Cereibacter azotoformans strain SY5 plasmid p3, complete sequence.
type: Entry
definition: Cereibacter azotoformans strain SY5 plasmid p3, complete sequence.
sequence version: NZ_CP090025.1
sequence date: 2022-12-08
sequence: sequence
division: CON
label: NZ_CP090025.1
type: RefSeq
SIO_000068: refseq
dblink: PRJNA224116
dblink: SAMN24182653
keyword: RefSeq
source: Cereibacter azotoformans
organism: Cereibacter azotoformans
taxonomy: Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodobacterales; Paracoccaceae; Cereibacter.
reference: 1
reference: 2
comment: REFSEQ INFORMATION: The reference sequence is identical to\nCP090025.1.\nThe annotation was added by the NCBI Prokaryotic Genome Annotation\nPipeline (PGAP). Information about PGAP can be found here:\nhttps://www.ncbi.nlm.nih.gov/genome/annotation_prok/\n\n##Genome-Assembly-Data-START##\nAssembly Method :: canu v. 1.3\nGenome Representation :: Full\nExpected Final Version :: Yes\nGenome Coverage :: 165.02x\nSequencing Technology :: Illumina HiSeq; PacBio RSII\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI RefSeq\nAnnotation Date :: 12/08/2022 17:54:21\nAnnotation Pipeline :: NCBI Prokaryotic Genome\n Annotation Pipeline (PGAP)\nAnnotation Method :: Best-placed reference protein\n set; GeneMarkS-2+\nAnnotation Software revision :: 6.3\nFeatures Annotated :: Gene; CDS; rRNA; tRNA; ncRNA\nGenes (total) :: 4,393\nCDSs (total) :: 4,323\nGenes (coding) :: 4,157\nCDSs (with protein) :: 4,157\nGenes (RNA) :: 70\nrRNAs :: 4, 4, 4 (5S, 16S, 23S)\ncomplete rRNAs :: 4, 4, 4 (5S, 16S, 23S)\ntRNAs :: 55\nncRNAs :: 3\nPseudo Genes (total) :: 166\nCDSs (without protein) :: 166\nPseudo Genes (ambiguous residues) :: 0 of 166\nPseudo Genes (frameshifted) :: 80 of 166\nPseudo Genes (incomplete) :: 131 of 166\nPseudo Genes (internal stop) :: 25 of 166\nPseudo Genes (multiple problems) :: 61 of 166\nCRISPR Arrays :: 1\n##Genome-Annotation-Data-END##\nCOMPLETENESS: full length.

sequence
subclass of: SO_0000155
sequence length: 49699
topology: circular
so has quality: SO_0000988
location: 1..49699
location: region:1-49699:1
RO_0002162: 43057

NZ_CP090025
type: RefSeq
SIO_000068: refseq

PRJNA224116
type: BioProject
SIO_000068: bioproject

SAMN24182653
type: BioSample
SIO_000068: biosample

1
title: Isolation, Identification and Complete Genome Analysis of Rhodobacter sphaeroides SY5 with Enhancing Effect on Disease Resistance of Eriocheir sinensis
author: Zhang, S.
journal: Unpublished

2
title: Direct Submission
author: Zhang, S.
journal: Submitted (18-DEC-2021) National Pathogen Collection Center for Aquatic Animals, Shanghai Ocean University, No.999,Hucheng ring road, Shanghai 201306, China

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:49699:1
position: 49699
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-49699:1:source
so part of: sequence
organism: Cereibacter azotoformans
mol type: genomic DNA
strain: SY5
isolation source: Aquaculture sediment
plasmid: p3
collection date: 2021-04

43057
type: Taxonomy
SIO_000068: taxonomy

LV780_RS21460
type: Gene
subclass of: SO_0000704
RO_0002162: 43057
locus tag: LV780_RS21460
old locus tag: LV780_21460
so part of: sequence
location: join(48737..49699,1..1392)
location: region:1-49699:1
so has part: feature:48737-49699:1:exon
so has part: feature:1-1392:1:exon
subclass of: SO_0000010

urn:…
SIO_000300: 1
SIO_000628: feature:48737-49699:1:exon

position:48737:1
position: 48737
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1-1392:1:exon

position:1392:1
position: 1392
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LV780_RS21460
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 43057
locus tag: LV780_RS21460
old locus tag: LV780_21460
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011911232.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: VirB4 family type IV secretion system protein
translation: MGFGKKIATELVADRYLPFIRHSDEHTIITRSRGAFQMLKLDGVSFRTADTSAINTFHNGLNHAIRNIAADNVMVYVHVIHTPDAEYPGGTFQSATAGWIDESYRGRLETRRLFRNDLYLTIYMQPRVAPGMSLARGVRRARTSEVEVDRDLLTELDDKANQLLRTLARFNPRKLSIIRNERGLLISEPASVLRQIITGRHEPVPVVHGTIGSAIHTERVIFGREALEIRHADASTYGAIFAVKEYHALTRPNMFDDMLTAPFSFVLTQSFRCVAKNMALRQMALKEGRMRNAGDPALSQADQLIAARDELMSGKFVMGEHNLTLLVLCETPAELKNRVADARNLLADSGAVVAREDMGLESQFWSQLPGNHAFRARVALMTSRNFTAMAPLHNYPTGHRHGNEWGDAICKLQTSAGSPFYFNFHVGDLGHTFIAGPSGSGKTVLQTFLLSQLEKFGAKRILFDKDRGAEIFVRASGGSYLDFRNGAATGCAPFMALDMTPDTQAFMVELVKSMLGGDRAGFSADDQHRIEAAVQHLGALPVEQRTVRALRDLLGFGGGAEDIGSRLDRWTKSGRLGWVFDNPPDEIDFSADLVGFDITEFLDDAEIRNPIMMYLMRRIEQLIDGRRIAIFIDEFWKALTDPYFSDFIKNKLKVIRKQNGIIVAGTQSASDVIASPIARTIIEQCASQIWFGSDRASASDLVEHFGLSYREYEIVREELPRGHFLVKQGGNSIVCDLDLTGLEDVLTVLSGRTSTNAILTELRQTHPDPADWLPRLFQRRKETN
SIO_010081: LV780_RS21460
subclass of: SO_0000673
so part of: LV780_RS21460
location: join(48737..49699,1..1392)
location: region:1-49699:1
so has part: feature:48737-49699:1:exon
so has part: feature:1-1392:1:exon

WP_117345327.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:48737-49699:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1-1392:1:exon

LV780_RS21465
type: Gene
subclass of: SO_0000704
RO_0002162: 43057
locus tag: LV780_RS21465
old locus tag: LV780_21465
so part of: sequence
location: 1392..2111
location: region:1392-2111:1
so has part: feature:1392-2111:1:exon
subclass of: SO_0000010

position:2111:1
position: 2111
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1392-2111:1:exon

LV780_RS21465
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 43057
locus tag: LV780_RS21465
old locus tag: LV780_21465
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011911231.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: type IV secretion system protein
translation: MTHRLGIVAALSILLGASAASGQGVPVIDATSISNAKTQFTQQLAQMIKEFEEAQRLYSAINGATGMGDVVAMLNDPDVREVLGPDAQRIAASFDINLDDLGDLADTAKAVHAFASLEDENITAEGFYRSELDRIKKQAGRNTATGERIVNLSDDRLGGLERLRQQIGMVETQKEVDALNARIAIEQAMLQNDTNRIQGLSMLQAAQAQAEEQRQVELAAQRRQKEAAGFSATFGGTSF
SIO_010081: LV780_RS21465
subclass of: SO_0000673
so part of: LV780_RS21465
location: 1392..2111
location: region:1392-2111:1
so has part: feature:1392-2111:1:exon

WP_117345328.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1392-2111:1:exon

LV780_RS21470
type: Gene
subclass of: SO_0000704
RO_0002162: 43057
locus tag: LV780_RS21470
old locus tag: LV780_21470
so part of: sequence
location: 2120..2377
location: region:2120-2377:1
so has part: feature:2120-2377:1:exon
subclass of: SO_0000010

position:2120:1
position: 2120
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2377:1
position: 2377
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2120-2377:1:exon

LV780_RS21470
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 43057
locus tag: LV780_RS21470
old locus tag: LV780_21470
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011911230.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: EexN family lipoprotein
translation: MQKIFIVIAGAAIFLGLAGCKEEEKHPVAFFVENPAERAQRLADCELQDRSADDANCVNAREAERQAASERDAKGFQSTFGKPAF
SIO_010081: LV780_RS21470
subclass of: SO_0000673
so part of: LV780_RS21470
location: 2120..2377
location: region:2120-2377:1
so has part: feature:2120-2377:1:exon

WP_117345329.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2120-2377:1:exon

LV780_RS21475
type: Gene
subclass of: SO_0000704
RO_0002162: 43057
locus tag: LV780_RS21475
old locus tag: LV780_21475
so part of: sequence
location: 2399..3295
location: region:2399-3295:1
so has part: feature:2399-3295:1:exon
subclass of: SO_0000010

position:2399:1
position: 2399
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3295:1
position: 3295
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2399-3295:1:exon

LV780_RS21475
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 43057
locus tag: LV780_RS21475
old locus tag: LV780_21475
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011911229.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: type IV secretion system protein
translation: MLQMLYDNFVASLTDKMNTISSAISGELTAPLTAAMTLYIMLYGWAILRGSIHEPVMDFTIRGVKLAIIWTLVANAGDYSSWVGDTITNGIPAFVETIAGGAPASLPSDPVMAMAGEMSMAVQEAYGTGIAGSIYGYLMSMVVWLSAIPFAALAFVVSLLVHFGLTLLASIGPLFIGFALFDFSRGWFFAWLGQTLNFAILKLLVIVLMITITAFLGDVYTKVDIEAGAAAVAAFLVALACATLFFFLLPSIAAALSAGVGASTGVAQRFVERKILGGFGGGGLSGGSARSGSATRTS
SIO_010081: LV780_RS21475
subclass of: SO_0000673
so part of: LV780_RS21475
location: 2399..3295
location: region:2399-3295:1
so has part: feature:2399-3295:1:exon

