Cereibacter azotoformans strain SY5 plasmid p4, complete sequence.
type: Entry
definition: Cereibacter azotoformans strain SY5 plasmid p4, complete sequence.
sequence version: NZ_CP090026.1
sequence date: 2022-12-08
sequence: sequence
division: CON
label: NZ_CP090026.1
type: RefSeq
SIO_000068: refseq
dblink: PRJNA224116
dblink: SAMN24182653
keyword: RefSeq
source: Cereibacter azotoformans
organism: Cereibacter azotoformans
taxonomy: Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodobacterales; Paracoccaceae; Cereibacter.
reference: 1
reference: 2
comment: REFSEQ INFORMATION: The reference sequence is identical to\nCP090026.1.\nThe annotation was added by the NCBI Prokaryotic Genome Annotation\nPipeline (PGAP). Information about PGAP can be found here:\nhttps://www.ncbi.nlm.nih.gov/genome/annotation_prok/\n\n##Genome-Assembly-Data-START##\nAssembly Method :: canu v. 1.3\nGenome Representation :: Full\nExpected Final Version :: Yes\nGenome Coverage :: 165.02x\nSequencing Technology :: Illumina HiSeq; PacBio RSII\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI RefSeq\nAnnotation Date :: 12/08/2022 17:54:21\nAnnotation Pipeline :: NCBI Prokaryotic Genome\n Annotation Pipeline (PGAP)\nAnnotation Method :: Best-placed reference protein\n set; GeneMarkS-2+\nAnnotation Software revision :: 6.3\nFeatures Annotated :: Gene; CDS; rRNA; tRNA; ncRNA\nGenes (total) :: 4,393\nCDSs (total) :: 4,323\nGenes (coding) :: 4,157\nCDSs (with protein) :: 4,157\nGenes (RNA) :: 70\nrRNAs :: 4, 4, 4 (5S, 16S, 23S)\ncomplete rRNAs :: 4, 4, 4 (5S, 16S, 23S)\ntRNAs :: 55\nncRNAs :: 3\nPseudo Genes (total) :: 166\nCDSs (without protein) :: 166\nPseudo Genes (ambiguous residues) :: 0 of 166\nPseudo Genes (frameshifted) :: 80 of 166\nPseudo Genes (incomplete) :: 131 of 166\nPseudo Genes (internal stop) :: 25 of 166\nPseudo Genes (multiple problems) :: 61 of 166\nCRISPR Arrays :: 1\n##Genome-Annotation-Data-END##\nCOMPLETENESS: full length.

sequence
subclass of: SO_0000155
sequence length: 43861
topology: circular
so has quality: SO_0000988
location: 1..43861
location: region:1-43861:1
RO_0002162: 43057

NZ_CP090026
type: RefSeq
SIO_000068: refseq

PRJNA224116
type: BioProject
SIO_000068: bioproject

SAMN24182653
type: BioSample
SIO_000068: biosample

1
title: Isolation, Identification and Complete Genome Analysis of Rhodobacter sphaeroides SY5 with Enhancing Effect on Disease Resistance of Eriocheir sinensis
author: Zhang, S.
journal: Unpublished

2
title: Direct Submission
author: Zhang, S.
journal: Submitted (18-DEC-2021) National Pathogen Collection Center for Aquatic Animals, Shanghai Ocean University, No.999,Hucheng ring road, Shanghai 201306, China

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:43861:1
position: 43861
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-43861:1:source
so part of: sequence
organism: Cereibacter azotoformans
mol type: genomic DNA
strain: SY5
isolation source: Aquaculture sediment
plasmid: p4
collection date: 2021-04

43057
type: Taxonomy
SIO_000068: taxonomy

LV780_RS21710
type: Gene
subclass of: SO_0000704
RO_0002162: 43057
locus tag: LV780_RS21710
old locus tag: LV780_21710
so part of: sequence
location: complement(join(43658..43861,1..825))
location: region:1-43861:-1
so has part: feature:1-825:-1:exon
so has part: feature:43658-43861:-1:exon
subclass of: SO_0000010

position:1:-1
position: 1
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:43861:-1
position: 43861
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1-825:-1:exon

position:825:-1
position: 825
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:43658-43861:-1:exon

position:43658:-1
position: 43658
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LV780_RS21710
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 43057
locus tag: LV780_RS21710
old locus tag: LV780_21710
inference: COORDINATES: similar to AA sequence:RefSeq:WP_007331490.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: replication initiator protein A
translation: MSTPLLPDRHPQGDFFVCDIFDAAPKGDIGSMEHPIFSLSTKPDTRSRRYEHRGLTVEIKPSSDGLATVHDRDVLIFCISQLIHGMNNGKEPSQTVRFQASDLLKATNRMTTGRGYELLKAAMERLAGTRISTNITTGGQEIFETFGLIERARIVRETREGRMQEVEVKLSDWVFNAIRAQEVLTLSRDYFRLRRPLERRLYELARKHCGRQTEWRIGLELLQKKCGSGSPLFEFKRLVGKIVTEDERHSHFPDYSIRFTEDENGIVFQSRGSVPVPSSEVFEGHLDSSVYEDARAAAPGWDVRYLEQEWRRWCAAEEIEPKVPERHFVKFCATWFEKRGRP
SIO_010081: LV780_RS21710
subclass of: SO_0000673
so part of: LV780_RS21710
location: complement(join(43658..43861,1..825))
location: region:1-43861:-1
so has part: feature:1-825:-1:exon
so has part: feature:43658-43861:-1:exon

WP_108222754.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1-825:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:43658-43861:-1:exon

LV780_RS21715
type: Gene
subclass of: SO_0000704
RO_0002162: 43057
locus tag: LV780_RS21715
old locus tag: LV780_21715
so part of: sequence
location: 1506..1748
location: region:1506-1748:1
so has part: feature:1506-1748:1:exon
subclass of: SO_0000010

position:1506:1
position: 1506
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1748:1
position: 1748
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1506-1748:1:exon

LV780_RS21715
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 43057
locus tag: LV780_RS21715
old locus tag: LV780_21715
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011910984.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: type II toxin-antitoxin system Phd/YefM family antitoxin
translation: MWTLQDAKNRFSSVVEAALAGVPQEVSRRGRPAVVVLSVEEYHRLLSGAQGNRGSFADHLMAFPGDGLERAEVVPRDVGF
SIO_010081: LV780_RS21715
subclass of: SO_0000673
so part of: LV780_RS21715
location: 1506..1748
location: region:1506-1748:1
so has part: feature:1506-1748:1:exon

WP_108222755.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1506-1748:1:exon

LV780_RS21720
type: Gene
subclass of: SO_0000704
RO_0002162: 43057
locus tag: LV780_RS21720
old locus tag: LV780_21720
so part of: sequence
location: 1748..2149
location: region:1748-2149:1
so has part: feature:1748-2149:1:exon
subclass of: SO_0000010

position:2149:1
position: 2149
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1748-2149:1:exon

LV780_RS21720
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 43057
locus tag: LV780_RS21720
old locus tag: LV780_21720
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013069292.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: type II toxin-antitoxin system VapC family toxin
translation: MYLLDTNVISAVRRPDRAPQVAAWLAGRNEADLFLSVITLGEIERGITRQEQGNPAFAADLQAWLDRTMRLFSDRILPFEAEDARIWGRLSSRIGHNGADLMIAATALARGAVVVTGNVDDFRPTGVRIEDPF
SIO_010081: LV780_RS21720
subclass of: SO_0000673
so part of: LV780_RS21720
location: 1748..2149
location: region:1748-2149:1
so has part: feature:1748-2149:1:exon

WP_117345303.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1748-2149:1:exon

LV780_RS21725
type: Gene
subclass of: SO_0000704
RO_0002162: 43057
locus tag: LV780_RS21725
old locus tag: LV780_21725
so part of: sequence
location: 2287..2982
location: region:2287-2982:1
so has part: feature:2287-2982:1:exon
subclass of: SO_0000010

position:2287:1
position: 2287
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2982:1
position: 2982
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2287-2982:1:exon

