Cereibacter azotoformans strain SY5 plasmid p1, complete sequence.
Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodobacterales; Paracoccaceae; Cereibacter.
Isolation, Identification and Complete Genome Analysis of Rhodobacter sphaeroides SY5 with Enhancing Effect on Disease Resistance of Eriocheir sinensis
Submitted (18-DEC-2021) National Pathogen Collection Center for Aquatic Animals, Shanghai Ocean University, No.999,Hucheng ring road, Shanghai 201306, China
REFSEQ INFORMATION: The reference sequence is identical to\nCP090023.1.\nThe annotation was added by the NCBI Prokaryotic Genome Annotation\nPipeline (PGAP). Information about PGAP can be found here:\nhttps://www.ncbi.nlm.nih.gov/genome/annotation_prok/\n\n##Genome-Assembly-Data-START##\nAssembly Method :: canu v. 1.3\nGenome Representation :: Full\nExpected Final Version :: Yes\nGenome Coverage :: 165.02x\nSequencing Technology :: Illumina HiSeq; PacBio RSII\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI RefSeq\nAnnotation Date :: 12/08/2022 17:54:21\nAnnotation Pipeline :: NCBI Prokaryotic Genome\n Annotation Pipeline (PGAP)\nAnnotation Method :: Best-placed reference protein\n set; GeneMarkS-2+\nAnnotation Software revision :: 6.3\nFeatures Annotated :: Gene; CDS; rRNA; tRNA; ncRNA\nGenes (total) :: 4,393\nCDSs (total) :: 4,323\nGenes (coding) :: 4,157\nCDSs (with protein) :: 4,157\nGenes (RNA) :: 70\nrRNAs :: 4, 4, 4 (5S, 16S, 23S)\ncomplete rRNAs :: 4, 4, 4 (5S, 16S, 23S)\ntRNAs :: 55\nncRNAs :: 3\nPseudo Genes (total) :: 166\nCDSs (without protein) :: 166\nPseudo Genes (ambiguous residues) :: 0 of 166\nPseudo Genes (frameshifted) :: 80 of 166\nPseudo Genes (incomplete) :: 131 of 166\nPseudo Genes (internal stop) :: 25 of 166\nPseudo Genes (multiple problems) :: 61 of 166\nCRISPR Arrays :: 1\n##Genome-Annotation-Data-END##\nCOMPLETENESS: full length.
COORDINATES: similar to AA sequence:RefSeq:WP_002724802.1
Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_011910848.1
ParB N-terminal domain-containing protein
COORDINATES: ab initio prediction:GeneMarkS-2+
Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
COORDINATES: similar to AA sequence:RefSeq:WP_011911111.1
COORDINATES: similar to AA sequence:RefSeq:WP_011911110.1
GO:0016491 - oxidoreductase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011911109.1
COORDINATES: similar to AA sequence:RefSeq:WP_011911108.1
COORDINATES: similar to AA sequence:RefSeq:WP_011911107.1
COORDINATES: similar to AA sequence:RefSeq:WP_011911106.1
GO:0016765 - transferase activity, transferring alkyl or aryl (other than methyl) groups [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011911104.1
COORDINATES: similar to AA sequence:RefSeq:WP_012494462.1
COORDINATES: similar to AA sequence:RefSeq:WP_009563871.1
COORDINATES: similar to AA sequence:RefSeq:WP_011911101.1
COORDINATES: similar to AA sequence:RefSeq:WP_017140504.1
COORDINATES: similar to AA sequence:RefSeq:WP_009562022.1
GO:0009325 - nitrate reductase complex [Evidence IEA]
GO:0008940 - nitrate reductase activity [Evidence IEA]
GO:0042126 - nitrate metabolic process [Evidence IEA]
periplasmic nitrate reductase, NapE protein
COORDINATES: similar to AA sequence:RefSeq:WP_011331396.1
GO:0051539 - 4 iron, 4 sulfur cluster binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011331397.1
COORDINATES: similar to AA sequence:RefSeq:WP_011331398.1
periplasmic nitrate reductase subunit alpha
COORDINATES: similar to AA sequence:RefSeq:WP_011911095.1
nitrate reductase cytochrome c-type subunit
COORDINATES: similar to AA sequence:RefSeq:WP_011331400.1
COORDINATES: similar to AA sequence:RefSeq:WP_011911093.1
COORDINATES: similar to AA sequence:RefSeq:WP_011911092.1
GO:0055085 - transmembrane transport [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011911051.1
GO:0004170 - dUTP diphosphatase activity [Evidence IEA]; GO:0000287 - magnesium ion binding [Evidence IEA]
