Ammonifex degensii KC4 plasmid pADEG01, complete sequence.
type: Entry
definition: Ammonifex degensii KC4 plasmid pADEG01, complete sequence.
sequence version: NC_013386.1
sequence date: 2023-04-09
sequence: sequence
division: CON
label: NC_013386.1
type: RefSeq
SIO_000068: refseq
dblink: PRJNA224116
dblink: SAMN02598268
keyword: RefSeq
source: Ammonifex degensii KC4
organism: Ammonifex degensii KC4
taxonomy: Bacteria; Bacillota; Clostridia; Thermoanaerobacterales; Thermoanaerobacteraceae; Ammonifex.
reference: 1
reference: 2
comment: REFSEQ INFORMATION: The reference sequence is identical to\nCP001786.1.\nURL -- http://www.jgi.doe.gov\nJGI Project ID: 4003801\nSource DNA available from DSMZ: DSM 10501 (http://www.dsmz.de)\nContacts: Cheryl Kerfeld (CKerfeld@lbl.gov)\n David Bruce (microbe@cuba.jgi-psf.org)\nAnnotation done by JGI-ORNL and JGI-PGF\nUCLA undergraduates in LS187 contributed to the sequencing and\nanalysis of this genome.\nAlso, students and faculty at the following schools participated in\nanalysis of the A. degensii genome: Austin College (Professor\nKelynne Reed); Bowling Green State University (Professor Zhaohui\nXu); University of Missouri-Columbia, Professor Sharyn Freyermuth);\nThe University of St. Thomas (Professor Jayna L. Ditty); St. Cloud\nState University (Professor Christopher Kvaal); University of\nNebraska (Professor Cheryl Bailey); University of Southern\nMississippi (Professor Sabine Heinhorst); (University of South\nFlorida (Professor Kathleen Scott); Michigan State University\n(Professor Robert Britton); University of California, Los Angeles\n(Professor Erin Sanders-Lorenz); Northern Illinois University\n(Professor Rick Johns); Hiram College (Professors Stuart Gordon and\nBrad Goodner)\nFinishing done by JGI-LANL\nFinished microbial genomes have been curated to close all gaps with\ngreater than 98% coverage of at least two independent clones. Each\nbase pair has a minimum q (quality) value of 30 and the total error\nrate is less than one per 50000.\nThe JGI and collaborators endorse the principles for the\ndistribution and use of large scale sequencing data adopted by the\nlarger genome sequencing community and urge users of this data to\nfollow them. it is our intention to publish the work of this\nproject in a timely fashion and we welcome collaborative\ninteraction on the project and analysis.\n(http://www.genome.gov/page.cfm?pageID=10506376).\nThe annotation was added by the NCBI Prokaryotic Genome Annotation\nPipeline (PGAP). Information about PGAP can be fo…

sequence
subclass of: SO_0000155
sequence length: 27830
topology: circular
so has quality: SO_0000988
location: 1..27830
location: region:1-27830:1
RO_0002162: 429009

NC_013386
type: RefSeq
SIO_000068: refseq

PRJNA224116
type: BioProject
SIO_000068: bioproject

SAMN02598268
type: BioSample
SIO_000068: biosample

1
title: Complete sequence of plasmid of Ammonifex degensii KC4
author: Kerfeld, C.
author: Goodner, B.
author: Huber, H.
author: Stetter, K.
author: Lucas, S.
author: Copeland, A.
author: Lapidus, A.
author: Glavina del Rio, T.
author: Dalin, E.
author: Tice, H.
author: Bruce, D.
author: Goodwin, L.
author: Pitluck, S.
author: Saunders, E.
author: Brettin, T.
author: Detter, J.C.
author: Han, C.
author: Larimer, F.
author: Land, M.
author: Hauser, L.
author: Kyrpides, N.
author: Ovchinnikova, G.
author: Richardson, P.
journal: Unpublished

2
title: Direct Submission
author: Kerfeld, C.
author: Goodner, B.
author: Huber, H.
author: Stetter, K.
author: Lucas, S.
author: Copeland, A.
author: Lapidus, A.
author: Glavina del Rio, T.
author: Dalin, E.
author: Tice, H.
author: Bruce, D.
author: Goodwin, L.
author: Pitluck, S.
author: Saunders, E.
author: Brettin, T.
author: Detter, J.C.
author: Han, C.
author: Larimer, F.
author: Land, M.
author: Hauser, L.
author: Kyrpides, N.
author: Ovchinnikova, G.
author: Richardson, P.
journal: Submitted (02-OCT-2009) US DOE Joint Genome Institute, 2800 Mitchell Drive B310, Walnut Creek, CA 94598-1698, USA

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:27830:1
position: 27830
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-27830:1:source
so part of: sequence
organism: Ammonifex degensii KC4
mol type: genomic DNA
strain: KC4
culture collection: DSM:10501
type material: type strain of Ammonifex degensii
plasmid: pADEG01

429009
type: Taxonomy
SIO_000068: taxonomy

ADEG_RS11505
type: Gene
subclass of: SO_0000704
RO_0002162: 429009
locus tag: ADEG_RS11505
old locus tag: Adeg_2153
so part of: sequence
location: complement(95..3451)
location: region:95-3451:-1
so has part: feature:95-3451:-1:exon
subclass of: SO_0000010

position:95:-1
position: 95
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3451:-1
position: 3451
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:95-3451:-1:exon