WP_117345330.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2399-3295:1:exon

LV780_RS21480
type: Gene
subclass of: SO_0000704
RO_0002162: 43057
locus tag: LV780_RS21480
old locus tag: LV780_21480
so part of: sequence
location: 3339..3530
location: region:3339-3530:1
so has part: feature:3339-3530:1:exon
subclass of: SO_0000010

position:3339:1
position: 3339
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3530:1
position: 3530
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3339-3530:1:exon

LV780_RS21480
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 43057
locus tag: LV780_RS21480
old locus tag: LV780_21480
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MRNIILLVAVLGTAACSSTTPLPEVRGSTVRPLNPTKWDYEAAVAKKQREIGFGAGTGQGADA
SIO_010081: LV780_RS21480
subclass of: SO_0000673
so part of: LV780_RS21480
location: 3339..3530
location: region:3339-3530:1
so has part: feature:3339-3530:1:exon

WP_117345331.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3339-3530:1:exon

LV780_RS21485
type: Gene
subclass of: SO_0000704
RO_0002162: 43057
locus tag: LV780_RS21485
old locus tag: LV780_21485
so part of: sequence
location: 3527..4213
location: region:3527-4213:1
so has part: feature:3527-4213:1:exon
subclass of: SO_0000010

position:3527:1
position: 3527
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4213:1
position: 4213
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3527-4213:1:exon

LV780_RS21485
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 43057
locus tag: LV780_RS21485
old locus tag: LV780_21485
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011911228.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: type IV secretion system protein
translation: MIARDDKELAAYLKAARTFDYDQRLAAERSKRIAWALAGVASLLATASVAAVAALAPLKEVVPFVIRVDQATGVPEVMTALTDGRESYDEAVARYFLARYARVRESYSFAERQNIFHEVTLMSAPEVTRQFSEFFNATNPKSPQYLYGRDTHASIRIRSISFLGDQLAQVRFTRTERNEREKLKKETLWVSTIQFEFDPKAEISAEDRLVNPLGFVVRNYRVDPEVVQ
SIO_010081: LV780_RS21485
subclass of: SO_0000673
so part of: LV780_RS21485
location: 3527..4213
location: region:3527-4213:1
so has part: feature:3527-4213:1:exon

WP_117345332.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3527-4213:1:exon

LV780_RS21490
type: Gene
subclass of: SO_0000704
RO_0002162: 43057
gene: virB9
locus tag: LV780_RS21490
old locus tag: LV780_21490
so part of: sequence
location: 4210..5061
location: region:4210-5061:1
so has part: feature:4210-5061:1:exon
subclass of: SO_0000010

position:4210:1
position: 4210
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5061:1
position: 5061
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4210-5061:1:exon

LV780_RS21490
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 43057
gene: virB9
locus tag: LV780_RS21490
old locus tag: LV780_21490
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011911227.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: P-type conjugative transfer protein VirB9
translation: MMLKAGLLAGLLAATAGPALALDVPKPSNSDSRVRSVAYNEWDVVRVVGTIRTSVQIVFGQSEEVVDVAGGDTVSWEVVPRGNILYLKPREKNPPTNLQVATMRPDGTTRTYSFELIVREGEIMANSRDVYFQIRFAYPRDEAMARREAAAEQKARAREEAAKARLAHSVATAGEKNWMYLAAGATDLQPTEAYDNGEQTVLTFARRTRLPAVYLVDRNGEERLANTTVRRNQVIVHDVAPEIRLRLGKEVIAIYNVGPTYDRGGNTGTGTTSRTVNREIIGG
SIO_010081: LV780_RS21490
subclass of: SO_0000673
so part of: LV780_RS21490
location: 4210..5061
location: region:4210-5061:1
so has part: feature:4210-5061:1:exon

WP_117345333.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4210-5061:1:exon

LV780_RS21495
type: Gene
subclass of: SO_0000704
RO_0002162: 43057
gene: virB10
locus tag: LV780_RS21495
old locus tag: LV780_21495
so part of: sequence
location: 5183..6205
location: region:5183-6205:1
so has part: feature:5183-6205:1:exon
subclass of: SO_0000010

position:5183:1
position: 5183
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6205:1
position: 6205
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5183-6205:1:exon

LV780_RS21495
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 43057
gene: virB10
locus tag: LV780_RS21495
old locus tag: LV780_21495
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011911226.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: type IV secretion system protein VirB10
translation: MAAGIMFLGALAYLQWPSDEKPPEEEKVQEVSRLRPSRDFQPAEITEPQPAPGATAAPAAEPAKPAAPMGPIERARADTAAQAGPSEAQLLYESSQRAPLMAFSGNNNNNISQISGEPAVSGAGGLFGSGTGPEGGPLGLSAELVTSDRGAVKATRLAHPELTITQGTIIPCVLDTAMDSTAPGMVRCTVTDDVWSTTGSVILLDRGTRIVGEYRGGMQRGRKRMFVLWTRAETPHGVVVNLGSPAVDAVGRSGFSGDVDTQFWSRFGGTLMLSVIDSALIAAANENSSAETVTTNVGDLAQTELERMIDVPVILRKNQGEEVAVMVARDLDFSGVYRLR
SIO_010081: LV780_RS21495
subclass of: SO_0000673
so part of: LV780_RS21495
location: 5183..6205
location: region:5183-6205:1
so has part: feature:5183-6205:1:exon

WP_233864394.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:5183-6205:1:exon

LV780_RS21500
type: Gene
subclass of: SO_0000704
RO_0002162: 43057
gene: virB11
locus tag: LV780_RS21500
old locus tag: LV780_21500
so part of: sequence
location: 6202..7230
location: region:6202-7230:1
so has part: feature:6202-7230:1:exon
subclass of: SO_0000010

position:6202:1
position: 6202
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7230:1
position: 7230
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6202-7230:1:exon

LV780_RS21500
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 43057
gene: virB11
locus tag: LV780_RS21500
old locus tag: LV780_21500
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011911225.1
GO component: GO:0043684 - type IV secretion system complex [Evidence IEA]
GO process: GO:0044097 - secretion by the type IV secretion system [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: P-type DNA transfer ATPase VirB11
translation: MTSASPSLALTAFLAPIQPWLDRQDILEICINRPGEVFVEEPRGWERIALPALSYEFLSGLISTISSFARQKVNAEAPLLSASLPDGERVQVVLPPAVPAGTISLTIRKPAHRTFSLEALIGTGMFDAVETDPETLGADDAQLVALHRDRRWPEFLTAAVAAKKNILISGATGSGKTTLSKALIPLIPETERLITIEDTLELELPQPNVVRLIYSKGGQGDAKVTARDLLEASLRMRPDRIFLQELRDASAFYYLRNVNTGHSGSITTIHADSARLAFEQLALLVKESEAGRDLSRAEIKAMLVQMIDVVLQVKKTAHGRRVTEVWFDPRRKLEASAPEAAR
SIO_010081: LV780_RS21500
subclass of: SO_0000673
so part of: LV780_RS21500
location: 6202..7230
location: region:6202-7230:1
so has part: feature:6202-7230:1:exon

WP_233864409.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:6202-7230:1:exon

LV780_RS21505
type: Gene
subclass of: SO_0000704
RO_0002162: 43057
locus tag: LV780_RS21505
old locus tag: LV780_21505
so part of: sequence
location: 7227..9368
location: region:7227-9368:1
so has part: feature:7227-9368:1:exon
subclass of: SO_0000010

position:7227:1
position: 7227
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9368:1
position: 9368
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7227-9368:1:exon

LV780_RS21505
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 43057
locus tag: LV780_RS21505
old locus tag: LV780_21505
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011911224.1
GO component: GO:0016020 - membrane [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: type IV secretory system conjugative DNA transfer family protein
translation: MIVANWHRLGRPAKAAALASAAAFCIGGGLAAQAWVLHWGLKVPLALPRDLLLWPEAALAGYSDPLTVKWIKLAGLAGLLPTAALVAAILKTRPKVDLHGTAAFARESEIAAAGMRAKAGLIAGFTGPLPSPHYGKPVGRFGQLDEEHGRVKVEKKGRLNARNLLIYGGPEHMLLYAPTRSGKGVGVVVPNLLNWPDSAVVLDIKKENWQLTAGFRKAGGQEVFLFDPLDPEGRTHRWNPLASVRRGTAFQVEDLQRLADLFIPVASKDPFFDRAAQTAFVGVGGYLAETPGLPFTLGELYRQLTLTPNFVRTFKARIDERAEAGRPLSLQTVATLNDFLSKSENTFESVKSTITANLGLFANPILDRATAASDFDFADLRRKRMTIYVGITPNNLGRLGPLLNLFFQSCVDANMQELPEHNPALKHRVLLCMDEFAAVGELPAFKRGIGYFAGYGLKVLTIVQTPAQLADIYGSDGAEAYMDNAGITVVFTPKGLKEARNLSERLGTYGAEAVSTSRSKLLTSRNPPTISVSEQKRSLMMPQELLQLDQSEAIILAAGHPPIRAKKIRFYAEEAFLERSRIPPPEIPALRADATADDVRRLRDENRRMREDLSVLTAEVRRIAALKLAQAANVAAGQPAEVPMTDEEIAKPETISFDRLALAGDNMQAKIRSLAAAGTIGTKEGVAAILGEMGVAVPEEKGAKPKKEKVRHG
SIO_010081: LV780_RS21505
subclass of: SO_0000673
so part of: LV780_RS21505
location: 7227..9368
location: region:7227-9368:1
so has part: feature:7227-9368:1:exon

WP_233864412.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:7227-9368:1:exon

