Ammonifex degensii KC4, complete sequence.
Bacteria; Bacillota; Clostridia; Thermoanaerobacterales; Thermoanaerobacteraceae; Ammonifex.
Complete sequence of chromosome of Ammonifex degensii KC4
Submitted (02-OCT-2009) US DOE Joint Genome Institute, 2800 Mitchell Drive B310, Walnut Creek, CA 94598-1698, USA
REFSEQ INFORMATION: The reference sequence is identical to\nCP001785.1.\nURL -- http://www.jgi.doe.gov\nJGI Project ID: 4003801\nSource DNA available from DSMZ: DSM 10501 (http://www.dsmz.de)\nContacts: Cheryl Kerfeld (CKerfeld@lbl.gov)\n David Bruce (microbe@cuba.jgi-psf.org)\nAnnotation done by JGI-ORNL and JGI-PGF\nUCLA undergraduates in LS187 contributed to the sequencing and\nanalysis of this genome.\nAlso, students and faculty at the following schools participated in\nanalysis of the A. degensii genome: Austin College (Professor\nKelynne Reed); Bowling Green State University (Professor Zhaohui\nXu); University of Missouri-Columbia, Professor Sharyn Freyermuth);\nThe University of St. Thomas (Professor Jayna L. Ditty); St. Cloud\nState University (Professor Christopher Kvaal); University of\nNebraska (Professor Cheryl Bailey); University of Southern\nMississippi (Professor Sabine Heinhorst); (University of South\nFlorida (Professor Kathleen Scott); Michigan State University\n(Professor Robert Britton); University of California, Los Angeles\n(Professor Erin Sanders-Lorenz); Northern Illinois University\n(Professor Rick Johns); Hiram College (Professors Stuart Gordon and\nBrad Goodner)\nFinishing done by JGI-LANL\nFinished microbial genomes have been curated to close all gaps with\ngreater than 98% coverage of at least two independent clones. Each\nbase pair has a minimum q (quality) value of 30 and the total error\nrate is less than one per 50000.\nThe JGI and collaborators endorse the principles for the\ndistribution and use of large scale sequencing data adopted by the\nlarger genome sequencing community and urge users of this data to\nfollow them. it is our intention to publish the work of this\nproject in a timely fashion and we welcome collaborative\ninteraction on the project and analysis.\n(http://www.genome.gov/page.cfm?pageID=10506376).\nThe annotation was added by the NCBI Prokaryotic Genome Annotation\nPipeline (PGAP). Information about PGAP can be found here:\nhttps://www.ncbi.nlm.nih.gov/genome/annotation_prok/\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI RefSeq\nAnnotation Date :: 04/09/2023 08:54:26\nAnnotation Pipeline :: NCBI Prokaryotic Genome\n Annotation Pipeline (PGAP)\nAnnotation Method :: Best-placed reference protein\n set; GeneMarkS-2+\nAnnotation Software revision :: 6.5\nFeatures Annotated :: Gene; CDS; rRNA; tRNA; ncRNA\nGenes (total) :: 2,250\nCDSs (total) :: 2,193\nGenes (coding) :: 2,158\nCDSs (with protein) :: 2,158\nGenes (RNA) :: 57\nrRNAs :: 2, 2, 2 (5S, 16S, 23S)\ncomplete rRNAs :: 2, 2, 2 (5S, 16S, 23S)\ntRNAs :: 47\nncRNAs :: 4\nPseudo Genes (total) :: 35\nCDSs (without protein) :: 35\nPseudo Genes (ambiguous residues) :: 0 of 35\nPseudo Genes (frameshifted) :: 13 of 35\nPseudo Genes (incomplete) :: 24 of 35\nPseudo Genes (internal stop) :: 3 of 35\nPseudo Genes (multiple problems) :: 5 of 35\nCRISPR Arrays :: 8\n##Genome-Annotation-Data-END##\n\n##Metadata-START##\nOrganism Display Name :: Ammonifex degensii KC4\nCulture Collection ID :: DSM 10501\nGOLD Stamp ID :: Gi00784\nGreengenes ID :: 13731\nIsolation Site :: Neutral volcanic hot spring\nOxygen Requirement :: Anaerobe\nCell Shape :: Rod-shaped\nMotility :: Motile\nTemperature Range :: Thermophile\nTemperature Optimum :: 70C\nGram Staining :: gram-\nBiotic Relationship :: Free living\nDiseases :: None\nHabitat :: Fresh water, Hot spring\nEnergy Source :: Chemolithoautotroph\n##Metadata-END##\nCOMPLETENESS: full length.
COORDINATES: similar to AA sequence:RefSeq:WP_011345563.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0003677 - DNA binding [Evidence IEA]; GO:0003688 - DNA replication origin binding [Evidence IEA]
GO:0006270 - DNA replication initiation [Evidence IEA]; GO:0006275 - regulation of DNA replication [Evidence IEA]
Derived by automated computational analysis using gene prediction method: Protein Homology.
chromosomal replication initiator protein DnaA
COORDINATES: similar to AA sequence:RefSeq:WP_015738714.1
GO:0009360 - DNA polymerase III complex [Evidence IEA]
GO:0003887 - DNA-directed DNA polymerase activity [Evidence IEA]
GO:0006260 - DNA replication [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00611.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0003697 - single-stranded DNA binding [Evidence IEA]
GO:0006310 - DNA recombination [Evidence IEA]; GO:0006281 - DNA repair [Evidence IEA]; GO:0006260 - DNA replication [Evidence IEA]; GO:0009432 - SOS response [Evidence IEA]
All proteins in this family for which functions are known are DNA-binding proteins that assist the filamentation of RecA onto DNA for the initiation of recombination or recombinational repair; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: protein motif:HMM:NF015958.2
COORDINATES: similar to AA sequence:RefSeq:WP_011024546.1
GO:0009330 - DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) complex [Evidence IEA]
GO:0003918 - DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) activity [Evidence IEA]
GO:0006265 - DNA topological change [Evidence IEA]
DNA topoisomerase (ATP-hydrolyzing) subunit B
COORDINATES: similar to AA sequence:RefSeq:WP_015049187.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0003677 - DNA binding [Evidence IEA]; GO:0003916 - DNA topoisomerase activity [Evidence IEA]; GO:0003918 - DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) activity [Evidence IEA]
GO:0006259 - DNA metabolic process [Evidence IEA]; GO:0006265 - DNA topological change [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011345556.1
GO:0003824 - catalytic activity [Evidence IEA]
GO:0042823 - pyridoxal phosphate biosynthetic process [Evidence IEA]
pyridoxal 5'-phosphate synthase lyase subunit PdxS
COORDINATES: similar to AA sequence:RefSeq:WP_013781850.1
GO:0016884 - carbon-nitrogen ligase activity, with glutamine as amido-N-donor [Evidence IEA]
pyridoxal 5'-phosphate synthase glutaminase subunit PdxT
COORDINATES: similar to AA sequence:RefSeq:WP_011345552.1
alanine--glyoxylate aminotransferase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_011345551.1
GO:0004617 - phosphoglycerate dehydrogenase activity [Evidence IEA]
GO:0006564 - L-serine biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_009609894.1
GO:0004828 - serine-tRNA ligase activity [Evidence IEA]
GO:0006434 - seryl-tRNA aminoacylation [Evidence IEA]
Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
COORDINATES: protein motif:HMM:NF012798.2
GO:0015074 - DNA integration [Evidence IEA]; GO:0006310 - DNA recombination [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_015739950.1
helix-turn-helix transcriptional regulator
COORDINATES: similar to AA sequence:RefSeq:WP_015739951.1
COORDINATES: ab initio prediction:GeneMarkS-2+
Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
COORDINATES: similar to AA sequence:RefSeq:WP_015738446.1
COORDINATES: protein motif:HMM:NF024949.2
helix-turn-helix domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_015738444.1
COORDINATES: protein motif:HMM:NF013930.2
GO:0003677 - DNA binding [Evidence IEA]; GO:0003896 - DNA primase activity [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA]
CHC2 zinc finger domain-containing protein
COORDINATES: protein motif:HMM:NF024139.2
COORDINATES: protein motif:HMM:NF013962.2
COORDINATES: similar to AA sequence:RefSeq:WP_015051836.1
COORDINATES: similar to AA sequence:RefSeq:WP_011345493.1
GO:0051539 - 4 iron, 4 sulfur cluster binding [Evidence IEA]; GO:1904047 - S-adenosyl-L-methionine binding [Evidence IEA]
GO:0031179 - peptide modification [Evidence IEA]
thioether cross-link-forming SCIFF peptide maturase
COORDINATES: protein motif:HMM:NF013700.2
COORDINATES: protein motif:HMM:NF024764.2
COORDINATES: similar to AA sequence:RefSeq:WP_011345275.1
COORDINATES: protein motif:HMM:NF014695.2
respiratory nitrate reductase subunit gamma
COORDINATES: protein motif:HMM:NF014774.2
GO:0051536 - iron-sulfur cluster binding [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011345272.1
TusE/DsrC/DsvC family sulfur relay protein
COORDINATES: protein motif:HMM:TIGR00379.1
GO:0042242 - cobyrinic acid a,c-diamide synthase activity [Evidence IEA]
GO:0009236 - cobalamin biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF015077.2
GO:0010038 - response to metal ion [Evidence IEA]
COORDINATES: protein motif:HMM:NF008629.1
GO:0004519 - endonuclease activity [Evidence IEA]
cleaves DNA at apurinic or apyrimidinic sites; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_013755695.1
COORDINATES: protein motif:HMM:NF017020.2
COORDINATES: protein motif:HMM:NF014021.2
GO:0046872 - metal ion binding [Evidence IEA]; GO:0016779 - nucleotidyltransferase activity [Evidence IEA]
nucleotidyltransferase domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_013786989.1
GO:0009847 - spore germination [Evidence IEA]
COORDINATES: protein motif:HMM:NF025971.2
COORDINATES: protein motif:HMM:NF019450.2
copper amine oxidase N-terminal domain-containing protein
COORDINATES: protein motif:HMM:NF014385.2
GO:0015562 - efflux transmembrane transporter activity [Evidence IEA]
GO:0055085 - transmembrane transport [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_015738539.1
GO:0004803 - transposase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_003867108.1
Lrp/AsnC family transcriptional regulator
COORDINATES: similar to AA sequence:RefSeq:WP_011343063.1
GO:0030170 - pyridoxal phosphate binding [Evidence IEA]
GO:0009058 - biosynthetic process [Evidence IEA]
aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme
COORDINATES: similar to AA sequence:RefSeq:WP_011343071.1
COORDINATES: protein motif:HMM:TIGR00456.1
GO:0004814 - arginine-tRNA ligase activity [Evidence IEA]
GO:0006420 - arginyl-tRNA aminoacylation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012268893.1
GO:0003883 - CTP synthase activity [Evidence IEA]
GO:0006241 - CTP biosynthetic process [Evidence IEA]; GO:0006221 - pyrimidine nucleotide biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00706.1
GO:0004252 - serine-type endopeptidase activity [Evidence IEA]
GO:0006465 - signal peptide processing [Evidence IEA]
COORDINATES: protein motif:HMM:NF016764.2
COORDINATES: protein motif:HMM:NF012301.2
GO:0000160 - phosphorelay signal transduction system [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013781282.1
class II fructose-1,6-bisphosphate aldolase
COORDINATES: similar to AA sequence:RefSeq:WP_013298953.1
GO:0016832 - aldehyde-lyase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_015051805.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0008186 - ATP-dependent activity, acting on RNA [Evidence IEA]; GO:0003723 - RNA binding [Evidence IEA]
GO:0006353 - DNA-templated transcription termination [Evidence IEA]
COORDINATES: protein motif:HMM:NF024491.2
COORDINATES: similar to AA sequence:RefSeq:WP_011345431.1
GO:0003735 - structural constituent of ribosome [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_015051781.1
COORDINATES: similar to AA sequence:RefSeq:WP_013403541.1
GO:0016149 - translation release factor activity, codon specific [Evidence IEA]
GO:0006415 - translational termination [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00536.1
GO:0008757 - S-adenosylmethionine-dependent methyltransferase activity [Evidence IEA]
GO:0018364 - peptidyl-glutamine methylation [Evidence IEA]; GO:0006412 - translation [Evidence IEA]
peptide chain release factor N(5)-glutamine methyltransferase
COORDINATES: protein motif:HMM:NF007111.0
GO:0015385 - sodium:proton antiporter activity [Evidence IEA]
GO:1902600 - proton transmembrane transport [Evidence IEA]; GO:0006814 - sodium ion transport [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_015738458.1
GO:0006313 - transposition, DNA-mediated [Evidence IEA]
IS200/IS605 family accessory protein TnpB-related protein
COORDINATES: protein motif:HMM:TIGR00057.1
GO:0061710 - L-threonylcarbamoyladenylate synthase [Evidence IEA]
GO:0006400 - tRNA modification [Evidence IEA]
COORDINATES: protein motif:HMM:NF014689.2
COORDINATES: similar to AA sequence:RefSeq:WP_012269763.1
low molecular weight protein arginine phosphatase
COORDINATES: similar to AA sequence:RefSeq:WP_013779900.1
GO:0004751 - ribose-5-phosphate isomerase activity [Evidence IEA]
GO:0009052 - pentose-phosphate shunt, non-oxidative branch [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_015051727.1
GO:0004372 - glycine hydroxymethyltransferase activity [Evidence IEA]; GO:0030170 - pyridoxal phosphate binding [Evidence IEA]; GO:0070905 - serine binding [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA]
GO:0019264 - glycine biosynthetic process from serine [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014042931.1
cytidine/deoxycytidylate deaminase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_011026285.1
COORDINATES: similar to AA sequence:RefSeq:WP_013291030.1
GO:0008761 - UDP-N-acetylglucosamine 2-epimerase activity [Evidence IEA]
GO:0009103 - lipopolysaccharide biosynthetic process [Evidence IEA]
UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing)
COORDINATES: protein motif:HMM:NF021073.2
COORDINATES: protein motif:HMM:TIGR01131.1
GO:0000276 - mitochondrial proton-transporting ATP synthase complex, coupling factor F(o) [Evidence IEA]; GO:0045264 - plasma membrane proton-transporting ATP synthase complex, coupling factor F(o) [Evidence IEA]; GO:0045263 - proton-transporting ATP synthase complex, coupling factor F(o) [Evidence IEA]
GO:0046933 - proton-transporting ATP synthase activity, rotational mechanism [Evidence IEA]
GO:0015986 - proton motive force-driven ATP synthesis [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004695064.1
GO:0015078 - proton transmembrane transporter activity [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR01144.1
COORDINATES: protein motif:HMM:NF004402.0
GO:0000275 - mitochondrial proton-transporting ATP synthase complex, catalytic sector F(1) [Evidence IEA]; GO:0045262 - plasma membrane proton-transporting ATP synthase complex, catalytic core F(1) [Evidence IEA]; GO:0045261 - proton-transporting ATP synthase complex, catalytic core F(1) [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_016292873.1
COORDINATES: similar to AA sequence:RefSeq:WP_011345412.1
COORDINATES: similar to AA sequence:RefSeq:WP_015051761.1
COORDINATES: similar to AA sequence:RefSeq:WP_011345410.1
COORDINATES: protein motif:HMM:TIGR02870.1
GO:0030436 - asexual sporulation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_003388385.1
GO:0140110 - transcription regulator activity [Evidence IEA]
sporulation transcriptional regulator SpoIIID
COORDINATES: protein motif:HMM:NF012311.2
S-layer homology domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_015051838.1
sigma-70 family RNA polymerase sigma factor
COORDINATES: protein motif:HMM:NF025025.2
GO:0016757 - glycosyltransferase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF021575.2
COORDINATES: protein motif:HMM:NF013088.2
COORDINATES: protein motif:HMM:NF024629.2
COORDINATES: protein motif:HMM:NF003349.0
GO:0008495 - protoheme IX farnesyltransferase activity [Evidence IEA]
GO:0048034 - heme O biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF013231.2
GO:0003677 - DNA binding [Evidence IEA]; GO:0003700 - DNA-binding transcription factor activity [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR01730.1
GO:0005215 - transporter activity [Evidence IEA]
efflux RND transporter periplasmic adaptor subunit
COORDINATES: protein motif:HMM:NF012739.2
HlyD family efflux transporter periplasmic adaptor subunit
COORDINATES: protein motif:HMM:TIGR00711.1
GO:0005886 - plasma membrane [Evidence IEA]
GO:0009410 - response to xenobiotic stimulus [Evidence IEA]; GO:0006855 - xenobiotic transmembrane transport [Evidence IEA]
DHA2 family efflux MFS transporter permease subunit
COORDINATES: similar to AA sequence:RefSeq:WP_015051841.1
WecB/TagA/CpsF family glycosyltransferase
COORDINATES: protein motif:HMM:TIGR03609.1
GO:0046919 - pyruvyltransferase activity [Evidence IEA]
GO:0042545 - cell wall modification [Evidence IEA]
COORDINATES: protein motif:HMM:NF016800.2
COORDINATES: protein motif:HMM:NF012744.2
COORDINATES: similar to AA sequence:RefSeq:WP_015049930.1
COORDINATES: protein motif:HMM:NF018488.2
COORDINATES: protein motif:HMM:NF006050.0
COORDINATES: similar to AA sequence:RefSeq:WP_013756606.1
COORDINATES: similar to AA sequence:RefSeq:WP_013756608.1
COORDINATES: protein motif:HMM:NF019292.2
nucleoside recognition domain-containing protein
COORDINATES: protein motif:HMM:NF012593.2
dicarboxylate/amino acid:cation symporter
COORDINATES: similar to AA sequence:RefSeq:WP_013297983.1
GO:0004595 - pantetheine-phosphate adenylyltransferase activity [Evidence IEA]
GO:0015937 - coenzyme A biosynthetic process [Evidence IEA]
pantetheine-phosphate adenylyltransferase
COORDINATES: protein motif:HMM:TIGR00095.1
GO:0052913 - 16S rRNA (guanine(966)-N(2))-methyltransferase activity [Evidence IEA]
GO:0031167 - rRNA methylation [Evidence IEA]
16S rRNA (guanine(966)-N(2))-methyltransferase RsmD
COORDINATES: similar to AA sequence:RefSeq:WP_003870352.1
COORDINATES: protein motif:HMM:NF024603.2
COORDINATES: protein motif:HMM:NF013180.2
GO:0005525 - GTP binding [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_015738837.1
COORDINATES: similar to AA sequence:RefSeq:WP_015739382.1
COORDINATES: similar to AA sequence:RefSeq:WP_012994968.1
GO:0004175 - endopeptidase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013986031.1
alpha/beta-type small acid-soluble spore protein
COORDINATES: protein motif:HMM:NF008168.0
GO:0005524 - ATP binding [Evidence IEA]; GO:0003678 - DNA helicase activity [Evidence IEA]; GO:0003676 - nucleic acid binding [Evidence IEA]
GO:0006310 - DNA recombination [Evidence IEA]; GO:0006281 - DNA repair [Evidence IEA]
COORDINATES: protein motif:HMM:NF012492.2
GO:0005524 - ATP binding [Evidence IEA]; GO:0016887 - ATP hydrolysis activity [Evidence IEA]; GO:0004386 - helicase activity [Evidence IEA]; GO:0003676 - nucleic acid binding [Evidence IEA]
incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_015739914.1
GO:0015074 - DNA integration [Evidence IEA]
integrase core domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_011917352.1
GO:0022627 - cytosolic small ribosomal subunit [Evidence IEA]; GO:0000314 - organellar small ribosomal subunit [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR02856.1
GO:0005575 - cellular_component [Evidence IEA]
GO:0003674 - molecular_function [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR02876.1
COORDINATES: similar to AA sequence:RefSeq:WP_013788271.1
COORDINATES: protein motif:HMM:NF019317.2
COORDINATES: protein motif:HMM:TIGR00043.2
GO:0046872 - metal ion binding [Evidence IEA]; GO:0004540 - ribonuclease activity [Evidence IEA]
GO:0042254 - ribosome biogenesis [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_015051332.1
GO:0004126 - cytidine deaminase activity [Evidence IEA]
GO:0008655 - pyrimidine-containing compound salvage [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_018765845.1
GO:0005525 - GTP binding [Evidence IEA]; GO:0003723 - RNA binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_015051440.1
COORDINATES: protein motif:HMM:TIGR01536.1
GO:0004066 - asparagine synthase (glutamine-hydrolyzing) activity [Evidence IEA]
GO:0006529 - asparagine biosynthetic process [Evidence IEA]
incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
asparagine synthase (glutamine-hydrolyzing)
COORDINATES: similar to AA sequence:RefSeq:WP_015049712.1
COORDINATES: similar to AA sequence:RefSeq:WP_013779859.1
GO:1904047 - S-adenosyl-L-methionine binding [Evidence IEA]
COORDINATES: protein motif:HMM:NF019342.2
gamma-glutamyl-gamma-aminobutyrate hydrolase family protein
COORDINATES: protein motif:HMM:TIGR00693.1
GO:0004789 - thiamine-phosphate diphosphorylase activity [Evidence IEA]
GO:0009228 - thiamine biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_009052803.1
GO:0051536 - iron-sulfur cluster binding [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR01379.1
GO:0009030 - thiamine-phosphate kinase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_003869316.1
GO:0016887 - ATP hydrolysis activity [Evidence IEA]
tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE
COORDINATES: protein motif:HMM:TIGR03725.1
GO:0003725 - double-stranded RNA binding [Evidence IEA]
tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex dimerization subunit type 1 TsaB
COORDINATES: similar to AA sequence:RefSeq:WP_003866846.1
GO:0008999 - peptide-alanine-alpha-N-acetyltransferase activity [Evidence IEA]
GO:0036211 - protein modification process [Evidence IEA]; GO:0042254 - ribosome biogenesis [Evidence IEA]
ribosomal protein S18-alanine N-acetyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_013780888.1
tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD
COORDINATES: similar to AA sequence:RefSeq:WP_011343727.1
COORDINATES: protein motif:HMM:NF014671.2
GO:0016783 - sulfurtransferase activity [Evidence IEA]
formate dehydrogenase accessory sulfurtransferase FdhD
COORDINATES: similar to AA sequence:RefSeq:WP_015739015.1
IS1182-like element ISAmde1 family transposase
COORDINATES: protein motif:HMM:TIGR01766.2
COORDINATES: similar to AA sequence:RefSeq:WP_015617970.1
GO:0009326 - formate dehydrogenase complex [Evidence IEA]
GO:0008863 - formate dehydrogenase (NAD+) activity [Evidence IEA]
GO:0015942 - formate metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011343662.1
GO:0051539 - 4 iron, 4 sulfur cluster binding [Evidence IEA]; GO:0010181 - FMN binding [Evidence IEA]
NADH-quinone oxidoreductase subunit NuoF
COORDINATES: similar to AA sequence:RefSeq:WP_011343661.1
GO:0016491 - oxidoreductase activity [Evidence IEA]
NADH-quinone oxidoreductase subunit NuoE
COORDINATES: protein motif:HMM:TIGR02727.1
GO:0030272 - 5-formyltetrahydrofolate cyclo-ligase activity [Evidence IEA]
GO:0006730 - one-carbon metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_015738210.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0016887 - ATP hydrolysis activity [Evidence IEA]
GO:0006457 - protein folding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011343737.1
GO:0016887 - ATP hydrolysis activity [Evidence IEA]; GO:0005515 - protein binding [Evidence IEA]
60 kDa chaperone family; promotes refolding of misfolded polypeptides especially under stressful conditions; forms two stacked rings of heptamers to form a barrel-shaped 14mer; ends can be capped by GroES; misfolded proteins enter the barrel where they are refolded when GroES binds; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_013297247.1
GO:0004124 - cysteine synthase activity [Evidence IEA]
GO:0006535 - cysteine biosynthetic process from serine [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013781781.1
COORDINATES: similar to AA sequence:RefSeq:WP_013781780.1
GO:0043805 - indolepyruvate ferredoxin oxidoreductase activity [Evidence IEA]
indolepyruvate ferredoxin oxidoreductase subunit alpha
COORDINATES: protein motif:HMM:NF013707.2
indolepyruvate oxidoreductase subunit beta
COORDINATES: similar to AA sequence:RefSeq:WP_013756785.1
COORDINATES: similar to AA sequence:RefSeq:WP_015907956.1
COORDINATES: protein motif:HMM:NF020391.2
COORDINATES: similar to AA sequence:RefSeq:WP_002443355.1
malic enzyme-like NAD(P)-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_011024587.1
COORDINATES: protein motif:HMM:NF015558.2
putative sulfate exporter family transporter
COORDINATES: protein motif:HMM:NF008468.0
two-component system sensor histidine kinase AtoS
COORDINATES: similar to AA sequence:RefSeq:WP_015738559.1
GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
sigma-54 dependent transcriptional regulator
COORDINATES: protein motif:HMM:NF012791.2
GO:0032559 - adenyl ribonucleotide binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013756890.1
sulfite exporter TauE/SafE family protein
COORDINATES: protein motif:HMM:NF025038.2
COORDINATES: protein motif:HMM:TIGR00589.1
GO:0003677 - DNA binding [Evidence IEA]; GO:0003908 - methylated-DNA-[protein]-cysteine S-methyltransferase activity [Evidence IEA]
methylated-DNA--[protein]-cysteine S-methyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_011343306.1
GO:0022625 - cytosolic large ribosomal subunit [Evidence IEA]; GO:0000311 - plastid large ribosomal subunit [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013411892.1
GO:0022625 - cytosolic large ribosomal subunit [Evidence IEA]; GO:0000315 - organellar large ribosomal subunit [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_015049686.1
COORDINATES: protein motif:HMM:NF003242.0
cofactor-independent phosphoglycerate mutase
COORDINATES: protein motif:HMM:NF026040.2
COORDINATES: similar to AA sequence:RefSeq:WP_011025293.1
GO:0003924 - GTPase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011343319.1
GO:0004349 - glutamate 5-kinase activity [Evidence IEA]
GO:0006561 - proline biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF023395.2
COORDINATES: similar to AA sequence:RefSeq:WP_015908071.1
GO:0004350 - glutamate-5-semialdehyde dehydrogenase activity [Evidence IEA]; GO:0016620 - oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor [Evidence IEA]
COORDINATES: protein motif:HMM:NF013670.2
GO:0046872 - metal ion binding [Evidence IEA]; GO:0008745 - N-acetylmuramoyl-L-alanine amidase activity [Evidence IEA]
frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_013297631.1
GO:0016779 - nucleotidyltransferase activity [Evidence IEA]
GO:0009435 - NAD biosynthetic process [Evidence IEA]
nicotinate-nucleotide adenylyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_011343327.1
COORDINATES: similar to AA sequence:RefSeq:WP_011343329.1
GO:0043022 - ribosome binding [Evidence IEA]
GO:0017148 - negative regulation of translation [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR01910.1
COORDINATES: similar to AA sequence:RefSeq:WP_015739890.1
COORDINATES: protein motif:HMM:NF014069.2
GO:0016787 - hydrolase activity [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]
COORDINATES: protein motif:HMM:NF012907.2
GO:0005975 - carbohydrate metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_015051198.1
trypsin-like peptidase domain-containing protein
COORDINATES: protein motif:HMM:NF012970.2
GO:0008236 - serine-type peptidase activity [Evidence IEA]
D-alanyl-D-alanine carboxypeptidase family protein
COORDINATES: protein motif:HMM:TIGR00704.1
GO:0015114 - phosphate ion transmembrane transporter activity [Evidence IEA]; GO:0005436 - sodium:phosphate symporter activity [Evidence IEA]
GO:0035435 - phosphate ion transmembrane transport [Evidence IEA]; GO:0044341 - sodium-dependent phosphate transport [Evidence IEA]
COORDINATES: protein motif:HMM:NF027583.2
COORDINATES: protein motif:HMM:NF015052.2
COORDINATES: protein motif:HMM:NF012926.2
COORDINATES: protein motif:HMM:NF005596.0
COORDINATES: similar to AA sequence:RefSeq:WP_011344520.1
GO:0008792 - arginine decarboxylase activity [Evidence IEA]
GO:0006527 - arginine catabolic process [Evidence IEA]; GO:0006596 - polyamine biosynthetic process [Evidence IEA]
arginine decarboxylase, pyruvoyl-dependent
COORDINATES: similar to AA sequence:RefSeq:WP_013788001.1
COORDINATES: similar to AA sequence:RefSeq:WP_015050092.1
GO:0008783 - agmatinase activity [Evidence IEA]
GO:0008295 - spermidine biosynthetic process [Evidence IEA]
COORDINATES: nucleotide motif:Rfam:14.4:RF00013
Derived by automated computational analysis using gene prediction method: cmsearch.
