: Gnomon.
G patch domain-containing protein 4; Derived by automated computational analysis using gene prediction method: Gnomon.
NAD(P)HX epimerase; Derived by automated computational analysis using gene prediction method: Gnomon.
tetratricopeptide repeat domain 24; Derived by automated computational analysis using gene prediction method: Gnomon.
tetratricopeptide repeat domain 24, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins
tetratricopeptide repeat domain 24, transcript variant X1
tetratricopeptide repeat protein 24 isoform X2
tetratricopeptide repeat protein 24 isoform X1
tetratricopeptide repeat domain 24, transcript variant X3
tetratricopeptide repeat domain 24, transcript variant X4
tetratricopeptide repeat protein 24 isoform X3
IQ motif containing GTPase activating protein 3; Derived by automated computational analysis using gene prediction method: Gnomon.
IQ motif containing GTPase activating protein 3, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 long SRA reads, 2 Proteins
ras GTPase-activating-like protein IQGAP3 isoform X1
IQ motif containing GTPase activating protein 3, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 long SRA reads, 2 Proteins
ras GTPase-activating-like protein IQGAP3 isoform X2
myocyte enhancer factor 2D; Derived by automated computational analysis using gene prediction method: Gnomon.
myocyte enhancer factor 2D, transcript variant X10
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins
myocyte enhancer factor 2D, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 11 Proteins
myocyte enhancer factor 2D, transcript variant X9
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 13 Proteins
myocyte enhancer factor 2D, transcript variant X8
myocyte enhancer factor 2D, transcript variant X11
myocyte enhancer factor 2D, transcript variant X6
myocyte enhancer factor 2D, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 ESTs, 1 long SRA read, 11 Proteins
myocyte enhancer factor 2D, transcript variant X5
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 ESTs, 11 Proteins
myocyte enhancer factor 2D, transcript variant X3
myocyte enhancer factor 2D, transcript variant X7
myocyte enhancer factor 2D, transcript variant X4
myocyte-specific enhancer factor 2D isoform X4
myocyte-specific enhancer factor 2D isoform X1
myocyte-specific enhancer factor 2D isoform X3
myocyte-specific enhancer factor 2D isoform X2
myocyte-specific enhancer factor 2D isoform X5
uncharacterized LOC120764322; Derived by automated computational analysis using gene prediction method: Gnomon.
uncharacterized LOC120764349; Derived by automated computational analysis using gene prediction method: Gnomon.
uncharacterized LOC120764349, transcript variant X2
uncharacterized LOC120764349, transcript variant X1
DC-STAMP domain-containing protein 2-like; Derived by automated computational analysis using gene prediction method: Gnomon.
DC-STAMP domain-containing protein 2-like
ADAM metallopeptidase domain 15; Derived by automated computational analysis using gene prediction method: Gnomon.
ADAM metallopeptidase domain 15, transcript variant X8
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 17 Proteins
disintegrin and metalloproteinase domain-containing protein 15 isoform X2
ADAM metallopeptidase domain 15, transcript variant X2
ADAM metallopeptidase domain 15, transcript variant X1
ADAM metallopeptidase domain 15, transcript variant X4
ADAM metallopeptidase domain 15, transcript variant X6
ADAM metallopeptidase domain 15, transcript variant X3
ADAM metallopeptidase domain 15, transcript variant X5
ADAM metallopeptidase domain 15, transcript variant X7
ADAM metallopeptidase domain 15, transcript variant X9
disintegrin and metalloproteinase domain-containing protein 15 isoform X1
disintegrin and metalloproteinase domain-containing protein 15 isoform X3
ephrin A3; Derived by automated computational analysis using gene prediction method: Gnomon.
