Helianthus annuus mitochondrion, complete genome.
type: Entry
definition: Helianthus annuus mitochondrion, complete genome.
sequence version: NC_023337.1
sequence date: 2023-04-03
sequence: sequence
division: PLN
label: NC_023337.1
type: RefSeq
SIO_000068: refseq
dblink: PRJNA927338
keyword: RefSeq
source: mitochondrion Helianthus annuus (common sunflower)
organism: Helianthus annuus
taxonomy: Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Heliantheae alliance; Heliantheae; Helianthus.
reference: 1
references: 24245977
reference: 2
reference: 3
reference: 4
comment: PROVISIONAL REFSEQ: This record has not yet been subject to final\nNCBI review. The reference sequence is identical to KF815390.\n\n##Assembly-Data-START##\nAssembly Method :: SOAPdenovo v. 1.05\nSequencing Technology :: 454; Illumina\n##Assembly-Data-END##\nCOMPLETENESS: full length.

sequence
subclass of: SO_0000819
sequence length: 300945
topology: circular
so has quality: SO_0000988
location: 1..300945
location: region:1-300945:1
RO_0002162: 4232

NC_023337
type: RefSeq
SIO_000068: refseq

PRJNA927338
type: BioProject
SIO_000068: bioproject

1
title: Genome skimming reveals the origin of the Jerusalem Artichoke tuber crop species: neither from Jerusalem nor an artichoke
author: Bock, D.G.
author: Kane, N.C.
author: Ebert, D.P.
author: Rieseberg, L.H.
journal: New Phytol.
volume: 201
issue: 3
pages: 1021-1030
year: 2014
pubmed: 24245977

24245977
type: PubMed
SIO_000068: pubmed

2
title: Mitochondrial Genome of Helianthus annuus
author: Grassa, C.J.
author: Ebert, D.P.
author: Kane, N.C.
author: Rieseberg, L.H.
journal: Unpublished

3
title: Direct Submission
journal: Submitted (17-JAN-2018) National Center for Biotechnology Information, NIH, Bethesda, MD 20894, USA

4
title: Direct Submission
author: Grassa, C.J.
author: Ebert, D.P.
author: Kane, N.C.
author: Rieseberg, L.H.
journal: Submitted (06-NOV-2013) Botany, University of British Columbia, 6270 University Blvd, Vancouver, BC V6T 1Z4, Canada

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:300945:1
position: 300945
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-300945:1:source
so part of: sequence
organism: Helianthus annuus
organelle: mitochondrion
mol type: genomic DNA
cultivar: HA412
note: cytoplasmic fertile

4232
type: Taxonomy
SIO_000068: taxonomy

AT66_t01
type: Gene
subclass of: SO_0000704
RO_0002162: 4232
gene: trnY
locus tag: AT66_t01
so part of: sequence
location: complement(5703..5785)
location: region:5703-5785:-1
so has part: feature:5703-5785:-1:exon
subclass of: SO_0000663

18251007
type: Gene
SIO_000068: ncbigene

position:5703:-1
position: 5703
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5785:-1
position: 5785
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5703-5785:-1:exon

AT66_t01
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 4232
gene: trnY
locus tag: AT66_t01
product: tRNA-Tyr
SIO_010081: AT66_t01
subclass of: SO_0000673
so part of: AT66_t01
location: complement(5703..5785)
location: region:5703-5785:-1
so has part: feature:5703-5785:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5703-5785:-1:exon

AT66_t02
type: Gene
subclass of: SO_0000704
RO_0002162: 4232
gene: trnN
locus tag: AT66_t02
so part of: sequence
location: complement(6588..6659)
location: region:6588-6659:-1
so has part: feature:6588-6659:-1:exon
subclass of: SO_0000663

18250998
type: Gene
SIO_000068: ncbigene

position:6588:-1
position: 6588
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6659:-1
position: 6659
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6588-6659:-1:exon

AT66_t02
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 4232
gene: trnN
locus tag: AT66_t02
product: tRNA-Asn
SIO_010081: AT66_t02
subclass of: SO_0000673
so part of: AT66_t02
location: complement(6588..6659)
location: region:6588-6659:-1
so has part: feature:6588-6659:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6588-6659:-1:exon

AT66_t03
type: Gene
subclass of: SO_0000704
RO_0002162: 4232
gene: trnC
locus tag: AT66_t03
so part of: sequence
location: complement(8691..8761)
location: region:8691-8761:-1
so has part: feature:8691-8761:-1:exon
subclass of: SO_0000663

18250985
type: Gene
SIO_000068: ncbigene

position:8691:-1
position: 8691
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8761:-1
position: 8761
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8691-8761:-1:exon

AT66_t03
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 4232
gene: trnC
locus tag: AT66_t03
product: tRNA-Cys
SIO_010081: AT66_t03
subclass of: SO_0000673
so part of: AT66_t03
location: complement(8691..8761)
location: region:8691-8761:-1
so has part: feature:8691-8761:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:8691-8761:-1:exon

AT66_p26
type: Gene
subclass of: SO_0000704
RO_0002162: 4232
gene: ccmC
locus tag: AT66_p26
so part of: sequence
location: complement(15284..16027)
location: region:15284-16027:-1
so has part: feature:15284-16027:-1:exon
subclass of: SO_0000010

18250987
type: Gene
SIO_000068: ncbigene

position:15284:-1
position: 15284
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:16027:-1
position: 16027
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:15284-16027:-1:exon

AT66_p26
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 4232
gene: ccmC
locus tag: AT66_p26
codon start: 1
product: cytochrome c biogenesis C
translation: MSLSLLQPSFLMSKTRSYAKIFIGSRLFLTAMAIHLSLRVAPLDLQQGGNSRIPYVHVPAARMSILVYIATAINTFLFLLTKHPLFLRSFGTGTEMGAFSTLFTLVTGGFRGRPMWGTFWVWDARLTSVLISFLIYMGALRFQKLPIEPAPISIRAGPIDIPIIKSSVNWWNTSHQPGSISRYGTSIHVPMPIPILSNFANSPFSTRILFVLETRLLIPSFLESPLTEEIEAQEGIPKPSSLAGIHG
SIO_010081: AT66_p26
subclass of: SO_0000673
so part of: AT66_p26
location: complement(15284..16027)
location: region:15284-16027:-1
so has part: feature:15284-16027:-1:exon

YP_008999552.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:15284-16027:-1:exon

AT66_p25
type: Gene
subclass of: SO_0000704
RO_0002162: 4232
gene: atp4
locus tag: AT66_p25
so part of: sequence
location: complement(27923..28498)
location: region:27923-28498:-1
so has part: feature:27923-28498:-1:exon
subclass of: SO_0000010

18251000
type: Gene
SIO_000068: ncbigene

position:27923:-1
position: 27923
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:28498:-1
position: 28498
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:27923-28498:-1:exon