GO:0006226 - dUMP biosynthetic process [Evidence IEA]; GO:0046081 - dUTP catabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011911047.1
COORDINATES: similar to AA sequence:RefSeq:WP_011911046.1
sugar phosphate isomerase/epimerase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_011911045.1
COORDINATES: similar to AA sequence:RefSeq:WP_011911044.1
COORDINATES: similar to AA sequence:RefSeq:WP_011911043.1
COORDINATES: similar to AA sequence:RefSeq:WP_011911042.1
COORDINATES: similar to AA sequence:RefSeq:WP_011911041.1
peptidoglycan-binding domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_011911040.1
COORDINATES: similar to AA sequence:RefSeq:WP_011911039.1
COORDINATES: similar to AA sequence:RefSeq:WP_011911038.1
COORDINATES: similar to AA sequence:RefSeq:WP_011911037.1
COORDINATES: similar to AA sequence:RefSeq:WP_011911036.1
COORDINATES: similar to AA sequence:RefSeq:WP_011911035.1
COORDINATES: similar to AA sequence:RefSeq:WP_011911034.1
COORDINATES: similar to AA sequence:RefSeq:WP_011911033.1
ATP-binding cassette domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_011911032.1
COORDINATES: similar to AA sequence:RefSeq:WP_011911031.1
SUMF1/EgtB/PvdO family nonheme iron enzyme
COORDINATES: similar to AA sequence:RefSeq:WP_002719236.1
GO:0008080 - N-acetyltransferase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011911029.1
hydrogen peroxide-inducible genes activator
COORDINATES: similar to AA sequence:RefSeq:WP_011911028.1
sodium-dependent bicarbonate transport family permease
COORDINATES: similar to AA sequence:RefSeq:WP_011911027.1
COORDINATES: similar to AA sequence:RefSeq:WP_013066323.1
form I ribulose bisphosphate carboxylase large subunit
COORDINATES: similar to AA sequence:RefSeq:WP_011313135.1
ribulose bisphosphate carboxylase small subunit
COORDINATES: similar to AA sequence:RefSeq:WP_011911024.1
COORDINATES: similar to AA sequence:RefSeq:WP_011911023.1
COORDINATES: similar to AA sequence:RefSeq:WP_011911022.1
COORDINATES: similar to AA sequence:RefSeq:WP_011911021.1
GO:0004360 - glutamine-fructose-6-phosphate transaminase (isomerizing) activity [Evidence IEA]
GO:0006040 - amino sugar metabolic process [Evidence IEA]; GO:0009252 - peptidoglycan biosynthetic process [Evidence IEA]
glutamine--fructose-6-phosphate transaminase (isomerizing)
COORDINATES: similar to AA sequence:RefSeq:WP_011911020.1
GO:0003978 - UDP-glucose 4-epimerase activity [Evidence IEA]
GO:0006012 - galactose metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011911019.1
COORDINATES: similar to AA sequence:RefSeq:WP_011911018.1
COORDINATES: similar to AA sequence:RefSeq:WP_011911017.1
COORDINATES: similar to AA sequence:RefSeq:WP_011911016.1
GO:0015159 - polysaccharide transmembrane transporter activity [Evidence IEA]
GO:0015774 - polysaccharide transport [Evidence IEA]
polysaccharide biosynthesis/export family protein
COORDINATES: similar to AA sequence:RefSeq:WP_011911015.1
COORDINATES: similar to AA sequence:RefSeq:WP_011911014.1
COORDINATES: similar to AA sequence:RefSeq:WP_011911013.1
GO:0016757 - glycosyltransferase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011911012.1
COORDINATES: similar to AA sequence:RefSeq:WP_007635327.1
GO:0004803 - transposase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011911011.1
COORDINATES: similar to AA sequence:RefSeq:WP_011911010.1
COORDINATES: protein motif:HMM:NF018458.2
COORDINATES: similar to AA sequence:RefSeq:WP_076611756.1
GO:0003677 - DNA binding [Evidence IEA]; GO:0004803 - transposase activity [Evidence IEA]
GO:0006313 - transposition, DNA-mediated [Evidence IEA]
frameshifted; incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_076611133.1
COORDINATES: similar to AA sequence:RefSeq:WP_011661702.1
COORDINATES: similar to AA sequence:RefSeq:WP_011840041.1
COORDINATES: similar to AA sequence:RefSeq:WP_002724782.1
COORDINATES: similar to AA sequence:RefSeq:WP_002724780.1
GO:0003824 - catalytic activity [Evidence IEA]