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 22 Proteins
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins
ephrin A1; Derived by automated computational analysis using gene prediction method: Gnomon.
solute carrier family 50 member 1; Derived by automated computational analysis using gene prediction method: Gnomon.
solute carrier family 50 member 1, transcript variant X1
solute carrier family 50 member 1, transcript variant X2
dolichyl-phosphate mannosyltransferase subunit 3, regulatory; Derived by automated computational analysis using gene prediction method: Gnomon.
dolichyl-phosphate mannosyltransferase subunit 3, regulatory
dolichol-phosphate mannosyltransferase subunit 3
keratinocyte associated protein 2; Derived by automated computational analysis using gene prediction method: Gnomon.
tripartite motif containing 46; Derived by automated computational analysis using gene prediction method: Gnomon.
tripartite motif containing 46, transcript variant X1
tripartite motif containing 46, transcript variant X2
tripartite motif-containing protein 46 isoform X1
tripartite motif-containing protein 46 isoform X2
mucin 1, cell surface associated; Derived by automated computational analysis using gene prediction method: Gnomon.
mucin 1, cell surface associated, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 14 Proteins
mucin 1, cell surface associated, transcript variant X1
thrombospondin 3; Derived by automated computational analysis using gene prediction method: Gnomon.
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 33 Proteins
metaxin 1; Derived by automated computational analysis using gene prediction method: Gnomon.
lysosomal acid glucosylceramidase-like; Derived by automated computational analysis using gene prediction method: Gnomon.
The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 2 bases in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 22 Proteins
The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 2 bases in 1 codon; substituted 2 bases at 2 genomic stop codons; Derived by automated computational analysis using gene prediction method: Gnomon.
LOW QUALITY PROTEIN: lysosomal acid glucosylceramidase-like
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 21 Proteins
endosomal transmembrane epsin interactor 3; Derived by automated computational analysis using gene prediction method: Gnomon.
endosomal transmembrane epsin interactor 3
secretory carrier membrane protein 3; Derived by automated computational analysis using gene prediction method: Gnomon.
secretory carrier-associated membrane protein 3
uncharacterized LOC120764346; Derived by automated computational analysis using gene prediction method: Gnomon.
CDC like kinase 2; Derived by automated computational analysis using gene prediction method: Gnomon.
CDC like kinase 2, transcript variant X2
CDC like kinase 2, transcript variant X1
dual specificity protein kinase CLK2 isoform X2
dual specificity protein kinase CLK2 isoform X1
hyperpolarization activated cyclic nucleotide gated potassium channel 3; Derived by automated computational analysis using gene prediction method: Gnomon.
hyperpolarization activated cyclic nucleotide gated potassium channel 3
potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 3
farnesyl diphosphate synthase; Derived by automated computational analysis using gene prediction method: Gnomon.
RUN and SH3 domain containing 1; Derived by automated computational analysis using gene prediction method: Gnomon.
ASH1 like histone lysine methyltransferase; Derived by automated computational analysis using gene prediction method: Gnomon.
ASH1 like histone lysine methyltransferase, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 13 ESTs, 1 long SRA read, 9 Proteins
ASH1 like histone lysine methyltransferase, transcript variant X3
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 16 ESTs, 1 long SRA read, 7 Proteins
ASH1 like histone lysine methyltransferase, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 13 ESTs, 9 Proteins
histone-lysine N-methyltransferase ASH1L isoform X2
histone-lysine N-methyltransferase ASH1L isoform X1
death associated protein 3; Derived by automated computational analysis using gene prediction method: Gnomon.
misato mitochondrial distribution and morphology regulator 1; Derived by automated computational analysis using gene prediction method: Gnomon.
misato mitochondrial distribution and morphology regulator 1
GON-4-like protein; Derived by automated computational analysis using gene prediction method: Gnomon.
GON-4-like protein, transcript variant X3
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 ESTs, 13 Proteins
GON-4-like protein, transcript variant X4
GON-4-like protein, transcript variant X1
GON-4-like protein, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 ESTs, 6 Proteins
synaptotagmin 11; Derived by automated computational analysis using gene prediction method: Gnomon.
Ras like without CAAX 1; Derived by automated computational analysis using gene prediction method: Gnomon.
KH domain containing 4, pre-mRNA splicing factor; Derived by automated computational analysis using gene prediction method: Gnomon.