LV780_RS21725
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 43057
locus tag: LV780_RS21725
old locus tag: LV780_21725
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012631434.1
GO function: GO:0003677 - DNA binding [Evidence IEA]; GO:0000150 - DNA strand exchange activity [Evidence IEA]
GO process: GO:0006310 - DNA recombination [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: recombinase family protein
translation: MKFVTYLRVSTERQGQSGLGLEAQRAAVAAHVAARGEVVAEFIEIESGKRSDRPELAKALAVAKRAGAILLIAKLDRLARNVAFIANLLESGVEVTAADMPEANRFVLHIMAAVAEQEGRAISERTRAALAAARARGVKLGWSMPERKDEQRRASASGALQNVLKADQHAASVLHLVRQHVEQGASLRQVASQLNAQGVRTARGGAWHAGTVRNILARSLEGRIERTGCAL
SIO_010081: LV780_RS21725
subclass of: SO_0000673
so part of: LV780_RS21725
location: 2287..2982
location: region:2287-2982:1
so has part: feature:2287-2982:1:exon

WP_108222601.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2287-2982:1:exon

LV780_RS21730
type: Gene
subclass of: SO_0000704
RO_0002162: 43057
locus tag: LV780_RS21730
old locus tag: LV780_21730
so part of: sequence
location: 3109..3489
location: region:3109-3489:1
so has part: feature:3109-3489:1:exon
subclass of: SO_0000010

position:3109:1
position: 3109
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3489:1
position: 3489
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3109-3489:1:exon

LV780_RS21730
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 43057
locus tag: LV780_RS21730
old locus tag: LV780_21730
inference: COORDINATES: similar to AA sequence:RefSeq:WP_008032772.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: XRE family transcriptional regulator
translation: MHDTAKLAPARDRGAVLTKATLNAADRLGLSQRELAEIIGLSEATVSRMKRGAATLEDGSAHFQLAALLVRIFRSLDAIVGGDEGVARAWMKAPNTALGVPPVERISKISGLVDVATYLDARRAPL
SIO_010081: LV780_RS21730
subclass of: SO_0000673
so part of: LV780_RS21730
location: 3109..3489
location: region:3109-3489:1
so has part: feature:3109-3489:1:exon

WP_108222600.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3109-3489:1:exon

LV780_RS21735
type: Gene
subclass of: SO_0000704
RO_0002162: 43057
locus tag: LV780_RS21735
old locus tag: LV780_21735
so part of: sequence
location: 3449..4225
location: region:3449-4225:1
so has part: feature:3449-4225:1:exon
subclass of: SO_0000010

position:3449:1
position: 3449
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4225:1
position: 4225
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3449-4225:1:exon

LV780_RS21735
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 43057
locus tag: LV780_RS21735
old locus tag: LV780_21735
inference: COORDINATES: similar to AA sequence:RefSeq:WP_009565037.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: RES family NAD+ phosphorylase
translation: MSLPTWTPDALRSEARGLSGLAWRLVEAQHQVSTMKLVDGAEQDILEAILDETKPPVPEECRHLGYLLSTPFRYRPYPHGSRFRRAGLTPGVWYGAEAPETAVAEMVFYRFLFYAESPATPFPDNAAEYTAFSVKVATPLSLDLTSGKLAHDAMRWTHLTDYAPCQELADTARDTGVEVIRYRSVRDPAEGANLAVLTCHAFAARDHSERQTWHIRIGSGGAQVRREFPRHRMEFPTNSFDADARLHGMNWDRPSVQR
SIO_010081: LV780_RS21735
subclass of: SO_0000673
so part of: LV780_RS21735
location: 3449..4225
location: region:3449-4225:1
so has part: feature:3449-4225:1:exon

WP_108222599.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3449-4225:1:exon

repeat_region
type: Repeat Region
subclass of: SO_0000657
RO_0002162: 43057
inference: COORDINATES: alignment:crt:1.2
inference: COORDINATES: alignment:pilercr:v1.02
rpt family: CRISPR
rpt type: direct
rpt unit range: 4535..4570
rpt unit seq: gcttcaatgaggccgaggcgtgcccgcctcggaagg
so part of: sequence
location: 4388..6403
location: region:4388-6403:1
so has part: feature:4388-6403:1:region

position:4388:1
position: 4388
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6403:1
position: 6403
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4388-6403:1:region

LV780_RS21740
type: Gene
subclass of: SO_0000704
RO_0002162: 43057
gene: cas2
locus tag: LV780_RS21740
old locus tag: LV780_21740
so part of: sequence
location: complement(6611..6904)
location: region:6611-6904:-1
so has part: feature:6611-6904:-1:exon
subclass of: SO_0000010

position:6611:-1
position: 6611
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6904:-1
position: 6904
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6611-6904:-1:exon

LV780_RS21740
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 43057
gene: cas2
locus tag: LV780_RS21740
old locus tag: LV780_21740
inference: COORDINATES: similar to AA sequence:RefSeq:WP_018952599.1
GO function: GO:0004521 - endoribonuclease activity [Evidence IEA]
GO process: GO:0043571 - maintenance of CRISPR repeat elements [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: CRISPR-associated endonuclease Cas2
translation: MPSERLYIVTYDIADRKRWRKVFATMEGFGRWLQLSVFQCRLSARRRGELSARLSDIIRKDEDHVLIIDVGPAGNIEPHVESLGRSYSALERKAIVI
SIO_010081: LV780_RS21740
subclass of: SO_0000673
so part of: LV780_RS21740
location: complement(6611..6904)
location: region:6611-6904:-1
so has part: feature:6611-6904:-1:exon

WP_108222598.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:6611-6904:-1:exon

LV780_RS21745
type: Gene
subclass of: SO_0000704
RO_0002162: 43057
locus tag: LV780_RS21745
old locus tag: LV780_21745
so part of: sequence
location: complement(6908..8629)
location: region:6908-8629:-1
so has part: feature:6908-8629:-1:exon
subclass of: SO_0000010

position:6908:-1
position: 6908
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8629:-1
position: 8629
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6908-8629:-1:exon

LV780_RS21745
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 43057
locus tag: LV780_RS21745
old locus tag: LV780_21745
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012638986.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: CRISPR-associated endonuclease Cas4/Cas1
translation: MSDVLQGELLLPSPLGEEDVPLVPVRMINEWVYCPRLAYLMWIEAEWADTADTEDGRRVHRRADRPSGSLPQPGDAVVEEEPAPFRCRSVTLSSTRLGMVGKMDVVEGEGRHAVPVELKRGARPHVAQGAHDPERVQLCAQALLLEEAGFEVAEGFIWFAASRERVPVLFDSELREKTLRAAADLRLTAATGRRPPPLENSPKCPRCAVAGICLPDEVNFFRDGALPRPLNPADDPALPLHVQAQGACLRKKGETLVVEADEEKTDVPLIDVSSVSLYGRVSLTTPALHELMRREIPVAWHSTGGWLMGHTVGTGTRNVTIRAAQFRVADDPPRSLCIAAGLVAAKIRNQRTILRRNWKGGAEDPALADVMDRLKQLAAKAPHAGASANLLGIEGEAAALYFRHFPKLIVPSKSETVTFDFEGRNRRPPADPVNALLSFSYALAVRLFVSALVSAGFDPYQGFYHRPRHGRPALALDMMEPFRPLLCDSTVLMVINNGEVGPSDFVTLGRSCSLTPSGRRSLVAAWERRLDQETTHPIFGYRLTTRRLIDVQCRLLARHIAGEIPEMPHYVPR
SIO_010081: LV780_RS21745
subclass of: SO_0000673
so part of: LV780_RS21745
location: complement(6908..8629)
location: region:6908-8629:-1
so has part: feature:6908-8629:-1:exon