ADEG_RS11505
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 429009
locus tag: ADEG_RS11505
old locus tag: Adeg_2153
inference: COORDINATES: protein motif:HMM:NF019450.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: copper amine oxidase N-terminal domain-containing protein
translation: MIKARKRWLSVLLTVAMLAALLVPLATPAQAACTYSMDYVQKISAGYSGKIGTLIITMDPVSAEGSVGKYVVLSLPSSPSGYVLFPGMTEGQIASSISGTNYFNTSTAAPTAPAPSYTLPAPIDVAGQGTGTIQNGAFSVPVTLTGVNQDLQGKLELTVSGSGFPTGQTVTGTLGSGVVAKATVASDVYAATYVNPALAPASAGSGQVYTDKTYSVATGTGGALLLQDGTTTVAVSFDGKTFYRYNSTTSTADTSTVYLTFGTAVPVGATVTVTLVKLGDGSYTVNYNSSSKVYELKSGTTVVAKSTDGKAFTDWDATNNKSYGITVLTLSAPVAPSTTVTVSTAYGVSWVTVSSQPNWNGYTVEIAVNGSVTAVSNGKYVGDGTVTVTVKDTAGAQKATFSGTVYFARTGAQALTLGSSSDPAASAASAQATVTANTVAGVQPAPSGVASFRVERISDTKIKLYVTGLAAGADPTSDSRIRIPLVIAVPTGVSGDITLTAEAPSTSTFSSGSVVIARVGVGKVTLAVDNVPSISSRGGEIGVIKIKEDIPGALQDSGGTPALKLRLPPGFRWSSVSADRIWGDQGLVDSINKNYKITNDRRDLELWNSVPSKQGTYFELKATIDVDESVAKVGDVKVVVSGATTAEPSELIVARYGEYGVTVKAYSTTDIIAGKVAQDIGKLEIKENIPGSLVSGRTITLTLPENVRWSQAPMIDDELSQSYGDISFDSKLVGSDGRMLKLTFYGSTEGQTEPAKIVLKNMQVTPAADFSGDLKVEVGGSQGVTGTVVLAKVKSPVTATASSTPQVIIGKPDQPVGDLTITESMADAIHGTVTGWKKDDEGYVTSVTPERAPQAKLIVEAPPGVIFSGTPKVEVVEGDLQIDSQAVSTDKTPALEGQIIIPIKSSSTKPSTIKISGIKVTIDRTVPEGDLVFKVKGTAVDETLKRWDADKGEFVDDELFQGHDTVAEAAVAKCVTPAPSETISKAIFKIGESKYTIGDKEYTMDAAAYIENGRAFAPMRYVAYAAGVTPDNILWNDATRTATFIKGDRVVQVTDGSNILVVNGTQVAMDVKAVIKDGRFFLPVRWLSVALGCQVEWDAKNQQVIVTRNVVQVPGQQQ
SIO_010081: ADEG_RS11505
subclass of: SO_0000673
so part of: ADEG_RS11505
location: complement(95..3451)
location: region:95-3451:-1
so has part: feature:95-3451:-1:exon

WP_012818235.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:95-3451:-1:exon

ADEG_RS11510
type: Gene
subclass of: SO_0000704
RO_0002162: 429009
locus tag: ADEG_RS11510
old locus tag: Adeg_2154
so part of: sequence
location: complement(3672..5972)
location: region:3672-5972:-1
so has part: feature:3672-5972:-1:exon
subclass of: SO_0000010

position:3672:-1
position: 3672
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5972:-1
position: 5972
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3672-5972:-1:exon

ADEG_RS11510
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 429009
locus tag: ADEG_RS11510
old locus tag: Adeg_2154
inference: COORDINATES: protein motif:HMM:NF015380.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: clostripain-related cysteine peptidase
translation: MIKARKRWLSVLLTVAMLAALLVPLAQPAQAACTYSMTYIQKVKAGGTYDIGTLVVTVDPVSAEASVGRYVVLSLPGSPSGYELFPGLSENEIAAKITGTNYFNTANGATFKVERLSAREVRLWVGSIATAGIAPGDDSRILIPLRITVPSGVSGDIILTVSAPSTSAFLNGSLVIARADANLPDWVFAVYMAADNDLSRFALADLREMLSVPGLGGNVVVVLLDLPGSENDGVYLVQRGTLQPVPGWPQGQELNTGDPSLLAAFLDFVRNKFPAGRYALILWDHGAGWRKLQPRGVCFDDLSRDFLMVPELRQALVRARVPLDLVGFDACFMGMVEVAYELEGLASVMVASEEGEPGDGWPYDKILTWLVANASTADGKALGRAIVSAYTQAYQGYGALTMSAIDLGCIKDVREKTDSLAVALLRNFDSDKTQISQAVQNARSYHREEFRDLYDYASLLTSYCSSSVEIRAAAQDLQKSIERAVLANGTTQYDDRSRGLSIWLPPESQAYLELLSYYGVDFASMFNWYSNLRFAKESRWGHFIKKWILDESTPIATAFGVESTDPADGATDVPVDKTITLTYNTPVRPGPAYGKIALLDASGRKVSIRKKLAGTVFTIDPVKNLSYGTTYTLVLPAGAVKDGAGNLSEEFVLSFTTEPPDVTPPAVVETDPPAGGVVDSLKPVLKVRFSEQVYTGRNYSRIAIYDESGRRVAVSKRISGDLLEVRPVGALKPGMAYRLYLPAGAVKDKAGNLSEEFELVFVAPGP
SIO_010081: ADEG_RS11510
subclass of: SO_0000673
so part of: ADEG_RS11510
location: complement(3672..5972)
location: region:3672-5972:-1
so has part: feature:3672-5972:-1:exon

WP_012818236.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3672-5972:-1:exon

ADEG_RS10900
type: Gene
subclass of: SO_0000704
RO_0002162: 429009
locus tag: ADEG_RS10900
old locus tag: Adeg_2155
so part of: sequence
location: complement(6207..6857)
location: region:6207-6857:-1
so has part: feature:6207-6857:-1:exon
subclass of: SO_0000010

position:6207:-1
position: 6207
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6857:-1
position: 6857
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6207-6857:-1:exon