COORDINATES: similar to AA sequence:RefSeq:WP_015050811.1
GO:0016783 - sulfurtransferase activity [Evidence IEA]; GO:0016740 - transferase activity [Evidence IEA]
GO:0008033 - tRNA processing [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_003868038.1
bis-aminopropyl spermidine synthase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_015049863.1
GO:0008997 - ribonuclease R activity [Evidence IEA]
GO:0006401 - RNA catabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011345156.1
COORDINATES: similar to AA sequence:RefSeq:WP_002009728.1
GO:0008745 - N-acetylmuramoyl-L-alanine amidase activity [Evidence IEA]
GO:0009253 - peptidoglycan catabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013780280.1
ATP-dependent Clp protease proteolytic subunit
COORDINATES: protein motif:HMM:NF013933.2
GO:0006865 - amino acid transport [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_015051585.1
COORDINATES: similar to AA sequence:RefSeq:WP_013150667.1
AmmeMemoRadiSam system radical SAM enzyme
COORDINATES: similar to AA sequence:RefSeq:WP_015739035.1
frameshifted; incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_015051059.1
GO:0004084 - branched-chain-amino-acid transaminase activity [Evidence IEA]
GO:0009082 - branched-chain amino acid biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011024553.1
GO:0004160 - dihydroxy-acid dehydratase activity [Evidence IEA]
GO:0009097 - isoleucine biosynthetic process [Evidence IEA]; GO:0009099 - valine biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013149507.1
GO:0005948 - acetolactate synthase complex [Evidence IEA]
GO:0003984 - acetolactate synthase activity [Evidence IEA]
biosynthetic-type acetolactate synthase large subunit
COORDINATES: similar to AA sequence:RefSeq:WP_013411358.1
GO:1990610 - acetolactate synthase regulator activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_015051055.1
COORDINATES: protein motif:HMM:NF002086.0
GO:0003852 - 2-isopropylmalate synthase activity [Evidence IEA]
GO:0019752 - carboxylic acid metabolic process [Evidence IEA]; GO:0009098 - leucine biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011343456.1
GO:0009316 - 3-isopropylmalate dehydratase complex [Evidence IEA]
GO:0003861 - 3-isopropylmalate dehydratase activity [Evidence IEA]
GO:0009098 - leucine biosynthetic process [Evidence IEA]
3-isopropylmalate dehydratase large subunit
COORDINATES: similar to AA sequence:RefSeq:WP_015051052.1
3-isopropylmalate dehydratase small subunit
COORDINATES: similar to AA sequence:RefSeq:WP_013782328.1
GO:0043714 - (R)-citramalate synthase activity [Evidence IEA]
GO:0009097 - isoleucine biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011344904.1
GO:0008966 - phosphoglucosamine mutase activity [Evidence IEA]
GO:0009103 - lipopolysaccharide biosynthetic process [Evidence IEA]; GO:0009252 - peptidoglycan biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_015738279.1
GO:0004360 - glutamine-fructose-6-phosphate transaminase (isomerizing) activity [Evidence IEA]
GO:0006040 - amino sugar metabolic process [Evidence IEA]; GO:0009252 - peptidoglycan biosynthetic process [Evidence IEA]
glutamine--fructose-6-phosphate transaminase (isomerizing)
COORDINATES: similar to AA sequence:RefSeq:WP_009611155.1
COORDINATES: protein motif:HMM:NF024065.2
COORDINATES: protein motif:HMM:NF022460.2
ISLre2-like element ISAmde2 family transposase
COORDINATES: similar to AA sequence:RefSeq:WP_015738283.1
COORDINATES: similar to AA sequence:RefSeq:WP_015738284.1
COORDINATES: similar to AA sequence:RefSeq:WP_011343887.1
COORDINATES: similar to AA sequence:RefSeq:WP_011343886.1
COORDINATES: protein motif:HMM:NF015094.2
COORDINATES: protein motif:HMM:NF013970.2
type II toxin-antitoxin system VapC family toxin
COORDINATES: similar to AA sequence:RefSeq:WP_011343889.1
GO:0006935 - chemotaxis [Evidence IEA]; GO:0007165 - signal transduction [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011343890.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0000155 - phosphorelay sensor kinase activity [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR03824.1
GO:0045892 - negative regulation of DNA-templated transcription [Evidence IEA]
flagellar biosynthesis anti-sigma factor FlgM
COORDINATES: protein motif:HMM:TIGR02492.1
GO:0009424 - bacterial-type flagellum hook [Evidence IEA]
GO:0005198 - structural molecule activity [Evidence IEA]
GO:0001539 - cilium or flagellum-dependent cell motility [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR02550.1
COORDINATES: protein motif:HMM:NF039791.1
COORDINATES: similar to AA sequence:RefSeq:WP_013402990.1
GO:0071973 - bacterial-type flagellum-dependent cell motility [Evidence IEA]
COORDINATES: protein motif:HMM:NF012745.2
TPR domain-containing glycosyltransferase
COORDINATES: protein motif:HMM:NF015602.2
COORDINATES: protein motif:HMM:NF018852.2
GO:0009288 - bacterial-type flagellum [Evidence IEA]
GO:0007155 - cell adhesion [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012994622.1
COORDINATES: similar to AA sequence:RefSeq:WP_013755435.1
GO:0008879 - glucose-1-phosphate thymidylyltransferase activity [Evidence IEA]
GO:0000271 - polysaccharide biosynthetic process [Evidence IEA]
glucose-1-phosphate thymidylyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_013289436.1
dTDP-4-dehydrorhamnose 3,5-epimerase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_020801803.1
GO:0008460 - dTDP-glucose 4,6-dehydratase activity [Evidence IEA]
GO:0019305 - dTDP-rhamnose biosynthetic process [Evidence IEA]; GO:0009243 - O antigen biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_015049486.1
type II toxin-antitoxin system prevent-host-death family antitoxin
COORDINATES: similar to AA sequence:RefSeq:WP_015049485.1
COORDINATES: protein motif:HMM:NF016167.2
COORDINATES: similar to AA sequence:RefSeq:WP_015739706.1
COORDINATES: protein motif:HMM:TIGR01552.1
type II toxin-antitoxin system Phd/YefM family antitoxin
COORDINATES: protein motif:HMM:NF020419.2
nucleotidyl transferase AbiEii/AbiGii toxin family protein
COORDINATES: similar to AA sequence:RefSeq:WP_015738769.1
COORDINATES: similar to AA sequence:RefSeq:WP_015738768.1
COORDINATES: protein motif:HMM:NF040570.1
COORDINATES: similar to AA sequence:RefSeq:WP_015739658.1
internal stop; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: nucleotide motif:Rfam:14.4:RF00174
cobalamin riboswitch; Derived by automated computational analysis using gene prediction method: cmsearch.
COORDINATES: similar to AA sequence:RefSeq:WP_015049506.1
ABC transporter substrate-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_015049507.1
GO:0140359 - ABC-type transporter activity [Evidence IEA]; GO:0042626 - ATPase-coupled transmembrane transporter activity [Evidence IEA]
GO:0006826 - iron ion transport [Evidence IEA]
COORDINATES: protein motif:HMM:NF037832.2
COORDINATES: protein motif:HMM:NF012235.2
GO:0140359 - ABC-type transporter activity [Evidence IEA]; GO:0005524 - ATP binding [Evidence IEA]; GO:0016887 - ATP hydrolysis activity [Evidence IEA]; GO:0042626 - ATPase-coupled transmembrane transporter activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_015617937.1
COORDINATES: similar to AA sequence:RefSeq:WP_015738332.1
4Fe-4S dicluster domain-containing protein
COORDINATES: protein motif:HMM:NF016131.2
formate dehydrogenase accessory protein FdhE
COORDINATES: similar to AA sequence:RefSeq:WP_015738970.1
COORDINATES: protein motif:HMM:TIGR00072.1
COORDINATES: similar to AA sequence:RefSeq:WP_013756843.1
GO:0051539 - 4 iron, 4 sulfur cluster binding [Evidence IEA]; GO:0009055 - electron transfer activity [Evidence IEA]; GO:0005506 - iron ion binding [Evidence IEA]; GO:0016695 - oxidoreductase activity, acting on hydrogen as donor [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_015739187.1
COORDINATES: protein motif:HMM:NF008133.0
COORDINATES: similar to AA sequence:RefSeq:WP_015739872.1
GO:0003964 - RNA-directed DNA polymerase activity [Evidence IEA]
GO:0000373 - Group II intron splicing [Evidence IEA]
group II intron reverse transcriptase/maturase
COORDINATES: similar to AA sequence:RefSeq:WP_013430191.1
GO:0004812 - aminoacyl-tRNA ligase activity [Evidence IEA]; GO:0005524 - ATP binding [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]; GO:0004832 - valine-tRNA ligase activity [Evidence IEA]
GO:0006438 - valyl-tRNA aminoacylation [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR01499.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0008841 - dihydrofolate synthase activity [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0004326 - tetrahydrofolylpolyglutamate synthase activity [Evidence IEA]
folylpolyglutamate synthase/dihydrofolate synthase family protein
COORDINATES: protein motif:HMM:TIGR00912.1
COORDINATES: protein motif:HMM:NF015292.2
COORDINATES: protein motif:HMM:TIGR02887.1
Ger(x)C family spore germination protein
COORDINATES: protein motif:HMM:NF001911.0
COORDINATES: similar to AA sequence:RefSeq:WP_009052008.1
GO:0016829 - lyase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_015310638.1
GO:0016836 - hydro-lyase activity [Evidence IEA]
FumA C-terminus/TtdB family hydratase beta subunit
COORDINATES: similar to AA sequence:RefSeq:WP_015738345.1
GO:0004756 - selenide, water dikinase activity [Evidence IEA]
GO:0001887 - selenium compound metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011917155.1
GO:0009320 - phosphoribosylaminoimidazole carboxylase complex [Evidence IEA]
GO:0004638 - phosphoribosylaminoimidazole carboxylase activity [Evidence IEA]
GO:0009152 - purine ribonucleotide biosynthetic process [Evidence IEA]
5-(carboxyamino)imidazole ribonucleotide mutase
COORDINATES: similar to AA sequence:RefSeq:WP_016476317.1
GO:0004018 - N6-(1,2-dicarboxyethyl)AMP AMP-lyase (fumarate-forming) activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013412160.1
GO:0004639 - phosphoribosylaminoimidazolesuccinocarboxamide synthase activity [Evidence IEA]
GO:0006164 - purine nucleotide biosynthetic process [Evidence IEA]
phosphoribosylaminoimidazolesuccinocarboxamide synthase
COORDINATES: similar to AA sequence:RefSeq:WP_003866807.1
GO:0004044 - amidophosphoribosyltransferase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011025005.1
GO:0004641 - phosphoribosylformylglycinamidine cyclo-ligase activity [Evidence IEA]
GO:0006189 - 'de novo' IMP biosynthetic process [Evidence IEA]; GO:0009152 - purine ribonucleotide biosynthetic process [Evidence IEA]
phosphoribosylformylglycinamidine cyclo-ligase
COORDINATES: similar to AA sequence:RefSeq:WP_016132269.1
GO:0003824 - catalytic activity [Evidence IEA]; GO:0003937 - IMP cyclohydrolase activity [Evidence IEA]; GO:0004643 - phosphoribosylaminoimidazolecarboxamide formyltransferase activity [Evidence IEA]
GO:0006189 - 'de novo' IMP biosynthetic process [Evidence IEA]; GO:0006164 - purine nucleotide biosynthetic process [Evidence IEA]
bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase
COORDINATES: similar to AA sequence:RefSeq:WP_015049962.1
GO:0004637 - phosphoribosylamine-glycine ligase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF013013.2
GO:0004399 - histidinol dehydrogenase activity [Evidence IEA]
GO:0000105 - histidine biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_009610409.1
GO:0004424 - imidazoleglycerol-phosphate dehydratase activity [Evidence IEA]
imidazoleglycerol-phosphate dehydratase HisB
COORDINATES: similar to AA sequence:RefSeq:WP_015049996.1
GO:0016884 - carbon-nitrogen ligase activity, with glutamine as amido-N-donor [Evidence IEA]; GO:0000107 - imidazoleglycerol-phosphate synthase activity [Evidence IEA]
imidazole glycerol phosphate synthase subunit HisH
COORDINATES: similar to AA sequence:RefSeq:WP_015049997.1
GO:0003949 - 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino]imidazole-4- carboxamide isomerase activity [Evidence IEA]
1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino]imidazole-4- carboxamide isomerase
COORDINATES: similar to AA sequence:RefSeq:WP_006569519.1
GO:0000107 - imidazoleglycerol-phosphate synthase activity [Evidence IEA]
imidazole glycerol phosphate synthase subunit HisF
COORDINATES: protein motif:HMM:NF002747.0
GO:0004635 - phosphoribosyl-AMP cyclohydrolase activity [Evidence IEA]; GO:0004636 - phosphoribosyl-ATP diphosphatase activity [Evidence IEA]
bifunctional phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP diphosphatase HisIE
COORDINATES: protein motif:HMM:NF015983.2
GO:0051539 - 4 iron, 4 sulfur cluster binding [Evidence IEA]; GO:0003824 - catalytic activity [Evidence IEA]; GO:1904047 - S-adenosyl-L-methionine binding [Evidence IEA]
COORDINATES: protein motif:HMM:NF013429.2
GO:0016853 - isomerase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF012245.2
GO:0007165 - signal transduction [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_015738395.1
COORDINATES: protein motif:HMM:NF013799.2
COORDINATES: protein motif:HMM:NF013793.2
COORDINATES: protein motif:HMM:NF013426.2
NAD(P)H-dependent oxidoreductase subunit E
COORDINATES: similar to AA sequence:RefSeq:WP_011916191.1
COORDINATES: protein motif:HMM:NF022059.2
COORDINATES: protein motif:HMM:NF012602.2
COORDINATES: similar to AA sequence:RefSeq:WP_013755418.1
GO:0018492 - carbon-monoxide dehydrogenase (acceptor) activity [Evidence IEA]
anaerobic carbon-monoxide dehydrogenase catalytic subunit
COORDINATES: protein motif:HMM:NF007078.0
acetyl-CoA decarbonylase/synthase complex subunit alpha/beta
COORDINATES: similar to AA sequence:RefSeq:WP_011344137.1
acetyl-CoA decarbonylase/synthase complex subunit gamma
COORDINATES: protein motif:HMM:NF025925.2
COORDINATES: similar to AA sequence:RefSeq:WP_011344139.1
COORDINATES: similar to AA sequence:RefSeq:WP_015050601.1
acetyl-CoA decarbonylase/synthase complex subunit delta
COORDINATES: similar to AA sequence:RefSeq:WP_011344141.1
methyltetrahydrofolate cobalamin methyltransferase
COORDINATES: protein motif:HMM:NF019604.2
COORDINATES: similar to AA sequence:RefSeq:WP_015739316.1
COORDINATES: protein motif:HMM:NF023646.2
methylenetetrahydrofolate reductase C-terminal domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_013780521.1
GO:0004489 - methylenetetrahydrofolate reductase (NAD(P)H) activity [Evidence IEA]
GO:0006555 - methionine metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011344072.1
GO:0008839 - 4-hydroxy-tetrahydrodipicolinate reductase [Evidence IEA]
GO:0009089 - lysine biosynthetic process via diaminopimelate [Evidence IEA]
4-hydroxy-tetrahydrodipicolinate reductase
COORDINATES: similar to AA sequence:RefSeq:WP_011344073.1
COORDINATES: similar to AA sequence:RefSeq:WP_015050247.1
COORDINATES: similar to AA sequence:RefSeq:WP_015050248.1
GO:0004073 - aspartate-semialdehyde dehydrogenase activity [Evidence IEA]; GO:0051287 - NAD binding [Evidence IEA]; GO:0016620 - oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor [Evidence IEA]
GO:0008652 - amino acid biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_015050249.1
GO:0008840 - 4-hydroxy-tetrahydrodipicolinate synthase activity [Evidence IEA]
4-hydroxy-tetrahydrodipicolinate synthase
COORDINATES: protein motif:HMM:NF012738.2
GO:0005524 - ATP binding [Evidence IEA]; GO:0022857 - transmembrane transporter activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_015050478.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0005215 - transporter activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF024772.2
MetQ/NlpA family ABC transporter substrate-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_012818243.1
COORDINATES: protein motif:HMM:TIGR00738.1
COORDINATES: similar to AA sequence:RefSeq:WP_005589100.1
GO:0015205 - nucleobase transmembrane transporter activity [Evidence IEA]
ISLre2-like element ISAmde3 family transposase
COORDINATES: protein motif:HMM:NF013753.2
COORDINATES: protein motif:HMM:NF013677.2
GO:0003677 - DNA binding [Evidence IEA]; GO:0004803 - transposase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013779998.1
COORDINATES: similar to AA sequence:RefSeq:WP_011344410.1
GO:0009116 - nucleoside metabolic process [Evidence IEA]
bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR
COORDINATES: similar to AA sequence:RefSeq:WP_004695535.1
GO:0016597 - amino acid binding [Evidence IEA]; GO:0004070 - aspartate carbamoyltransferase activity [Evidence IEA]
GO:0006207 - 'de novo' pyrimidine nucleobase biosynthetic process [Evidence IEA]; GO:0006520 - amino acid metabolic process [Evidence IEA]
aspartate carbamoyltransferase catalytic subunit
COORDINATES: protein motif:HMM:TIGR00857.1
GO:0004151 - dihydroorotase activity [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013756089.1
GO:0005951 - carbamoyl-phosphate synthase complex [Evidence IEA]
GO:0004088 - carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity [Evidence IEA]
GO:0009220 - pyrimidine ribonucleotide biosynthetic process [Evidence IEA]
glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit
COORDINATES: similar to AA sequence:RefSeq:WP_011025209.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]
GO:0006807 - nitrogen compound metabolic process [Evidence IEA]
carbamoyl-phosphate synthase large subunit
COORDINATES: protein motif:HMM:NF012402.2
dihydroorotate dehydrogenase electron transfer subunit
COORDINATES: protein motif:HMM:NF005574.0
GO:0004152 - dihydroorotate dehydrogenase activity [Evidence IEA]
GO:0006221 - pyrimidine nucleotide biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF001273.0
GO:0004590 - orotidine-5'-phosphate decarboxylase activity [Evidence IEA]
GO:0006207 - 'de novo' pyrimidine nucleobase biosynthetic process [Evidence IEA]; GO:0044205 - 'de novo' UMP biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_009611302.1
GO:0004588 - orotate phosphoribosyltransferase activity [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00644.1
GO:0008297 - single-stranded DNA exodeoxyribonuclease activity [Evidence IEA]
GO:0006310 - DNA recombination [Evidence IEA]
single-stranded-DNA-specific exonuclease RecJ
COORDINATES: similar to AA sequence:RefSeq:WP_015050348.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0005525 - GTP binding [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]
GO:0015970 - guanosine tetraphosphate biosynthetic process [Evidence IEA]
bifunctional (p)ppGpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase
COORDINATES: similar to AA sequence:RefSeq:WP_002324241.1
GO:0004045 - aminoacyl-tRNA hydrolase activity [Evidence IEA]
GO:0008152 - metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011345107.1
GO:0016787 - hydrolase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF013756.2
GO:0010181 - FMN binding [Evidence IEA]; GO:0016646 - oxidoreductase activity, acting on the CH-NH group of donors, NAD or NADP as acceptor [Evidence IEA]
COORDINATES: protein motif:HMM:NF013645.2
COORDINATES: protein motif:HMM:NF013784.2
GO:0015930 - glutamate synthase activity [Evidence IEA]; GO:0016638 - oxidoreductase activity, acting on the CH-NH2 group of donors [Evidence IEA]
GO:0006537 - glutamate biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013781314.1
GO:0004356 - glutamate-ammonia ligase activity [Evidence IEA]
GO:0006542 - glutamine biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011343421.1
double-cubane-cluster-containing anaerobic reductase
COORDINATES: protein motif:HMM:NF013247.2
COORDINATES: protein motif:HMM:NF016593.2
COORDINATES: similar to AA sequence:RefSeq:WP_013755449.1
COORDINATES: protein motif:HMM:NF012933.2
GO:0051539 - 4 iron, 4 sulfur cluster binding [Evidence IEA]; GO:0140078 - class I DNA-(apurinic or apyrimidinic site) endonuclease activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF013798.2
COORDINATES: protein motif:HMM:TIGR02074.1
GO:0008658 - penicillin binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_016291128.1
COORDINATES: similar to AA sequence:RefSeq:WP_015049547.1
DNA integrity scanning diadenylate cyclase DisA
COORDINATES: similar to AA sequence:RefSeq:WP_015049549.1
COORDINATES: protein motif:HMM:NF013308.2
GO:0050518 - 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase activity [Evidence IEA]
GO:0019288 - isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway [Evidence IEA]
2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_011026364.1
GO:0008685 - 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase activity [Evidence IEA]
2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase
COORDINATES: similar to AA sequence:RefSeq:WP_012995933.1
GO:0009001 - serine O-acetyltransferase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004404864.1
GO:0004817 - cysteine-tRNA ligase activity [Evidence IEA]
GO:0006423 - cysteinyl-tRNA aminoacylation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011916905.1
GO:0050797 - thymidylate synthase (FAD) activity [Evidence IEA]
GO:0009265 - 2'-deoxyribonucleotide biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00186.1
GO:0008173 - RNA methyltransferase activity [Evidence IEA]
GO:0009451 - RNA modification [Evidence IEA]
23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB
COORDINATES: protein motif:HMM:NF017774.2
COORDINATES: similar to AA sequence:RefSeq:WP_015049657.1
GO:0003677 - DNA binding [Evidence IEA]; GO:0003700 - DNA-binding transcription factor activity [Evidence IEA]; GO:0016987 - sigma factor activity [Evidence IEA]
GO:0006352 - DNA-templated transcription initiation [Evidence IEA]
RNA polymerase sporulation sigma factor SigH
