Camelus ferus isolate YT-003-E chromosome 34, BCGSAC_Cfer_1.0, whole genome shotgun sequence.
type: Entry
definition: Camelus ferus isolate YT-003-E chromosome 34, BCGSAC_Cfer_1.0, whole genome shotgun sequence.
sequence version: NC_045729.1
sequence date: 2020-02-19
sequence: sequence
division: CON
label: NC_045729.1
type: RefSeq
SIO_000068: refseq
dblink: PRJNA605179
dblink: SAMN12102236
keyword: WGS
keyword: RefSeq
source: Camelus ferus (Wild Bactrian camel)
organism: Camelus ferus
taxonomy: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Tylopoda; Camelidae; Camelus.
comment: REFSEQ INFORMATION: The reference sequence is identical to\nCM020801.1.\nAssembly name: BCGSAC_Cfer_1.0\nThe genomic sequence for this RefSeq record is from the\nwhole-genome assembly released by The Bactrian Camels Genome\nSequencing and Analysis Consortium on 2020/01/08. The original\nwhole-genome shotgun project has the accession VSZR00000000.1.\n\n##Genome-Assembly-Data-START##\nAssembly Provider :: The Bactrian Camels Genome Sequencing and\n Analysis Consortium\nAssembly Method :: FALCON v. FEB-2018; LACHESIS v. MAR-2018\nAssembly Name :: BCGSAC_Cfer_1.0\nGenome Representation :: Full\nExpected Final Version :: Yes\nGenome Coverage :: 50.0x\nSequencing Technology :: PacBio Sequel; Hi-C\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI\nAnnotation Status :: Full annotation\nAnnotation Name :: Camelus ferus Annotation Release 102\nAnnotation Version :: 102\nAnnotation Pipeline :: NCBI eukaryotic genome annotation\n pipeline\nAnnotation Software Version :: 8.3\nAnnotation Method :: Best-placed RefSeq; Gnomon\nFeatures Annotated :: Gene; mRNA; CDS; ncRNA\n##Genome-Annotation-Data-END##

sequence
subclass of: SO_0000340
sequence length: 21481498
topology: linear
so has quality: SO_0000987
location: 1..21481498
location: region:1-21481498:1
RO_0002162: 419612

NC_045729
type: RefSeq
SIO_000068: refseq

PRJNA605179
type: BioProject
SIO_000068: bioproject

SAMN12102236
type: BioSample
SIO_000068: biosample

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:21481498:1
position: 21481498
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-21481498:1:source
so part of: sequence
organism: Camelus ferus
mol type: genomic DNA
isolate: YT-003-E
chromosome: 34
sex: male
tissue type: ear skin
country: Mongolia

419612
type: Taxonomy
SIO_000068: taxonomy

LOC116661286
type: Gene
subclass of: SO_0000704
RO_0002162: 419612
gene: LOC116661286
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(90735..114719)
location: region:90735-114719:-1
so has part: feature:90735-114719:-1:exon
subclass of: SO_0000011

116661286
type: Gene
SIO_000068: ncbigene

position:90735:-1
position: 90735
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:114719:-1
position: 114719
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:90735-114719:-1:exon

LOC116661286
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 419612
nc RNA class: lncRNA
gene: LOC116661286
product: uncharacterized LOC116661286
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XR_004317126.1
SIO_010081: LOC116661286
subclass of: SO_0000673
so part of: LOC116661286
location: complement(join(90735..90744,101464..101475,106448..106455,113973..114719))
location: region:90735-114719:-1
so has part: feature:113973-114719:-1:exon
so has part: feature:106448-106455:-1:exon
so has part: feature:101464-101475:-1:exon
so has part: feature:90735-90744:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:113973-114719:-1:exon

position:113973:-1
position: 113973
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:106448-106455:-1:exon

position:106448:-1
position: 106448
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:106455:-1
position: 106455
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:101464-101475:-1:exon

position:101464:-1
position: 101464
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:101475:-1
position: 101475
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:90735-90744:-1:exon

position:90744:-1
position: 90744
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC116661285
type: Gene
subclass of: SO_0000704
RO_0002162: 419612
gene: LOC116661285
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 98195..103747
location: region:98195-103747:1
so has part: feature:98195-103747:1:exon
subclass of: SO_0000011

116661285
type: Gene
SIO_000068: ncbigene

position:98195:1
position: 98195
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:103747:1
position: 103747
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:98195-103747:1:exon

LOC116661285
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 419612
nc RNA class: lncRNA
gene: LOC116661285
product: uncharacterized LOC116661285
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XR_004317125.1
SIO_010081: LOC116661285
subclass of: SO_0000673
so part of: LOC116661285
location: join(98195..99007,103204..103747)
location: region:98195-103747:1
so has part: feature:98195-99007:1:exon
so has part: feature:103204-103747:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:98195-99007:1:exon

position:99007:1
position: 99007
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:103204-103747:1:exon

position:103204:1
position: 103204
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC116661284
type: Gene
subclass of: SO_0000704
RO_0002162: 419612
gene: LOC116661284
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(123303..148456)
location: region:123303-148456:-1
so has part: feature:123303-148456:-1:exon
subclass of: SO_0000011

116661284
type: Gene
SIO_000068: ncbigene

position:123303:-1
position: 123303
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:148456:-1
position: 148456
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:123303-148456:-1:exon

LOC116661284
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 419612
nc RNA class: lncRNA
gene: LOC116661284
product: uncharacterized LOC116661284, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XR_004317124.1
SIO_010081: LOC116661284
subclass of: SO_0000673
so part of: LOC116661284
location: complement(join(123303..123429,128396..128510,131065..131352,147849..148456))
location: region:123303-148456:-1
so has part: feature:147849-148456:-1:exon
so has part: feature:131065-131352:-1:exon
so has part: feature:128396-128510:-1:exon
so has part: feature:123303-123429:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:147849-148456:-1:exon

position:147849:-1
position: 147849
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:131065-131352:-1:exon

position:131065:-1
position: 131065
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:131352:-1
position: 131352
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:128396-128510:-1:exon

position:128396:-1
position: 128396
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:128510:-1
position: 128510
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:123303-123429:-1:exon

position:123429:-1
position: 123429
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC116661284
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 419612
nc RNA class: lncRNA
gene: LOC116661284
product: uncharacterized LOC116661284, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XR_004317123.1
SIO_010081: LOC116661284
subclass of: SO_0000673
so part of: LOC116661284
location: complement(join(123303..123429,128396..128510,131065..131352,132100..132294,132389..132551))
location: region:123303-132551:-1
so has part: feature:132389-132551:-1:exon
so has part: feature:132100-132294:-1:exon
so has part: feature:131065-131352:-1:exon
so has part: feature:128396-128510:-1:exon
so has part: feature:123303-123429:-1:exon

position:132551:-1
position: 132551
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:132389-132551:-1:exon

position:132389:-1
position: 132389
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:132100-132294:-1:exon

position:132100:-1
position: 132100
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:132294:-1
position: 132294
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:131065-131352:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:128396-128510:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:123303-123429:-1:exon

LOC116661337
type: Gene
subclass of: SO_0000704
RO_0002162: 419612
gene: LOC116661337
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(166257..173791)
location: region:166257-173791:-1
so has part: feature:166257-173791:-1:exon
subclass of: SO_0000010

116661337
type: Gene
SIO_000068: ncbigene

position:166257:-1
position: 166257
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:173791:-1
position: 173791
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:166257-173791:-1:exon

LOC116661337
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 419612
gene: LOC116661337
product: GDP-fucose protein O-fucosyltransferase 2-like, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 14 samples with support for all annotated introns
transcript id: XM_032473233.1
SIO_010081: LOC116661337
subclass of: SO_0000673
so part of: LOC116661337
location: complement(join(166257..167756,168665..168722,171924..172156,173156..173217,173552..173791))
location: region:166257-173791:-1
so has part: feature:173552-173791:-1:exon
so has part: feature:173156-173217:-1:exon
so has part: feature:171924-172156:-1:exon
so has part: feature:168665-168722:-1:exon
so has part: feature:166257-167756:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:173552-173791:-1:exon

position:173552:-1
position: 173552
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:173156-173217:-1:exon

position:173156:-1
position: 173156
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:173217:-1
position: 173217
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:171924-172156:-1:exon

position:171924:-1
position: 171924
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:172156:-1
position: 172156
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:168665-168722:-1:exon

position:168665:-1
position: 168665
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:168722:-1
position: 168722
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:166257-167756:-1:exon

position:167756:-1
position: 167756
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC116661337
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 419612
gene: LOC116661337
product: GDP-fucose protein O-fucosyltransferase 2-like, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 31 samples with support for all annotated introns
transcript id: XM_032473232.1
SIO_010081: LOC116661337
subclass of: SO_0000673
so part of: LOC116661337
location: complement(join(166257..167756,168665..168722,171924..172156,173156..173217,173546..173791))
location: region:166257-173791:-1
so has part: feature:173546-173791:-1:exon
so has part: feature:173156-173217:-1:exon
so has part: feature:171924-172156:-1:exon
so has part: feature:168665-168722:-1:exon
so has part: feature:166257-167756:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:173546-173791:-1:exon

position:173546:-1
position: 173546
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:173156-173217:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:171924-172156:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:168665-168722:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:166257-167756:-1:exon

LOC116661337
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 419612
gene: LOC116661337
product: GDP-fucose protein O-fucosyltransferase 2-like, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 35 samples with support for all annotated introns
transcript id: XR_004317220.1
SIO_010081: LOC116661337
so part of: LOC116661337
location: complement(join(166257..167756,168665..168794,169622..169788,171924..172156,173552..173745))
location: region:166257-173745:-1
so has part: feature:173552-173745:-1:exon
so has part: feature:171924-172156:-1:exon
so has part: feature:169622-169788:-1:exon
so has part: feature:168665-168794:-1:exon
so has part: feature:166257-167756:-1:exon

position:173745:-1
position: 173745
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:173552-173745:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:171924-172156:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:169622-169788:-1:exon

position:169622:-1
position: 169622
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:169788:-1
position: 169788
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:168665-168794:-1:exon

position:168794:-1
position: 168794
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:166257-167756:-1:exon

LOC116661337
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 419612
gene: LOC116661337
product: GDP-fucose protein O-fucosyltransferase 2-like, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 40 samples with support for all annotated introns
transcript id: XR_004317219.1
SIO_010081: LOC116661337
so part of: LOC116661337
location: complement(join(166257..167756,168665..168794,169622..169788,171924..172156,173546..173721))
location: region:166257-173721:-1
so has part: feature:173546-173721:-1:exon
so has part: feature:171924-172156:-1:exon
so has part: feature:169622-169788:-1:exon
so has part: feature:168665-168794:-1:exon
so has part: feature:166257-167756:-1:exon

position:173721:-1
position: 173721
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:173546-173721:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:171924-172156:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:169622-169788:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:168665-168794:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:166257-167756:-1:exon

LOC116661337
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 419612
gene: LOC116661337
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: GDP-fucose protein O-fucosyltransferase 2-like isoform X2
translation: MAACSAGRLVLAWSVGGRHPVWGGVPQTGNFSSIQMLVPSVNLRKKTQGYLLCDFNPPEGFNLRRNVCIHIAFLLKTLLKMEEPVLVLFPWGHLYHWQSPDPWSDSFDLPSLNRNIPDIEYEQFIAGTLCS
SIO_010081: LOC116661337
subclass of: SO_0000673
so part of: LOC116661337
location: complement(join(168706..168722,171924..172156,173156..173217,173552..173635))
location: region:168706-173635:-1
so has part: feature:173552-173635:-1:exon
so has part: feature:173156-173217:-1:exon
so has part: feature:171924-172156:-1:exon
so has part: feature:168706-168722:-1:exon

XP_032329124.1
type: Protein
SIO_000068: ncbiprotein

position:168706:-1
position: 168706
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:173635:-1
position: 173635
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:173552-173635:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:173156-173217:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:171924-172156:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:168706-168722:-1:exon

LOC116661337
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 419612
gene: LOC116661337
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: GDP-fucose protein O-fucosyltransferase 2-like isoform X1
translation: MAACSAGRLVLAWSVGGRHPVWGGVPQTVNGNFSSIQMLVPSVNLRKKTQGYLLCDFNPPEGFNLRRNVCIHIAFLLKTLLKMEEPVLVLFPWGHLYHWQSPDPWSDSFDLPSLNRNIPDIEYEQFIAGTLCS
SIO_010081: LOC116661337
subclass of: SO_0000673
so part of: LOC116661337
location: complement(join(168706..168722,171924..172156,173156..173217,173546..173635))
location: region:168706-173635:-1
so has part: feature:173546-173635:-1:exon
so has part: feature:173156-173217:-1:exon
so has part: feature:171924-172156:-1:exon
so has part: feature:168706-168722:-1:exon

XP_032329123.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:173546-173635:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:173156-173217:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:171924-172156:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:168706-168722:-1:exon

LOC116661339
type: Gene
subclass of: SO_0000704
RO_0002162: 419612
gene: LOC116661339
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 173898..176137
location: region:173898-176137:1
so has part: feature:173898-176137:1:exon
subclass of: SO_0000011