AT66_p25
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 4232
gene: atp4
locus tag: AT66_p25
codon start: 1
product: ATPase subunit 4
translation: MRLSSTNMQARKMLFAAILSICASSSKKISIYNEEMIVARCFIGFIIFSRKSLGKTFKVTLDGRIQAIQEESQQFLNPNEVVPPESNEQQRLLRISLRICGTVVESLPMARSAPKCEKTVQALLCRNLNVKSATLPNATSSRRIRLQDDLVTGFHFSVSERFVPGSTLKASIVELIREGLVVLRRVRVGAE
SIO_010081: AT66_p25
subclass of: SO_0000673
so part of: AT66_p25
location: complement(27923..28498)
location: region:27923-28498:-1
so has part: feature:27923-28498:-1:exon

YP_008999553.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:27923-28498:-1:exon

AT66_p24
type: Gene
subclass of: SO_0000704
RO_0002162: 4232
gene: nad4L
locus tag: AT66_p24
so part of: sequence
location: complement(28678..28950)
location: region:28678-28950:-1
so has part: feature:28678-28950:-1:exon
subclass of: SO_0000010

18251003
type: Gene
SIO_000068: ncbigene

position:28678:-1
position: 28678
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:28950:-1
position: 28950
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:28678-28950:-1:exon

AT66_p24
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 4232
gene: nad4L
locus tag: AT66_p24
codon start: 1
product: NADH dehydrogenase subunit 4L
translation: MIISISGIRGILLNRRNIPIMSMPIESMLLAVNSNFLVFSVSSDDMMGQSFASLVPTVAAAESAIGLAIFVITFRVRGTIAVESINSIQG
SIO_010081: AT66_p24
subclass of: SO_0000673
so part of: AT66_p24
location: complement(28678..28950)
location: region:28678-28950:-1
so has part: feature:28678-28950:-1:exon

YP_008999554.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:28678-28950:-1:exon

AT66_p23
type: Gene
subclass of: SO_0000704
RO_0002162: 4232
gene: atp8
locus tag: AT66_p23
so part of: sequence
location: 36771..37250
location: region:36771-37250:1
so has part: feature:36771-37250:1:exon
subclass of: SO_0000010

18250969
type: Gene
SIO_000068: ncbigene

position:36771:1
position: 36771
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:37250:1
position: 37250
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:36771-37250:1:exon

AT66_p23
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 4232
gene: atp8
locus tag: AT66_p23
codon start: 1
product: ATPase subunit 8
translation: MPQLDKFTYFTQFFWSCLFLFTFYIAICNDGDGLLGISRILKLRNQLLSHRTNNIRSKDPNSLEDILRKGFSTGLSYMYSSLFEVSQWCKAVDLLGKRRKITLISCFGEISGSRGMERNIFYLISKSSYSTSSNPGWGITCRNDIMLIHVPHGQGSIGF
SIO_010081: AT66_p23
subclass of: SO_0000673
so part of: AT66_p23
location: 36771..37250
location: region:36771-37250:1
so has part: feature:36771-37250:1:exon

YP_008999555.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:36771-37250:1:exon

AT66_p22
type: Gene
subclass of: SO_0000704
RO_0002162: 4232
gene: coxIII
locus tag: AT66_p22
so part of: sequence
location: 37820..38617
location: region:37820-38617:1
so has part: feature:37820-38617:1:exon
subclass of: SO_0000010

18251005
type: Gene
SIO_000068: ncbigene

position:37820:1
position: 37820
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:38617:1
position: 38617
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:37820-38617:1:exon

AT66_p22
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 4232
gene: coxIII
locus tag: AT66_p22
codon start: 1
product: cytochrome c oxidase subunit 3
translation: MIESQRHSYHLVDPSPWPISGSLGALATTVGGVMYMHSFQGGATLLSLGLIFILYTMFVWWRDVLRESTLEGHHTKVVQLGPRYGFILFIVSEVMFLFALFRASSHSSLAPTVEIGGIWPPKGIAVLDPREIPFLNTLIPLSSGAAVTWAHHAILAGKEKRAVYALVATVSLALVFTAFQGMEYYQAPSTISDSIYGSTFFLATGFHGFHVIIGTLFSIVCGIRQYLGHLTKEHHVGFEAAAWYWHFVDVVRLFPFVSIYWWGGI
SIO_010081: AT66_p22
subclass of: SO_0000673
so part of: AT66_p22
location: 37820..38617
location: region:37820-38617:1
so has part: feature:37820-38617:1:exon

YP_008999556.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:37820-38617:1:exon

AT66_p21
type: Gene
subclass of: SO_0000704
RO_0002162: 4232
gene: rpl5
locus tag: AT66_p21
so part of: sequence
location: complement(42934..43497)
location: region:42934-43497:-1
so has part: feature:42934-43497:-1:exon
subclass of: SO_0000010

18250967
type: Gene
SIO_000068: ncbigene

position:42934:-1
position: 42934
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:43497:-1
position: 43497
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:42934-43497:-1:exon

AT66_p21
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 4232
gene: rpl5
locus tag: AT66_p21
codon start: 1
product: ribosomal protein L5
translation: MFTLHFHYEDVSRQDPLLKPNHANVMEVPGSCKIRVVPKAAPSDFIIKNGKLAMEIPCGQKLIQTQRASTGKSFRSNPFLGSNKEKKGYVSDLARQSTLRGHGMSHFLVKISAVMSLLDFPVEIREKSIQFLMEMEFCEFSPELEDHFEIFEHIRGFHVTILTSANTQDETLPPWSGFFQKDEGESQ
SIO_010081: AT66_p21
subclass of: SO_0000673
so part of: AT66_p21
location: complement(42934..43497)
location: region:42934-43497:-1
so has part: feature:42934-43497:-1:exon

YP_008999557.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:42934-43497:-1:exon

AT66_t04
type: Gene
subclass of: SO_0000704
RO_0002162: 4232
gene: trnD
locus tag: AT66_t04
so part of: sequence
location: 51553..51626
location: region:51553-51626:1
so has part: feature:51553-51626:1:exon
subclass of: SO_0000663

18250977
type: Gene
SIO_000068: ncbigene

position:51553:1
position: 51553
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:51626:1
position: 51626
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:51553-51626:1:exon

AT66_t04
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 4232
gene: trnD
locus tag: AT66_t04
product: tRNA-Asp
SIO_010081: AT66_t04
subclass of: SO_0000673
so part of: AT66_t04
location: 51553..51626
location: region:51553-51626:1
so has part: feature:51553-51626:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:51553-51626:1:exon

repeat_region
type: Repeat Region
subclass of: SO_0000657
RO_0002162: 4232
note: large repeat copy 1
so part of: sequence
location: 51682..64614
location: region:51682-64614:1
so has part: feature:51682-64614:1:region

position:51682:1
position: 51682
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:64614:1
position: 64614
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:51682-64614:1:region

AT66_t05
type: Gene
subclass of: SO_0000704
RO_0002162: 4232
gene: trnK
locus tag: AT66_t05
so part of: sequence
location: complement(64486..64558)
location: region:64486-64558:-1
so has part: feature:64486-64558:-1:exon
subclass of: SO_0000663

18250986
type: Gene
SIO_000068: ncbigene

position:64486:-1
position: 64486
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:64558:-1
position: 64558
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:64486-64558:-1:exon