NAD-dependent epimerase/dehydratase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_011911073.1
COORDINATES: similar to AA sequence:RefSeq:WP_011842803.1
GO:0042132 - fructose 1,6-bisphosphate 1-phosphatase activity [Evidence IEA]
GO:0005975 - carbohydrate metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013067557.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0008974 - phosphoribulokinase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011842804.1
GO:0004802 - transketolase activity [Evidence IEA]
GO:0006098 - pentose-phosphate shunt [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011339168.1
GO:0006094 - gluconeogenesis [Evidence IEA]; GO:0019682 - glyceraldehyde-3-phosphate metabolic process [Evidence IEA]; GO:0006096 - glycolytic process [Evidence IEA]
type I glyceraldehyde-3-phosphate dehydrogenase
COORDINATES: similar to AA sequence:RefSeq:WP_011339169.1
GO:0004332 - fructose-bisphosphate aldolase activity [Evidence IEA]
GO:0006096 - glycolytic process [Evidence IEA]
catalyzes the reversible aldol condensation of dihydroxyacetonephosphate and glyceraldehyde 3-phosphate in the Calvin cycle, glycolysis, and/or gluconeogenesis; catalyzes the reversible aldol condensation of dihydroxyacetonephosphate and glyceraldehyde 3-phosphate in the Calvin cycle, glycolysis, and/or gluconeogenesis; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_011911067.1
COORDINATES: similar to AA sequence:RefSeq:WP_011665373.1
COORDINATES: similar to AA sequence:RefSeq:WP_011911065.1
COORDINATES: nucleotide motif:Rfam:14.4:RF00177
Derived by automated computational analysis using gene prediction method: cmsearch.
Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
COORDINATES: nucleotide motif:Rfam:14.4:RF02541
COORDINATES: nucleotide motif:Rfam:14.4:RF00001
COORDINATES: similar to AA sequence:RefSeq:WP_015740139.1
COORDINATES: similar to AA sequence:RefSeq:WP_011910609.1
COORDINATES: similar to AA sequence:RefSeq:WP_009465831.1
TnpB, as the term is used for proteins encoded by IS66 family insertion elements, is considered an accessory protein, since TnpC, encoded by a neighboring gene, is a DDE family transposase; Derived by automated computational analysis using gene prediction method: Protein Homology.
IS66 family insertion sequence element accessory protein TnpB
COORDINATES: similar to AA sequence:RefSeq:WP_011911248.1
COORDINATES: similar to AA sequence:RefSeq:WP_011910612.1
COORDINATES: similar to AA sequence:RefSeq:WP_011331435.1
incomplete; partial in the middle of a contig; missing N-terminus and C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: protein motif:HMM:NF025663.2
ATP-grasp fold amidoligase family protein
COORDINATES: protein motif:HMM:NF016903.2
COORDINATES: similar to AA sequence:RefSeq:WP_009827048.1
frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_012642355.1
COORDINATES: similar to AA sequence:RefSeq:WP_002724797.1
glycoside hydrolase family 99-like domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_002724798.1
COORDINATES: similar to AA sequence:RefSeq:WP_011840036.1
COORDINATES: similar to AA sequence:RefSeq:WP_009806842.1
COORDINATES: similar to AA sequence:RefSeq:WP_002724804.1
COORDINATES: similar to AA sequence:RefSeq:WP_011840032.1
GO:0008830 - dTDP-4-dehydrorhamnose 3,5-epimerase activity [Evidence IEA]
GO:0019305 - dTDP-rhamnose biosynthetic process [Evidence IEA]; GO:0009243 - O antigen biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_002724808.1
GO:0008460 - dTDP-glucose 4,6-dehydratase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF012888.2
COORDINATES: similar to AA sequence:RefSeq:WP_008209701.1
GO:0008831 - dTDP-4-dehydrorhamnose reductase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_002724812.1
GO:0008879 - glucose-1-phosphate thymidylyltransferase activity [Evidence IEA]
glucose-1-phosphate thymidylyltransferase RfbA
COORDINATES: similar to AA sequence:RefSeq:WP_011911007.1
COORDINATES: similar to AA sequence:RefSeq:WP_002724672.1