WP_108222597.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:6908-8629:-1:exon

LV780_RS21750
type: Gene
subclass of: SO_0000704
RO_0002162: 43057
gene: csb2
locus tag: LV780_RS21750
old locus tag: LV780_21750
so part of: sequence
location: complement(8636..10723)
location: region:8636-10723:-1
so has part: feature:8636-10723:-1:exon
subclass of: SO_0000010

position:8636:-1
position: 8636
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:10723:-1
position: 10723
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8636-10723:-1:exon

LV780_RS21750
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 43057
gene: csb2
locus tag: LV780_RS21750
old locus tag: LV780_21750
inference: COORDINATES: protein motif:HMM:TIGR02165.1
GO function: GO:0003674 - molecular_function [Evidence IEA]
GO process: GO:0043571 - maintenance of CRISPR repeat elements [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: type I-U CRISPR-associated protein Csb2
translation: MVALALEVRFLDQRYHGTPDWPPSPGRLFQALVAGAASDGTGCEARRAALHWFETLEAPVILAPRTEPGRAYISYVPNNDGDAEGDPTDPSRIGKRIQARLIAEDAPLIYLWSGLEAVPDGVADLAERLCQLGRGIDPAYARAVELEEEAVAALMADHPGSVHRPAGSGPDGLDCPLPGSLASLEARHEAFLKRLAVQGAGRKSRIEFSNPPRARFGRVRYDRAAERILFDLRDEKGHFWAIDAAHAGQLVSDWLKDAAERLGPTLAPLAERFVIGRGAGPRDLDRRIRAFALPTLRQHGDRNIRRLAVEIPPDCPIRRDDLVWALGGSADFVGKWGQPVQTEDHRMLERYCQASSRWQSEIPLALPVQRRRLSRGETKAGSERAREEAAARAAVATALRHAGVHAKVAAIGVRKEPYADQGVMAERFAQGTRFDKHSLWHAEVEFLEPVEGPLLLGNGRFAGLGLMRPAQDGAKNDILAFRILEGLEAPDAENLAQALRRAVMARCGANAPAFITGHENDGSPSRPGRNGHVAFVADLPRRRLLVIPPHLADHRAQGTGEDAAMRDLADALQGFTTLRAGRSGCLQLAADPVQDDDPLFCRARVWASVTRYQATHHPRGRPLDVVLKDDLSRELSRRGLPAAEVSVLKSGFNPGGGLFAHLRLTFSHPVQGPVLLGRTLHKGGGLFAAVMAPDR
SIO_010081: LV780_RS21750
subclass of: SO_0000673
so part of: LV780_RS21750
location: complement(8636..10723)
location: region:8636-10723:-1
so has part: feature:8636-10723:-1:exon

WP_181318582.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:8636-10723:-1:exon

LV780_RS21755
type: Gene
subclass of: SO_0000704
RO_0002162: 43057
gene: cas7u
locus tag: LV780_RS21755
old locus tag: LV780_21755
so part of: sequence
location: complement(10728..11762)
location: region:10728-11762:-1
so has part: feature:10728-11762:-1:exon
subclass of: SO_0000010

position:10728:-1
position: 10728
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:11762:-1
position: 11762
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:10728-11762:-1:exon

LV780_RS21755
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 43057
gene: cas7u
locus tag: LV780_RS21755
old locus tag: LV780_21755
inference: COORDINATES: similar to AA sequence:RefSeq:WP_003608660.1
GO function: GO:0003674 - molecular_function [Evidence IEA]
GO process: GO:0043571 - maintenance of CRISPR repeat elements [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: type I-U CRISPR-associated RAMP protein Csb1/Cas7u
translation: MTTTPSHEDIAHWIAKDGPVALHIREMLEPVEGPGMPIFPATYANIGYNIDTLSDGTKIASIDSVGSQANRIEPLFKDAPLASLVPQIDITYGNDKTLSILEAGHRLGDAVIRCTELASEAHQAFIALLDRGDATLIARLAPTSLVFGAWDSRDTQAKLPRIVQSVIRAWDVEPLTRSAQYTPALDYSALEVFSEAEREKQEGKAGSQLAERGYVHVPSTGQHGGVIARGVIRRDVTVNLVALRRLQGEESELLQRYVLGLALVAATAPQDGFLRAGCQLVPAGPLTVQRVARDGTRTDIALDHATALSYAQKAASAFGVGASRTVAFDKTRAKDDARPAQKKA
SIO_010081: LV780_RS21755
subclass of: SO_0000673
so part of: LV780_RS21755
location: complement(10728..11762)
location: region:10728-11762:-1
so has part: feature:10728-11762:-1:exon

WP_108222595.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:10728-11762:-1:exon

LV780_RS21760
type: Gene
subclass of: SO_0000704
RO_0002162: 43057
gene: cas8c
locus tag: LV780_RS21760
old locus tag: LV780_21760
so part of: sequence
location: complement(11759..12625)
location: region:11759-12625:-1
so has part: feature:11759-12625:-1:exon
subclass of: SO_0000010

position:11759:-1
position: 11759
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:12625:-1
position: 12625
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11759-12625:-1:exon

LV780_RS21760
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 43057
gene: cas8c
locus tag: LV780_RS21760
old locus tag: LV780_21760
inference: COORDINATES: similar to AA sequence:RefSeq:WP_003608662.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: type I-U CRISPR-associated protein Cas8c
translation: MAESVIPVDPANPGQVFACLGFMEVAEILCGPVEGGFSRTLGQERFLLGSTRSEDPVLDVLTFLTKAEVRVATPDRQNASFGKALFKAHAEAYPPGVYPYNQPSKQDRYPAVLVSGQTMVVIDHWADAARSDAMKFWAGASGYPGVALTRDALALLPSDPARMRLSPFAFSAPQSSSFRFDWRRDYVPIDAGFSPNRHDGITMVGYPVVELLAAIGLRYARPAREHRLSYRYTVWEERLPLSLARAALGASQPLWPGMGHRRFRMTLSWPGQEGQAKCITRVDEETPA
SIO_010081: LV780_RS21760
subclass of: SO_0000673
so part of: LV780_RS21760
location: complement(11759..12625)
location: region:11759-12625:-1
so has part: feature:11759-12625:-1:exon

WP_108222594.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:11759-12625:-1:exon

LV780_RS21765
type: Gene
subclass of: SO_0000704
RO_0002162: 43057
gene: cas3u
locus tag: LV780_RS21765
old locus tag: LV780_21765
so part of: sequence
location: complement(12618..15188)
location: region:12618-15188:-1
so has part: feature:12618-15188:-1:exon
subclass of: SO_0000010

position:12618:-1
position: 12618
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:15188:-1
position: 15188
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:12618-15188:-1:exon