AT66_t05
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 4232
gene: trnK
locus tag: AT66_t05
product: tRNA-Lys
SIO_010081: AT66_t05
subclass of: SO_0000673
so part of: AT66_t05
location: complement(64486..64558)
location: region:64486-64558:-1
so has part: feature:64486-64558:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:64486-64558:-1:exon

AT66_p20
type: Gene
subclass of: SO_0000704
RO_0002162: 4232
gene: ccmB
locus tag: AT66_p20
so part of: sequence
location: 66603..67223
location: region:66603-67223:1
so has part: feature:66603-67223:1:exon
subclass of: SO_0000010

18250992
type: Gene
SIO_000068: ncbigene

position:66603:1
position: 66603
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:67223:1
position: 67223
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:66603-67223:1:exon

AT66_p20
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 4232
gene: ccmB
locus tag: AT66_p20
codon start: 1
product: cytochrome c biogenesis B
translation: MRRLFLELYYKQTFPSTPITSFSPFLSYIVVTPLMLGFEKDFSCHSHLGPIRIPPLFPFPSAPFPRNEKEDGTLELYYLSAYCLPKILLLQLVGHRVIQISRVFRGFPMLQLPYQFGRSGMDRLNIPLGSLVLTFLCGIHSRSALGITSSSGGNSSQNPTTSPTSLPPTLSRTSIETEWFHVLSSIGYSFPFVSLSPISVSISSQD
SIO_010081: AT66_p20
subclass of: SO_0000673
so part of: AT66_p20
location: 66603..67223
location: region:66603-67223:1
so has part: feature:66603-67223:1:exon

YP_008999558.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:66603-67223:1:exon

AT66_p19
type: Gene
subclass of: SO_0000704
RO_0002162: 4232
gene: rpl10
locus tag: AT66_p19
so part of: sequence
location: complement(67531..68019)
location: region:67531-68019:-1
so has part: feature:67531-68019:-1:exon
subclass of: SO_0000010

18250999
type: Gene
SIO_000068: ncbigene

position:67531:-1
position: 67531
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:68019:-1
position: 68019
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:67531-68019:-1:exon

AT66_p19
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 4232
gene: rpl10
locus tag: AT66_p19
codon start: 1
product: ribosomal protein L10
translation: MPFGRSLLQRESLLRVSGEERSPEILISFHSSGSTSNQWRKLKNPWFPGRTLFRPSCFRTGKKKRFFAQLAHSAGPTCISYLAEEASDRLEFLPSWDSMDQDLLLLYGQYRSTLVDHMDVEKASHFDELETSLFHFYLPSSYLCFVCSPEEFDLFNLGIPPK
SIO_010081: AT66_p19
subclass of: SO_0000673
so part of: AT66_p19
location: complement(67531..68019)
location: region:67531-68019:-1
so has part: feature:67531-68019:-1:exon

YP_008999559.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:67531-68019:-1:exon

AT66_t06
type: Gene
subclass of: SO_0000704
RO_0002162: 4232
gene: trnM
locus tag: AT66_t06
so part of: sequence
location: 75504..75585
location: region:75504-75585:1
so has part: feature:75504-75585:1:exon
subclass of: SO_0000663

18250975
type: Gene
SIO_000068: ncbigene

position:75504:1
position: 75504
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:75585:1
position: 75585
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:75504-75585:1:exon

AT66_t06
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 4232
gene: trnM
locus tag: AT66_t06
product: tRNA-Met
SIO_010081: AT66_t06
subclass of: SO_0000673
so part of: AT66_t06
location: 75504..75585
location: region:75504-75585:1
so has part: feature:75504-75585:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:75504-75585:1:exon

AT66_t07
type: Gene
subclass of: SO_0000704
RO_0002162: 4232
gene: trnG
locus tag: AT66_t07
so part of: sequence
location: 79517..79589
location: region:79517-79589:1
so has part: feature:79517-79589:1:exon
subclass of: SO_0000663

18250993
type: Gene
SIO_000068: ncbigene

position:79517:1
position: 79517
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:79589:1
position: 79589
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:79517-79589:1:exon

AT66_t07
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 4232
gene: trnG
locus tag: AT66_t07
product: tRNA-Gly
SIO_010081: AT66_t07
subclass of: SO_0000673
so part of: AT66_t07
location: 79517..79589
location: region:79517-79589:1
so has part: feature:79517-79589:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:79517-79589:1:exon

AT66_t08
type: Gene
subclass of: SO_0000704
RO_0002162: 4232
gene: trnQ
locus tag: AT66_t08
so part of: sequence
location: 82782..82853
location: region:82782-82853:1
so has part: feature:82782-82853:1:exon
subclass of: SO_0000663

18250990
type: Gene
SIO_000068: ncbigene

position:82782:1
position: 82782
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:82853:1
position: 82853
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:82782-82853:1:exon

AT66_t08
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 4232
gene: trnQ
locus tag: AT66_t08
product: tRNA-Gln
SIO_010081: AT66_t08
subclass of: SO_0000673
so part of: AT66_t08
location: 82782..82853
location: region:82782-82853:1
so has part: feature:82782-82853:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:82782-82853:1:exon

AT66_t09
type: Gene
subclass of: SO_0000704
RO_0002162: 4232
gene: trnH
locus tag: AT66_t09
so part of: sequence
location: complement(87833..87906)
location: region:87833-87906:-1
so has part: feature:87833-87906:-1:exon
subclass of: SO_0000663

18250988
type: Gene
SIO_000068: ncbigene

position:87833:-1
position: 87833
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:87906:-1
position: 87906
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:87833-87906:-1:exon

AT66_t09
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 4232
gene: trnH
locus tag: AT66_t09
product: tRNA-His
SIO_010081: AT66_t09
subclass of: SO_0000673
so part of: AT66_t09
location: complement(87833..87906)
location: region:87833-87906:-1
so has part: feature:87833-87906:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:87833-87906:-1:exon

AT66_t10
type: Gene
subclass of: SO_0000704
RO_0002162: 4232
gene: trnE
locus tag: AT66_t10
so part of: sequence
location: 89834..89905
location: region:89834-89905:1
so has part: feature:89834-89905:1:exon
subclass of: SO_0000663

18250991
type: Gene
SIO_000068: ncbigene

position:89834:1
position: 89834
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:89905:1
position: 89905
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:89834-89905:1:exon

AT66_t10
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 4232
gene: trnE
locus tag: AT66_t10
product: tRNA-Glu
SIO_010081: AT66_t10
subclass of: SO_0000673
so part of: AT66_t10
location: 89834..89905
location: region:89834-89905:1
so has part: feature:89834-89905:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:89834-89905:1:exon

AT66_p18
type: Gene
subclass of: SO_0000704
RO_0002162: 4232
gene: coxI
locus tag: AT66_p18
so part of: sequence
location: 106128..107822
location: region:106128-107822:1
so has part: feature:106128-107822:1:exon
subclass of: SO_0000010

18250989
type: Gene
SIO_000068: ncbigene

position:106128:1
position: 106128
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:107822:1
position: 107822
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:106128-107822:1:exon