KH domain containing 4, pre-mRNA splicing factor
small Cajal body-specific RNA 4; Derived by automated computational analysis using gene prediction method: cmsearch.
COORDINATES: nucleotide motif:Rfam:14.6:RF00423
Derived by automated computational analysis using gene prediction method: cmsearch.
HORMA domain containing 1; Derived by automated computational analysis using gene prediction method: Gnomon.
HORMA domain containing 1, transcript variant X4
HORMA domain containing 1, transcript variant X5
HORMA domain containing 1, transcript variant X2
HORMA domain containing 1, transcript variant X3
HORMA domain containing 1, transcript variant X1
HORMA domain containing 1, transcript variant X7
HORMA domain containing 1, transcript variant X6
HORMA domain containing 1, transcript variant X8
HORMA domain-containing protein 1 isoform X1
HORMA domain-containing protein 1 isoform X2
HORMA domain-containing protein 1 isoform X3
golgi phosphoprotein 3 like; Derived by automated computational analysis using gene prediction method: Gnomon.
golgi phosphoprotein 3 like, transcript variant X1
golgi phosphoprotein 3 like, transcript variant X3
golgi phosphoprotein 3 like, transcript variant X2
endosulfine alpha; Derived by automated computational analysis using gene prediction method: Gnomon.
endosulfine alpha, transcript variant X1
endosulfine alpha, transcript variant X2
MCL1 apoptosis regulator, BCL2 family member; Derived by automated computational analysis using gene prediction method: Gnomon.
MCL1 apoptosis regulator, BCL2 family member
induced myeloid leukemia cell differentiation protein Mcl-1
glycosylated lysosomal membrane protein; Derived by automated computational analysis using gene prediction method: Gnomon.
glycosylated lysosomal membrane protein, transcript variant X1
glycosylated lysosomal membrane protein, transcript variant X2
glycosylated lysosomal membrane protein isoform X1
glycosylated lysosomal membrane protein isoform X2
transfer RNA arginine (anticodon UCU); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
cell adhesion molecule 3; Derived by automated computational analysis using gene prediction method: Gnomon.
atypical chemokine receptor 1-like; Derived by automated computational analysis using gene prediction method: Gnomon.
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins
serum amyloid P-component-like; Derived by automated computational analysis using gene prediction method: Gnomon.
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 9 Proteins
mucosal pentraxin-like; Derived by automated computational analysis using gene prediction method: Gnomon.
dual specificity phosphatase 23; Derived by automated computational analysis using gene prediction method: Gnomon.
dual specificity phosphatase 23, transcript variant X2
dual specificity phosphatase 23, transcript variant X1
dual specificity protein phosphatase 23 isoform X1
dual specificity protein phosphatase 23 isoform X2
immunoglobulin superfamily member 9; Derived by automated computational analysis using gene prediction method: Gnomon.
transgelin 2; Derived by automated computational analysis using gene prediction method: Gnomon.
cilia- and flagella-associated protein 45-like; Derived by automated computational analysis using gene prediction method: Gnomon.
cilia- and flagella-associated protein 45-like
uncharacterized LOC120764313; Derived by automated computational analysis using gene prediction method: Gnomon.
uncharacterized LOC120764262; Derived by automated computational analysis using gene prediction method: Gnomon.
Fc receptor like 6; Derived by automated computational analysis using gene prediction method: Gnomon.
sorting nexin 27; Derived by automated computational analysis using gene prediction method: Gnomon.
CUGBP Elav-like family member 3; Derived by automated computational analysis using gene prediction method: Gnomon.
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 25 Proteins
peroxisomal biogenesis factor 11 beta; Derived by automated computational analysis using gene prediction method: Gnomon.
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 long SRA reads, 14 Proteins
limb and CNS expressed 1 like; Derived by automated computational analysis using gene prediction method: Gnomon.