116661339
type: Gene
SIO_000068: ncbigene

position:173898:1
position: 173898
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:176137:1
position: 176137
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:173898-176137:1:exon

LOC116661339
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 419612
nc RNA class: lncRNA
gene: LOC116661339
product: uncharacterized LOC116661339
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 27 samples with support for all annotated introns
transcript id: XR_004317221.1
SIO_010081: LOC116661339
subclass of: SO_0000673
so part of: LOC116661339
location: join(173898..174122,175549..175724,175845..176137)
location: region:173898-176137:1
so has part: feature:173898-174122:1:exon
so has part: feature:175549-175724:1:exon
so has part: feature:175845-176137:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:173898-174122:1:exon

position:174122:1
position: 174122
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:175549-175724:1:exon

position:175549:1
position: 175549
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:175724:1
position: 175724
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:175845-176137:1:exon

position:175845:1
position: 175845
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC116661338
type: Gene
subclass of: SO_0000704
RO_0002162: 419612
gene: LOC116661338
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(183067..>184632)
location: region:183067-184632:-1
so has part: feature:183067-184632:-1:exon
subclass of: SO_0000010

116661338
type: Gene
SIO_000068: ncbigene

position:183067:-1
position: 183067
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:184632:-1
position: 184632
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:183067-184632:-1:exon

LOC116661338
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 419612
gene: LOC116661338
product: glutamate receptor ionotropic, NMDA 2C-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_032473234.1
SIO_010081: LOC116661338
subclass of: SO_0000673
so part of: LOC116661338
location: complement(183067..>184632)
location: region:183067-184632:-1
so has part: feature:183067-184632:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:183067-184632:-1:exon

LOC116661338
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 419612
gene: LOC116661338
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: glutamate receptor ionotropic, NMDA 2C-like
translation: PCLPWSLCRTLWWTWWGALGPAVLLTSLLDAWAGLGPGQGEQAVTVAVVFGSSGPLQAQAHTRLIPQSFLDLLLEIQPLTVGVNTTNPSSLLTQICGLLGAARVQGIVSEGNVGTEAVAQILDFISSQPLVPILSISGGSAVVLTPKVPVQNHVPSSLEPGARLGLGEWG
SIO_010081: LOC116661338
subclass of: SO_0000673
so part of: LOC116661338
location: complement(184120..>184632)
location: region:184120-184632:-1
so has part: feature:184120-184632:-1:exon

XP_032329125.1
type: Protein
SIO_000068: ncbiprotein

position:184120:-1
position: 184120
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:184120-184632:-1:exon

LOC102519805
type: Gene
subclass of: SO_0000704
RO_0002162: 419612
gene: LOC102519805
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 221639..230336
location: region:221639-230336:1
so has part: feature:221639-230336:1:exon
subclass of: SO_0000010

102519805
type: Gene
SIO_000068: ncbigene

position:221639:1
position: 221639
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:230336:1
position: 230336
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:221639-230336:1:exon

LOC102519805
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 419612
gene: LOC102519805
product: uncharacterized LOC102519805
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 82% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_032472890.1
SIO_010081: LOC102519805
subclass of: SO_0000673
so part of: LOC102519805
location: join(221639..221727,223254..223416,223925..224135,226964..230336)
location: region:221639-230336:1
so has part: feature:221639-221727:1:exon
so has part: feature:223254-223416:1:exon
so has part: feature:223925-224135:1:exon
so has part: feature:226964-230336:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:221639-221727:1:exon

position:221727:1
position: 221727
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:223254-223416:1:exon

position:223254:1
position: 223254
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:223416:1
position: 223416
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:223925-224135:1:exon

position:223925:1
position: 223925
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:224135:1
position: 224135
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:226964-230336:1:exon

position:226964:1
position: 226964
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC102519805
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 419612
gene: LOC102519805
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC102519805
translation: MVTAGRGEQQRYEPTQVSCTFEALVDWKLCSVLLNTNVCVFWIILTQWKVLVGNWILDGGHAPEAAYDLAHDLCCQSKLPLTWMAFLTWLKLFWEELSWWQMGKRSMESVPYTQRQGQQGLRRCPQPDAHKARLVPTCVRCRGPGLLPVCVLNYNVASGYSIGQYSSRAHLYTNKDGPIIGKKIHDAGSVLKRLSAQGLACGRRPARGRRLPGFMAAARAAGPGRQGARRRRPALGARGPPGCPACERSRGRPSSHLAGPSPDRRGRRAAAAGWVTAGRNIVENAKQKPVKPARYFSELEKSILLALVEKCKYVLERKESDARTPALKQRTWQALAHESSSQPSVSLRDFKRLKKCWEDIKARTKKIMAHERREKVKRSVSRLLSTHVLGKETVASMRPGSSMLPAEPAEEEHGYRARARANAEESFAVSNRRAVHDEKELIHFPGCEGTSQPEPSCSAVRITATKNYRSKKTGAKPPRKVL
SIO_010081: LOC102519805
subclass of: SO_0000673
so part of: LOC102519805
location: join(221639..221727,223254..223416,223925..224135,226964..227949)
location: region:221639-227949:1
so has part: feature:221639-221727:1:exon
so has part: feature:223254-223416:1:exon
so has part: feature:223925-224135:1:exon
so has part: feature:226964-227949:1:exon

XP_032328781.1
type: Protein
SIO_000068: ncbiprotein

position:227949:1
position: 227949
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:221639-221727:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:223254-223416:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:223925-224135:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:226964-227949:1:exon

LOC102517631
type: Gene
subclass of: SO_0000704
RO_0002162: 419612
gene: LOC102517631
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: 230050..231079
location: region:230050-231079:1
so has part: feature:230050-231079:1:exon

102517631
type: Gene
SIO_000068: ncbigene

position:230050:1
position: 230050
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:231079:1
position: 231079
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:230050-231079:1:exon

LOC102517631
type: Exon
subclass of: SO_0000147
RO_0002162: 419612
gene: LOC102517631
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC102517631
subclass of: SO_0000673
so part of: LOC102517631
location: 230050..231079
location: region:230050-231079:1
so has part: feature:230050-231079:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:230050-231079:1:exon

ALG10
type: Gene
subclass of: SO_0000704
RO_0002162: 419612
gene: ALG10
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(249542..255807)
location: region:249542-255807:-1
so has part: feature:249542-255807:-1:exon
subclass of: SO_0000010

102517383
type: Gene
SIO_000068: ncbigene

position:249542:-1
position: 249542
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:255807:-1
position: 255807
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:249542-255807:-1:exon

ALG10
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 419612
gene: ALG10
product: ALG10 alpha-1,2-glucosyltransferase, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 mRNAs, 14 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 39 samples with support for all annotated introns
transcript id: XM_006184255.3
SIO_010081: ALG10
subclass of: SO_0000673
so part of: ALG10
location: complement(join(249542..252339,254027..254224,255499..255807))
location: region:249542-255807:-1
so has part: feature:255499-255807:-1:exon
so has part: feature:254027-254224:-1:exon
so has part: feature:249542-252339:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:255499-255807:-1:exon

position:255499:-1
position: 255499
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:254027-254224:-1:exon

position:254027:-1
position: 254027
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:254224:-1
position: 254224
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:249542-252339:-1:exon

position:252339:-1
position: 252339
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

ALG10
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 419612
gene: ALG10
product: ALG10 alpha-1,2-glucosyltransferase, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 21 samples with support for all annotated introns
transcript id: XM_014558852.2
SIO_010081: ALG10
subclass of: SO_0000673
so part of: ALG10
location: complement(join(249542..252339,254027..254224,255525..255654))
location: region:249542-255654:-1
so has part: feature:255525-255654:-1:exon
so has part: feature:254027-254224:-1:exon
so has part: feature:249542-252339:-1:exon

position:255654:-1
position: 255654
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:255525-255654:-1:exon

position:255525:-1
position: 255525
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:254027-254224:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:249542-252339:-1:exon

ALG10
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 419612
gene: ALG10
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: dol-P-Glc:Glc(2)Man(9)GlcNAc(2)-PP-Dol alpha-1,2-glucosyltransferase isoform X1
translation: MAQLEGYYFSAALSCTFLVSCLLFSAFSRALREPYMDEIFHLPQAQRYCEGHFSLSQWDPMITTLPGLYLLSVGVVKPASWIFGWSEHVVCSIGMLRFVNLLFSVGNFYLLYLLLRKVQPRHKATSSVQRILSTVTLAIFPTLYFFNFLYYTEAGSMFFTLFAYLMCLYGNHKTSALLGFCGFMFRQTNIIWAVFCAGNVIAQKLTEAWKTELQKKKEERLPPVRGPFSEFRKILRFLLAYSTSFKNLSALLLLTWPYGLLALLFCAFVAVNGGVVIGDRSSHEACLHFPQLFYFCSFTLFFSFPHLLSLSKIRAFLCLVWKRKLQFLAVTLVSIFLVWRFTYAHKYLLADNRHYTFYVWKRVFQRHEIVRYLLVPLYIFAGWSIADSLKSKPIFWNLMFFVCLFAVTVPQKLLEFRYFILPYVIYRLNIPLPPTSRLVCELGCYAVINFLTFYIFLHKTFQWPDSPDTQRFMW
SIO_010081: ALG10
subclass of: SO_0000673
so part of: ALG10
location: complement(join(251284..252339,254027..254224,255499..255669))
location: region:251284-255669:-1
so has part: feature:255499-255669:-1:exon
so has part: feature:254027-254224:-1:exon
so has part: feature:251284-252339:-1:exon

XP_006184317.1
type: Protein
SIO_000068: ncbiprotein

position:251284:-1
position: 251284
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:255669:-1
position: 255669
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:255499-255669:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:254027-254224:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:251284-252339:-1:exon

ALG10
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 419612
gene: ALG10
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: dol-P-Glc:Glc(2)Man(9)GlcNAc(2)-PP-Dol alpha-1,2-glucosyltransferase isoform X2
translation: MITTLPGLYLLSVGVVKPASWIFGWSEHVVCSIGMLRFVNLLFSVGNFYLLYLLLRKVQPRHKATSSVQRILSTVTLAIFPTLYFFNFLYYTEAGSMFFTLFAYLMCLYGNHKTSALLGFCGFMFRQTNIIWAVFCAGNVIAQKLTEAWKTELQKKKEERLPPVRGPFSEFRKILRFLLAYSTSFKNLSALLLLTWPYGLLALLFCAFVAVNGGVVIGDRSSHEACLHFPQLFYFCSFTLFFSFPHLLSLSKIRAFLCLVWKRKLQFLAVTLVSIFLVWRFTYAHKYLLADNRHYTFYVWKRVFQRHEIVRYLLVPLYIFAGWSIADSLKSKPIFWNLMFFVCLFAVTVPQKLLEFRYFILPYVIYRLNIPLPPTSRLVCELGCYAVINFLTFYIFLHKTFQWPDSPDTQRFMW
SIO_010081: ALG10
subclass of: SO_0000673
so part of: ALG10
location: complement(join(251284..252339,254027..254215))
location: region:251284-254215:-1
so has part: feature:254027-254215:-1:exon
so has part: feature:251284-252339:-1:exon

XP_014414338.1
type: Protein
SIO_000068: ncbiprotein

position:254215:-1
position: 254215
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:254027-254215:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:251284-252339:-1:exon

LOC116661294
type: Gene
subclass of: SO_0000704
RO_0002162: 419612
gene: LOC116661294
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(304467..323260)
location: region:304467-323260:-1
so has part: feature:304467-323260:-1:exon
subclass of: SO_0000011

116661294
type: Gene
SIO_000068: ncbigene

position:304467:-1
position: 304467
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:323260:-1
position: 323260
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:304467-323260:-1:exon

LOC116661294
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 419612
nc RNA class: lncRNA
gene: LOC116661294
product: uncharacterized LOC116661294
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
transcript id: XR_004317145.1
SIO_010081: LOC116661294
subclass of: SO_0000673
so part of: LOC116661294
location: complement(join(304467..304670,314505..314512,323249..323260))
location: region:304467-323260:-1
so has part: feature:323249-323260:-1:exon
so has part: feature:314505-314512:-1:exon
so has part: feature:304467-304670:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:323249-323260:-1:exon

position:323249:-1
position: 323249
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:314505-314512:-1:exon

position:314505:-1
position: 314505
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:314512:-1
position: 314512
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:304467-304670:-1:exon

position:304670:-1
position: 304670
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

SYT10
type: Gene
subclass of: SO_0000704
RO_0002162: 419612
gene: SYT10
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 429248..488222
location: region:429248-488222:1
so has part: feature:429248-488222:1:exon
subclass of: SO_0000010

102517127
type: Gene
SIO_000068: ncbigene

position:429248:1
position: 429248
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:488222:1
position: 488222
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:429248-488222:1:exon

