Methylobacterium radiotolerans JCM 2831 plasmid pMRAD06, complete sequence.
type: Entry
definition: Methylobacterium radiotolerans JCM 2831 plasmid pMRAD06, complete sequence.
sequence version: NC_010502.1
sequence date: 2023-04-24
sequence: sequence
division: CON
label: NC_010502.1
type: RefSeq
SIO_000068: refseq
dblink: PRJNA224116
dblink: SAMN00000277
keyword: RefSeq
source: Methylobacterium radiotolerans JCM 2831
organism: Methylobacterium radiotolerans JCM 2831
taxonomy: Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales; Methylobacteriaceae; Methylobacterium.
reference: 1
references: 22887658
reference: 2
reference: 3
comment: REFSEQ INFORMATION: The reference sequence is identical to\nCP001007.1.\nURL -- http://www.jgi.doe.gov\nJGI Project ID: 4003781\nSource DNA and bacteria available from Christopher J. Marx\n(cmarx@oeb.harvard.edu)\nContacts: Christopher J. Marx (cmarx@oeb.harvard.edu)\n Paul Richardson (microbes@cuba.jgi-psf.org)\nQuality assurance done by JGI-Stanford\nAnnotation done by JGI-ORNL and JGI-PGF\nFinishing done by JGI-LANL\nFinished microbial genomes have been curated to close all gaps with\ngreater than 98% coverage of at least two independent clones. Each\nbase pair has a minimum q (quality) value of 30 and the total error\nrate is less than one per 50000.\nThe JGI and collaborators endorse the principles for the\ndistribution and use of large scale sequencing data adopted by the\nlarger genome sequencing community and urge users of this data to\nfollow them. it is our intention to publish the work of this\nproject in a timely fashion and we welcome collaborative\ninteraction on the project and analysis.\n(http://www.genome.gov/page.cfm?pageID=10506376).\nThe annotation was added by the NCBI Prokaryotic Genome Annotation\nPipeline (PGAP). Information about PGAP can be found here:\nhttps://www.ncbi.nlm.nih.gov/genome/annotation_prok/\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI RefSeq\nAnnotation Date :: 04/24/2023 01:53:33\nAnnotation Pipeline :: NCBI Prokaryotic Genome\n Annotation Pipeline (PGAP)\nAnnotation Method :: Best-placed reference protein\n set; GeneMarkS-2+\nAnnotation Software revision :: 6.5\nFeatures Annotated :: Gene; CDS; rRNA; tRNA; ncRNA\nGenes (total) :: 6,610\nCDSs (total) :: 6,527\nGenes (coding) :: 6,431\nCDSs (with protein) :: 6,431\nGenes (RNA) :: 83\nrRNAs :: 6, 6, 6 (5S, 16S, 23S)\ncomplete rRNAs :: 6, 6, 6 (5S, 16S, 23S)\ntRNAs :: 60\nncRNAs :: 5\nPseudo Genes (total) :: 96\nCDSs (without protein) :: 96\nPseudo Genes (ambiguous residues) :: 0 of 96\nPseudo Genes (frameshifted) :: 36 of 96\nPseudo Genes (incomplete) :: 74…

sequence
subclass of: SO_0000155
sequence length: 27836
topology: circular
so has quality: SO_0000988
location: 1..27836
location: region:1-27836:1
RO_0002162: 426355

NC_010502
type: RefSeq
SIO_000068: refseq

PRJNA224116
type: BioProject
SIO_000068: bioproject

SAMN00000277
type: BioSample
SIO_000068: biosample

1
title: Complete genome sequences of six strains of the genus Methylobacterium
author: Marx, C.J.
author: Bringel, F.
author: Chistoserdova, L.
author: Moulin, L.
author: Farhan Ul Haque, M.
author: Fleischman, D.E.
author: Gruffaz, C.
author: Jourand, P.
author: Knief, C.
author: Lee, M.C.
author: Muller, E.E.
author: Nadalig, T.
author: Peyraud, R.
author: Roselli, S.
author: Russ, L.
author: Goodwin, L.A.
author: Ivanova, N.
author: Kyrpides, N.
author: Lajus, A.
author: Land, M.L.
author: Medigue, C.
author: Mikhailova, N.
author: Nolan, M.
author: Woyke, T.
author: Stolyar, S.
author: Vorholt, J.A.
author: Vuilleumier, S.
journal: J Bacteriol
volume: 194
issue: 17
pages: 4746-4748
year: 2012
pubmed: 22887658

22887658
type: PubMed
SIO_000068: pubmed

2
title: Complete sequence of plasmid6 of Methylobacterium radiotolerans JCM 2831
author: Copeland, A.
author: Lucas, S.
author: Lapidus, A.
author: Glavina del Rio, T.
author: Dalin, E.
author: Tice, H.
author: Bruce, D.
author: Goodwin, L.
author: Pitluck, S.
author: Kiss, H.
author: Brettin, T.
author: Detter, J.C.
author: Han, C.
author: Kuske, C.R.
author: Schmutz, J.
author: Larimer, F.
author: Land, M.
author: Hauser, L.
author: Kyrpides, N.
author: Mikhailova, N.
author: Marx, C.J.
author: Richardson, P.
journal: Unpublished

3
title: Direct Submission
author: Copeland, A.
author: Lucas, S.
author: Lapidus, A.
author: Glavina del Rio, T.
author: Dalin, E.
author: Tice, H.
author: Bruce, D.
author: Goodwin, L.
author: Pitluck, S.
author: Kiss, H.
author: Brettin, T.
author: Detter, J.C.
author: Han, C.
author: Kuske, C.R.
author: Schmutz, J.
author: Larimer, F.
author: Land, M.
author: Hauser, L.
author: Kyrpides, N.
author: Mikhailova, N.
author: Marx, C.J.
author: Richardson, P.
journal: Submitted (19-MAR-2008) US DOE Joint Genome Institute, 2800 Mitchell Drive B100, Walnut Creek, CA 94598-1698, USA