ADEG_RS10900
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 429009
locus tag: ADEG_RS10900
old locus tag: Adeg_2155
inference: COORDINATES: protein motif:HMM:NF019450.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: copper amine oxidase N-terminal domain-containing protein
translation: MLRNFRKVTVAVLVVALLILTAAWAAVAVQAPRVVVDGRLISCDPPPFISAGRVFVPVRILAQAMGYKVEWDADNRVVVLERNVDGVDLTSGLPPMEGLEDALGVDKPASVGGQQYVRGFLINRSVSWVLDGKFKELRFFYGAVDTASTPFEQPGKGVSYALVVADGKVVAELSAEKGQSPQEIRISVAGVKRLSIERAWRHYHGGVVINPVAISN
SIO_010081: ADEG_RS10900
subclass of: SO_0000673
so part of: ADEG_RS10900
location: complement(6207..6857)
location: region:6207-6857:-1
so has part: feature:6207-6857:-1:exon

WP_245528005.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:6207-6857:-1:exon

ADEG_RS10905
type: Gene
subclass of: SO_0000704
RO_0002162: 429009
locus tag: ADEG_RS10905
old locus tag: Adeg_2156
so part of: sequence
location: complement(6936..7898)
location: region:6936-7898:-1
so has part: feature:6936-7898:-1:exon
subclass of: SO_0000010

position:6936:-1
position: 6936
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7898:-1
position: 7898
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6936-7898:-1:exon

ADEG_RS10905
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 429009
locus tag: ADEG_RS10905
old locus tag: Adeg_2156
inference: COORDINATES: protein motif:HMM:NF025616.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF4349 domain-containing protein
translation: MRCRRVQELIRDGELTGEARAHIAECPSCRRVYLLWQEVKRGLSLPAPAAPPGFKDRVMAQLSAPEKEAGRSPGRLRLVLAVAAGLLVMAGSAWAFFKGTFSPPPPAPPPVVADRSSGSSTPVLPDKEKVPGAGQGEEKAGGAEAPEKRQSPSPGASLAPAPAEGQRETNSPGARGEASPPRAGAQPQAELPRAFLSHPQLARSGFVELRVADVARAKGQVRNLARQFGAQENHELPVDGGIELAFALPSSQGEAFVKALCGSGIGSVQDRWESSRDVTQQLAELKARCEYASPEERRALEGEVKKLEADTVLVWLVAGR
SIO_010081: ADEG_RS10905
subclass of: SO_0000673
so part of: ADEG_RS10905
location: complement(6936..7898)
location: region:6936-7898:-1
so has part: feature:6936-7898:-1:exon

WP_012818238.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:6936-7898:-1:exon

ADEG_RS10910
type: Gene
subclass of: SO_0000704
RO_0002162: 429009
locus tag: ADEG_RS10910
old locus tag: Adeg_2157
so part of: sequence
location: 8016..8261
location: region:8016-8261:1
so has part: feature:8016-8261:1:exon
subclass of: SO_0000010

position:8016:1
position: 8016
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8261:1
position: 8261
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8016-8261:1:exon

ADEG_RS10910
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 429009
locus tag: ADEG_RS10910
old locus tag: Adeg_2157
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011392209.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: AbrB/MazE/SpoVT family DNA-binding domain-containing protein
translation: MIIIETARLGSKYQMVLPLSVRKALGVSAGDELLVLLLDNAAVLLPKPKSYADHLLGLHREVWADINPEKYLEEMRSWGNS
SIO_010081: ADEG_RS10910
subclass of: SO_0000673
so part of: ADEG_RS10910
location: 8016..8261
location: region:8016-8261:1
so has part: feature:8016-8261:1:exon

WP_012818239.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:8016-8261:1:exon

ADEG_RS10915
type: Gene
subclass of: SO_0000704
RO_0002162: 429009
locus tag: ADEG_RS10915
old locus tag: Adeg_2158
so part of: sequence
location: 8246..8866
location: region:8246-8866:1
so has part: feature:8246-8866:1:exon
subclass of: SO_0000010

position:8246:1
position: 8246
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8866:1
position: 8866
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8246-8866:1:exon

ADEG_RS10915
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 429009
locus tag: ADEG_RS10915
old locus tag: Adeg_2158
inference: COORDINATES: protein motif:HMM:NF024803.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: helix-turn-helix domain-containing protein
translation: MGELLTPKQVAEKLKVSRKTVVKWIRSGKLPGRKIGTLWRVDADDLEAFLGRAETGKAPAPEARHPQVFRPADVLRLTGVNRKTLHYWIREGFVSPSIAGSYGTHKKHLWSFGDLVAIRALQKLRQSGIDLHSAELARTLVRHIQAREGIESVPPDTLLATDGRTAFEVGPDDTSRLFGEGCLLILNLGAIVAELRALLDLEETTG
SIO_010081: ADEG_RS10915
subclass of: SO_0000673
so part of: ADEG_RS10915
location: 8246..8866
location: region:8246-8866:1
so has part: feature:8246-8866:1:exon

WP_012818240.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:8246-8866:1:exon

ADEG_RS10920
type: Gene
subclass of: SO_0000704
RO_0002162: 429009
gene: iscB
locus tag: ADEG_RS10920
old locus tag: Adeg_2160
so part of: sequence
location: 9671..11050
location: region:9671-11050:1
so has part: feature:9671-11050:1:exon
subclass of: SO_0000010

position:9671:1
position: 9671
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:11050:1
position: 11050
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9671-11050:1:exon

