Methylobacterium radiotolerans JCM 2831 plasmid pMRAD04, complete sequence.
type: Entry
definition: Methylobacterium radiotolerans JCM 2831 plasmid pMRAD04, complete sequence.
sequence version: NC_010517.1
sequence date: 2023-04-24
sequence: sequence
division: CON
label: NC_010517.1
type: RefSeq
SIO_000068: refseq
dblink: PRJNA224116
dblink: SAMN00000277
keyword: RefSeq
source: Methylobacterium radiotolerans JCM 2831
organism: Methylobacterium radiotolerans JCM 2831
taxonomy: Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales; Methylobacteriaceae; Methylobacterium.
reference: 1
references: 22887658
reference: 2
reference: 3
comment: REFSEQ INFORMATION: The reference sequence is identical to\nCP001005.1.\nURL -- http://www.jgi.doe.gov\nJGI Project ID: 4003781\nSource DNA and bacteria available from Christopher J. Marx\n(cmarx@oeb.harvard.edu)\nContacts: Christopher J. Marx (cmarx@oeb.harvard.edu)\n Paul Richardson (microbes@cuba.jgi-psf.org)\nQuality assurance done by JGI-Stanford\nAnnotation done by JGI-ORNL and JGI-PGF\nFinishing done by JGI-LANL\nFinished microbial genomes have been curated to close all gaps with\ngreater than 98% coverage of at least two independent clones. Each\nbase pair has a minimum q (quality) value of 30 and the total error\nrate is less than one per 50000.\nThe JGI and collaborators endorse the principles for the\ndistribution and use of large scale sequencing data adopted by the\nlarger genome sequencing community and urge users of this data to\nfollow them. it is our intention to publish the work of this\nproject in a timely fashion and we welcome collaborative\ninteraction on the project and analysis.\n(http://www.genome.gov/page.cfm?pageID=10506376).\nThe annotation was added by the NCBI Prokaryotic Genome Annotation\nPipeline (PGAP). Information about PGAP can be found here:\nhttps://www.ncbi.nlm.nih.gov/genome/annotation_prok/\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI RefSeq\nAnnotation Date :: 04/24/2023 01:53:33\nAnnotation Pipeline :: NCBI Prokaryotic Genome\n Annotation Pipeline (PGAP)\nAnnotation Method :: Best-placed reference protein\n set; GeneMarkS-2+\nAnnotation Software revision :: 6.5\nFeatures Annotated :: Gene; CDS; rRNA; tRNA; ncRNA\nGenes (total) :: 6,610\nCDSs (total) :: 6,527\nGenes (coding) :: 6,431\nCDSs (with protein) :: 6,431\nGenes (RNA) :: 83\nrRNAs :: 6, 6, 6 (5S, 16S, 23S)\ncomplete rRNAs :: 6, 6, 6 (5S, 16S, 23S)\ntRNAs :: 60\nncRNAs :: 5\nPseudo Genes (total) :: 96\nCDSs (without protein) :: 96\nPseudo Genes (ambiguous residues) :: 0 of 96\nPseudo Genes (frameshifted) :: 36 of 96\nPseudo Genes (incomplete) :: 74…

sequence
subclass of: SO_0000155
sequence length: 37743
topology: circular
so has quality: SO_0000988
location: 1..37743
location: region:1-37743:1
RO_0002162: 426355

NC_010517
type: RefSeq
SIO_000068: refseq

PRJNA224116
type: BioProject
SIO_000068: bioproject

SAMN00000277
type: BioSample
SIO_000068: biosample

1
title: Complete genome sequences of six strains of the genus Methylobacterium
author: Marx, C.J.
author: Bringel, F.
author: Chistoserdova, L.
author: Moulin, L.
author: Farhan Ul Haque, M.
author: Fleischman, D.E.
author: Gruffaz, C.
author: Jourand, P.
author: Knief, C.
author: Lee, M.C.
author: Muller, E.E.
author: Nadalig, T.
author: Peyraud, R.
author: Roselli, S.
author: Russ, L.
author: Goodwin, L.A.
author: Ivanova, N.
author: Kyrpides, N.
author: Lajus, A.
author: Land, M.L.
author: Medigue, C.
author: Mikhailova, N.
author: Nolan, M.
author: Woyke, T.
author: Stolyar, S.
author: Vorholt, J.A.
author: Vuilleumier, S.
journal: J Bacteriol
volume: 194
issue: 17
pages: 4746-4748
year: 2012
pubmed: 22887658

22887658
type: PubMed
SIO_000068: pubmed

2
title: Complete sequence of plasmid4 of Methylobacterium radiotolerans JCM 2831
author: Copeland, A.
author: Lucas, S.
author: Lapidus, A.
author: Glavina del Rio, T.
author: Dalin, E.
author: Tice, H.
author: Bruce, D.
author: Goodwin, L.
author: Pitluck, S.
author: Kiss, H.
author: Brettin, T.
author: Detter, J.C.
author: Han, C.
author: Kuske, C.R.
author: Schmutz, J.
author: Larimer, F.
author: Land, M.
author: Hauser, L.
author: Kyrpides, N.
author: Mikhailova, N.
author: Marx, C.J.
author: Richardson, P.
journal: Unpublished

3
title: Direct Submission
author: Copeland, A.
author: Lucas, S.
author: Lapidus, A.
author: Glavina del Rio, T.
author: Dalin, E.
author: Tice, H.
author: Bruce, D.
author: Goodwin, L.
author: Pitluck, S.
author: Kiss, H.
author: Brettin, T.
author: Detter, J.C.
author: Han, C.
author: Kuske, C.R.
author: Schmutz, J.
author: Larimer, F.
author: Land, M.
author: Hauser, L.
author: Kyrpides, N.
author: Mikhailova, N.
author: Marx, C.J.
author: Richardson, P.
journal: Submitted (19-MAR-2008) US DOE Joint Genome Institute, 2800 Mitchell Drive B100, Walnut Creek, CA 94598-1698, USA

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:37743:1
position: 37743
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-37743:1:source
so part of: sequence
organism: Methylobacterium radiotolerans JCM 2831
mol type: genomic DNA
strain: JCM 2831
type material: type strain of Methylobacterium radiotolerans
plasmid: pMRAD04

426355
type: Taxonomy
SIO_000068: taxonomy

MRAD2831_RS67000
type: Gene
subclass of: SO_0000704
RO_0002162: 426355
locus tag: MRAD2831_RS67000
old locus tag: Mrad2831_6396
so part of: sequence
location: complement(185..892)
location: region:185-892:-1
so has part: feature:185-892:-1:exon
subclass of: SO_0000010

position:185:-1
position: 185
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:892:-1
position: 892
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:185-892:-1:exon

MRAD2831_RS67000
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 426355
locus tag: MRAD2831_RS67000
old locus tag: Mrad2831_6396
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MIDTLKTDARTYSSALGLNGSAPNSSKPIASGSSAGTAVGPAAVIELSDRAKALIAQNRMAQEVADRLAQQATAQHGGDASQTGSAHKAQTSSASSKAPNIYSALKPATANQSTAQTKWEAGAPYGDPTMSDADFLKNNLFAEWDLTGSGWSTEDAQAFRNAVQSGTIKIQKASEIDGLNFKSWQTFTPNPNNGAGYDTTGGTTQNPTGDAKKAIESHRAMAMWTADRGDVYLSW
SIO_010081: MRAD2831_RS67000
subclass of: SO_0000673
so part of: MRAD2831_RS67000
location: complement(185..892)
location: region:185-892:-1
so has part: feature:185-892:-1:exon

WP_012340139.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:185-892:-1:exon

MRAD2831_RS63410
type: Gene
subclass of: SO_0000704
RO_0002162: 426355
locus tag: MRAD2831_RS63410
old locus tag: Mrad2831_6397
so part of: sequence
location: 1331..2110
location: region:1331-2110:1
so has part: feature:1331-2110:1:exon
subclass of: SO_0000010

position:1331:1
position: 1331
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2110:1
position: 2110
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1331-2110:1:exon