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:27836:1
position: 27836
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-27836:1:source
so part of: sequence
organism: Methylobacterium radiotolerans JCM 2831
mol type: genomic DNA
strain: JCM 2831
type material: type strain of Methylobacterium radiotolerans
plasmid: pMRAD06

426355
type: Taxonomy
SIO_000068: taxonomy

MRAD2831_RS63740
type: Gene
subclass of: SO_0000704
RO_0002162: 426355
locus tag: MRAD2831_RS63740
old locus tag: Mrad2831_6474
so part of: sequence
location: 3..428
location: region:3-428:1
so has part: feature:3-428:1:exon
subclass of: SO_0000010

position:3:1
position: 3
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:428:1
position: 428
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3-428:1:exon

MRAD2831_RS63740
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 426355
locus tag: MRAD2831_RS63740
old locus tag: Mrad2831_6474
inference: COORDINATES: similar to AA sequence:RefSeq:WP_007568457.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MPIRREHRFFYPIDWPQLSALIRFERARGCCEGCGRPHGRLVYHLGDGRWWDADAGRWRDGRGRRIRLVSGVDILGHARRTRVVLAAAHRDHDTANNTGANLAAFCQRCHMIHDRPEHRRRRWRTLFRRKALGDLFGGPYA
SIO_010081: MRAD2831_RS63740
subclass of: SO_0000673
so part of: MRAD2831_RS63740
location: 3..428
location: region:3-428:1
so has part: feature:3-428:1:exon

WP_012316957.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3-428:1:exon

MRAD2831_RS63745
type: Gene
subclass of: SO_0000704
RO_0002162: 426355
locus tag: MRAD2831_RS63745
old locus tag: Mrad2831_6475
so part of: sequence
location: complement(438..842)
location: region:438-842:-1
so has part: feature:438-842:-1:exon
subclass of: SO_0000010

position:438:-1
position: 438
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:842:-1
position: 842
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:438-842:-1:exon

MRAD2831_RS63745
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 426355
locus tag: MRAD2831_RS63745
old locus tag: Mrad2831_6475
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012340171.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: MucR family transcriptional regulator
translation: MTAHLVSAYVRRNNVPVSDLATLIASAADALIGLRNPDTPAAPAAGKTTPAQIRASITHEALISFEDGRGYKTLKRHLTACGLTPETYRAKWGLPRDYPMVAPGYSERRSAIAMSLQLRNGYHPGTRKTGASRA
SIO_010081: MRAD2831_RS63745
subclass of: SO_0000673
so part of: MRAD2831_RS63745
location: complement(438..842)
location: region:438-842:-1
so has part: feature:438-842:-1:exon

WP_012316958.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:438-842:-1:exon

MRAD2831_RS63750
type: Gene
subclass of: SO_0000704
RO_0002162: 426355
locus tag: MRAD2831_RS63750
old locus tag: Mrad2831_6476
so part of: sequence
location: complement(1121..1360)
location: region:1121-1360:-1
so has part: feature:1121-1360:-1:exon
subclass of: SO_0000010

position:1121:-1
position: 1121
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1360:-1
position: 1360
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1121-1360:-1:exon

MRAD2831_RS63750
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 426355
locus tag: MRAD2831_RS63750
old locus tag: Mrad2831_6476
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012338193.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MPYTLQRLAAGSYDLLLDGDVVGSVVRSLSKGGDVRGWYAELLEAAPPLPAPFTQEAHRFDTLDDTLAWLGGAQIEGGV
SIO_010081: MRAD2831_RS63750
subclass of: SO_0000673
so part of: MRAD2831_RS63750
location: complement(1121..1360)
location: region:1121-1360:-1
so has part: feature:1121-1360:-1:exon

WP_012316959.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1121-1360:-1:exon

MRAD2831_RS63755
type: Gene
subclass of: SO_0000704
RO_0002162: 426355
locus tag: MRAD2831_RS63755
old locus tag: Mrad2831_R0082
so part of: sequence
location: complement(1378..1453)
location: region:1378-1453:-1
so has part: feature:1378-1453:-1:exon
subclass of: SO_0000663

position:1378:-1
position: 1378
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1453:-1
position: 1453
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1378-1453:-1:exon

MRAD2831_RS63755
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 426355
locus tag: MRAD2831_RS63755
old locus tag: Mrad2831_R0082
product: tRNA-Ile
inference: COORDINATES: profile:tRNAscan-SE:2.0.12
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:complement(1418..1420),aa:Ile,seq:cat)
SIO_010081: MRAD2831_RS63755
subclass of: SO_0000673
so part of: MRAD2831_RS63755
location: complement(1378..1453)
location: region:1378-1453:-1
so has part: feature:1378-1453:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1378-1453:-1:exon

MRAD2831_RS63760
type: Gene
subclass of: SO_0000704
RO_0002162: 426355
locus tag: MRAD2831_RS63760
old locus tag: Mrad2831_6477
so part of: sequence
location: complement(1522..1794)
location: region:1522-1794:-1
so has part: feature:1522-1794:-1:exon
subclass of: SO_0000010

position:1522:-1
position: 1522
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1794:-1
position: 1794
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1522-1794:-1:exon