COORDINATES: protein motif:HMM:NF025807.2
COORDINATES: similar to AA sequence:RefSeq:WP_012268992.1
GO:0003746 - translation elongation factor activity [Evidence IEA]
GO:0006414 - translational elongation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_015739073.1
RNA-guided endonuclease TnpB family protein
COORDINATES: protein motif:HMM:NF024547.2
COORDINATES: similar to AA sequence:RefSeq:WP_012818178.1
COORDINATES: similar to AA sequence:RefSeq:WP_012818176.1
COORDINATES: similar to AA sequence:RefSeq:WP_012818172.1
COORDINATES: protein motif:HMM:NF024835.2
COORDINATES: similar to AA sequence:RefSeq:WP_015739580.1
sulfide-dependent adenosine diphosphate thiazole synthase
COORDINATES: similar to AA sequence:RefSeq:WP_013402945.1
GO:0016226 - iron-sulfur cluster assembly [Evidence IEA]
Fe-S cluster assembly scaffold protein NifU
COORDINATES: similar to AA sequence:RefSeq:WP_011917758.1
GO:0031071 - cysteine desulfurase activity [Evidence IEA]
GO:0006520 - amino acid metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_015739832.1
GO:0051539 - 4 iron, 4 sulfur cluster binding [Evidence IEA]; GO:0008987 - quinolinate synthetase A activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013402943.1
COORDINATES: similar to AA sequence:RefSeq:WP_014062237.1
GO:0003824 - catalytic activity [Evidence IEA]; GO:0030151 - molybdenum ion binding [Evidence IEA]; GO:0030170 - pyridoxal phosphate binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_015738429.1
COORDINATES: similar to AA sequence:RefSeq:WP_013780902.1
COORDINATES: similar to AA sequence:RefSeq:WP_003869071.1
GO:0008175 - tRNA methyltransferase activity [Evidence IEA]
tRNA (uridine(34)/cytosine(34)/5- carboxymethylaminomethyluridine(34)-2'-O)- methyltransferase TrmL
COORDINATES: protein motif:HMM:NF013073.2
COORDINATES: similar to AA sequence:RefSeq:WP_015311152.1
GO:0008408 - 3'-5' exonuclease activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013781471.1
trp RNA-binding attenuation protein MtrB
COORDINATES: similar to AA sequence:RefSeq:WP_011344061.1
COORDINATES: similar to AA sequence:RefSeq:WP_011344062.1
GO:0009317 - acetyl-CoA carboxylase complex [Evidence IEA]
GO:0003989 - acetyl-CoA carboxylase activity [Evidence IEA]
GO:0006633 - fatty acid biosynthetic process [Evidence IEA]
acetyl-CoA carboxylase, carboxyltransferase subunit beta
COORDINATES: similar to AA sequence:RefSeq:WP_011344063.1
acetyl-CoA carboxylase carboxyltransferase subunit alpha
COORDINATES: similar to AA sequence:RefSeq:WP_003868325.1
GO:0006096 - glycolytic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_015050049.1
GO:0004743 - pyruvate kinase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF020893.2
COORDINATES: protein motif:HMM:NF014868.2
intein-containing adenosylcobalamin-dependent ribonucleoside-diphosphate reductase
COORDINATES: protein motif:HMM:NF019850.2
COORDINATES: similar to AA sequence:RefSeq:WP_013149482.1
COORDINATES: protein motif:HMM:NF012241.2
COORDINATES: protein motif:HMM:NF024067.2
COORDINATES: similar to AA sequence:RefSeq:WP_015050698.1
GO:0046872 - metal ion binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_015738692.1
COORDINATES: protein motif:HMM:NF015716.2
GO:0000902 - cell morphogenesis [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_015050281.1
GO:0008108 - UDP-glucose:hexose-1-phosphate uridylyltransferase activity [Evidence IEA]
GO:0006012 - galactose metabolic process [Evidence IEA]
galactose-1-phosphate uridylyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_015050282.1
GO:0004373 - glycogen (starch) synthase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF015894.2
COORDINATES: similar to AA sequence:RefSeq:WP_011344122.1
COORDINATES: similar to AA sequence:RefSeq:WP_013781574.1
GO:0055052 - ATP-binding cassette (ABC) transporter complex, substrate-binding subunit-containing [Evidence IEA]; GO:0005886 - plasma membrane [Evidence IEA]
GO:0015415 - ATPase-coupled phosphate ion transmembrane transporter activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013781575.1
phosphate ABC transporter permease subunit PstC
COORDINATES: similar to AA sequence:RefSeq:WP_019907788.1
GO:0055052 - ATP-binding cassette (ABC) transporter complex, substrate-binding subunit-containing [Evidence IEA]
GO:0006817 - phosphate ion transport [Evidence IEA]
phosphate ABC transporter substrate-binding protein
COORDINATES: protein motif:HMM:NF021501.2
COORDINATES: protein motif:HMM:NF024583.2
COORDINATES: protein motif:HMM:NF017902.2
COORDINATES: protein motif:HMM:TIGR00254.1
GO:0052621 - diguanylate cyclase activity [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0005515 - protein binding [Evidence IEA]
sensor domain-containing diguanylate cyclase
COORDINATES: protein motif:HMM:NF039185.1
double zinc ribbon domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_015312289.1
GO:0022626 - cytosolic ribosome [Evidence IEA]; GO:0005840 - ribosome [Evidence IEA]
GO:0045182 - translation regulator activity [Evidence IEA]
GO:0009386 - translational attenuation [Evidence IEA]
ribosome-associated translation inhibitor RaiA
COORDINATES: similar to AA sequence:RefSeq:WP_013298608.1
GO:0006886 - intracellular protein transport [Evidence IEA]; GO:0017038 - protein import [Evidence IEA]; GO:0006605 - protein targeting [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_015738496.1
GO:0003747 - translation release factor activity [Evidence IEA]
programmed frameshift; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_015049801.1
COORDINATES: similar to AA sequence:RefSeq:WP_012268649.1
COORDINATES: similar to AA sequence:RefSeq:WP_015739820.1
COORDINATES: similar to AA sequence:RefSeq:WP_011917848.1
GO:0000910 - cytokinesis [Evidence IEA]; GO:0006810 - transport [Evidence IEA]
COORDINATES: protein motif:HMM:NF038347.1
permease-like cell division protein FtsX
COORDINATES: protein motif:HMM:TIGR00225.1
COORDINATES: similar to AA sequence:RefSeq:WP_015051651.1
COORDINATES: protein motif:HMM:NF015679.2
GO:0016740 - transferase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF014567.2
COORDINATES: protein motif:HMM:TIGR00067.1
GO:0008881 - glutamate racemase activity [Evidence IEA]
GO:0009252 - peptidoglycan biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011343256.1
COORDINATES: similar to AA sequence:RefSeq:WP_015739226.1
COORDINATES: similar to AA sequence:RefSeq:WP_015740069.1
AbrB/MazE/SpoVT family DNA-binding domain-containing protein
COORDINATES: nucleotide motif:Rfam:14.4:RF00010
COORDINATES: protein motif:HMM:TIGR00115.1
GO:0005854 - nascent polypeptide-associated complex [Evidence IEA]
GO:0003755 - peptidyl-prolyl cis-trans isomerase activity [Evidence IEA]; GO:0051082 - unfolded protein binding [Evidence IEA]
GO:0051083 - 'de novo' cotranslational protein folding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012994730.1
GO:0009368 - endopeptidase Clp complex [Evidence IEA]
GO:0004176 - ATP-dependent peptidase activity [Evidence IEA]; GO:0004252 - serine-type endopeptidase activity [Evidence IEA]
ATP-dependent Clp endopeptidase proteolytic subunit ClpP
COORDINATES: similar to AA sequence:RefSeq:WP_011343265.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0016887 - ATP hydrolysis activity [Evidence IEA]; GO:0046983 - protein dimerization activity [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA]
ATP-dependent Clp protease ATP-binding subunit ClpX
COORDINATES: similar to AA sequence:RefSeq:WP_015739578.1
COORDINATES: similar to AA sequence:RefSeq:WP_013780547.1
GO:0016887 - ATP hydrolysis activity [Evidence IEA]; GO:0004252 - serine-type endopeptidase activity [Evidence IEA]
GO:0030436 - asexual sporulation [Evidence IEA]; GO:0006508 - proteolysis [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011343269.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0016887 - ATP hydrolysis activity [Evidence IEA]; GO:0004252 - serine-type endopeptidase activity [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR01479.1
GO:0004476 - mannose-6-phosphate isomerase activity [Evidence IEA]
mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase
COORDINATES: protein motif:HMM:TIGR03990.1
COORDINATES: similar to AA sequence:RefSeq:WP_011918136.1
COORDINATES: similar to AA sequence:RefSeq:WP_015739892.1
COORDINATES: similar to AA sequence:RefSeq:WP_015049447.1
COORDINATES: similar to AA sequence:RefSeq:WP_013755765.1
GO:0043190 - ATP-binding cassette (ABC) transporter complex [Evidence IEA]
GO:0140359 - ABC-type transporter activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF024831.2
ISLre2-like element ISAmde4 family transposase
COORDINATES: protein motif:HMM:TIGR00374.1
lysylphosphatidylglycerol synthase transmembrane domain-containing protein
COORDINATES: protein motif:HMM:NF037100.2
COORDINATES: protein motif:HMM:TIGR03025.1
COORDINATES: similar to AA sequence:RefSeq:WP_012994785.1
COORDINATES: protein motif:HMM:NF012861.2
COORDINATES: similar to AA sequence:RefSeq:WP_011025305.1
GO:0009332 - glutamate-tRNA ligase complex [Evidence IEA]
GO:0004818 - glutamate-tRNA ligase activity [Evidence IEA]
GO:0006424 - glutamyl-tRNA aminoacylation [Evidence IEA]
COORDINATES: protein motif:HMM:NF014035.2
COORDINATES: protein motif:HMM:NF021148.2
COORDINATES: similar to AA sequence:RefSeq:WP_015738223.1
COORDINATES: similar to AA sequence:RefSeq:WP_013298267.1
GO:0003743 - translation initiation factor activity [Evidence IEA]
GO:0006413 - translational initiation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_015050429.1
COORDINATES: similar to AA sequence:RefSeq:WP_013780248.1
GO:0019843 - rRNA binding [Evidence IEA]; GO:0003735 - structural constituent of ribosome [Evidence IEA]
COORDINATES: protein motif:HMM:NF012797.2
GO:0008173 - RNA methyltransferase activity [Evidence IEA]; GO:0016740 - transferase activity [Evidence IEA]
GO:0001510 - RNA methylation [Evidence IEA]
COORDINATES: protein motif:HMM:NF018933.2
COORDINATES: similar to AA sequence:RefSeq:WP_013787804.1
GO:0009328 - phenylalanine-tRNA ligase complex [Evidence IEA]
GO:0004826 - phenylalanine-tRNA ligase activity [Evidence IEA]
GO:0006432 - phenylalanyl-tRNA aminoacylation [Evidence IEA]
phenylalanine--tRNA ligase subunit alpha
COORDINATES: protein motif:HMM:TIGR00472.1
COORDINATES: protein motif:HMM:NF017016.2
GO:0051301 - cell division [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_015050436.1
COORDINATES: protein motif:HMM:NF013316.2
COORDINATES: protein motif:HMM:TIGR01069.1
GO:0030983 - mismatched DNA binding [Evidence IEA]
GO:0006259 - DNA metabolic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF014046.2
COORDINATES: similar to AA sequence:RefSeq:WP_015050050.1
COORDINATES: protein motif:HMM:NF013614.2
SufD family Fe-S cluster assembly protein
COORDINATES: protein motif:HMM:NF012581.2
proton-conducting transporter membrane subunit
COORDINATES: similar to AA sequence:RefSeq:WP_015051204.1
COORDINATES: similar to AA sequence:RefSeq:WP_004399989.1
GO:1990204 - oxidoreductase complex [Evidence IEA]
GO:0008137 - NADH dehydrogenase (ubiquinone) activity [Evidence IEA]; GO:0048038 - quinone binding [Evidence IEA]
GO:0022900 - electron transport chain [Evidence IEA]
NADH-quinone oxidoreductase subunit B family protein
COORDINATES: protein motif:HMM:NF012549.2
GO:0008137 - NADH dehydrogenase (ubiquinone) activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014062054.1
GO:0016151 - nickel cation binding [Evidence IEA]
nickel-dependent hydrogenase large subunit
COORDINATES: protein motif:HMM:NF024634.2
COORDINATES: similar to AA sequence:RefSeq:WP_015739755.1
COORDINATES: similar to AA sequence:RefSeq:WP_015049504.1
COORDINATES: similar to AA sequence:RefSeq:WP_015049514.1
ATP-binding cassette domain-containing protein
COORDINATES: protein motif:HMM:NF013245.2
COORDINATES: protein motif:HMM:TIGR01247.1
COORDINATES: similar to AA sequence:RefSeq:WP_011343825.1
daunorubicin resistance protein DrrA family ABC transporter ATP-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_015050139.1
GO:0003824 - catalytic activity [Evidence IEA]; GO:0050660 - flavin adenine dinucleotide binding [Evidence IEA]
FAD-linked oxidase C-terminal domain-containing protein
COORDINATES: protein motif:HMM:NF019349.2
FadR/GntR family transcriptional regulator
COORDINATES: similar to AA sequence:RefSeq:WP_011343368.1
GO:0008028 - monocarboxylic acid transmembrane transporter activity [Evidence IEA]
GO:0015718 - monocarboxylic acid transport [Evidence IEA]
lactate permease LctP family transporter
COORDINATES: protein motif:HMM:NF014628.2
COORDINATES: similar to AA sequence:RefSeq:WP_015050935.1
COORDINATES: protein motif:HMM:TIGR00260.1
GO:0004795 - threonine synthase activity [Evidence IEA]
GO:0009088 - threonine biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR03717.1
GO:0008150 - biological_process [Evidence IEA]
Members of this highly hydrophobic protein family,regularly are found preceded by the yybP-ykoY manganese riboswitch (see RF00080). A metal cation transport function is proposed.; Members of this highly hydrophobic protein family,regularly are found preceded by the yybP-ykoY manganese riboswitch (see RF00080). A metal cation transport function is proposed; Derived by automated computational analysis using gene prediction method: Protein Homology.
YjbE family putative metal transport protein
COORDINATES: similar to AA sequence:RefSeq:WP_011344305.1
GO:0051539 - 4 iron, 4 sulfur cluster binding [Evidence IEA]; GO:1904047 - S-adenosyl-L-methionine binding [Evidence IEA]; GO:0016782 - transferase activity, transferring sulphur-containing groups [Evidence IEA]
tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB
COORDINATES: protein motif:HMM:TIGR00732.1
GO:0009294 - DNA-mediated transformation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013431795.1
GO:0003677 - DNA binding [Evidence IEA]; GO:0003917 - DNA topoisomerase type I (single strand cut, ATP-independent) activity [Evidence IEA]
GO:0006260 - DNA replication [Evidence IEA]; GO:0006265 - DNA topological change [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011916788.1
GO:0050660 - flavin adenine dinucleotide binding [Evidence IEA]; GO:0047151 - methylenetetrahydrofolate-tRNA-(uracil-5-)- methyltransferase (FADH2-oxidizing) activity [Evidence IEA]
FADH(2)-oxidizing methylenetetrahydrofolate--tRNA-(uracil(54)-C(5))- methyltransferase TrmFO
COORDINATES: protein motif:HMM:NF001399.0
COORDINATES: similar to AA sequence:RefSeq:WP_013780474.1
GO:0004298 - threonine-type endopeptidase activity [Evidence IEA]
GO:0051603 - proteolysis involved in protein catabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_003869176.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0016887 - ATP hydrolysis activity [Evidence IEA]; GO:0008233 - peptidase activity [Evidence IEA]
ATP-dependent protease ATPase subunit HslU
COORDINATES: similar to AA sequence:RefSeq:WP_013432200.1
COORDINATES: similar to AA sequence:RefSeq:WP_013290908.1
COORDINATES: similar to AA sequence:RefSeq:WP_013788074.1
GO:0033862 - UMP kinase activity [Evidence IEA]
GO:0015949 - nucleobase-containing small molecule interconversion [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_009611042.1
GO:0008135 - translation factor activity, RNA binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_009611041.1
GO:0016765 - transferase activity, transferring alkyl or aryl (other than methyl) groups [Evidence IEA]
COORDINATES: protein motif:HMM:NF013327.2
COORDINATES: protein motif:HMM:TIGR02872.1
sporulation integral membrane protein YtvI
COORDINATES: similar to AA sequence:RefSeq:WP_015050226.1
GO:0030604 - 1-deoxy-D-xylulose-5-phosphate reductoisomerase activity [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0070402 - NADPH binding [Evidence IEA]; GO:0005515 - protein binding [Evidence IEA]
GO:0008299 - isoprenoid biosynthetic process [Evidence IEA]
1-deoxy-D-xylulose-5-phosphate reductoisomerase
COORDINATES: similar to AA sequence:RefSeq:WP_011344671.1
GO:0004222 - metalloendopeptidase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_003869139.1
GO:0046429 - 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase activity [Evidence IEA]
GO:0044237 - cellular metabolic process [Evidence IEA]
flavodoxin-dependent (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase
COORDINATES: similar to AA sequence:RefSeq:WP_013433216.1
GO:0002161 - aminoacyl-tRNA editing activity [Evidence IEA]; GO:0004812 - aminoacyl-tRNA ligase activity [Evidence IEA]; GO:0005524 - ATP binding [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]; GO:0004827 - proline-tRNA ligase activity [Evidence IEA]
GO:0006433 - prolyl-tRNA aminoacylation [Evidence IEA]; GO:0006418 - tRNA aminoacylation for protein translation [Evidence IEA]
COORDINATES: protein motif:HMM:NF013411.2
GO:0070497 - 6-carboxy-5,6,7,8-tetrahydropterin synthase activity [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]
GO:0008616 - queuosine biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011343875.1
COORDINATES: similar to AA sequence:RefSeq:WP_011343876.1
COORDINATES: similar to AA sequence:RefSeq:WP_013296926.1
GO:0003934 - GTP cyclohydrolase I activity [Evidence IEA]
GO:0042559 - pteridine-containing compound biosynthetic process [Evidence IEA]; GO:0046654 - tetrahydrofolate biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011343879.1
COORDINATES: similar to AA sequence:RefSeq:WP_015311576.1
GO:0008252 - nucleotidase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011343881.1
COORDINATES: protein motif:HMM:TIGR02900.1
COORDINATES: similar to AA sequence:RefSeq:WP_012269148.1
COORDINATES: similar to AA sequence:RefSeq:WP_015051853.1
GO:0016020 - membrane [Evidence IEA]; GO:0005886 - plasma membrane [Evidence IEA]
COORDINATES: protein motif:HMM:NF019097.2
COORDINATES: similar to AA sequence:RefSeq:WP_015051184.1
GO:0005525 - GTP binding [Evidence IEA]; GO:0003924 - GTPase activity [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00539.1
GO:0051989 - coproporphyrinogen dehydrogenase activity [Evidence IEA]
GO:0006779 - porphyrin-containing compound biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00331.1
GO:0009408 - response to heat [Evidence IEA]
heat-inducible transcriptional repressor HrcA
COORDINATES: similar to AA sequence:RefSeq:WP_011343350.1
COORDINATES: protein motif:HMM:NF010738.0
GO:0000774 - adenyl-nucleotide exchange factor activity [Evidence IEA]; GO:0051087 - chaperone binding [Evidence IEA]; GO:0042803 - protein homodimerization activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF001413.0
COORDINATES: similar to AA sequence:RefSeq:WP_009052595.1
GO:0005515 - protein binding [Evidence IEA]
GO:0006457 - protein folding [Evidence IEA]; GO:0009408 - response to heat [Evidence IEA]
COORDINATES: protein motif:HMM:NF018076.2
GO:0036211 - protein modification process [Evidence IEA]
50S ribosomal protein L11 methyltransferase
COORDINATES: protein motif:HMM:NF008692.0
GO:0008168 - methyltransferase activity [Evidence IEA]
GO:0006364 - rRNA processing [Evidence IEA]
16S rRNA (uracil(1498)-N(3))-methyltransferase
COORDINATES: protein motif:HMM:TIGR00089.1
tRNA (N(6)-L-threonylcarbamoyladenosine(37)-C(2))- methylthiotransferase MtaB
COORDINATES: similar to AA sequence:RefSeq:WP_003869192.1
COORDINATES: similar to AA sequence:RefSeq:WP_013433659.1
COORDINATES: protein motif:HMM:NF014003.2
COORDINATES: protein motif:HMM:NF013672.2
GO:0016810 - hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds [Evidence IEA]
polysaccharide deacetylase family protein
COORDINATES: protein motif:HMM:NF022135.2
COORDINATES: protein motif:HMM:TIGR03959.1
COORDINATES: protein motif:HMM:TIGR01736.1
GO:0004642 - phosphoribosylformylglycinamidine synthase activity [Evidence IEA]
phosphoribosylformylglycinamidine synthase subunit PurL
COORDINATES: protein motif:HMM:NF024897.2
phosphoribosylformylglycinamidine synthase I
COORDINATES: similar to AA sequence:RefSeq:WP_009052530.1
GO:0009331 - glycerol-3-phosphate dehydrogenase complex [Evidence IEA]
GO:0047952 - glycerol-3-phosphate dehydrogenase [NAD(P)+] activity [Evidence IEA]; GO:0051287 - NAD binding [Evidence IEA]
GO:0046168 - glycerol-3-phosphate catabolic process [Evidence IEA]
NAD(P)H-dependent glycerol-3-phosphate dehydrogenase
COORDINATES: similar to AA sequence:RefSeq:WP_011024629.1
COORDINATES: protein motif:HMM:NF001813.0
COORDINATES: similar to AA sequence:RefSeq:WP_011344087.1
GO:0008094 - ATP-dependent activity, acting on DNA [Evidence IEA]; GO:0003677 - DNA binding [Evidence IEA]
GO:0006310 - DNA recombination [Evidence IEA]; GO:0006281 - DNA repair [Evidence IEA]; GO:0009432 - SOS response [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR03527.1
sulfurtransferase-like selenium metabolism protein YedF
COORDINATES: similar to AA sequence:RefSeq:WP_015739557.1
COORDINATES: protein motif:HMM:NF039180.1
COORDINATES: protein motif:HMM:NF015956.2
GO:0046914 - transition metal ion binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013755915.1
GO:0015093 - ferrous iron transmembrane transporter activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF021593.2
COORDINATES: protein motif:HMM:NF014620.2
NifB/NifX family molybdenum-iron cluster-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_003868058.1
COORDINATES: nucleotide motif:Rfam:14.4:RF01055
molybdenum cofactor riboswitch; Derived by automated computational analysis using gene prediction method: cmsearch.