MRAD2831_RS63410
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 426355
locus tag: MRAD2831_RS63410
old locus tag: Mrad2831_6397
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017184194.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: SDR family oxidoreductase
translation: MQKLKNKTCVVTGAALGIGRAIAARFHDEGAAVIVTDIDEATGSATAAQIGCRFEPLDVREEADWSRLTRVVPVADVVINNAGVTGFEAGLVPHDPEHASLADWREVHRVNLDGTFLGCRYAIGAMKSAGTGSIINISSRSGLVGIPGAAAYASSKAAIRNHSKTVALYCAQQGWRIRCNSIHPAAILTSIWEPMLGDGADRDAKMQALVADTPLKRFGMPEEVAAIAVMLASDEATYVTGTEVNIDGGLLAGSAASPG
SIO_010081: MRAD2831_RS63410
subclass of: SO_0000673
so part of: MRAD2831_RS63410
location: 1331..2110
location: region:1331-2110:1
so has part: feature:1331-2110:1:exon

WP_012340140.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1331-2110:1:exon

MRAD2831_RS63415
type: Gene
subclass of: SO_0000704
RO_0002162: 426355
locus tag: MRAD2831_RS63415
old locus tag: Mrad2831_6398
so part of: sequence
location: 2462..3673
location: region:2462-3673:1
so has part: feature:2462-3673:1:exon
subclass of: SO_0000010

position:2462:1
position: 2462
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3673:1
position: 3673
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2462-3673:1:exon

MRAD2831_RS63415
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 426355
locus tag: MRAD2831_RS63415
old locus tag: Mrad2831_6398
EC number: 2.3.1.-
inference: COORDINATES: protein motif:HMM:NF013884.2
GO function: GO:0016747 - acyltransferase activity, transferring groups other than amino-acyl groups [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: acyltransferase
translation: MSTTPASALDAPRPTIATGRSERLIAFDHMRGFVVGLVVLHHATLAYCTFGHINRVNYALSTAPVVDPGQWIGFDLLVRLNDGFFMPLLFLLSGLFVWDGLKRRGARAFLGARMRRLGLPFAVGVLILSPLAYYPAFLQAGGTSGFGSFWITTVTRGPWPSGPPWFIGILLVFDAAAALVFTLSPRLMAPPSISRLAQYPVGSFVLLLAGSLLLFLPFLIAVGPTRWFAIGPLAIQGSRIGLYAAYFTAGVALGHGGLQAVVPFARAMASRWAAWVLLAAATGTVFIAVASAIAGGDVVLRPTGALAVVGTMQSAFCAAACFALPALFVRFGGGSSPAWESLAANSFAIYLLHYPFVTWTQYGLLPVSVDAALKGALVFVVALAASWASAAFLRPLPLLGRIL
SIO_010081: MRAD2831_RS63415
subclass of: SO_0000673
so part of: MRAD2831_RS63415
location: 2462..3673
location: region:2462-3673:1
so has part: feature:2462-3673:1:exon

WP_012340141.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2462-3673:1:exon

MRAD2831_RS65860
type: Gene
subclass of: SO_0000704
RO_0002162: 426355
locus tag: MRAD2831_RS65860
old locus tag: Mrad2831_6399
so part of: sequence
location: 3677..5134
location: region:3677-5134:1
so has part: feature:3677-5134:1:exon
subclass of: SO_0000010

position:3677:1
position: 3677
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5134:1
position: 5134
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3677-5134:1:exon

MRAD2831_RS65860
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 426355
locus tag: MRAD2831_RS65860
old locus tag: Mrad2831_6399
EC number: 3.4.13.-
inference: COORDINATES: similar to AA sequence:RefSeq:WP_020204664.1
GO function: GO:0070573 - metallodipeptidase activity [Evidence IEA]
GO process: GO:0006508 - proteolysis [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: membrane dipeptidase
translation: MPKLDISPRGRDLHLSWTAIFDGSADRYDGAPVTITGWTVTAAETPAASYCLLTFEPACCRGCLPSDPTTCIEVLAVEPVPVDGREVTLRGVFRRLHGDPCGWRYRLDATTVVHRPTHGSPFALSRRGFVGAASLLCLPVQAVAQASSPTEVTVAQRAAAADFLAARPTIDCHSHAGRILRVRQDEGHAPFTPVAEPMRRGGLATACLAIVSDSPTHRITPEGRIKAFRDPEPGELAAYAERGFTRLHALVREQGLRIVHTAADLDAARSEAPMVLVAAEGADFLEGDLGGLEVAYQRAVLRHLQLTHYRVNALGDIQTEPPVHGGLTAFGAEVIRRCEALGVVVDVAHGTEALVRQAAEVAHKPLVLSHTSLTTKPAPRTRRITPEHARVVAGTGGVIGIWPPVSLFRDLDALAEGIARMADVVGPAHVGIGSDMMGLVGPSALPDYTSLPDLAAILLVRFSPDETAGILGGNYLRVAKACLAA
SIO_010081: MRAD2831_RS65860
subclass of: SO_0000673
so part of: MRAD2831_RS65860
location: 3677..5134
location: region:3677-5134:1
so has part: feature:3677-5134:1:exon

WP_012340142.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3677-5134:1:exon

MRAD2831_RS63425
type: Gene
subclass of: SO_0000704
RO_0002162: 426355
locus tag: MRAD2831_RS63425
old locus tag: Mrad2831_6400
so part of: sequence
location: 5265..6158
location: region:5265-6158:1
so has part: feature:5265-6158:1:exon
subclass of: SO_0000010

position:5265:1
position: 5265
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6158:1
position: 6158
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5265-6158:1:exon

MRAD2831_RS63425
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 426355
locus tag: MRAD2831_RS63425
old locus tag: Mrad2831_6400
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015340708.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: LD-carboxypeptidase
translation: MPLLRSGDLVRFVSPASCVSPQAVERRMDVVRSWGLLVEVSPNAFKKFSYLAGTDDERFSDLSNALLDPSVRAVFATRGGKGSYRILHRLPFGLIGRDPKPVIGFSDITALHLALWRECSAIGVHGALTGDDEDCLSEIAAKALRSALMEDSPLSIQSDRMLPSAALTTSGSSTGPLIGGNLDMIATTAGWALPSLRGAILLIESAGLAIGQLDRALTMLGRAGHLDGLVGIAVGHVKGTPPNPPLDAIDLLRQHLSGFAVPILGGLPIGHDGDARSVLIGARAELDADSGTLVQRP
SIO_010081: MRAD2831_RS63425
subclass of: SO_0000673
so part of: MRAD2831_RS63425
location: 5265..6158
location: region:5265-6158:1
so has part: feature:5265-6158:1:exon

WP_012340143.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:5265-6158:1:exon

MRAD2831_RS67005
type: Gene
subclass of: SO_0000704
RO_0002162: 426355
locus tag: MRAD2831_RS67005
so part of: sequence
location: 6410..6799
location: region:6410-6799:1
so has part: feature:6410-6799:1:exon
subclass of: SO_0000010

position:6410:1
position: 6410
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6799:1
position: 6799
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6410-6799:1:exon

MRAD2831_RS67005
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 426355
locus tag: MRAD2831_RS67005
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MLAGKSVMVVAIWLVSFASLILAGWFWQAARTNMRSALTRFVNEEEARVALGYVAWDPTTTDVARTYLIVSSAFAFIGMISSALGLWLAGASVMAALLMMGSTVGFADVLWKWLSFKRRYVLGGTNRNR
SIO_010081: MRAD2831_RS67005
subclass of: SO_0000673
so part of: MRAD2831_RS67005
location: 6410..6799
location: region:6410-6799:1
so has part: feature:6410-6799:1:exon

WP_147021507.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:6410-6799:1:exon

MRAD2831_RS65865
type: Gene
subclass of: SO_0000704
RO_0002162: 426355
locus tag: MRAD2831_RS65865
old locus tag: Mrad2831_6401
pseudo: true
so part of: sequence
location: 6878..7632
location: region:6878-7632:1
so has part: feature:6878-7632:1:exon
subclass of: SO_0000010

position:6878:1
position: 6878
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7632:1
position: 7632
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6878-7632:1:exon