RNA binding motif protein 8A; Derived by automated computational analysis using gene prediction method: Gnomon.
ankyrin repeat domain 34A; Derived by automated computational analysis using gene prediction method: Gnomon.
ankyrin repeat domain-containing protein 34A
RNA polymerase III subunit GL; Derived by automated computational analysis using gene prediction method: Gnomon.
RNA polymerase III subunit GL, transcript variant X3
RNA polymerase III subunit GL, transcript variant X2
RNA polymerase III subunit GL, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 12 Proteins
DNA-directed RNA polymerase III subunit RPC7-like isoform X1
DNA-directed RNA polymerase III subunit RPC7-like isoform X2
DNA-directed RNA polymerase III subunit RPC7-like isoform X3
thioredoxin interacting protein; Derived by automated computational analysis using gene prediction method: Gnomon.
thioredoxin interacting protein, transcript variant X3
thioredoxin interacting protein, transcript variant X2
thioredoxin interacting protein, transcript variant X1
thioredoxin-interacting protein isoform X2
thioredoxin-interacting protein isoform X1
hemojuvelin BMP co-receptor; Derived by automated computational analysis using gene prediction method: Gnomon.
bolA family member 1; Derived by automated computational analysis using gene prediction method: Gnomon.
synaptic vesicle glycoprotein 2A; Derived by automated computational analysis using gene prediction method: Gnomon.
splicing factor 3b subunit 4; Derived by automated computational analysis using gene prediction method: Gnomon.
myotubularin related protein 11; Derived by automated computational analysis using gene prediction method: Gnomon.
OTU deubiquitinase 7B; Derived by automated computational analysis using gene prediction method: Gnomon.
OTU deubiquitinase 7B, transcript variant X1
OTU deubiquitinase 7B, transcript variant X2
vacuolar protein sorting 45 homolog; Derived by automated computational analysis using gene prediction method: Gnomon.
vacuolar protein sorting-associated protein 45
pleckstrin homology domain containing O1; Derived by automated computational analysis using gene prediction method: Gnomon.
pleckstrin homology domain containing O1, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 8 ESTs, 1 long SRA read, 11 Proteins
pleckstrin homology domain containing O1, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 7 ESTs, 11 Proteins
pleckstrin homology domain-containing family O member 1
acidic nuclear phosphoprotein 32 family member E; Derived by automated computational analysis using gene prediction method: Gnomon.
acidic nuclear phosphoprotein 32 family member E, transcript variant X1
acidic nuclear phosphoprotein 32 family member E, transcript variant X2
acidic leucine-rich nuclear phosphoprotein 32 family member E isoform X2
acidic leucine-rich nuclear phosphoprotein 32 family member E isoform X1
aph-1 homolog A, gamma-secretase subunit; Derived by automated computational analysis using gene prediction method: Gnomon.
aph-1 homolog A, gamma-secretase subunit, transcript variant X3
gamma-secretase subunit APH-1A isoform X3
aph-1 homolog A, gamma-secretase subunit, transcript variant X5
gamma-secretase subunit APH-1A isoform X5
aph-1 homolog A, gamma-secretase subunit, transcript variant X4
gamma-secretase subunit APH-1A isoform X4
aph-1 homolog A, gamma-secretase subunit, transcript variant X2
gamma-secretase subunit APH-1A isoform X2
aph-1 homolog A, gamma-secretase subunit, transcript variant X1
gamma-secretase subunit APH-1A isoform X1
carbonic anhydrase 14; Derived by automated computational analysis using gene prediction method: Gnomon.
circadian associated repressor of transcription; Derived by automated computational analysis using gene prediction method: Gnomon.
circadian associated repressor of transcription
circadian-associated transcriptional repressor
mitochondrial ribosomal protein S21; Derived by automated computational analysis using gene prediction method: Gnomon.
mitochondrial ribosomal protein S21, transcript variant X3
mitochondrial ribosomal protein S21, transcript variant X2
mitochondrial ribosomal protein S21, transcript variant X1
small ribosomal subunit protein bS21m isoform X2
small ribosomal subunit protein bS21m isoform X1
pre-mRNA processing factor 3; Derived by automated computational analysis using gene prediction method: Gnomon.