SYT10
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 419612
gene: SYT10
product: synaptotagmin 10
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 17 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_006184254.3
SIO_010081: SYT10
subclass of: SO_0000673
so part of: SYT10
location: join(429248..429968,445882..446242,460775..461342,478810..478930,481984..482155,484501..484630,487299..488222)
location: region:429248-488222:1
so has part: feature:429248-429968:1:exon
so has part: feature:445882-446242:1:exon
so has part: feature:460775-461342:1:exon
so has part: feature:478810-478930:1:exon
so has part: feature:481984-482155:1:exon
so has part: feature:484501-484630:1:exon
so has part: feature:487299-488222:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:429248-429968:1:exon

position:429968:1
position: 429968
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:445882-446242:1:exon

position:445882:1
position: 445882
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:446242:1
position: 446242
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:460775-461342:1:exon

position:460775:1
position: 460775
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:461342:1
position: 461342
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:478810-478930:1:exon

position:478810:1
position: 478810
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:478930:1
position: 478930
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:481984-482155:1:exon

position:481984:1
position: 481984
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:482155:1
position: 482155
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:484501-484630:1:exon

position:484501:1
position: 484501
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:484630:1
position: 484630
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:487299-488222:1:exon

position:487299:1
position: 487299
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

SYT10
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 419612
gene: SYT10
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: synaptotagmin-10
translation: MSFHKEDGVSSLCQKALHIVTELCFAGQVEWEKCSSIFPPDRGSQGGGSTDISVSLLAVVVSFCGLALLVVSLFVFWKLCWPCWKSKPLASNVSTLPPSVSSAPTEVFQETEEKKEVKENGKPALKAIEPAIKISHTSPDIPAEVQTALKEHLIKHARVQRQTTEPTSSSRHNSFRRHLPRQMQVSSVDFGMGTEPVLQKGETTTSIGRIKPELYKQKSVDSEDDRKEDIKICGKLNFTLQYDYENELLVVKIVKALDLPAKDFAGTSDPYVKMYLLPDRKKKFQTRVHRKTLNPLFDETFQFPVAYDQLSNRKLHFSIYDFDRFSRHDMIGEAILDNLFEASDLSREATMWKDIHCATTESIDLGEIMFSLCYLPTAGRMTLTVIKCRNLKAMDITGSSDPYVKVSLMCEGRRLKKRKTTTKKNTLNPVYNEAIVFDIPPENVDQVSLSIAVMDYDRVGHNEVIGVCRAGLDAEGLGRDHWNEMLAYHRKPITHWHPLLELPGRATSFDSQGSCSSPKPPSTP
SIO_010081: SYT10
subclass of: SO_0000673
so part of: SYT10
location: join(429818..429968,445882..446242,460775..461342,478810..478930,481984..482155,484501..484630,487299..487370)
location: region:429818-487370:1
so has part: feature:429818-429968:1:exon
so has part: feature:445882-446242:1:exon
so has part: feature:460775-461342:1:exon
so has part: feature:478810-478930:1:exon
so has part: feature:481984-482155:1:exon
so has part: feature:484501-484630:1:exon
so has part: feature:487299-487370:1:exon

XP_006184316.1
type: Protein
SIO_000068: ncbiprotein

position:429818:1
position: 429818
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:487370:1
position: 487370
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:429818-429968:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:445882-446242:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:460775-461342:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:478810-478930:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:481984-482155:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:484501-484630:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:487299-487370:1:exon

LOC102519569
type: Gene
subclass of: SO_0000704
RO_0002162: 419612
gene: LOC102519569
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(730248..731231)
location: region:730248-731231:-1
so has part: feature:730248-731231:-1:exon
subclass of: SO_0000010

102519569
type: Gene
SIO_000068: ncbigene

position:730248:-1
position: 730248
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:731231:-1
position: 731231
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:730248-731231:-1:exon

LOC102519569
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 419612
gene: LOC102519569
product: 40S ribosomal protein SA-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 mRNAs, 31 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_032473503.1
SIO_010081: LOC102519569
subclass of: SO_0000673
so part of: LOC102519569
location: complement(730248..731231)
location: region:730248-731231:-1
so has part: feature:730248-731231:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:730248-731231:-1:exon

LOC102519569
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 419612
gene: LOC102519569
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: 40S ribosomal protein SA-like
translation: MSGALDVLKFLAAGTHLGGTNLDFQMEQYIYKRKSDGIYIINLKRTWETLLLAARAIVAIENPADVSVISSRNTGQRAVLKFAAATGAMPIAGRFTPGTFTNQIQAAFREPRLLVVTDPRADHQPLTEASYVNLPTIALCNTDSPLRYVDIAIPCNNKGAHSVGLMWWMLAREVLRMRGTVSREHPWEVMPDLYFYRDPEEIEKEEQAAAEKAVTKEEFQGEWTAPAPEFTATQPEVADWSEGMQVPSVPIQQFPTEDWSAQPATEDWSAAPTAQATEWVATTTEWS
SIO_010081: LOC102519569
subclass of: SO_0000673
so part of: LOC102519569
location: complement(730295..731158)
location: region:730295-731158:-1
so has part: feature:730295-731158:-1:exon

XP_032329394.1
type: Protein
SIO_000068: ncbiprotein

position:730295:-1
position: 730295
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:731158:-1
position: 731158
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:730295-731158:-1:exon

LOC116661377
type: Gene
subclass of: SO_0000704
RO_0002162: 419612
gene: LOC116661377
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(734868..822397)
location: region:734868-822397:-1
so has part: feature:734868-822397:-1:exon
subclass of: SO_0000011

116661377
type: Gene
SIO_000068: ncbigene

position:734868:-1
position: 734868
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:822397:-1
position: 822397
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:734868-822397:-1:exon

LOC116661377
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 419612
nc RNA class: lncRNA
gene: LOC116661377
product: uncharacterized LOC116661377, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XR_004317266.1
SIO_010081: LOC116661377
subclass of: SO_0000673
so part of: LOC116661377
location: complement(join(734868..736193,747402..747576,748909..749132,750581..750731,821081..821250,822123..822397))
location: region:734868-822397:-1
so has part: feature:822123-822397:-1:exon
so has part: feature:821081-821250:-1:exon
so has part: feature:750581-750731:-1:exon
so has part: feature:748909-749132:-1:exon
so has part: feature:747402-747576:-1:exon
so has part: feature:734868-736193:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:822123-822397:-1:exon

position:822123:-1
position: 822123
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:821081-821250:-1:exon

position:821081:-1
position: 821081
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:821250:-1
position: 821250
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:750581-750731:-1:exon

position:750581:-1
position: 750581
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:750731:-1
position: 750731
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:748909-749132:-1:exon

position:748909:-1
position: 748909
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:749132:-1
position: 749132
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:747402-747576:-1:exon

position:747402:-1
position: 747402
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:747576:-1
position: 747576
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:734868-736193:-1:exon

position:736193:-1
position: 736193
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

TRNAD-GUC
type: Gene
subclass of: SO_0000704
RO_0002162: 419612
gene: TRNAD-GUC
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
so part of: sequence
location: 773497..773569
location: region:773497-773569:1
so has part: feature:773497-773569:1:exon
subclass of: SO_0000663

116661395
type: Gene
SIO_000068: ncbigene

position:773497:1
position: 773497
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:773569:1
position: 773569
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:773497-773569:1:exon

TRNAD-GUC
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 419612
gene: TRNAD-GUC
product: tRNA-Asp
inference: COORDINATES: profile:tRNAscan-SE:1.23
note: transfer RNA aspartic acid (anticodon GUC); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:773530..773532,aa:Asp,seq:gtc)
SIO_010081: TRNAD-GUC
subclass of: SO_0000673
so part of: TRNAD-GUC
location: 773497..773569
location: region:773497-773569:1
so has part: feature:773497-773569:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:773497-773569:1:exon

LOC116661378
type: Gene
subclass of: SO_0000704
RO_0002162: 419612
gene: LOC116661378
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(779306..794638)
location: region:779306-794638:-1
so has part: feature:779306-794638:-1:exon
subclass of: SO_0000011

116661378
type: Gene
SIO_000068: ncbigene

position:779306:-1
position: 779306
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:794638:-1
position: 794638
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:779306-794638:-1:exon

LOC116661378
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 419612
nc RNA class: lncRNA
gene: LOC116661378
product: uncharacterized LOC116661378
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XR_004317267.1
SIO_010081: LOC116661378
subclass of: SO_0000673
so part of: LOC116661378
location: complement(join(779306..779933,788447..788696,794429..794638))
location: region:779306-794638:-1
so has part: feature:794429-794638:-1:exon
so has part: feature:788447-788696:-1:exon
so has part: feature:779306-779933:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:794429-794638:-1:exon

position:794429:-1
position: 794429
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:788447-788696:-1:exon

position:788447:-1
position: 788447
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:788696:-1
position: 788696
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:779306-779933:-1:exon

position:779933:-1
position: 779933
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC116661377
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 419612
nc RNA class: lncRNA
gene: LOC116661377
product: uncharacterized LOC116661377, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XR_004317265.1
SIO_010081: LOC116661377
subclass of: SO_0000673
so part of: LOC116661377
location: complement(join(818777..819672,821081..821250,822123..822397))
location: region:818777-822397:-1
so has part: feature:822123-822397:-1:exon
so has part: feature:821081-821250:-1:exon
so has part: feature:818777-819672:-1:exon

position:818777:-1
position: 818777
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:822123-822397:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:821081-821250:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:818777-819672:-1:exon

position:819672:-1
position: 819672
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

PKP2
type: Gene
subclass of: SO_0000704
RO_0002162: 419612
gene: PKP2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 822491..896932
location: region:822491-896932:1
so has part: feature:822491-896932:1:exon
subclass of: SO_0000010

102519320
type: Gene
SIO_000068: ncbigene

position:822491:1
position: 822491
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:896932:1
position: 896932
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:822491-896932:1:exon

PKP2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 419612
gene: PKP2
product: plakophilin 2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 26 samples with support for all annotated introns
transcript id: XM_032473502.1
SIO_010081: PKP2
subclass of: SO_0000673
so part of: PKP2
location: join(822491..822799,836137..836249,837010..837689,845483..845618,857621..857828,865961..866138,880800..880917,881750..881914,882783..882956,888791..888944,893165..893354,895823..895910,896042..896932)
location: region:822491-896932:1
so has part: feature:822491-822799:1:exon
so has part: feature:836137-836249:1:exon
so has part: feature:837010-837689:1:exon
so has part: feature:845483-845618:1:exon
so has part: feature:857621-857828:1:exon
so has part: feature:865961-866138:1:exon
so has part: feature:880800-880917:1:exon
so has part: feature:881750-881914:1:exon
so has part: feature:882783-882956:1:exon
so has part: feature:888791-888944:1:exon
so has part: feature:893165-893354:1:exon
so has part: feature:895823-895910:1:exon
so has part: feature:896042-896932:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:822491-822799:1:exon

position:822799:1
position: 822799
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:836137-836249:1:exon

position:836137:1
position: 836137
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:836249:1
position: 836249
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:837010-837689:1:exon

position:837010:1
position: 837010
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:837689:1
position: 837689
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:845483-845618:1:exon

position:845483:1
position: 845483
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:845618:1
position: 845618
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:857621-857828:1:exon

position:857621:1
position: 857621
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:857828:1
position: 857828
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:865961-866138:1:exon

position:865961:1
position: 865961
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:866138:1
position: 866138
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:880800-880917:1:exon

position:880800:1
position: 880800
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:880917:1
position: 880917
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:881750-881914:1:exon

position:881750:1
position: 881750
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:881914:1
position: 881914
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:882783-882956:1:exon

position:882783:1
position: 882783
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:882956:1
position: 882956
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:888791-888944:1:exon

position:888791:1
position: 888791
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:888944:1
position: 888944
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:893165-893354:1:exon

position:893165:1
position: 893165
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:893354:1
position: 893354
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:895823-895910:1:exon

position:895823:1
position: 895823
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:895910:1
position: 895910
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:896042-896932:1:exon

position:896042:1
position: 896042
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