MRAD2831_RS63760
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 426355
locus tag: MRAD2831_RS63760
old locus tag: Mrad2831_6477
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012340147.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MSVPPSEDEDFEHSSLSGPVSNDGETIDLEIYRRAGSQDPWRMEVVHIGGGCTRWSAEFATDQEAVRAFRALVAEHGLAIFASQSSDPQH
SIO_010081: MRAD2831_RS63760
subclass of: SO_0000673
so part of: MRAD2831_RS63760
location: complement(1522..1794)
location: region:1522-1794:-1
so has part: feature:1522-1794:-1:exon

WP_012316960.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1522-1794:-1:exon

MRAD2831_RS63765
type: Gene
subclass of: SO_0000704
RO_0002162: 426355
locus tag: MRAD2831_RS63765
old locus tag: Mrad2831_6478
so part of: sequence
location: complement(1791..2306)
location: region:1791-2306:-1
so has part: feature:1791-2306:-1:exon
subclass of: SO_0000010

position:1791:-1
position: 1791
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2306:-1
position: 2306
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1791-2306:-1:exon

MRAD2831_RS63765
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 426355
locus tag: MRAD2831_RS63765
old locus tag: Mrad2831_6478
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012338195.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MSQDSTLAKALADVRRQRAALEADFERVGAELTKLRLAERSLASIVEGTPLEDLPDEQPRRRASAGDDQARGGRGAGRGPRGPRANSAKGRLKALLEEAGPQGLSHAQISDRLHDVAPNTLATYLSMMTTSGEVERHGDFYRGVASVAEPVADTSDSRDPDGVEHAPAEEG
SIO_010081: MRAD2831_RS63765
subclass of: SO_0000673
so part of: MRAD2831_RS63765
location: complement(1791..2306)
location: region:1791-2306:-1
so has part: feature:1791-2306:-1:exon

WP_012316961.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1791-2306:-1:exon

MRAD2831_RS65985
type: Gene
subclass of: SO_0000704
RO_0002162: 426355
locus tag: MRAD2831_RS65985
old locus tag: Mrad2831_6479
pseudo: true
so part of: sequence
location: complement(<2589..2741)
location: region:2589-2741:-1
so has part: feature:2589-2741:-1:exon
subclass of: SO_0000010

position:2589:-1
position: 2589
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

position:2741:-1
position: 2741
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2589-2741:-1:exon

MRAD2831_RS65985
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 426355
locus tag: MRAD2831_RS65985
old locus tag: Mrad2831_6479
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012457137.1
note: incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: IS6 family transposase
SIO_010081: MRAD2831_RS65985
subclass of: SO_0000673
so part of: MRAD2831_RS65985
location: complement(<2589..2741)
location: region:2589-2741:-1
so has part: feature:2589-2741:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2589-2741:-1:exon

MRAD2831_RS67030
type: Gene
subclass of: SO_0000704
RO_0002162: 426355
locus tag: MRAD2831_RS67030
old locus tag: Mrad2831_6480
so part of: sequence
location: complement(2973..3533)
location: region:2973-3533:-1
so has part: feature:2973-3533:-1:exon
subclass of: SO_0000010

position:2973:-1
position: 2973
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3533:-1
position: 3533
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2973-3533:-1:exon

MRAD2831_RS67030
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 426355
locus tag: MRAD2831_RS67030
old locus tag: Mrad2831_6480
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MNCVELQQALQCSKANGMTYGEMQAVVQLAVGLNVGLYALKELSLPYVLRQRKGLVSLRMALGEAKEIVATIADRIERENKTKDLSRISGRIMRVWRKSTNLQNELDKFLKFMNWCSGISAGISLCVLFYTAHNYGHEADNLIVAIVYLCYLTIPVGVLINLLARHRGGGLLQEQDSIYQDLSRII
SIO_010081: MRAD2831_RS67030
subclass of: SO_0000673
so part of: MRAD2831_RS67030
location: complement(2973..3533)
location: region:2973-3533:-1
so has part: feature:2973-3533:-1:exon

WP_012316963.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2973-3533:-1:exon

MRAD2831_RS67035
type: Gene
subclass of: SO_0000704
RO_0002162: 426355
locus tag: MRAD2831_RS67035
old locus tag: Mrad2831_6481
so part of: sequence
location: complement(4067..4702)
location: region:4067-4702:-1
so has part: feature:4067-4702:-1:exon
subclass of: SO_0000010

position:4067:-1
position: 4067
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4702:-1
position: 4702
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4067-4702:-1:exon

MRAD2831_RS67035
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 426355
locus tag: MRAD2831_RS67035
old locus tag: Mrad2831_6481
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MSQSELDDNTRARQIRRALSYYDEHFTKYLASAIAFSEQIPEEINNQIRNAFTHLARAQEAADQRTFQEEIEKCIGHIERGSRDCLKASIIVARDQLESMISDAVFYYVTLTPDLKARYKEIVNLRREVYRAETRGERGINEKLELILRETIHLQDLIKERYREVGTKKAKLLRFAHRWSHPAYTIVALAIGYISRPYVAMLFSWIQSLVS
SIO_010081: MRAD2831_RS67035
subclass of: SO_0000673
so part of: MRAD2831_RS67035
location: complement(4067..4702)
location: region:4067-4702:-1
so has part: feature:4067-4702:-1:exon

WP_012316964.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4067-4702:-1:exon

MRAD2831_RS67040
type: Gene
subclass of: SO_0000704
RO_0002162: 426355
locus tag: MRAD2831_RS67040
old locus tag: Mrad2831_6482
so part of: sequence
location: complement(4710..4952)
location: region:4710-4952:-1
so has part: feature:4710-4952:-1:exon
subclass of: SO_0000010

position:4710:-1
position: 4710
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4952:-1
position: 4952
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4710-4952:-1:exon