COORDINATES: protein motif:HMM:NF003196.0
tungstate ABC transporter substrate-binding protein WtpA
COORDINATES: similar to AA sequence:RefSeq:WP_015739038.1
GO:0000160 - phosphorelay signal transduction system [Evidence IEA]; GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
GO:0005524 - ATP binding [Evidence IEA]; GO:0000156 - phosphorelay response regulator activity [Evidence IEA]; GO:0004673 - protein histidine kinase activity [Evidence IEA]
HAMP domain-containing sensor histidine kinase
COORDINATES: protein motif:HMM:NF018613.2
GO:0016758 - hexosyltransferase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF014711.2
COORDINATES: protein motif:HMM:NF014418.2
GO:0004805 - trehalose-phosphatase activity [Evidence IEA]
GO:0005992 - trehalose biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF013173.2
GO:0003825 - alpha,alpha-trehalose-phosphate synthase (UDP-forming) activity [Evidence IEA]
COORDINATES: nucleotide motif:Rfam:14.4:RF00379
cyclic di-AMP (ydaO/yuaA leader) riboswitch senses the signaling molecule cyclic di-AMP; Derived by automated computational analysis using gene prediction method: cmsearch.
COORDINATES: similar to AA sequence:RefSeq:WP_012995069.1
COORDINATES: protein motif:HMM:NF018184.2
COORDINATES: nucleotide motif:Rfam:14.4:RF00177
COORDINATES: nucleotide motif:Rfam:14.4:RF02541
COORDINATES: nucleotide motif:Rfam:14.4:RF00001
COORDINATES: protein motif:HMM:NF011056.0
bifunctional molybdenum cofactor guanylyltransferase MobA/molybdopterin-guanine dinucleotide biosynthesis adaptor protein MobB
COORDINATES: protein motif:HMM:TIGR01668.1
GO:0008962 - phosphatidylglycerophosphatase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF001314.0
GO:0004764 - shikimate 3-dehydrogenase (NADP+) activity [Evidence IEA]
GO:0019632 - shikimate metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013781349.1
GO:0004107 - chorismate synthase activity [Evidence IEA]
GO:0009073 - aromatic amino acid family biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF013375.2
COORDINATES: similar to AA sequence:RefSeq:WP_015050752.1
GO:0003856 - 3-dehydroquinate synthase activity [Evidence IEA]
GO:0009423 - chorismate biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011343574.1
GO:0008270 - zinc ion binding [Evidence IEA]
COORDINATES: protein motif:HMM:NF039907.1
COORDINATES: similar to AA sequence:RefSeq:WP_015050735.1
GO:0003855 - 3-dehydroquinate dehydratase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF012766.2
GO:0008233 - peptidase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_009052330.1
COORDINATES: similar to AA sequence:RefSeq:WP_015739819.1
GO:0042132 - fructose 1,6-bisphosphate 1-phosphatase activity [Evidence IEA]; GO:0004332 - fructose-bisphosphate aldolase activity [Evidence IEA]
GO:0006094 - gluconeogenesis [Evidence IEA]
fructose-1,6-bisphosphate aldolase/phosphatase
COORDINATES: protein motif:HMM:NF013718.2
COORDINATES: similar to AA sequence:RefSeq:WP_003867575.1
GO:0004520 - endodeoxyribonuclease activity [Evidence IEA]
GO:0043571 - maintenance of CRISPR repeat elements [Evidence IEA]
type I-B CRISPR-associated endonuclease Cas1b
COORDINATES: similar to AA sequence:RefSeq:WP_011026649.1
GO:0004521 - endoribonuclease activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF014658.2
COORDINATES: similar to AA sequence:RefSeq:WP_011344698.1
GO:0009234 - menaquinone biosynthetic process [Evidence IEA]
cyclic dehypoxanthinyl futalosine synthase
COORDINATES: similar to AA sequence:RefSeq:WP_009610735.1
GO:0004125 - L-seryl-tRNASec selenium transferase activity [Evidence IEA]
GO:0016260 - selenocysteine biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_015049214.1
GO:0001514 - selenocysteine incorporation [Evidence IEA]; GO:0006414 - translational elongation [Evidence IEA]
selenocysteine-specific translation elongation factor
proteasome assembly chaperone 4 family protein
COORDINATES: protein motif:HMM:NF018565.2
COORDINATES: protein motif:HMM:NF022657.2
COORDINATES: protein motif:HMM:NF012234.2
COORDINATES: protein motif:HMM:NF022792.2
COORDINATES: protein motif:HMM:NF012784.2
GO:0003676 - nucleic acid binding [Evidence IEA]
S1 RNA-binding domain-containing protein
COORDINATES: protein motif:HMM:NF017885.2
COORDINATES: similar to AA sequence:RefSeq:WP_015740090.1
GO:0003697 - single-stranded DNA binding [Evidence IEA]
GO:0006310 - DNA recombination [Evidence IEA]; GO:0006281 - DNA repair [Evidence IEA]; GO:0006260 - DNA replication [Evidence IEA]; GO:0006351 - DNA-templated transcription [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012818159.1
COORDINATES: protein motif:HMM:NF024367.2
COORDINATES: protein motif:HMM:NF024252.2
COORDINATES: protein motif:HMM:NF024118.2
COORDINATES: protein motif:HMM:NF025107.2
COORDINATES: protein motif:HMM:TIGR01446.1
COORDINATES: protein motif:HMM:NF013964.2
GO:0004519 - endonuclease activity [Evidence IEA]; GO:0003676 - nucleic acid binding [Evidence IEA]
COORDINATES: protein motif:HMM:NF016214.2
COORDINATES: protein motif:HMM:TIGR04474.1
COORDINATES: protein motif:HMM:NF016362.2
GO:0003677 - DNA binding [Evidence IEA]; GO:0004519 - endonuclease activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012818260.1
COORDINATES: protein motif:HMM:NF014273.2
ParB N-terminal domain-containing protein
COORDINATES: protein motif:HMM:NF013594.2
COORDINATES: protein motif:HMM:NF024078.2
COORDINATES: protein motif:HMM:NF016820.2
COORDINATES: protein motif:HMM:NF040179.1
GO:0009975 - cyclase activity [Evidence IEA]
GO:0009966 - regulation of signal transduction [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_015739356.1
COORDINATES: protein motif:HMM:NF017206.2
COORDINATES: protein motif:HMM:NF012772.2
frameshifted; incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: protein motif:HMM:NF014678.2
COORDINATES: protein motif:HMM:NF024792.2
pilus assembly protein TadG-related protein
COORDINATES: protein motif:HMM:NF013632.2
GO:0004190 - aspartic-type endopeptidase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_015050502.1
COORDINATES: protein motif:HMM:NF012694.2
type II secretion system F family protein
COORDINATES: similar to AA sequence:RefSeq:WP_015739045.1
COORDINATES: protein motif:HMM:NF020250.2
COORDINATES: protein motif:HMM:NF028286.2
COORDINATES: protein motif:HMM:NF025001.2
COORDINATES: protein motif:HMM:NF012652.2
COORDINATES: protein motif:HMM:NF019428.2
TadE/TadG family type IV pilus assembly protein
COORDINATES: protein motif:HMM:NF017518.2
zonular occludens toxin domain-containing protein
COORDINATES: protein motif:HMM:NF014052.2
COORDINATES: similar to AA sequence:RefSeq:WP_015738829.1
COORDINATES: similar to AA sequence:RefSeq:WP_015738819.1
COORDINATES: similar to AA sequence:RefSeq:WP_015739340.1
COORDINATES: protein motif:HMM:NF015728.2
type III-B CRISPR module RAMP protein Cmr1
COORDINATES: protein motif:HMM:TIGR02580.1
type III-B CRISPR module RAMP protein Cmr4
COORDINATES: similar to AA sequence:RefSeq:WP_015738818.1
COORDINATES: similar to AA sequence:RefSeq:WP_015739789.1
COORDINATES: protein motif:HMM:NF037161.2
GO:0000166 - nucleotide binding [Evidence IEA]
GO:0030541 - plasmid partitioning [Evidence IEA]
COORDINATES: protein motif:HMM:NF014581.2
type IV secretory system conjugative DNA transfer family protein
COORDINATES: protein motif:HMM:NF014442.2
GO:0003677 - DNA binding [Evidence IEA]; GO:0008170 - N-methyltransferase activity [Evidence IEA]
GO:0006306 - DNA methylation [Evidence IEA]
TraM recognition domain-containing protein
COORDINATES: protein motif:HMM:NF037096.2
COORDINATES: protein motif:HMM:NF013704.2
GO:0009307 - DNA restriction-modification system [Evidence IEA]
COORDINATES: protein motif:HMM:NF016724.2
GO:0005524 - ATP binding [Evidence IEA]; GO:0003677 - DNA binding [Evidence IEA]; GO:0016787 - hydrolase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_015738846.1
COORDINATES: similar to AA sequence:RefSeq:WP_013780641.1
GO:2001070 - starch binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013780653.1
COORDINATES: protein motif:HMM:NF012695.2
COORDINATES: similar to AA sequence:RefSeq:WP_015738854.1
COORDINATES: similar to AA sequence:RefSeq:WP_015738853.1
COORDINATES: protein motif:HMM:TIGR00255.1
COORDINATES: similar to AA sequence:RefSeq:WP_015050524.1
COORDINATES: similar to AA sequence:RefSeq:WP_003868204.1
GO:0004385 - guanylate kinase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF040563.1
COORDINATES: similar to AA sequence:RefSeq:WP_012818242.1
COORDINATES: protein motif:HMM:TIGR00690.1
GO:0000345 - cytosolic DNA-directed RNA polymerase complex [Evidence IEA]
GO:0003899 - DNA-directed 5'-3' RNA polymerase activity [Evidence IEA]
GO:0006351 - DNA-templated transcription [Evidence IEA]
DNA-directed RNA polymerase subunit omega
COORDINATES: similar to AA sequence:RefSeq:WP_015050521.1
GO:0004632 - phosphopantothenate--cysteine ligase activity [Evidence IEA]; GO:0004633 - phosphopantothenoylcysteine decarboxylase activity [Evidence IEA]
GO:0015937 - coenzyme A biosynthetic process [Evidence IEA]; GO:0015939 - pantothenate metabolic process [Evidence IEA]
bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase CoaBC
COORDINATES: similar to AA sequence:RefSeq:WP_003870112.1
COORDINATES: protein motif:HMM:NF016959.2
COORDINATES: protein motif:HMM:NF017569.2
COORDINATES: protein motif:HMM:NF020939.2
GO:0043138 - 3'-5' DNA helicase activity [Evidence IEA]
GO:0006281 - DNA repair [Evidence IEA]; GO:0006260 - DNA replication [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00595.1
GO:0005658 - alpha DNA polymerase:primase complex [Evidence IEA]
GO:0003678 - DNA helicase activity [Evidence IEA]; GO:0003688 - DNA replication origin binding [Evidence IEA]; GO:0016818 - hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011344391.1
GO:0042586 - peptide deformylase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_015050517.1
GO:0004479 - methionyl-tRNA formyltransferase activity [Evidence IEA]
GO:0006431 - methionyl-tRNA aminoacylation [Evidence IEA]
COORDINATES: protein motif:HMM:NF011494.0
GO:0008168 - methyltransferase activity [Evidence IEA]; GO:0003723 - RNA binding [Evidence IEA]
GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]; GO:0001510 - RNA methylation [Evidence IEA]
16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB
COORDINATES: protein motif:HMM:TIGR00377.1
GO:0045152 - antisigma factor binding [Evidence IEA]
This anti-anti-sigma factor, or anti-sigma factor antagonist, belongs to a family that includes characterized members SpoIIAA, RsbV, RsfA, and RsfB; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_008677277.1
GO:0004672 - protein kinase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_015050687.1
GO:0003700 - DNA-binding transcription factor activity [Evidence IEA]; GO:0016987 - sigma factor activity [Evidence IEA]
SigB/SigF/SigG family RNA polymerase sigma factor
COORDINATES: protein motif:HMM:NF016623.2
divergent polysaccharide deacetylase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_015738882.1
COORDINATES: protein motif:HMM:TIGR02898.1
YhcN/YlaJ family sporulation lipoprotein
COORDINATES: similar to AA sequence:RefSeq:WP_011344494.1
polysaccharide deacetylase family sporulation protein PdaB
COORDINATES: protein motif:HMM:NF024804.2
COORDINATES: similar to AA sequence:RefSeq:WP_015739353.1
COORDINATES: similar to AA sequence:RefSeq:WP_015739352.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0003678 - DNA helicase activity [Evidence IEA]
DnaB-like helicase C-terminal domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_015739351.1
COORDINATES: protein motif:HMM:NF020811.2
COORDINATES: similar to AA sequence:RefSeq:WP_011344804.1
GO:0004412 - homoserine dehydrogenase activity [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00191.1
GO:0004413 - homoserine kinase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013412566.1
GO:0004072 - aspartate kinase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012995990.1
GO:0006166 - purine ribonucleoside salvage [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_002321950.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0003922 - GMP synthase (glutamine-hydrolyzing) activity [Evidence IEA]; GO:0016462 - pyrophosphatase activity [Evidence IEA]
GO:0006177 - GMP biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013821630.1
COORDINATES: protein motif:HMM:NF014912.2
GO:0046872 - metal ion binding [Evidence IEA]; GO:0016491 - oxidoreductase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF012304.2
GO:0003677 - DNA binding [Evidence IEA]; GO:0003723 - RNA binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013403960.1
GO:0008998 - ribonucleoside-triphosphate reductase activity [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR02495.1
GO:0051539 - 4 iron, 4 sulfur cluster binding [Evidence IEA]
GO:0009265 - 2'-deoxyribonucleotide biosynthetic process [Evidence IEA]; GO:0051353 - positive regulation of oxidoreductase activity [Evidence IEA]
anaerobic ribonucleoside-triphosphate reductase activating protein
COORDINATES: similar to AA sequence:RefSeq:WP_012996183.1
COORDINATES: similar to AA sequence:RefSeq:WP_013429322.1
COORDINATES: similar to AA sequence:RefSeq:WP_019907539.1
LytTR family DNA-binding domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_004401691.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0000155 - phosphorelay sensor kinase activity [Evidence IEA]; GO:0004673 - protein histidine kinase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF012760.2
GO:0016742 - hydroxymethyl-, formyl- and related transferase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF012515.2
COORDINATES: similar to AA sequence:RefSeq:WP_013757008.1
COORDINATES: similar to AA sequence:RefSeq:WP_009610322.1
COORDINATES: similar to AA sequence:RefSeq:WP_015739013.1
CoB--CoM heterodisulfide reductase iron-sulfur subunit A family protein
COORDINATES: similar to AA sequence:RefSeq:WP_015739012.1
COORDINATES: similar to AA sequence:RefSeq:WP_015739011.1
FaeA/PapI family transcriptional regulator
COORDINATES: protein motif:HMM:NF024585.2
RAMP superfamily CRISPR-associated protein
COORDINATES: protein motif:HMM:TIGR02682.1
COORDINATES: protein motif:HMM:NF037429.2
COORDINATES: similar to AA sequence:RefSeq:WP_015049942.1
GO:0046872 - metal ion binding [Evidence IEA]; GO:0030151 - molybdenum ion binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_015049943.1
GO:0032324 - molybdopterin cofactor biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_015049331.1
GO:0006777 - Mo-molybdopterin cofactor biosynthetic process [Evidence IEA]
cyclic pyranopterin monophosphate synthase MoaC
COORDINATES: similar to AA sequence:RefSeq:WP_011343735.1
MogA/MoaB family molybdenum cofactor biosynthesis protein
COORDINATES: protein motif:HMM:NF013915.2
GO:0008961 - phosphatidylglycerol-prolipoprotein diacylglyceryl transferase activity [Evidence IEA]
GO:0009249 - protein lipoylation [Evidence IEA]
prolipoprotein diacylglyceryl transferase
COORDINATES: protein motif:HMM:NF013086.2
adenylyl-sulfate reductase subunit alpha
COORDINATES: similar to AA sequence:RefSeq:WP_015049674.1
GO:0043190 - ATP-binding cassette (ABC) transporter complex [Evidence IEA]; GO:0016020 - membrane [Evidence IEA]
GO:0000041 - transition metal ion transport [Evidence IEA]
energy-coupling factor ABC transporter permease
COORDINATES: similar to AA sequence:RefSeq:WP_013298295.1
GO:0015087 - cobalt ion transmembrane transporter activity [Evidence IEA]
GO:0009236 - cobalamin biosynthetic process [Evidence IEA]; GO:0006824 - cobalt ion transport [Evidence IEA]
energy-coupling factor ABC transporter substrate-binding protein
COORDINATES: protein motif:HMM:NF014420.2
GO:0043190 - ATP-binding cassette (ABC) transporter complex [Evidence IEA]; GO:0005886 - plasma membrane [Evidence IEA]
GO:0032778 - P-type cobalt transporter activity [Evidence IEA]
GO:0006824 - cobalt ion transport [Evidence IEA]
COORDINATES: protein motif:HMM:NF000849.0
cobalt-precorrin-5B (C(1))-methyltransferase CbiD
COORDINATES: protein motif:HMM:TIGR02469.1
GO:0046025 - precorrin-6Y C5,15-methyltransferase (decarboxylating) activity [Evidence IEA]
GO:0046140 - corrin biosynthetic process [Evidence IEA]
precorrin-6Y C5,15-methyltransferase (decarboxylating) subunit CbiT
COORDINATES: protein motif:HMM:TIGR01467.1
GO:0030788 - precorrin-2 C20-methyltransferase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_015049681.1
GO:0046026 - precorrin-4 C11-methyltransferase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF014006.2
COORDINATES: similar to AA sequence:RefSeq:WP_015049683.1
GO:0030789 - precorrin-3B C17-methyltransferase activity [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00715.1
GO:0016994 - precorrin-6A reductase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF014016.2
CbiX/SirB N-terminal domain-containing protein
COORDINATES: protein motif:HMM:NF014612.2
COORDINATES: protein motif:HMM:NF015239.2
COORDINATES: similar to AA sequence:RefSeq:WP_015049562.1
COORDINATES: similar to AA sequence:RefSeq:WP_014062283.1
COORDINATES: similar to AA sequence:RefSeq:WP_013781951.1
COORDINATES: similar to AA sequence:RefSeq:WP_013150895.1
GO:0004784 - superoxide dismutase activity [Evidence IEA]
GO:0019430 - removal of superoxide radicals [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR01765.1
COORDINATES: similar to AA sequence:RefSeq:WP_015739770.1
COORDINATES: protein motif:HMM:NF001033.0
GO:0051082 - unfolded protein binding [Evidence IEA]
COORDINATES: protein motif:HMM:NF014657.2
COORDINATES: similar to AA sequence:RefSeq:WP_003868236.1
COORDINATES: protein motif:HMM:TIGR00182.1
GO:0043811 - phosphate:acyl-[acyl carrier protein] acyltransferase activity [Evidence IEA]
GO:0008610 - lipid biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013297973.1
GO:0004315 - 3-oxoacyl-[acyl-carrier-protein] synthase activity [Evidence IEA]; GO:0016746 - acyltransferase activity [Evidence IEA]; GO:0033818 - beta-ketoacyl-acyl-carrier-protein synthase III activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_009052431.1
GO:0004314 - [acyl-carrier-protein] S-malonyltransferase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013150368.1
GO:0004316 - 3-oxoacyl-[acyl-carrier-protein] reductase (NADPH) activity [Evidence IEA]
3-oxoacyl-[acyl-carrier-protein] reductase
COORDINATES: similar to AA sequence:RefSeq:WP_011917134.1
GO:0000036 - acyl carrier activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013756767.1
GO:0004315 - 3-oxoacyl-[acyl-carrier-protein] synthase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_003869194.1
GO:0004525 - ribonuclease III activity [Evidence IEA]
GO:0006396 - RNA processing [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011917147.1
GO:0003924 - GTPase activity [Evidence IEA]; GO:0005047 - signal recognition particle binding [Evidence IEA]
GO:0009306 - protein secretion [Evidence IEA]
signal recognition particle-docking protein FtsY
COORDINATES: similar to AA sequence:RefSeq:WP_011344348.1
GO:0017061 - S-methyl-5-thioadenosine phosphorylase activity [Evidence IEA]
GO:0006168 - adenine salvage [Evidence IEA]; GO:0019509 - L-methionine salvage from methylthioadenosine [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011344463.1
GO:0046523 - S-methyl-5-thioribose-1-phosphate isomerase activity [Evidence IEA]
GO:0019509 - L-methionine salvage from methylthioadenosine [Evidence IEA]
S-methyl-5-thioribose-1-phosphate isomerase
COORDINATES: similar to AA sequence:RefSeq:WP_013779976.1
GO:0004013 - adenosylhomocysteinase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_015050124.1
class II aldolase/adducin family protein
COORDINATES: similar to AA sequence:RefSeq:WP_015050125.1
COORDINATES: similar to AA sequence:RefSeq:WP_011344344.1
class I SAM-dependent rRNA methyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_015050979.1
COORDINATES: similar to AA sequence:RefSeq:WP_015051486.1
COORDINATES: similar to AA sequence:RefSeq:WP_009609711.1
TIGR02556 family CRISPR-associated protein
COORDINATES: similar to AA sequence:RefSeq:WP_009609719.1
type I-B CRISPR-associated protein Cas7/Csh2
COORDINATES: similar to AA sequence:RefSeq:WP_009609715.1
COORDINATES: similar to AA sequence:RefSeq:WP_009609694.1
CRISPR-associated helicase/endonuclease Cas3
COORDINATES: similar to AA sequence:RefSeq:WP_011026651.1
GO:0004518 - nuclease activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF020571.2
COORDINATES: protein motif:HMM:NF021207.2
TIGR02710 family CRISPR-associated CARF protein
COORDINATES: protein motif:HMM:TIGR02581.1
COORDINATES: protein motif:HMM:NF027889.2
COORDINATES: protein motif:HMM:NF018621.2
COORDINATES: protein motif:HMM:NF014669.2
COORDINATES: similar to AA sequence:RefSeq:WP_013298988.1
COORDINATES: protein motif:HMM:NF024829.2
COORDINATES: similar to AA sequence:RefSeq:WP_013298987.1
TetR/AcrR family transcriptional regulator
COORDINATES: protein motif:HMM:NF025066.2
COORDINATES: protein motif:HMM:NF017868.2
gamma-glutamylcyclotransferase family protein
COORDINATES: protein motif:HMM:NF014071.2
hydantoinase/oxoprolinase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_015738923.1
winged helix-turn-helix transcriptional regulator
COORDINATES: similar to AA sequence:RefSeq:WP_015738922.1
COORDINATES: similar to AA sequence:RefSeq:WP_015738921.1
COORDINATES: protein motif:HMM:TIGR03718.1
COORDINATES: similar to AA sequence:RefSeq:WP_015049857.1
GO:0009055 - electron transfer activity [Evidence IEA]; GO:0051536 - iron-sulfur cluster binding [Evidence IEA]; GO:0016491 - oxidoreductase activity [Evidence IEA]; GO:0016625 - oxidoreductase activity, acting on the aldehyde or oxo group of donors, iron-sulfur protein as acceptor [Evidence IEA]
aldehyde ferredoxin oxidoreductase C-terminal domain-containing protein
COORDINATES: protein motif:HMM:NF014636.2
COORDINATES: similar to AA sequence:RefSeq:WP_015049932.1
GO:0008641 - ubiquitin-like modifier activating enzyme activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_015050483.1
COORDINATES: protein motif:HMM:NF014619.2
COORDINATES: similar to AA sequence:RefSeq:WP_011344939.1
COORDINATES: similar to AA sequence:RefSeq:WP_013404258.1