MRAD2831_RS65865
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 426355
locus tag: MRAD2831_RS65865
old locus tag: Mrad2831_6401
inference: COORDINATES: protein motif:HMM:NF033580.1
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: IS5 family transposase
SIO_010081: MRAD2831_RS65865
subclass of: SO_0000673
so part of: MRAD2831_RS65865
location: 6878..7632
location: region:6878-7632:1
so has part: feature:6878-7632:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6878-7632:1:exon

MRAD2831_RS67010
type: Gene
subclass of: SO_0000704
RO_0002162: 426355
locus tag: MRAD2831_RS67010
so part of: sequence
location: complement(7788..8249)
location: region:7788-8249:-1
so has part: feature:7788-8249:-1:exon
subclass of: SO_0000010

position:7788:-1
position: 7788
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8249:-1
position: 8249
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7788-8249:-1:exon

MRAD2831_RS67010
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 426355
locus tag: MRAD2831_RS67010
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MSAKTYSSEIERALARPDAGQMRQQLLAYAKHHAEGDGDWPEELADDFDEILLCRFEDPEKALAYVIIAASQSDDAKFLALLACGNLEDVLRDPAPELLERIVAEARKSARFRWLLSHPFKVAVADQAWDAIEQFRITGPHEEPPRDQLPPRD
SIO_010081: MRAD2831_RS67010
subclass of: SO_0000673
so part of: MRAD2831_RS67010
location: complement(7788..8249)
location: region:7788-8249:-1
so has part: feature:7788-8249:-1:exon

WP_147021527.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:7788-8249:-1:exon

MRAD2831_RS65870
type: Gene
subclass of: SO_0000704
RO_0002162: 426355
locus tag: MRAD2831_RS65870
old locus tag: Mrad2831_6402
so part of: sequence
location: complement(8454..8984)
location: region:8454-8984:-1
so has part: feature:8454-8984:-1:exon
subclass of: SO_0000010

position:8454:-1
position: 8454
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8984:-1
position: 8984
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8454-8984:-1:exon

MRAD2831_RS65870
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 426355
locus tag: MRAD2831_RS65870
old locus tag: Mrad2831_6402
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006615038.1
GO function: GO:0008080 - N-acetyltransferase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: GNAT family N-acetyltransferase
translation: MISATFQSADRADAAAIASLHAKSWRDAYRSILDPTFLAGPIEVDRLALWSDRLADPAPSLIVETARDSAHQLIGFIAAFRDHDPLWGSLVDNLHVAPQMRGLKIGERLLHSMAQNIALKGTDNGLYLWVFEANQAGLRFYQRLGGKVVEHDTSRIPAASGKSILRVHWPTLSALT
SIO_010081: MRAD2831_RS65870
subclass of: SO_0000673
so part of: MRAD2831_RS65870
location: complement(8454..8984)
location: region:8454-8984:-1
so has part: feature:8454-8984:-1:exon

WP_012340145.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:8454-8984:-1:exon

MRAD2831_RS63435
type: Gene
subclass of: SO_0000704
RO_0002162: 426355
locus tag: MRAD2831_RS63435
old locus tag: Mrad2831_6403
so part of: sequence
location: 9274..9855
location: region:9274-9855:1
so has part: feature:9274-9855:1:exon
subclass of: SO_0000010

position:9274:1
position: 9274
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9855:1
position: 9855
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9274-9855:1:exon

MRAD2831_RS63435
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 426355
locus tag: MRAD2831_RS63435
old locus tag: Mrad2831_6403
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012457148.1
GO function: GO:0003677 - DNA binding [Evidence IEA]; GO:0000150 - DNA strand exchange activity [Evidence IEA]
GO process: GO:0006310 - DNA recombination [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: recombinase family protein
translation: MLVGYARVSTQDQNLDLQRDALTKAGCERLFEEKKSGKAGTKRPAFDEALAFLRPEDVLVVWKLDRLGRSLVEMMRTIDGLRVKEIHFRSLTEQFDSATAHGRFALQMHGAMAEYFLDLNRERTMEGLKAALARGRRGGRPKKLKEADLEAARAMLAAGTISVAEIARRLGVNRDTFYNYFPRARANSVAAKG
SIO_010081: MRAD2831_RS63435
subclass of: SO_0000673
so part of: MRAD2831_RS63435
location: 9274..9855
location: region:9274-9855:1
so has part: feature:9274-9855:1:exon

WP_012338183.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:9274-9855:1:exon

MRAD2831_RS68105
type: Gene
subclass of: SO_0000704
RO_0002162: 426355
locus tag: MRAD2831_RS68105
old locus tag: Mrad2831_6404
so part of: sequence
location: 10143..10421
location: region:10143-10421:1
so has part: feature:10143-10421:1:exon
subclass of: SO_0000010

position:10143:1
position: 10143
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:10421:1
position: 10421
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:10143-10421:1:exon

MRAD2831_RS68105
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 426355
locus tag: MRAD2831_RS68105
old locus tag: Mrad2831_6404
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: METAGLTCLLATLSDLSLDEPLMQEILRAGPHTVNVFHRGDGRRIVGAVLYGKPGAALPVLPIPRVKRPGPVPRSRARDVPGQLDLFAQAGT
SIO_010081: MRAD2831_RS68105
subclass of: SO_0000673
so part of: MRAD2831_RS68105
location: 10143..10421
location: region:10143-10421:1
so has part: feature:10143-10421:1:exon

WP_012338184.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:10143-10421:1:exon

MRAD2831_RS65880
type: Gene
subclass of: SO_0000704
RO_0002162: 426355
locus tag: MRAD2831_RS65880
old locus tag: Mrad2831_6405
so part of: sequence
location: complement(10437..10763)
location: region:10437-10763:-1
so has part: feature:10437-10763:-1:exon
subclass of: SO_0000010

position:10437:-1
position: 10437
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:10763:-1
position: 10763
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:10437-10763:-1:exon

MRAD2831_RS65880
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 426355
locus tag: MRAD2831_RS65880
old locus tag: Mrad2831_6405
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011500626.1
GO function: GO:0003677 - DNA binding [Evidence IEA]
GO process: GO:0030261 - chromosome condensation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: HU family DNA-binding protein
translation: MIRSELVARIAAKNPHLYARDVEAIVATILKTMTTALVRGDRIELREFGTFTVRHHRARIARNPRSQAVVTVPAKGRVAFKPSKAMRELLQAKPLSTEHSPAPSPQTP
SIO_010081: MRAD2831_RS65880
subclass of: SO_0000673
so part of: MRAD2831_RS65880
location: complement(10437..10763)
location: region:10437-10763:-1
so has part: feature:10437-10763:-1:exon

WP_012338185.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:10437-10763:-1:exon

MRAD2831_RS67015
type: Gene
subclass of: SO_0000704
RO_0002162: 426355
locus tag: MRAD2831_RS67015
old locus tag: Mrad2831_6406
so part of: sequence
location: complement(10837..11007)
location: region:10837-11007:-1
so has part: feature:10837-11007:-1:exon
subclass of: SO_0000010

position:10837:-1
position: 10837
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:11007:-1
position: 11007
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:10837-11007:-1:exon

MRAD2831_RS67015
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 426355
locus tag: MRAD2831_RS67015
old locus tag: Mrad2831_6406
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MSTTDVAGGGSDPVELAASLAIDLRAAIDRIADPDLRELIDQILLNLGAKLAQRLS
SIO_010081: MRAD2831_RS67015
subclass of: SO_0000673
so part of: MRAD2831_RS67015
location: complement(10837..11007)
location: region:10837-11007:-1
so has part: feature:10837-11007:-1:exon

WP_012338186.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:10837-11007:-1:exon

MRAD2831_RS63445
type: Gene
subclass of: SO_0000704
RO_0002162: 426355
locus tag: MRAD2831_RS63445
old locus tag: Mrad2831_6407
so part of: sequence
location: complement(11044..11697)
location: region:11044-11697:-1
so has part: feature:11044-11697:-1:exon
subclass of: SO_0000010

position:11044:-1
position: 11044
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:11697:-1
position: 11697
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11044-11697:-1:exon