AT66_p18
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 4232
gene: coxI
locus tag: AT66_p18
codon start: 1
product: cytochrome c oxidase subunit 1
translation: MPNNSHAFLGRTKPTISDKSFLIFRARSGTTRKNLNFMTNPVRWLFSTNHKDIGTLYFIFGAIAGVMGTCFSVLIRMELARPGDQILGGNHQLYNVLITAHAFLMIFFMVMPAMIGGSGNWSVPILIGAPDMAFPRLNNISFWLLPPSLLLLLSPALVEVGSGTGWTVYPPLSGITSHSGGAVDSAISSPHLSGISSILGSINFITTISNMRGPGMTMHRSPLFVWSVLVTAFPLLLSLPVLAGAITMLLTDRNFNTTFSDPAGGGDPILYQHLFRFFGHPEVYIPILPGSGIISHIVSTFSGKPVFGYLGMVYAMISIGVPGSLVWAHHMFTVGLDVDTRAYFTAATMIIAVPTGIKIFSWIATMWGGSIQYKTPMLFAVGSIFLFTIGGLTGIVPANSGLDIALHDTYYVVAHFHYVLSMGAVFALFAGFHYWVGKIFGRTYPETLGQIHFWITFFGVNPTFFPMHFLGLSGMPRRIPDYPDAYAGWNALSSSGSYISVVGICRFFVVVTITSSSGNNKRCAPSPWAVEQNPTTPEWMVQSPPAFHTFGELPAIKETKSSVK
SIO_010081: AT66_p18
subclass of: SO_0000673
so part of: AT66_p18
location: 106128..107822
location: region:106128-107822:1
so has part: feature:106128-107822:1:exon

YP_008999560.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:106128-107822:1:exon

AT66_p17
type: Gene
subclass of: SO_0000704
RO_0002162: 4232
gene: nad5
locus tag: AT66_p17
so part of: sequence
location: complement(111735..112934)
location: region:111735-112934:-1
so has part: feature:111735-112934:-1:exon
subclass of: SO_0000010

18250966
type: Gene
SIO_000068: ncbigene

position:111735:-1
position: 111735
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:112934:-1
position: 112934
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:111735-112934:-1:exon

AT66_p17
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 4232
gene: nad5
locus tag: AT66_p17
codon start: 1
product: NADH dehydrogenase subunit 5
translation: MLIVVTSISSLVHLYSISYMSEDPHSPRFMCYLSIPTFFMPMLVTGDNSLQLFLGWEGVGLASYLLIHFWFTRLQADKAAIKAMLVNRVGDFGLAPGISGCFTLFQTVDFSTIFACASVPRNSWISRNMRLNAITLICILLLIGAAGKSAQIGSHTWSPDAMEGPTPVSALIHAATMVTAGVFMIARCSPLFEYPPTALIVITFAGAMTSFLAATTGILQNDLKRVIAYSTCSQLGYMIFACGISNYSVSVFHLMNHAFFKALLFLSAGSVIHAMSDEQDMRKMGGLASSFPFTYAMMLMGSLSLIGFPFPTGFYSKDVILELAYTKYTISGNFAFWLGSVSVLFTSYYSFRSLFLTFLGPTNSFGRDILRCHDAPIPMAIPLILLALGSLFVGYLAKV
SIO_010081: AT66_p17
subclass of: SO_0000673
so part of: AT66_p17
location: complement(111735..112934)
location: region:111735-112934:-1
so has part: feature:111735-112934:-1:exon

YP_008999561.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:111735-112934:-1:exon

AT66_p16
type: Gene
subclass of: SO_0000704
RO_0002162: 4232
gene: atp9
locus tag: AT66_p16
so part of: sequence
location: complement(114341..114601)
location: region:114341-114601:-1
so has part: feature:114341-114601:-1:exon
subclass of: SO_0000010

18250970
type: Gene
SIO_000068: ncbigene

position:114341:-1
position: 114341
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:114601:-1
position: 114601
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:114341-114601:-1:exon

AT66_p16
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 4232
gene: atp9
locus tag: AT66_p16
codon start: 1
product: ATPase subunit 9
translation: MLEGAKLIGAGAATIASAGAAIGIGNVLSSSIHSVARNPSLAKQSFGYAILGFALTEAIASFAPMMAFLISSVFRSKNQRKKVEVS
SIO_010081: AT66_p16
subclass of: SO_0000673
so part of: AT66_p16
location: complement(114341..114601)
location: region:114341-114601:-1
so has part: feature:114341-114601:-1:exon

YP_008999562.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:114341-114601:-1:exon

AT66_p15
type: Gene
subclass of: SO_0000704
RO_0002162: 4232
gene: rps4
locus tag: AT66_p15
so part of: sequence
location: 122115..123110
location: region:122115-123110:1
so has part: feature:122115-123110:1:exon
subclass of: SO_0000010

18251006
type: Gene
SIO_000068: ncbigene

position:122115:1
position: 122115
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:123110:1
position: 123110
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:122115-123110:1:exon

AT66_p15
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 4232
gene: rps4
locus tag: AT66_p15
codon start: 1
product: ribosomal protein S4
translation: MPALRFKTCRLLEGNVWNRELTIIQRRILRRLRNKTRSVKRMIYSRKNLNSYIQLQTTRKLPLFHGDLPITEMHRGTERTSYIPFPLNPETRSDVIPVRLHFSETLPQARQPISHRRLCVNNVIVSITSFQVSQGDFISLKENDAIIYSEIRRSFYIEISVSKIIGKSLDSPVRMWRRTKTEWFRLLKTKRGCRLLLKDPFLQQLRSSMQDEDLERTKKFGSEKVCLGSSFAEHKRIKRNFYHFKSIFLSKRRNEKTLNLTTRKRSPIVYNSSFYSNLTSCSTHQSSMKRKIKSSSLSTHYSEVNHRTPKAVLSYGPNIGHIPHVRQEHIR
SIO_010081: AT66_p15
subclass of: SO_0000673
so part of: AT66_p15
location: 122115..123110
location: region:122115-123110:1
so has part: feature:122115-123110:1:exon

YP_008999563.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:122115-123110:1:exon

AT66_r03
type: Gene
subclass of: SO_0000704
RO_0002162: 4232
gene: rrn26
locus tag: AT66_r03
so part of: sequence
location: 128775..132510
location: region:128775-132510:1
so has part: feature:128775-132510:1:exon
subclass of: SO_0000573

18250981
type: Gene
SIO_000068: ncbigene

position:128775:1
position: 128775
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:132510:1
position: 132510
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:128775-132510:1:exon

AT66_r03
type: Ribosomal RNA
subclass of: SO_0000252
RO_0002162: 4232
gene: rrn26
locus tag: AT66_r03
product: 26S ribosomal RNA
SIO_010081: AT66_r03
subclass of: SO_0000673
so part of: AT66_r03
location: 128775..132510
location: region:128775-132510:1
so has part: feature:128775-132510:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:128775-132510:1:exon