ADEG_RS10920
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 429009
gene: iscB
locus tag: ADEG_RS10920
old locus tag: Adeg_2160
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012818242.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: RNA-guided endonuclease IscB
translation: MVFVLDRKGRPLMPCSERRARKLLEQGRAVVVRLEPFVIRLKDRVAEEASLQPLRLKIDPGYEVTGISVVRVAGGKEVVVFFAEVHHRTDVPGKLLSRRQARRSRRSRKTRYREPRFDNRGRPEGWLPPGAVARVNQVLSVVGKLVRWLPVTEIVVESAKFDTQKLQNPEVSGVEYQRGELQGYEVREYLLEKYGRKCAYCGKENVPLEVDHVVPKSRGGTDRVSNLTLACRECNRAKGNKLPQEWLEELKNSGRAVDRKRAENIPKVLARLKEPLKAAACMNATRYVLVERLRALGPPVLTATAAQTKYNRARFNLPKTHYFDACCVGEVSGELEVAAGYVQVFRAVGRGTRQMANLDRHGFPRGHRARGKIHSGFMTGDLAVAEVPAGRYAGRYVGYVAVRRSGYFDLKDLSGRRVCQGIAFRHFKLVQRFDGWRYEKFKIAALSSPHLKVGASSAA
SIO_010081: ADEG_RS10920
subclass of: SO_0000673
so part of: ADEG_RS10920
location: 9671..11050
location: region:9671-11050:1
so has part: feature:9671-11050:1:exon

WP_012818242.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:9671-11050:1:exon

ADEG_RS10925
type: Gene
subclass of: SO_0000704
RO_0002162: 429009
locus tag: ADEG_RS10925
old locus tag: Adeg_2161
so part of: sequence
location: 11065..12546
location: region:11065-12546:1
so has part: feature:11065-12546:1:exon
subclass of: SO_0000010

position:11065:1
position: 11065
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:12546:1
position: 12546
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11065-12546:1:exon

ADEG_RS10925
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 429009
locus tag: ADEG_RS10925
old locus tag: Adeg_2161
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012818243.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: transposase
translation: MKFKTRKPADTITVPARMYPDEAAEKKLVSFMRRFQAAKRTAYQALRRGKEPEEIVKDLYRKFFPNARWCQWAVEDAKATCDAQKEQVRMHVSDLEAKIEKSEEKLKRTKNELHRRGILARIAKLCAKLEYWKGFLERDEVPPAVFGGKKNLLLLQEGKLSKEEWRELRSNAFYSVGQANQKGLEGQYGNANTEIVHDEVTDSFRLNVYVPPEPGDKSGRLRQDEDWVTVPLEVPARYRPLLLKCLAEGRAYTVRVVRRNGRFDCLVSFSLGDTAEVDRTSPMAGFDLNPDVVAVTVVLPDGNFKVSRLFWCHDLVHASHEKREWIAGNLAKEVADWLESLGVKQVALEELSFAQDHDTDRAFNRITHNFCKKLLFNRTVVALRKRGIAVFTVPAHFTSLIGFFKYSETYGLNTHQAAALVIARRALGFKERVPKALVQKLLRRPPMEGWTHGKLWGRLSGMFKAARKKVSRYFNTRAFTPSAWLEHIFAGAG
SIO_010081: ADEG_RS10925
subclass of: SO_0000673
so part of: ADEG_RS10925
location: 11065..12546
location: region:11065-12546:1
so has part: feature:11065-12546:1:exon

WP_012818243.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:11065-12546:1:exon

ADEG_RS12060
type: Gene
subclass of: SO_0000704
RO_0002162: 429009
locus tag: ADEG_RS12060
so part of: sequence
location: complement(12543..12710)
location: region:12543-12710:-1
so has part: feature:12543-12710:-1:exon
subclass of: SO_0000010

position:12543:-1
position: 12543
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:12710:-1
position: 12710
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:12543-12710:-1:exon

ADEG_RS12060
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 429009
locus tag: ADEG_RS12060
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MGYGEVPAGGTRPQARTGRGSHPTYPPPLYPHRTVLPEPRAAPAGKDGGLKENGL
SIO_010081: ADEG_RS12060
subclass of: SO_0000673
so part of: ADEG_RS12060
location: complement(12543..12710)
location: region:12543-12710:-1
so has part: feature:12543-12710:-1:exon

WP_156779972.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:12543-12710:-1:exon

ADEG_RS10930
type: Gene
subclass of: SO_0000704
RO_0002162: 429009
locus tag: ADEG_RS10930
old locus tag: Adeg_2162
so part of: sequence
location: complement(12918..13208)
location: region:12918-13208:-1
so has part: feature:12918-13208:-1:exon
subclass of: SO_0000010

position:12918:-1
position: 12918
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:13208:-1
position: 13208
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:12918-13208:-1:exon

ADEG_RS10930
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 429009
locus tag: ADEG_RS10930
old locus tag: Adeg_2162
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011928453.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: AbrB/MazE/SpoVT family DNA-binding domain-containing protein
translation: MQTFEPVRVGKRGTVTIPAALRQKYRLGEGSWLVLEPREEGILLRPACVCPVEVYTPERKAEFLLNNAVTPEDYAWAVEEVRKMGLEVNFPYTKQS
SIO_010081: ADEG_RS10930
subclass of: SO_0000673
so part of: ADEG_RS10930
location: complement(12918..13208)
location: region:12918-13208:-1
so has part: feature:12918-13208:-1:exon

WP_012818244.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:12918-13208:-1:exon

ADEG_RS10935
type: Gene
subclass of: SO_0000704
RO_0002162: 429009
locus tag: ADEG_RS10935
old locus tag: Adeg_2163
so part of: sequence
location: complement(13278..14180)
location: region:13278-14180:-1
so has part: feature:13278-14180:-1:exon
subclass of: SO_0000010

position:13278:-1
position: 13278
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:14180:-1
position: 14180
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:13278-14180:-1:exon