GO:0055052 - ATP-binding cassette (ABC) transporter complex, substrate-binding subunit-containing [Evidence IEA]; GO:0009898 - cytoplasmic side of plasma membrane [Evidence IEA]
GO:0005524 - ATP binding [Evidence IEA]; GO:0015415 - ATPase-coupled phosphate ion transmembrane transporter activity [Evidence IEA]
phosphate ABC transporter ATP-binding protein PstB
COORDINATES: similar to AA sequence:RefSeq:WP_011344937.1
GO:0003700 - DNA-binding transcription factor activity [Evidence IEA]
GO:0051049 - regulation of transport [Evidence IEA]
phosphate signaling complex protein PhoU
COORDINATES: protein motif:HMM:TIGR00044.1
YggS family pyridoxal phosphate-dependent enzyme
COORDINATES: protein motif:HMM:NF016363.2
COORDINATES: protein motif:HMM:TIGR00112.1
GO:0004735 - pyrroline-5-carboxylate reductase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011344932.1
COORDINATES: protein motif:HMM:NF014633.2
COORDINATES: similar to AA sequence:RefSeq:WP_011343468.1
GO:0004822 - isoleucine-tRNA ligase activity [Evidence IEA]
GO:0006428 - isoleucyl-tRNA aminoacylation [Evidence IEA]
COORDINATES: protein motif:HMM:NF013618.2
lytic transglycosylase domain-containing protein
COORDINATES: protein motif:HMM:TIGR00152.1
GO:0004140 - dephospho-CoA kinase activity [Evidence IEA]
Dephospho-CoA kinase (CoaE) performs the final step in coenzyme A biosynthesis; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: protein motif:HMM:NF002211.1
GO:0008534 - oxidized purine nucleobase lesion DNA N-glycosylase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF004397.1
GO:0008408 - 3'-5' exonuclease activity [Evidence IEA]; GO:0003677 - DNA binding [Evidence IEA]; GO:0003887 - DNA-directed DNA polymerase activity [Evidence IEA]; GO:0003676 - nucleic acid binding [Evidence IEA]
GO:0006261 - DNA-templated DNA replication [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_015738244.1
COORDINATES: similar to AA sequence:RefSeq:WP_001995633.1
COORDINATES: similar to AA sequence:RefSeq:WP_015051684.1
COORDINATES: protein motif:HMM:NF020400.2
COORDINATES: protein motif:HMM:NF017221.2
COORDINATES: similar to AA sequence:RefSeq:WP_015049700.1
COORDINATES: protein motif:HMM:TIGR03177.1
COORDINATES: similar to AA sequence:RefSeq:WP_015050408.1
COORDINATES: similar to AA sequence:RefSeq:WP_015050902.1
GO:0030554 - adenyl nucleotide binding [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_015050052.1
COORDINATES: protein motif:HMM:NF006175.0
anti-sigma factor domain-containing protein
COORDINATES: protein motif:HMM:NF013827.2
rhomboid family intramembrane serine protease
COORDINATES: protein motif:HMM:NF028070.2
COORDINATES: similar to AA sequence:RefSeq:WP_015739176.1
COORDINATES: protein motif:HMM:NF015947.2
COORDINATES: protein motif:HMM:NF019958.2
COORDINATES: protein motif:HMM:NF019310.2
GO:0022857 - transmembrane transporter activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF013226.2
COORDINATES: protein motif:HMM:NF024083.2
COORDINATES: similar to AA sequence:RefSeq:WP_011343086.1
GO:0004478 - methionine adenosyltransferase activity [Evidence IEA]
GO:0006556 - S-adenosylmethionine biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF015048.2
GO:0047617 - acyl-CoA hydrolase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011344120.1
COORDINATES: similar to AA sequence:RefSeq:WP_011344121.1
COORDINATES: similar to AA sequence:RefSeq:WP_013756962.1
COORDINATES: protein motif:HMM:NF024247.2
COORDINATES: similar to AA sequence:RefSeq:WP_013756926.1
COORDINATES: similar to AA sequence:RefSeq:WP_013756927.1
COORDINATES: similar to AA sequence:RefSeq:WP_013822176.1
GO:0009973 - adenylyl-sulfate reductase activity [Evidence IEA]
GO:0019420 - dissimilatory sulfate reduction [Evidence IEA]; GO:0019424 - sulfide oxidation, using siroheme sulfite reductase [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013822175.1
COORDINATES: similar to AA sequence:RefSeq:WP_011343056.1
COORDINATES: protein motif:HMM:NF021507.2
COORDINATES: similar to AA sequence:RefSeq:WP_015312225.1
COORDINATES: similar to AA sequence:RefSeq:WP_003871055.1
COORDINATES: similar to AA sequence:RefSeq:WP_011344022.1
GO:0003677 - DNA binding [Evidence IEA]; GO:0003911 - DNA ligase (NAD+) activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012994710.1
GO:0030956 - glutamyl-tRNA(Gln) amidotransferase complex [Evidence IEA]
GO:0050567 - glutaminyl-tRNA synthase (glutamine-hydrolyzing) activity [Evidence IEA]
Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatC
COORDINATES: similar to AA sequence:RefSeq:WP_015050008.1
Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatA
COORDINATES: similar to AA sequence:RefSeq:WP_013755993.1
Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatB
COORDINATES: similar to AA sequence:RefSeq:WP_015049496.1
COORDINATES: similar to AA sequence:RefSeq:WP_011344026.1
GO:0004410 - homocitrate synthase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_015050012.1
COORDINATES: similar to AA sequence:RefSeq:WP_015050013.1
COORDINATES: similar to AA sequence:RefSeq:WP_014042539.1
isocitrate/isopropylmalate dehydrogenase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_014461314.1
GO:0015628 - protein secretion by the type II secretion system [Evidence IEA]
twin-arginine translocase TatA/TatE family subunit
nitrate/sulfonate/bicarbonate ABC transporter ATP-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_015739834.1
GO:0004592 - pantoate-beta-alanine ligase activity [Evidence IEA]
GO:0015940 - pantothenate biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF002677.0
GO:0003684 - damaged DNA binding [Evidence IEA]; GO:0003887 - DNA-directed DNA polymerase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011344255.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0008716 - D-alanine-D-alanine ligase activity [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_005588784.1
GO:0004139 - deoxyribose-phosphate aldolase activity [Evidence IEA]
GO:0009264 - deoxyribonucleotide catabolic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF015715.2
COORDINATES: protein motif:HMM:NF015513.2
COORDINATES: protein motif:HMM:NF003556.0
GO:0003871 - 5-methyltetrahydropteroyltriglutamate-homocysteine S-methyltransferase activity [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA]
GO:0008652 - amino acid biosynthetic process [Evidence IEA]; GO:0009086 - methionine biosynthetic process [Evidence IEA]
5-methyltetrahydropteroyltriglutamate-- homocysteine S-methyltransferase
COORDINATES: protein motif:HMM:NF012257.2
GO:0030552 - cAMP binding [Evidence IEA]; GO:0003700 - DNA-binding transcription factor activity [Evidence IEA]
Crp/Fnr family transcriptional regulator
COORDINATES: protein motif:HMM:NF024803.2
COORDINATES: protein motif:HMM:NF024880.2
GO:0008168 - methyltransferase activity [Evidence IEA]; GO:1904047 - S-adenosyl-L-methionine binding [Evidence IEA]
COORDINATES: protein motif:HMM:NF040075.1
COORDINATES: protein motif:HMM:NF033679.1
COORDINATES: protein motif:HMM:NF013259.2
COORDINATES: protein motif:HMM:NF016050.2
COORDINATES: protein motif:HMM:NF012383.2
phosphoribosyltransferase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_015049766.1
COORDINATES: similar to AA sequence:RefSeq:WP_015050275.1
GO:0003938 - IMP dehydrogenase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF014474.2
GO:0015093 - ferrous iron transmembrane transporter activity [Evidence IEA]; GO:0005525 - GTP binding [Evidence IEA]
GO:0055072 - iron ion homeostasis [Evidence IEA]; GO:0006811 - monoatomic ion transport [Evidence IEA]
COORDINATES: protein motif:HMM:NF024845.2
COORDINATES: protein motif:HMM:NF000907.0
GO:0051745 - 4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase activity [Evidence IEA]
GO:0050992 - dimethylallyl diphosphate biosynthetic process [Evidence IEA]; GO:0019288 - isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway [Evidence IEA]
bifunctional 4-hydroxy-3-methylbut-2-enyl diphosphate reductase/30S ribosomal protein S1
COORDINATES: similar to AA sequence:RefSeq:WP_011344818.1
lysophospholipid acyltransferase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_013781217.1
GO:0004127 - cytidylate kinase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_015050657.1
GO:0003866 - 3-phosphoshikimate 1-carboxyvinyltransferase activity [Evidence IEA]
3-phosphoshikimate 1-carboxyvinyltransferase
COORDINATES: protein motif:HMM:NF014234.2
COORDINATES: protein motif:HMM:NF008865.0
GO:0004664 - prephenate dehydratase activity [Evidence IEA]
GO:0009094 - L-phenylalanine biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_015907388.1
GO:0003849 - 3-deoxy-7-phosphoheptulonate synthase activity [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR01141.1
GO:0004400 - histidinol-phosphate transaminase activity [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00262.1
GO:0004834 - tryptophan synthase activity [Evidence IEA]
GO:0000162 - tryptophan biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011344486.1
COORDINATES: similar to AA sequence:RefSeq:WP_015051679.1
GO:0004640 - phosphoribosylanthranilate isomerase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF001377.0
GO:0004425 - indole-3-glycerol-phosphate synthase activity [Evidence IEA]
GO:0006568 - tryptophan metabolic process [Evidence IEA]
indole-3-glycerol phosphate synthase TrpC
COORDINATES: similar to AA sequence:RefSeq:WP_013780166.1
GO:0004048 - anthranilate phosphoribosyltransferase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011025819.1
GO:0046820 - 4-amino-4-deoxychorismate synthase activity [Evidence IEA]; GO:0004049 - anthranilate synthase activity [Evidence IEA]
aminodeoxychorismate/anthranilate synthase component II
COORDINATES: similar to AA sequence:RefSeq:WP_015051682.1
GO:0004049 - anthranilate synthase activity [Evidence IEA]
GO:0008324 - monoatomic cation transmembrane transporter activity [Evidence IEA]
GO:0006812 - monoatomic cation transport [Evidence IEA]; GO:0055085 - transmembrane transport [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_015740040.1
COORDINATES: protein motif:HMM:NF014610.2
COORDINATES: similar to AA sequence:RefSeq:WP_006569994.1
COORDINATES: protein motif:HMM:NF014563.2
COORDINATES: similar to AA sequence:RefSeq:WP_015739772.1
COORDINATES: similar to AA sequence:RefSeq:WP_015739957.1
COORDINATES: similar to AA sequence:RefSeq:WP_015739956.1
COORDINATES: similar to AA sequence:RefSeq:WP_015739955.1
COORDINATES: similar to AA sequence:RefSeq:WP_015739954.1
COORDINATES: protein motif:HMM:NF013540.2
COORDINATES: similar to AA sequence:RefSeq:WP_015739953.1
COORDINATES: similar to AA sequence:RefSeq:WP_015739172.1
COORDINATES: similar to AA sequence:RefSeq:WP_011345527.1
COORDINATES: similar to AA sequence:RefSeq:WP_015739910.1
COORDINATES: protein motif:HMM:NF025274.2
amino acid permease C-terminal domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_011026072.1
COORDINATES: protein motif:HMM:TIGR02822.1
zinc-dependent alcohol dehydrogenase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_003868051.1
COORDINATES: similar to AA sequence:RefSeq:WP_015049275.1
COORDINATES: similar to AA sequence:RefSeq:WP_015049274.1
iron ABC transporter substrate-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_014043148.1
COORDINATES: similar to AA sequence:RefSeq:WP_015738333.1
COORDINATES: protein motif:HMM:NF016750.2
molybdopterin oxidoreductase Fe4S4 region
COORDINATES: protein motif:HMM:NF021619.2
PocR ligand-binding domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_013779908.1
GO:0051539 - 4 iron, 4 sulfur cluster binding [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0004844 - uracil DNA N-glycosylase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012269719.1
COORDINATES: similar to AA sequence:RefSeq:WP_015050054.1
COORDINATES: protein motif:HMM:NF013188.2
GO:0006812 - monoatomic cation transport [Evidence IEA]; GO:1902600 - proton transmembrane transport [Evidence IEA]; GO:0055085 - transmembrane transport [Evidence IEA]
COORDINATES: protein motif:HMM:NF014171.2
GO:0006813 - potassium ion transport [Evidence IEA]
TrkA C-terminal domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_011026270.1
secondary thiamine-phosphate synthase enzyme YjbQ
COORDINATES: protein motif:HMM:TIGR01488.1
COORDINATES: protein motif:HMM:NF013143.2
GO:0030001 - metal ion transport [Evidence IEA]; GO:0055085 - transmembrane transport [Evidence IEA]
metal ABC transporter ATP-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_015051304.1
metal ABC transporter substrate-binding protein
COORDINATES: protein motif:HMM:NF013629.2
COORDINATES: similar to AA sequence:RefSeq:WP_011343469.1
COORDINATES: similar to AA sequence:RefSeq:WP_003867166.1
COORDINATES: similar to AA sequence:RefSeq:WP_013149787.1
GO:0016788 - hydrolase activity, acting on ester bonds [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011344176.1
COORDINATES: similar to AA sequence:RefSeq:WP_013403419.1
COORDINATES: protein motif:HMM:TIGR00023.1
GO:0008374 - O-acyltransferase activity [Evidence IEA]
GO:0006654 - phosphatidic acid biosynthetic process [Evidence IEA]
glycerol-3-phosphate 1-O-acyltransferase PlsY
COORDINATES: similar to AA sequence:RefSeq:WP_015050645.1
GO:0005525 - GTP binding [Evidence IEA]; GO:0003924 - GTPase activity [Evidence IEA]; GO:0043022 - ribosome binding [Evidence IEA]
COORDINATES: protein motif:HMM:NF016354.2
COORDINATES: protein motif:HMM:TIGR02867.1
COORDINATES: similar to AA sequence:RefSeq:WP_015050651.1
COORDINATES: similar to AA sequence:RefSeq:WP_011343790.1
COORDINATES: similar to AA sequence:RefSeq:WP_011343797.1
COORDINATES: similar to AA sequence:RefSeq:WP_015739752.1
COORDINATES: protein motif:HMM:TIGR00391.1
HyaD/HybD family hydrogenase maturation endopeptidase
COORDINATES: similar to AA sequence:RefSeq:WP_011344258.1
COORDINATES: similar to AA sequence:RefSeq:WP_015050145.1
COORDINATES: similar to AA sequence:RefSeq:WP_011344250.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0019205 - nucleobase-containing compound kinase activity [Evidence IEA]; GO:0016776 - phosphotransferase activity, phosphate group as acceptor [Evidence IEA]
GO:0006139 - nucleobase-containing compound metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013431292.1
COORDINATES: similar to AA sequence:RefSeq:WP_012268942.1
COORDINATES: similar to AA sequence:RefSeq:WP_013431569.1
[FeFe] hydrogenase H-cluster radical SAM maturase HydG
COORDINATES: similar to AA sequence:RefSeq:WP_013787036.1
[FeFe] hydrogenase H-cluster maturation GTPase HydF
COORDINATES: protein motif:HMM:TIGR03956.1
[FeFe] hydrogenase H-cluster radical SAM maturase HydE
COORDINATES: similar to AA sequence:RefSeq:WP_011344847.1
COORDINATES: similar to AA sequence:RefSeq:WP_003867998.1
COORDINATES: similar to AA sequence:RefSeq:WP_013780798.1
COORDINATES: similar to AA sequence:RefSeq:WP_011344850.1
COORDINATES: protein motif:HMM:NF017760.2
NADH-ubiquinone oxidoreductase-F iron-sulfur binding region domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_015050613.1
GO:0042286 - glutamate-1-semialdehyde 2,1-aminomutase activity [Evidence IEA]
glutamate-1-semialdehyde 2,1-aminomutase
COORDINATES: protein motif:HMM:NF037131.2
GO:0043565 - sequence-specific DNA binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011344130.1
putative heme d1 biosynthesis radical SAM protein NirJ2
COORDINATES: similar to AA sequence:RefSeq:WP_013756555.1
GO:0003824 - catalytic activity [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0004655 - porphobilinogen synthase activity [Evidence IEA]
GO:0033014 - tetrapyrrole biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_015050618.1
GO:0004851 - uroporphyrin-III C-methyltransferase activity [Evidence IEA]
GO:0019354 - siroheme biosynthetic process [Evidence IEA]
uroporphyrinogen-III C-methyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_011344127.1
GO:0004418 - hydroxymethylbilane synthase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF000744.0
GO:0008883 - glutamyl-tRNA reductase activity [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR01470.1
bifunctional precorrin-2 dehydrogenase/sirohydrochlorin ferrochelatase
COORDINATES: protein motif:HMM:NF012568.2
COORDINATES: protein motif:HMM:TIGR02890.1
COORDINATES: similar to AA sequence:RefSeq:WP_015050395.1
COORDINATES: protein motif:HMM:NF025401.2
COORDINATES: similar to AA sequence:RefSeq:WP_000139810.1
COORDINATES: protein motif:HMM:NF013362.2
GO:0008168 - methyltransferase activity [Evidence IEA]; GO:0003723 - RNA binding [Evidence IEA]; GO:1904047 - S-adenosyl-L-methionine binding [Evidence IEA]
RsmB/NOP family class I SAM-dependent RNA methyltransferase
COORDINATES: protein motif:HMM:TIGR02032.1
GO:0045550 - geranylgeranyl reductase activity [Evidence IEA]
GO:0030494 - bacteriochlorophyll biosynthetic process [Evidence IEA]; GO:0015995 - chlorophyll biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_009256459.1
COORDINATES: similar to AA sequence:RefSeq:WP_013787062.1
COORDINATES: similar to AA sequence:RefSeq:WP_011344418.1
GO:0031522 - cell envelope Sec protein transport complex [Evidence IEA]
GO:0015450 - protein-transporting ATPase activity [Evidence IEA]
GO:0043952 - protein transport by the Sec complex [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011344419.1
COORDINATES: similar to AA sequence:RefSeq:WP_015050342.1
COORDINATES: similar to AA sequence:RefSeq:WP_011344421.1
COORDINATES: similar to AA sequence:RefSeq:WP_003868516.1
GO:0008479 - queuine tRNA-ribosyltransferase activity [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR01297.1
GO:0015562 - efflux transmembrane transporter activity [Evidence IEA]; GO:0008324 - monoatomic cation transmembrane transporter activity [Evidence IEA]
GO:0006812 - monoatomic cation transport [Evidence IEA]
cation diffusion facilitator family transporter
COORDINATES: protein motif:HMM:NF016825.2
cyclodeaminase/cyclohydrolase family protein
COORDINATES: protein motif:HMM:NF014881.2
bifunctional 5,10-methylenetetrahydrofolate dehydrogenase/5,10-methenyltetrahydrofolate cyclohydrolase
COORDINATES: similar to AA sequence:RefSeq:WP_015050718.1
transcription antitermination factor NusB
COORDINATES: similar to AA sequence:RefSeq:WP_015050719.1
COORDINATES: protein motif:HMM:NF033218.1
alkaline shock response membrane anchor protein AmaP
COORDINATES: similar to AA sequence:RefSeq:WP_015050721.1
Asp23/Gls24 family envelope stress response protein
COORDINATES: similar to AA sequence:RefSeq:WP_000486723.1
GO:0003989 - acetyl-CoA carboxylase activity [Evidence IEA]; GO:0004075 - biotin carboxylase activity [Evidence IEA]
acetyl-CoA carboxylase biotin carboxylase subunit
COORDINATES: protein motif:HMM:NF006761.0
GO:0008948 - oxaloacetate decarboxylase activity [Evidence IEA]; GO:0015081 - sodium ion transmembrane transporter activity [Evidence IEA]
GO:0006814 - sodium ion transport [Evidence IEA]
sodium-extruding oxaloacetate decarboxylase subunit alpha
COORDINATES: protein motif:HMM:NF014625.2
GO:0019213 - deacetylase activity [Evidence IEA]
GO:0071111 - cyclic-guanylate-specific phosphodiesterase activity [Evidence IEA]
GGDEF domain-containing phosphodiesterase
COORDINATES: similar to AA sequence:RefSeq:WP_015050660.1
GO:0004106 - chorismate mutase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011344827.1
COORDINATES: similar to AA sequence:RefSeq:WP_011344830.1
GO:0009982 - pseudouridine synthase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_015050670.1
GO:0016798 - hydrolase activity, acting on glycosyl bonds [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00479.1
GO:0008649 - rRNA methyltransferase activity [Evidence IEA]
23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD
COORDINATES: similar to AA sequence:RefSeq:WP_015050671.1
COORDINATES: similar to AA sequence:RefSeq:WP_004396307.1
COORDINATES: protein motif:HMM:NF016326.2
COORDINATES: protein motif:HMM:NF022615.2
COORDINATES: similar to AA sequence:RefSeq:WP_013781068.1
GO:0004830 - tryptophan-tRNA ligase activity [Evidence IEA]
GO:0006436 - tryptophanyl-tRNA aminoacylation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_015050678.1
COORDINATES: protein motif:HMM:NF013871.2
COORDINATES: similar to AA sequence:RefSeq:WP_015050679.1
GO:0008836 - diaminopimelate decarboxylase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF009057.0
GO:0030170 - pyridoxal phosphate binding [Evidence IEA]; GO:0004834 - tryptophan synthase activity [Evidence IEA]
GO:0000162 - tryptophan biosynthetic process [Evidence IEA]; GO:0006568 - tryptophan metabolic process [Evidence IEA]
TrpB-like pyridoxal phosphate-dependent enzyme
COORDINATES: protein motif:HMM:NF037785.2
COORDINATES: similar to AA sequence:RefSeq:WP_015049748.1
redox-sensing transcriptional repressor Rex
COORDINATES: similar to AA sequence:RefSeq:WP_003869216.1
GO:0004750 - D-ribulose-phosphate 3-epimerase activity [Evidence IEA]
GO:0006098 - pentose-phosphate shunt [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00157.1
GO:0005525 - GTP binding [Evidence IEA]; GO:0043022 - ribosome binding [Evidence IEA]
ribosome small subunit-dependent GTPase A
COORDINATES: protein motif:HMM:NF012298.2
COORDINATES: protein motif:HMM:NF018884.2
GO:0004722 - protein serine/threonine phosphatase activity [Evidence IEA]
GO:0006470 - protein dephosphorylation [Evidence IEA]
Stp1/IreP family PP2C-type Ser/Thr phosphatase
COORDINATES: protein motif:HMM:TIGR00048.1
GO:0016433 - rRNA (adenine) methyltransferase activity [Evidence IEA]; GO:0008757 - S-adenosylmethionine-dependent methyltransferase activity [Evidence IEA]
23S rRNA (adenine(2503)-C(2))-methyltransferase RlmN
COORDINATES: protein motif:HMM:NF017913.2
phosphate-starvation-inducible PsiE family protein
COORDINATES: similar to AA sequence:RefSeq:WP_015050691.1
GO:0006206 - pyrimidine nucleobase metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011344855.1
GO:0000287 - magnesium ion binding [Evidence IEA]; GO:0008973 - phosphopentomutase activity [Evidence IEA]
GO:0043094 - cellular metabolic compound salvage [Evidence IEA]; GO:0009117 - nucleotide metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_015050693.1