AT66_r02
type: Gene
subclass of: SO_0000704
RO_0002162: 4232
gene: rrn5
locus tag: AT66_r02
so part of: sequence
location: 139908..140023
location: region:139908-140023:1
so has part: feature:139908-140023:1:exon
subclass of: SO_0000573

18250983
type: Gene
SIO_000068: ncbigene

position:139908:1
position: 139908
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:140023:1
position: 140023
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:139908-140023:1:exon

AT66_r02
type: Ribosomal RNA
subclass of: SO_0000252
RO_0002162: 4232
gene: rrn5
locus tag: AT66_r02
product: 5S ribosomal RNA
SIO_010081: AT66_r02
subclass of: SO_0000673
so part of: AT66_r02
location: 139908..140023
location: region:139908-140023:1
so has part: feature:139908-140023:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:139908-140023:1:exon

AT66_p15a
type: Gene
subclass of: SO_0000704
RO_0002162: 4232
gene: rrn18
locus tag: AT66_p15a
so part of: sequence
location: 140166..142111
location: region:140166-142111:1
so has part: feature:140166-142111:1:exon
subclass of: SO_0000573

35414172
type: Gene
SIO_000068: ncbigene

position:140166:1
position: 140166
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:142111:1
position: 142111
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:140166-142111:1:exon

AT66_p15a
type: Ribosomal RNA
subclass of: SO_0000252
RO_0002162: 4232
gene: rrn18
locus tag: AT66_p15a
product: 18S ribosomal RNA
SIO_010081: AT66_p15a
subclass of: SO_0000673
so part of: AT66_p15a
location: 140166..142111
location: region:140166-142111:1
so has part: feature:140166-142111:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:140166-142111:1:exon

AT66_p14
type: Gene
subclass of: SO_0000704
RO_0002162: 4232
gene: rps13
locus tag: AT66_p14
so part of: sequence
location: 149093..149443
location: region:149093-149443:1
so has part: feature:149093-149443:1:exon
subclass of: SO_0000010

18250982
type: Gene
SIO_000068: ncbigene

position:149093:1
position: 149093
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:149443:1
position: 149443
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:149093-149443:1:exon

AT66_p14
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 4232
gene: rps13
locus tag: AT66_p14
codon start: 1
product: ribosomal protein L13
translation: MLYISGARSVADEQVRIASTKIDGIGPKKAILVRYRLGISGNIKIKELTKYQIDQIEQMIGQDHVVHWELKRGERADIERLISISCYRGIRHQDGSPLRGQRTHTNARTCRKQIRK
SIO_010081: AT66_p14
subclass of: SO_0000673
so part of: AT66_p14
location: 149093..149443
location: region:149093-149443:1
so has part: feature:149093-149443:1:exon

YP_008999564.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:149093-149443:1:exon

AT66_p13
type: Gene
subclass of: SO_0000704
RO_0002162: 4232
gene: nad6
locus tag: AT66_p13
so part of: sequence
location: complement(168793..169722)
location: region:168793-169722:-1
so has part: feature:168793-169722:-1:exon
subclass of: SO_0000010

18250979
type: Gene
SIO_000068: ncbigene

position:168793:-1
position: 168793
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:169722:-1
position: 169722
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:168793-169722:-1:exon

AT66_p13
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 4232
gene: nad6
locus tag: AT66_p13
codon start: 1
product: NADH dehydrogenase subunit 6
translation: MILSVLSSLALVSGLMVVRAKNPVHSVLFPIPVFRNTSGLLLLLGLDFFAMIFPVVHIGAIAVSFLFVVMMFHIQIAEIHEEVLRYLPVSGIIGLIFWWEMFFILDNESIPLLPTQRNTTSLRYMVYAGKVRSWTNLETLGNLLYTYYSVWFLVPSLILLVAMIGAIVLTMHRTTKVKRQDVFRRNAIDSRRTIMRGMTDLLKESSLILVRIQFVRWPSWSYRCLDTLLFFSHFRMTVPFHFWYNFKPGPAIRCISRTPGIRRLLLEYHGIEYPDLPEAPEKAISAFRTVKGNSYVPHRSESPPPHNTY
SIO_010081: AT66_p13
subclass of: SO_0000673
so part of: AT66_p13
location: complement(168793..169722)
location: region:168793-169722:-1
so has part: feature:168793-169722:-1:exon

YP_008999565.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:168793-169722:-1:exon

AT66_t11
type: Gene
subclass of: SO_0000704
RO_0002162: 4232
gene: trnP
locus tag: AT66_t11
so part of: sequence
location: complement(170001..170075)
location: region:170001-170075:-1
so has part: feature:170001-170075:-1:exon
subclass of: SO_0000663

18250971
type: Gene
SIO_000068: ncbigene

position:170001:-1
position: 170001
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:170075:-1
position: 170075
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:170001-170075:-1:exon

AT66_t11
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 4232
gene: trnP
locus tag: AT66_t11
product: tRNA-Pro
SIO_010081: AT66_t11
subclass of: SO_0000673
so part of: AT66_t11
location: complement(170001..170075)
location: region:170001-170075:-1
so has part: feature:170001-170075:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:170001-170075:-1:exon

AT66_t12
type: Gene
subclass of: SO_0000704
RO_0002162: 4232
gene: trnF
locus tag: AT66_t12
so part of: sequence
location: complement(170381..170454)
location: region:170381-170454:-1
so has part: feature:170381-170454:-1:exon
subclass of: SO_0000663

18250995
type: Gene
SIO_000068: ncbigene

position:170381:-1
position: 170381
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:170454:-1
position: 170454
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:170381-170454:-1:exon

AT66_t12
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 4232
gene: trnF
locus tag: AT66_t12
product: tRNA-Phe
SIO_010081: AT66_t12
subclass of: SO_0000673
so part of: AT66_t12
location: complement(170381..170454)
location: region:170381-170454:-1
so has part: feature:170381-170454:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:170381-170454:-1:exon

AT66_t13
type: Gene
subclass of: SO_0000704
RO_0002162: 4232
gene: trnS
locus tag: AT66_t13
so part of: sequence
location: complement(170836..170923)
location: region:170836-170923:-1
so has part: feature:170836-170923:-1:exon
subclass of: SO_0000663

18250994
type: Gene
SIO_000068: ncbigene

position:170836:-1
position: 170836
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:170923:-1
position: 170923
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:170836-170923:-1:exon

AT66_t13
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 4232
gene: trnS
locus tag: AT66_t13
product: tRNA-Ser
SIO_010081: AT66_t13
subclass of: SO_0000673
so part of: AT66_t13
location: complement(170836..170923)
location: region:170836-170923:-1
so has part: feature:170836-170923:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:170836-170923:-1:exon

AT66_p12
type: Gene
subclass of: SO_0000704
RO_0002162: 4232
gene: cob
locus tag: AT66_p12
so part of: sequence
location: 188450..189643
location: region:188450-189643:1
so has part: feature:188450-189643:1:exon
subclass of: SO_0000010

18250996
type: Gene
SIO_000068: ncbigene

position:188450:1
position: 188450
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:189643:1
position: 189643
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:188450-189643:1:exon