LV780_RS21510
type: Gene
subclass of: SO_0000704
RO_0002162: 43057
locus tag: LV780_RS21510
old locus tag: LV780_21510
so part of: sequence
location: 9361..10302
location: region:9361-10302:1
so has part: feature:9361-10302:1:exon
subclass of: SO_0000010

position:9361:1
position: 9361
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:10302:1
position: 10302
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9361-10302:1:exon

LV780_RS21510
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 43057
locus tag: LV780_RS21510
old locus tag: LV780_21510
inference: COORDINATES: protein motif:HMM:NF037421.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: LPD7 domain-containing protein
translation: MAETTDRVPPAPVSARTAVTPGTAEPIGPRRDGADRFATPASFADRFLITKAKDRQELFRSYDAALPAIIDTGDRLATKAADRATAMDMIDLAAHRGWKSLRVAGPEDFRREMWIEASAHGIRVDGYRATDRDIDEAWRRTEIMAERSSLARDPVPGKRPANGGDMPEKELDRAVRAEVARLRAEGHSRAHIAERSFEIEDGVRQRWAEAQAARPSYAEGLRGTIAATGTAPYKDREGAMHVPFARLALDSGGEHTLWSVSLPPKFDSKTAKQLMSLWRNEPLCDYTAFVRGVLAGSGCRRVPSVEALSQRAH
SIO_010081: LV780_RS21510
subclass of: SO_0000673
so part of: LV780_RS21510
location: 9361..10302
location: region:9361-10302:1
so has part: feature:9361-10302:1:exon

WP_233864415.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:9361-10302:1:exon

LV780_RS21515
type: Gene
subclass of: SO_0000704
RO_0002162: 43057
locus tag: LV780_RS21515
old locus tag: LV780_21515
so part of: sequence
location: complement(10229..11875)
location: region:10229-11875:-1
so has part: feature:10229-11875:-1:exon
subclass of: SO_0000010

position:10229:-1
position: 10229
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:11875:-1
position: 11875
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:10229-11875:-1:exon

LV780_RS21515
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 43057
locus tag: LV780_RS21515
old locus tag: LV780_21515
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011908457.1
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: IS1634 family transposase
translation: MFIRITENGGRRYLQIMESYRNDAGKPRSRVIANLGRIDDRPDGHLDSLIRGLCKVTGRDAPEALRIEQEPGRAFGDVFALHELWKDLGFDRALARALRSGKRQLDVEALVRAMVFNRLCEPDSKLGCLRWLETVAMPAMPETVTHQHLLRAMDALMDHAERVEIELAKQIRPLVDRDLAVVFYDLTTVRIHGEAEIEDDLRAYGMNKEKGGIARQFVLGVVQTAEGLPLMHTVHPGNVAETKTLQAMLTTVLQRFPVERVVLVADRGLLSLDNIDTLTTLADQGGRKLEFILAVPARRYGELVETFRGLAFDKTGLSEARFAGHRLIVAHDPLRAAEQSEKRRARIAELEVMAERMVGKLNAQDAGQSDRGRRASDRGAYSRFTRAVAEAELTRFLRADFTADRFSWSLDETAIHEAELFDGKLALLTNAPDLTPAEAVARYKALADIERGFRVLKSDIEIAPVHHRLPDRIRAHALICFLALVLYRVMRMRLKAKGHTASPRTALDLLARIQRHRAKIGERTVNGLSVTTPQQMELFDTLNLPKPL
SIO_010081: LV780_RS21515
subclass of: SO_0000673
so part of: LV780_RS21515
location: complement(10229..11875)
location: region:10229-11875:-1
so has part: feature:10229-11875:-1:exon

WP_117344998.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:10229-11875:-1:exon

LV780_RS21520
type: Gene
subclass of: SO_0000704
RO_0002162: 43057
locus tag: LV780_RS21520
old locus tag: LV780_21520
so part of: sequence
location: 12014..12628
location: region:12014-12628:1
so has part: feature:12014-12628:1:exon
subclass of: SO_0000010

position:12014:1
position: 12014
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:12628:1
position: 12628
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:12014-12628:1:exon

LV780_RS21520
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 43057
locus tag: LV780_RS21520
old locus tag: LV780_21520
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MDFVELGLPAVLEKNGLRTGDRATFVSPGVETVTYAAKDPATGDEVAREGHRRRWDVQDIERAAHRAAAQAQPLAETATRQPQTGSPAMADKPREQDTRHDRLEDRIKRYEPGDTPVKGAASALARMDAEMRAAGVSEGDREAARGEASKLLAQSLRAGTPFQVQKLPNVTREEVREAGAARSDEAAGRAEARQREPVPKARER
SIO_010081: LV780_RS21520
subclass of: SO_0000673
so part of: LV780_RS21520
location: 12014..12628
location: region:12014-12628:1
so has part: feature:12014-12628:1:exon

WP_233864418.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:12014-12628:1:exon

LV780_RS21525
type: Gene
subclass of: SO_0000704
RO_0002162: 43057
locus tag: LV780_RS21525
old locus tag: LV780_21525
so part of: sequence
location: complement(12680..13213)
location: region:12680-13213:-1
so has part: feature:12680-13213:-1:exon
subclass of: SO_0000010

position:12680:-1
position: 12680
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:13213:-1
position: 13213
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:12680-13213:-1:exon

LV780_RS21525
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 43057
locus tag: LV780_RS21525
old locus tag: LV780_21525
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MSFDTRGRLKDAITPSLSRCRGVRGFEAVLPGRAGHPDLPLHFGARRIKGGELLVVASSHPASGERILWLYRKRWFIECLFADSKTRGLNLEDTRLTLARKLSLLVAITAIAVALLCHAAARLLGHRYPARKAHGYCAKSWFRTGLDEVRRRLRGSPETPIIAPDFVVPRRRRPRVV
SIO_010081: LV780_RS21525
subclass of: SO_0000673
so part of: LV780_RS21525
location: complement(12680..13213)
location: region:12680-13213:-1
so has part: feature:12680-13213:-1:exon

WP_117345305.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:12680-13213:-1:exon

LV780_RS21530
type: Gene
subclass of: SO_0000704
RO_0002162: 43057
locus tag: LV780_RS21530
old locus tag: LV780_21530
pseudo: true
so part of: sequence
location: <13167..>13391
location: region:13167-13391:1
so has part: feature:13167-13391:1:exon
subclass of: SO_0000010

position:13167:1
position: 13167
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

position:13391:1
position: 13391
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:13167-13391:1:exon

LV780_RS21530
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 43057
locus tag: LV780_RS21530
old locus tag: LV780_21530
inference: COORDINATES: similar to AA sequence:RefSeq:WP_076611202.1
GO process: GO:0015074 - DNA integration [Evidence IEA]
note: incomplete; partial in the middle of a contig; missing N-terminus and C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: integrase core domain-containing protein
SIO_010081: LV780_RS21530
subclass of: SO_0000673
so part of: LV780_RS21530
location: <13167..>13391
location: region:13167-13391:1
so has part: feature:13167-13391:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:13167-13391:1:exon

LV780_RS21535
type: Gene
subclass of: SO_0000704
RO_0002162: 43057
locus tag: LV780_RS21535
old locus tag: LV780_21535
so part of: sequence
location: complement(13706..15409)
location: region:13706-15409:-1
so has part: feature:13706-15409:-1:exon
subclass of: SO_0000010

position:13706:-1
position: 13706
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:15409:-1
position: 15409
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:13706-15409:-1:exon

LV780_RS21535
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 43057
locus tag: LV780_RS21535
old locus tag: LV780_21535
EC number: 3.2.2.-
inference: COORDINATES: similar to AA sequence:RefSeq:WP_008120567.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ADP-ribosylglycohydrolase family protein
translation: MNIRNEQAPANSYGLADYRRAVVNSALWAAAGDALGWMTELSRDASGVEHRTGSRNVFEPVPWKRLIGGRSGVTVDLPAGTYSDDTQLRLCVSRAIRANGSFDVEAFAKVEVTVWQGYCLGAGVGSKAAAMNLSKRGVNWFSNFFATDRQNYVTAGGNGAAMRIQPHVWSARGSIDELALRIMRDAVVTHGHPHGFCGALFHALCLWETLSKRAIPSIQRAEEYVSYCGHLPELIERDNELASFWRPTWEREAKESFDAAIRQFQEEALRDIAIAKNVINGKSSPDYHELLIKLGCLTDQYRGSGFKTAFAALLLSELYTPEGIEDALVRSANELDSDTDTIATMTGAILGALSSREPSWIVQDAEYLRAEALRMANIAQNQDASSFVYPDVATWEPPSTQSDSVVTWNSALALAGIGELRPRGGEYKSGASVWQWFELPFGQSILAKRRTKVTSAVGENQMPRSSPNQRTEQRQSPDRRQPDIFDHADRLVPSRQLDRREETRHQVRIERFPGLDRATDIIIASGFDDATIGRLINLAIDDTGGIEAAVALSAIIGKAQLARKRRR
SIO_010081: LV780_RS21535
subclass of: SO_0000673
so part of: LV780_RS21535
location: complement(13706..15409)
location: region:13706-15409:-1
so has part: feature:13706-15409:-1:exon

WP_233864432.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:13706-15409:-1:exon

LV780_RS21540
type: Gene
subclass of: SO_0000704
RO_0002162: 43057
locus tag: LV780_RS21540
old locus tag: LV780_21540
so part of: sequence
location: complement(15406..16083)
location: region:15406-16083:-1
so has part: feature:15406-16083:-1:exon
subclass of: SO_0000010

position:15406:-1
position: 15406
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:16083:-1
position: 16083
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:15406-16083:-1:exon