GO:0009009 - site-specific recombinase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_015050699.1
COORDINATES: protein motif:HMM:NF017633.2
NFACT RNA binding domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_011343986.1
COORDINATES: protein motif:HMM:NF018004.2
COORDINATES: similar to AA sequence:RefSeq:WP_013412827.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0016887 - ATP hydrolysis activity [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011343857.1
COORDINATES: protein motif:HMM:NF024924.2
COORDINATES: similar to AA sequence:RefSeq:WP_013120809.1
COORDINATES: similar to AA sequence:RefSeq:WP_013822532.1
COORDINATES: similar to AA sequence:RefSeq:WP_011343852.1
CoB--CoM heterodisulfide reductase iron-sulfur subunit B family protein
COORDINATES: protein motif:HMM:NF024581.2
COORDINATES: similar to AA sequence:RefSeq:WP_015738849.1
COORDINATES: protein motif:HMM:NF013961.2
COORDINATES: protein motif:HMM:NF012774.2
COORDINATES: protein motif:HMM:NF012403.2
COORDINATES: protein motif:HMM:NF020926.2
GO:0005524 - ATP binding [Evidence IEA]; GO:0003676 - nucleic acid binding [Evidence IEA]
COORDINATES: protein motif:HMM:NF025454.2
COORDINATES: protein motif:HMM:NF023276.2
COORDINATES: protein motif:HMM:NF015630.2
COORDINATES: similar to AA sequence:RefSeq:WP_015049377.1
COORDINATES: similar to AA sequence:RefSeq:WP_015738896.1
COORDINATES: protein motif:HMM:NF017757.2
type II toxin-antitoxin system RelE/ParE family toxin
COORDINATES: similar to AA sequence:RefSeq:WP_003870232.1
COORDINATES: similar to AA sequence:RefSeq:WP_015738890.1
COORDINATES: similar to AA sequence:RefSeq:WP_015738889.1
COORDINATES: similar to AA sequence:RefSeq:WP_015738767.1
COORDINATES: similar to AA sequence:RefSeq:WP_013780132.1
GO:0051920 - peroxiredoxin activity [Evidence IEA]; GO:0008379 - thioredoxin peroxidase activity [Evidence IEA]
GO:0098869 - cellular oxidant detoxification [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_009052380.1
GO:0030170 - pyridoxal phosphate binding [Evidence IEA]; GO:0008483 - transaminase activity [Evidence IEA]
pyridoxal phosphate-dependent aminotransferase
COORDINATES: similar to AA sequence:RefSeq:WP_011344399.1
COORDINATES: similar to AA sequence:RefSeq:WP_015050527.1
GO:0008837 - diaminopimelate epimerase activity [Evidence IEA]
2-oxoacid:acceptor oxidoreductase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_013787198.1
GO:0003824 - catalytic activity [Evidence IEA]; GO:0030976 - thiamine pyrophosphate binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013297032.1
3-methyl-2-oxobutanoate dehydrogenase subunit VorB
COORDINATES: protein motif:HMM:NF024851.2
COORDINATES: protein motif:HMM:NF013146.2
COORDINATES: similar to AA sequence:RefSeq:WP_003871240.1
COORDINATES: protein motif:HMM:NF022824.2
GO:0055070 - copper ion homeostasis [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013570808.1
COORDINATES: similar to AA sequence:RefSeq:WP_013297801.1
GO:0000156 - phosphorelay response regulator activity [Evidence IEA]
GO:0030436 - asexual sporulation [Evidence IEA]; GO:0000160 - phosphorelay signal transduction system [Evidence IEA]; GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]; GO:0042173 - regulation of sporulation resulting in formation of a cellular spore [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR02860.1
COORDINATES: protein motif:HMM:TIGR00634.1
COORDINATES: similar to AA sequence:RefSeq:WP_015050708.1
GO:0006525 - arginine metabolic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF039482.1
COORDINATES: similar to AA sequence:RefSeq:WP_016125811.1
COORDINATES: similar to AA sequence:RefSeq:WP_012269317.1
GO:0008661 - 1-deoxy-D-xylulose-5-phosphate synthase activity [Evidence IEA]
GO:0009240 - isopentenyl diphosphate biosynthetic process [Evidence IEA]; GO:0008615 - pyridoxine biosynthetic process [Evidence IEA]; GO:0009228 - thiamine biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_015050713.1
COORDINATES: similar to AA sequence:RefSeq:WP_013402193.1
COORDINATES: similar to AA sequence:RefSeq:WP_013291301.1
COORDINATES: protein motif:HMM:TIGR00368.1
YifB family Mg chelatase-like AAA ATPase
COORDINATES: protein motif:HMM:NF024931.2
magnesium chelatase domain-containing protein
COORDINATES: protein motif:HMM:NF009150.0
GO:0004518 - nuclease activity [Evidence IEA]; GO:0003676 - nucleic acid binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_015050134.1
GO:0003723 - RNA binding [Evidence IEA]; GO:0004523 - RNA-DNA hybrid ribonuclease activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011025534.1
GO:0051539 - 4 iron, 4 sulfur cluster binding [Evidence IEA]; GO:0016869 - intramolecular transferase activity, transferring amino groups [Evidence IEA]; GO:0030170 - pyridoxal phosphate binding [Evidence IEA]; GO:1904047 - S-adenosyl-L-methionine binding [Evidence IEA]
GO:0006536 - glutamate metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_009611058.1
COORDINATES: similar to AA sequence:RefSeq:WP_015050132.1
GO:0009306 - protein secretion [Evidence IEA]; GO:0006465 - signal peptide processing [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011344335.1
COORDINATES: similar to AA sequence:RefSeq:WP_010691543.1
GO:0052906 - tRNA (guanine(37)-N(1))-methyltransferase activity [Evidence IEA]
tRNA (guanosine(37)-N1)-methyltransferase TrmD
COORDINATES: protein motif:HMM:TIGR02273.1
Essential for efficient processing of 16S rRNA; Essential for efficient processing of 16S rRNA; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: protein motif:HMM:NF022519.2
COORDINATES: similar to AA sequence:RefSeq:WP_003866680.1
COORDINATES: similar to AA sequence:RefSeq:WP_011025728.1
COORDINATES: similar to AA sequence:RefSeq:WP_011344341.1
GO:0048501 - signal recognition particle, plasma membrane targeting [Evidence IEA]
GO:0003924 - GTPase activity [Evidence IEA]; GO:0005048 - signal sequence binding [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR01054.1
GO:0003678 - DNA helicase activity [Evidence IEA]; GO:0003916 - DNA topoisomerase activity [Evidence IEA]; GO:0003917 - DNA topoisomerase type I (single strand cut, ATP-independent) activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_003867825.1
aspartate aminotransferase family protein
COORDINATES: protein motif:HMM:TIGR00040.1
COORDINATES: similar to AA sequence:RefSeq:WP_015050330.1
COORDINATES: protein motif:HMM:NF020476.2
COORDINATES: protein motif:HMM:TIGR01583.1
GO:0009055 - electron transfer activity [Evidence IEA]; GO:0008863 - formate dehydrogenase (NAD+) activity [Evidence IEA]
GO:0009061 - anaerobic respiration [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_015050891.1
COORDINATES: similar to AA sequence:RefSeq:WP_015050892.1
COORDINATES: similar to AA sequence:RefSeq:WP_015050893.1
COORDINATES: nucleotide motif:Rfam:14.4:RF00162
SAM riboswitch class I; Derived by automated computational analysis using gene prediction method: cmsearch.
COORDINATES: similar to AA sequence:RefSeq:WP_015738511.1
COORDINATES: protein motif:HMM:NF013100.2
COORDINATES: protein motif:HMM:TIGR00247.1
GO:0008932 - lytic endotransglycosylase activity [Evidence IEA]
GO:0071555 - cell wall organization [Evidence IEA]; GO:0009252 - peptidoglycan biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF016202.2
COORDINATES: similar to AA sequence:RefSeq:WP_011343477.1
COORDINATES: similar to AA sequence:RefSeq:WP_003869797.1
COORDINATES: similar to AA sequence:RefSeq:WP_013297744.1
COORDINATES: similar to AA sequence:RefSeq:WP_009052311.1
GO:0004813 - alanine-tRNA ligase activity [Evidence IEA]
GO:0006419 - alanyl-tRNA aminoacylation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011343549.1
GO:0016987 - sigma factor activity [Evidence IEA]
GO:0006352 - DNA-templated transcription initiation [Evidence IEA]; GO:0042173 - regulation of sporulation resulting in formation of a cellular spore [Evidence IEA]
RNA polymerase sporulation sigma factor SigK
SEC-C metal-binding domain-containing protein
COORDINATES: protein motif:HMM:NF015692.2
ADP-ribosylglycohydrolase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_015049605.1
GO:0005247 - voltage-gated chloride channel activity [Evidence IEA]
GO:0006821 - chloride transport [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011344700.1
COORDINATES: similar to AA sequence:RefSeq:WP_011344701.1
GO:0008412 - 4-hydroxybenzoate octaprenyltransferase activity [Evidence IEA]
GO:0006744 - ubiquinone biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_015311824.1
GO:0016831 - carboxy-lyase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011344703.1
COORDINATES: similar to AA sequence:RefSeq:WP_015050635.1
GO:0004014 - adenosylmethionine decarboxylase activity [Evidence IEA]
COORDINATES: nucleotide motif:Rfam:14.4:RF01734
Fluoride riboswitches increase expression of downstream genes that help mitigate the toxic effects of very high levels of fluoride; They are found in a wide variety of bacteria and archaea; Derived by automated computational analysis using gene prediction method: cmsearch.
COORDINATES: similar to AA sequence:RefSeq:WP_011344999.1
COORDINATES: protein motif:HMM:NF025030.2
COORDINATES: similar to AA sequence:RefSeq:WP_015051750.1
COORDINATES: similar to AA sequence:RefSeq:WP_011344096.1
COORDINATES: protein motif:HMM:NF013117.2
GO:0008381 - mechanosensitive monoatomic ion channel activity [Evidence IEA]
mechanosensitive ion channel family protein
COORDINATES: similar to AA sequence:RefSeq:WP_015050274.1
GO:0043755 - alpha-ribazole phosphatase activity [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR01140.1
GO:0048472 - threonine-phosphate decarboxylase activity [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00317.1
GO:0008818 - cobalamin 5'-phosphate synthase activity [Evidence IEA]
adenosylcobinamide-GDP ribazoletransferase
COORDINATES: protein motif:HMM:TIGR00380.1
GO:0016880 - acid-ammonia (or amide) ligase activity [Evidence IEA]
adenosylcobinamide-phosphate synthase CbiB
COORDINATES: similar to AA sequence:RefSeq:WP_015050055.1
COORDINATES: protein motif:HMM:NF014826.2
COORDINATES: protein motif:HMM:NF013413.2
GO:0046872 - metal ion binding [Evidence IEA]; GO:0070573 - metallodipeptidase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_003866776.1
COORDINATES: similar to AA sequence:RefSeq:WP_011344091.1
GO:0042578 - phosphoric ester hydrolase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_016290694.1
GO:0006402 - mRNA catabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011343599.1
COORDINATES: protein motif:HMM:NF017964.2
COORDINATES: protein motif:HMM:TIGR02115.1
GO:0031004 - potassium ion-transporting ATPase complex [Evidence IEA]
GO:0008556 - P-type potassium transmembrane transporter activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013787649.1
potassium-transporting ATPase subunit KdpA
COORDINATES: similar to AA sequence:RefSeq:WP_013756191.1
potassium-transporting ATPase subunit KdpB
COORDINATES: similar to AA sequence:RefSeq:WP_004400565.1
potassium-transporting ATPase subunit KdpC
COORDINATES: protein motif:HMM:NF014728.2
COORDINATES: protein motif:HMM:TIGR00361.1
GO:0009290 - DNA import into cell involved in transformation [Evidence IEA]
DNA internalization-related competence protein ComEC/Rec2
COORDINATES: protein motif:HMM:NF018247.2
COORDINATES: protein motif:HMM:NF016154.2
COORDINATES: protein motif:HMM:NF014684.2
GO:0015803 - branched-chain amino acid transport [Evidence IEA]
branched-chain amino acid ABC transporter permease
COORDINATES: protein motif:HMM:NF024825.2
COORDINATES: similar to AA sequence:RefSeq:WP_015049407.1
COORDINATES: similar to AA sequence:RefSeq:WP_015049789.1
carbon-nitrogen hydrolase family protein
COORDINATES: nucleotide motif:Rfam:14.4:RF00023
COORDINATES: similar to AA sequence:RefSeq:WP_011343238.1
COORDINATES: similar to AA sequence:RefSeq:WP_015051590.1
COORDINATES: similar to AA sequence:RefSeq:WP_011917762.1
GO:0022625 - cytosolic large ribosomal subunit [Evidence IEA]; GO:0005762 - mitochondrial large ribosomal subunit [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011345163.1
GO:0003677 - DNA binding [Evidence IEA]; GO:0003899 - DNA-directed 5'-3' RNA polymerase activity [Evidence IEA]; GO:0046983 - protein dimerization activity [Evidence IEA]
DNA-directed RNA polymerase subunit alpha
COORDINATES: similar to AA sequence:RefSeq:WP_015908138.1
GO:0015935 - small ribosomal subunit [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011917765.1
COORDINATES: similar to AA sequence:RefSeq:WP_011345166.1
GO:0022627 - cytosolic small ribosomal subunit [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_003720928.1
COORDINATES: similar to AA sequence:RefSeq:WP_012039277.1
COORDINATES: similar to AA sequence:RefSeq:WP_015051598.1
KOW domain-containing RNA-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_015051599.1
COORDINATES: similar to AA sequence:RefSeq:WP_011345171.1
COORDINATES: similar to AA sequence:RefSeq:WP_004225266.1
COORDINATES: similar to AA sequence:RefSeq:WP_002356220.1
COORDINATES: similar to AA sequence:RefSeq:WP_013290166.1
GO:0022627 - cytosolic small ribosomal subunit [Evidence IEA]; GO:0000312 - plastid small ribosomal subunit [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012268641.1
COORDINATES: similar to AA sequence:RefSeq:WP_012268994.1
GO:0022625 - cytosolic large ribosomal subunit [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_010742763.1
COORDINATES: similar to AA sequence:RefSeq:WP_011917778.1
COORDINATES: similar to AA sequence:RefSeq:WP_013290162.1
COORDINATES: similar to AA sequence:RefSeq:WP_009607843.1
COORDINATES: similar to AA sequence:RefSeq:WP_007073026.1
COORDINATES: similar to AA sequence:RefSeq:WP_011345182.1
COORDINATES: similar to AA sequence:RefSeq:WP_003870259.1
COORDINATES: similar to AA sequence:RefSeq:WP_013781749.1
COORDINATES: similar to AA sequence:RefSeq:WP_000529946.1
COORDINATES: similar to AA sequence:RefSeq:WP_011345186.1
COORDINATES: similar to AA sequence:RefSeq:WP_011393933.1
COORDINATES: similar to AA sequence:RefSeq:WP_015051617.1
COORDINATES: similar to AA sequence:RefSeq:WP_003870263.1
COORDINATES: similar to AA sequence:RefSeq:WP_015051619.1
COORDINATES: similar to AA sequence:RefSeq:WP_002351833.1
COORDINATES: similar to AA sequence:RefSeq:WP_012084982.1
GO:0003723 - RNA binding [Evidence IEA]; GO:0003735 - structural constituent of ribosome [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013296974.1
COORDINATES: similar to AA sequence:RefSeq:WP_013054923.1
COORDINATES: similar to AA sequence:RefSeq:WP_003868702.1
COORDINATES: similar to AA sequence:RefSeq:WP_011345198.1
ribosomal L7Ae/L30e/S12e/Gadd45 family protein
COORDINATES: similar to AA sequence:RefSeq:WP_011916512.1
DNA-directed RNA polymerase subunit beta'
COORDINATES: similar to AA sequence:RefSeq:WP_004402358.1
DNA-directed RNA polymerase subunit beta
COORDINATES: similar to AA sequence:RefSeq:WP_011343288.1
GO:0000910 - cytokinesis [Evidence IEA]; GO:0000918 - division septum site selection [Evidence IEA]
cell division topological specificity factor MinE
COORDINATES: similar to AA sequence:RefSeq:WP_013290542.1
GO:0000918 - division septum site selection [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR03423.1
COORDINATES: protein motif:HMM:NF016019.2
GO:0008360 - regulation of cell shape [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00219.1
COORDINATES: similar to AA sequence:RefSeq:WP_011343281.1
GO:0000902 - cell morphogenesis [Evidence IEA]; GO:0008360 - regulation of cell shape [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012268775.1
COORDINATES: similar to AA sequence:RefSeq:WP_003866929.1
COORDINATES: protein motif:HMM:NF025572.2
COORDINATES: similar to AA sequence:RefSeq:WP_011343821.1
COORDINATES: similar to AA sequence:RefSeq:WP_015050381.1
COORDINATES: similar to AA sequence:RefSeq:WP_016728903.1
anaerobic ribonucleoside-triphosphate reductase
COORDINATES: similar to AA sequence:RefSeq:WP_009052539.1
COORDINATES: similar to AA sequence:RefSeq:WP_015739921.1
COORDINATES: protein motif:HMM:TIGR02837.1
COORDINATES: similar to AA sequence:RefSeq:WP_004402381.1
RNA polymerase sporulation sigma factor SigG
COORDINATES: similar to AA sequence:RefSeq:WP_009610361.1
RNA polymerase sporulation sigma factor SigE
COORDINATES: protein motif:HMM:TIGR02854.1
COORDINATES: similar to AA sequence:RefSeq:WP_013781200.1
COORDINATES: similar to AA sequence:RefSeq:WP_011344954.1
COORDINATES: protein motif:HMM:NF017734.2
COORDINATES: protein motif:HMM:NF015739.2
FtsQ-type POTRA domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_011345408.1
GO:0008760 - UDP-N-acetylglucosamine 1-carboxyvinyltransferase activity [Evidence IEA]
UDP-N-acetylglucosamine 1-carboxyvinyltransferase
COORDINATES: protein motif:HMM:NF010480.0
GO:0071949 - FAD binding [Evidence IEA]; GO:0008762 - UDP-N-acetylmuramate dehydrogenase activity [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR01082.1
GO:0008763 - UDP-N-acetylmuramate-L-alanine ligase activity [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR01133.1
GO:0050511 - undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase activity [Evidence IEA]
undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_015050365.1
GO:0051301 - cell division [Evidence IEA]; GO:0009252 - peptidoglycan biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_015050364.1
GO:0008764 - UDP-N-acetylmuramoylalanine-D-glutamate ligase activity [Evidence IEA]
UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase
COORDINATES: protein motif:HMM:TIGR00445.1
GO:0008963 - phospho-N-acetylmuramoyl-pentapeptide-transferase activity [Evidence IEA]
phospho-N-acetylmuramoyl-pentapeptide- transferase
COORDINATES: protein motif:HMM:TIGR01143.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0047480 - UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D-alanine ligase activity [Evidence IEA]
UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D- alanine ligase
COORDINATES: protein motif:HMM:NF001124.0
GO:0005524 - ATP binding [Evidence IEA]; GO:0016874 - ligase activity [Evidence IEA]
GO:0009058 - biosynthetic process [Evidence IEA]; GO:0051301 - cell division [Evidence IEA]; GO:0008360 - regulation of cell shape [Evidence IEA]
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2, 6-diaminopimelate ligase
COORDINATES: similar to AA sequence:RefSeq:WP_015050360.1
GO:0030436 - asexual sporulation [Evidence IEA]; GO:0009252 - peptidoglycan biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF016860.2
COORDINATES: similar to AA sequence:RefSeq:WP_002414733.1
GO:0016434 - rRNA (cytosine) methyltransferase activity [Evidence IEA]
16S rRNA (cytosine(1402)-N(4))-methyltransferase RsmH
COORDINATES: similar to AA sequence:RefSeq:WP_011344971.1
GO:0051302 - regulation of cell division [Evidence IEA]
division/cell wall cluster transcriptional repressor MraZ
COORDINATES: similar to AA sequence:RefSeq:WP_011344437.1
COORDINATES: similar to AA sequence:RefSeq:WP_013788292.1
COORDINATES: protein motif:HMM:TIGR01128.1
COORDINATES: protein motif:HMM:TIGR00106.1
COORDINATES: protein motif:HMM:NF016228.2
GO:0008831 - dTDP-4-dehydrorhamnose reductase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013780134.1
GO:0004459 - L-lactate dehydrogenase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012995081.1
GO:0016853 - isomerase activity [Evidence IEA]; GO:0016740 - transferase activity [Evidence IEA]
tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA
COORDINATES: similar to AA sequence:RefSeq:WP_015738657.1
COORDINATES: protein motif:HMM:NF020287.2
COORDINATES: protein motif:HMM:NF014017.2
COORDINATES: protein motif:HMM:TIGR02666.1
COORDINATES: protein motif:HMM:NF014687.2
COORDINATES: protein motif:HMM:NF012711.2
COORDINATES: similar to AA sequence:RefSeq:WP_012203085.1
COORDINATES: protein motif:HMM:NF024850.2
COORDINATES: similar to AA sequence:RefSeq:WP_013755515.1
COORDINATES: protein motif:HMM:NF014680.2
COORDINATES: protein motif:HMM:NF003160.0
2,3-bisphosphoglycerate-independent phosphoglycerate mutase
COORDINATES: protein motif:HMM:NF022395.2
COORDINATES: protein motif:HMM:NF014709.2
COORDINATES: similar to AA sequence:RefSeq:WP_013297728.1
GO:0009982 - pseudouridine synthase activity [Evidence IEA]; GO:0003723 - RNA binding [Evidence IEA]
GO:0001522 - pseudouridine synthesis [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00077.1
GO:0009306 - protein secretion [Evidence IEA]; GO:0006508 - proteolysis [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_015738519.1
COORDINATES: similar to AA sequence:RefSeq:WP_015738452.1
COORDINATES: similar to AA sequence:RefSeq:WP_011343297.1
COORDINATES: similar to AA sequence:RefSeq:WP_013755847.1
GO:0004427 - inorganic diphosphate phosphatase activity [Evidence IEA]
manganese-dependent inorganic pyrophosphatase
COORDINATES: similar to AA sequence:RefSeq:WP_015049830.1
COORDINATES: similar to AA sequence:RefSeq:WP_003867207.1
GO:0004634 - phosphopyruvate hydratase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011343230.1
GO:0004807 - triose-phosphate isomerase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011343229.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0004618 - phosphoglycerate kinase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013430275.1
GO:0006094 - gluconeogenesis [Evidence IEA]; GO:0019682 - glyceraldehyde-3-phosphate metabolic process [Evidence IEA]; GO:0006096 - glycolytic process [Evidence IEA]
type I glyceraldehyde-3-phosphate dehydrogenase
COORDINATES: protein motif:HMM:NF009118.0
COORDINATES: protein motif:HMM:TIGR00647.1
GO:0043937 - regulation of sporulation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013781475.1
COORDINATES: protein motif:HMM:NF012562.2
COORDINATES: protein motif:HMM:TIGR03156.1
COORDINATES: similar to AA sequence:RefSeq:WP_011025388.1
LysM peptidoglycan-binding domain-containing protein
COORDINATES: protein motif:HMM:TIGR02669.1
COORDINATES: similar to AA sequence:RefSeq:WP_011344427.1
COORDINATES: similar to AA sequence:RefSeq:WP_013432412.1
COORDINATES: similar to AA sequence:RefSeq:WP_015050333.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0003677 - DNA binding [Evidence IEA]; GO:0009378 - four-way junction helicase activity [Evidence IEA]