ADEG_RS10935
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 429009
locus tag: ADEG_RS10935
old locus tag: Adeg_2163
inference: COORDINATES: protein motif:HMM:NF012798.2
GO function: GO:0003677 - DNA binding [Evidence IEA]
GO process: GO:0015074 - DNA integration [Evidence IEA]; GO:0006310 - DNA recombination [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: tyrosine-type recombinase/integrase
translation: MPRKPSLFHLFRLRAESLLRVGEKKHEVKKVAEEEAVRMGLCGKERVEFVRRKTLCAGIFSFRTLRACLQVAGVFCGWLKTRHPEKVKEAREKGDIEVVKPYVSEFFIYRRDAGYSPYTLKKERSLLRKLFLDPELASEVELPSRRLEDRKPLKEAEVPERYQDLVDFCRATGLRRVELRRVRLEDVQEKDGGLVVYVRRGKGGKARWVRVRRDMERRVREIVAEAKKQGKERLFPRIPGWLGVKVYRREYAWVRLEEEMERLKEENPGLRTRDLRKMAKLEVSRDLGHNRTDVMSCYLE
SIO_010081: ADEG_RS10935
subclass of: SO_0000673
so part of: ADEG_RS10935
location: complement(13278..14180)
location: region:13278-14180:-1
so has part: feature:13278-14180:-1:exon

WP_012818245.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:13278-14180:-1:exon

ADEG_RS10940
type: Gene
subclass of: SO_0000704
RO_0002162: 429009
locus tag: ADEG_RS10940
old locus tag: Adeg_2164
so part of: sequence
location: complement(15086..15325)
location: region:15086-15325:-1
so has part: feature:15086-15325:-1:exon
subclass of: SO_0000010

position:15086:-1
position: 15086
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:15325:-1
position: 15325
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:15086-15325:-1:exon

ADEG_RS10940
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 429009
locus tag: ADEG_RS10940
old locus tag: Adeg_2164
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MAGKKEHPYKPHHWDADVLREAKYFEVVLESGERFKAKLLGINEYNMLLETEEARIFLPKHSIRYVVLERFVEEEDDEA
SIO_010081: ADEG_RS10940
subclass of: SO_0000673
so part of: ADEG_RS10940
location: complement(15086..15325)
location: region:15086-15325:-1
so has part: feature:15086-15325:-1:exon

WP_012818246.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:15086-15325:-1:exon

ADEG_RS10945
type: Gene
subclass of: SO_0000704
RO_0002162: 429009
locus tag: ADEG_RS10945
old locus tag: Adeg_2165
so part of: sequence
location: complement(15564..16931)
location: region:15564-16931:-1
so has part: feature:15564-16931:-1:exon
subclass of: SO_0000010

position:15564:-1
position: 15564
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:16931:-1
position: 16931
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:15564-16931:-1:exon

ADEG_RS10945
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 429009
locus tag: ADEG_RS10945
old locus tag: Adeg_2165
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MGRVKKRKNSSKTLHEAAVVRESDSRLILSPSQHTRLLHGSEKARGYVFVAYADGGRWREQAVRVADIPYVVEEFAGRADVYLTQNRFYGRRRRIVWLGQLGANFVDLDYHKTEYADRDPYTVLERALDLLAERGLPPPAFVVFSGRGLQLVWLHTPVPRRALPRWNAVQTELCQALEELGADYAARDATRVLRLVDTVNSRSGKRVFGEIISGHVWPFDRLADEVLPLTRAEIYDLRIRRALKGRRVVVPPGDFSAATLWEARLSDLMKLLELRGQKKLPPGQRDHWLFLAGVAMSWLAVSFESFYRELVTLAQMVGSWTERESRSRFHALYRRLRMYFAGERIEYNGVPIDPRYRFRNETIIEWLRITPEEQRQLSTIWSEEVRREKDRQRHEEARREAGMVPREEYLARAEERRRKALELWEQGLTQKKIAEILGVTQQAVSEMLREKKDTP
SIO_010081: ADEG_RS10945
subclass of: SO_0000673
so part of: ADEG_RS10945
location: complement(15564..16931)
location: region:15564-16931:-1
so has part: feature:15564-16931:-1:exon

WP_169302586.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:15564-16931:-1:exon

ADEG_RS11515
type: Gene
subclass of: SO_0000704
RO_0002162: 429009
locus tag: ADEG_RS11515
old locus tag: Adeg_2166
so part of: sequence
location: complement(17136..17525)
location: region:17136-17525:-1
so has part: feature:17136-17525:-1:exon
subclass of: SO_0000010

position:17136:-1
position: 17136
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:17525:-1
position: 17525
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:17136-17525:-1:exon

ADEG_RS11515
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 429009
locus tag: ADEG_RS11515
old locus tag: Adeg_2166
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MRVRLVVLRDPGKVWRVVRSLRRLVDRYREDLLPSEFWREGTYLPFPRYPNAYLLILWPPGGTDPVALARRVARLLEKRAGVVLDWAAGIRKSGAVWLLVKARAYKEPDLKVVRYGVQADDLRAIRRLV
SIO_010081: ADEG_RS11515
subclass of: SO_0000673
so part of: ADEG_RS11515
location: complement(17136..17525)
location: region:17136-17525:-1
so has part: feature:17136-17525:-1:exon

WP_156779973.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:17136-17525:-1:exon

ADEG_RS10955
type: Gene
subclass of: SO_0000704
RO_0002162: 429009
locus tag: ADEG_RS10955
old locus tag: Adeg_2167
so part of: sequence
location: complement(17522..17839)
location: region:17522-17839:-1
so has part: feature:17522-17839:-1:exon
subclass of: SO_0000010

position:17522:-1
position: 17522
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:17839:-1
position: 17839
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:17522-17839:-1:exon