LV780_RS21765
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 43057
gene: cas3u
locus tag: LV780_RS21765
old locus tag: LV780_21765
inference: COORDINATES: protein motif:HMM:TIGR02621.1
GO function: GO:0004386 - helicase activity [Evidence IEA]
GO process: GO:0043571 - maintenance of CRISPR repeat elements [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: type I-U CRISPR-associated helicase/endonuclease Cas3
translation: MCDFARRFAALTTREGRPAFSPFPWQERLHARLAAGEIPTTVDLPTGLGKTSVIACWLLAHASHPTFLNPALPRRLVYVVDRRAVVDQASEEVARFTGTWKAAAGPAAPDITIATLRGQHIDSGEWARHPAKLSVIVGTVDMIGSRLLFSGYGVSPRMRPVHAGLLGLDTLLVLDEAHLAPVFADVVRTVAADPGLRGELAPPVAPFRMMALSATQRPHDAATAPFRLDEADHAHPVIAQRLAAEKTLERREGASPEDLGAAAEDLVSLGHRIVIFVDSRQTAEKVARLLAKRHGDDAVLLFTGARRGWERTRAEQQLREAGFLADSEPPAAPRFLVATAAGEVGVDLDADHAVMDLVSWERMVQRLGRVNRRGNGKARVIVCDAGQEEIRGASLSDCRALLDRLGDAGPAALAALAAEEPDLAERASSGRPLRPALVRAELDAWSLTGLREHPGRAPVAPFLRGWVEDEVQLRLVWRHHLPVRADNSQSLSECTAFFETAPVHLSEVLEAEIGQVSDWLKKRIRMRHDALEQDPPATAVGLVLDQDSQVVRVVTLPELRTILNGPKLQFDRFLGSLVGGTLVLDARFGGLSPWGLLDAGEDVPAVTADGGNAPTDWAAVIGFSVDRETDPAETEHGSRRPERMRFPLGAEEDNAPALVVRGPAREADETRADARSRGRPVLLHNHLEHVRTEVAALSQALGLPERAGAILDHAARLHDVGKAALLWQQAMHAPAGGPWAKTRSGDGRALAGYRHEFGSLLAAEEDPELAPLAAEDRDLVLHLIATHHGWARPFIPAHGGDRGPPSLNETVAHAAALRFARLQRRWGPWGLAWWEAVFRAADWAASVREEEDRADG
SIO_010081: LV780_RS21765
subclass of: SO_0000673
so part of: LV780_RS21765
location: complement(12618..15188)
location: region:12618-15188:-1
so has part: feature:12618-15188:-1:exon

WP_233864439.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:12618-15188:-1:exon

LV780_RS21770
type: Gene
subclass of: SO_0000704
RO_0002162: 43057
locus tag: LV780_RS21770
old locus tag: LV780_21770
so part of: sequence
location: 15312..16199
location: region:15312-16199:1
so has part: feature:15312-16199:1:exon
subclass of: SO_0000010

position:15312:1
position: 15312
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:16199:1
position: 16199
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:15312-16199:1:exon

LV780_RS21770
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 43057
locus tag: LV780_RS21770
old locus tag: LV780_21770
inference: COORDINATES: similar to AA sequence:RefSeq:WP_020200512.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: WYL domain-containing protein
translation: MLSDVSQPQRERLFHIDFRANFRGQVSRQDLIARFGIREAAATRDLALYRALAPGNLEFDGSAKIYRRAEEFTPLFEHDPFRSLVAIAEGLGDAEVGDLSPHVRTEHPLRLNVPAVEIIATLTRAIVGGAAVRVVYHSLTSGRTVREIVPHALVDTAARWHVRAYDRRRLRFSDFVLTRIEDAESVSGATSPRERREADDQWMRMVELDLVPHPALARSEPVERDFGMTNGRLHVRLRAALCGYALVHWSVDASADHHMDPARHHLWLRNREALYGVENLGIAPGFDPGDATRSA
SIO_010081: LV780_RS21770
subclass of: SO_0000673
so part of: LV780_RS21770
location: 15312..16199
location: region:15312-16199:1
so has part: feature:15312-16199:1:exon

WP_108222603.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:15312-16199:1:exon

LV780_RS21775
type: Gene
subclass of: SO_0000704
RO_0002162: 43057
locus tag: LV780_RS21775
old locus tag: LV780_21775
so part of: sequence
location: 16327..16725
location: region:16327-16725:1
so has part: feature:16327-16725:1:exon
subclass of: SO_0000010

position:16327:1
position: 16327
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:16725:1
position: 16725
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:16327-16725:1:exon

LV780_RS21775
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 43057
locus tag: LV780_RS21775
old locus tag: LV780_21775
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010138052.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: helix-turn-helix transcriptional regulator
translation: MPKKPHSGTRLARFLEKRILEMRPKTQAEIASETGFVNPNMLSMIKSGTSKLALDRVPALAKALEADPGYLMRLALEQAEGDTAASALVEIFGTPVSANERAWLEEIRAASDHSDPRLTSRSRAALRAIFGK
SIO_010081: LV780_RS21775
subclass of: SO_0000673
so part of: LV780_RS21775
location: 16327..16725
location: region:16327-16725:1
so has part: feature:16327-16725:1:exon

WP_108222592.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:16327-16725:1:exon

LV780_RS21780
type: Gene
subclass of: SO_0000704
RO_0002162: 43057
locus tag: LV780_RS21780
old locus tag: LV780_21780
so part of: sequence
location: complement(16932..19817)
location: region:16932-19817:-1
so has part: feature:16932-19817:-1:exon
subclass of: SO_0000010

position:16932:-1
position: 16932
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:19817:-1
position: 19817
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:16932-19817:-1:exon

LV780_RS21780
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 43057
locus tag: LV780_RS21780
old locus tag: LV780_21780
inference: COORDINATES: similar to AA sequence:RefSeq:WP_076612398.1
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: Tn3 family transposase
translation: MARRSVLTDRQRSAVWALPTDAPTFLRHYTLADDDLDHIRSRRRSHNRFGFALQLCALRYPGRLLAPGEIIPEAISRFIGAQLGLSPDALIGYAIRAETRREHLGELRAIYGYRMFSGRGARDLKIWLDGQAELARTNEDLVRRFVEECRRTQTILPGLTVIERLCADALVAAEHRIDARIAARLDARMRERLASLLEEAVERVSRFVWLRQFEVGKNSADMNRLLDRLEFLQGLGLSADVLKEVPPHRIARLRRLGERYFTDDLRDVSGDRRLAILATCAVEWQAGLADAIVETHDRIVGRTWRDAKARCDVRIADAQAALQETLRTFSDLGAALLEAHGDDAPLDGAVASSCGWEKLQGLVAAASSLTDTMAADPLAHVVQGYLRFRRYAPRMIRALDIRAAQVAEPLLAAAKMIVQDAPAGPRPTTFLRRSSRWHRHLQRQEAGDHRLWQVAVLFQLRDAFRSGDIWLAHSRRYADLKEVLVPIAAAQATARLAVPFDPADWLADRKARMAQALKRLASAAKAGAMPGGSIEDGTLKIERLTAAVPPEADELVLDLYRRLPEVRITDVLLEVDAATGFTDAFTHLRTGAPCADRIGLLNVLLAEGLNLGLSKMAEATDSHDYFQLSRLSRWHVESAAMNRALAMVIEAQATLPMARFWGAGFTASSDGQFFPAARQGEAMNLVNAKYGSEPGVKAYTHVSDQFGPFATQTIPATVNEAPYILDGLLMNEQGRRVRENFADTGGFTDHVFAITAALGFRFVPRIRDLPSKRLYVFDPASVPKELKGLIGGKVREGTITSNWPDILRSAATMVAGVLPPSQLLRKFAAYPRQHDLAVALREIGRVERTLFIIEWLLDADLQRRAQIGLNKGEAHHSLKNALRIGRQGEIRDRTAEGQHYRMAGLNLLAAIIIYWNTAHLGRAVVERQNAGLACPPELLAHTSPLGWAHILLTGEYRWPKQ
SIO_010081: LV780_RS21780
subclass of: SO_0000673
so part of: LV780_RS21780
location: complement(16932..19817)
location: region:16932-19817:-1
so has part: feature:16932-19817:-1:exon

WP_117345320.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:16932-19817:-1:exon

LV780_RS21785
type: Gene
subclass of: SO_0000704
RO_0002162: 43057
locus tag: LV780_RS21785
old locus tag: LV780_21785
so part of: sequence
location: complement(19903..20337)
location: region:19903-20337:-1
so has part: feature:19903-20337:-1:exon
subclass of: SO_0000010

position:19903:-1
position: 19903
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:20337:-1
position: 20337
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:19903-20337:-1:exon