MRAD2831_RS63445
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 426355
locus tag: MRAD2831_RS63445
old locus tag: Mrad2831_6407
inference: COORDINATES: protein motif:HMM:NF024836.2
GO function: GO:0016740 - transferase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: acyl-homoserine-lactone synthase
translation: MFRLVTGDIDRDLPDLAERIYKFRHSFFVDHLGWEACRKPDGRERDQFDSPHSIHIVGEEHGEIISYARLLPTTRPHLVTDVYPEIMQGARSPAGPRIYEWTRHAVSPKKREAKGPSALTRAAFAAVARAVEVLDLDGLLVQTHPVLVDRVMDMGWDVEPLALPTTYDGALLLPIYARLVPQTLTIAQAAFSAHGSDLKTPVLRASSATTDRPTLAL
SIO_010081: MRAD2831_RS63445
subclass of: SO_0000673
so part of: MRAD2831_RS63445
location: complement(11044..11697)
location: region:11044-11697:-1
so has part: feature:11044-11697:-1:exon

WP_012338187.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:11044-11697:-1:exon

MRAD2831_RS63450
type: Gene
subclass of: SO_0000704
RO_0002162: 426355
locus tag: MRAD2831_RS63450
old locus tag: Mrad2831_6408
so part of: sequence
location: complement(11789..12535)
location: region:11789-12535:-1
so has part: feature:11789-12535:-1:exon
subclass of: SO_0000010

position:11789:-1
position: 11789
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:12535:-1
position: 12535
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11789-12535:-1:exon

MRAD2831_RS63450
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 426355
locus tag: MRAD2831_RS63450
old locus tag: Mrad2831_6408
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015927709.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: LuxR family transcriptional regulator
translation: MAGALSIRQTAFDIVHRLRRASTDVDVYSELRRSGAIFGYDVFLIAGLPRAPHENLYDCSLISGWPPEWGRRYQERRHMHVDPVIRHIRGTTDPFLWQEAVDAQVTPEGMVVMEEARAFSLNEGFCVPFHQIDGTEAGVSFGGEQVRLSQDERAALHLVAIYAMSTAKAIARRRGLSEDDGTPPSPLTGREAECLKWSSTGKSAWEIGVILSISTRTVEHHLGSAVRKLNSVTRTQAVAEALRRHIID
SIO_010081: MRAD2831_RS63450
subclass of: SO_0000673
so part of: MRAD2831_RS63450
location: complement(11789..12535)
location: region:11789-12535:-1
so has part: feature:11789-12535:-1:exon

WP_012338188.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:11789-12535:-1:exon

MRAD2831_RS63455
type: Gene
subclass of: SO_0000704
RO_0002162: 426355
locus tag: MRAD2831_RS63455
so part of: sequence
location: 12657..12917
location: region:12657-12917:1
so has part: feature:12657-12917:1:exon
subclass of: SO_0000010

position:12657:1
position: 12657
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:12917:1
position: 12917
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:12657-12917:1:exon

MRAD2831_RS63455
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 426355
locus tag: MRAD2831_RS63455
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MTDQTRTLSLLQQISDLMDVDPAAFKQPRSQPAVSKAGGSVAEGGEVPTLQWLVRAYCALPTDEARIAAIRMIEALAAPEPKLAPA
SIO_010081: MRAD2831_RS63455
subclass of: SO_0000673
so part of: MRAD2831_RS63455
location: 12657..12917
location: region:12657-12917:1
so has part: feature:12657-12917:1:exon

WP_041373153.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:12657-12917:1:exon

MRAD2831_RS63460
type: Gene
subclass of: SO_0000704
RO_0002162: 426355
locus tag: MRAD2831_RS63460
old locus tag: Mrad2831_6409
so part of: sequence
location: 13041..13469
location: region:13041-13469:1
so has part: feature:13041-13469:1:exon
subclass of: SO_0000010

position:13041:1
position: 13041
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:13469:1
position: 13469
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:13041-13469:1:exon

MRAD2831_RS63460
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 426355
locus tag: MRAD2831_RS63460
old locus tag: Mrad2831_6409
inference: COORDINATES: similar to AA sequence:RefSeq:WP_007568457.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MPIRPEHRFFYPIDWPQLSAVIRFERAAGRCETCQRPHGQTVFHLGDGRWWDGEGGTWRDGRGRRVRLALGVDDVLGHVRRTRVVLAAAHRDHDTSNNTNANLAAFCQRCHMIHDRPEHRRRRWITLFRRKALGDLFRGPYV
SIO_010081: MRAD2831_RS63460
subclass of: SO_0000673
so part of: MRAD2831_RS63460
location: 13041..13469
location: region:13041-13469:1
so has part: feature:13041-13469:1:exon

WP_012338189.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:13041-13469:1:exon

MRAD2831_RS63465
type: Gene
subclass of: SO_0000704
RO_0002162: 426355
locus tag: MRAD2831_RS63465
old locus tag: Mrad2831_6410
so part of: sequence
location: complement(13490..14008)
location: region:13490-14008:-1
so has part: feature:13490-14008:-1:exon
subclass of: SO_0000010

position:13490:-1
position: 13490
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:14008:-1
position: 14008
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:13490-14008:-1:exon

MRAD2831_RS63465
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 426355
locus tag: MRAD2831_RS63465
old locus tag: Mrad2831_6410
inference: COORDINATES: similar to AA sequence:RefSeq:WP_007564105.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: MucR family transcriptional regulator
translation: MDDNTGTIEAEAIDYTEVTADLVAAYVSNNPLPAAELATLIASVHAAVTGLGTPGVPAVPRPEKPTAAQIRKSIRPDALISFEDGKPYKTLRRHLTGLGLDAATYREKWGLPRDYPMVAASYSEARSAMAKSIGLGQMRGKAKRQPTETAASTAEKPKRPGRPRKAKEPVEA
SIO_010081: MRAD2831_RS63465
subclass of: SO_0000673
so part of: MRAD2831_RS63465
location: complement(13490..14008)
location: region:13490-14008:-1
so has part: feature:13490-14008:-1:exon

WP_012338190.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:13490-14008:-1:exon

MRAD2831_RS63470
type: Gene
subclass of: SO_0000704
RO_0002162: 426355
locus tag: MRAD2831_RS63470
old locus tag: Mrad2831_6412
so part of: sequence
location: complement(14840..15244)
location: region:14840-15244:-1
so has part: feature:14840-15244:-1:exon
subclass of: SO_0000010

position:14840:-1
position: 14840
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:15244:-1
position: 15244
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:14840-15244:-1:exon

MRAD2831_RS63470
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 426355
locus tag: MRAD2831_RS63470
old locus tag: Mrad2831_6412
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012340178.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: MucR family transcriptional regulator
translation: MTAHLVSAYVRRNNVPVSDLATLIASAADALIGLTNSDTPAAPAASKTTPAQIRASITHEALISFEDGKRYQTLKRHLTVHGLTPETYRAKWGLPRDYPMVAPGYSERRSAIATSLQFRPSRGATARKAGAAKA
SIO_010081: MRAD2831_RS63470
subclass of: SO_0000673
so part of: MRAD2831_RS63470
location: complement(14840..15244)
location: region:14840-15244:-1
so has part: feature:14840-15244:-1:exon

WP_106427988.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:14840-15244:-1:exon

MRAD2831_RS63475
type: Gene
subclass of: SO_0000704
RO_0002162: 426355
locus tag: MRAD2831_RS63475
old locus tag: Mrad2831_6413
so part of: sequence
location: complement(15523..15762)
location: region:15523-15762:-1
so has part: feature:15523-15762:-1:exon
subclass of: SO_0000010

position:15523:-1
position: 15523
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:15762:-1
position: 15762
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:15523-15762:-1:exon

MRAD2831_RS63475
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 426355
locus tag: MRAD2831_RS63475
old locus tag: Mrad2831_6413
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012338193.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MPYTLQRLAAGSYDLLLDGDVVGSVVRSLTKGGDVRGWYAELLEAAPPLPAPFTQEAHRFDTLDDTLAWLGGAQIEGGV
SIO_010081: MRAD2831_RS63475
subclass of: SO_0000673
so part of: MRAD2831_RS63475
location: complement(15523..15762)
location: region:15523-15762:-1
so has part: feature:15523-15762:-1:exon

WP_012338193.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:15523-15762:-1:exon