PKP2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 419612
gene: PKP2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: plakophilin-2
translation: MAAPGSPAECGYIRTVLGQQILGQLDSSSLALPSEAKLKLAGSSGRSGQAAKSLRIQEQVQQTLARKGRSFVGNGNLHRATSVPEYVHNLHLVENDFAAGRFPFTKTYDVLKTGTTATYEARWGRGTSQYSSQKSVEERSLRQPLRRLEISPDSSPERAHYPPGEPQYSQRSQAGHTLRAQEGRRSAPALPPRYARSEIVGFSHSAAASRQRHYDTYQRRYQDAVFDGAPVAPVLLTYPRPGTSHSLGNLLEKENYLAPGPAAGQVRPPAPAHPGGVQGRAARSSWHQSSFHSTRALREAGVAAESGGRRMHMTVGQVAAGGSGNVLAERGAFADAQLGNLDTEMTLERAVSMLEANHTPLSRISAAATFIQHECFQKSEARRRVNQLHGIPKLLQLLKVQNEDVQRAVCGALRNLVFEDNDNKLEVAELGGVRQLLQVLKQTRDLETKKQITGLLWNLSSNDRLKNLMITEALLTLTENVVIPFSGWPEGDYPKANGLLDFDIFYNVTGCLRNMSSAGPEGRKVMRRCDGLIDSLVHYVRGTIADYQPDDKATENCVCILHNLSYQLEAELPEKYSQSIYIQNRTIQADSNKSVGCFGSRSRKVKEQYQDMPMPEEKSNPKGVEWLWHSIVIRMYLSLIAKSGRNYTQEASLGALQNLTAGSGPMPASVAQTVVQKENGLHHTRKMLHVGDPSVKKTAVSLLRNLSRNLSLQNEIAKETLPDLVSIIPDTVPSTDLLIETTASACYTLNNIIQNSYQNARDLLNTGGLQKIMTISAGDISASNKASKAASVLLYSLWSHAELHSAYKKAQFKKTDFVNSRTAKAFHSLKD
SIO_010081: PKP2
subclass of: SO_0000673
so part of: PKP2
location: join(822577..822799,836137..836249,837010..837689,845483..845618,857621..857828,865961..866138,880800..880917,881750..881914,882783..882956,888791..888944,893165..893354,895823..895910,896042..896110)
location: region:822577-896110:1
so has part: feature:822577-822799:1:exon
so has part: feature:836137-836249:1:exon
so has part: feature:837010-837689:1:exon
so has part: feature:845483-845618:1:exon
so has part: feature:857621-857828:1:exon
so has part: feature:865961-866138:1:exon
so has part: feature:880800-880917:1:exon
so has part: feature:881750-881914:1:exon
so has part: feature:882783-882956:1:exon
so has part: feature:888791-888944:1:exon
so has part: feature:893165-893354:1:exon
so has part: feature:895823-895910:1:exon
so has part: feature:896042-896110:1:exon

XP_032329393.1
type: Protein
SIO_000068: ncbiprotein

position:822577:1
position: 822577
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:896110:1
position: 896110
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:822577-822799:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:836137-836249:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:837010-837689:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:845483-845618:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:857621-857828:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:865961-866138:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:880800-880917:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:881750-881914:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:882783-882956:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:888791-888944:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:893165-893354:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:895823-895910:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:896042-896110:1:exon

YARS2
type: Gene
subclass of: SO_0000704
RO_0002162: 419612
gene: YARS2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 926798..938475
location: region:926798-938475:1
so has part: feature:926798-938475:1:exon
subclass of: SO_0000010

102519083
type: Gene
SIO_000068: ncbigene

position:926798:1
position: 926798
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:938475:1
position: 938475
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:926798-938475:1:exon

YARS2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 419612
gene: YARS2
product: tyrosyl-tRNA synthetase 2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 4 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 40 samples with support for all annotated introns
transcript id: XM_032473361.1
SIO_010081: YARS2
subclass of: SO_0000673
so part of: YARS2
location: join(926798..927660,928490..928657,934041..934196,934509..934679,935320..938475)
location: region:926798-938475:1
so has part: feature:926798-927660:1:exon
so has part: feature:928490-928657:1:exon
so has part: feature:934041-934196:1:exon
so has part: feature:934509-934679:1:exon
so has part: feature:935320-938475:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:926798-927660:1:exon

position:927660:1
position: 927660
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:928490-928657:1:exon

position:928490:1
position: 928490
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:928657:1
position: 928657
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:934041-934196:1:exon

position:934041:1
position: 934041
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:934196:1
position: 934196
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:934509-934679:1:exon

position:934509:1
position: 934509
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:934679:1
position: 934679
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:935320-938475:1:exon

position:935320:1
position: 935320
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

YARS2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 419612
gene: YARS2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tyrosine--tRNA ligase, mitochondrial
translation: MAAPMLRCISRGRRFGTPGRSGVLPRGLRESHSGAQGLLAVQKARGLFKEFFPERGTKTELPELFDHRTAGTVPQTVYCGFDPTADSLHVGHLLALLGLFHFQRAGHNVIALVGGATARLGDPSGRSKEREALAAERVRSNARALRRGLQALAANHQQLFADGRAWGTFTVLDNADWYQKQPLVDFLAAVGGHFRMGTLLSRLSVQTRLKSPEGMSLAEFLYQVLQAYDFYYLFQRYGCRVQLGGSDQLGNIMSGYEFIHKLTGEDVFGISVPLITSTTGAKLGKSAGNAVWLNRDKTSPFELYQFFVRQQDDLVERYLKLFTFLPLPEIDHIMQLHVKEAEKRGPQKRLAAEVTKLVHGQEGLDSAKRCTQALYHSSIDALEVMSDQELKELFKEASFSELVLDPGTSVLDTCRKANAIPDGPRGYRMITEGGVSINHRQVTNPESVLVVGQHILKNGLSLLKIGKRNVYIIKWLQL
SIO_010081: YARS2
subclass of: SO_0000673
so part of: YARS2
location: join(926879..927660,928490..928657,934041..934196,934509..934679,935320..935479)
location: region:926879-935479:1
so has part: feature:926879-927660:1:exon
so has part: feature:928490-928657:1:exon
so has part: feature:934041-934196:1:exon
so has part: feature:934509-934679:1:exon
so has part: feature:935320-935479:1:exon

XP_032329252.1
type: Protein
SIO_000068: ncbiprotein

position:926879:1
position: 926879
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:935479:1
position: 935479
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:926879-927660:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:928490-928657:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:934041-934196:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:934509-934679:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:935320-935479:1:exon

DNM1L
type: Gene
subclass of: SO_0000704
RO_0002162: 419612
gene: DNM1L
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(938213..983587)
location: region:938213-983587:-1
so has part: feature:938213-983587:-1:exon
subclass of: SO_0000010

102516708
type: Gene
SIO_000068: ncbigene

position:938213:-1
position: 938213
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:983587:-1
position: 983587
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:938213-983587:-1:exon

DNM1L
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 419612
gene: DNM1L
product: dynamin 1 like
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments, including 13 samples with support for all annotated introns
transcript id: XM_032473359.1
SIO_010081: DNM1L
subclass of: SO_0000673
so part of: DNM1L
location: complement(join(938213..938464,938743..938902,939062..939171,939329..939505,941063..941095,941412..941489,942179..942235,944528..944620,946001..946090,946327..946482,946719..946839,948901..949107,950007..950138,951721..951841,953781..953943,959375..959461,960651..960722,961140..961186,962665..962703,965986..966132,983380..983587))
location: region:938213-983587:-1
so has part: feature:983380-983587:-1:exon
so has part: feature:965986-966132:-1:exon
so has part: feature:962665-962703:-1:exon
so has part: feature:961140-961186:-1:exon
so has part: feature:960651-960722:-1:exon
so has part: feature:959375-959461:-1:exon
so has part: feature:953781-953943:-1:exon
so has part: feature:951721-951841:-1:exon
so has part: feature:950007-950138:-1:exon
so has part: feature:948901-949107:-1:exon
so has part: feature:946719-946839:-1:exon
so has part: feature:946327-946482:-1:exon
so has part: feature:946001-946090:-1:exon
so has part: feature:944528-944620:-1:exon
so has part: feature:942179-942235:-1:exon
so has part: feature:941412-941489:-1:exon
so has part: feature:941063-941095:-1:exon
so has part: feature:939329-939505:-1:exon
so has part: feature:939062-939171:-1:exon
so has part: feature:938743-938902:-1:exon
so has part: feature:938213-938464:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:983380-983587:-1:exon

position:983380:-1
position: 983380
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:965986-966132:-1:exon

position:965986:-1
position: 965986
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:966132:-1
position: 966132
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:962665-962703:-1:exon

position:962665:-1
position: 962665
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:962703:-1
position: 962703
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:961140-961186:-1:exon

position:961140:-1
position: 961140
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:961186:-1
position: 961186
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:960651-960722:-1:exon

position:960651:-1
position: 960651
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:960722:-1
position: 960722
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:959375-959461:-1:exon

position:959375:-1
position: 959375
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:959461:-1
position: 959461
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:953781-953943:-1:exon

position:953781:-1
position: 953781
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:953943:-1
position: 953943
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:951721-951841:-1:exon

position:951721:-1
position: 951721
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:951841:-1
position: 951841
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:950007-950138:-1:exon

position:950007:-1
position: 950007
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:950138:-1
position: 950138
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:948901-949107:-1:exon

position:948901:-1
position: 948901
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:949107:-1
position: 949107
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:946719-946839:-1:exon

position:946719:-1
position: 946719
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:946839:-1
position: 946839
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:946327-946482:-1:exon

position:946327:-1
position: 946327
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:946482:-1
position: 946482
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:946001-946090:-1:exon

position:946001:-1
position: 946001
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:946090:-1
position: 946090
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:944528-944620:-1:exon

position:944528:-1
position: 944528
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:944620:-1
position: 944620
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:942179-942235:-1:exon

position:942179:-1
position: 942179
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:942235:-1
position: 942235
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:941412-941489:-1:exon

position:941412:-1
position: 941412
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:941489:-1
position: 941489
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:941063-941095:-1:exon

position:941063:-1
position: 941063
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:941095:-1
position: 941095
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:939329-939505:-1:exon

position:939329:-1
position: 939329
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:939505:-1
position: 939505
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:939062-939171:-1:exon

position:939062:-1
position: 939062
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:939171:-1
position: 939171
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:938743-938902:-1:exon

position:938743:-1
position: 938743
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:938902:-1
position: 938902
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:938213-938464:-1:exon

position:938464:-1
position: 938464
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

DNM1L
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 419612
gene: DNM1L
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: dynamin-1-like protein
translation: MEALIPVINKLQDVFNTVGADIIQLPQIVVVGTQSSGKSSVLESLVGRDLLPRGTGIVTRRPLILQLVHVSPEDKRKTXGEENDPATWKNSRHLSKGVEAEEWGKFLHTKNKLYTDFDEIRQEIENETERISGNNKGVSPEPIHLKIFSPNVVNLTLVDLPGMTKVPVGDQPKDIELQIRELILRFISNPNSIILAVTAANTDMATSEALKISREVDPDGRRTLAVITKLDLMDAGTDAMDVLMGRVIPVKLGIIGVVNRSQLDINNKKSVTDSIRDEYAFLQKKYPSLANRNGTKYLARTLNRLLMHHIRDCLPELKTRINVLAAQYQSLLNSYGEPVDDKSATLLQLITKFATEYCNTIEGTAKYIETSELCGGARICYIFHETFGRTLESVDPLGGLNTIDILTAIRNATGPRPALFVPEVSFELLVKRQIKRLEEPSLRCVELVHEEMQRIIQHCSNYSTQELLRFPKLHDAIVEVVTCLLRKRLPVTNEMVHNLVAIELAYINTKHPDFADACGLMNNNIEEQRRNRLARELPSAVSRDKSSKVPSALAPASQEPSPAASAEADGKLIQDSRRETKNAASGGGGVGDGVQEPATGNWRGMLKTSKAEELLAEEKSKPIPIMPASPQKGHAVNLLDVPVPVARKLSAREQRDCEVIERLIKSYFLIVRKNIQDSVPKAVMHFLVNHVKDTLQSELVGQLYKSSLLDDLLTESEDMAQRRKEAADMLKALQGASQIIAEIRETHLW
SIO_010081: DNM1L
subclass of: SO_0000673
so part of: DNM1L
location: complement(join(938408..938464,938743..938902,939062..939171,939329..939505,941063..941095,941412..941489,942179..942235,944528..944620,946001..946090,946327..946482,946719..946839,948901..949107,950007..950138,951721..951841,953781..953943,959375..959461,960651..960722,961140..961186,962665..962703,965986..966132,983380..983481))
location: region:938408-983481:-1
so has part: feature:983380-983481:-1:exon
so has part: feature:965986-966132:-1:exon
so has part: feature:962665-962703:-1:exon
so has part: feature:961140-961186:-1:exon
so has part: feature:960651-960722:-1:exon
so has part: feature:959375-959461:-1:exon
so has part: feature:953781-953943:-1:exon
so has part: feature:951721-951841:-1:exon
so has part: feature:950007-950138:-1:exon
so has part: feature:948901-949107:-1:exon
so has part: feature:946719-946839:-1:exon
so has part: feature:946327-946482:-1:exon
so has part: feature:946001-946090:-1:exon
so has part: feature:944528-944620:-1:exon
so has part: feature:942179-942235:-1:exon
so has part: feature:941412-941489:-1:exon
so has part: feature:941063-941095:-1:exon
so has part: feature:939329-939505:-1:exon
so has part: feature:939062-939171:-1:exon
so has part: feature:938743-938902:-1:exon
so has part: feature:938408-938464:-1:exon

XP_032329250.1
type: Protein
SIO_000068: ncbiprotein

position:938408:-1
position: 938408
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:983481:-1
position: 983481
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:983380-983481:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:965986-966132:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:962665-962703:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:961140-961186:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:960651-960722:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:959375-959461:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:953781-953943:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:951721-951841:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:950007-950138:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:948901-949107:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:946719-946839:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:946327-946482:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:946001-946090:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:944528-944620:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:942179-942235:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:941412-941489:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:941063-941095:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:939329-939505:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:939062-939171:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:938743-938902:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:938408-938464:-1:exon