LV780_RS21785
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 43057
locus tag: LV780_RS21785
old locus tag: LV780_21785
inference: COORDINATES: similar to AA sequence:RefSeq:WP_005221592.1
GO function: GO:0003700 - DNA-binding transcription factor activity [Evidence IEA]
GO process: GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: MarR family transcriptional regulator
translation: MPFDREASAGYLANHMARLFARHLEARLKPHGLALGAFPALLHLWEQDGLTQRDLVERLGIEQPTMAATLTRMERDGLITRHRDEGDGRMQRVRLTERARGLRDAAVTEAGDVNAVATRMLTAEEKQQFITLLRKVIEALEQDR
SIO_010081: LV780_RS21785
subclass of: SO_0000673
so part of: LV780_RS21785
location: complement(19903..20337)
location: region:19903-20337:-1
so has part: feature:19903-20337:-1:exon

WP_117345321.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:19903-20337:-1:exon

LV780_RS21790
type: Gene
subclass of: SO_0000704
RO_0002162: 43057
locus tag: LV780_RS21790
old locus tag: LV780_21790
so part of: sequence
location: 20405..20851
location: region:20405-20851:1
so has part: feature:20405-20851:1:exon
subclass of: SO_0000010

position:20405:1
position: 20405
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:20851:1
position: 20851
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:20405-20851:1:exon

LV780_RS21790
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 43057
locus tag: LV780_RS21790
old locus tag: LV780_21790
inference: COORDINATES: similar to AA sequence:RefSeq:WP_016446722.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MIPRLHKAAGLLAILTIATFWLSTAATELLLGKDAVTTVKVLIPWGFLILVPAMITAGATGMKLAKGRTGGILGAKRKRMPFIAANGLLVLIPAALFLAAKARAGEFDGTFQAVQTVELVVGALNILMMARNIRDGRTMTAGRRLKAA
SIO_010081: LV780_RS21790
subclass of: SO_0000673
so part of: LV780_RS21790
location: 20405..20851
location: region:20405-20851:1
so has part: feature:20405-20851:1:exon

WP_117345322.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:20405-20851:1:exon

LV780_RS21795
type: Gene
subclass of: SO_0000704
RO_0002162: 43057
locus tag: LV780_RS21795
old locus tag: LV780_21795
so part of: sequence
location: 21014..21601
location: region:21014-21601:1
so has part: feature:21014-21601:1:exon
subclass of: SO_0000010

position:21014:1
position: 21014
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:21601:1
position: 21601
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:21014-21601:1:exon

LV780_RS21795
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 43057
locus tag: LV780_RS21795
old locus tag: LV780_21795
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013573044.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: recombinase family protein
translation: MTRTLIGYARCSTDKQDLEAQRQALAALGVAEDRIYTDHGMTGTNRTRPGLDQALAAVREGDTLVVSKLDRLARSVPDARAIADQLAAKGVRLALGAVVHDPTDPMGKMFFNILATFAEFEADLIRARTREGMAIARARGKLRGKQPKLSEKQQKELRRMHGSGDYSISDLAELFSVSRPTVYRTLNRASRPVGH
SIO_010081: LV780_RS21795
subclass of: SO_0000673
so part of: LV780_RS21795
location: 21014..21601
location: region:21014-21601:1
so has part: feature:21014-21601:1:exon

WP_117345301.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:21014-21601:1:exon

LV780_RS21800
type: Gene
subclass of: SO_0000704
RO_0002162: 43057
locus tag: LV780_RS21800
old locus tag: LV780_21800
so part of: sequence
location: 22304..23098
location: region:22304-23098:1
so has part: feature:22304-23098:1:exon
subclass of: SO_0000010

position:22304:1
position: 22304
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:23098:1
position: 23098
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:22304-23098:1:exon

LV780_RS21800
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 43057
locus tag: LV780_RS21800
old locus tag: LV780_21800
inference: COORDINATES: protein motif:HMM:NF012464.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: recombinase family protein
translation: MKGMTGRGAEVAAGGKGTEALRAVGYVRVSTPRQGERGISLSAQEAAIRTFAGCMGWDVIDIFHDVHTGAGPDSFIERKNLLEALKLAQAENAYVVTDNWARLTRHEDTSADIKRLFPDTDRLVSIKEANTFTEAARLGQIARAEAERNEISRRTKAGLARLKDQGVRFGNPNILEAQVKGAQAITEKADAIVRQIADVLRSQERHHSQLTCREVAELLNQKGVRTGQNLEWTTDRLHPKLRKARAILDAEQVSYTNDPLYGAF
SIO_010081: LV780_RS21800
subclass of: SO_0000673
so part of: LV780_RS21800
location: 22304..23098
location: region:22304-23098:1
so has part: feature:22304-23098:1:exon

WP_108222591.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:22304-23098:1:exon

LV780_RS21805
type: Gene
subclass of: SO_0000704
RO_0002162: 43057
locus tag: LV780_RS21805
old locus tag: LV780_21805
so part of: sequence
location: complement(23148..24506)
location: region:23148-24506:-1
so has part: feature:23148-24506:-1:exon
subclass of: SO_0000010

position:23148:-1
position: 23148
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:24506:-1
position: 24506
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:23148-24506:-1:exon

LV780_RS21805
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 43057
locus tag: LV780_RS21805
old locus tag: LV780_21805
inference: COORDINATES: protein motif:HMM:NF013691.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: GIY-YIG nuclease family protein
translation: MVDGISTDLQAFYEALEGQTQPGVAYRVFWKRVRTLEGRLLELEAGIGRKVALTRELLTMAALSCPVEWRHGWGASRLSPLEHEGRVYPTRLAFVHAAGRMADRKMIVARLKRGVSPGAALEPRIDPARGGFVYLIRHLTSGRGYVGASTTTLDLRWDAHCRQARMGSTKRFHLAIREYGEGAFSRDILRDGIRGEALLADIERSLIAQLGTLWPQGFNANRGGATSRGRTRPCFHEGEEFASAEERNKILGERHGVPAYVIANRLRSGLDLRGPSRKRHAEHLGNAVWQRQWLGILRRADRGEFHVHDPWRTALGWLMDIRPGEHEGLELVRLDPTGPFAPGNVAWVTEAEKIERVHGKDTACFDRRYPSIRALAAAFDIGESTLKHRLFVQKMTREEAVTKKKGTTLAKQIVMDGVCYPSLHKAAEAYARRRGTSYEKARYMVRKLAASG
SIO_010081: LV780_RS21805
subclass of: SO_0000673
so part of: LV780_RS21805
location: complement(23148..24506)
location: region:23148-24506:-1
so has part: feature:23148-24506:-1:exon

WP_181318580.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:23148-24506:-1:exon

LV780_RS21810
type: Gene
subclass of: SO_0000704
RO_0002162: 43057
locus tag: LV780_RS21810
old locus tag: LV780_21810
so part of: sequence
location: 25289..26068
location: region:25289-26068:1
so has part: feature:25289-26068:1:exon
subclass of: SO_0000010

position:25289:1
position: 25289
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:26068:1
position: 26068
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:25289-26068:1:exon

LV780_RS21810
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 43057
locus tag: LV780_RS21810
old locus tag: LV780_21810
inference: COORDINATES: protein motif:HMM:NF012464.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: recombinase family protein
translation: MHDYMHSDASNQRPRFVGYVRVSTARQEENGSLEAQAERIRQWAVARGMQPVSIHAETASGRGSVDEIRRPVLHEAFREARQLGLPLVVTKADRLFRNVAEAEGFMRQCGVPVISIGDGGEISEAVLLATVRKGECSVNNIVRGTVAALEGRREAGVALGSRGDNKAAARASARVRSDKAHALVQRIARFLGEDPGRQKLTDAELAEALNHAGIYTGRNRPWTVPALRRPRRSALEILRMEAEPDDDNPYKDNPNFGRF
SIO_010081: LV780_RS21810
subclass of: SO_0000673
so part of: LV780_RS21810
location: 25289..26068
location: region:25289-26068:1
so has part: feature:25289-26068:1:exon

WP_108222589.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:25289-26068:1:exon