LV780_RS21540
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 43057
locus tag: LV780_RS21540
old locus tag: LV780_21540
inference: COORDINATES: protein motif:HMM:NF025840.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DarT ssDNA thymidine ADP-ribosyltransferase family protein
translation: MSLESSIQERGITEVLHFTTNRGLVGSLASQSLLSRSLLGQSAYLSHVLQLNSQNRPEESEFFDKTEDWLRFVNLSVSEINRRFFEFSLRWHTNDDVWWCILSFSPDIMTHDGVWFATTNNGYDGCERRQGEQGFDALFAPRIRRKARGANGQPWDVRRHGRSDNLPTCEQAEVLYPERVSLDYLNRVYVQNAEHQDTAVGWLSEFEYSDVAVSVLPLKFLGEKN
SIO_010081: LV780_RS21540
subclass of: SO_0000673
so part of: LV780_RS21540
location: complement(15406..16083)
location: region:15406-16083:-1
so has part: feature:15406-16083:-1:exon

WP_117345307.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:15406-16083:-1:exon

LV780_RS21545
type: Gene
subclass of: SO_0000704
RO_0002162: 43057
locus tag: LV780_RS21545
old locus tag: LV780_21545
so part of: sequence
location: complement(16080..17480)
location: region:16080-17480:-1
so has part: feature:16080-17480:-1:exon
subclass of: SO_0000010

position:16080:-1
position: 16080
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:17480:-1
position: 17480
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:16080-17480:-1:exon

LV780_RS21545
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 43057
locus tag: LV780_RS21545
old locus tag: LV780_21545
inference: COORDINATES: similar to AA sequence:RefSeq:WP_008120569.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 3'-5' exonuclease
translation: MKHLGRIVPSAEQLKLISANQTGAELIRGSAGSGKTTTALLRLKSLAGMMRARKERTGDDAPVKFLLLTFNRTLAGYVRALAESQISGPNQEIEIRTFAKWAMTKLGVGAVNADSANAFLRELANRFAGLDQSYVVHEAEYLMGRFESHDYESYIATERAGRGALPRVDAALRRRILDEVIYPYRKKLGDEGWLDWNSLALKMRSDLPSIGYDIIIVDESQDFSANEIRAIKHHLADDHAITFVIDTAQRIYARGFTWAEAGIDVTGNRSHRLRENHRNTREIAAFASSILTGIPVDPDGALPNLAAAQSQGPLPKVISGNYSRQIEWVIDYITEAVDLTTETVAFLKPEGGRWFDTVRHELRRAGMKYVEMQRNGKWPDGDENIALSTFHSAKGLEFDHVIIIGFNQENTPFGDEEITDQIQVLRRLLAVAVARARKQVIVGYKPGEESRLTDYFDAGTYEEVHL
SIO_010081: LV780_RS21545
subclass of: SO_0000673
so part of: LV780_RS21545
location: complement(16080..17480)
location: region:16080-17480:-1
so has part: feature:16080-17480:-1:exon

WP_233864434.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:16080-17480:-1:exon

LV780_RS21550
type: Gene
subclass of: SO_0000704
RO_0002162: 43057
locus tag: LV780_RS21550
old locus tag: LV780_21550
so part of: sequence
location: complement(17707..18909)
location: region:17707-18909:-1
so has part: feature:17707-18909:-1:exon
subclass of: SO_0000010

position:17707:-1
position: 17707
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:18909:-1
position: 18909
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:17707-18909:-1:exon

LV780_RS21550
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 43057
locus tag: LV780_RS21550
old locus tag: LV780_21550
inference: COORDINATES: similar to AA sequence:RefSeq:WP_007792467.1
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: IS256 family transposase
translation: MTKPMMDLRALVEKSADADLLREMIGFAAERLMELEVGARTGADYGEKSSERLAQRNGYRDRDWQTRAGSVELRIPRLRTGSYFPSFLEPRRSVEKALTAVIQEAYVQGVSTRAMDDLVQAMGGTGISRSQVSRLCEEIDERVDAFLTRPIEGEWPYLWIDATYLKVRQGGRIVSVAVTIAVGVNTDGRREVLGMAIGASEAEPFWTEFLRDLVRRGLSGVKLVISDAHEGIKAATARVLSTSWQRCRVHFQRNALAHAGKNSRRVVSAFIATAFAQPDHAAAKAQWRLVADQMRPKLPKLATLMDTAEEDVLAYMTFPAQHRAKLHSTNPIERLNGEIKRRTDVVGIFPNEASIRRLVGAILMEQTEEWTVQRGRYLTLETLAPVCDDLTVSLPAAQRD
SIO_010081: LV780_RS21550
subclass of: SO_0000673
so part of: LV780_RS21550
location: complement(17707..18909)
location: region:17707-18909:-1
so has part: feature:17707-18909:-1:exon

WP_117345032.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:17707-18909:-1:exon

LV780_RS21555
type: Gene
subclass of: SO_0000704
RO_0002162: 43057
locus tag: LV780_RS21555
old locus tag: LV780_21555
so part of: sequence
location: complement(19502..22390)
location: region:19502-22390:-1
so has part: feature:19502-22390:-1:exon
subclass of: SO_0000010

position:19502:-1
position: 19502
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:22390:-1
position: 22390
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:19502-22390:-1:exon

LV780_RS21555
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 43057
locus tag: LV780_RS21555
old locus tag: LV780_21555
inference: COORDINATES: protein motif:HMM:NF012492.2
GO function: GO:0005524 - ATP binding [Evidence IEA]; GO:0003676 - nucleic acid binding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DEAD/DEAH box helicase
translation: MKTTLPTGCKLSQRVLETAELMPRDGENYSITDAQYAALDAGLADGKSLLISAPTSTGKTLIGWWAAATGLEHGKKFVYLVSHRALASQKFDEIQKLFRGPWLGDDPHTLVCATGDGVTDGSGRANSAPLSATILVATYEKYLALISAGGPPQDLSNVVFVCDEIQLIGDGSRGKHVELLLSVLKRTGWYQFIGLSAVMDDVGAQQFAHWLDLSLVKVETREKSLTIEGRWRNGRLIARSTPDGIEPLRQLPSVKRMELNGMVQELIALDKKPVIVFCMKVDDCYELAAKWAATQAVTQSVEAPAGLDLDSGLLQLINKRCAFHNAELSEAERSFVEDLMEAKTVDVVFATSTLAAGVNFPLGSAVFSKWKRWDFDKREHVPIRRDEFQNMAGRVGRMGQGTDEGIVLATAGGASDLALLQQLMDFSKRETLGVGITPADFGSLVIQLFAGGLCTTRNEAFTLMAATLSASREAERGVGNVEHWRRHLDQQIDRLIETHCLIETKTRLVVTEFGKAVARSGLKPETVEHFLHYLSEHGEQAAKLLPTPGQEGRDDDLLFIFAHGSLLSPEFTLTGGPRTRNVSYRFSRYGAIANPRAEALEDLLFERPWIADPGAANGARALSEWAAGADRETLEQLVPDVRLGLIESLARDVSWLLAAVSEVIGSSSSPTLADAARHPLLRSTNPTLPHIRKFSRVLRRYAVRIGLGLPSECHWLKELELRGPAKRLTRMQIVSLHQQGISRPHLLMDGSPAMDALREAALPKVGGIAYANQVRDAARNWKVDQRRHFRGRHEKKAVRHSVENIVSDLYDMRGKDLEAAVIAAFEDLGINCTVLDDGTKPAWPDLKIEFSASGMASDIVAEVKSKERETALVSLNDAIEVISAAAIAGLSGTPVATICSPGVEPSVPTAISGCNHLSVVELVDLAEAYLRIKDGNLTIAELHNWLTTPGIAITEDLPFNNS
SIO_010081: LV780_RS21555
subclass of: SO_0000673
so part of: LV780_RS21555
location: complement(19502..22390)
location: region:19502-22390:-1
so has part: feature:19502-22390:-1:exon

WP_117345308.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:19502-22390:-1:exon

LV780_RS21560
type: Gene
subclass of: SO_0000704
RO_0002162: 43057
locus tag: LV780_RS21560
old locus tag: LV780_21560
pseudo: true
so part of: sequence
location: complement(22795..>23142)
location: region:22795-23142:-1
so has part: feature:22795-23142:-1:exon
subclass of: SO_0000010

position:22795:-1
position: 22795
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:23142:-1
position: 23142
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:22795-23142:-1:exon

LV780_RS21560
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 43057
locus tag: LV780_RS21560
old locus tag: LV780_21560
inference: COORDINATES: similar to AA sequence:RefSeq:WP_076611976.1
note: incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: transposase
SIO_010081: LV780_RS21560
subclass of: SO_0000673
so part of: LV780_RS21560
location: complement(22795..>23142)
location: region:22795-23142:-1
so has part: feature:22795-23142:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:22795-23142:-1:exon

LV780_RS21565
type: Gene
subclass of: SO_0000704
RO_0002162: 43057
locus tag: LV780_RS21565
old locus tag: LV780_21565
so part of: sequence
location: complement(23255..24451)
location: region:23255-24451:-1
so has part: feature:23255-24451:-1:exon
subclass of: SO_0000010

position:23255:-1
position: 23255
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:24451:-1
position: 24451
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:23255-24451:-1:exon

LV780_RS21565
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 43057
locus tag: LV780_RS21565
old locus tag: LV780_21565
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011911215.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: relaxase/mobilization nuclease domain-containing protein
translation: MSDFETPIGFEDCWPSYRSSRKAKAGASGGSGLSRAGGRREGEEGRNPPTDPASGPKRPALSPEDKARLARVVRRAPEVVVKVSVPAKHDKQGNPIHVNRSTEAVRVAAHLSYISRNGKLELENDRGEVASGRAAAAAVFREWMDKHDEDRANGMATDRTRITTSMVFSMPGEVSPEIVRDAVRALAEQEFRGRHDYVMALHTDTHHPHVHLTVRTVGHDGAKLALRKADLQHLRDVFSQELRQRGVEAESTPRHARGIARRGEATPAYKIRQRGGNPLADARIRREVDAELAQNAGRLRDRPWDEAILQRRGRVMAAYAAAAAALAQSPDAGDQALARETQRFATRLTDTSTRRMAVALSLKLRVRSHTQDGGREAPIKGDDARRSRSHDKQPGRER
SIO_010081: LV780_RS21565
subclass of: SO_0000673
so part of: LV780_RS21565
location: complement(23255..24451)
location: region:23255-24451:-1
so has part: feature:23255-24451:-1:exon

