Anopheles aquasalis mitochondrion, complete genome.
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Nematocera; Culicoidea; Culicidae; Anophelinae; Anopheles.
Submitted (08-JUL-2022) National Center for Biotechnology Information, NIH, Bethesda, MD 20894, USA
Submitted (01-JUN-2022) WELLCOME SANGER INSTITUTE, Tree of Life, Wellcome Genome Campus, Hinxton CB10 1SA, United Kingdom
PROVISIONAL REFSEQ: This record has not yet been subject to final\nNCBI review. The reference sequence is identical to OX030886.\nThe assembly idAnoAquaMG_Q_19 is based on 94x PacBio HiFi data, 10X\nGenomics Chromium data, and Arima Hi-C data generated by the\nAnopheles Reference Genomes project. The assembly process included\nthe following sequence of steps: initial PacBio assembly generation\nwith hifiasm, retained haplotig separation with purge_dups,\nshort-read polishing using FreeBayes-called variants from 10X\nGenomics Chromium reads aligned with LongRanger, and Hi-C based\nscaffolding with SALSA2. The mitochondrial genome was assembled\nusing MitoHifi. Finally, the assembly was analysed and manually\nimproved using gEVAL. Chromosome-scale scaffolds confirmed by the\nHi-C data have been named, ordered and oriented based on published\ndata.\nCOMPLETENESS: full length.
start codon not determined; TAA stop codon is completed by the addition of 3' A residues to the mRNA
TAA stop codon is completed by the addition of 3' A residues to the mRNA