U4/U6 small nuclear ribonucleoprotein Prp3
regulation of nuclear pre-mRNA domain containing 2; Derived by automated computational analysis using gene prediction method: Gnomon.
regulation of nuclear pre-mRNA domain containing 2
The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 7 Proteins
The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
LOW QUALITY PROTEIN: regulation of nuclear pre-mRNA domain-containing protein 2
threonyl-tRNA synthetase 2, mitochondrial; Derived by automated computational analysis using gene prediction method: Gnomon.
threonyl-tRNA synthetase 2, mitochondrial
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 17 Proteins
extracellular matrix protein 1; Derived by automated computational analysis using gene prediction method: Gnomon.
The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins
LOW QUALITY PROTEIN: extracellular matrix protein 1
cathepsin K; Derived by automated computational analysis using gene prediction method: Gnomon.
The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon
aryl hydrocarbon receptor nuclear translocator; Derived by automated computational analysis using gene prediction method: Gnomon.
aryl hydrocarbon receptor nuclear translocator, transcript variant X3
aryl hydrocarbon receptor nuclear translocator, transcript variant X12
aryl hydrocarbon receptor nuclear translocator, transcript variant X11
aryl hydrocarbon receptor nuclear translocator, transcript variant X4
aryl hydrocarbon receptor nuclear translocator, transcript variant X10
aryl hydrocarbon receptor nuclear translocator, transcript variant X9
aryl hydrocarbon receptor nuclear translocator, transcript variant X6
aryl hydrocarbon receptor nuclear translocator, transcript variant X8
aryl hydrocarbon receptor nuclear translocator, transcript variant X7
aryl hydrocarbon receptor nuclear translocator, transcript variant X5
aryl hydrocarbon receptor nuclear translocator, transcript variant X2
aryl hydrocarbon receptor nuclear translocator, transcript variant X1
aryl hydrocarbon receptor nuclear translocator isoform X12
aryl hydrocarbon receptor nuclear translocator isoform X11
aryl hydrocarbon receptor nuclear translocator isoform X4
aryl hydrocarbon receptor nuclear translocator isoform X10
aryl hydrocarbon receptor nuclear translocator isoform X9
aryl hydrocarbon receptor nuclear translocator isoform X6
aryl hydrocarbon receptor nuclear translocator isoform X8
aryl hydrocarbon receptor nuclear translocator isoform X7
aryl hydrocarbon receptor nuclear translocator isoform X5
aryl hydrocarbon receptor nuclear translocator isoform X2
aryl hydrocarbon receptor nuclear translocator isoform X1
aryl hydrocarbon receptor nuclear translocator isoform X3
cortexin domain containing 2; Derived by automated computational analysis using gene prediction method: Gnomon.
SET domain bifurcated histone lysine methyltransferase 1; Derived by automated computational analysis using gene prediction method: Gnomon.
SET domain bifurcated histone lysine methyltransferase 1, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 ESTs, 6 Proteins
SET domain bifurcated histone lysine methyltransferase 1, transcript variant X2
histone-lysine N-methyltransferase SETDB1 isoform X1
histone-lysine N-methyltransferase SETDB1 isoform X2
ceramide synthase 2; Derived by automated computational analysis using gene prediction method: Gnomon.
MINDY lysine 48 deubiquitinase 1; Derived by automated computational analysis using gene prediction method: Gnomon.
MINDY lysine 48 deubiquitinase 1, transcript variant X2
MINDY lysine 48 deubiquitinase 1, transcript variant X1
ubiquitin carboxyl-terminal hydrolase MINDY-1 isoform X2
ubiquitin carboxyl-terminal hydrolase MINDY-1 isoform X1
prune exopolyphosphatase 1; Derived by automated computational analysis using gene prediction method: Gnomon.
CDC42 small effector 1; Derived by automated computational analysis using gene prediction method: Gnomon.