carboxymuconolactone decarboxylase family protein
COORDINATES: protein motif:HMM:NF012573.2
COORDINATES: similar to AA sequence:RefSeq:WP_017208408.1
COORDINATES: similar to AA sequence:RefSeq:WP_011910658.1
COORDINATES: similar to AA sequence:RefSeq:WP_019955914.1
sulfate ABC transporter substrate-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_002724659.1
GO:0055052 - ATP-binding cassette (ABC) transporter complex, substrate-binding subunit-containing [Evidence IEA]; GO:0005886 - plasma membrane [Evidence IEA]
GO:0015419 - ABC-type sulfate transporter activity [Evidence IEA]
GO:0008272 - sulfate transport [Evidence IEA]
sulfate ABC transporter permease subunit CysT
COORDINATES: similar to AA sequence:RefSeq:WP_002724656.1
sulfate ABC transporter permease subunit CysW
COORDINATES: similar to AA sequence:RefSeq:WP_011910653.1
COORDINATES: similar to AA sequence:RefSeq:WP_011910998.1
COORDINATES: similar to AA sequence:RefSeq:WP_011910997.1
COORDINATES: similar to AA sequence:RefSeq:WP_011910996.1
COORDINATES: similar to AA sequence:RefSeq:WP_011910995.1
low molecular weight protein-tyrosine-phosphatase
COORDINATES: similar to AA sequence:RefSeq:WP_011910994.1
GO:0045226 - extracellular polysaccharide biosynthetic process [Evidence IEA]
polysaccharide biosynthesis tyrosine autokinase
COORDINATES: similar to AA sequence:RefSeq:WP_009565458.1
GO:0004476 - mannose-6-phosphate isomerase activity [Evidence IEA]
GO:0009103 - lipopolysaccharide biosynthetic process [Evidence IEA]
mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase
COORDINATES: similar to AA sequence:RefSeq:WP_011331334.1
COORDINATES: similar to AA sequence:RefSeq:WP_013065872.1
UTP--glucose-1-phosphate uridylyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_011910991.1
UDP-glucose/GDP-mannose dehydrogenase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_012643395.1
GO:0016787 - hydrolase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011910986.1
COORDINATES: similar to AA sequence:RefSeq:WP_011910985.1
COORDINATES: similar to AA sequence:RefSeq:WP_011910983.1
COORDINATES: similar to AA sequence:RefSeq:WP_007792467.1
COORDINATES: similar to AA sequence:RefSeq:WP_017273620.1
type IV toxin-antitoxin system AbiEi family antitoxin domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_019627883.1
incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
nucleotidyl transferase AbiEii/AbiGii toxin family protein
COORDINATES: protein motif:HMM:NF023701.2
GSU2403 family nucleotidyltransferase fold protein
COORDINATES: similar to AA sequence:RefSeq:WP_011910980.1
type II toxin-antitoxin system prevent-host-death family antitoxin
COORDINATES: similar to AA sequence:RefSeq:WP_011842167.1
COORDINATES: similar to AA sequence:RefSeq:WP_008283078.1
HAMP domain-containing sensor histidine kinase
COORDINATES: similar to AA sequence:RefSeq:WP_011646324.1
COORDINATES: similar to AA sequence:RefSeq:WP_011910977.1
Cys/Met metabolism pyridoxal-phosphate-dependent enzyme
COORDINATES: similar to AA sequence:RefSeq:WP_008283081.1
COORDINATES: similar to AA sequence:RefSeq:WP_011804234.1
ferric reductase-like transmembrane domain-containing protein
COORDINATES: protein motif:HMM:NF014814.2
GO:0003677 - DNA binding [Evidence IEA]; GO:0000150 - DNA strand exchange activity [Evidence IEA]
GO:0006310 - DNA recombination [Evidence IEA]
helix-turn-helix domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_014745671.1
GO:0015501 - glutamate:sodium symporter activity [Evidence IEA]
GO:0015813 - L-glutamate transmembrane transport [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_001138082.1
COORDINATES: similar to AA sequence:RefSeq:WP_005253334.1
COORDINATES: similar to AA sequence:RefSeq:WP_000767829.1
COORDINATES: similar to AA sequence:RefSeq:WP_008208328.1
transcriptional regulator/antitoxin MazE
COORDINATES: similar to AA sequence:RefSeq:WP_011911161.1
GO:0016301 - kinase activity [Evidence IEA]
type II toxin-antitoxin system death-on-curing family toxin