FGD4
type: Gene
subclass of: SO_0000704
RO_0002162: 419612
gene: FGD4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1011901..1180708)
location: region:1011901-1180708:-1
so has part: feature:1011901-1180708:-1:exon
subclass of: SO_0000010

102516455
type: Gene
SIO_000068: ncbigene

position:1011901:-1
position: 1011901
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1180708:-1
position: 1180708
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1011901-1180708:-1:exon

FGD4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 419612
gene: FGD4
product: FYVE, RhoGEF and PH domain containing 4, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_032472990.1
SIO_010081: FGD4
subclass of: SO_0000673
so part of: FGD4
location: complement(join(1011901..1017432,1018482..1018622,1020781..1020921,1023891..1024016,1024346..1024432,1024642..1024672,1028073..1028245,1034002..1034148,1034477..1034535,1036882..1037020,1042258..1042414,1042850..1042995,1045014..1045103,1061279..1061777,1065889..1066072,1074081..1074233,1170432..1170560,1179873..1180708))
location: region:1011901-1180708:-1
so has part: feature:1179873-1180708:-1:exon
so has part: feature:1170432-1170560:-1:exon
so has part: feature:1074081-1074233:-1:exon
so has part: feature:1065889-1066072:-1:exon
so has part: feature:1061279-1061777:-1:exon
so has part: feature:1045014-1045103:-1:exon
so has part: feature:1042850-1042995:-1:exon
so has part: feature:1042258-1042414:-1:exon
so has part: feature:1036882-1037020:-1:exon
so has part: feature:1034477-1034535:-1:exon
so has part: feature:1034002-1034148:-1:exon
so has part: feature:1028073-1028245:-1:exon
so has part: feature:1024642-1024672:-1:exon
so has part: feature:1024346-1024432:-1:exon
so has part: feature:1023891-1024016:-1:exon
so has part: feature:1020781-1020921:-1:exon
so has part: feature:1018482-1018622:-1:exon
so has part: feature:1011901-1017432:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1179873-1180708:-1:exon

position:1179873:-1
position: 1179873
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1170432-1170560:-1:exon

position:1170432:-1
position: 1170432
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1170560:-1
position: 1170560
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1074081-1074233:-1:exon

position:1074081:-1
position: 1074081
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1074233:-1
position: 1074233
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1065889-1066072:-1:exon

position:1065889:-1
position: 1065889
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1066072:-1
position: 1066072
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FGD4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 419612
gene: FGD4
product: FYVE, RhoGEF and PH domain containing 4, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 19 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 25 samples with support for all annotated introns
transcript id: XM_032472991.1
SIO_010081: FGD4
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FGD4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 419612
gene: FGD4
product: FYVE, RhoGEF and PH domain containing 4, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 18 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 15 samples with support for all annotated introns
transcript id: XM_032472989.1
SIO_010081: FGD4
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FGD4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 419612
gene: FGD4
product: FYVE, RhoGEF and PH domain containing 4, transcript variant X7
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 15 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_032472994.1
SIO_010081: FGD4
subclass of: SO_0000673
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location: region:1011901-1133999:-1
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FGD4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 419612
gene: FGD4
product: FYVE, RhoGEF and PH domain containing 4, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 mRNAs, 18 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 12 samples with support for all annotated introns
transcript id: XM_032472992.1
SIO_010081: FGD4
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FGD4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 419612
gene: FGD4
product: FYVE, RhoGEF and PH domain containing 4, transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 15 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
transcript id: XM_032472993.1
SIO_010081: FGD4
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FGD4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 419612
gene: FGD4
product: FYVE, RhoGEF and PH domain containing 4, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 mRNAs, 18 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 12 samples with support for all annotated introns
transcript id: XM_006184251.3
SIO_010081: FGD4
subclass of: SO_0000673
so part of: FGD4
location: complement(join(1011901..1017432,1018482..1018622,1020781..1020921,1023891..1024016,1024340..1024432,1024642..1024672,1028073..1028245,1034002..1034148,1034477..1034535,1036882..1037020,1042258..1042414,1042850..1042995,1045014..1045103,1061279..1061777,1065889..1066072,1074081..1074233,1091674..1092078))
location: region:1011901-1092078:-1
so has part: feature:1091674-1092078:-1:exon
so has part: feature:1074081-1074233:-1:exon
so has part: feature:1065889-1066072:-1:exon
so has part: feature:1061279-1061777:-1:exon
so has part: feature:1045014-1045103:-1:exon
so has part: feature:1042850-1042995:-1:exon
so has part: feature:1042258-1042414:-1:exon
so has part: feature:1036882-1037020:-1:exon
so has part: feature:1034477-1034535:-1:exon
so has part: feature:1034002-1034148:-1:exon
so has part: feature:1028073-1028245:-1:exon
so has part: feature:1024642-1024672:-1:exon
so has part: feature:1024340-1024432:-1:exon
so has part: feature:1023891-1024016:-1:exon
so has part: feature:1020781-1020921:-1:exon
so has part: feature:1018482-1018622:-1:exon
so has part: feature:1011901-1017432:-1:exon

position:1092078:-1
position: 1092078
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1091674-1092078:-1:exon

position:1091674:-1
position: 1091674
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1074081-1074233:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1065889-1066072:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1061279-1061777:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1045014-1045103:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1042850-1042995:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1042258-1042414:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1036882-1037020:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1034477-1034535:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1034002-1034148:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1028073-1028245:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1024642-1024672:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1024340-1024432:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1023891-1024016:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1020781-1020921:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1018482-1018622:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1011901-1017432:-1:exon

FGD4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 419612
gene: FGD4
product: FYVE, RhoGEF and PH domain containing 4, transcript variant X8
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 10 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_032472995.1
SIO_010081: FGD4
subclass of: SO_0000673
so part of: FGD4
location: complement(join(1011901..1017432,1018482..1018622,1020781..1020921,1023891..1024016,1024340..1024432,1024642..1024672,1028073..1028245,1034002..1034148,1034477..1034535,1036882..1037020,1042258..1042414,1042850..1042995,1045014..1045103,1061279..1061777,1063498..1064652))
location: region:1011901-1064652:-1
so has part: feature:1063498-1064652:-1:exon
so has part: feature:1061279-1061777:-1:exon
so has part: feature:1045014-1045103:-1:exon
so has part: feature:1042850-1042995:-1:exon
so has part: feature:1042258-1042414:-1:exon
so has part: feature:1036882-1037020:-1:exon
so has part: feature:1034477-1034535:-1:exon
so has part: feature:1034002-1034148:-1:exon
so has part: feature:1028073-1028245:-1:exon
so has part: feature:1024642-1024672:-1:exon
so has part: feature:1024340-1024432:-1:exon
so has part: feature:1023891-1024016:-1:exon
so has part: feature:1020781-1020921:-1:exon
so has part: feature:1018482-1018622:-1:exon
so has part: feature:1011901-1017432:-1:exon

position:1064652:-1
position: 1064652
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1063498-1064652:-1:exon

position:1063498:-1
position: 1063498
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1061279-1061777:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1045014-1045103:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1042850-1042995:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1042258-1042414:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1036882-1037020:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1034477-1034535:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1034002-1034148:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1028073-1028245:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1024642-1024672:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1024340-1024432:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1023891-1024016:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1020781-1020921:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1018482-1018622:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1011901-1017432:-1:exon

FGD4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 419612
gene: FGD4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: FYVE, RhoGEF and PH domain-containing protein 4 isoform X3
translation: MQATPPGVPPPLRSPPGARLQPDEGGRGRAAASERGRMSGEGDYNFRRVAIRRKSNPSYLPPGTPRPWSRPPSHLGWAEKAAFRSQAPAGALGCSICPKITRIPPSLKSSTATLVDQNVSAEEAQGINGKTPAKHAAASPKPQVPPKPFHLQNSPSSNIHQTPRHKALSSAKPRMEEVKPASASCVSKEKPSKVSDLISRFEGGSPLSNYSDLKKDPAVNLNVPRTPGRHGLTTTPQQKLLSQRSPRKQGHNPDQAQGVQTRVANGIIAAQNQMECEEDKAAALSAETPIQTSEPSPDTSLVNGEREETTTGPASPTANHCDGNADDRTPGVGPALPLGEGRADAETKVQERENRESPQELDQLDQHHEMKETDEQKLHKIANELLLTERAYVSRLDLLDQVFYCKLLEEANRGSFPAEMVNKIFSNISSINAFHSKFLLPELEKRMQEWETTPRIGDILQKLAPFLKMYGEYVKGFDHAMELVKNMTERIPQFKSVVEDIQKQRICGNLTLQHHMLEPVQRIPRYEMLLKDYLRKLPPDSPDWNDAKKSLEIISTAASHSNSAIRKMENLKKLLEIYEMLGEEEDIVNPSNELIKEGQILKLAARNTSAQERYLFLFNNMLLYCVPRFSLVGSKFTVRTRVGIDGMKIVETHNEEYPHTFQVSGKERTLELQASSEQDKEEWIKALQETIDAFHQRHETFRNAIAKDNDIHLEVSTAELGKRAPRWIRDNEVTMCMKCKEPFNALTRRRHHCRACGHVVCWKCSDYKAQLEYDGGKLSKVCKDCYQIISGFTDSEEKKRKGILEIESAEVSGNSVVCSFLQYMEKSKPWQKAWCVIPKQDPLVLYMYGAPQDVRAQATIPLLGYVVDDMPRSADLPHSFKLTQSKSVHSFAADSEELKQKWLKIILLAVTGETPDGPSKQPDALDEHPESKRQSEC
SIO_010081: FGD4
subclass of: SO_0000673
so part of: FGD4
location: complement(join(1017175..1017432,1018482..1018622,1020781..1020921,1023891..1024016,1024340..1024432,1024642..1024672,1028073..1028245,1034002..1034148,1034477..1034535,1036882..1037020,1042258..1042414,1042850..1042995,1045014..1045103,1061279..1061777,1065889..1066072,1074081..1074233,1179873..1180149))
location: region:1017175-1180149:-1
so has part: feature:1179873-1180149:-1:exon
so has part: feature:1074081-1074233:-1:exon
so has part: feature:1065889-1066072:-1:exon
so has part: feature:1061279-1061777:-1:exon
so has part: feature:1045014-1045103:-1:exon
so has part: feature:1042850-1042995:-1:exon
so has part: feature:1042258-1042414:-1:exon
so has part: feature:1036882-1037020:-1:exon
so has part: feature:1034477-1034535:-1:exon
so has part: feature:1034002-1034148:-1:exon
so has part: feature:1028073-1028245:-1:exon
so has part: feature:1024642-1024672:-1:exon
so has part: feature:1024340-1024432:-1:exon
so has part: feature:1023891-1024016:-1:exon
so has part: feature:1020781-1020921:-1:exon
so has part: feature:1018482-1018622:-1:exon
so has part: feature:1017175-1017432:-1:exon

XP_032328882.1
type: Protein
SIO_000068: ncbiprotein

position:1017175:-1
position: 1017175
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1180149:-1
position: 1180149
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1179873-1180149:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1074081-1074233:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1065889-1066072:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1061279-1061777:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1045014-1045103:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1042850-1042995:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1042258-1042414:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1036882-1037020:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1034477-1034535:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1034002-1034148:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1028073-1028245:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1024642-1024672:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1024340-1024432:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1023891-1024016:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1020781-1020921:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1018482-1018622:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1017175-1017432:-1:exon