LV780_RS21815
type: Gene
subclass of: SO_0000704
RO_0002162: 43057
locus tag: LV780_RS21815
old locus tag: LV780_21815
so part of: sequence
location: complement(26369..26770)
location: region:26369-26770:-1
so has part: feature:26369-26770:-1:exon
subclass of: SO_0000010

position:26369:-1
position: 26369
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:26770:-1
position: 26770
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:26369-26770:-1:exon

LV780_RS21815
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 43057
locus tag: LV780_RS21815
old locus tag: LV780_21815
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006724061.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MKEPKSGDIWRYPYLWDWQAEQGEEDGRKNRQSLVLMAIAKDNQIYFLSITSQPPRPGQTRIEVPEMERRRAKLDDKRLWVVLEEYNRDSLTDSLYFQPDGYLGEFSKGFMKIIRATFAVQLRARKAKEVARR
SIO_010081: LV780_RS21815
subclass of: SO_0000673
so part of: LV780_RS21815
location: complement(26369..26770)
location: region:26369-26770:-1
so has part: feature:26369-26770:-1:exon

WP_108222588.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:26369-26770:-1:exon

LV780_RS21820
type: Gene
subclass of: SO_0000704
RO_0002162: 43057
locus tag: LV780_RS21820
old locus tag: LV780_21820
so part of: sequence
location: complement(26789..27052)
location: region:26789-27052:-1
so has part: feature:26789-27052:-1:exon
subclass of: SO_0000010

position:26789:-1
position: 26789
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:27052:-1
position: 27052
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:26789-27052:-1:exon

LV780_RS21820
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 43057
locus tag: LV780_RS21820
old locus tag: LV780_21820
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011910980.1
GO process: GO:0008219 - cell death [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: type II toxin-antitoxin system prevent-host-death family antitoxin
translation: MPEAKIMEEFPKTALSRKVGDVFAAAATGPVSLTDHGKPRFVVMSVADFERMAGRVDSRIARRTEDTPPDEADRMIAELERLNMEDE
SIO_010081: LV780_RS21820
subclass of: SO_0000673
so part of: LV780_RS21820
location: complement(26789..27052)
location: region:26789-27052:-1
so has part: feature:26789-27052:-1:exon

WP_108222587.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:26789-27052:-1:exon

LV780_RS21825
type: Gene
subclass of: SO_0000704
RO_0002162: 43057
locus tag: LV780_RS21825
old locus tag: LV780_21825
so part of: sequence
location: complement(27133..27297)
location: region:27133-27297:-1
so has part: feature:27133-27297:-1:exon
subclass of: SO_0000010

position:27133:-1
position: 27133
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:27297:-1
position: 27297
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:27133-27297:-1:exon

LV780_RS21825
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 43057
locus tag: LV780_RS21825
old locus tag: LV780_21825
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MPKPSRTYEMVVRYRTQKTLPIKARSRQEAIEKAGKRCEKLGIDDRAGGALPRG
SIO_010081: LV780_RS21825
subclass of: SO_0000673
so part of: LV780_RS21825
location: complement(27133..27297)
location: region:27133-27297:-1
so has part: feature:27133-27297:-1:exon

WP_181318579.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:27133-27297:-1:exon

LV780_RS21830
type: Gene
subclass of: SO_0000704
RO_0002162: 43057
locus tag: LV780_RS21830
old locus tag: LV780_21830
so part of: sequence
location: 27480..27788
location: region:27480-27788:1
so has part: feature:27480-27788:1:exon
subclass of: SO_0000010

position:27480:1
position: 27480
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:27788:1
position: 27788
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:27480-27788:1:exon

LV780_RS21830
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 43057
locus tag: LV780_RS21830
old locus tag: LV780_21830
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MQPSCSSASITPLQPLRPQVSPDITPVDFARARIAANSREPHLELRRQLPEARRFVANLREFQDVFETKPLLIDALIERRQDGRDYIQSLREQKEPLVLLAP
SIO_010081: LV780_RS21830
subclass of: SO_0000673
so part of: LV780_RS21830
location: 27480..27788
location: region:27480-27788:1
so has part: feature:27480-27788:1:exon

WP_108222586.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:27480-27788:1:exon

LV780_RS21835
type: Gene
subclass of: SO_0000704
RO_0002162: 43057
locus tag: LV780_RS21835
old locus tag: LV780_21835
so part of: sequence
location: complement(28306..29469)
location: region:28306-29469:-1
so has part: feature:28306-29469:-1:exon
subclass of: SO_0000010

position:28306:-1
position: 28306
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:29469:-1
position: 29469
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:28306-29469:-1:exon

LV780_RS21835
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 43057
locus tag: LV780_RS21835
old locus tag: LV780_21835
inference: COORDINATES: similar to AA sequence:RefSeq:WP_005369607.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF4268 domain-containing protein
translation: MFQVDRFQNRLRKLECVSFSELGYREREHLQEWLAAMPEALCGSMSEGEDGLLIIQKEFDGFDGTRERLDLLALDKQGQLVVIENKLDDSGRDVVWQALKYAAYCSSLKKVEIVGIFQQYLDRNGGGDAARTICEFLGEDTLDEVVLNDGISQRVVFIAANFRREVTATVLWLREHQIDARCIKVLPYRFGDEIFIDLQQVIPTPEAADYMVRMAQKESEEKSASSAQSLRHTIRMDFWQRALDRLRADGSSRHHNVGPTKETWLGVGTGVSGCSYTLVLLKTLVRVELTIQRGSTQENKWLFDQLHAQREELEQAFGATLEWHRNDDQKRCLINISEPCDGFDKGQWPDMIAWMSSHMRRLEAAFSAPLAKLNQRLKAGEATGSGR
SIO_010081: LV780_RS21835
subclass of: SO_0000673
so part of: LV780_RS21835
location: complement(28306..29469)
location: region:28306-29469:-1
so has part: feature:28306-29469:-1:exon

WP_108222585.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:28306-29469:-1:exon

LV780_RS21840
type: Gene
subclass of: SO_0000704
RO_0002162: 43057
gene: vapC
locus tag: LV780_RS21840
old locus tag: LV780_21840
so part of: sequence
location: complement(29756..30163)
location: region:29756-30163:-1
so has part: feature:29756-30163:-1:exon
subclass of: SO_0000010

position:29756:-1
position: 29756
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:30163:-1
position: 30163
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:29756-30163:-1:exon

LV780_RS21840
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 43057
gene: vapC
locus tag: LV780_RS21840
old locus tag: LV780_21840
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011331362.1
GO function: GO:0004540 - ribonuclease activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: tRNA(fMet)-specific endonuclease VapC
translation: MLRYMLDTNILIYTIRNRPGEVRAKFEAHHGTMCISTVTAMELIFGAQKSQAVERNMAAVEGLLARLDILDLDLAAAQHAGEIRAQLARAGTPIGPFDVMIAGHARSRGLVLVSNNTREFERVDGLRLENWVQPS
SIO_010081: LV780_RS21840
subclass of: SO_0000673
so part of: LV780_RS21840
location: complement(29756..30163)
location: region:29756-30163:-1
so has part: feature:29756-30163:-1:exon

WP_108222584.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:29756-30163:-1:exon

LV780_RS21845
type: Gene
subclass of: SO_0000704
RO_0002162: 43057
gene: vapB
locus tag: LV780_RS21845
old locus tag: LV780_21845
so part of: sequence
location: complement(30163..30372)
location: region:30163-30372:-1
so has part: feature:30163-30372:-1:exon
subclass of: SO_0000010

position:30372:-1
position: 30372
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:30163-30372:-1:exon

LV780_RS21845
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 43057
gene: vapB
locus tag: LV780_RS21845
old locus tag: LV780_21845
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011331361.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: type II toxin-antitoxin system VapB family antitoxin
translation: MNNRTQAIRLPKSVALPEGTRSVDIVRLGRAWLIVPSQDSWAQWFDEVSSSEDFMERREQPDADERDDL
SIO_010081: LV780_RS21845
subclass of: SO_0000673
so part of: LV780_RS21845
location: complement(30163..30372)
location: region:30163-30372:-1
so has part: feature:30163-30372:-1:exon