WP_117345335.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:23255-24451:-1:exon

LV780_RS21570
type: Gene
subclass of: SO_0000704
RO_0002162: 43057
gene: mobC
locus tag: LV780_RS21570
old locus tag: LV780_21570
so part of: sequence
location: complement(24444..24998)
location: region:24444-24998:-1
so has part: feature:24444-24998:-1:exon
subclass of: SO_0000010

position:24444:-1
position: 24444
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:24998:-1
position: 24998
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:24444-24998:-1:exon

LV780_RS21570
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 43057
gene: mobC
locus tag: LV780_RS21570
old locus tag: LV780_21570
inference: COORDINATES: similar to AA sequence:RefSeq:WP_007803547.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: plasmid mobilization relaxosome protein MobC
translation: MTEKSVVVHARVPPEIRARLEGLAAEAGVHVSGVLRALIEDAVRDTSTQKAPPLLSRARREGKVTVRLAADVRDVLEREAKGQGVSLSTWAAAVIGARARHAPQPVLSERRTIQAAFRQLRGLAVNVNQIAYALNRGVLTGAGAEFTREEVRALRQDVCALRDVLRAYAAGRLSFQAPRGGGDE
SIO_010081: LV780_RS21570
subclass of: SO_0000673
so part of: LV780_RS21570
location: complement(24444..24998)
location: region:24444-24998:-1
so has part: feature:24444-24998:-1:exon

WP_117345336.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:24444-24998:-1:exon

LV780_RS21575
type: Gene
subclass of: SO_0000704
RO_0002162: 43057
locus tag: LV780_RS21575
old locus tag: LV780_21575
so part of: sequence
location: complement(25230..25517)
location: region:25230-25517:-1
so has part: feature:25230-25517:-1:exon
subclass of: SO_0000010

position:25230:-1
position: 25230
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:25517:-1
position: 25517
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:25230-25517:-1:exon

LV780_RS21575
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 43057
locus tag: LV780_RS21575
old locus tag: LV780_21575
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MLRAAFWNAMVLVRAPVQLGLKVVMLIHLIGALGGVVVLFTGTGLPALDSAPLIFRLLASLYMLGVYILASWASLRLDRAVEQGAPGKRRIFLPL
SIO_010081: LV780_RS21575
subclass of: SO_0000673
so part of: LV780_RS21575
location: complement(25230..25517)
location: region:25230-25517:-1
so has part: feature:25230-25517:-1:exon

WP_117345309.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:25230-25517:-1:exon

LV780_RS21580
type: Gene
subclass of: SO_0000704
RO_0002162: 43057
locus tag: LV780_RS21580
old locus tag: LV780_21580
so part of: sequence
location: complement(25533..26543)
location: region:25533-26543:-1
so has part: feature:25533-26543:-1:exon
subclass of: SO_0000010

position:25533:-1
position: 25533
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:26543:-1
position: 26543
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:25533-26543:-1:exon

LV780_RS21580
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 43057
locus tag: LV780_RS21580
old locus tag: LV780_21580
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011911244.1
GO function: GO:0003677 - DNA binding [Evidence IEA]
GO process: GO:0007059 - chromosome segregation [Evidence IEA]; GO:0000910 - cytokinesis [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ParB/RepB/Spo0J family partition protein
translation: MDLKKKITSTTATLERLKQSGQLDALKRPKPQPSGTQEIAIDQIVPDPDQPRRSFDQDKLKSLAESIRAQGVLQAITVQPADEAGKHVIIMGERRFQAAKLAGLAKIPAVVREATLEIRLAQLTENVQRDDLTTLEIAQAVAAMRDAGQSREDIAKALGWSEGSVSRFASISKMPEELQQLAAQNVPVRAVADLFALWKKDEGAVAAFLASTSPESVSRSTVEALRDAIDGKGQPAGGPNDVAPAEADVPASDLAPSAAEDQGEAPAADAEPASGRAKARPGRGVVIVCKVGDAVGRLDLETVPSQPKCVVVRFDAGERVDEVPLSEIELVDVIPL
SIO_010081: LV780_RS21580
subclass of: SO_0000673
so part of: LV780_RS21580
location: complement(25533..26543)
location: region:25533-26543:-1
so has part: feature:25533-26543:-1:exon

WP_117345310.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:25533-26543:-1:exon

LV780_RS21585
type: Gene
subclass of: SO_0000704
RO_0002162: 43057
locus tag: LV780_RS21585
old locus tag: LV780_21585
so part of: sequence
location: complement(26546..27286)
location: region:26546-27286:-1
so has part: feature:26546-27286:-1:exon
subclass of: SO_0000010

position:26546:-1
position: 26546
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:27286:-1
position: 27286
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:26546-27286:-1:exon

LV780_RS21585
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 43057
locus tag: LV780_RS21585
old locus tag: LV780_21585
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011911243.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ParA family protein
translation: MKKIVVVNNKGGVGKTTVASQLAFHLAEAGHSVIAVDLDGQKNLTSVMHGQRIGGQTLHMIETGDAPSIKVQSGEIVLVESSDELPVSTDDAILQRSAQAIAGLDGADFCIIDTPPTFSATVYGALLSADFMISPIELKKFSLDGIEAVLKAFVQVQEINEHIQFLGLLPSRFDAVKQSERETLQMVAESYANLIIPHAIRNRIAYESASAEGMHVKEVTTASGKEAAAEFKAFFQWFMTAIGEGN
SIO_010081: LV780_RS21585
subclass of: SO_0000673
so part of: LV780_RS21585
location: complement(26546..27286)
location: region:26546-27286:-1
so has part: feature:26546-27286:-1:exon

WP_117345311.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:26546-27286:-1:exon

LV780_RS21590
type: Gene
subclass of: SO_0000704
RO_0002162: 43057
locus tag: LV780_RS21590
old locus tag: LV780_21590
so part of: sequence
location: complement(27258..27581)
location: region:27258-27581:-1
so has part: feature:27258-27581:-1:exon
subclass of: SO_0000010

position:27258:-1
position: 27258
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:27581:-1
position: 27581
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:27258-27581:-1:exon

LV780_RS21590
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 43057
locus tag: LV780_RS21590
old locus tag: LV780_21590
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MYQLLYVNMYVYNGSVTRGVATRAASASLLASMALGLSAERETCMASTPTRLFSMNMPVPLHRALKRAAVEREKSMGEIVVEALKQWGLEPLEEEDSGSEEDRSRQQ
SIO_010081: LV780_RS21590
subclass of: SO_0000673
so part of: LV780_RS21590
location: complement(27258..27581)
location: region:27258-27581:-1
so has part: feature:27258-27581:-1:exon

WP_147326432.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:27258-27581:-1:exon

LV780_RS21595
type: Gene
subclass of: SO_0000704
RO_0002162: 43057
locus tag: LV780_RS21595
old locus tag: LV780_21595
so part of: sequence
location: complement(27748..29211)
location: region:27748-29211:-1
so has part: feature:27748-29211:-1:exon
subclass of: SO_0000010

position:27748:-1
position: 27748
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:29211:-1
position: 29211
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:27748-29211:-1:exon

LV780_RS21595
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 43057
locus tag: LV780_RS21595
old locus tag: LV780_21595
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011331420.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF4942 domain-containing protein
translation: MSRIDRIELETMEEAGAQGTGLVSMNFIERIADARSAALQAFETVGQQLQAAFAAAREAGKIAGVAHGGHGYHRGSQKEKEAIDLFGADFDAARSLTALRRDLDARIWTRLLEETGLRTMMDRKERDDFDRSLSGDEVPEATLENISATFERLCGEADLIFLRGLARAFSSLDRRFKSHDGFKIGSRVILDGLMSADFGSWSYRSEREGVFADIERIFAILDGRQPAPGALRRAIEDDPPGWGPRQSETLTRYFKFRIFKNGNAHLWFQVPELVEAVNRKLAEYYGAALADAAPADASPDIFRNRSSLPARDLAFYPTPAEVAAQVLGVADVRPGMKVLEPSAGIGGLVWSVVERGALVDAIEIHPDRAAAIEGRRHPSVTVRCANFLALTPCEDYDLVLMNPPFAGTHWMDHVMQAWAFLKPGGQLVAILPASAEVNETAKHERFRAWARKVNANRYGSLFSDLPAESFRPVGVNINTVILKMRKG
SIO_010081: LV780_RS21595
subclass of: SO_0000673
so part of: LV780_RS21595
location: complement(27748..29211)
location: region:27748-29211:-1
so has part: feature:27748-29211:-1:exon

WP_233864357.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:27748-29211:-1:exon

LV780_RS21600
type: Gene
subclass of: SO_0000704
RO_0002162: 43057
locus tag: LV780_RS21600
old locus tag: LV780_21600
so part of: sequence
location: complement(29639..30502)
location: region:29639-30502:-1
so has part: feature:29639-30502:-1:exon
subclass of: SO_0000010

position:29639:-1
position: 29639
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:30502:-1
position: 30502
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:29639-30502:-1:exon