MRAD2831_RS67040
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 426355
locus tag: MRAD2831_RS67040
old locus tag: Mrad2831_6482
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MLTDKSTEAVMTAKLSPPPSLDELLAKHGASKGDTFNDYQDYILEKEKKIKPKLFGRGLLVEGSMHLALGRIMSVKKFFK
SIO_010081: MRAD2831_RS67040
subclass of: SO_0000673
so part of: MRAD2831_RS67040
location: complement(4710..4952)
location: region:4710-4952:-1
so has part: feature:4710-4952:-1:exon

WP_147021521.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4710-4952:-1:exon

MRAD2831_RS67045
type: Gene
subclass of: SO_0000704
RO_0002162: 426355
locus tag: MRAD2831_RS67045
so part of: sequence
location: complement(4960..5190)
location: region:4960-5190:-1
so has part: feature:4960-5190:-1:exon
subclass of: SO_0000010

position:4960:-1
position: 4960
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5190:-1
position: 5190
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4960-5190:-1:exon

MRAD2831_RS67045
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 426355
locus tag: MRAD2831_RS67045
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MATYANLRAHREALGWSIPELISKLEGAAISERSVRRLEDGYGIRPESAHKIFNAISKCYHEPLVREDNVKVVVSE
SIO_010081: MRAD2831_RS67045
subclass of: SO_0000673
so part of: MRAD2831_RS67045
location: complement(4960..5190)
location: region:4960-5190:-1
so has part: feature:4960-5190:-1:exon

WP_147021520.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4960-5190:-1:exon

MRAD2831_RS63775
type: Gene
subclass of: SO_0000704
RO_0002162: 426355
locus tag: MRAD2831_RS63775
old locus tag: Mrad2831_6483
pseudo: true
so part of: sequence
location: complement(<5497..6012)
location: region:5497-6012:-1
so has part: feature:5497-6012:-1:exon
subclass of: SO_0000010

position:5497:-1
position: 5497
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

position:6012:-1
position: 6012
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5497-6012:-1:exon

MRAD2831_RS63775
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 426355
locus tag: MRAD2831_RS63775
old locus tag: Mrad2831_6483
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011950831.1
GO function: GO:0005524 - ATP binding [Evidence IEA]
note: incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: ATP-binding protein
SIO_010081: MRAD2831_RS63775
subclass of: SO_0000673
so part of: MRAD2831_RS63775
location: complement(<5497..6012)
location: region:5497-6012:-1
so has part: feature:5497-6012:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5497-6012:-1:exon

MRAD2831_RS63790
type: Gene
subclass of: SO_0000704
RO_0002162: 426355
locus tag: MRAD2831_RS63790
old locus tag: Mrad2831_6485
so part of: sequence
location: 6234..7417
location: region:6234-7417:1
so has part: feature:6234-7417:1:exon
subclass of: SO_0000010

position:6234:1
position: 6234
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7417:1
position: 7417
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6234-7417:1:exon

MRAD2831_RS63790
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 426355
locus tag: MRAD2831_RS63790
old locus tag: Mrad2831_6485
inference: COORDINATES: similar to AA sequence:RefSeq:WP_076611158.1
ribosomal slippage: true
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: programmed frameshift; Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: IS3 family transposase
translation: MAKTRREFTPEFKREAVALLESSGRPQMQVAAELGIQPSMLRQWRATLNGASPGPRSAGSTGASPPSPVASPSDQAAEIARLRRELDRTRMERDVPKKSYRHLRGDAQVTFAFIEQHARTWPVRLMCRVLGVSPSGFYGWRSRPESARSASNRQLLDDVRRIHAAHHRRYGAPRVHAALRAEGRSVSRGRVERLMRRHGIRALAGRRFRPCTTDSRHDLPIAPNLLKQDFSAARPDTVWLADITYLPTGEGWLYLAAVLDLATRKIVGWSMRDHMRAELSVAALMMAAQRQRPAAGLICHSDRGSQYAAEAYRKQLAAMGARPSMSRSACCYDNAPMESFFHTLKVELVHQRRWATRDEARRDLFAYIEGYYNRQRIHSALGYLTPEQAERTAK
SIO_010081: MRAD2831_RS63790
subclass of: SO_0000673
so part of: MRAD2831_RS63790
location: join(6234..6519,6519..7417)
location: region:6234-7417:1
so has part: feature:6234-6519:1:exon
so has part: feature:6519-7417:1:exon

WP_085985306.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:6234-6519:1:exon

position:6519:1
position: 6519
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:6519-7417:1:exon

MRAD2831_RS63795
type: Gene
subclass of: SO_0000704
RO_0002162: 426355
locus tag: MRAD2831_RS63795
old locus tag: Mrad2831_6486
so part of: sequence
location: complement(7383..8252)
location: region:7383-8252:-1
so has part: feature:7383-8252:-1:exon
subclass of: SO_0000010

position:7383:-1
position: 7383
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8252:-1
position: 8252
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7383-8252:-1:exon

MRAD2831_RS63795
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 426355
locus tag: MRAD2831_RS63795
old locus tag: Mrad2831_6486
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012779287.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MHPNAKLNFDRAAQALGLDPATRDLAWRRMMDIGLTPDDPTVVYLAVGGLLEQAARTIPAALDTVPERVEQAAARAVGPVAEAASARVEAAHAALAERTGAAVATAAAAHLTRMERTRARELGLWAAAIALGCGILCGGAGYWLGHRDTVGLDARWAGLSQRPDASAWLALVAANPDLRDQLSRFCTLAQLKTEAGSNRRYCEVPLWTEGTVAPVGGVPAVIYLSLREWLIAWGPAWLMLGAGLAALVCRRLLRRVVAWRPVAWLLDLILPRCRGHREIISRSSRLVRA
SIO_010081: MRAD2831_RS63795
subclass of: SO_0000673
so part of: MRAD2831_RS63795
location: complement(7383..8252)
location: region:7383-8252:-1
so has part: feature:7383-8252:-1:exon