AT66_p12
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 4232
gene: cob
locus tag: AT66_p12
exception: RNA editing
codon start: 1
product: apocytochrome B
translation: MTIRNQRFSILKQPIFSTLNQHLIDYPTPSNLSYWWGFGPLAGICLVIQIVTGVFLAMHYTPHVDLAFNSVEHIMRDVEGGWLLRYMHANGASMFLIVVYLHLFRGLYHASYSSPREFVRCIGVVILLLMIVTAFIGYVPPWGQMSFWGATVITSLASAIPVVGDTIVTWLWGGFSVDNATLNRFFSLHHLLPFLLVGASLLHLAALHQYGSNNPLGVHSEMDKIASYPYFYVKDLVGWVAFAIFSSIFIFYAPNVLGHPDNYIPANPMPTPPHIVPEWYFLPIHAILRSIPDKAGGVAAIAPVFICLLALPFFKSMYVRSSSFRPIHQGIFWLLLADRLLLGWIGCQPVEAPFVTIGQISPFVFFLFFAITPILGRVGRGIPNFYTENENRSNDYQ
SIO_010081: AT66_p12
subclass of: SO_0000673
so part of: AT66_p12
location: 188450..189643
location: region:188450-189643:1
so has part: feature:188450-189643:1:exon

YP_008999566.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:188450-189643:1:exon

AT66_p11
type: Gene
subclass of: SO_0000704
RO_0002162: 4232
gene: ccmFc
locus tag: AT66_p11
so part of: sequence
location: complement(200761..201645)
location: region:200761-201645:-1
so has part: feature:200761-201645:-1:exon
subclass of: SO_0000010

18250965
type: Gene
SIO_000068: ncbigene

position:200761:-1
position: 200761
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:201645:-1
position: 201645
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:200761-201645:-1:exon

AT66_p11
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 4232
gene: ccmFc
locus tag: AT66_p11
codon start: 1
product: cytochrome c biogenesis FC
translation: MVQLHNFFFFITSMVVPRGTAAPVLLKWFVSRDVSTGAPSSNGTIIPILIPSVSLLVYLHSRKFIRSTDGAKSGVFIIASQPILLPDILGRSSSETRARKALFRFVPVLHFLLIEKKGDFSYLESFCGVLRLLFFRTFFSLPRDRSAKRERARRRKGQRLRPNGNEQGRNDKMRCPGHLHLERRVEVFGPVALPVPPSSGAACVGSAPPEIGLEALTLPTSRQLMAVGHDYYKKAPMKMNISHGGVCIFILGVLLSCDPAAYVRPVAHASYLFRAGGVNSDSIRVFNPAAEMLS
SIO_010081: AT66_p11
subclass of: SO_0000673
so part of: AT66_p11
location: complement(200761..201645)
location: region:200761-201645:-1
so has part: feature:200761-201645:-1:exon

YP_008999567.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:200761-201645:-1:exon

AT66_p10
type: Gene
subclass of: SO_0000704
RO_0002162: 4232
gene: orf873
locus tag: AT66_p10
so part of: sequence
location: complement(201790..202665)
location: region:201790-202665:-1
so has part: feature:201790-202665:-1:exon
subclass of: SO_0000010

18251001
type: Gene
SIO_000068: ncbigene

position:201790:-1
position: 201790
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:202665:-1
position: 202665
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:201790-202665:-1:exon

AT66_p10
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 4232
gene: orf873
locus tag: AT66_p10
codon start: 1
product: hypothetical protein
translation: MPQLDKFTYFFRFTILPIFTMLLGRFLGTGCPGISTLLTLFFLIVTLLLIYRMRVSKRKKSSFLFFVILILIYVLCTFSRSFFIFMLAGMPSAFVWKVSSESGDATSLPPLESSSSSESLATFRAEIAAENEAEIFTRIRNLETQDYYNLPPQNNPGEYEVLVREEFEQALDVPHYRTVLDREYFELTVLERKGLLQDRLFHLMLGEQKISRIMELSPYQNIRMEAYNFLEASVEPVSALEHPFQKDLMEGTLNFFIKELTQNGRNSEIYKNFYIHFTDELFRVKLGLPLP
SIO_010081: AT66_p10
subclass of: SO_0000673
so part of: AT66_p10
location: complement(201790..202665)
location: region:201790-202665:-1
so has part: feature:201790-202665:-1:exon

YP_008999568.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:201790-202665:-1:exon

AT66_p09
type: Gene
subclass of: SO_0000704
RO_0002162: 4232
gene: atp1
locus tag: AT66_p09
so part of: sequence
location: complement(202830..204362)
location: region:202830-204362:-1
so has part: feature:202830-204362:-1:exon
subclass of: SO_0000010

18250974
type: Gene
SIO_000068: ncbigene

position:202830:-1
position: 202830
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:204362:-1
position: 204362
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:202830-204362:-1:exon

AT66_p09
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 4232
gene: atp1
locus tag: AT66_p09
codon start: 1
product: ATPase subunit 1
translation: MEFSPRAAELTTLLESRISNFYTNFQVDEIGRVVSVGDGIARVYGLNEIQAGEMVEFASGVKGIALNLENENVGIVVFGSDTAIKEGDLVKRTGSIVDVPAGKAMLGRVVDALGVPIDGRGALSDHERRRVEVKAPGIIERKSVHEPMQTGLKAVDSLVPIGRGQRELIIGDRQTGKTAIAIDTILNQKQMNSRSTSESETLYCVYVAIGQKRSTVAQLVQILSEANAMEYSILVAATASDPAPLQFLAPYSGCAMGEYFRDNGMHALIIYDDLSKQAVAYRQMSLLLRRPPGREAFPGDVFYLHSRLLERAAKRSDQTGAGSLTALPVIETQAGDVSAYIPTNVIPITDGQICSETELFYRGIRPAINVGLSVSRVGSAAQLKTMKQVCGSSKLELAQYREVAALAQFGSDLDAATQALLNRGARLTEVPKQPQYAPLPIEKQILVIYAAVNGFCDRMPLDRISQYERAILKSIKTELLQSLLEKGGLTNERKMEPDTFLKECALPYTI
SIO_010081: AT66_p09
subclass of: SO_0000673
so part of: AT66_p09
location: complement(202830..204362)
location: region:202830-204362:-1
so has part: feature:202830-204362:-1:exon

YP_008999569.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:202830-204362:-1:exon

AT66_p08
type: Gene
subclass of: SO_0000704
RO_0002162: 4232
gene: ccmFn
locus tag: AT66_p08
so part of: sequence
location: complement(213361..215079)
location: region:213361-215079:-1
so has part: feature:213361-215079:-1:exon
subclass of: SO_0000010

18250964
type: Gene
SIO_000068: ncbigene

position:213361:-1
position: 213361
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:215079:-1
position: 215079
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:213361-215079:-1:exon