LV780_RS21600
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 43057
locus tag: LV780_RS21600
old locus tag: LV780_21600
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011836229.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF932 domain-containing protein
translation: MGYHHYMRGMSNGGSIFSRGEPLTNAELHARVPSIFATEAHESRSARFAPVPTITVLDGLRAEGFEPFFAQQARTRTEGKAEFTKHMLRLRHRGIVNEAGEAFEIVLVNANDGTSAYQMIPGFFRFVCANGLMAGETFEEVKVRHSGNAIGEVIEGAYRVLENAPRVADQVQRFKSIRLQDREREILAEAAHSLRFPATVEGKAAPIDPPALLRPRRSEDRATDLWTAFNVVQENTLRGGMRGRIQTGSGFIRRQTVREVTGIDQSRALNRALWMLTERMAELKSAA
SIO_010081: LV780_RS21600
subclass of: SO_0000673
so part of: LV780_RS21600
location: complement(29639..30502)
location: region:29639-30502:-1
so has part: feature:29639-30502:-1:exon

WP_117345312.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:29639-30502:-1:exon

LV780_RS21605
type: Gene
subclass of: SO_0000704
RO_0002162: 43057
locus tag: LV780_RS21605
old locus tag: LV780_21605
so part of: sequence
location: 31140..32237
location: region:31140-32237:1
so has part: feature:31140-32237:1:exon
subclass of: SO_0000010

position:31140:1
position: 31140
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:32237:1
position: 32237
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:31140-32237:1:exon

LV780_RS21605
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 43057
locus tag: LV780_RS21605
old locus tag: LV780_21605
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015740139.1
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ISAs1 family transposase
translation: MQIFLSAFDDIPDPRADNARHDLGELLVVAFVAVLCGATSCAEMAAFGRAKERVFRDFLELRHAIPSHDTFSAVFRMLDPKALDAAFGRVLAEIVGLLGEGDVIAIDGKVMRGSRDRAEGGRTRMMVSAYASRLRLTLASVPAENGGELEAALEVLGLIALKGKVVTADALHCNRRTVAEINARGGDWCLSLKANQDSLLSDARSCFGRLAPDHLTARQEETGHGRRETRTATVVSAKGLAEHHDFPRLKAFGRIEATRESDGKVQSETRWFALSWMPAPEVLLATVRAHWAIENALHWQLDVSFREDAARNRKDNGPDNIAVLGRRALDVARRDGSKSSLSIKLKRAGWDDDFLLRLLKQLPAG
SIO_010081: LV780_RS21605
subclass of: SO_0000673
so part of: LV780_RS21605
location: 31140..32237
location: region:31140-32237:1
so has part: feature:31140-32237:1:exon

WP_117345313.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:31140-32237:1:exon

LV780_RS21610
type: Gene
subclass of: SO_0000704
RO_0002162: 43057
locus tag: LV780_RS21610
old locus tag: LV780_21610
so part of: sequence
location: 32403..32726
location: region:32403-32726:1
so has part: feature:32403-32726:1:exon
subclass of: SO_0000010

position:32403:1
position: 32403
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:32726:1
position: 32726
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:32403-32726:1:exon

LV780_RS21610
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 43057
locus tag: LV780_RS21610
old locus tag: LV780_21610
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011911241.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: H-NS histone family protein
translation: MPDIDLDSLSLKELKALQAQVVRAIATYEDRRKKDALSELEEKARELGFTLAELTGITVPRKRAPAEAKYANPANPADTWSGRGRKPRWFEEAMKVGKSADDLRVQL
SIO_010081: LV780_RS21610
subclass of: SO_0000673
so part of: LV780_RS21610
location: 32403..32726
location: region:32403-32726:1
so has part: feature:32403-32726:1:exon

WP_117345314.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:32403-32726:1:exon

LV780_RS21615
type: Gene
subclass of: SO_0000704
RO_0002162: 43057
locus tag: LV780_RS21615
old locus tag: LV780_21615
so part of: sequence
location: 33419..33619
location: region:33419-33619:1
so has part: feature:33419-33619:1:exon
subclass of: SO_0000010

position:33419:1
position: 33419
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:33619:1
position: 33619
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:33419-33619:1:exon

LV780_RS21615
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 43057
locus tag: LV780_RS21615
old locus tag: LV780_21615
inference: COORDINATES: protein motif:HMM:NF013561.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ribbon-helix-helix domain-containing protein
translation: MTSKHRVSVNLSPDEHRELDALAKGARISKAWLGRQAITEFLDRHRGRKMQHPLDLSSTRTTRRPE
SIO_010081: LV780_RS21615
subclass of: SO_0000673
so part of: LV780_RS21615
location: 33419..33619
location: region:33419-33619:1
so has part: feature:33419-33619:1:exon

WP_233864360.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:33419-33619:1:exon

LV780_RS21620
type: Gene
subclass of: SO_0000704
RO_0002162: 43057
locus tag: LV780_RS21620
old locus tag: LV780_21620
so part of: sequence
location: 33616..35427
location: region:33616-35427:1
so has part: feature:33616-35427:1:exon
subclass of: SO_0000010

position:33616:1
position: 33616
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:35427:1
position: 35427
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:33616-35427:1:exon

LV780_RS21620
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 43057
locus tag: LV780_RS21620
old locus tag: LV780_21620
inference: COORDINATES: similar to AA sequence:RefSeq:WP_020304263.1
GO function: GO:0003677 - DNA binding [Evidence IEA]; GO:0008170 - N-methyltransferase activity [Evidence IEA]
GO process: GO:0006306 - DNA methylation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: N-6 DNA methylase
translation: MIRDALTKRRSSSPPTSEPPPLETLESGRVMARALAESTTAPERLALARAFGVALMSAWWSALTAAESTSVRLRPPLQDFDTAELPDSAAALAASLGKAAAQLDPESAAYQIGLTYTCTLPRTHRAELGIYYTPPCLTARLIAQATASGVNWATCRVLDPACGGGAFLAPVARQIVEELQDCSPRILVENIANRLRGYEIDPFGAWLSQVTLDAVLLPITQASGRQLPVIVTVCDSLQKNPPRDRFDLVIGNPPYGRVRLDPVTRERFKRSLFGHANLYGLFTDLALRHVRPGGVVAYVTPTSFLAGEYFKNLRTLLGRAAPPATFDFVSVRKGVFDDVLQETLLATYRHGSDPAAATVHEITPVDGSGLSIEDAGSFTLPDDPASPWILPRCAQQGPLVATLSRMTHRLADWGYTVSTGPLVWNRYKDQLVTRSGRKCYPLIWAEAITSDGCFIWRAEKKNHAPWFQTRPGDDWLVTSSLCVLLQRTTAKEQSRRLIAAALPAEFMETHGAVVIENHLNMLRPLPDRPAVPAATLAAFLNSAAADRAFRCVSGSVAVSAYELKALPLPAPEDLRDLTQLIAQKAGRAKIEAACAQLYEDGAA
SIO_010081: LV780_RS21620
subclass of: SO_0000673
so part of: LV780_RS21620
location: 33616..35427
location: region:33616-35427:1
so has part: feature:33616-35427:1:exon

WP_233864374.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:33616-35427:1:exon

LV780_RS21625
type: Gene
subclass of: SO_0000704
RO_0002162: 43057
locus tag: LV780_RS21625
old locus tag: LV780_21625
so part of: sequence
location: 35431..36516
location: region:35431-36516:1
so has part: feature:35431-36516:1:exon
subclass of: SO_0000010

position:35431:1
position: 35431
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:36516:1
position: 36516
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:35431-36516:1:exon

LV780_RS21625
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 43057
locus tag: LV780_RS21625
old locus tag: LV780_21625
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011390240.1
GO function: GO:0003677 - DNA binding [Evidence IEA]; GO:0000287 - magnesium ion binding [Evidence IEA]; GO:0009036 - type II site-specific deoxyribonuclease activity [Evidence IEA]
GO process: GO:0009307 - DNA restriction-modification system [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: BsuBI/PstI family type II restriction endonuclease
translation: MADLPPYVARDLVSERLALIFPEGTPNRTYCVRELAASTVFAMLYIGAVEGSGRYLGPVHVYRMTAEQAAKAENVARLQYASAVLKKKYAPEGSRWYADNTREPIRDETLREGLVAIGAVFARTDLPTTSGNPRYALKLDFATLFDPALDGDQLEAAIGAFQKKHLSKSALARVSIMRAGAAAGASGVLVTFPNNETRQLAPGPSSIITRAVIEVFAPNFLEDAAVLWLSESGNKVVARDDKLAAGIGLKIEADKNLPDIILADLGPAEPLIVFVEVVATDGAVTARRQKALFALTDEAGFARDQVAFLTAYQDRESAGFRKTASGLAWGSFAWFVSEPDKIVILRDGAASPARLADLLAQ
SIO_010081: LV780_RS21625
subclass of: SO_0000673
so part of: LV780_RS21625
location: 35431..36516
location: region:35431-36516:1
so has part: feature:35431-36516:1:exon

WP_117345317.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:35431-36516:1:exon

LV780_RS21630
type: Gene
subclass of: SO_0000704
RO_0002162: 43057
locus tag: LV780_RS21630
old locus tag: LV780_21630
pseudo: true
so part of: sequence
location: <36539..36970
location: region:36539-36970:1
so has part: feature:36539-36970:1:exon
subclass of: SO_0000010

position:36539:1
position: 36539
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

position:36970:1
position: 36970
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:36539-36970:1:exon

LV780_RS21630
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 43057
locus tag: LV780_RS21630
old locus tag: LV780_21630
inference: COORDINATES: similar to AA sequence:RefSeq:WP_018859047.1
GO component: GO:0016020 - membrane [Evidence IEA]
note: incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: TSUP family transporter
SIO_010081: LV780_RS21630
subclass of: SO_0000673
so part of: LV780_RS21630
location: <36539..36970
location: region:36539-36970:1
so has part: feature:36539-36970:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:36539-36970:1:exon

LV780_RS21635
type: Gene
subclass of: SO_0000704
RO_0002162: 43057
gene: modD
locus tag: LV780_RS21635
old locus tag: LV780_21635
so part of: sequence
location: 37060..37902
location: region:37060-37902:1
so has part: feature:37060-37902:1:exon
subclass of: SO_0000010

position:37060:1
position: 37060
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:37902:1
position: 37902
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:37060-37902:1:exon