CDC42 small effector 1, transcript variant X2
CDC42 small effector 1, transcript variant X1
MLLT11 transcription factor 7 cofactor; Derived by automated computational analysis using gene prediction method: Gnomon.
MLLT11 transcription factor 7 cofactor, transcript variant X2
MLLT11 transcription factor 7 cofactor, transcript variant X1
semaphorin 6C; Derived by automated computational analysis using gene prediction method: Gnomon.
The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein
nudix hydrolase 17; Derived by automated computational analysis using gene prediction method: Gnomon.
nucleoside diphosphate-linked moiety X motif 17
ankyrin repeat domain 35; Derived by automated computational analysis using gene prediction method: Gnomon.
ankyrin repeat domain-containing protein 35
Rho/Rac guanine nucleotide exchange factor 2; Derived by automated computational analysis using gene prediction method: Gnomon.
Rho/Rac guanine nucleotide exchange factor 2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 ESTs, 19 Proteins
rho guanine nucleotide exchange factor 2
cathepsin S; Derived by automated computational analysis using gene prediction method: Gnomon.
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 32 Proteins
ribosomal protein S27; Derived by automated computational analysis using gene prediction method: Gnomon.
RAB13, member RAS oncogene family; Derived by automated computational analysis using gene prediction method: Gnomon.
RAB13, member RAS oncogene family, transcript variant X1
RAB13, member RAS oncogene family, transcript variant X3
RAB13, member RAS oncogene family, transcript variant X2
jumping translocation breakpoint; Derived by automated computational analysis using gene prediction method: Gnomon.
cAMP responsive element binding protein 3 like 4; Derived by automated computational analysis using gene prediction method: Gnomon.
cAMP responsive element binding protein 3 like 4
cyclic AMP-responsive element-binding protein 3-like protein 4
solute carrier family 39 member 1; Derived by automated computational analysis using gene prediction method: Gnomon.
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 18 Proteins
CREB regulated transcription coactivator 2; Derived by automated computational analysis using gene prediction method: Gnomon.
CREB regulated transcription coactivator 2
CREB-regulated transcription coactivator 2
DENN domain containing 4B; Derived by automated computational analysis using gene prediction method: Gnomon.
solute carrier family 27 member 3; Derived by automated computational analysis using gene prediction method: Gnomon.
long-chain fatty acid transport protein 3
integrator complex subunit 3; Derived by automated computational analysis using gene prediction method: Gnomon.
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 mRNAs, 4 ESTs, 6 Proteins
natriuretic peptide receptor 1; Derived by automated computational analysis using gene prediction method: Gnomon.
transfer RNA methionine (anticodon CAU); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
interleukin enhancer binding factor 2; Derived by automated computational analysis using gene prediction method: Gnomon.
interleukin enhancer binding factor 2, transcript variant X1
interleukin enhancer binding factor 2, transcript variant X2
interleukin enhancer-binding factor 2 isoform X1
interleukin enhancer-binding factor 2 isoform X2
SNAP associated protein; Derived by automated computational analysis using gene prediction method: Gnomon.
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 2 Proteins
mothers against decapentaplegic homolog 4-like; Derived by automated computational analysis using gene prediction method: Gnomon.
mothers against decapentaplegic homolog 4-like, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 28 Proteins
mothers against decapentaplegic homolog 4-like, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 29 Proteins
mothers against decapentaplegic homolog 4-like, transcript variant X3
mothers against decapentaplegic homolog 4-like isoform X2
mothers against decapentaplegic homolog 4-like isoform X1
chromatin target of PRMT1; Derived by automated computational analysis using gene prediction method: Gnomon.
chromatin target of PRMT1, transcript variant X2
chromatin target of PRMT1, transcript variant X1
chromatin target of PRMT1 protein isoform X2
chromatin target of PRMT1 protein isoform X1
S100 calcium binding protein A1; Derived by automated computational analysis using gene prediction method: Gnomon.
S100 calcium binding protein A13; Derived by automated computational analysis using gene prediction method: Gnomon.