FGD4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 419612
gene: FGD4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: FYVE, RhoGEF and PH domain-containing protein 4 isoform X2
translation: MQATPPGVPPPLRSPPGARLQPDEGGRGRAAASERGRMSGEGDYNFRRVAIRRKSNPSYLPPGTPRPWSRPPSHLGWAEKAAFRSQAPAGALDPCILHDKFCIFKIPPKLGSFSPAASISVFPMDQAVMLGPRNQGCSICPKITRIPPSLKSSTATLVDQNVSAEEAQGINGKTPAKHAAASPKPQVPPKPFHLQNSPSSNIHQTPRHKALSSAKPRMEEVKPASASCVSKEKPSKVSDLISRFEGGSPLSNYSDLKKDPAVNLNVPRTPGRHGLTTTPQQKLLSQRSPRKQGHNPDQAQGVQTRVANGIIAAQNQMECEEDKAAALSAETPIQTSEPSPDTSLVNGEREETTTGPASPTANHCDGNADDRTPGVGPALPLGEGRADAETKVQERENRESPQELDQLDQHHEMKETDEQKLHKIANELLLTERAYVSRLDLLDQVFYCKLLEEANRGSFPAEMVNKIFSNISSINAFHSKFLLPELEKRMQEWETTPRIGDILQKLAPFLKMYGEYVKGFDHAMELVKNMTERIPQFKSVVEDIQKQRICGNLTLQHHMLEPVQRIPRYEMLLKDYLRKLPPDSPDWNDAKKSLEIISTAASHSNSAIRKMENLKKLLEIYEMLGEEEDIVNPSNELIKEGQILKLAARNTSAQERYLFLFNNMLLYCVPRFSLVGSKFTVRTRVGIDGMKIVETHNEEYPHTFQVSGKERTLELQASSEQDKEEWIKALQETIDAFHQRHETFRNAIAKDNDIHLETAELGKRAPRWIRDNEVTMCMKCKEPFNALTRRRHHCRACGHVVCWKCSDYKAQLEYDGGKLSKVCKDCYQIISGFTDSEEKKRKGILEIESAEVSGNSVVCSFLQYMEKSKPWQKAWCVIPKQDPLVLYMYGAPQDVRAQATIPLLGYVVDDMPRSADLPHSFKLTQSKSVHSFAADSEELKQKWLKIILLAVTGETPDGPSKQPDALDEHPESKRQSEC
SIO_010081: FGD4
subclass of: SO_0000673
so part of: FGD4
location: complement(join(1017175..1017432,1018482..1018622,1020781..1020921,1023891..1024016,1024346..1024432,1024642..1024672,1028073..1028245,1034002..1034148,1034477..1034535,1036882..1037020,1042258..1042414,1042850..1042995,1045014..1045103,1061279..1061777,1065889..1066072,1074081..1074233,1170432..1170560,1179873..1180149))
location: region:1017175-1180149:-1
so has part: feature:1179873-1180149:-1:exon
so has part: feature:1170432-1170560:-1:exon
so has part: feature:1074081-1074233:-1:exon
so has part: feature:1065889-1066072:-1:exon
so has part: feature:1061279-1061777:-1:exon
so has part: feature:1045014-1045103:-1:exon
so has part: feature:1042850-1042995:-1:exon
so has part: feature:1042258-1042414:-1:exon
so has part: feature:1036882-1037020:-1:exon
so has part: feature:1034477-1034535:-1:exon
so has part: feature:1034002-1034148:-1:exon
so has part: feature:1028073-1028245:-1:exon
so has part: feature:1024642-1024672:-1:exon
so has part: feature:1024346-1024432:-1:exon
so has part: feature:1023891-1024016:-1:exon
so has part: feature:1020781-1020921:-1:exon
so has part: feature:1018482-1018622:-1:exon
so has part: feature:1017175-1017432:-1:exon

XP_032328881.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1179873-1180149:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1170432-1170560:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1074081-1074233:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1065889-1066072:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1061279-1061777:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1045014-1045103:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1042850-1042995:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1042258-1042414:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1036882-1037020:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1034477-1034535:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1034002-1034148:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1028073-1028245:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1024642-1024672:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1024346-1024432:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1023891-1024016:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1020781-1020921:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1018482-1018622:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1017175-1017432:-1:exon

FGD4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 419612
gene: FGD4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: FYVE, RhoGEF and PH domain-containing protein 4 isoform X1
translation: MQATPPGVPPPLRSPPGARLQPDEGGRGRAAASERGRMSGEGDYNFRRVAIRRKSNPSYLPPGTPRPWSRPPSHLGWAEKAAFRSQAPAGALDPCILHDKFCIFKIPPKLGSFSPAASISVFPMDQAVMLGPRNQGCSICPKITRIPPSLKSSTATLVDQNVSAEEAQGINGKTPAKHAAASPKPQVPPKPFHLQNSPSSNIHQTPRHKALSSAKPRMEEVKPASASCVSKEKPSKVSDLISRFEGGSPLSNYSDLKKDPAVNLNVPRTPGRHGLTTTPQQKLLSQRSPRKQGHNPDQAQGVQTRVANGIIAAQNQMECEEDKAAALSAETPIQTSEPSPDTSLVNGEREETTTGPASPTANHCDGNADDRTPGVGPALPLGEGRADAETKVQERENRESPQELDQLDQHHEMKETDEQKLHKIANELLLTERAYVSRLDLLDQVFYCKLLEEANRGSFPAEMVNKIFSNISSINAFHSKFLLPELEKRMQEWETTPRIGDILQKLAPFLKMYGEYVKGFDHAMELVKNMTERIPQFKSVVEDIQKQRICGNLTLQHHMLEPVQRIPRYEMLLKDYLRKLPPDSPDWNDAKKSLEIISTAASHSNSAIRKMENLKKLLEIYEMLGEEEDIVNPSNELIKEGQILKLAARNTSAQERYLFLFNNMLLYCVPRFSLVGSKFTVRTRVGIDGMKIVETHNEEYPHTFQVSGKERTLELQASSEQDKEEWIKALQETIDAFHQRHETFRNAIAKDNDIHLEVSTAELGKRAPRWIRDNEVTMCMKCKEPFNALTRRRHHCRACGHVVCWKCSDYKAQLEYDGGKLSKVCKDCYQIISGFTDSEEKKRKGILEIESAEVSGNSVVCSFLQYMEKSKPWQKAWCVIPKQDPLVLYMYGAPQDVRAQATIPLLGYVVDDMPRSADLPHSFKLTQSKSVHSFAADSEELKQKWLKIILLAVTGETPDGPSKQPDALDEHPESKRQSEC
SIO_010081: FGD4
subclass of: SO_0000673
so part of: FGD4
location: complement(join(1017175..1017432,1018482..1018622,1020781..1020921,1023891..1024016,1024340..1024432,1024642..1024672,1028073..1028245,1034002..1034148,1034477..1034535,1036882..1037020,1042258..1042414,1042850..1042995,1045014..1045103,1061279..1061777,1065889..1066072,1074081..1074233,1170432..1170560,1179873..1180149))
location: region:1017175-1180149:-1
so has part: feature:1179873-1180149:-1:exon
so has part: feature:1170432-1170560:-1:exon
so has part: feature:1074081-1074233:-1:exon
so has part: feature:1065889-1066072:-1:exon
so has part: feature:1061279-1061777:-1:exon
so has part: feature:1045014-1045103:-1:exon
so has part: feature:1042850-1042995:-1:exon
so has part: feature:1042258-1042414:-1:exon
so has part: feature:1036882-1037020:-1:exon
so has part: feature:1034477-1034535:-1:exon
so has part: feature:1034002-1034148:-1:exon
so has part: feature:1028073-1028245:-1:exon
so has part: feature:1024642-1024672:-1:exon
so has part: feature:1024340-1024432:-1:exon
so has part: feature:1023891-1024016:-1:exon
so has part: feature:1020781-1020921:-1:exon
so has part: feature:1018482-1018622:-1:exon
so has part: feature:1017175-1017432:-1:exon

XP_032328880.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1179873-1180149:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1170432-1170560:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1074081-1074233:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1065889-1066072:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1061279-1061777:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1045014-1045103:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1042850-1042995:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1042258-1042414:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1036882-1037020:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1034477-1034535:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1034002-1034148:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1028073-1028245:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1024642-1024672:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1024340-1024432:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1023891-1024016:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1020781-1020921:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1018482-1018622:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1017175-1017432:-1:exon

FGD4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 419612
gene: FGD4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: FYVE, RhoGEF and PH domain-containing protein 4 isoform X5
translation: MGGCCSICPKITRIPPSLKSSTATLVDQNVSAEEAQGINGKTPAKHAAASPKPQVPPKPFHLQNSPSSNIHQTPRHKALSSAKPRMEEVKPASASCVSKEKPSKVSDLISRFEGGSPLSNYSDLKKDPAVNLNVPRTPGRHGLTTTPQQKLLSQRSPRKQGHNPDQAQGVQTRVANGIIAAQNQMECEEDKAAALSAETPIQTSEPSPDTSLVNGEREETTTGPASPTANHCDGNADDRTPGVGPALPLGEGRADAETKVQERENRESPQELDQLDQHHEMKETDEQKLHKIANELLLTERAYVSRLDLLDQVFYCKLLEEANRGSFPAEMVNKIFSNISSINAFHSKFLLPELEKRMQEWETTPRIGDILQKLAPFLKMYGEYVKGFDHAMELVKNMTERIPQFKSVVEDIQKQRICGNLTLQHHMLEPVQRIPRYEMLLKDYLRKLPPDSPDWNDAKKSLEIISTAASHSNSAIRKMENLKKLLEIYEMLGEEEDIVNPSNELIKEGQILKLAARNTSAQERYLFLFNNMLLYCVPRFSLVGSKFTVRTRVGIDGMKIVETHNEEYPHTFQVSGKERTLELQASSEQDKEEWIKALQETIDAFHQRHETFRNAIAKDNDIHLEVSTAELGKRAPRWIRDNEVTMCMKCKEPFNALTRRRHHCRACGHVVCWKCSDYKAQLEYDGGKLSKVCKDCYQIISGFTDSEEKKRKGILEIESAEVSGNSVVCSFLQYMEKSKPWQKAWCVIPKQDPLVLYMYGAPQDVRAQATIPLLGYVVDDMPRSADLPHSFKLTQSKSVHSFAADSEELKQKWLKIILLAVTGETPDGPSKQPDALDEHPESKRQSEC
SIO_010081: FGD4
subclass of: SO_0000673
so part of: FGD4
location: complement(join(1017175..1017432,1018482..1018622,1020781..1020921,1023891..1024016,1024340..1024432,1024642..1024672,1028073..1028245,1034002..1034148,1034477..1034535,1036882..1037020,1042258..1042414,1042850..1042995,1045014..1045103,1061279..1061777,1065889..1066072,1074081..1074233,1124647..1124656))
location: region:1017175-1124656:-1
so has part: feature:1124647-1124656:-1:exon
so has part: feature:1074081-1074233:-1:exon
so has part: feature:1065889-1066072:-1:exon
so has part: feature:1061279-1061777:-1:exon
so has part: feature:1045014-1045103:-1:exon
so has part: feature:1042850-1042995:-1:exon
so has part: feature:1042258-1042414:-1:exon
so has part: feature:1036882-1037020:-1:exon
so has part: feature:1034477-1034535:-1:exon
so has part: feature:1034002-1034148:-1:exon
so has part: feature:1028073-1028245:-1:exon
so has part: feature:1024642-1024672:-1:exon
so has part: feature:1024340-1024432:-1:exon
so has part: feature:1023891-1024016:-1:exon
so has part: feature:1020781-1020921:-1:exon
so has part: feature:1018482-1018622:-1:exon
so has part: feature:1017175-1017432:-1:exon

XP_032328883.1
type: Protein
SIO_000068: ncbiprotein

position:1124656:-1
position: 1124656
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1124647-1124656:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1074081-1074233:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1065889-1066072:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1061279-1061777:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1045014-1045103:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1042850-1042995:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1042258-1042414:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1036882-1037020:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1034477-1034535:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1034002-1034148:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1028073-1028245:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1024642-1024672:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1024340-1024432:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1023891-1024016:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1020781-1020921:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1018482-1018622:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1017175-1017432:-1:exon

FGD4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 419612
gene: FGD4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: FYVE, RhoGEF and PH domain-containing protein 4 isoform X4
translation: MSTDQGCSICPKITRIPPSLKSSTATLVDQNVSAEEAQGINGKTPAKHAAASPKPQVPPKPFHLQNSPSSNIHQTPRHKALSSAKPRMEEVKPASASCVSKEKPSKVSDLISRFEGGSPLSNYSDLKKDPAVNLNVPRTPGRHGLTTTPQQKLLSQRSPRKQGHNPDQAQGVQTRVANGIIAAQNQMECEEDKAAALSAETPIQTSEPSPDTSLVNGEREETTTGPASPTANHCDGNADDRTPGVGPALPLGEGRADAETKVQERENRESPQELDQLDQHHEMKETDEQKLHKIANELLLTERAYVSRLDLLDQVFYCKLLEEANRGSFPAEMVNKIFSNISSINAFHSKFLLPELEKRMQEWETTPRIGDILQKLAPFLKMYGEYVKGFDHAMELVKNMTERIPQFKSVVEDIQKQRICGNLTLQHHMLEPVQRIPRYEMLLKDYLRKLPPDSPDWNDAKKSLEIISTAASHSNSAIRKMENLKKLLEIYEMLGEEEDIVNPSNELIKEGQILKLAARNTSAQERYLFLFNNMLLYCVPRFSLVGSKFTVRTRVGIDGMKIVETHNEEYPHTFQVSGKERTLELQASSEQDKEEWIKALQETIDAFHQRHETFRNAIAKDNDIHLEVSTAELGKRAPRWIRDNEVTMCMKCKEPFNALTRRRHHCRACGHVVCWKCSDYKAQLEYDGGKLSKVCKDCYQIISGFTDSEEKKRKGILEIESAEVSGNSVVCSFLQYMEKSKPWQKAWCVIPKQDPLVLYMYGAPQDVRAQATIPLLGYVVDDMPRSADLPHSFKLTQSKSVHSFAADSEELKQKWLKIILLAVTGETPDGPSKQPDALDEHPESKRQSEC
SIO_010081: FGD4
subclass of: SO_0000673
so part of: FGD4
location: complement(join(1017175..1017432,1018482..1018622,1020781..1020921,1023891..1024016,1024340..1024432,1024642..1024672,1028073..1028245,1034002..1034148,1034477..1034535,1036882..1037020,1042258..1042414,1042850..1042995,1045014..1045103,1061279..1061777,1065889..1066072,1074081..1074233,1091674..1091689))
location: region:1017175-1091689:-1
so has part: feature:1091674-1091689:-1:exon
so has part: feature:1074081-1074233:-1:exon
so has part: feature:1065889-1066072:-1:exon
so has part: feature:1061279-1061777:-1:exon
so has part: feature:1045014-1045103:-1:exon
so has part: feature:1042850-1042995:-1:exon
so has part: feature:1042258-1042414:-1:exon
so has part: feature:1036882-1037020:-1:exon
so has part: feature:1034477-1034535:-1:exon
so has part: feature:1034002-1034148:-1:exon
so has part: feature:1028073-1028245:-1:exon
so has part: feature:1024642-1024672:-1:exon
so has part: feature:1024340-1024432:-1:exon
so has part: feature:1023891-1024016:-1:exon
so has part: feature:1020781-1020921:-1:exon
so has part: feature:1018482-1018622:-1:exon
so has part: feature:1017175-1017432:-1:exon