AT66_p08
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 4232
gene: ccmFn
locus tag: AT66_p08
codon start: 1
product: cytochrome c biogenesis FN
translation: MSTSIYELFHYSLFPGLFVAFTYNKKEPPVFGAAPAFWCILLSFLGLPFRHIPNNLSNDNELTASAPFFYQISGTWSNHEGSILSWCRILSFYGFLLCYRGRPQSHNVSKRGGHRESLFYSFVSNFVKNSILSLPSYEQKTGATTQLYTPFVLRTLVDSELRSRRHRTFDGPALFYAPFSQISFAPLGARRFRGSREGKRTHPLLHLARDDKERASSIDEQRIDGALGIALFFSPFLSASSDPFVRNFFVRTEPLAESNPVPQDPISAIHPPCIYAGDVASAMGFGLCRSKMMNGIVALHSPPMRKDDAEKNGRLFRSAGCVGSRIRSKLFTLKFKHVGAKGYPALLLRSNRSLLMLLRRRFAFSSLWTGALVDTGREQAKRVVRNGKKETTTSLFCWIAGANTVVSDQDQEPIRILILTCRWFLTVGILPGSWWAHHELGRGGWWFRDPVENASFMPRVLATARIHSVILPLLHSWTSFLNIVTLPCCVSGTFSIRSGLLAPVHNFATDDTRGIFLWWFFLLMTGISMIIFSQMKQQASVRRTYKKEMVVARSTLVHLRHSARAQPRPVML
SIO_010081: AT66_p08
subclass of: SO_0000673
so part of: AT66_p08
location: complement(213361..215079)
location: region:213361-215079:-1
so has part: feature:213361-215079:-1:exon

YP_008999570.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:213361-215079:-1:exon

AT66_p07
type: Gene
subclass of: SO_0000704
RO_0002162: 4232
gene: ccmFn
locus tag: AT66_p07
so part of: sequence
location: 228434..230110
location: region:228434-230110:1
so has part: feature:228434-230110:1:exon
subclass of: SO_0000010

18251002
type: Gene
SIO_000068: ncbigene

position:228434:1
position: 228434
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:230110:1
position: 230110
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:228434-230110:1:exon

AT66_p07
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 4232
gene: ccmFn
locus tag: AT66_p07
codon start: 1
product: cytochrome c biogenesis FN
translation: MEAPPIKQERSGSSHGGARIDSIYYYGKSVYQDVNLRSYFGSIRPPTRLTFGFRLGRCIILHFPKRTFIHFFLPRRPRRQKRREKSRPGKGKGQWWAFGKVGPIGCLHSSDGTEEERNEVRGRGAGKRVESIRLDDREKQNEIRIWPKKKQRYGYHDRSPSIKKNLSKSLRVSGAFKHPKYAGLVNDIALLNDDSFRKTKLFKFFFSKKSKKSPSDSPTSHPLKRTLPAVRPSLNYSVMQYLLKTKNQMHFDPVVVLNHFVEPGVVEPSTMGGAHAQGRSLDKRIRFAFFVESSTSEKKFLAEDKKLTHFIRWSNHPRFAGTTKTTISLFPFFGATFFFPRDGVGVYKKFFEYAREQLLRKFRKKCWNLMAKDKVMELIEKFIDLGGIGELIKGIEMMIEIILRNRRIPYGYNFYLNEVKKMRSLLSNRTKTNTLIESVKIKSVYQSASPIAQDISFQPRNKTRSFRSIFSQIVKDIRLVMKKGVEGIRICCSGRSEGAEIARTECENYGKTSSNVFNQKIDYAPAEVSTRYGISGVKVWISYSQKERGRAISETYEI
SIO_010081: AT66_p07
subclass of: SO_0000673
so part of: AT66_p07
location: 228434..230110
location: region:228434-230110:1
so has part: feature:228434-230110:1:exon

YP_008999571.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:228434-230110:1:exon

AT66_p06
type: Gene
subclass of: SO_0000704
RO_0002162: 4232
gene: rpl16
locus tag: AT66_p06
so part of: sequence
location: 230001..230516
location: region:230001-230516:1
so has part: feature:230001-230516:1:exon
subclass of: SO_0000010

18250980
type: Gene
SIO_000068: ncbigene

position:230001:1
position: 230001
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:230516:1
position: 230516
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:230001-230516:1:exon

AT66_p06
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 4232
gene: rpl16
locus tag: AT66_p06
codon start: 1
product: ribosomal protein L16
translation: MLLRKYLLVTESQVSKCGFHIVKKKGDVLYPKRTKSSKYRKGRCSRGCKPDGTRLGFGRYGTKSCRAGHLSYRAIEAARRARIGQFHRTMSGQFRINGKIWVRVLADLPITGKPTEVRMGRGKGNPTGWIARVSTGQIPFEMDDVSLSNARQAATLAAHKLCSSTKFVQWS
SIO_010081: AT66_p06
subclass of: SO_0000673
so part of: AT66_p06
location: 230001..230516
location: region:230001-230516:1
so has part: feature:230001-230516:1:exon

YP_008999572.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:230001-230516:1:exon

AT66_p05
type: Gene
subclass of: SO_0000704
RO_0002162: 4232
gene: matR
locus tag: AT66_p05
so part of: sequence
location: complement(249925..251892)
location: region:249925-251892:-1
so has part: feature:249925-251892:-1:exon
subclass of: SO_0000010

18250976
type: Gene
SIO_000068: ncbigene

position:249925:-1
position: 249925
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:251892:-1
position: 251892
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:249925-251892:-1:exon

AT66_p05
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 4232
gene: matR
locus tag: AT66_p05
codon start: 1
product: maturase
translation: MKEAIRMVLESIYDPEFPDTSHFRSGRGCHSALRRIKEEWGTSRWFLEFDIRKCFHTIDRHRLIPIFKEEIGDPKFFYSIQKVFSAGRLVGAEKGPYSVPHSVLLSALPDNIYLHKLDQEIGRIQQKYEIPIVQRIRSVLLRTGRIDDQEDSGEEASFNPPQDNRAIIVGRVKSIQRKAAFHSLVSSWHTPPASTPRLRGDQKRSFVFPPSSALAAFLNKPSSLLCAAFLIEAAGLTPKAEFYGRERCNNNWAMRDFFKYCKRKGLLIELGGEAILVIRSERGLARKLAPLKSHYLIRICYARYADDLLLGIVGAVELLIEIKKLLAHFLQSGLNLWVGSAGSTTIAARSTVEFLGTVIREVPPRTTPIQFLRELEKRLRVKQRIHITACHLRSAIHSKFRNLGNSIPIKELTKGMSGTGSLLDAVQLADTLGTAGVRSPQVSVLWGTVKHIRQGSRALSLLHSSGRSKVPSDVQQAVSRSGMSVRKLSLYTPVGRKAAGEGEGDWARSIRSEFPIQIEAPIKKILRRLRDRGLISRRRPWPIHVACLTNVSDGDIVNWSAGIAISPLSYYRCRDNLYQVRTIVDHQIRWSAIFTPAHKHKSSARNIIPKYSKDSNIVNKEGGKTLAEFPNSIELGKLGPGQDPNNKEHSITSLV
SIO_010081: AT66_p05
subclass of: SO_0000673
so part of: AT66_p05
location: complement(249925..251892)
location: region:249925-251892:-1
so has part: feature:249925-251892:-1:exon