WP_181318578.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:30163-30372:-1:exon

LV780_RS21850
type: Gene
subclass of: SO_0000704
RO_0002162: 43057
locus tag: LV780_RS21850
old locus tag: LV780_21850
so part of: sequence
location: 30564..31091
location: region:30564-31091:1
so has part: feature:30564-31091:1:exon
subclass of: SO_0000010

position:30564:1
position: 30564
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:31091:1
position: 31091
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:30564-31091:1:exon

LV780_RS21850
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 43057
locus tag: LV780_RS21850
old locus tag: LV780_21850
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MAMTAAERKRKQVARQKEERQLLADATYPYLGTPFFEVVEENGNWSSVTLALELAGLEPPVFQDDSGPLENAFPVALPSDEEDRINTFCGAAGSIGRAEVLVDCLLDAATELAQIINDYKRSELRKFRQQTEAQDLSDPAARKKALQDLLRIEKMEGMLAKKVRRELPVWSVKLD
SIO_010081: LV780_RS21850
subclass of: SO_0000673
so part of: LV780_RS21850
location: 30564..31091
location: region:30564-31091:1
so has part: feature:30564-31091:1:exon

WP_108222583.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:30564-31091:1:exon

LV780_RS21855
type: Gene
subclass of: SO_0000704
RO_0002162: 43057
locus tag: LV780_RS21855
old locus tag: LV780_21855
so part of: sequence
location: 31255..33036
location: region:31255-33036:1
so has part: feature:31255-33036:1:exon
subclass of: SO_0000010

position:31255:1
position: 31255
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:33036:1
position: 33036
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:31255-33036:1:exon

LV780_RS21855
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 43057
locus tag: LV780_RS21855
old locus tag: LV780_21855
inference: COORDINATES: protein motif:HMM:NF017826.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF927 domain-containing protein
translation: MSGTESACQNESVSSAPSPLTSSRPSGMPAGYTVGSDGSIYCRVTNKDGEDETEVFLCSPLKVKALARDVDGVNWTTLVEVTDPDGRIHEVDVPNVELTGTGTLLRKRLSRAGARISIDKEAGTLLVRLLHDWTPQARLFTTNRAGWIADCRSFVTGSGRIIGAQDVRFTGGHLASVAAEMKSAGSIADWREKVGALCVGNPLMMVSVSLAFAGVLLEPLGFEGGGLHLRGGSSCGKTTIQRVAASVWGSPGFALTWRATSNGLEGIAAACNSSLLVLDELAQISARDADEASYMLANGRGKARANMSGATVRPLNWRLMVLSSGEISLARKLAESGREAMAGQNVRLLDIEADARPYGAFDSLHGQPDGARFSQHAKAMSSTFHGTAGPLFVKGVLEKLDVCKEVVPRLVTGFRQRAVDRFGSLDDGPIQRAVDRLALCAAAGELATKFGLTGWNREEPKEAALEVLGIWLEGREGDVREEIEASVERTRAFLKANSARFAEAARGSVPADTLGWRDGHFFYIAPEAWKQAHDGHDPIRSARHLADAGLLVRGEGDNLPRKLPRGIGSVRTRAYTIRTLILKEGEPAQPLAA
SIO_010081: LV780_RS21855
subclass of: SO_0000673
so part of: LV780_RS21855
location: 31255..33036
location: region:31255-33036:1
so has part: feature:31255-33036:1:exon

WP_108222582.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:31255-33036:1:exon

LV780_RS21860
type: Gene
subclass of: SO_0000704
RO_0002162: 43057
locus tag: LV780_RS21860
old locus tag: LV780_21860
pseudo: true
so part of: sequence
location: 33358..>33522
location: region:33358-33522:1
so has part: feature:33358-33522:1:exon
subclass of: SO_0000010

position:33358:1
position: 33358
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:33522:1
position: 33522
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:33358-33522:1:exon

LV780_RS21860
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 43057
locus tag: LV780_RS21860
old locus tag: LV780_21860
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011907535.1
note: incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: IS5/IS1182 family transposase
SIO_010081: LV780_RS21860
subclass of: SO_0000673
so part of: LV780_RS21860
location: 33358..>33522
location: region:33358-33522:1
so has part: feature:33358-33522:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:33358-33522:1:exon

LV780_RS21865
type: Gene
subclass of: SO_0000704
RO_0002162: 43057
locus tag: LV780_RS21865
old locus tag: LV780_21865
so part of: sequence
location: 33930..35069
location: region:33930-35069:1
so has part: feature:33930-35069:1:exon
subclass of: SO_0000010

position:33930:1
position: 33930
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:35069:1
position: 35069
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:33930-35069:1:exon

LV780_RS21865
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 43057
locus tag: LV780_RS21865
old locus tag: LV780_21865
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MIKKMPNMKIRIEKINGNSAIKSFLNPEIAGHASNGKVTLSGWAYSAAGVVRDVVVKSNGTIFKTGINIFRQDVERHLQKMNFSNISQPLGYKFDFLFTAGMELGYEVNGTCEWIYRLHANDLVEFRQFDSITDLLDTAEGVCGNVYFHNADDWSKIIVMFNGALTPGKVAAEKAIFQRWSWAKHFKHPVAVIADPLTIDKNPIHLGWYLGATGRNALPEMVGPLLASIREKSPDSKIVAFGSSGGGFAAIGGTLLGLFDEAIAINPQVDVLKFEVRDAVDRFMKKRGGMPCDSDLKSYKFSRIKACGKIRYVQNRSDHHHFEIHYRPFRNLCLASDMVDKISFTEYDDEKAGHMPPHLPALTKIVGEPFSILLKKPTA
SIO_010081: LV780_RS21865
subclass of: SO_0000673
so part of: LV780_RS21865
location: 33930..35069
location: region:33930-35069:1
so has part: feature:33930-35069:1:exon

WP_205025762.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:33930-35069:1:exon

LV780_RS21870
type: Gene
subclass of: SO_0000704
RO_0002162: 43057
locus tag: LV780_RS21870
old locus tag: LV780_21870
pseudo: true
so part of: sequence
location: 35315..>36655
location: region:35315-36655:1
so has part: feature:35315-36655:1:exon
subclass of: SO_0000010

position:35315:1
position: 35315
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:36655:1
position: 36655
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:35315-36655:1:exon

LV780_RS21870
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 43057
locus tag: LV780_RS21870
old locus tag: LV780_21870
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011908457.1
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: IS1634 family transposase
SIO_010081: LV780_RS21870
subclass of: SO_0000673
so part of: LV780_RS21870
location: 35315..>36655
location: region:35315-36655:1
so has part: feature:35315-36655:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:35315-36655:1:exon

LV780_RS21875
type: Gene
subclass of: SO_0000704
RO_0002162: 43057
locus tag: LV780_RS21875
old locus tag: LV780_21875
so part of: sequence
location: complement(36736..38382)
location: region:36736-38382:-1
so has part: feature:36736-38382:-1:exon
subclass of: SO_0000010

position:36736:-1
position: 36736
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:38382:-1
position: 38382
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:36736-38382:-1:exon