MRAD2831_RS63480
type: Gene
subclass of: SO_0000704
RO_0002162: 426355
locus tag: MRAD2831_RS63480
old locus tag: Mrad2831_R0081
so part of: sequence
location: complement(15780..15855)
location: region:15780-15855:-1
so has part: feature:15780-15855:-1:exon
subclass of: SO_0000663

position:15780:-1
position: 15780
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:15855:-1
position: 15855
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:15780-15855:-1:exon

MRAD2831_RS63480
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 426355
locus tag: MRAD2831_RS63480
old locus tag: Mrad2831_R0081
product: tRNA-Ile
inference: COORDINATES: profile:tRNAscan-SE:2.0.12
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:complement(15820..15822),aa:Ile,seq:cat)
SIO_010081: MRAD2831_RS63480
subclass of: SO_0000673
so part of: MRAD2831_RS63480
location: complement(15780..15855)
location: region:15780-15855:-1
so has part: feature:15780-15855:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:15780-15855:-1:exon

MRAD2831_RS63485
type: Gene
subclass of: SO_0000704
RO_0002162: 426355
locus tag: MRAD2831_RS63485
old locus tag: Mrad2831_6414
so part of: sequence
location: complement(15924..16196)
location: region:15924-16196:-1
so has part: feature:15924-16196:-1:exon
subclass of: SO_0000010

position:15924:-1
position: 15924
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:16196:-1
position: 16196
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:15924-16196:-1:exon

MRAD2831_RS63485
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 426355
locus tag: MRAD2831_RS63485
old locus tag: Mrad2831_6414
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012340147.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MSVPPSEDEDFEHSSLSGPVSHDGETIDLEIYRRADSQDPWRMEIVHIGGGCTRWSVEFATDQEAVRAFRSLVAEHGLAIFTSLGSDPQH
SIO_010081: MRAD2831_RS63485
subclass of: SO_0000673
so part of: MRAD2831_RS63485
location: complement(15924..16196)
location: region:15924-16196:-1
so has part: feature:15924-16196:-1:exon

WP_012340147.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:15924-16196:-1:exon

MRAD2831_RS63490
type: Gene
subclass of: SO_0000704
RO_0002162: 426355
locus tag: MRAD2831_RS63490
old locus tag: Mrad2831_6415
so part of: sequence
location: 16540..17757
location: region:16540-17757:1
so has part: feature:16540-17757:1:exon
subclass of: SO_0000010

position:16540:1
position: 16540
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:17757:1
position: 17757
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:16540-17757:1:exon

MRAD2831_RS63490
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 426355
locus tag: MRAD2831_RS63490
old locus tag: Mrad2831_6415
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012319468.1
GO function: GO:0005198 - structural molecule activity [Evidence IEA]
GO process: GO:0071973 - bacterial-type flagellum-dependent cell motility [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: flagellin
translation: MSSITLSAATRQNLLSLQDTAQLMSTTQNRLATGKTVNSALDNPTNFFTSQALDGRSASLNSLLDGVSNGIQSIQAANQGITSIQKLVSQAKSIASQALSTQLTTTGTAANAYSASTASQTVLLTINGTSVSATVAASSSISSTVAALNSAVASASTSSSGSFGAGAIFSVDSTGTKIVLNAQADVEFQNSGSQTALGFTASGTTASTYGTAASTVVSSDLSISGVTQRASLASQYNNLLNQITQLASDASYNGVNLIAGKGNDMNIKFNDTGSSNLNVASVDATSNGLGLSSITNSNSTSSQNGLGNFLLNSDVNKTLATLTNAGNSLNSAASALGSNLSVVQNRQDFSKQLINVLQTGSANLTNADLNQEAANSQALSTRQSMGISALSLANSAQQGVLQLLR
SIO_010081: MRAD2831_RS63490
subclass of: SO_0000673
so part of: MRAD2831_RS63490
location: 16540..17757
location: region:16540-17757:1
so has part: feature:16540-17757:1:exon

WP_012340148.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:16540-17757:1:exon

MRAD2831_RS63500
type: Gene
subclass of: SO_0000704
RO_0002162: 426355
locus tag: MRAD2831_RS63500
old locus tag: Mrad2831_6417
so part of: sequence
location: complement(19319..19909)
location: region:19319-19909:-1
so has part: feature:19319-19909:-1:exon
subclass of: SO_0000010

position:19319:-1
position: 19319
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:19909:-1
position: 19909
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:19319-19909:-1:exon

MRAD2831_RS63500
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 426355
locus tag: MRAD2831_RS63500
old locus tag: Mrad2831_6417
inference: COORDINATES: similar to AA sequence:RefSeq:WP_018185176.1
GO function: GO:0003677 - DNA binding [Evidence IEA]; GO:0000150 - DNA strand exchange activity [Evidence IEA]
GO process: GO:0006310 - DNA recombination [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: recombinase family protein
translation: MARFGYARVSSTDQDLAIQLTKLKAAGCQVIRSEKMSGKSADDRPELATVMQFLRDGDELVVVRLDRLGRSTRDVLNLVHELDQKGAALRILDPELTTGGDVGRIVVTVLGMVAEMERKFILERQRAGIEAAKAAGVYAGKGRPRSMPEEEIRRRHAAGEGPTAIARALQISRRSVYRALKGAVSPGTVAPSPKQV
SIO_010081: MRAD2831_RS63500
subclass of: SO_0000673
so part of: MRAD2831_RS63500
location: complement(19319..19909)
location: region:19319-19909:-1
so has part: feature:19319-19909:-1:exon

WP_012340150.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:19319-19909:-1:exon

MRAD2831_RS63505
type: Gene
subclass of: SO_0000704
RO_0002162: 426355
locus tag: MRAD2831_RS63505
old locus tag: Mrad2831_6419
so part of: sequence
location: complement(20565..21230)
location: region:20565-21230:-1
so has part: feature:20565-21230:-1:exon
subclass of: SO_0000010

position:20565:-1
position: 20565
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:21230:-1
position: 21230
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:20565-21230:-1:exon

MRAD2831_RS63505
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 426355
locus tag: MRAD2831_RS63505
old locus tag: Mrad2831_6419
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012752698.1
GO function: GO:0005524 - ATP binding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ParA family protein
translation: MKVVALLAWKGGVGKSTLTINLAAAAIEDGHKVGIIDLDPQSSLSEWSDRRDAEQPFVSDAKPRAVAQIVDAGRGLGLDLMLIDTPPNATDEVDAALDVADAVAIPTGVALFDLKAVTRTVRAATQANKPTSVILNRVGNRSDREAARIRRELNQIGMPILKDVIHDLKVFPRSADAGQTAIEVEPEGKGAVDVRAVWKHISKQVGLRAKTRARKVESVSV
SIO_010081: MRAD2831_RS63505
subclass of: SO_0000673
so part of: MRAD2831_RS63505
location: complement(20565..21230)
location: region:20565-21230:-1
so has part: feature:20565-21230:-1:exon

WP_012340152.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:20565-21230:-1:exon

MRAD2831_RS63510
type: Gene
subclass of: SO_0000704
RO_0002162: 426355
locus tag: MRAD2831_RS63510
old locus tag: Mrad2831_6420
so part of: sequence
location: 21481..21768
location: region:21481-21768:1
so has part: feature:21481-21768:1:exon
subclass of: SO_0000010

position:21481:1
position: 21481
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:21768:1
position: 21768
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:21481-21768:1:exon

MRAD2831_RS63510
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 426355
locus tag: MRAD2831_RS63510
old locus tag: Mrad2831_6420
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012340153.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: type II toxin-antitoxin system RelE/ParE family toxin
translation: MIQSFADKDTEALHLHDTCHRQWRAFKSVAVRKLDMIDAAVALGDLRSPPGNQLEKLSGDRDGQWSIRINDQWRICFRWGDIGPENVEIVDYHRG
SIO_010081: MRAD2831_RS63510
subclass of: SO_0000673
so part of: MRAD2831_RS63510
location: 21481..21768
location: region:21481-21768:1
so has part: feature:21481-21768:1:exon

WP_012340153.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:21481-21768:1:exon

MRAD2831_RS63515
type: Gene
subclass of: SO_0000704
RO_0002162: 426355
locus tag: MRAD2831_RS63515
old locus tag: Mrad2831_6421
so part of: sequence
location: 21773..22057
location: region:21773-22057:1
so has part: feature:21773-22057:1:exon
subclass of: SO_0000010

position:21773:1
position: 21773
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:22057:1
position: 22057
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:21773-22057:1:exon