XP_006184313.1
type: Protein
SIO_000068: ncbiprotein

position:1091689:-1
position: 1091689
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1091674-1091689:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1074081-1074233:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1065889-1066072:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1061279-1061777:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1045014-1045103:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1042850-1042995:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1042258-1042414:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1036882-1037020:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1034477-1034535:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1034002-1034148:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1028073-1028245:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1024642-1024672:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1024340-1024432:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1023891-1024016:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1020781-1020921:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1018482-1018622:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1017175-1017432:-1:exon

FGD4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 419612
gene: FGD4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: FYVE, RhoGEF and PH domain-containing protein 4 isoform X6
translation: MEEVKPASASCVSKEKPSKVSDLISRFEGGSPLSNYSDLKKDPAVNLNVPRTPGRHGLTTTPQQKLLSQRSPRKQGHNPDQAQGVQTRVANGIIAAQNQMECEEDKAAALSAETPIQTSEPSPDTSLVNGEREETTTGPASPTANHCDGNADDRTPGVGPALPLGEGRADAETKVQERENRESPQELDQLDQHHEMKETDEQKLHKIANELLLTERAYVSRLDLLDQVFYCKLLEEANRGSFPAEMVNKIFSNISSINAFHSKFLLPELEKRMQEWETTPRIGDILQKLAPFLKMYGEYVKGFDHAMELVKNMTERIPQFKSVVEDIQKQRICGNLTLQHHMLEPVQRIPRYEMLLKDYLRKLPPDSPDWNDAKKSLEIISTAASHSNSAIRKMENLKKLLEIYEMLGEEEDIVNPSNELIKEGQILKLAARNTSAQERYLFLFNNMLLYCVPRFSLVGSKFTVRTRVGIDGMKIVETHNEEYPHTFQVSGKERTLELQASSEQDKEEWIKALQETIDAFHQRHETFRNAIAKDNDIHLEVSTAELGKRAPRWIRDNEVTMCMKCKEPFNALTRRRHHCRACGHVVCWKCSDYKAQLEYDGGKLSKVCKDCYQIISGFTDSEEKKRKGILEIESAEVSGNSVVCSFLQYMEKSKPWQKAWCVIPKQDPLVLYMYGAPQDVRAQATIPLLGYVVDDMPRSADLPHSFKLTQSKSVHSFAADSEELKQKWLKIILLAVTGETPDGPSKQPDALDEHPESKRQSEC
SIO_010081: FGD4
subclass of: SO_0000673
so part of: FGD4
location: complement(join(1017175..1017432,1018482..1018622,1020781..1020921,1023891..1024016,1024340..1024432,1024642..1024672,1028073..1028245,1034002..1034148,1034477..1034535,1036882..1037020,1042258..1042414,1042850..1042995,1045014..1045103,1061279..1061777,1065889..1065980))
location: region:1017175-1065980:-1
so has part: feature:1065889-1065980:-1:exon
so has part: feature:1061279-1061777:-1:exon
so has part: feature:1045014-1045103:-1:exon
so has part: feature:1042850-1042995:-1:exon
so has part: feature:1042258-1042414:-1:exon
so has part: feature:1036882-1037020:-1:exon
so has part: feature:1034477-1034535:-1:exon
so has part: feature:1034002-1034148:-1:exon
so has part: feature:1028073-1028245:-1:exon
so has part: feature:1024642-1024672:-1:exon
so has part: feature:1024340-1024432:-1:exon
so has part: feature:1023891-1024016:-1:exon
so has part: feature:1020781-1020921:-1:exon
so has part: feature:1018482-1018622:-1:exon
so has part: feature:1017175-1017432:-1:exon

XP_032328884.1
type: Protein
SIO_000068: ncbiprotein

position:1065980:-1
position: 1065980
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1065889-1065980:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1061279-1061777:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1045014-1045103:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1042850-1042995:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1042258-1042414:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1036882-1037020:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1034477-1034535:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1034002-1034148:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1028073-1028245:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1024642-1024672:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1024340-1024432:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1023891-1024016:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1020781-1020921:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1018482-1018622:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1017175-1017432:-1:exon

FGD4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 419612
gene: FGD4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: FYVE, RhoGEF and PH domain-containing protein 4 isoform X6
translation: MEEVKPASASCVSKEKPSKVSDLISRFEGGSPLSNYSDLKKDPAVNLNVPRTPGRHGLTTTPQQKLLSQRSPRKQGHNPDQAQGVQTRVANGIIAAQNQMECEEDKAAALSAETPIQTSEPSPDTSLVNGEREETTTGPASPTANHCDGNADDRTPGVGPALPLGEGRADAETKVQERENRESPQELDQLDQHHEMKETDEQKLHKIANELLLTERAYVSRLDLLDQVFYCKLLEEANRGSFPAEMVNKIFSNISSINAFHSKFLLPELEKRMQEWETTPRIGDILQKLAPFLKMYGEYVKGFDHAMELVKNMTERIPQFKSVVEDIQKQRICGNLTLQHHMLEPVQRIPRYEMLLKDYLRKLPPDSPDWNDAKKSLEIISTAASHSNSAIRKMENLKKLLEIYEMLGEEEDIVNPSNELIKEGQILKLAARNTSAQERYLFLFNNMLLYCVPRFSLVGSKFTVRTRVGIDGMKIVETHNEEYPHTFQVSGKERTLELQASSEQDKEEWIKALQETIDAFHQRHETFRNAIAKDNDIHLEVSTAELGKRAPRWIRDNEVTMCMKCKEPFNALTRRRHHCRACGHVVCWKCSDYKAQLEYDGGKLSKVCKDCYQIISGFTDSEEKKRKGILEIESAEVSGNSVVCSFLQYMEKSKPWQKAWCVIPKQDPLVLYMYGAPQDVRAQATIPLLGYVVDDMPRSADLPHSFKLTQSKSVHSFAADSEELKQKWLKIILLAVTGETPDGPSKQPDALDEHPESKRQSEC
SIO_010081: FGD4
subclass of: SO_0000673
so part of: FGD4
location: complement(join(1017175..1017432,1018482..1018622,1020781..1020921,1023891..1024016,1024340..1024432,1024642..1024672,1028073..1028245,1034002..1034148,1034477..1034535,1036882..1037020,1042258..1042414,1042850..1042995,1045014..1045103,1061279..1061777,1065889..1065980))
location: region:1017175-1065980:-1
so has part: feature:1065889-1065980:-1:exon
so has part: feature:1061279-1061777:-1:exon
so has part: feature:1045014-1045103:-1:exon
so has part: feature:1042850-1042995:-1:exon
so has part: feature:1042258-1042414:-1:exon
so has part: feature:1036882-1037020:-1:exon
so has part: feature:1034477-1034535:-1:exon
so has part: feature:1034002-1034148:-1:exon
so has part: feature:1028073-1028245:-1:exon
so has part: feature:1024642-1024672:-1:exon
so has part: feature:1024340-1024432:-1:exon
so has part: feature:1023891-1024016:-1:exon
so has part: feature:1020781-1020921:-1:exon
so has part: feature:1018482-1018622:-1:exon
so has part: feature:1017175-1017432:-1:exon

XP_032328885.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1065889-1065980:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1061279-1061777:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1045014-1045103:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1042850-1042995:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1042258-1042414:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1036882-1037020:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1034477-1034535:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1034002-1034148:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1028073-1028245:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1024642-1024672:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1024340-1024432:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1023891-1024016:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1020781-1020921:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1018482-1018622:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1017175-1017432:-1:exon

FGD4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 419612
gene: FGD4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: FYVE, RhoGEF and PH domain-containing protein 4 isoform X7
translation: MECEEDKAAALSAETPIQTSEPSPDTSLVNGEREETTTGPASPTANHCDGNADDRTPGVGPALPLGEGRADAETKVQERENRESPQELDQLDQHHEMKETDEQKLHKIANELLLTERAYVSRLDLLDQVFYCKLLEEANRGSFPAEMVNKIFSNISSINAFHSKFLLPELEKRMQEWETTPRIGDILQKLAPFLKMYGEYVKGFDHAMELVKNMTERIPQFKSVVEDIQKQRICGNLTLQHHMLEPVQRIPRYEMLLKDYLRKLPPDSPDWNDAKKSLEIISTAASHSNSAIRKMENLKKLLEIYEMLGEEEDIVNPSNELIKEGQILKLAARNTSAQERYLFLFNNMLLYCVPRFSLVGSKFTVRTRVGIDGMKIVETHNEEYPHTFQVSGKERTLELQASSEQDKEEWIKALQETIDAFHQRHETFRNAIAKDNDIHLEVSTAELGKRAPRWIRDNEVTMCMKCKEPFNALTRRRHHCRACGHVVCWKCSDYKAQLEYDGGKLSKVCKDCYQIISGFTDSEEKKRKGILEIESAEVSGNSVVCSFLQYMEKSKPWQKAWCVIPKQDPLVLYMYGAPQDVRAQATIPLLGYVVDDMPRSADLPHSFKLTQSKSVHSFAADSEELKQKWLKIILLAVTGETPDGPSKQPDALDEHPESKRQSEC
SIO_010081: FGD4
subclass of: SO_0000673
so part of: FGD4
location: complement(join(1017175..1017432,1018482..1018622,1020781..1020921,1023891..1024016,1024340..1024432,1024642..1024672,1028073..1028245,1034002..1034148,1034477..1034535,1036882..1037020,1042258..1042414,1042850..1042995,1045014..1045103,1061279..1061572))
location: region:1017175-1061572:-1
so has part: feature:1061279-1061572:-1:exon
so has part: feature:1045014-1045103:-1:exon
so has part: feature:1042850-1042995:-1:exon
so has part: feature:1042258-1042414:-1:exon
so has part: feature:1036882-1037020:-1:exon
so has part: feature:1034477-1034535:-1:exon
so has part: feature:1034002-1034148:-1:exon
so has part: feature:1028073-1028245:-1:exon
so has part: feature:1024642-1024672:-1:exon
so has part: feature:1024340-1024432:-1:exon
so has part: feature:1023891-1024016:-1:exon
so has part: feature:1020781-1020921:-1:exon
so has part: feature:1018482-1018622:-1:exon
so has part: feature:1017175-1017432:-1:exon

XP_032328886.1
type: Protein
SIO_000068: ncbiprotein

position:1061572:-1
position: 1061572
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1061279-1061572:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1045014-1045103:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1042850-1042995:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1042258-1042414:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1036882-1037020:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1034477-1034535:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1034002-1034148:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1028073-1028245:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1024642-1024672:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1024340-1024432:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1023891-1024016:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1020781-1020921:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1018482-1018622:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1017175-1017432:-1:exon

LOC116661350
type: Gene
subclass of: SO_0000704
RO_0002162: 419612
gene: LOC116661350
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: 1163688..1164938
location: region:1163688-1164938:1
so has part: feature:1163688-1164938:1:exon

116661350
type: Gene
SIO_000068: ncbigene

position:1163688:1
position: 1163688
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1164938:1
position: 1164938
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1163688-1164938:1:exon

LOC116661350
type: Exon
subclass of: SO_0000147
RO_0002162: 419612
gene: LOC116661350
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins, and 70% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC116661350
subclass of: SO_0000673
so part of: LOC116661350
location: 1163688..1163719
location: region:1163688-1163719:1
so has part: feature:1163688-1163719:1:exon

position:1163719:1
position: 1163719
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1163688-1163719:1:exon

LOC116661350
type: Exon
subclass of: SO_0000147
RO_0002162: 419612
gene: LOC116661350
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins, and 70% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC116661350
subclass of: SO_0000673
so part of: LOC116661350
location: 1164139..1164938
location: region:1164139-1164938:1
so has part: feature:1164139-1164938:1:exon

position:1164139:1
position: 1164139
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1164139-1164938:1:exon

LOC116661283
type: Gene
subclass of: SO_0000704
RO_0002162: 419612
gene: LOC116661283
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1165941..1170031
location: region:1165941-1170031:1
so has part: feature:1165941-1170031:1:exon
subclass of: SO_0000011