Holliday junction branch migration DNA helicase RuvB
COORDINATES: protein motif:HMM:TIGR00084.1
GO:0009379 - Holliday junction helicase complex [Evidence IEA]
GO:0009378 - four-way junction helicase activity [Evidence IEA]
Holliday junction branch migration protein RuvA
COORDINATES: similar to AA sequence:RefSeq:WP_013781504.1
GO:0008821 - crossover junction endodeoxyribonuclease activity [Evidence IEA]
crossover junction endodeoxyribonuclease RuvC
COORDINATES: similar to AA sequence:RefSeq:WP_015050889.1
YebC/PmpR family DNA-binding transcriptional regulator
COORDINATES: protein motif:HMM:TIGR00552.1
GO:0008795 - NAD+ synthase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_015050081.1
COORDINATES: protein motif:HMM:NF013219.2
COORDINATES: similar to AA sequence:RefSeq:WP_015051547.1
COORDINATES: similar to AA sequence:RefSeq:WP_015051548.1
MotA/TolQ/ExbB proton channel family protein
COORDINATES: similar to AA sequence:RefSeq:WP_015739181.1
COORDINATES: protein motif:HMM:NF013648.2
COORDINATES: protein motif:HMM:NF004646.0
COORDINATES: similar to AA sequence:RefSeq:WP_013781264.1
GO:0004824 - lysine-tRNA ligase activity [Evidence IEA]
GO:0006430 - lysyl-tRNA aminoacylation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_016180609.1
GO:0003677 - DNA binding [Evidence IEA]; GO:0070063 - RNA polymerase binding [Evidence IEA]
GO:0032784 - regulation of DNA-templated transcription elongation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013296923.1
COORDINATES: similar to AA sequence:RefSeq:WP_015050244.1
COORDINATES: similar to AA sequence:RefSeq:WP_013297881.1
GO:0004170 - dUTP diphosphatase activity [Evidence IEA]; GO:0000287 - magnesium ion binding [Evidence IEA]
GO:0006226 - dUMP biosynthetic process [Evidence IEA]; GO:0046081 - dUTP catabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_015050243.1
COORDINATES: similar to AA sequence:RefSeq:WP_015050240.1
GO:0004654 - polyribonucleotide nucleotidyltransferase activity [Evidence IEA]; GO:0003723 - RNA binding [Evidence IEA]
GO:0006402 - mRNA catabolic process [Evidence IEA]; GO:0006396 - RNA processing [Evidence IEA]
polyribonucleotide nucleotidyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_011275926.1
COORDINATES: protein motif:HMM:NF004160.0
GO:0003919 - FMN adenylyltransferase activity [Evidence IEA]
bifunctional riboflavin kinase/FAD synthetase
COORDINATES: protein motif:HMM:TIGR00431.1
GO:0004730 - pseudouridylate synthase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF013528.2
GO:0008441 - 3'(2'),5'-bisphosphate nucleotidase activity [Evidence IEA]; GO:0004527 - exonuclease activity [Evidence IEA]; GO:0003676 - nucleic acid binding [Evidence IEA]
bifunctional oligoribonuclease/PAP phosphatase NrnA
COORDINATES: similar to AA sequence:RefSeq:WP_015050235.1
GO:0019843 - rRNA binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011344660.1
COORDINATES: protein motif:HMM:NF013417.2
COORDINATES: similar to AA sequence:RefSeq:WP_011344662.1
COORDINATES: similar to AA sequence:RefSeq:WP_011344663.1
COORDINATES: similar to AA sequence:RefSeq:WP_011344664.1
GO:0000028 - ribosomal small subunit assembly [Evidence IEA]; GO:0042274 - ribosomal small subunit biogenesis [Evidence IEA]; GO:0006412 - translation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013779924.1
GO:0015036 - disulfide oxidoreductase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011343484.1
COORDINATES: similar to AA sequence:RefSeq:WP_013780245.1
GO:0004829 - threonine-tRNA ligase activity [Evidence IEA]
GO:0006435 - threonyl-tRNA aminoacylation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011024833.1
GO:0008080 - N-acetyltransferase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011024832.1
GO:0005436 - sodium:phosphate symporter activity [Evidence IEA]
GO:0044341 - sodium-dependent phosphate transport [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013780562.1
GO:0004812 - aminoacyl-tRNA ligase activity [Evidence IEA]; GO:0005524 - ATP binding [Evidence IEA]; GO:0016874 - ligase activity [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]
GO:0006418 - tRNA aminoacylation for protein translation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_015050351.1
GO:0004821 - histidine-tRNA ligase activity [Evidence IEA]
GO:0006427 - histidyl-tRNA aminoacylation [Evidence IEA]
COORDINATES: protein motif:HMM:NF013530.2
COORDINATES: similar to AA sequence:RefSeq:WP_015311511.1
GO:0004540 - ribonuclease activity [Evidence IEA]; GO:0003723 - RNA binding [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA]
COORDINATES: protein motif:HMM:NF024097.2
COORDINATES: protein motif:HMM:NF021121.2
COORDINATES: protein motif:HMM:TIGR02829.1
COORDINATES: similar to AA sequence:RefSeq:WP_015050728.1
COORDINATES: similar to AA sequence:RefSeq:WP_011344897.1
COORDINATES: protein motif:HMM:NF021090.2
COORDINATES: protein motif:HMM:NF040318.1
COORDINATES: similar to AA sequence:RefSeq:WP_015049596.1
COORDINATES: similar to AA sequence:RefSeq:WP_011343414.1
GO:0008939 - nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase activity [Evidence IEA]
nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_009610651.1
COORDINATES: similar to AA sequence:RefSeq:WP_011343530.1
COORDINATES: protein motif:HMM:TIGR02832.1
COORDINATES: similar to AA sequence:RefSeq:WP_015050901.1
GO:0004831 - tyrosine-tRNA ligase activity [Evidence IEA]
GO:0006437 - tyrosyl-tRNA aminoacylation [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR03599.1
COORDINATES: protein motif:HMM:NF014679.2
GO:0005504 - fatty acid binding [Evidence IEA]
COORDINATES: protein motif:HMM:NF024891.2
COORDINATES: protein motif:HMM:TIGR02717.1
COORDINATES: protein motif:HMM:NF019128.2
COORDINATES: protein motif:HMM:NF012529.2
COORDINATES: protein motif:HMM:NF004469.0
GO:0043752 - adenosylcobinamide kinase activity [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]
bifunctional adenosylcobinamide kinase/adenosylcobinamide-phosphate guanylyltransferase
COORDINATES: protein motif:HMM:NF016213.2
COORDINATES: similar to AA sequence:RefSeq:WP_015050077.1
GO:0008047 - enzyme activator activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF017828.2
2-hydroxyacyl-CoA dehydratase family protein
COORDINATES: protein motif:HMM:NF013348.2
COORDINATES: protein motif:HMM:NF040111.1
COORDINATES: similar to AA sequence:RefSeq:WP_011343228.1
COORDINATES: protein motif:HMM:NF003166.0
GO:0004781 - sulfate adenylyltransferase (ATP) activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_015050739.1
COORDINATES: protein motif:HMM:NF016253.2
GO:0043683 - type IV pilus assembly [Evidence IEA]; GO:0043107 - type IV pilus-dependent motility [Evidence IEA]
COORDINATES: protein motif:HMM:NF016992.2
COORDINATES: protein motif:HMM:TIGR01175.1
GO:0009297 - pilus assembly [Evidence IEA]
pilus assembly PilX N-terminal domain-containing protein
COORDINATES: protein motif:HMM:TIGR02532.1
prepilin-type N-terminal cleavage/methylation domain-containing protein
COORDINATES: protein motif:HMM:NF019934.2
COORDINATES: similar to AA sequence:RefSeq:WP_015050748.1
COORDINATES: similar to AA sequence:RefSeq:WP_013412487.1
GO:0043107 - type IV pilus-dependent motility [Evidence IEA]
type IV pilus twitching motility protein PilT
COORDINATES: similar to AA sequence:RefSeq:WP_012995122.1
GO:0015627 - type II protein secretion system complex [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011916445.1
GO:0003677 - DNA binding [Evidence IEA]; GO:0016987 - sigma factor activity [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR01391.1
GO:0003896 - DNA primase activity [Evidence IEA]
GO:0006269 - DNA replication, synthesis of RNA primer [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011916443.1
GO:0016793 - triphosphoric monoester hydrolase activity [Evidence IEA]
deoxyguanosinetriphosphate triphosphohydrolase
COORDINATES: protein motif:HMM:TIGR02258.1
GO:0008664 - 2'-5'-RNA ligase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF005057.0
GO:0005524 - ATP binding [Evidence IEA]; GO:0008986 - pyruvate, water dikinase activity [Evidence IEA]; GO:0016772 - transferase activity, transferring phosphorus-containing groups [Evidence IEA]
GO:0016310 - phosphorylation [Evidence IEA]; GO:0006090 - pyruvate metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011343379.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0016776 - phosphotransferase activity, phosphate group as acceptor [Evidence IEA]; GO:0004674 - protein serine/threonine kinase activity [Evidence IEA]
GO:0006470 - protein dephosphorylation [Evidence IEA]; GO:0006468 - protein phosphorylation [Evidence IEA]
pyruvate, water dikinase regulatory protein
COORDINATES: similar to AA sequence:RefSeq:WP_011343378.1
COORDINATES: similar to AA sequence:RefSeq:WP_015049733.1
GO:0009345 - glycine-tRNA ligase complex [Evidence IEA]
GO:0004820 - glycine-tRNA ligase activity [Evidence IEA]
GO:0006426 - glycyl-tRNA aminoacylation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011343376.1
COORDINATES: protein motif:HMM:TIGR00613.1
COORDINATES: protein motif:HMM:NF020123.2
COORDINATES: protein motif:HMM:NF012787.2
GO:0016209 - antioxidant activity [Evidence IEA]; GO:0016491 - oxidoreductase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF024211.2
COORDINATES: similar to AA sequence:RefSeq:WP_015738312.1
IS200/IS605 family element transposase accessory protein TnpB
COORDINATES: protein motif:HMM:NF015639.2
COORDINATES: similar to AA sequence:RefSeq:WP_011916529.1
GO:0051536 - iron-sulfur cluster binding [Evidence IEA]; GO:0016491 - oxidoreductase activity [Evidence IEA]; GO:0016625 - oxidoreductase activity, acting on the aldehyde or oxo group of donors, iron-sulfur protein as acceptor [Evidence IEA]
aldehyde ferredoxin oxidoreductase N-terminal domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_015051296.1
GO:0003677 - DNA binding [Evidence IEA]; GO:0016888 - endodeoxyribonuclease activity, producing 5'-phosphomonoesters [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA]
COORDINATES: protein motif:HMM:NF024903.2
COORDINATES: protein motif:HMM:NF014624.2
metal-sensitive transcriptional regulator
COORDINATES: protein motif:HMM:NF024867.2
COORDINATES: protein motif:HMM:NF024258.2
COORDINATES: protein motif:HMM:NF014044.2
COORDINATES: protein motif:HMM:NF020933.2
DNA double-strand break repair nuclease NurA
COORDINATES: protein motif:HMM:NF025716.2
COORDINATES: similar to AA sequence:RefSeq:WP_011343125.1
GO:0008452 - RNA ligase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_015050930.1
GO:0008784 - alanine racemase activity [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00196.1
GO:0052855 - ADP-dependent NAD(P)H-hydrate dehydratase activity [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00516.1
GO:0008897 - holo-[acyl-carrier-protein] synthase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011343589.1
COORDINATES: similar to AA sequence:RefSeq:WP_011343588.1
GO:0000155 - phosphorelay sensor kinase activity [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR01511.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0019829 - ATPase-coupled monoatomic cation transmembrane transporter activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_015050968.1
type I-A CRISPR-associated protein Cas4/Csa1
COORDINATES: similar to AA sequence:RefSeq:WP_015050969.1
COORDINATES: similar to AA sequence:RefSeq:WP_015050970.1
COORDINATES: protein motif:HMM:TIGR00287.1
GO:0004520 - endodeoxyribonuclease activity [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]
COORDINATES: protein motif:HMM:NF022376.2
DUF2791 family P-loop domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_015050972.1
COORDINATES: similar to AA sequence:RefSeq:WP_015050973.1
COORDINATES: similar to AA sequence:RefSeq:WP_015050974.1
type I-D CRISPR-associated protein Cas7/Csc2
COORDINATES: similar to AA sequence:RefSeq:WP_015050975.1
COORDINATES: similar to AA sequence:RefSeq:WP_015050977.1
COORDINATES: similar to AA sequence:RefSeq:WP_015050978.1
COORDINATES: protein motif:HMM:NF024676.2
COORDINATES: similar to AA sequence:RefSeq:WP_015050980.1
CRISPR system precrRNA processing endoribonuclease RAMP protein Cas6
COORDINATES: protein motif:HMM:NF016925.2
COORDINATES: similar to AA sequence:RefSeq:WP_014062655.1
NADH-dependent [FeFe] hydrogenase, group A6
COORDINATES: similar to AA sequence:RefSeq:WP_013840288.1
COORDINATES: similar to AA sequence:RefSeq:WP_015739442.1
COORDINATES: similar to AA sequence:RefSeq:WP_012302140.1
COORDINATES: protein motif:HMM:NF016270.2
COORDINATES: similar to AA sequence:RefSeq:WP_015738581.1
COORDINATES: protein motif:HMM:NF006375.0
GO:0003677 - DNA binding [Evidence IEA]; GO:0003887 - DNA-directed DNA polymerase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_015051320.1
COORDINATES: protein motif:HMM:NF011016.0
COORDINATES: similar to AA sequence:RefSeq:WP_015738216.1
COORDINATES: similar to AA sequence:RefSeq:WP_013756999.1
COORDINATES: similar to AA sequence:RefSeq:WP_011343330.1
GO:0004823 - leucine-tRNA ligase activity [Evidence IEA]
GO:0006429 - leucyl-tRNA aminoacylation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_015739165.1
COORDINATES: protein motif:HMM:NF013767.2
COORDINATES: similar to AA sequence:RefSeq:WP_011025410.1
COORDINATES: similar to AA sequence:RefSeq:WP_011025411.1
COORDINATES: similar to AA sequence:RefSeq:WP_014063553.1
COORDINATES: similar to AA sequence:RefSeq:WP_014063551.1
COORDINATES: protein motif:HMM:NF004139.0
50S ribosomal protein L25/general stress protein Ctc
COORDINATES: protein motif:HMM:NF037241.2
COORDINATES: similar to AA sequence:RefSeq:WP_015050899.1
COORDINATES: protein motif:HMM:NF012692.2
COORDINATES: protein motif:HMM:TIGR00099.1
COORDINATES: protein motif:HMM:NF001824.0
GO:0009380 - excinuclease repair complex [Evidence IEA]
GO:0009381 - excinuclease ABC activity [Evidence IEA]
GO:0006289 - nucleotide-excision repair [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_016099277.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0016887 - ATP hydrolysis activity [Evidence IEA]; GO:0003677 - DNA binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013297162.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0016887 - ATP hydrolysis activity [Evidence IEA]; GO:0003677 - DNA binding [Evidence IEA]; GO:0016787 - hydrolase activity [Evidence IEA]; GO:0005515 - protein binding [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00838.1
GO:0004056 - argininosuccinate lyase activity [Evidence IEA]
GO:0042450 - arginine biosynthetic process via ornithine [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_019908076.1
GO:0004055 - argininosuccinate synthase activity [Evidence IEA]; GO:0005524 - ATP binding [Evidence IEA]
GO:0006526 - arginine biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011345143.1
GO:0004585 - ornithine carbamoyltransferase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013787024.1
COORDINATES: similar to AA sequence:RefSeq:WP_011345145.1
GO:0003991 - acetylglutamate kinase activity [Evidence IEA]
GO:0006592 - ornithine biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011345146.1
GO:0004358 - glutamate N-acetyltransferase activity [Evidence IEA]
bifunctional glutamate N-acetyltransferase/amino-acid acetyltransferase ArgJ
COORDINATES: protein motif:HMM:TIGR01850.1
GO:0003942 - N-acetyl-gamma-glutamyl-phosphate reductase activity [Evidence IEA]
N-acetyl-gamma-glutamyl-phosphate reductase
COORDINATES: similar to AA sequence:RefSeq:WP_012995064.1
COORDINATES: protein motif:HMM:TIGR00858.1
GO:0008710 - 8-amino-7-oxononanoate synthase activity [Evidence IEA]
GO:0009102 - biotin biosynthetic process [Evidence IEA]
GO:0004141 - dethiobiotin synthase activity [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00433.2
GO:0051537 - 2 iron, 2 sulfur cluster binding [Evidence IEA]; GO:0051539 - 4 iron, 4 sulfur cluster binding [Evidence IEA]; GO:0004076 - biotin synthase activity [Evidence IEA]; GO:1904047 - S-adenosyl-L-methionine binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_015050143.1
COORDINATES: similar to AA sequence:RefSeq:WP_015050041.1
GO:0030288 - outer membrane-bounded periplasmic space [Evidence IEA]
GO:0050380 - undecaprenyl-diphosphatase activity [Evidence IEA]
GO:0009252 - peptidoglycan biosynthetic process [Evidence IEA]; GO:0046677 - response to antibiotic [Evidence IEA]
COORDINATES: protein motif:HMM:NF001208.0
GO:0003987 - acetate-CoA ligase activity [Evidence IEA]
GO:0019427 - acetyl-CoA biosynthetic process from acetate [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011345256.1
COORDINATES: protein motif:HMM:NF013122.2
GO:0004527 - exonuclease activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF015410.2
GO:0008773 - [protein-PII] uridylyltransferase activity [Evidence IEA]
DUF294 nucleotidyltransferase-like domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_011344925.1
GO:0015370 - solute:sodium symporter activity [Evidence IEA]
Members of the Solute:Sodium Symporter (SSS), TC 2.A.21 as described in tcdb.org, catalyze solute:Na+ symport. Known solutes for members of the family include sugars, amino acids, nucleosides, inositols, vitamins, urea or anions, depending on the system.; Members of the Solute:Sodium Symporter (SSS), TC 2.A.21 as described in tcdb.org, catalyze solute:Na+ symport. Known solutes for members of the family include sugars, amino acids, nucleosides, inositols, vitamins, urea or anions, depending on the system; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: protein motif:HMM:NF016244.2
COORDINATES: similar to AA sequence:RefSeq:WP_011343590.1
COORDINATES: similar to AA sequence:RefSeq:WP_011343831.1
COORDINATES: protein motif:HMM:NF013757.2
COORDINATES: protein motif:HMM:NF016296.2
COORDINATES: similar to AA sequence:RefSeq:WP_003867202.1
COORDINATES: similar to AA sequence:RefSeq:WP_011344383.1
COORDINATES: similar to AA sequence:RefSeq:WP_015738690.1
COORDINATES: similar to AA sequence:RefSeq:WP_015738499.1
COORDINATES: similar to AA sequence:RefSeq:WP_006569371.1
COORDINATES: protein motif:HMM:NF005655.0
COORDINATES: similar to AA sequence:RefSeq:WP_013755793.1
GO:0016984 - ribulose-bisphosphate carboxylase activity [Evidence IEA]
type III ribulose-bisphosphate carboxylase
COORDINATES: similar to AA sequence:RefSeq:WP_013430193.1
COORDINATES: similar to AA sequence:RefSeq:WP_011024720.1
COORDINATES: protein motif:HMM:TIGR00737.1
GO:0003824 - catalytic activity [Evidence IEA]; GO:0050660 - flavin adenine dinucleotide binding [Evidence IEA]; GO:0016491 - oxidoreductase activity [Evidence IEA]; GO:0017150 - tRNA dihydrouridine synthase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_015051687.1
COORDINATES: similar to AA sequence:RefSeq:WP_015049256.1
MerR family DNA-binding transcriptional regulator
COORDINATES: protein motif:HMM:TIGR00121.1
GO:0004077 - biotin-[acetyl-CoA-carboxylase] ligase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013780768.1
GO:0004514 - nicotinate-nucleotide diphosphorylase (carboxylating) activity [Evidence IEA]
GO:0019363 - pyridine nucleotide biosynthetic process [Evidence IEA]
carboxylating nicotinate-nucleotide diphosphorylase
COORDINATES: similar to AA sequence:RefSeq:WP_015051690.1
GO:0008734 - L-aspartate oxidase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011345244.1
COORDINATES: similar to AA sequence:RefSeq:WP_013291053.1
GO:0004068 - aspartate 1-decarboxylase activity [Evidence IEA]
GO:0006523 - alanine biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013291054.1
COORDINATES: similar to AA sequence:RefSeq:WP_011345247.1
GO:0003864 - 3-methyl-2-oxobutanoate hydroxymethyltransferase activity [Evidence IEA]
3-methyl-2-oxobutanoate hydroxymethyltransferase
COORDINATES: protein motif:HMM:NF022188.2
Rossmann-like and DUF2520 domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_011025944.1
COORDINATES: similar to AA sequence:RefSeq:WP_011343205.1
GO:0070403 - NAD+ binding [Evidence IEA]; GO:0017136 - NAD-dependent histone deacetylase activity [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR01498.1
GO:0003848 - 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase activity [Evidence IEA]
GO:0009396 - folic acid-containing compound biosynthetic process [Evidence IEA]
2-amino-4-hydroxy-6- hydroxymethyldihydropteridine diphosphokinase
COORDINATES: similar to AA sequence:RefSeq:WP_013780788.1
GO:0004156 - dihydropteroate synthase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014957885.1
COORDINATES: similar to AA sequence:RefSeq:WP_013788571.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0003952 - NAD+ synthase (glutamine-hydrolyzing) activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_019907444.1
COORDINATES: similar to AA sequence:RefSeq:WP_009053036.1
COORDINATES: protein motif:HMM:TIGR00836.1
GO:0008519 - ammonium transmembrane transporter activity [Evidence IEA]
GO:0072488 - ammonium transmembrane transport [Evidence IEA]
COORDINATES: protein motif:HMM:NF015799.2
COORDINATES: similar to AA sequence:RefSeq:WP_015049973.1
COORDINATES: protein motif:HMM:NF014398.2
GO:0042597 - periplasmic space [Evidence IEA]
GO:0042279 - nitrite reductase (cytochrome, ammonia-forming) activity [Evidence IEA]
ammonia-forming cytochrome c nitrite reductase subunit c552
COORDINATES: protein motif:HMM:TIGR03153.1
cytochrome c nitrite reductase small subunit
COORDINATES: protein motif:HMM:TIGR03144.1
GO:0020037 - heme binding [Evidence IEA]
GO:0017004 - cytochrome complex assembly [Evidence IEA]
c-type cytochrome biogenesis protein CcsB
COORDINATES: protein motif:HMM:NF016995.2
COORDINATES: similar to AA sequence:RefSeq:WP_015738669.1
COORDINATES: protein motif:HMM:NF023273.2
COORDINATES: protein motif:HMM:NF014651.2
COORDINATES: protein motif:HMM:NF024644.2
respiratory nitrate reductase subunit beta
COORDINATES: similar to AA sequence:RefSeq:WP_008602464.1
COORDINATES: protein motif:HMM:NF013069.2
COORDINATES: protein motif:HMM:TIGR02442.1
COORDINATES: similar to AA sequence:RefSeq:WP_015051696.1
COORDINATES: nucleotide motif:Rfam:14.4:RF00230
T-box leader; Derived by automated computational analysis using gene prediction method: cmsearch.