MRAD2831_RS63515
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 426355
locus tag: MRAD2831_RS63515
old locus tag: Mrad2831_6421
inference: COORDINATES: similar to AA sequence:RefSeq:WP_007560949.1
GO function: GO:0003677 - DNA binding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: HigA family addiction module antitoxin
translation: MPRLRTHPGEVLREEFMAPLGLSANRLAAEIDVPANRLSEIIRERRGVTADTALRLSIRFGTTPQFWLNLQTAHDLSHAEAETDLSKVRHYEPV
SIO_010081: MRAD2831_RS63515
subclass of: SO_0000673
so part of: MRAD2831_RS63515
location: 21773..22057
location: region:21773-22057:1
so has part: feature:21773-22057:1:exon

WP_041373180.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:21773-22057:1:exon

MRAD2831_RS63520
type: Gene
subclass of: SO_0000704
RO_0002162: 426355
locus tag: MRAD2831_RS63520
old locus tag: Mrad2831_6422
so part of: sequence
location: 22435..23250
location: region:22435-23250:1
so has part: feature:22435-23250:1:exon
subclass of: SO_0000010

position:22435:1
position: 22435
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:23250:1
position: 23250
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:22435-23250:1:exon

MRAD2831_RS63520
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 426355
locus tag: MRAD2831_RS63520
old locus tag: Mrad2831_6422
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012338173.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MFADEIRRAIEAASRIALPQVTAQLWRAFGDGHITEAEAERLSVLIETRTLTGKAARVGSPASPEEPQSAEAADTPQVLPGRARRSVGSRPRTDASMERRRRWAASGRLPPGLAARFTLAEQAVLALVAAETTRRGDCRLAVGHLAAIVGVAETTVRNAIREAGKLGLLTVEERRITGFRNDTNIVRIVAPEWTAWLRLARKTHPAHLPQQAAVAEGGGCKSPKRTHTQVLIPLDSRITQPSKSCRRAADDLDRATPSRIQQGGGKARAMR
SIO_010081: MRAD2831_RS63520
subclass of: SO_0000673
so part of: MRAD2831_RS63520
location: 22435..23250
location: region:22435-23250:1
so has part: feature:22435-23250:1:exon

WP_012340155.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:22435-23250:1:exon

MRAD2831_RS63525
type: Gene
subclass of: SO_0000704
RO_0002162: 426355
locus tag: MRAD2831_RS63525
old locus tag: Mrad2831_6423
so part of: sequence
location: complement(23657..24148)
location: region:23657-24148:-1
so has part: feature:23657-24148:-1:exon
subclass of: SO_0000010

position:23657:-1
position: 23657
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:24148:-1
position: 24148
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:23657-24148:-1:exon

MRAD2831_RS63525
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 426355
locus tag: MRAD2831_RS63525
old locus tag: Mrad2831_6423
inference: COORDINATES: protein motif:HMM:NF016255.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ProQ/FINO family protein
translation: MIDAPITTPAPAIEPKAATVVAGRYEVSRAAELCALLRERPLVFPSAPGDAVRPLVLGILQALTPLARPETTPQQLRQAVRVYCLGLSYLLAQGRPVAWRYDLSGHPVEPVSAEHRGSARTRFKTVRAYRDRILAERRAAQLQPDRPAAAGKDVPADVDRQPA
SIO_010081: MRAD2831_RS63525
subclass of: SO_0000673
so part of: MRAD2831_RS63525
location: complement(23657..24148)
location: region:23657-24148:-1
so has part: feature:23657-24148:-1:exon

WP_012340156.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:23657-24148:-1:exon

MRAD2831_RS63530
type: Gene
subclass of: SO_0000704
RO_0002162: 426355
locus tag: MRAD2831_RS63530
old locus tag: Mrad2831_6424
so part of: sequence
location: 24593..25036
location: region:24593-25036:1
so has part: feature:24593-25036:1:exon
subclass of: SO_0000010

position:24593:1
position: 24593
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:25036:1
position: 25036
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:24593-25036:1:exon

MRAD2831_RS63530
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 426355
locus tag: MRAD2831_RS63530
old locus tag: Mrad2831_6424
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012340178.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: MucR family transcriptional regulator
translation: MNGSYAGSSHVDCNTLTTRVIAAFVSHNHVAASDVPSLIALTHAAIASLQTAGSSTAPGTVKATPAQIRASITYEALISFEDGKRYKTLKRHLTACGLTPETYRAKWGLPNDYPLVAPGYAEKRSRIAKSLVMPRYQRDPAPEAEAA
SIO_010081: MRAD2831_RS63530
subclass of: SO_0000673
so part of: MRAD2831_RS63530
location: 24593..25036
location: region:24593-25036:1
so has part: feature:24593-25036:1:exon

WP_012340157.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:24593-25036:1:exon

MRAD2831_RS63535
type: Gene
subclass of: SO_0000704
RO_0002162: 426355
locus tag: MRAD2831_RS63535
old locus tag: Mrad2831_6425
so part of: sequence
location: complement(25128..26396)
location: region:25128-26396:-1
so has part: feature:25128-26396:-1:exon
subclass of: SO_0000010

position:25128:-1
position: 25128
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:26396:-1
position: 26396
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:25128-26396:-1:exon

MRAD2831_RS63535
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 426355
locus tag: MRAD2831_RS63535
old locus tag: Mrad2831_6425
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012319572.1
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: IS256 family transposase
translation: METPTNVVRLRHPEDLDDPLTEVLRSGARRLLAQAVEMEADAFLSAIQDLRLPDGRARLVRHGHGPEREIQTGIGPVPVARVRVRDRGASGSEDRVRFTSTILPKWARRTRSLDALLPVLYLRGISTGDFQEALAALLGRDAPNLSPAVIARLTATWADEYVRWQGRDLSARRYAYIWADGVYLQARMAEQADCMLVLIGATPEGKKELVGFQVGVRESAQSWRELLVDVKQRGLSIAPEIAVGDGALGFWRALDEVFPGTAHQRCWVHKAANVLDKVPKSVQAAMKADLREIHGAPTRAAAEAALTVFVEKYGAKYPRAAACLTKDRDRLLAFYDFPAEHWDHLRSSNPIESVFATVRHRTVRTKGALSATTANLMVFKLVMAASKTWRRPKGENQLPKVVAGVIFRDGTEVTASPDHRAA
SIO_010081: MRAD2831_RS63535
subclass of: SO_0000673
so part of: MRAD2831_RS63535
location: complement(25128..26396)
location: region:25128-26396:-1
so has part: feature:25128-26396:-1:exon

WP_012340158.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:25128-26396:-1:exon

MRAD2831_RS63540
type: Gene
subclass of: SO_0000704
RO_0002162: 426355
locus tag: MRAD2831_RS63540
old locus tag: Mrad2831_6426
so part of: sequence
location: complement(27761..28989)
location: region:27761-28989:-1
so has part: feature:27761-28989:-1:exon
subclass of: SO_0000010

position:27761:-1
position: 27761
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:28989:-1
position: 28989
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:27761-28989:-1:exon

MRAD2831_RS63540
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 426355
locus tag: MRAD2831_RS63540
old locus tag: Mrad2831_6426
inference: COORDINATES: similar to AA sequence:RefSeq:WP_076612078.1
ribosomal slippage: true
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: programmed frameshift; Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: IS3 family transposase
translation: MTKRSTPFSPEVRERAVRMVFDHQGEHGSQYGAIRSIAAKIGCSGETLRNWVRQAERDQGQRPGPTTDERERIKALERENRELRQANEILRKASAYFCDGGARPPVADMIAFIDDHREAYGVEPICRVLPIAPSTYHAHAARRVDPGKLPARARSDAALMVEIRRVFEENFHVYGVRKVWRQLGREGIAVARCTVARLMRVMGLKGVVRGKKVRTTIPDPAAACPLDRVNRQFKAPRPNALWVSDFTYVATWAGFIYVAFVIDAYARRIVGWRVSRTAHVAFVLDALEQALHERRPLWGGGLVHHSDRGSQYLALRYTERLAEAGVEPSVGSVGDSYDNALAETINGLFKAEVIHRRGPWRSFEAVEFATLEWVDWFNTRRLLEPIGNVPPAEAEARYFARAEVRALAA
SIO_010081: MRAD2831_RS63540
subclass of: SO_0000673
so part of: MRAD2831_RS63540
location: complement(join(27761..28701,28701..28989))
location: region:27761-28989:-1
so has part: feature:28701-28989:-1:exon
so has part: feature:27761-28701:-1:exon