LV780_RS21635
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 43057
gene: modD
locus tag: LV780_RS21635
old locus tag: LV780_21635
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011911173.1
GO function: GO:0004514 - nicotinate-nucleotide diphosphorylase (carboxylating) activity [Evidence IEA]
GO process: GO:0009435 - NAD biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ModD protein
translation: MFLIDDQALLALIREDVPFGDLTTRSLGFGLTRGHLVMTARDPMTLCAVEEAARIFELLGCAADLAAASGEARQSGDMILAAAGSAEALFTGWKVAQVLVEWAAGLASAARELVDAANAARPGVVVACTRKSVPGTRALALKAVTAGGAIIHRAGLSDTVLLFPEHRAFAPGCLKGQLMRLRLACPERHIVVEVTHHDEALRAAEWGADVVQLEKFAPAAVARVVAELSGSPVRVAAAGGINAANAADYAATGADVLVTSQPYYARPRDVAVTLEGVSTA
SIO_010081: LV780_RS21635
subclass of: SO_0000673
so part of: LV780_RS21635
location: 37060..37902
location: region:37060-37902:1
so has part: feature:37060-37902:1:exon

WP_117345319.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:37060-37902:1:exon

LV780_RS21640
type: Gene
subclass of: SO_0000704
RO_0002162: 43057
locus tag: LV780_RS21640
old locus tag: LV780_21640
so part of: sequence
location: 38088..38918
location: region:38088-38918:1
so has part: feature:38088-38918:1:exon
subclass of: SO_0000010

position:38088:1
position: 38088
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:38918:1
position: 38918
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:38088-38918:1:exon

LV780_RS21640
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 43057
locus tag: LV780_RS21640
old locus tag: LV780_21640
inference: COORDINATES: protein motif:HMM:NF033564.0
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ISAs1 family transposase
translation: MPSHDTFSAVFRMLDPKALDAAFGRVLAEIVGLLGEGDVIAIDGKVMRGSRDRAEGGRTRMMVSAYASRLRLTLASVPAENGGELEAALEVLGLIALKGKVVTADALHCNRRTVAEINARGGDWCLSLKANQDSLLSDARSCFGRLAPDHLTARQEETGHGRRETRTATVVSAKGLAEHHDFPRLKAFGRIEATRESDGKVQSETRWFALSWMPAPEVLLATVRAHWAIENALHWQLDVSFREDAARNRKDNGPDNIAVLGRRALDVARRDGSDEC
SIO_010081: LV780_RS21640
subclass of: SO_0000673
so part of: LV780_RS21640
location: 38088..38918
location: region:38088-38918:1
so has part: feature:38088-38918:1:exon

WP_233864436.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:38088-38918:1:exon

LV780_RS21645
type: Gene
subclass of: SO_0000704
RO_0002162: 43057
locus tag: LV780_RS21645
old locus tag: LV780_21645
so part of: sequence
location: complement(38969..41854)
location: region:38969-41854:-1
so has part: feature:38969-41854:-1:exon
subclass of: SO_0000010

position:38969:-1
position: 38969
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:41854:-1
position: 41854
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:38969-41854:-1:exon

LV780_RS21645
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 43057
locus tag: LV780_RS21645
old locus tag: LV780_21645
inference: COORDINATES: similar to AA sequence:RefSeq:WP_076612398.1
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: Tn3 family transposase
translation: MARRSVLTDRQRSAVWALPTDAPTFLRHYTLADDDLDHIRSRRRSHNRFGFALQLCALRYPGRLLAPGEIIPEAISRFIGAQLGLSPDALIGYAIRAETRREHLGELRAIYGYRMFSGRGARDLKIWLDGQAELARTNEDLVRRFVEECRRTQTILPGLTVIERLCADALVAAEHRIDARIAARLDARMRERLASLLEEAVERVSRFVWLRQFEVGKNSADMNRLLDRLEFLQGLGLSADVLKEVPPHRIARLRRLGERYFTDDLRDVSGDRRLAILATCAVEWQAGLADAIVETHDRIVGRTWRDAKARCDVRIADAQAALQETLRTFSDLGAALLEAHGDDAPLDGAVASSCGWEKLQGLVAAASSLTDTMAADPLAHVVQGYLRFRRYAPRMIRALDIRAAQVAEPLLAAAKMIVQDAPAGPRPTTFLRRSSRWHRHLQRQEAGDHRLWQVAVLFQLRDAFRSGDIWLAHSRRYADLKEVLVPIAAAQATARLAVPFDPADWLADRKARMAQALKRLASAAKAGAMPGGSIEDGTLKIERLTAAVPPEADELVLDLYRRLPEVRITDVLLEVDAATGFTDAFTHLRTGAPCADRIGLLNVLLAEGLNLGLSKMAEATDSHDYFQLSRLSRWHVESAAMNRALAMVIEAQATLPMARFWGAGFTASSDGQFFPAARQGEAMNLVNAKYGSEPGVKAYTHVSDQFGPFATQTIPATVNEAPYILDGLLMNEQGRRVRENFADTGGFTDHVFAITAALGFRFVPRIRDLPSKRLYVFDPASVPKELKGLIGGKVREGTITSNWPDILRSAATMVAGVLPPSQLLRKFAAYPRQHDLAVALREIGRVERTLFIIEWLLDADLQRRAQIGLNKGEAHHSLKNALRIGRQGEIRDRTAEGQHYRMAGLNLLAAIIIYWNTAHLGRAVVERQNAGLACPPELLAHTSPLGWAHILLTGEYRWPKQ
SIO_010081: LV780_RS21645
subclass of: SO_0000673
so part of: LV780_RS21645
location: complement(38969..41854)
location: region:38969-41854:-1
so has part: feature:38969-41854:-1:exon

WP_117345320.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:38969-41854:-1:exon

LV780_RS21650
type: Gene
subclass of: SO_0000704
RO_0002162: 43057
locus tag: LV780_RS21650
old locus tag: LV780_21650
so part of: sequence
location: complement(41940..42374)
location: region:41940-42374:-1
so has part: feature:41940-42374:-1:exon
subclass of: SO_0000010

position:41940:-1
position: 41940
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:42374:-1
position: 42374
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:41940-42374:-1:exon

LV780_RS21650
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 43057
locus tag: LV780_RS21650
old locus tag: LV780_21650
inference: COORDINATES: similar to AA sequence:RefSeq:WP_005221592.1
GO function: GO:0003700 - DNA-binding transcription factor activity [Evidence IEA]
GO process: GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: MarR family transcriptional regulator
translation: MPFDREASAGYLANHMARLFARHLEARLKPHGLALGAFPALLHLWEQDGLTQRDLVERLGIEQPTMAATLTRMERDGLITRHRDEGDGRMQRVRLTERARGLRDAAVTEAGDVNAVATRMLTAEEKQQFITLLRKVIEALEQDR
SIO_010081: LV780_RS21650
subclass of: SO_0000673
so part of: LV780_RS21650
location: complement(41940..42374)
location: region:41940-42374:-1
so has part: feature:41940-42374:-1:exon

WP_117345321.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:41940-42374:-1:exon

LV780_RS21655
type: Gene
subclass of: SO_0000704
RO_0002162: 43057
locus tag: LV780_RS21655
old locus tag: LV780_21655
so part of: sequence
location: 42442..42888
location: region:42442-42888:1
so has part: feature:42442-42888:1:exon
subclass of: SO_0000010

position:42442:1
position: 42442
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:42888:1
position: 42888
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:42442-42888:1:exon

LV780_RS21655
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 43057
locus tag: LV780_RS21655
old locus tag: LV780_21655
inference: COORDINATES: similar to AA sequence:RefSeq:WP_016446722.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MIPRLHKAAGLLAILTIATFWLSTAATELLLGKDAVTTVKVLIPWGFLILVPAMITAGATGMKLAKGRTGGILGAKRKRMPFIAANGLLVLIPAALFLAAKARAGEFDGTFQAVQTVELVVGALNILMMARNIRDGRTMTAGRRLKAA
SIO_010081: LV780_RS21655
subclass of: SO_0000673
so part of: LV780_RS21655
location: 42442..42888
location: region:42442-42888:1
so has part: feature:42442-42888:1:exon

WP_117345322.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:42442-42888:1:exon

LV780_RS21660
type: Gene
subclass of: SO_0000704
RO_0002162: 43057
locus tag: LV780_RS21660
old locus tag: LV780_21660
so part of: sequence
location: 43051..43638
location: region:43051-43638:1
so has part: feature:43051-43638:1:exon
subclass of: SO_0000010

position:43051:1
position: 43051
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:43638:1
position: 43638
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:43051-43638:1:exon

LV780_RS21660
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 43057
locus tag: LV780_RS21660
old locus tag: LV780_21660
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013573044.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: recombinase family protein
translation: MTRTLIGYARCSTDKQDLEAQRQALAALGVAEDRIYTDHGMTGTNRTRPGLDQALAAVREGDTLVVSKLDRLARSVPDARAIADQLAAKGVRLALGAVVHDPTDPMGKMFFNILATFAEFEADLIRARTREGMAIARARGKLRGKQPKLSEKQQKELRRMHGSGDYSISDLAELFSVSRPTVYRTLNRASRPVGH
SIO_010081: LV780_RS21660
subclass of: SO_0000673
so part of: LV780_RS21660
location: 43051..43638
location: region:43051-43638:1
so has part: feature:43051-43638:1:exon

WP_117345301.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:43051-43638:1:exon

LV780_RS21665
type: Gene
subclass of: SO_0000704
RO_0002162: 43057
locus tag: LV780_RS21665
old locus tag: LV780_21665
pseudo: true
so part of: sequence
location: <43714..>43926
location: region:43714-43926:1
so has part: feature:43714-43926:1:exon
subclass of: SO_0000010

position:43714:1
position: 43714
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

position:43926:1
position: 43926
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:43714-43926:1:exon