WP_012316969.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:7383-8252:-1:exon

MRAD2831_RS63800
type: Gene
subclass of: SO_0000704
RO_0002162: 426355
locus tag: MRAD2831_RS63800
old locus tag: Mrad2831_6487
so part of: sequence
location: complement(8273..9103)
location: region:8273-9103:-1
so has part: feature:8273-9103:-1:exon
subclass of: SO_0000010

position:8273:-1
position: 8273
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9103:-1
position: 9103
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8273-9103:-1:exon

MRAD2831_RS63800
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 426355
locus tag: MRAD2831_RS63800
old locus tag: Mrad2831_6487
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012316970.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MARTQQTRTPAASRQKRVVLITSEKGGVGKSVTARTLVEHLRLGGTRVAAYDADGGVGGLLRVLGTRDEAGELLEEQDPTVGVGYYNIRADDQRATLLNCVASGEPLIVHDLAGGSLADLARISDMGEGLDDLLTAFDGQGYRPVVLHLISSEVAATQSVARWIELAGDRVDHVAIRNTRWGKAEADFPFWHGYVDGNGESRGGKVRRRVLEEFGGLEISLPPLPAGTFAKIDADALPFAVAADAPRLTIAERSHVARYLRESAVAFERLRPLLGL
SIO_010081: MRAD2831_RS63800
subclass of: SO_0000673
so part of: MRAD2831_RS63800
location: complement(8273..9103)
location: region:8273-9103:-1
so has part: feature:8273-9103:-1:exon

WP_012316970.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:8273-9103:-1:exon

MRAD2831_RS63805
type: Gene
subclass of: SO_0000704
RO_0002162: 426355
locus tag: MRAD2831_RS63805
old locus tag: Mrad2831_6488
so part of: sequence
location: complement(9155..9814)
location: region:9155-9814:-1
so has part: feature:9155-9814:-1:exon
subclass of: SO_0000010

position:9155:-1
position: 9155
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9814:-1
position: 9814
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9155-9814:-1:exon

MRAD2831_RS63805
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 426355
locus tag: MRAD2831_RS63805
old locus tag: Mrad2831_6488
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010661811.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: SprT-like domain-containing protein
translation: MAVVSYDTTDPTSGTYCGLTEAFAFFNARLFSGRLPHCLITLQRRRKAYGYFANARFTARDGSRLTDEIALNPSHFAERSVEETLSTLVHEMVHLEQEHFGTPPRSSYHNAEWARMMRAVGLIPSATGEPGGKEWGQRVSHFVEPGGRFARACAELLGLHRGIVPYVDADDAAARGTREKKAASKTRYTCPDCGVNAWAKPGTRLACGVCTVPLVVGQL
SIO_010081: MRAD2831_RS63805
subclass of: SO_0000673
so part of: MRAD2831_RS63805
location: complement(9155..9814)
location: region:9155-9814:-1
so has part: feature:9155-9814:-1:exon

WP_041373225.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:9155-9814:-1:exon

MRAD2831_RS63810
type: Gene
subclass of: SO_0000704
RO_0002162: 426355
locus tag: MRAD2831_RS63810
old locus tag: Mrad2831_6489
so part of: sequence
location: complement(10531..10740)
location: region:10531-10740:-1
so has part: feature:10531-10740:-1:exon
subclass of: SO_0000010

position:10531:-1
position: 10531
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:10740:-1
position: 10740
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:10531-10740:-1:exon

MRAD2831_RS63810
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 426355
locus tag: MRAD2831_RS63810
old locus tag: Mrad2831_6489
inference: COORDINATES: similar to AA sequence:RefSeq:WP_007568749.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MGDDVAALLLVLATENAELRQQLGAAQDMLMETAIDAGHLHARLEVLQAERDAWRAEAERLQADRIRVG
SIO_010081: MRAD2831_RS63810
subclass of: SO_0000673
so part of: MRAD2831_RS63810
location: complement(10531..10740)
location: region:10531-10740:-1
so has part: feature:10531-10740:-1:exon

WP_012316972.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:10531-10740:-1:exon

MRAD2831_RS63815
type: Gene
subclass of: SO_0000704
RO_0002162: 426355
locus tag: MRAD2831_RS63815
old locus tag: Mrad2831_6490
so part of: sequence
location: complement(10834..11712)
location: region:10834-11712:-1
so has part: feature:10834-11712:-1:exon
subclass of: SO_0000010

position:10834:-1
position: 10834
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:11712:-1
position: 11712
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:10834-11712:-1:exon

MRAD2831_RS63815
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 426355
locus tag: MRAD2831_RS63815
old locus tag: Mrad2831_6490
inference: COORDINATES: similar to AA sequence:RefSeq:WP_007568938.1
GO function: GO:0003700 - DNA-binding transcription factor activity [Evidence IEA]
GO process: GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: GntR family transcriptional regulator
translation: MFAEEIRRQVEIVPQAALPVVTAALWRAYGEGKITEAEAEALSGLIEARTISAPQRRENLSVSQVLNSPSPAASNVGTAHISGPHSPKPMASLGTVGASHNSARRPGVGSHPRTDASMERRRRWAASGRLPPGLAARFTLAEQAVLALVAAETVRRKDCRLAVGHLAAIVGVAETTVRNAIREAVKLGLVTVEERRITGFRNDTNIVRIVSREWAAWLRLARKNVPRNEQAPATLNQGGGCKSANRTPTKVLVLSESGKTESKKGCREAAGDLARATPSRIRAGRGTGRAMR
SIO_010081: MRAD2831_RS63815
subclass of: SO_0000673
so part of: MRAD2831_RS63815
location: complement(10834..11712)
location: region:10834-11712:-1
so has part: feature:10834-11712:-1:exon