WP_085985377.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:28701-28989:-1:exon

position:28701:-1
position: 28701
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:27761-28701:-1:exon

MRAD2831_RS63540
type: Miscellaneous Feature
subclass of: SO_0000001
RO_0002162: 426355
locus tag: MRAD2831_RS63540
old locus tag: Mrad2831_6426
inference: COORDINATES: nucleotide motif:Rfam:14.4:RF01497
inference: COORDINATES: profile:INFERNAL:1.1.4
note: AL1L pseudoknot; Derived by automated computational analysis using gene prediction method: cmsearch.
SIO_010081: MRAD2831_RS63540
subclass of: SO_0000673
so part of: MRAD2831_RS63540
location: complement(28592..28708)
location: region:28592-28708:-1
so has part: feature:28592-28708:-1:exon

position:28592:-1
position: 28592
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:28708:-1
position: 28708
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:28592-28708:-1:exon

MRAD2831_RS63550
type: Gene
subclass of: SO_0000704
RO_0002162: 426355
locus tag: MRAD2831_RS63550
old locus tag: Mrad2831_6428
so part of: sequence
location: 29598..30329
location: region:29598-30329:1
so has part: feature:29598-30329:1:exon
subclass of: SO_0000010

position:29598:1
position: 29598
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:30329:1
position: 30329
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:29598-30329:1:exon

MRAD2831_RS63550
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 426355
locus tag: MRAD2831_RS63550
old locus tag: Mrad2831_6428
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012329809.1
GO function: GO:0043565 - sequence-specific DNA binding [Evidence IEA]
GO process: GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: AraC family transcriptional regulator
translation: MRHHHAYHQVVLPYVGQLDIETNGQAGFVAGSVGSFVAAGSDHSFHGRSDSACIVLDIPHISAEDAANTEDMPTFFAIGPDIQGLIDYMKYSRSDDFTLRLRTAWSELLLARLAEQRIVLPGRERLAVSRAVAFMRERLAQSIGVRDIARAAGTSSSRLHEAFVRQLGTTPHAYLVALRLDAAERMLADPSLSIAEVAIRSGHFDQSALGRALRRERDTTPAMLRRVLRGGTGGNAQTPKERS
SIO_010081: MRAD2831_RS63550
subclass of: SO_0000673
so part of: MRAD2831_RS63550
location: 29598..30329
location: region:29598-30329:1
so has part: feature:29598-30329:1:exon

WP_012340161.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:29598-30329:1:exon

MRAD2831_RS63555
type: Gene
subclass of: SO_0000704
RO_0002162: 426355
locus tag: MRAD2831_RS63555
old locus tag: Mrad2831_6429
so part of: sequence
location: 30383..31306
location: region:30383-31306:1
so has part: feature:30383-31306:1:exon
subclass of: SO_0000010

position:30383:1
position: 30383
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:31306:1
position: 31306
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:30383-31306:1:exon

MRAD2831_RS63555
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 426355
locus tag: MRAD2831_RS63555
old locus tag: Mrad2831_6429
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017360946.1
GO component: GO:0016020 - membrane [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: EamA family transporter
translation: MTVGTRHRATAIGLVAIGLWAGLALSTVAARGVPPFELLALSFGVAFASGLAVLAAQGRDALARLRQPIVPWATAFVAIFLYHALYFFALATVPPARASLIAYLWPLLIVVFAAWVPGGERLRLHHLGGAALGFLGVAILFAGRQDNAATATNQIGYLAALGCAVIWAGYSVVNRRFADVASEMLIGVCGVVALAGAAVHFMAETSVAPSGSQWLAILFLGIGPTGLAFLAWDHATKHGDISLLAPMSYLAPLVSTLLLVLTNQAPATVAVGLSTILVVLGAVLASRGGGPGTSAGRAGTAASGDTG
SIO_010081: MRAD2831_RS63555
subclass of: SO_0000673
so part of: MRAD2831_RS63555
location: 30383..31306
location: region:30383-31306:1
so has part: feature:30383-31306:1:exon

WP_012329808.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:30383-31306:1:exon

MRAD2831_RS63560
type: Gene
subclass of: SO_0000704
RO_0002162: 426355
locus tag: MRAD2831_RS63560
old locus tag: Mrad2831_6430
so part of: sequence
location: complement(31406..31852)
location: region:31406-31852:-1
so has part: feature:31406-31852:-1:exon
subclass of: SO_0000010

position:31406:-1
position: 31406
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:31852:-1
position: 31852
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:31406-31852:-1:exon

MRAD2831_RS63560
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 426355
locus tag: MRAD2831_RS63560
old locus tag: Mrad2831_6430
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014764711.1
GO function: GO:0008080 - N-acetyltransferase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: GNAT family N-acetyltransferase
translation: MSARVREAEASDATAILGLVQAHAAFEREVAPLSLHELHTILSADSPPTRLLVADGDTAPVGYAAVTFDFSLWRGRPYGHLDCLFVAASARGRGNGKQLFDAVVKLARAEGVDRLEWQTPSWNTDAIRFYLQTGALGVSKQRFAIPLR
SIO_010081: MRAD2831_RS63560
subclass of: SO_0000673
so part of: MRAD2831_RS63560
location: complement(31406..31852)
location: region:31406-31852:-1
so has part: feature:31406-31852:-1:exon

WP_012340162.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:31406-31852:-1:exon

MRAD2831_RS63565
type: Gene
subclass of: SO_0000704
RO_0002162: 426355
locus tag: MRAD2831_RS63565
old locus tag: Mrad2831_6431
so part of: sequence
location: complement(31849..32253)
location: region:31849-32253:-1
so has part: feature:31849-32253:-1:exon
subclass of: SO_0000010

position:31849:-1
position: 31849
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:32253:-1
position: 32253
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:31849-32253:-1:exon

MRAD2831_RS63565
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 426355
locus tag: MRAD2831_RS63565
old locus tag: Mrad2831_6431
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006936045.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: rhodanese-like domain-containing protein
translation: MPTAVTVVPPAPSDLAREHFAAEFGFETDCWDVHDSLAQGADFVLLDVRSPALFAAGHVPGAINLPHGKIVRSKLAHWPEGTVFVTYCAGPHCNGAARGALRLAELGRPVKIMAGGMTGWLDEGFALARAGATA
SIO_010081: MRAD2831_RS63565
subclass of: SO_0000673
so part of: MRAD2831_RS63565
location: complement(31849..32253)
location: region:31849-32253:-1
so has part: feature:31849-32253:-1:exon

WP_012340163.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:31849-32253:-1:exon

MRAD2831_RS63570
type: Gene
subclass of: SO_0000704
RO_0002162: 426355
gene: ftrA
locus tag: MRAD2831_RS63570
old locus tag: Mrad2831_6432
so part of: sequence
location: 32326..33336
location: region:32326-33336:1
so has part: feature:32326-33336:1:exon
subclass of: SO_0000010

position:32326:1
position: 32326
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:33336:1
position: 33336
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:32326-33336:1:exon

MRAD2831_RS63570
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 426355
gene: ftrA
locus tag: MRAD2831_RS63570
old locus tag: Mrad2831_6432
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010661357.1
GO function: GO:0003700 - DNA-binding transcription factor activity [Evidence IEA]; GO:0043565 - sequence-specific DNA binding [Evidence IEA]
GO process: GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: transcriptional regulator FtrA
translation: MVRIVPNTTGPLAVALLYDGLCTFEFGIVAEVFGLPRPEMGEAWYRFASCSIEDGPLRAHGGLTLTPDHGIELIDRADIIVVPGWKGSDEPVPEDLRDRLRAAHGRGTRLVSICSGAFVLAATGLLDGGTATTHWRYAEALRERYPTVGVDHASLYRSHGRVFTSAGSAAGLDLLIEIVRQDFGPEAANSVARRLVMPAHRTGGQAQFLERPVPVRRKTEVAPLLDRMRAELGGSWPLTRMAEECRMSLRTFVRRFVEATGSPPGEWLAAERIEEAKRLLAAGHLSVDEIAAVVGLGGADTLRHHFRRRIGISPGEFRTRFGSPHTARSEVPVPSA
SIO_010081: MRAD2831_RS63570
subclass of: SO_0000673
so part of: MRAD2831_RS63570
location: 32326..33336
location: region:32326-33336:1
so has part: feature:32326-33336:1:exon