LV780_RS21665
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 43057
locus tag: LV780_RS21665
old locus tag: LV780_21665
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011655415.1
GO function: GO:0005524 - ATP binding [Evidence IEA]
note: incomplete; partial in the middle of a contig; missing N-terminus and C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: ATP-binding protein
SIO_010081: LV780_RS21665
subclass of: SO_0000673
so part of: LV780_RS21665
location: <43714..>43926
location: region:43714-43926:1
so has part: feature:43714-43926:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:43714-43926:1:exon

LV780_RS21670
type: Gene
subclass of: SO_0000704
RO_0002162: 43057
locus tag: LV780_RS21670
old locus tag: LV780_21670
pseudo: true
so part of: sequence
location: <43956..44186
location: region:43956-44186:1
so has part: feature:43956-44186:1:exon
subclass of: SO_0000010

position:43956:1
position: 43956
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

position:44186:1
position: 44186
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:43956-44186:1:exon

LV780_RS21670
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 43057
locus tag: LV780_RS21670
old locus tag: LV780_21670
inference: COORDINATES: similar to AA sequence:RefSeq:WP_076612398.1
GO function: GO:0004803 - transposase activity [Evidence IEA]
GO process: GO:0006313 - transposition, DNA-mediated [Evidence IEA]
note: incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: Tn3 family transposase
SIO_010081: LV780_RS21670
subclass of: SO_0000673
so part of: LV780_RS21670
location: <43956..44186
location: region:43956-44186:1
so has part: feature:43956-44186:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:43956-44186:1:exon

LV780_RS21675
type: Gene
subclass of: SO_0000704
RO_0002162: 43057
locus tag: LV780_RS21675
old locus tag: LV780_21675
so part of: sequence
location: complement(44259..44627)
location: region:44259-44627:-1
so has part: feature:44259-44627:-1:exon
subclass of: SO_0000010

position:44259:-1
position: 44259
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:44627:-1
position: 44627
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:44259-44627:-1:exon

LV780_RS21675
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 43057
locus tag: LV780_RS21675
old locus tag: LV780_21675
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MNDFFIILAGVVLVGVPSTATASLSCLEPARPNLALLRDAGLSVEEVRSEFQTYFVDVEGFLNCINETSERVRVEARSAAYDLAQIRATFLNDVGSSPTPDGQVPADSNLDETGRLILFPLR
SIO_010081: LV780_RS21675
subclass of: SO_0000673
so part of: LV780_RS21675
location: complement(44259..44627)
location: region:44259-44627:-1
so has part: feature:44259-44627:-1:exon

WP_147326433.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:44259-44627:-1:exon

LV780_RS21680
type: Gene
subclass of: SO_0000704
RO_0002162: 43057
gene: repC
locus tag: LV780_RS21680
old locus tag: LV780_21680
so part of: sequence
location: complement(44620..45855)
location: region:44620-45855:-1
so has part: feature:44620-45855:-1:exon
subclass of: SO_0000010

position:44620:-1
position: 44620
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:45855:-1
position: 45855
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:44620-45855:-1:exon

LV780_RS21680
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 43057
gene: repC
locus tag: LV780_RS21680
old locus tag: LV780_21680
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011911237.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: replication initiation protein RepC
translation: MHLAYRQESELRPHLPKGMQRGDVERLLVICAPRLGLTSSLLHVLLVMMHHTRPEDWTSPKRDPMCFAAQSAIADDLEISPRALRAIERQLEDLGLLSRDTGAGGQRGKWGDFALGHSFAPLIERVPDLVALDAQRAAGRQRAQVLRRQLSALRRQLREKIEQLLTTVPKSPALPPLLSAMAALPRRYADLPLDRLELLRADLEVLHRQAAEALREAEREPCRSEADDRPHIQDTSYDDACICSVSSATKRTSGTPLVTVCSASAPDGAEGSKENKDGGYVSPHKPDLLTSFTPRALYNAASDDFRLYLDGYKRGVLPDAGTFIQAAIAILPDLGVNLSAWDEAAEAMGDLAAALSVLVIDANRFHPARPIHSPGGALRAFTRKARAGTLNLAGSLIGLLERSRNDRRCNE
SIO_010081: LV780_RS21680
subclass of: SO_0000673
so part of: LV780_RS21680
location: complement(44620..45855)
location: region:44620-45855:-1
so has part: feature:44620-45855:-1:exon

WP_117345324.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:44620-45855:-1:exon

LV780_RS21685
type: Gene
subclass of: SO_0000704
RO_0002162: 43057
locus tag: LV780_RS21685
old locus tag: LV780_21685
so part of: sequence
location: complement(46156..46575)
location: region:46156-46575:-1
so has part: feature:46156-46575:-1:exon
subclass of: SO_0000010

position:46156:-1
position: 46156
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:46575:-1
position: 46575
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:46156-46575:-1:exon

LV780_RS21685
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 43057
locus tag: LV780_RS21685
old locus tag: LV780_21685
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MGVDPDVASSVGLSQTSLGRDGLTQEVRQIRDAIEIYQINYWHSTGGENDRDVIIDNTVAGTYDEATGEFSWKKSSYRTGPDWLAEVAGGRREPVYETDSEGRRRIKVGEVNDYPGRLRAVALRFRDYEGRTYSEIVRY
SIO_010081: LV780_RS21685
subclass of: SO_0000673
so part of: LV780_RS21685
location: complement(46156..46575)
location: region:46156-46575:-1
so has part: feature:46156-46575:-1:exon

WP_233864377.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:46156-46575:-1:exon

LV780_RS21690
type: Gene
subclass of: SO_0000704
RO_0002162: 43057
locus tag: LV780_RS21690
old locus tag: LV780_21690
so part of: sequence
location: 47094..47375
location: region:47094-47375:1
so has part: feature:47094-47375:1:exon
subclass of: SO_0000010

position:47094:1
position: 47094
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:47375:1
position: 47375
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:47094-47375:1:exon

LV780_RS21690
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 43057
locus tag: LV780_RS21690
old locus tag: LV780_21690
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MITTDALQLFLQRGGQIEYRPVHTPKGYNWELWGVHVDGSSEPVVSSKTGETRMFKSADAVLAFHLRIYPDQGGVFIPAPKSDKPGLPSTDHE
SIO_010081: LV780_RS21690
subclass of: SO_0000673
so part of: LV780_RS21690
location: 47094..47375
location: region:47094-47375:1
so has part: feature:47094-47375:1:exon

WP_147326434.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:47094-47375:1:exon

LV780_RS21695
type: Gene
subclass of: SO_0000704
RO_0002162: 43057
locus tag: LV780_RS21695
old locus tag: LV780_21695
so part of: sequence
location: 47476..48087
location: region:47476-48087:1
so has part: feature:47476-48087:1:exon
subclass of: SO_0000010

position:47476:1
position: 47476
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:48087:1
position: 48087
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:47476-48087:1:exon

LV780_RS21695
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 43057
locus tag: LV780_RS21695
old locus tag: LV780_21695
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011911235.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: lytic transglycosylase domain-containing protein
translation: MASTIVAVPAHAEALKGPAFRLVAENCAPGVAPDIMEKLVATESGFHTYAIGVNGKDRASFRPTTSDEAAKLARDLIAQGKSIDMGLGQINSANLGWLDLTPESVFDPCRNLAAAEKVLRDGYERARAAGASREDALRQALSSYNTGSLTRGFANGYVDRVMGAKAAPTVASAPQPVVLADQKLDRNWDVFGGAGTSKELIFK
SIO_010081: LV780_RS21695
subclass of: SO_0000673
so part of: LV780_RS21695
location: 47476..48087
location: region:47476-48087:1
so has part: feature:47476-48087:1:exon

WP_233864380.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:47476-48087:1:exon

LV780_RS21700
type: Gene
subclass of: SO_0000704
RO_0002162: 43057
locus tag: LV780_RS21700
old locus tag: LV780_21700
so part of: sequence
location: 48173..48391
location: region:48173-48391:1
so has part: feature:48173-48391:1:exon
subclass of: SO_0000010

position:48173:1
position: 48173
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:48391:1
position: 48391
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:48173-48391:1:exon

LV780_RS21700
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 43057
locus tag: LV780_RS21700
old locus tag: LV780_21700
inference: COORDINATES: protein motif:HMM:NF016820.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: TrbC/VirB2 family protein
translation: MAEPAAAAGFTDFLNNIVEEFDAAKQPVALIALMLIGAGWLFNFVDLRRAGWAVAGVVLLYASTEVLSMITA
SIO_010081: LV780_RS21700
subclass of: SO_0000673
so part of: LV780_RS21700
location: 48173..48391
location: region:48173-48391:1
so has part: feature:48173-48391:1:exon

WP_233864392.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:48173-48391:1:exon

LV780_RS21705
type: Gene
subclass of: SO_0000704
RO_0002162: 43057
locus tag: LV780_RS21705
old locus tag: LV780_21705
so part of: sequence
location: 48408..48737
location: region:48408-48737:1
so has part: feature:48408-48737:1:exon
subclass of: SO_0000010

position:48408:1
position: 48408
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:48408-48737:1:exon

LV780_RS21705
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 43057
locus tag: LV780_RS21705
old locus tag: LV780_21705
inference: COORDINATES: similar to AA sequence:RefSeq:WP_016921259.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: type IV secretion system protein VirB3
translation: MEKVKLNEDPLFLALTRPAMIFGIPMEAFALSCGAAGLAMISADSILYLLLAVPLLVASRIIVERDQNAFQILFRWLDTSARCRNRAFWGGTTCSPLRLRRSFKVEEID
SIO_010081: LV780_RS21705
subclass of: SO_0000673
so part of: LV780_RS21705
location: 48408..48737
location: region:48408-48737:1
so has part: feature:48408-48737:1:exon

WP_011911233.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:48408-48737:1:exon