S100 calcium binding protein A13, transcript variant X1
S100 calcium binding protein A13, transcript variant X2
S100 calcium binding protein A13, transcript variant X3
S100 calcium binding protein A14; Derived by automated computational analysis using gene prediction method: Gnomon.
S100 calcium binding protein A16; Derived by automated computational analysis using gene prediction method: Gnomon.
S100 calcium binding protein A16, transcript variant X1
S100 calcium binding protein A16, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins
protein S100-A4-like; Derived by automated computational analysis using gene prediction method: Gnomon.
protein S100-A9-like; Derived by automated computational analysis using gene prediction method: Gnomon.
protein S100-A15A-like; Derived by automated computational analysis using gene prediction method: Gnomon.
protein MRP-126-like; Derived by automated computational analysis using gene prediction method: Gnomon.
keratin-associated protein 5-4-like; Derived by automated computational analysis using gene prediction method: Gnomon.
loricrin-like; Derived by automated computational analysis using gene prediction method: Gnomon.
keratin-associated protein 5-8-like; Derived by automated computational analysis using gene prediction method: Gnomon.
keratin-associated protein 5-8-like, transcript variant X2
keratin-associated protein 5-8-like, transcript variant X1
keratin-associated protein 5-8-like isoform X2
keratin-associated protein 5-8-like isoform X1
keratin-associated protein 5-2-like; Derived by automated computational analysis using gene prediction method: Gnomon.
keratin-associated protein 5-5-like; Derived by automated computational analysis using gene prediction method: Gnomon.
putative small proline-rich protein 5; Derived by automated computational analysis using gene prediction method: Gnomon.
keratin-associated protein 19-2-like; Derived by automated computational analysis using gene prediction method: Gnomon.
The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins
LOW QUALITY PROTEIN: keratin-associated protein 19-2-like
claw keratin-like; Derived by automated computational analysis using gene prediction method: Gnomon.
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 38 Proteins
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 39 Proteins
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 37 Proteins
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 36 Proteins
feather beta keratin-like; Derived by automated computational analysis using gene prediction method: Gnomon.
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 131 Proteins
feather keratin 1; Derived by automated computational analysis using gene prediction method: Gnomon.
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 129 Proteins
feather keratin 1-like; Derived by automated computational analysis using gene prediction method: Gnomon.
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 125 Proteins
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 126 Proteins
feather keratin 4-like; Derived by automated computational analysis using gene prediction method: Gnomon.
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 69 Proteins
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 59 Proteins
scale keratin-like; Derived by automated computational analysis using gene prediction method: Gnomon.
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 19 Proteins
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 20 Proteins
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 55 Proteins
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 51 Proteins
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 52 Proteins
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 30 Proteins
beta-keratin-related protein-like; Derived by automated computational analysis using gene prediction method: Gnomon.
feather keratin B-4-like; Derived by automated computational analysis using gene prediction method: Gnomon.
involucrin-like; Derived by automated computational analysis using gene prediction method: Gnomon.
proline-rich protein 9-like; Derived by automated computational analysis using gene prediction method: Gnomon.
zonadhesin-like; Derived by automated computational analysis using gene prediction method: Gnomon.
trichohyalin-like; Derived by automated computational analysis using gene prediction method: Gnomon.
protein S100-A11; Derived by automated computational analysis using gene prediction method: Gnomon.
coatomer subunit alpha-like; Derived by automated computational analysis using gene prediction method: Gnomon.
helix-loop-helix protein 1-like; Derived by automated computational analysis using gene prediction method: Gnomon.
VANGL planar cell polarity protein 2; Derived by automated computational analysis using gene prediction method: Gnomon.
VANGL planar cell polarity protein 2, transcript variant X1
VANGL planar cell polarity protein 2, transcript variant X2
collagen alpha-2(I) chain-like; Derived by automated computational analysis using gene prediction method: Gnomon.
SLAM family member 7-like; Derived by automated computational analysis using gene prediction method: Gnomon.
SLAM family member 7-like, transcript variant X2
SLAM family member 7-like, transcript variant X1