WP_244413374.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:32326-33336:1:exon

MRAD2831_RS63575
type: Gene
subclass of: SO_0000704
RO_0002162: 426355
locus tag: MRAD2831_RS63575
old locus tag: Mrad2831_6433
so part of: sequence
location: complement(33543..33848)
location: region:33543-33848:-1
so has part: feature:33543-33848:-1:exon
subclass of: SO_0000010

position:33543:-1
position: 33543
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:33848:-1
position: 33848
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:33543-33848:-1:exon

MRAD2831_RS63575
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 426355
locus tag: MRAD2831_RS63575
old locus tag: Mrad2831_6433
inference: COORDINATES: similar to AA sequence:RefSeq:WP_020095770.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MAKIHILPAQPHGVDQFERLRADLAAAHARGADLGSSAPHIQAGGERLLQLCSELEEAIDDLDWWLTEHGLQDQASDKALRQLLSTVQGLVRTTRRFPSGP
SIO_010081: MRAD2831_RS63575
subclass of: SO_0000673
so part of: MRAD2831_RS63575
location: complement(33543..33848)
location: region:33543-33848:-1
so has part: feature:33543-33848:-1:exon

WP_012340165.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:33543-33848:-1:exon

MRAD2831_RS63580
type: Gene
subclass of: SO_0000704
RO_0002162: 426355
locus tag: MRAD2831_RS63580
old locus tag: Mrad2831_6434
so part of: sequence
location: complement(33856..35529)
location: region:33856-35529:-1
so has part: feature:33856-35529:-1:exon
subclass of: SO_0000010

position:33856:-1
position: 33856
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:35529:-1
position: 35529
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:33856-35529:-1:exon

MRAD2831_RS63580
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 426355
locus tag: MRAD2831_RS63580
old locus tag: Mrad2831_6434
inference: COORDINATES: similar to AA sequence:RefSeq:WP_020094454.1
GO component: GO:0016020 - membrane [Evidence IEA]
GO process: GO:0007165 - signal transduction [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: methyl-accepting chemotaxis protein
translation: MNSIRFRLTTSVFALILALICNIALGLYFANQATDNMSQLYSDRIVPLRELKIVADMYAVNIVDTSHKINNGNMEWAKGPPLVAEARERISKTWTAYRATSLTEREKRLVADTEATMVGANAAVKQLSDILAKGDRAPLAEFVRDRLYQTVDPVSASIQSLIDLQIEESQNVYSQFTSLSATMKALRGFTLIFGIAAAGFALFTVLRGVIAPLSSITEMMQRLASGDTTQPVPGISRRDEVGNMAASVQVFKDNLIRTRALEEETALARASAEEQRKAGMRQMADGFEAAVGGVISMVSSSATELQATAQQMTATAQETAAQSTGVAAAAEEASTNVNTVAAAAEELGSSVQEIGRQVTGSAQLAQAAVNEADQTIDLVHALSQNAARIGDMVGMISGIAAQTNLLALNATIEAARAGAAGRGFAVVASEVKALAEQTAKATEEIGRHIGEVQGVTAQAVTAIGGITGRIREIDNVATSIAAAVEQQGAATQEIVRNVAQASAGTNAVTGNIAGVAQASEETGAAASQVLSAASELSRQSEHLGAEVARFLATVRAA
SIO_010081: MRAD2831_RS63580
subclass of: SO_0000673
so part of: MRAD2831_RS63580
location: complement(33856..35529)
location: region:33856-35529:-1
so has part: feature:33856-35529:-1:exon

WP_012340166.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:33856-35529:-1:exon

regulatory
type: Feature
subclass of: SO_0000001
RO_0002162: 426355
regulatory class: riboswitch
inference: COORDINATES: nucleotide motif:Rfam:14.4:RF01750
inference: COORDINATES: profile:INFERNAL:1.1.4
note: ZMP/ZTP riboswitches appear to regulate genes involved in one-carbon metabolism; Derived by automated computational analysis using gene prediction method: cmsearch.
bound moiety: 5-aminoimidazole-4-carboxamide ribonucleotide (ZMP)/ 5-aminoimidazole-4-carboxamide-1-beta-D-ribofuranosyl 5'-triphosphate (ZMT)
so part of: sequence
location: 35858..35938
location: region:35858-35938:1
so has part: feature:35858-35938:1:region

position:35858:1
position: 35858
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:35938:1
position: 35938
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:35858-35938:1:region

MRAD2831_RS63585
type: Gene
subclass of: SO_0000704
RO_0002162: 426355
locus tag: MRAD2831_RS63585
old locus tag: Mrad2831_6435
so part of: sequence
location: 35954..36586
location: region:35954-36586:1
so has part: feature:35954-36586:1:exon
subclass of: SO_0000010

position:35954:1
position: 35954
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:36586:1
position: 36586
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:35954-36586:1:exon

MRAD2831_RS63585
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 426355
locus tag: MRAD2831_RS63585
old locus tag: Mrad2831_6435
inference: COORDINATES: similar to AA sequence:RefSeq:WP_009770762.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: LysE family translocator
translation: MPELSNLLAFAAVALGMVLTPGPNMVYLISRSICQSRTAGLISLGGVALGFVVYMLCAAFGITALVLAVPYAYDAIRIAGAAYLLWLAWQAVRPGGRSPFQVKDLPKDGPAKLFLMGFLTNLLNPKIAVMYLSLLPQFIDPARGSVLGQALALGSTQIVISVLVNAAIAISAGSIALFLTRRPSFAVVQRWVMGTVLAALAVRMATEARR
SIO_010081: MRAD2831_RS63585
subclass of: SO_0000673
so part of: MRAD2831_RS63585
location: 35954..36586
location: region:35954-36586:1
so has part: feature:35954-36586:1:exon

WP_041373190.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:35954-36586:1:exon

MRAD2831_RS63590
type: Gene
subclass of: SO_0000704
RO_0002162: 426355
locus tag: MRAD2831_RS63590
old locus tag: Mrad2831_6436
so part of: sequence
location: complement(36766..37725)
location: region:36766-37725:-1
so has part: feature:36766-37725:-1:exon
subclass of: SO_0000010

position:36766:-1
position: 36766
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:37725:-1
position: 37725
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:36766-37725:-1:exon

MRAD2831_RS63590
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 426355
locus tag: MRAD2831_RS63590
old locus tag: Mrad2831_6436
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012252193.1
GO function: GO:0005215 - transporter activity [Evidence IEA]
GO process: GO:0055085 - transmembrane transport [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DMT family transporter
translation: MPPPVNRTMSASEWAMLLSLSVLWGGSFFFTRVALSALPPLTLVLLRVGLAALILNAVMPLLGLRMPHTARAWAAFFGMGLLNNAIPFCLIVWGQTHIASGLAAILNATTPLFTVVAAHVFTSDERMTGNRLVGVLIGLVGVAVMVGPAVLAGLGTDLLAQVAVLGAALSYAFAGIFGRRFRRMGIPPLATATGQVTASAFMLLPLVLVADRPWTLPLPGASVWGAVVGIAVLSTALAYVLYFRILATAGATNLLLVTFLIPVSAILLGSLVLGERLAPQHFIGMALIGCGLAAIDGRVWAFSQQRRRIPPEMYQGRDI
SIO_010081: MRAD2831_RS63590
subclass of: SO_0000673
so part of: MRAD2831_RS63590
location: complement(36766..37725)
location: region:36766-37725:-1
so has part: feature:36766-37725:-1:exon

WP_012340168.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:36766-37725:-1:exon