WP_012316973.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:10834-11712:-1:exon

MRAD2831_RS63820
type: Gene
subclass of: SO_0000704
RO_0002162: 426355
locus tag: MRAD2831_RS63820
old locus tag: Mrad2831_6491
so part of: sequence
location: 12302..12961
location: region:12302-12961:1
so has part: feature:12302-12961:1:exon
subclass of: SO_0000010

position:12302:1
position: 12302
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:12961:1
position: 12961
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:12302-12961:1:exon

MRAD2831_RS63820
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 426355
locus tag: MRAD2831_RS63820
old locus tag: Mrad2831_6491
inference: COORDINATES: similar to AA sequence:RefSeq:WP_007661437.1
GO function: GO:0005524 - ATP binding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ParA family protein
translation: MAVISVCSTKGGVGKTTLVICLADAYARQGGSVAIIDADPNGHVASWRERAGEDCSVDVIADVTEKTVLDRISDAASRYSLVFVDLEGAASQAVTYAIAESDLVLIPSKVSGMDLQEVFRTYEVVQRAEKMLRRPIPARVALTQMSPLQSRVAQHARQEIQSASIPVLRTEVIQRAAYQSIHFTGATPAHPNGDPKALQEVAGALGELLEVLSVQQEAA
SIO_010081: MRAD2831_RS63820
subclass of: SO_0000673
so part of: MRAD2831_RS63820
location: 12302..12961
location: region:12302-12961:1
so has part: feature:12302-12961:1:exon

WP_012316974.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:12302-12961:1:exon

MRAD2831_RS64595
type: Gene
subclass of: SO_0000704
RO_0002162: 426355
locus tag: MRAD2831_RS64595
old locus tag: Mrad2831_6492
pseudo: true
so part of: sequence
location: complement(13668..15126)
location: region:13668-15126:-1
so has part: feature:13668-15126:-1:exon
subclass of: SO_0000010

position:13668:-1
position: 13668
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:15126:-1
position: 15126
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:13668-15126:-1:exon

MRAD2831_RS64595
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 426355
locus tag: MRAD2831_RS64595
old locus tag: Mrad2831_6492
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012631283.1
GO function: GO:0003677 - DNA binding [Evidence IEA]; GO:0004803 - transposase activity [Evidence IEA]
GO process: GO:0006313 - transposition, DNA-mediated [Evidence IEA]
note: frameshifted; internal stop; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: IS1182 family transposase
SIO_010081: MRAD2831_RS64595
subclass of: SO_0000673
so part of: MRAD2831_RS64595
location: complement(13668..15126)
location: region:13668-15126:-1
so has part: feature:13668-15126:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:13668-15126:-1:exon

MRAD2831_RS66400
type: Gene
subclass of: SO_0000704
RO_0002162: 426355
locus tag: MRAD2831_RS66400
pseudo: true
so part of: sequence
location: <15242..15343
location: region:15242-15343:1
so has part: feature:15242-15343:1:exon
subclass of: SO_0000010

position:15242:1
position: 15242
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

position:15343:1
position: 15343
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:15242-15343:1:exon

MRAD2831_RS66400
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 426355
locus tag: MRAD2831_RS66400
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012340144.1
note: incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: IS5/IS1182 family transposase
SIO_010081: MRAD2831_RS66400
subclass of: SO_0000673
so part of: MRAD2831_RS66400
location: <15242..15343
location: region:15242-15343:1
so has part: feature:15242-15343:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:15242-15343:1:exon

MRAD2831_RS63830
type: Gene
subclass of: SO_0000704
RO_0002162: 426355
locus tag: MRAD2831_RS63830
old locus tag: Mrad2831_6493
so part of: sequence
location: 16519..21705
location: region:16519-21705:1
so has part: feature:16519-21705:1:exon
subclass of: SO_0000010

position:16519:1
position: 16519
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:21705:1
position: 21705
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:16519-21705:1:exon