LV780_RS21875
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 43057
locus tag: LV780_RS21875
old locus tag: LV780_21875
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011908457.1
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: IS1634 family transposase
translation: MFIRITENGGRRYLQIMESYRNDAGKPRSRVIANLGRIDDRPDGHLDSLIRGLCKVTGRDAPEALRIEQEPGRAFGDVFALHELWKDLGFDRALARALRSGKRQLDVEALVRAMVFNRLCEPDSKLGCLRWLETVAMPAMPETVTHQHLLRAMDALMDHAERVEIELAKQIRPLVDRDLAVVFYDLTTVRIHGEAEIEDDLRAYGMNKEKGGIARQFVLGVVQTAEGLPLMHTVHPGNVAETKTLQAMLTTVLQRFPVERVVLVADRGLLSLDNIDTLTTLADQGGRKLEFILAVPARRYGELVETFRGLAFDKTGLSEARFAGHRLIVAHDPLRAAEQSEKRRARIAELEVMAERMVGKLNAQDAGQSDRGRRASDRGAYSRFTRAVAEAELTRFLRADFTADRFSWSLDETAIHEAELFDGKLALLTNAPDLTPAEAVARYKALADIERGFRVLKSDIEIAPVHHRLPDRIRAHALICFLALVLYRVMRMRLKAKGHTASPRTALDLLARIQRHRAKIGERTVNGLSVTTPQQMELFDTLNLPKPL
SIO_010081: LV780_RS21875
subclass of: SO_0000673
so part of: LV780_RS21875
location: complement(36736..38382)
location: region:36736-38382:-1
so has part: feature:36736-38382:-1:exon

WP_117344998.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:36736-38382:-1:exon

LV780_RS21880
type: Gene
subclass of: SO_0000704
RO_0002162: 43057
locus tag: LV780_RS21880
old locus tag: LV780_21880
so part of: sequence
location: complement(38559..41687)
location: region:38559-41687:-1
so has part: feature:38559-41687:-1:exon
subclass of: SO_0000010

position:38559:-1
position: 38559
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:41687:-1
position: 41687
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:38559-41687:-1:exon

LV780_RS21880
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 43057
locus tag: LV780_RS21880
old locus tag: LV780_21880
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012642309.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: rhamnan synthesis F family protein
translation: MNEPTDHAAIIHVWHLDVLDDLTEALEHLHETADQFVTLPVSFGQEQRDRVTAAFPKAMIVEVENRGQDIGALFQLMQKVNLGRYDFICKIHTKKGPNMPEEWRRALLDGVLGSKRQVTHIVESFRADPKVMLAGARQLFVFGPAYLEPNAEKLAENYAPLIGDFDVRSEDWGFIAGTCFWIRTSILQDMAACAVEFLPADYVTDGAPAHAAERMFGLSVALRGGTVLLQDLRFADRLPEAETGFPADLPRNWRRLAQILTPLAVNLFIRPRYRPTEAQPAPRRRVAVFASYTGDGILPPQVVPYLEGLRHLTEAIVVVCDNDLQSGEAAKLSGLAAHVITGRHGEYDFGSYKRGVAWLEKAGMLTKADDLILCNDSCYGPIGSFAPMFAEMEAKGLDFWGATDSREIDYHLQSYFVVLTRRVFSSETFRKFISSVEKQPNVQEVIKKYEIGMTQTLVKAGFSSGAMVANTLAGVHEKDPTSRNLTLFPLYTLNRGLPLLKVKALTKPSSNANGAAAIFDWLAENAPDIHAVAMSEFEVMKFAATSKIGFSVIMPTYNRAWCIGRAIRAVLAQTHRNFELIIVDDGSTDDTEQEVRRRFPDEIASGRIVYVRLERNVGVCKARNIGMMRARADWIAYADSDNEVRPYFLNMFAHAIIQHPGKDTVYGRFINVNSGNIIGIAFENGDVLRGNFIDLGVFAHRRSLMGKLGCFDDSLRRLVDWDLVIRYTRHDVPSYIDKILLDYVDEERNDRISVGESYVKANIQVHRKHSPLPTVSTIIVSYNHLEFIVEAIESALAQKGNFHHEILLSDDGSTDGTARIMARYAEKYPMRIRNISRGGNHGVSANYRHCFAEAQGEFVAVLEGDDYWSDPEKLAKQAAFLREHAEAAMVLSRIELLDMKSGKRRLLKRQEGLPNIISGKHFSENQHLNLIVNFSCCMFRTDIMQHLPDMMYDPRLSEIPLAFYLDRLGGIGFLSDVMSTYRLNDKSVWTGASMANKHRQAIDVRQTALRVARPIYQATIQRHIEARQKQLEAELFKNAVAA
SIO_010081: LV780_RS21880
subclass of: SO_0000673
so part of: LV780_RS21880
location: complement(38559..41687)
location: region:38559-41687:-1
so has part: feature:38559-41687:-1:exon

WP_108222751.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:38559-41687:-1:exon

LV780_RS21885
type: Gene
subclass of: SO_0000704
RO_0002162: 43057
locus tag: LV780_RS21885
old locus tag: LV780_21885
pseudo: true
so part of: sequence
location: 41982..>42263
location: region:41982-42263:1
so has part: feature:41982-42263:1:exon
subclass of: SO_0000010

position:41982:1
position: 41982
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:42263:1
position: 42263
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:41982-42263:1:exon

LV780_RS21885
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 43057
locus tag: LV780_RS21885
old locus tag: LV780_21885
inference: COORDINATES: similar to AA sequence:RefSeq:WP_076611693.1
GO function: GO:0003677 - DNA binding [Evidence IEA]; GO:0004803 - transposase activity [Evidence IEA]
GO process: GO:0006313 - transposition, DNA-mediated [Evidence IEA]
note: frameshifted; incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: transposase
SIO_010081: LV780_RS21885
subclass of: SO_0000673
so part of: LV780_RS21885
location: 41982..>42263
location: region:41982-42263:1
so has part: feature:41982-42263:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:41982-42263:1:exon

LV780_RS21890
type: Gene
subclass of: SO_0000704
RO_0002162: 43057
locus tag: LV780_RS21890
old locus tag: LV780_21890
so part of: sequence
location: complement(42351..42683)
location: region:42351-42683:-1
so has part: feature:42351-42683:-1:exon
subclass of: SO_0000010

position:42351:-1
position: 42351
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:42683:-1
position: 42683
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:42351-42683:-1:exon

LV780_RS21890
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 43057
locus tag: LV780_RS21890
old locus tag: LV780_21890
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012457146.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: stability/partitioning determinant
translation: MSRQRADLGFSSALDDLGNFGPEPAPRPKPSPGEAKQAAEAAGFRSRDPQPPSEPAKPLRRRRTGRNAQFNLKARPETIEAFCSVADAHGWGLGETLEKAVELLLDRYGK
SIO_010081: LV780_RS21890
subclass of: SO_0000673
so part of: LV780_RS21890
location: complement(42351..42683)
location: region:42351-42683:-1
so has part: feature:42351-42683:-1:exon

WP_108222752.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:42351-42683:-1:exon

LV780_RS21895
type: Gene
subclass of: SO_0000704
RO_0002162: 43057
locus tag: LV780_RS21895
old locus tag: LV780_21895
so part of: sequence
location: complement(42680..43357)
location: region:42680-43357:-1
so has part: feature:42680-43357:-1:exon
subclass of: SO_0000010

position:42680:-1
position: 42680
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:43357:-1
position: 43357
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:42680-43357:-1:exon

LV780_RS21895
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 43057
locus tag: LV780_RS21895
old locus tag: LV780_21895
inference: COORDINATES: similar to AA sequence:RefSeq:WP_009820269.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ParA family protein
translation: MPVISFANPKGGAGKTTTALILATQLAENGASVSIVDADPERWISQWASLPGKPDAIRIVNGVTEDSIVDVVEEEAARCQFVIVDLEGTASLMVANAIGMSDLVLIPAQGSNMDAKGGAKTIRLIANQSRLARRKIPHRVVLTRTSAAVRSRTLRNVQEQLEASGIEVLQTSIVERAAFRDLFDFGGTLSSLDPAQVSNLPKAIENAREFAGEVVTLLKTERELA
SIO_010081: LV780_RS21895
subclass of: SO_0000673
so part of: LV780_RS21895
location: complement(42680..43357)
location: region:42680-43357:-1
so has part: feature:42680-43357:-1:exon

WP_108222753.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:42680-43357:-1:exon