ADEG_RS10955
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 429009
locus tag: ADEG_RS10955
old locus tag: Adeg_2167
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: CopG family transcriptional regulator
translation: MVRERKTIVSVRLPEDLVKWLRRKAAEGHTTVSSIVVSALREKRDYELAETFARAALKAACALLSLTGRDPSQVDWGKVRSWEVEVASRAAAQAKALRGEGEKGT
SIO_010081: ADEG_RS10955
subclass of: SO_0000673
so part of: ADEG_RS10955
location: complement(17522..17839)
location: region:17522-17839:-1
so has part: feature:17522-17839:-1:exon

WP_012818249.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:17522-17839:-1:exon

ADEG_RS10960
type: Gene
subclass of: SO_0000704
RO_0002162: 429009
locus tag: ADEG_RS10960
old locus tag: Adeg_2168
so part of: sequence
location: complement(18237..18920)
location: region:18237-18920:-1
so has part: feature:18237-18920:-1:exon
subclass of: SO_0000010

position:18237:-1
position: 18237
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:18920:-1
position: 18920
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:18237-18920:-1:exon

ADEG_RS10960
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 429009
locus tag: ADEG_RS10960
old locus tag: Adeg_2168
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MSEESRRRFEVSLSPFLLVFLGLLLSAAGGFLAGDFVSHISDVEIRLTWWMRLAAVAVLFSFAYVFVYLLPVESLPVSRSPNPPRSRLHFLQQIAAVRYMSLLCLFVLPEAVISAAVGDVPPVQALIRFGLGFPIFAVPGTIWMVMSDLSPSFHKVQYRHLIISGAAGFLVAFVASVSVALSGSAELTDDLVYCLALDLVAVPYFIEAGYRSARKDWVKKEVTAGGS
SIO_010081: ADEG_RS10960
subclass of: SO_0000673
so part of: ADEG_RS10960
location: complement(18237..18920)
location: region:18237-18920:-1
so has part: feature:18237-18920:-1:exon

WP_012818250.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:18237-18920:-1:exon

ADEG_RS10965
type: Gene
subclass of: SO_0000704
RO_0002162: 429009
locus tag: ADEG_RS10965
old locus tag: Adeg_2169
so part of: sequence
location: complement(18924..19628)
location: region:18924-19628:-1
so has part: feature:18924-19628:-1:exon
subclass of: SO_0000010

position:18924:-1
position: 18924
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:19628:-1
position: 19628
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:18924-19628:-1:exon

ADEG_RS10965
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 429009
locus tag: ADEG_RS10965
old locus tag: Adeg_2169
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MKVVEGKRISLSPLLLVFLGLLLSAAGGFLAGDFVSHISDVEIRFGWWWKLSGLGFFLASHYVSEFLLPVESLPIKNLAGPPRSRVEFLKHIALAKQVLFVCALMLPGLTISIVVGGVPAVSAVSCLPAMVTVALMACTWGTAVDLNPTFAEKAWGCVLIIGGLGIVFLSGMLILIFTLAIPEVGNFVCETEAGNAILLSLLMGAGFLYFLEVSYRSLRKSLAETNDQQRLGGI
SIO_010081: ADEG_RS10965
subclass of: SO_0000673
so part of: ADEG_RS10965
location: complement(18924..19628)
location: region:18924-19628:-1
so has part: feature:18924-19628:-1:exon

WP_156779974.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:18924-19628:-1:exon

ADEG_RS10970
type: Gene
subclass of: SO_0000704
RO_0002162: 429009
locus tag: ADEG_RS10970
old locus tag: Adeg_2170
so part of: sequence
location: complement(19636..19953)
location: region:19636-19953:-1
so has part: feature:19636-19953:-1:exon
subclass of: SO_0000010

position:19636:-1
position: 19636
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:19953:-1
position: 19953
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:19636-19953:-1:exon

ADEG_RS10970
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 429009
locus tag: ADEG_RS10970
old locus tag: Adeg_2170
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MNWGSVKRFGYACWEGAKEVARGYDPRTWGTWDQKEAAINVAKDYALNKAARYHELVKAGAAVGKVGRFASKVIPGVGVVSLGIDVATFIRGAVRGWQAYGVNHR
SIO_010081: ADEG_RS10970
subclass of: SO_0000673
so part of: ADEG_RS10970
location: complement(19636..19953)
location: region:19636-19953:-1
so has part: feature:19636-19953:-1:exon

WP_012818252.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:19636-19953:-1:exon

ADEG_RS10975
type: Gene
subclass of: SO_0000704
RO_0002162: 429009
locus tag: ADEG_RS10975
old locus tag: Adeg_2171
so part of: sequence
location: complement(19940..20590)
location: region:19940-20590:-1
so has part: feature:19940-20590:-1:exon
subclass of: SO_0000010

position:19940:-1
position: 19940
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:20590:-1
position: 20590
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:19940-20590:-1:exon

ADEG_RS10975
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 429009
locus tag: ADEG_RS10975
old locus tag: Adeg_2171
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MRVYFPVGQSEVLEISWGDEKHEVTIAPPDGGLDLSPFRIPPRAPFTVSKAGGRLLTTTKEDLCVLDSTVELVRSSLCLDIQVGEESLYPVSPTTTFYADDIQMVVFAELAGVCRPLPMLVSWWYRKRPYFVTVGEIPPLPQESETTSLVRSCAFGFFIDPALPKGTWEVRLDLPTGRNLCRIEVRLLEGKRPHLGESGTLFRPKPEGGRMLDELG
SIO_010081: ADEG_RS10975
subclass of: SO_0000673
so part of: ADEG_RS10975
location: complement(19940..20590)
location: region:19940-20590:-1
so has part: feature:19940-20590:-1:exon

WP_012818253.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:19940-20590:-1:exon