COORDINATES: protein motif:HMM:NF018058.2
COORDINATES: similar to AA sequence:RefSeq:WP_015049629.1
GO:0004791 - thioredoxin-disulfide reductase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_006570422.1
COORDINATES: similar to AA sequence:RefSeq:WP_011344300.1
COORDINATES: similar to AA sequence:RefSeq:WP_013781532.1
GO:0052381 - tRNA dimethylallyltransferase activity [Evidence IEA]
tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA
COORDINATES: protein motif:HMM:NF016340.2
GO:0008990 - rRNA (guanine-N2-)-methyltransferase activity [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00585.2
GO:0006298 - mismatch repair [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011344304.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0030983 - mismatched DNA binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014063496.1
COORDINATES: similar to AA sequence:RefSeq:WP_011345203.1
GO:0015934 - large ribosomal subunit [Evidence IEA]
COORDINATES: nucleotide motif:Rfam:14.4:RF00557
ribosomal protein L10 leader region; Derived by automated computational analysis using gene prediction method: cmsearch.
COORDINATES: similar to AA sequence:RefSeq:WP_011345204.1
COORDINATES: similar to AA sequence:RefSeq:WP_013430156.1
COORDINATES: similar to AA sequence:RefSeq:WP_011303841.1
transcription termination/antitermination protein NusG
COORDINATES: protein motif:HMM:TIGR00964.1
COORDINATES: similar to AA sequence:RefSeq:WP_001265708.1
COORDINATES: protein motif:HMM:NF013607.2
GO:0030612 - arsenate reductase (thioredoxin) activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_015050876.1
GO:0008490 - arsenite secondary active transmembrane transporter activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011343742.1
COORDINATES: protein motif:HMM:NF033788.1
metalloregulator ArsR/SmtB family transcription factor
COORDINATES: similar to AA sequence:RefSeq:WP_015051175.1
histidine triad nucleotide-binding protein
GO:0051539 - 4 iron, 4 sulfur cluster binding [Evidence IEA]; GO:1904047 - S-adenosyl-L-methionine binding [Evidence IEA]; GO:0008172 - S-methyltransferase activity [Evidence IEA]; GO:0016782 - transferase activity, transferring sulphur-containing groups [Evidence IEA]
GO:0018339 - peptidyl-L-beta-methylthioaspartic acid biosynthetic process from peptidyl-aspartic acid [Evidence IEA]
30S ribosomal protein S12 methylthiotransferase RimO
COORDINATES: protein motif:HMM:NF024855.2
COORDINATES: similar to AA sequence:RefSeq:WP_011344080.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0003677 - DNA binding [Evidence IEA]; GO:0015616 - DNA translocase activity [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR03936.1
TIGR03936 family radical SAM-associated protein
COORDINATES: similar to AA sequence:RefSeq:WP_011343301.1
TIGR03960 family B12-binding radical SAM protein
COORDINATES: similar to AA sequence:RefSeq:WP_015049537.1
ATP-dependent Clp protease ATP-binding subunit
COORDINATES: similar to AA sequence:RefSeq:WP_015049536.1
GO:0016301 - kinase activity [Evidence IEA]
GO:0046314 - phosphocreatine biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_003868421.1
COORDINATES: protein motif:HMM:NF017648.2
COORDINATES: similar to AA sequence:RefSeq:WP_013787537.1
GO:0004549 - tRNA-specific ribonuclease activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011343261.1
GO:0047429 - nucleoside triphosphate diphosphatase activity [Evidence IEA]
GO:0009143 - nucleoside triphosphate catabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_015050419.1
GO:0003824 - catalytic activity [Evidence IEA]; GO:0051536 - iron-sulfur cluster binding [Evidence IEA]
COORDINATES: protein motif:HMM:NF015649.2
COORDINATES: similar to AA sequence:RefSeq:WP_012269717.1
COORDINATES: similar to AA sequence:RefSeq:WP_011024724.1
COORDINATES: protein motif:HMM:NF002898.0
GO:0003862 - 3-isopropylmalate dehydrogenase activity [Evidence IEA]; GO:0000287 - magnesium ion binding [Evidence IEA]; GO:0051287 - NAD binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011025358.1
COORDINATES: similar to AA sequence:RefSeq:WP_015739522.1
COORDINATES: protein motif:HMM:TIGR01695.1
GO:0034204 - lipid translocation [Evidence IEA]; GO:0009252 - peptidoglycan biosynthetic process [Evidence IEA]
murein biosynthesis integral membrane protein MurJ
COORDINATES: similar to AA sequence:RefSeq:WP_015049696.1
phosphoglucomutase/phosphomannomutase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_011345447.1
COORDINATES: similar to AA sequence:RefSeq:WP_019907474.1
COORDINATES: similar to AA sequence:RefSeq:WP_019907508.1
GO:0003983 - UTP:glucose-1-phosphate uridylyltransferase activity [Evidence IEA]
GO:0009225 - nucleotide-sugar metabolic process [Evidence IEA]
UTP--glucose-1-phosphate uridylyltransferase GalU
COORDINATES: similar to AA sequence:RefSeq:WP_013779927.1
COORDINATES: protein motif:HMM:TIGR00350.1
GO:0070726 - cell wall assembly [Evidence IEA]
COORDINATES: protein motif:HMM:NF025582.2
COORDINATES: protein motif:HMM:NF021504.2
acyl-CoA dehydratase activase-related protein
COORDINATES: similar to AA sequence:RefSeq:WP_019907926.1
COORDINATES: similar to AA sequence:RefSeq:WP_013788153.1
COORDINATES: similar to AA sequence:RefSeq:WP_015050492.1
GO:0009349 - riboflavin synthase complex [Evidence IEA]
GO:0000906 - 6,7-dimethyl-8-ribityllumazine synthase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_008394621.1
GO:0008686 - 3,4-dihydroxy-2-butanone-4-phosphate synthase activity [Evidence IEA]; GO:0003935 - GTP cyclohydrolase II activity [Evidence IEA]
bifunctional 3,4-dihydroxy-2-butanone-4-phosphate synthase/GTP cyclohydrolase II
COORDINATES: similar to AA sequence:RefSeq:WP_015050494.1
COORDINATES: similar to AA sequence:RefSeq:WP_016124967.1
GO:0008703 - 5-amino-6-(5-phosphoribosylamino)uracil reductase activity [Evidence IEA]; GO:0008835 - diaminohydroxyphosphoribosylaminopyrimidine deaminase activity [Evidence IEA]
bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD
COORDINATES: similar to AA sequence:RefSeq:WP_015051116.1
COORDINATES: similar to AA sequence:RefSeq:WP_011345122.1
COORDINATES: protein motif:HMM:NF027890.2
COORDINATES: protein motif:HMM:NF025015.2
COORDINATES: protein motif:HMM:NF033789.1
autorepressor SdpR family transcription factor
COORDINATES: protein motif:HMM:NF022338.2
COORDINATES: similar to AA sequence:RefSeq:WP_015739174.1
COORDINATES: similar to AA sequence:RefSeq:WP_015739169.1
COORDINATES: similar to AA sequence:RefSeq:WP_015739168.1
COORDINATES: similar to AA sequence:RefSeq:WP_015739167.1
COORDINATES: protein motif:HMM:NF024082.2
COORDINATES: similar to AA sequence:RefSeq:WP_011344444.1
hydrogenase expression/formation protein HypE
COORDINATES: protein motif:HMM:TIGR00075.1
GO:0016530 - metallochaperone activity [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00074.1
HypC/HybG/HupF family hydrogenase formation chaperone
COORDINATES: protein motif:HMM:TIGR00143.1
GO:0003998 - acylphosphatase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_015051713.1
GO:0016530 - metallochaperone activity [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]
hydrogenase nickel incorporation protein HypB
COORDINATES: protein motif:HMM:NF013334.2
GO:0008901 - ferredoxin hydrogenase activity [Evidence IEA]
hydrogenase maturation nickel metallochaperone HypA
COORDINATES: similar to AA sequence:RefSeq:WP_012302733.1
COORDINATES: protein motif:HMM:NF013242.2
COORDINATES: similar to AA sequence:RefSeq:WP_012302735.1
COORDINATES: protein motif:HMM:NF005995.1
GO:0009425 - bacterial-type flagellum basal body [Evidence IEA]; GO:0016020 - membrane [Evidence IEA]
GO:0003774 - cytoskeletal motor activity [Evidence IEA]
GO:0071973 - bacterial-type flagellum-dependent cell motility [Evidence IEA]; GO:0006935 - chemotaxis [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011343942.1
COORDINATES: similar to AA sequence:RefSeq:WP_011343941.1
COORDINATES: protein motif:HMM:NF025070.2
COORDINATES: protein motif:HMM:NF013867.2
GO:0008168 - methyltransferase activity [Evidence IEA]; GO:0008983 - protein-glutamate O-methyltransferase activity [Evidence IEA]; GO:0016740 - transferase activity [Evidence IEA]
protein-glutamate O-methyltransferase CheR
COORDINATES: similar to AA sequence:RefSeq:WP_011343938.1
COORDINATES: protein motif:HMM:TIGR03506.1
COORDINATES: protein motif:HMM:NF012674.2
COORDINATES: protein motif:HMM:NF005413.0
GO:0003677 - DNA binding [Evidence IEA]; GO:0003899 - DNA-directed 5'-3' RNA polymerase activity [Evidence IEA]; GO:0016987 - sigma factor activity [Evidence IEA]
FliA/WhiG family RNA polymerase sigma factor
COORDINATES: protein motif:HMM:NF018894.2
GO:0035438 - cyclic-di-GMP binding [Evidence IEA]
COORDINATES: protein motif:HMM:NF022077.2
COORDINATES: protein motif:HMM:NF012662.2
COORDINATES: similar to AA sequence:RefSeq:WP_015050205.1
COORDINATES: protein motif:HMM:TIGR00328.1
COORDINATES: protein motif:HMM:NF013478.2
COORDINATES: similar to AA sequence:RefSeq:WP_005232782.1
COORDINATES: similar to AA sequence:RefSeq:WP_014043059.1
The bacterial flagellar biogenesis protein FliP forms a type III secretion system (T3SS)-type pore required for flagellar assembly; Derived by automated computational analysis using gene prediction method: Protein Homology.
flagellar type III secretion system pore protein FliP
COORDINATES: protein motif:HMM:TIGR03500.1
GO:0044781 - bacterial-type flagellum organization [Evidence IEA]
COORDINATES: protein motif:HMM:NF013236.2
FliM/FliN family flagellar motor switch protein
COORDINATES: protein motif:HMM:NF015693.2
flagellar basal body-associated FliL family protein
COORDINATES: similar to AA sequence:RefSeq:WP_003869166.1
flagellar hook-basal body complex protein
COORDINATES: protein motif:HMM:NF015896.2
flagellar hook capping FlgD N-terminal domain-containing protein
COORDINATES: protein motif:HMM:NF014207.2
flagellar hook-length control protein FliK
COORDINATES: protein motif:HMM:NF014144.2
COORDINATES: similar to AA sequence:RefSeq:WP_012995289.1
COORDINATES: protein motif:HMM:NF014196.2
COORDINATES: similar to AA sequence:RefSeq:WP_011343917.1
GO:0009433 - bacterial-type flagellum basal body, C ring [Evidence IEA]
GO:0006935 - chemotaxis [Evidence IEA]; GO:0001539 - cilium or flagellum-dependent cell motility [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00206.1
GO:0009431 - bacterial-type flagellum basal body, MS ring [Evidence IEA]
flagellar basal-body MS-ring/collar protein FliF
COORDINATES: protein motif:HMM:TIGR00205.1
flagellar hook-basal body complex protein FliE
COORDINATES: similar to AA sequence:RefSeq:WP_013788108.1
GO:0009425 - bacterial-type flagellum basal body [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR01396.1
GO:0009429 - bacterial-type flagellum basal body, proximal rod [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_015050831.1
COORDINATES: protein motif:HMM:NF013227.2
GO:0008483 - transaminase activity [Evidence IEA]
DegT/DnrJ/EryC1/StrS family aminotransferase
COORDINATES: protein motif:HMM:NF020084.2
FIST N-terminal domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_015051273.1
basic amino acid ABC transporter substrate-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_015051274.1
COORDINATES: similar to AA sequence:RefSeq:WP_012994636.1
amino acid ABC transporter ATP-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_006569599.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0004329 - formate-tetrahydrofolate ligase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011343163.1
GO:0004550 - nucleoside diphosphate kinase activity [Evidence IEA]
GO:0006165 - nucleoside diphosphate phosphorylation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_015051709.1
GO:0016887 - ATP hydrolysis activity [Evidence IEA]; GO:0004222 - metalloendopeptidase activity [Evidence IEA]
GO:0051301 - cell division [Evidence IEA]; GO:0006508 - proteolysis [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR02432.1
GO:0016879 - ligase activity, forming carbon-nitrogen bonds [Evidence IEA]
COORDINATES: protein motif:HMM:NF039380.1
GO:0016791 - phosphatase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF014587.2
COORDINATES: protein motif:HMM:TIGR00070.1
GO:0003879 - ATP phosphoribosyltransferase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF016839.2
septum formation initiator family protein
COORDINATES: similar to AA sequence:RefSeq:WP_015051722.1
GO:0006352 - DNA-templated transcription initiation [Evidence IEA]; GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
sigma factor-like helix-turn-helix DNA-binding protein
COORDINATES: protein motif:HMM:NF019488.2
COORDINATES: similar to AA sequence:RefSeq:WP_016292434.1
COORDINATES: protein motif:HMM:NF037081.2
GO:0030261 - chromosome condensation [Evidence IEA]
COORDINATES: protein motif:HMM:NF007113.1
nucleoside triphosphate pyrophosphohydrolase
COORDINATES: similar to AA sequence:RefSeq:WP_003870433.1
GO:0030436 - asexual sporulation [Evidence IEA]; GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00580.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0016887 - ATP hydrolysis activity [Evidence IEA]; GO:0003690 - double-stranded DNA binding [Evidence IEA]; GO:0005515 - protein binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011343144.1
COORDINATES: protein motif:HMM:NF013725.2
COORDINATES: similar to AA sequence:RefSeq:WP_015738328.1
COORDINATES: similar to AA sequence:RefSeq:WP_015051857.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0016301 - kinase activity [Evidence IEA]; GO:0000287 - magnesium ion binding [Evidence IEA]; GO:0004749 - ribose phosphate diphosphokinase activity [Evidence IEA]
GO:0006015 - 5-phosphoribose 1-diphosphate biosynthetic process [Evidence IEA]; GO:0009165 - nucleotide biosynthetic process [Evidence IEA]; GO:0016310 - phosphorylation [Evidence IEA]; GO:0009156 - ribonucleoside monophosphate biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011343140.1
GO:0019134 - glucosamine-1-phosphate N-acetyltransferase activity [Evidence IEA]; GO:0000287 - magnesium ion binding [Evidence IEA]; GO:0003977 - UDP-N-acetylglucosamine diphosphorylase activity [Evidence IEA]
GO:0009252 - peptidoglycan biosynthetic process [Evidence IEA]; GO:0006048 - UDP-N-acetylglucosamine biosynthetic process [Evidence IEA]
bifunctional UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase GlmU
COORDINATES: protein motif:HMM:NF040786.1
selenium metabolism-associated LysR family transcriptional regulator
COORDINATES: similar to AA sequence:RefSeq:WP_015050999.1
YedE family putative selenium transporter
COORDINATES: protein motif:HMM:NF013379.2
COORDINATES: similar to AA sequence:RefSeq:WP_015739948.1
COORDINATES: similar to AA sequence:RefSeq:WP_015739158.1
COORDINATES: protein motif:HMM:TIGR02605.1
COORDINATES: protein motif:HMM:NF024824.2
COORDINATES: protein motif:HMM:NF020263.2
dissimilatory sulfite reductase D family protein
COORDINATES: similar to AA sequence:RefSeq:WP_011345279.1
GO:0018551 - hydrogensulfite reductase activity [Evidence IEA]
GO:0019420 - dissimilatory sulfate reduction [Evidence IEA]
dissimilatory-type sulfite reductase subunit beta
COORDINATES: similar to AA sequence:RefSeq:WP_011345280.1
dissimilatory-type sulfite reductase subunit alpha
COORDINATES: protein motif:HMM:NF024214.2
COORDINATES: similar to AA sequence:RefSeq:WP_011343137.1
COORDINATES: protein motif:HMM:NF011202.0
GO:0050515 - 4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase activity [Evidence IEA]
4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase
COORDINATES: protein motif:HMM:NF014582.2
COORDINATES: protein motif:HMM:NF014616.2
YbaB/EbfC family nucleoid-associated protein
COORDINATES: protein motif:HMM:NF024085.2
COORDINATES: similar to AA sequence:RefSeq:WP_011345477.1
COORDINATES: similar to AA sequence:RefSeq:WP_015051892.1
COORDINATES: similar to AA sequence:RefSeq:WP_015051893.1
GO:0000179 - rRNA (adenine-N6,N6-)-dimethyltransferase activity [Evidence IEA]
16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))- dimethyltransferase RsmA
COORDINATES: protein motif:HMM:NF019142.2
ubiquitin-like domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_011345485.1
GO:0008817 - corrinoid adenosyltransferase activity [Evidence IEA]
cob(I)yrinic acid a,c-diamide adenosyltransferase
COORDINATES: protein motif:HMM:TIGR00010.1
COORDINATES: similar to AA sequence:RefSeq:WP_014043146.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0004825 - methionine-tRNA ligase activity [Evidence IEA]; GO:0000049 - tRNA binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_015051898.1
COORDINATES: similar to AA sequence:RefSeq:WP_003867349.1
GO:0008649 - rRNA methyltransferase activity [Evidence IEA]; GO:0008757 - S-adenosylmethionine-dependent methyltransferase activity [Evidence IEA]
GO:0000451 - rRNA 2'-O-methylation [Evidence IEA]
16S rRNA (cytidine(1402)-2'-O)-methyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_009610867.1
COORDINATES: protein motif:HMM:TIGR00678.1
COORDINATES: protein motif:HMM:TIGR00041.1
GO:0004798 - thymidylate kinase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF013444.2
COORDINATES: similar to AA sequence:RefSeq:WP_015050846.1
COORDINATES: similar to AA sequence:RefSeq:WP_015051437.1
COORDINATES: similar to AA sequence:RefSeq:WP_015051912.1
COORDINATES: similar to AA sequence:RefSeq:WP_015051913.1
pyruvate flavodoxin/ferredoxin oxidoreductase
COORDINATES: similar to AA sequence:RefSeq:WP_015051914.1
COORDINATES: protein motif:HMM:NF019085.2
pro-sigmaK processing inhibitor BofA family protein
COORDINATES: similar to AA sequence:RefSeq:WP_011244903.1
COORDINATES: similar to AA sequence:RefSeq:WP_013296622.1
COORDINATES: protein motif:HMM:NF004046.0
GO:0005524 - ATP binding [Evidence IEA]; GO:0003677 - DNA binding [Evidence IEA]; GO:0003887 - DNA-directed DNA polymerase activity [Evidence IEA]
signal recognition particle sRNA large type
COORDINATES: nucleotide motif:Rfam:14.4:RF01854
COORDINATES: protein motif:HMM:NF008113.2
GO:0008251 - tRNA-specific adenosine deaminase activity [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA]
GO:0002100 - tRNA wobble adenosine to inosine editing [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013780067.1
GO:0004019 - adenylosuccinate synthase activity [Evidence IEA]; GO:0005525 - GTP binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013780066.1
COORDINATES: similar to AA sequence:RefSeq:WP_015049249.1
GO:0003678 - DNA helicase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013403675.1
COORDINATES: similar to AA sequence:RefSeq:WP_011342985.1
COORDINATES: similar to AA sequence:RefSeq:WP_015738713.1
COORDINATES: similar to AA sequence:RefSeq:WP_011342983.1
COORDINATES: similar to AA sequence:RefSeq:WP_003867429.1
COORDINATES: protein motif:HMM:NF014704.2
COORDINATES: protein motif:HMM:NF018564.2
COORDINATES: protein motif:HMM:NF025935.2
COORDINATES: protein motif:HMM:TIGR00180.1
GO:0007059 - chromosome segregation [Evidence IEA]; GO:0000910 - cytokinesis [Evidence IEA]
ParB/RepB/Spo0J family partition protein
COORDINATES: similar to AA sequence:RefSeq:WP_012096464.1
COORDINATES: protein motif:HMM:NF014575.2
GO:0046118 - 7-methylguanosine biosynthetic process [Evidence IEA]; GO:0031167 - rRNA methylation [Evidence IEA]
16S rRNA (guanine(527)-N(7))-methyltransferase RsmG
COORDINATES: protein motif:HMM:NF041568.1
GO:0051510 - regulation of unidimensional cell growth [Evidence IEA]
RNA-binding cell elongation regulator Jag/EloR
COORDINATES: similar to AA sequence:RefSeq:WP_011342952.1
YidC/Oxa1 family membrane protein insertase
COORDINATES: similar to AA sequence:RefSeq:WP_002452125.1
membrane protein insertion efficiency factor YidD
COORDINATES: protein motif:HMM:NF013022.2
GO:0004526 - ribonuclease P activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012547104.1