COORDINATES: protein motif:HMM:NF024139.2
COORDINATES: similar to AA sequence:RefSeq:WP_010565366.1
COORDINATES: protein motif:HMM:NF024242.2
COORDINATES: similar to AA sequence:RefSeq:WP_017140495.1
COORDINATES: similar to AA sequence:RefSeq:WP_018859149.1
GO:0004386 - helicase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF020387.2
COORDINATES: similar to AA sequence:RefSeq:WP_011331337.1
COORDINATES: similar to AA sequence:RefSeq:WP_011910953.1
COORDINATES: similar to AA sequence:RefSeq:WP_011910952.1
COORDINATES: protein motif:HMM:NF022822.2
COORDINATES: similar to AA sequence:RefSeq:WP_011910950.1
COORDINATES: similar to AA sequence:RefSeq:WP_011910947.1
COORDINATES: similar to AA sequence:RefSeq:WP_007709700.1
type II toxin-antitoxin system RelE/ParE family toxin
COORDINATES: similar to AA sequence:RefSeq:WP_043766079.1
COORDINATES: protein motif:HMM:NF024949.2
helix-turn-helix transcriptional regulator
COORDINATES: similar to AA sequence:RefSeq:WP_011910939.1
type II toxin-antitoxin system HipA family toxin
COORDINATES: similar to AA sequence:RefSeq:WP_028713484.1
incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_011910937.1
COORDINATES: similar to AA sequence:RefSeq:WP_011910934.1
COORDINATES: similar to AA sequence:RefSeq:WP_009565482.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0016301 - kinase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011910931.1
COORDINATES: similar to AA sequence:RefSeq:WP_076611978.1
frameshifted; incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
internal stop; incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_011910929.1
COORDINATES: similar to AA sequence:RefSeq:WP_011331338.1
COORDINATES: similar to AA sequence:RefSeq:WP_011910927.1
methanogen output domain 1-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_011910926.1
COORDINATES: similar to AA sequence:RefSeq:WP_011910925.1
COORDINATES: similar to AA sequence:RefSeq:WP_011910922.1
COORDINATES: similar to AA sequence:RefSeq:WP_011910921.1
COORDINATES: similar to AA sequence:RefSeq:WP_011331345.1
COORDINATES: similar to AA sequence:RefSeq:WP_011331344.1
COORDINATES: similar to AA sequence:RefSeq:WP_011910918.1
COORDINATES: similar to AA sequence:RefSeq:WP_011910917.1
GO:0016759 - cellulose synthase activity [Evidence IEA]; GO:0035438 - cyclic-di-GMP binding [Evidence IEA]
GO:0030244 - cellulose biosynthetic process [Evidence IEA]; GO:0006011 - UDP-glucose metabolic process [Evidence IEA]
UDP-forming cellulose synthase catalytic subunit
COORDINATES: similar to AA sequence:RefSeq:WP_011910916.1
GO:0006011 - UDP-glucose metabolic process [Evidence IEA]
cellulose biosynthesis cyclic di-GMP-binding regulatory protein BcsB
COORDINATES: similar to AA sequence:RefSeq:WP_011910915.1
GO:0004553 - hydrolase activity, hydrolyzing O-glycosyl compounds [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011910914.1
COORDINATES: similar to AA sequence:RefSeq:WP_011910913.1
sensor domain-containing diguanylate cyclase
COORDINATES: protein motif:HMM:NF012772.2
COORDINATES: similar to AA sequence:RefSeq:WP_011910911.1
COORDINATES: similar to AA sequence:RefSeq:WP_011842378.1
COORDINATES: similar to AA sequence:RefSeq:WP_009489154.1
COORDINATES: similar to AA sequence:RefSeq:WP_012556062.1
type II toxin-antitoxin system HicA family toxin
COORDINATES: similar to AA sequence:RefSeq:WP_011910908.1
type II toxin-antitoxin system HicB family antitoxin
COORDINATES: similar to AA sequence:RefSeq:WP_011910907.1
COORDINATES: similar to AA sequence:RefSeq:WP_011910906.1
COORDINATES: similar to AA sequence:RefSeq:WP_011331413.1
GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011331361.1
type II toxin-antitoxin system VapB family antitoxin
COORDINATES: similar to AA sequence:RefSeq:WP_009565491.1
stability determinant protein; incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
VapC toxin family PIN domain ribonuclease