MRAD2831_RS63830
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 426355
locus tag: MRAD2831_RS63830
old locus tag: Mrad2831_6493
inference: COORDINATES: protein motif:HMM:NF018319.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: calcium-binding protein
translation: MFDNITPDSDGARRLTKSNFVSGWQGLGGSGSFGLLVYQSNVQDDYDDYIERSYVWNSTSFKLNDSVTFVVNADGTKSIERYSILPWYQGKGKDEFDFESDEPKAQLINPILKKTIDPSGIGRTVDLVFDNTPVPTRTYTSDSFLADQREVSSWSGADPSLITQGKALVDDLFDKGISRFLDKSGNPRPIFYGTTGNDVLSEKTAESSLTDVLISKIKPYQKNGLVLIGGDGNDEITGGGNSDRLLGGDGDDILFGGRMQDGYSSGSPDGEPQVIDNSDKDDGKKDILEGGKGSDTYYVNSRYSVDNALTVSDGSTAVAGLETSPIDTILDSDGNGKVVLRFDYSEANENGVNTDIARYGESITLSGVWDRKDELDKYYGGQVFTWAASENFDLVGVLAENGSLYIFNQFNDHGNYALAEIKNFGSATGGGSSGAFLGISLSGGNPSGNGSGTGTGTGSGSGGTGTGTGTGSGSGGTGTGTGTGTGSGSGGTGTGTGTGSGSGGTGTGTGTGTGSGSGGTGTGTGSGSGGTGTGTGTGTGSGSGDTGTGTGTGNGSGDTGTGTGTGNGSGDTGTGTGTGNGSGDTGTGTGTGNGSGDTGTGAGTGNGSGGSSGTVTLAGTDGADRLVGTPAADVISGGKGDDYLSGGDGGDTYLYNRGDGADTIDDNNWGGTAGDDRIVFGAGISQSDLSFSSYGTDLIIKIAGSSDQIRVSDGLYGAINNPNDGVDRIEKFVFADGSQLDMNTVQQGLLTGTDGNDNITGYATADAITGGKGDDYLSGRGGGDTYLYNRGDGADVIDDNNWANTGDDDQIVFGAGISQSDLSFSSYGTDLIIKIAGTNDQIRVSDGLWAAVNEPSNNVDRIEKFVFADGSQLDMNTVQLGLLTGTDGNDNITGYATADAITGGKGDDYLSGHGGGDTYLYSRGDGSDTIDDNNWGGTAGDDQIVFGAGISQNDLGFYRDGTNLIIKIAGTSDQIRVSDGLWAAINDPSNNVDRIERFVFAGGSQISMSTIEQNLLSNNGGSNGGYVPGDSSGTGSGGAGTDNPPMGGGSGGGSGTPATGGAGSSGGGGAAGDPPASGSAGGSGGGTPSTGGSNGSGGTGGSSGGGSSPDAVTLAGTDGADRLVGTPAADVISGGKGDDYLSGGDGGDTYLYNRGDGADTIDDNNWGGTAGDDRIVFGAGISQSDLSFSSYGTDLIIKIAGSSDQIRVSDGLYGAINNPNDGVDRIEKFVFADGSQLDMNTVQQGLLTGTDGNDNITGYATADAITGGKGDDYLSGRGGGDTYLYNRGDGADVIDDNNWANTGDDDQIVFGAGISQSDLSFSSYGTDLIIKIAGTNDQIRVSDGLYGAINNPNDGVDRIEKFVFADGSQLDMNAVQLGLLTGTDGNDNITGYTTADAITGGKGDDYLSGRGGGDTYLFNRGDGSDTIDDNNWANTGDDDQIVFGAGISRNDIEFYRDGTNLIIKIAGTNDQIRVSDGLWAAINDPSNNVDRIERFVFAGGSQISMSTIEQNLLGTDGGSNGDDGSGTGSSGGSGNSLPMAGRQSRIRTMSASDGNETASAGEGTAENVTLDSDYDGKSDDSSLTSGTDKQDAASSDTTGVEKSGDSSTSASKSTELRGTDGPDNINGFETDDIIAGGMGDDNLSGRGGADIFVFGPASGNDVINDFHGSGSAHDLIQFDHSIFADASSVLAASTQVGSDIVITISSHDTIVLRDTQLSALSTNDFRIA
SIO_010081: MRAD2831_RS63830
subclass of: SO_0000673
so part of: MRAD2831_RS63830
location: 16519..21705
location: region:16519-21705:1
so has part: feature:16519-21705:1:exon

WP_158682028.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:16519-21705:1:exon

MRAD2831_RS63835
type: Gene
subclass of: SO_0000704
RO_0002162: 426355
locus tag: MRAD2831_RS63835
old locus tag: Mrad2831_6494
so part of: sequence
location: 21800..23965
location: region:21800-23965:1
so has part: feature:21800-23965:1:exon
subclass of: SO_0000010

position:21800:1
position: 21800
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:23965:1
position: 23965
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:21800-23965:1:exon

MRAD2831_RS63835
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 426355
locus tag: MRAD2831_RS63835
old locus tag: Mrad2831_6494
inference: COORDINATES: similar to AA sequence:RefSeq:WP_018241109.1
GO process: GO:0030253 - protein secretion by the type I secretion system [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: type I secretion system permease/ATPase
translation: MLKPALIPDQAEPVDTGIRALCAIAGYYRIATEPDHIRRELALDRTNADVSSLLRGAKLSGLKARVVRIRNRKRLSRLPVPAIIRLKDHSFSVYSGVSPAGNFRLVDPVSRIAQDLPYEQFTDTVTDEIILVQRQFRGSGIDPTTFGFRWFLPSIWRYRSPIAHVLIASLFVQIFALVTPLFFQVIVDKVLVHKGYSTLLVIVAGLAVIGLFDVVLQFLRTYALSHTTNRIDVELGQRLFRHLLNLPLGYFETRSAGQTVARMRELETIRAFLTGQGLFSAIDLIFTIIFIAVLLAYSVNLTVIVLISIPIYLVISALFRPALRDTIKAKFDRGAESQQFLVEAVVGIQTLKASAVEPMMRAQWEERLAAYVRTSFSATLLAAGGQNAIQYVSKLTSAALMLFGAKAVIDGDLTVGELVAFNMIAGQVAQPILRLSQIWQDYQQVQISVDRLGDILNAPPEQTSKASAGLPPPKGAIELRNVSFAYRPGAHDVLQDVSLAIRPGEVVGIVGSSGSGKSTLTKLVQRLYTPREGQILVDGIDIAQTDPAWLRSNVGVVLQENLLFNRTIHDNIAFANPAMPRAAVMNVARLAGADEFINRLPMGYDTQIEERGANLSGGQRQRIAIARALATNPRILIFDEATSALDYESERVIQTNMRQIVRGRTVIIIAHRLATVRPCNRIVGMAEGRIVEVGSHEDLLRRQGGLYARLWALQTDQAMAS
SIO_010081: MRAD2831_RS63835
subclass of: SO_0000673
so part of: MRAD2831_RS63835
location: 21800..23965
location: region:21800-23965:1
so has part: feature:21800-23965:1:exon