YP_008999573.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:249925-251892:-1:exon

AT66_p04
type: Gene
subclass of: SO_0000704
RO_0002162: 4232
gene: nad3
locus tag: AT66_p04
so part of: sequence
location: 254008..254364
location: region:254008-254364:1
so has part: feature:254008-254364:1:exon
subclass of: SO_0000010

18250973
type: Gene
SIO_000068: ncbigene

position:254008:1
position: 254008
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:254364:1
position: 254364
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:254008-254364:1:exon

AT66_p04
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 4232
gene: nad3
locus tag: AT66_p04
codon start: 1
product: NADH dehydrogenase subunit 3
translation: MSEFAPICIYLVISPLVSLIPLGVPFPFASNSSTYPEKLSAYECGFDPFGDARSRFDIRFYLVSILFIIPDPEVTFSFPWAVPLNKIDPFGSWSMMAFLLILTIGSLYEWKRGASDRE
SIO_010081: AT66_p04
subclass of: SO_0000673
so part of: AT66_p04
location: 254008..254364
location: region:254008-254364:1
so has part: feature:254008-254364:1:exon

YP_008999574.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:254008-254364:1:exon

AT66_p03
type: Gene
subclass of: SO_0000704
RO_0002162: 4232
gene: rps12
locus tag: AT66_p03
so part of: sequence
location: 254416..254793
location: region:254416-254793:1
so has part: feature:254416-254793:1:exon
subclass of: SO_0000010

18250968
type: Gene
SIO_000068: ncbigene

position:254416:1
position: 254416
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:254793:1
position: 254793
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:254416-254793:1:exon

AT66_p03
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 4232
gene: rps12
locus tag: AT66_p03
codon start: 1
product: ribosomal protein S12
translation: MPTLNQLIRHGREEKRRTDRTRASDQCPQKQGVRPRVPTRTPKKPNSAPRKIAKVRLSNRHDIFAHIPGEGHNSQEHSIVLIRGGRVKDSPGVKSHCIRGVKDLLGIPDRRKGRSKYGAEKPKSR
SIO_010081: AT66_p03
subclass of: SO_0000673
so part of: AT66_p03
location: 254416..254793
location: region:254416-254793:1
so has part: feature:254416-254793:1:exon

YP_008999575.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:254416-254793:1:exon

AT66_p02
type: Gene
subclass of: SO_0000704
RO_0002162: 4232
gene: nad9
locus tag: AT66_p02
so part of: sequence
location: 260202..260774
location: region:260202-260774:1
so has part: feature:260202-260774:1:exon
subclass of: SO_0000010

18250978
type: Gene
SIO_000068: ncbigene

position:260202:1
position: 260202
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:260774:1
position: 260774
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:260202-260774:1:exon

AT66_p02
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 4232
gene: nad9
locus tag: AT66_p02
codon start: 1
product: NADH dehydrogenase subunit 9
translation: MDNQFIFKYSWETLPKKWVKKMERSEHGNSSDTNTDCPFQLLCFLQLHTYTRVQVSIDICGVDHPSRKRRFEVVYNLLSTRYNSRIRVQTSADEVTRISPVVSPFPSAGRWEREVWDMFGVSSINHPDLRRISTDYGFEGHPLRKDLPLSGYVEVRYDDPEKRVVSEPIEMTQEFRYFDSASPWEQRSDG
SIO_010081: AT66_p02
subclass of: SO_0000673
so part of: AT66_p02
location: 260202..260774
location: region:260202-260774:1
so has part: feature:260202-260774:1:exon

YP_008999576.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:260202-260774:1:exon

AT66_t14
type: Gene
subclass of: SO_0000704
RO_0002162: 4232
gene: trnW
locus tag: AT66_t14
so part of: sequence
location: 261753..261826
location: region:261753-261826:1
so has part: feature:261753-261826:1:exon
subclass of: SO_0000663

18250972
type: Gene
SIO_000068: ncbigene

position:261753:1
position: 261753
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:261826:1
position: 261826
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:261753-261826:1:exon

AT66_t14
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 4232
gene: trnW
locus tag: AT66_t14
product: tRNA-Trp
SIO_010081: AT66_t14
subclass of: SO_0000673
so part of: AT66_t14
location: 261753..261826
location: region:261753-261826:1
so has part: feature:261753-261826:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:261753-261826:1:exon

AT66_p01
type: Gene
subclass of: SO_0000704
RO_0002162: 4232
gene: atp6
locus tag: AT66_p01
so part of: sequence
location: 269075..269980
location: region:269075-269980:1
so has part: feature:269075-269980:1:exon
subclass of: SO_0000010

18250997
type: Gene
SIO_000068: ncbigene

position:269075:1
position: 269075
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:269980:1
position: 269980
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:269075-269980:1:exon

AT66_p01
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 4232
gene: atp6
locus tag: AT66_p01
codon start: 1
product: ATPase subunit 6
translation: MRVVKDYYVTIERTVTDNAIIFDYHHYHNNYYYYNLSAFAEMQTRTQAPSPLEQFSILPLIPMNIGNLYFSFTNSSLFMLLTLSLVLLLIHFVTKKGGGNLVPNAWQSLVELIYDFVLNLVNEQIGGLSGNVKQKFFPCILVTFTFLLFCNLQGMIPYSFTVTSHFLITLGLSFSIFIGITIVGFQRNGLHFLSFLLPAGVPLPLAPFLVLLELISYCFRALSLGIRLFANMMAGHSLVKILSGFAWTMLCMNDLLYFIGDLGPLFIVLALTGLELGVAILQAYVFTILICIYLNDAINLH
SIO_010081: AT66_p01
subclass of: SO_0000673
so part of: AT66_p01
location: 269075..269980
location: region:269075-269980:1
so has part: feature:269075-269980:1:exon

YP_008999577.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:269075-269980:1:exon

repeat_region
type: Repeat Region
subclass of: SO_0000657
RO_0002162: 4232
note: large repeat copy 2
so part of: sequence
location: 288012..300945
location: region:288012-300945:1
so has part: feature:288012-300945:1:region

position:288012:1
position: 288012
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:288012-300945:1:region

AT66_t15
type: Gene
subclass of: SO_0000704
RO_0002162: 4232
gene: trnK
locus tag: AT66_t15
so part of: sequence
location: complement(300817..300889)
location: region:300817-300889:-1
so has part: feature:300817-300889:-1:exon
subclass of: SO_0000663

18251004
type: Gene
SIO_000068: ncbigene

position:300817:-1
position: 300817
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:300889:-1
position: 300889
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:300817-300889:-1:exon

AT66_t15
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 4232
gene: trnK
locus tag: AT66_t15
product: tRNA-Lys
SIO_010081: AT66_t15
subclass of: SO_0000673
so part of: AT66_t15
location: complement(300817..300889)
location: region:300817-300889:-1
so has part: feature:300817-300889:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:300817-300889:-1:exon