ADEG_RS10985
type: Gene
subclass of: SO_0000704
RO_0002162: 429009
locus tag: ADEG_RS10985
old locus tag: Adeg_2172
so part of: sequence
location: complement(21422..22729)
location: region:21422-22729:-1
so has part: feature:21422-22729:-1:exon
subclass of: SO_0000010

position:21422:-1
position: 21422
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:22729:-1
position: 22729
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:21422-22729:-1:exon

ADEG_RS10985
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 429009
locus tag: ADEG_RS10985
old locus tag: Adeg_2172
inference: COORDINATES: protein motif:HMM:NF024776.2
GO function: GO:0003677 - DNA binding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: helix-turn-helix domain-containing protein
translation: MKKQKNSPKTLHEAAVGQRNGSCLILSPLEHARPLQGGASELQRRFEEKNALLGQRFVQVSPEEYLSRIFGEKEVLVVVLGSTEGERGTVIRVPYTEVWQLAWRDNAYIPYADFHRNYYHSRTLKSVRAFVVDVDGADAVELEKLMRYVWGVLPAEPSYVVNSGVGVHFVYALSRPVEVQGLRYALNELNRRIQEAFAGIGRLDKHPLVHPYRWPGFRTKIGTTATAFQAHGHYDIEELLEVFGVKADKPVRKRKEQGVLYLPRGKRAFFEWVLRRLFRNPPIPGRRHNSFFALGIIAYKCKREVPREEAREAVEMVYCDIVRYRMDAGFSLEEAYEAFEKGYNPKAVTVTWKYLCELLGWEYMPNKRNKRSRQDHLKYMSAIRKAKVDFRRNELLPRVVRLRAEGRSLREIAREVGVSKNTVARWLNNLSVPHH
SIO_010081: ADEG_RS10985
subclass of: SO_0000673
so part of: ADEG_RS10985
location: complement(21422..22729)
location: region:21422-22729:-1
so has part: feature:21422-22729:-1:exon

WP_012818254.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:21422-22729:-1:exon

ADEG_RS10990
type: Gene
subclass of: SO_0000704
RO_0002162: 429009
locus tag: ADEG_RS10990
old locus tag: Adeg_2173
so part of: sequence
location: complement(22958..23281)
location: region:22958-23281:-1
so has part: feature:22958-23281:-1:exon
subclass of: SO_0000010

position:22958:-1
position: 22958
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:23281:-1
position: 23281
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:22958-23281:-1:exon

ADEG_RS10990
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 429009
locus tag: ADEG_RS10990
old locus tag: Adeg_2173
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012302603.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: CopG family antitoxin
translation: MRKKKELPEFKGDRIPEFASEEEEREFWDGYSFAEAMERGVLEPVEEPVELAPELAEKMKTKRVTLRLRVSQIEAAKRIAKEKDIPYQTLLRSWIAEAIRREQEKRA
SIO_010081: ADEG_RS10990
subclass of: SO_0000673
so part of: ADEG_RS10990
location: complement(22958..23281)
location: region:22958-23281:-1
so has part: feature:22958-23281:-1:exon

WP_012818255.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:22958-23281:-1:exon

ADEG_RS11520
type: Gene
subclass of: SO_0000704
RO_0002162: 429009
locus tag: ADEG_RS11520
old locus tag: Adeg_2175
so part of: sequence
location: complement(23665..24102)
location: region:23665-24102:-1
so has part: feature:23665-24102:-1:exon
subclass of: SO_0000010

position:23665:-1
position: 23665
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:24102:-1
position: 24102
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:23665-24102:-1:exon

ADEG_RS11520
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 429009
locus tag: ADEG_RS11520
old locus tag: Adeg_2175
inference: COORDINATES: protein motif:HMM:TIGR01764.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: helix-turn-helix domain-containing protein
translation: MDNDQGLPLKEAAQALGISEKTLRRWIRAGKIPARLVDGPFGQEYRIPREAVNTAQQVVDVVKVERPTDPGQLAMAVSSALSRALEERDRRFAEELAEIRQQLAELLEVQRRAAEREEERIRRLEEVLSELRSRRRRPWWKFWGR
SIO_010081: ADEG_RS11520
subclass of: SO_0000673
so part of: ADEG_RS11520
location: complement(23665..24102)
location: region:23665-24102:-1
so has part: feature:23665-24102:-1:exon

WP_012818256.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:23665-24102:-1:exon

ADEG_RS11010
type: Gene
subclass of: SO_0000704
RO_0002162: 429009
locus tag: ADEG_RS11010
old locus tag: Adeg_2177
so part of: sequence
location: 24630..25496
location: region:24630-25496:1
so has part: feature:24630-25496:1:exon
subclass of: SO_0000010

position:24630:1
position: 24630
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:25496:1
position: 25496
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:24630-25496:1:exon

ADEG_RS11010
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 429009
locus tag: ADEG_RS11010
old locus tag: Adeg_2177
inference: COORDINATES: protein motif:HMM:NF020419.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: nucleotidyl transferase AbiEii/AbiGii toxin family protein
translation: MQWEEITRKAYTLGTTPEFVFREETQKAVLSFLSRKSFFREGVFQGGTALRLFYGAPRFSEDLDFVFVAKNSGTWQNTGRLLQGLEAYLLGVFPFPLEVTAKKQKESETLKRFSLRATGGPLSRKVVVNIEFANVPSYMHRVAHLEFPPFNPMIRVEAPEEILADKVVACALRAYIKGRDLWDIRYLTLEKGLILPVKLVAQKARDYGSTARELAEKLKKAAEKVREEGRESILNEMPRFLAKHEAELLPAQASEAAIGVASLLEEAAKKVAFHADDGVVPPFPGEQL
SIO_010081: ADEG_RS11010
subclass of: SO_0000673
so part of: ADEG_RS11010
location: 24630..25496
location: region:24630-25496:1
so has part: feature:24630-25496:1:exon