WP_012316976.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:21800-23965:1:exon

MRAD2831_RS66005
type: Gene
subclass of: SO_0000704
RO_0002162: 426355
locus tag: MRAD2831_RS66005
old locus tag: Mrad2831_6495
so part of: sequence
location: 23965..25404
location: region:23965-25404:1
so has part: feature:23965-25404:1:exon
subclass of: SO_0000010

position:25404:1
position: 25404
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:23965-25404:1:exon

MRAD2831_RS66005
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 426355
locus tag: MRAD2831_RS66005
old locus tag: Mrad2831_6495
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012382862.1
GO process: GO:0030253 - protein secretion by the type I secretion system [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: HlyD family type I secretion periplasmic adaptor subunit
translation: MSATVIAMPRAQRSASQDAEFLPAALEVLERPPSPVRMALILVIAAFFSTALLWSYFGRIDVVAVAQGKIQPTGRVKVVQPIEAGRIRSIRVENGQRVQANDVLIEFDATEALAEETALRFAHAAYRAEALRRKAAIGRVRSFQATPPAIAWDPEIPDTIREREEHVLAGDLRQLDTTVASLIAQRRLKEAERERLRETIKAQRALVATLVERVNMRTTLVDKNSGTRASVIDSMETYLTQQATLAAEQGQLGETEAAIEVASQEILKAKDGFLADNLQKLAEAQRQADDAGQRLARARAHTEHMTIRAPIAGLVNASSVTTVGQVASVGEELMRIVPDGSQLEIEAYLPNKDIGFVHPDQEAEIKIESLPFTRYGTVSGTVLQVASDAIPEPDAQQVEGNPSKSSRSIGFTGGGQRTQNLVFPVIVRPNAKSIFADGRDISLSPGMSVAIEIKTGRRRILEYIFSPLVEIGATAFHER
SIO_010081: MRAD2831_RS66005
subclass of: SO_0000673
so part of: MRAD2831_RS66005
location: 23965..25404
location: region:23965-25404:1
so has part: feature:23965-25404:1:exon

WP_012316977.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:23965-25404:1:exon

MRAD2831_RS67050
type: Gene
subclass of: SO_0000704
RO_0002162: 426355
locus tag: MRAD2831_RS67050
old locus tag: Mrad2831_6496
so part of: sequence
location: complement(25961..27019)
location: region:25961-27019:-1
so has part: feature:25961-27019:-1:exon
subclass of: SO_0000010

position:25961:-1
position: 25961
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:27019:-1
position: 27019
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:25961-27019:-1:exon

MRAD2831_RS67050
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 426355
locus tag: MRAD2831_RS67050
old locus tag: Mrad2831_6496
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MRCAYAVLISLLATSAIAANDFVAKSDISTKNYNDLSSSNPDIPKDVADAIKAAANVKDVIPISGSESFAQQVVKSDEIVFDRGSHLVIKNLSAPWIAIAAKNIKFRDPINYSFIERDYTITSAPDGKNGATGAKGPDDFGETNRRGNDGHPGGPGLAGSAGSSMPLPTIYIIAGKLLDDKNQEIPAGILNLAVLARGVDGGMGGTGGRGGNGGHAGNGKEGASGGFDCKEGPGPGGNGGVAGMGGPGGPGGAGSDGGTIIFVSLKQGAETFTYARVNNQGGIGGIGGRGGPPGSPGAGGGGAGRNGWCGPSGPGSPGTYPSPVNYGDGKNGPDGKKGEMRVISVPNIDIFF
SIO_010081: MRAD2831_RS67050
subclass of: SO_0000673
so part of: MRAD2831_RS67050
location: complement(25961..27019)
location: region:25961-27019:-1
so has part: feature:25961-27019:-1:exon

WP_012316978.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:25961-27019:-1:exon

MRAD2831_RS63845
type: Gene
subclass of: SO_0000704
RO_0002162: 426355
locus tag: MRAD2831_RS63845
old locus tag: Mrad2831_6497
so part of: sequence
location: 27253..27834
location: region:27253-27834:1
so has part: feature:27253-27834:1:exon
subclass of: SO_0000010

position:27253:1
position: 27253
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:27834:1
position: 27834
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:27253-27834:1:exon

MRAD2831_RS63845
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 426355
locus tag: MRAD2831_RS63845
old locus tag: Mrad2831_6497
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012340176.1
GO function: GO:0003677 - DNA binding [Evidence IEA]; GO:0000150 - DNA strand exchange activity [Evidence IEA]
GO process: GO:0006310 - DNA recombination [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: recombinase family protein
translation: MLVGYARVSTQDQNLDLQRDALTKAGCERLFEEKKSGKAGTKRPAFEAALAFLRPEDVLVVWKLDRLGRSLVEMMRTIDGLRVKEIHFRSLTEQFDSATAHGRFALQMHGAMAEYFLDLNRERTMEGLKAALARGRKGGRPKKLKEADLEAARAMLAAGTISVAEIAKRLGVNRDTFYSYFPRARANACSDKA
SIO_010081: MRAD2831_RS63845
subclass of: SO_0000673
so part of: MRAD2831_RS63845
location: 27253..27834
location: region:27253-27834:1
so has part: feature:27253-27834:1:exon

WP_012316979.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:27253-27834:1:exon