COORDINATES: similar to AA sequence:RefSeq:WP_006956108.1
COORDINATES: similar to AA sequence:RefSeq:WP_011090936.1
COORDINATES: similar to AA sequence:RefSeq:WP_011910903.1
GO:0004540 - ribonuclease activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF013752.2
COORDINATES: protein motif:HMM:NF025080.2
COORDINATES: similar to AA sequence:RefSeq:WP_014881212.1
COORDINATES: similar to AA sequence:RefSeq:WP_011910896.1
COORDINATES: similar to AA sequence:RefSeq:WP_018898644.1
COORDINATES: similar to AA sequence:RefSeq:WP_018898645.1
GO:0004521 - endoribonuclease activity [Evidence IEA]; GO:0005515 - protein binding [Evidence IEA]
putative toxin-antitoxin system toxin component, PIN family
COORDINATES: similar to AA sequence:RefSeq:WP_011389727.1
COORDINATES: protein motif:HMM:NF016876.2
COORDINATES: similar to AA sequence:RefSeq:WP_011910887.1
COORDINATES: similar to AA sequence:RefSeq:WP_011910883.1
COORDINATES: similar to AA sequence:RefSeq:WP_011910884.1
COORDINATES: similar to AA sequence:RefSeq:WP_011910882.1
YadA C-terminal domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_011331401.1
COORDINATES: similar to AA sequence:RefSeq:WP_017140496.1
COORDINATES: similar to AA sequence:RefSeq:WP_010209029.1
COORDINATES: similar to AA sequence:RefSeq:WP_014199745.1
COORDINATES: similar to AA sequence:RefSeq:WP_011910877.1
COORDINATES: similar to AA sequence:RefSeq:WP_011910876.1
COORDINATES: similar to AA sequence:RefSeq:WP_011910874.1
COORDINATES: similar to AA sequence:RefSeq:WP_017140497.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0016887 - ATP hydrolysis activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF017273.2
COORDINATES: similar to AA sequence:RefSeq:WP_007566950.1
GO:0051983 - regulation of chromosome segregation [Evidence IEA]
type II toxin-antitoxin system ParD family antitoxin
COORDINATES: protein motif:HMM:NF014691.2
COORDINATES: similar to AA sequence:RefSeq:WP_007803035.1
COORDINATES: similar to AA sequence:RefSeq:WP_011910865.1
nucleotidyltransferase domain-containing protein
COORDINATES: protein motif:HMM:NF015549.2
COORDINATES: protein motif:HMM:NF019846.2
COORDINATES: similar to AA sequence:RefSeq:WP_011331343.1
GO:0009882 - blue light photoreceptor activity [Evidence IEA]; GO:0071949 - FAD binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011910768.1
GO:0007165 - signal transduction [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_003596089.1
COORDINATES: similar to AA sequence:RefSeq:WP_012187061.1
COORDINATES: similar to AA sequence:RefSeq:WP_008613282.1
COORDINATES: similar to AA sequence:RefSeq:WP_011910861.1
COORDINATES: similar to AA sequence:RefSeq:WP_007812581.1
type II toxin-antitoxin system CcdA family antitoxin
COORDINATES: similar to AA sequence:RefSeq:WP_005369487.1
COORDINATES: similar to AA sequence:RefSeq:WP_007803336.1
GO:0051304 - chromosome separation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_009179448.1
COORDINATES: similar to AA sequence:RefSeq:WP_011910857.1
COORDINATES: similar to AA sequence:RefSeq:WP_018431027.1
COORDINATES: similar to AA sequence:RefSeq:WP_011910855.1
Mu transposase C-terminal domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_005848984.1
GO:0008657 - DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) inhibitor activity [Evidence IEA]
GO:0006276 - plasmid maintenance [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_009573267.1
COORDINATES: similar to AA sequence:RefSeq:WP_011910852.1
GO:0015074 - DNA integration [Evidence IEA]; GO:0006310 - DNA recombination [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011910851.1
GO:0008676 - 3-deoxy-8-phosphooctulonate synthase activity [Evidence IEA]
GO:0009058 - biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_009489075.1
COORDINATES: similar to AA sequence:RefSeq:WP_015496278.1
COORDINATES: similar to AA sequence:RefSeq:WP_009565041.1
dTDP-4-dehydrorhamnose 3,5-epimerase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_002724803.1