WP_012818258.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:24630-25496:1:exon

ADEG_RS11015
type: Gene
subclass of: SO_0000704
RO_0002162: 429009
locus tag: ADEG_RS11015
old locus tag: Adeg_2178
so part of: sequence
location: 25456..26079
location: region:25456-26079:1
so has part: feature:25456-26079:1:exon
subclass of: SO_0000010

position:25456:1
position: 25456
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:26079:1
position: 26079
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:25456-26079:1:exon

ADEG_RS11015
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 429009
locus tag: ADEG_RS11015
old locus tag: Adeg_2178
inference: COORDINATES: protein motif:HMM:NF024734.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: type IV toxin-antitoxin system AbiEi family antitoxin domain-containing protein
translation: MTEWYRLFQENSFKKVFTFDDLHVLTGLPTRELKVELSRLVKRGLAERLAKGVYANPFNYPSPAEIAMVLRPPCYISMEHCLSEEGILSQHSFTVTCVTLGTPGTVRTSRTIFEYHRIARRLFWGWREDGQGVRWAWPEKALLDLIYIRHLRTRELSRERLLSLLDDMYLGELNGERLVEFLSRFGSPHAEKIADILTEAGLTISPS
SIO_010081: ADEG_RS11015
subclass of: SO_0000673
so part of: ADEG_RS11015
location: 25456..26079
location: region:25456-26079:1
so has part: feature:25456-26079:1:exon

WP_169302587.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:25456-26079:1:exon

ADEG_RS11020
type: Gene
subclass of: SO_0000704
RO_0002162: 429009
locus tag: ADEG_RS11020
old locus tag: Adeg_2179
so part of: sequence
location: complement(26066..26932)
location: region:26066-26932:-1
so has part: feature:26066-26932:-1:exon
subclass of: SO_0000010

position:26066:-1
position: 26066
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:26932:-1
position: 26932
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:26066-26932:-1:exon

ADEG_RS11020
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 429009
locus tag: ADEG_RS11020
old locus tag: Adeg_2179
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013822664.1
GO function: GO:0003677 - DNA binding [Evidence IEA]
GO process: GO:0015074 - DNA integration [Evidence IEA]; GO:0006310 - DNA recombination [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: tyrosine-type recombinase/integrase
translation: MSDWLSGFEVSCLRRGLSPSSVRAYLGVVRRFVAWWEGTSGEAFDPRAVTPLDVADYRRYLRGRGLKPATVNFNLEAVKSFFRWLKEERALPDNPAEGVKKVPEVKPSPRWLTRREVGLLARAVQRYGTVKDRALFALLLHAGLRVSEAVSLRLEDVVVRERSGFVRVRYGKGGKYREVPLNVTVRRVLKEYLAELPPQGGGWLFPGKKGPMTPRAVQKRLKFFGRIAGVEVTPHKLRHTFCKWLIDAGESLDKVALLAGHARLDTTAVYTRPGRTDLERAVEKLSWD
SIO_010081: ADEG_RS11020
subclass of: SO_0000673
so part of: ADEG_RS11020
location: complement(26066..26932)
location: region:26066-26932:-1
so has part: feature:26066-26932:-1:exon

WP_012818260.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:26066-26932:-1:exon

ADEG_RS11025
type: Gene
subclass of: SO_0000704
RO_0002162: 429009
locus tag: ADEG_RS11025
old locus tag: Adeg_2180
so part of: sequence
location: complement(26960..27382)
location: region:26960-27382:-1
so has part: feature:26960-27382:-1:exon
subclass of: SO_0000010

position:26960:-1
position: 26960
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:27382:-1
position: 27382
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:26960-27382:-1:exon

ADEG_RS11025
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 429009
locus tag: ADEG_RS11025
old locus tag: Adeg_2180
inference: COORDINATES: similar to AA sequence:RefSeq:WP_004399083.1
GO function: GO:0004521 - endoribonuclease activity [Evidence IEA]; GO:0005515 - protein binding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: putative toxin-antitoxin system toxin component, PIN family
translation: MRAVIDTSVLVSAFLSKRSHPAKVLDAWILGRFTPVVSPELVREYAAVLVRDKFAVLGSVADRINLLEEILALPWVVMVHPKEKISVVQKDPEDDKVLECAVEGRAGWVVTGDKHLLELRSVRGVAIVTAEEFLRALGKG
SIO_010081: ADEG_RS11025
subclass of: SO_0000673
so part of: ADEG_RS11025
location: complement(26960..27382)
location: region:26960-27382:-1
so has part: feature:26960-27382:-1:exon

WP_012818261.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:26960-27382:-1:exon

ADEG_RS11030
type: Gene
subclass of: SO_0000704
RO_0002162: 429009
locus tag: ADEG_RS11030
old locus tag: Adeg_2181
so part of: sequence
location: complement(27370..27651)
location: region:27370-27651:-1
so has part: feature:27370-27651:-1:exon
subclass of: SO_0000010

position:27370:-1
position: 27370
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:27651:-1
position: 27651
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:27370-27651:-1:exon

ADEG_RS11030
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 429009
locus tag: ADEG_RS11030
old locus tag: Adeg_2181
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011928482.1
GO component: GO:0110001 - toxin-antitoxin complex [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: type II toxin-antitoxin system Phd/YefM family antitoxin
translation: MERIIGVDQLRPRLGEYVERAEGGEVWIIALRSKPRGVLIGYSRYEELKRLAERAKQLELKIALDEMRQRGEEAGLTEEDVLKEIEEVRKCGR
SIO_010081: ADEG_RS11030
subclass of: SO_0000673
so part of: ADEG_RS11030
location: complement(27370..27651)
location: region:27370-27651:-1
so has part: feature:27370-27651:-1:exon

WP_012818262.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:27370-27651:-1:exon