116661283
type: Gene
SIO_000068: ncbigene

position:1165941:1
position: 1165941
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1170031:1
position: 1170031
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1165941-1170031:1:exon

LOC116661283
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 419612
nc RNA class: lncRNA
gene: LOC116661283
product: uncharacterized LOC116661283
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XR_004317122.1
SIO_010081: LOC116661283
subclass of: SO_0000673
so part of: LOC116661283
location: join(1165941..1166225,1167762..1167765,1170022..1170031)
location: region:1165941-1170031:1
so has part: feature:1165941-1166225:1:exon
so has part: feature:1167762-1167765:1:exon
so has part: feature:1170022-1170031:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1165941-1166225:1:exon

position:1166225:1
position: 1166225
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1167762-1167765:1:exon

position:1167762:1
position: 1167762
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1167765:1
position: 1167765
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1170022-1170031:1:exon

position:1170022:1
position: 1170022
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

BICD1
type: Gene
subclass of: SO_0000704
RO_0002162: 419612
gene: BICD1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1196089..1368624)
location: region:1196089-1368624:-1
so has part: feature:1196089-1368624:-1:exon
subclass of: SO_0000010

102506964
type: Gene
SIO_000068: ncbigene

position:1196089:-1
position: 1196089
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1368624:-1
position: 1368624
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1196089-1368624:-1:exon

BICD1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 419612
gene: BICD1
product: BICD cargo adaptor 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_032472996.1
SIO_010081: BICD1
subclass of: SO_0000673
so part of: BICD1
location: complement(join(1196089..1202330,1230168..1230361,1231349..1231666,1234330..1234481,1238282..1239373,1249760..1250185,1256725..1256877,1286237..1286449,1367934..1368624))
location: region:1196089-1368624:-1
so has part: feature:1367934-1368624:-1:exon
so has part: feature:1286237-1286449:-1:exon
so has part: feature:1256725-1256877:-1:exon
so has part: feature:1249760-1250185:-1:exon
so has part: feature:1238282-1239373:-1:exon
so has part: feature:1234330-1234481:-1:exon
so has part: feature:1231349-1231666:-1:exon
so has part: feature:1230168-1230361:-1:exon
so has part: feature:1196089-1202330:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1367934-1368624:-1:exon

position:1367934:-1
position: 1367934
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1286237-1286449:-1:exon

position:1286237:-1
position: 1286237
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1286449:-1
position: 1286449
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1256725-1256877:-1:exon

position:1256725:-1
position: 1256725
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1256877:-1
position: 1256877
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1249760-1250185:-1:exon

position:1249760:-1
position: 1249760
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1250185:-1
position: 1250185
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1238282-1239373:-1:exon

position:1238282:-1
position: 1238282
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1239373:-1
position: 1239373
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1234330-1234481:-1:exon

position:1234330:-1
position: 1234330
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1234481:-1
position: 1234481
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1231349-1231666:-1:exon

position:1231349:-1
position: 1231349
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1231666:-1
position: 1231666
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1230168-1230361:-1:exon

position:1230168:-1
position: 1230168
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1230361:-1
position: 1230361
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1196089-1202330:-1:exon

position:1202330:-1
position: 1202330
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

BICD1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 419612
gene: BICD1
product: BICD cargo adaptor 1, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_032472999.1
SIO_010081: BICD1
subclass of: SO_0000673
so part of: BICD1
location: complement(join(1196089..1202330,1207519..1207604,1231459..1231666,1234330..1234481,1238282..1239373,1249760..1250185,1256725..1256877,1286237..1286449,1367934..1368146))
location: region:1196089-1368146:-1
so has part: feature:1367934-1368146:-1:exon
so has part: feature:1286237-1286449:-1:exon
so has part: feature:1256725-1256877:-1:exon
so has part: feature:1249760-1250185:-1:exon
so has part: feature:1238282-1239373:-1:exon
so has part: feature:1234330-1234481:-1:exon
so has part: feature:1231459-1231666:-1:exon
so has part: feature:1207519-1207604:-1:exon
so has part: feature:1196089-1202330:-1:exon

position:1368146:-1
position: 1368146
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1367934-1368146:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1286237-1286449:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1256725-1256877:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1249760-1250185:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1238282-1239373:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1234330-1234481:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1231459-1231666:-1:exon

position:1231459:-1
position: 1231459
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1207519-1207604:-1:exon

position:1207519:-1
position: 1207519
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1207604:-1
position: 1207604
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1196089-1202330:-1:exon

BICD1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 419612
gene: BICD1
product: BICD cargo adaptor 1, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_032472998.1
SIO_010081: BICD1
subclass of: SO_0000673
so part of: BICD1
location: complement(join(1196089..1202330,1231349..1231666,1234330..1234481,1238282..1239373,1249760..1250185,1256725..1256877,1286237..1286449,1367934..1368146))
location: region:1196089-1368146:-1
so has part: feature:1367934-1368146:-1:exon
so has part: feature:1286237-1286449:-1:exon
so has part: feature:1256725-1256877:-1:exon
so has part: feature:1249760-1250185:-1:exon
so has part: feature:1238282-1239373:-1:exon
so has part: feature:1234330-1234481:-1:exon
so has part: feature:1231349-1231666:-1:exon
so has part: feature:1196089-1202330:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1367934-1368146:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1286237-1286449:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1256725-1256877:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1249760-1250185:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1238282-1239373:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1234330-1234481:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1231349-1231666:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1196089-1202330:-1:exon

BICD1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 419612
gene: BICD1
product: BICD cargo adaptor 1, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_006192302.3
SIO_010081: BICD1
subclass of: SO_0000673
so part of: BICD1
location: complement(join(1196089..1202330,1207519..1207594,1230168..1230361,1231349..1231666,1234330..1234481,1238282..1239373,1249760..1250185,1256725..1256877,1286237..1286449,1367934..1368146))
location: region:1196089-1368146:-1
so has part: feature:1367934-1368146:-1:exon
so has part: feature:1286237-1286449:-1:exon
so has part: feature:1256725-1256877:-1:exon
so has part: feature:1249760-1250185:-1:exon
so has part: feature:1238282-1239373:-1:exon
so has part: feature:1234330-1234481:-1:exon
so has part: feature:1231349-1231666:-1:exon
so has part: feature:1230168-1230361:-1:exon
so has part: feature:1207519-1207594:-1:exon
so has part: feature:1196089-1202330:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1367934-1368146:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1286237-1286449:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1256725-1256877:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1249760-1250185:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1238282-1239373:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1234330-1234481:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1231349-1231666:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1230168-1230361:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1207519-1207594:-1:exon

position:1207594:-1
position: 1207594
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1196089-1202330:-1:exon

BICD1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 419612
gene: BICD1
product: BICD cargo adaptor 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_032472997.1
SIO_010081: BICD1
subclass of: SO_0000673
so part of: BICD1
location: complement(join(1196089..1202330,1207519..1207594,1216207..1216215,1230168..1230361,1231349..1231666,1234330..1234481,1238282..1239373,1249760..1250185,1256725..1256877,1286237..1286449,1367934..1368146))
location: region:1196089-1368146:-1
so has part: feature:1367934-1368146:-1:exon
so has part: feature:1286237-1286449:-1:exon
so has part: feature:1256725-1256877:-1:exon
so has part: feature:1249760-1250185:-1:exon
so has part: feature:1238282-1239373:-1:exon
so has part: feature:1234330-1234481:-1:exon
so has part: feature:1231349-1231666:-1:exon
so has part: feature:1230168-1230361:-1:exon
so has part: feature:1216207-1216215:-1:exon
so has part: feature:1207519-1207594:-1:exon
so has part: feature:1196089-1202330:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1367934-1368146:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1286237-1286449:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1256725-1256877:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1249760-1250185:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1238282-1239373:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1234330-1234481:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1231349-1231666:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1230168-1230361:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1216207-1216215:-1:exon

position:1216207:-1
position: 1216207
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1216215:-1
position: 1216215
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1207519-1207594:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1196089-1202330:-1:exon

BICD1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 419612
gene: BICD1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein bicaudal D homolog 1 isoform X1
translation: MAAEEVLQTVDHYKTEIERLTKELTETTHEKIQAAEYGLVVLEEKLTLKQQYDELEAEYDSLKQELEQLKEAFGQSFSIHRKVAEDGETREETLLQESASKEAYYLGKILEMQNELKQSRAVVTNVQAENERLTAVVQDLKENNEMLELQRIRMKDEIREYKFREARLLQDYTELEEENITLQKLVSTLKQNQVEYEGLKHEIKRFEEETVLLNSQLEDAIRLKEIAEHQLEEALETLKNEREQKNSLRKELSQYITLGDNHIGISVDGLKFAEDGAEPNNDDKMNGHIHAPLVKLNGDYRTPTLRKGEALHPVSDLFSELNISEIQKLKQQLMQVEREKAILLANLQESQTQLEHTKGALTEQHERVHRLTEHVNAMKGLQSSKELKELDGEKGRDSGEEAHDYEVDINGLEILECKYRVAVTEVIDLKAEIKALKEKYNKSVENYTEEKAKYESKIQMYDEQVTSLEKTSKESGEKMAHMEKELQKMTSIANENHNTLNTAQDELVTFSEELAQLYHHVCLCNNETPNRVMLDYYRQSRVTRSGSLKGPDDPRGLLSPRLARRGVSSPVETRTSPEPVSKENTEASKEPSPTKTPTVSPVITAPPSSPVLDTSDIRKEPMNIYNLNAIIRDQIKHLQKAVDRSLQLSRQRAAARELAPMIDKDKEALMEEILKLKSLLSTKREQIATLRAVLKANKQTAEVALANLKNKYENEKAMVTETMTKLRNELKALKEDAATFSSLRAMFATRCDEYVTQLDEMQRQLAAAEDEKKTLNTLLRMAIQQKLALTQRLEDLEFDHEQSRRSKGKLGKSKIGSPKVSGEASVTVPTIDTSLLHSQGPQTPSIRVRSGTQRKRQFSPSLCDQSRPRTSGASYLQNLLRVPPDPTSTESFLLKGPPSMSEFIQGHRLSKEKRLTVAPPVLTQLSPRSSHTPAPSAPLSTVSPSLLTPSLRPPPTNTWGHHFVATHRILPKIHGVFSSRWLDVGSD
SIO_010081: BICD1
subclass of: SO_0000673
so part of: BICD1
location: complement(join(1202128..1202330,1230168..1230361,1231349..1231666,1234330..1234481,1238282..1239373,1249760..1250185,1256725..1256877,1286237..1286449,1367934..1368146))
location: region:1202128-1368146:-1
so has part: feature:1367934-1368146:-1:exon
so has part: feature:1286237-1286449:-1:exon
so has part: feature:1256725-1256877:-1:exon
so has part: feature:1249760-1250185:-1:exon
so has part: feature:1238282-1239373:-1:exon
so has part: feature:1234330-1234481:-1:exon
so has part: feature:1231349-1231666:-1:exon
so has part: feature:1230168-1230361:-1:exon
so has part: feature:1202128-1202330:-1:exon

XP_032328887.1
type: Protein
SIO_000068: ncbiprotein

position:1202128:-1
position: 1202128
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1367934-1368146:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1286237-1286449:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1256725-1256877:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1249760-1250185:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1238282-1239373:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1234330-1234481:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1231349-1231666:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1230168-1230361:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1202128-1202330:-1:exon

BICD1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 419612
gene: BICD1
product: BICD cargo adaptor 1, transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 12 samples with support for all annotated introns
transcript id: XM_006192303.3
SIO_010081: BICD1
subclass of: SO_0000673
so part of: BICD1
location: complement(join(1202196..1202330,1207519..1207594,1231459..1231666,1234330..1234481,1238282..1239373,1249760..1250185,1256725..1256877,1286237..1286449,1367934..1368146))
location: region:1202196-1368146:-1
so has part: feature:1367934-1368146:-1:exon
so has part: feature:1286237-1286449:-1:exon
so has part: feature:1256725-1256877:-1:exon
so has part: feature:1249760-1250185:-1:exon
so has part: feature:1238282-1239373:-1:exon
so has part: feature:1234330-1234481:-1:exon
so has part: feature:1231459-1231666:-1:exon
so has part: feature:1207519-1207594:-1:exon
so has part: feature:1202196-1202330:-1:exon

position:1202196:-1
position: 1202196
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1367934-1368146:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1286237-1286449:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1256725-1256877:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1249760-1250185:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1238282-1239373:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1234330-1234481:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1231459-1231666:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1207519-1207594:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1202196-1202330:-1:exon

BICD1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 419612
gene: BICD1
product: BICD cargo adaptor 1, transcript variant X8
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 21 samples with support for all annotated introns
transcript id: XM_014565693.2
SIO_010081: BICD1
subclass of: SO_0000673
so part of: BICD1
location: complement(join(1202200..1202330,1231459..1231666,1234330..1234481,1238282..1239373,1249760..1250185,1256725..1256877,1286237..1286449,1367934..1368146))
location: region:1202200-1368146:-1
so has part: feature:1367934-1368146:-1:exon
so has part: feature:1286237-1286449:-1:exon
so has part: feature:1256725-1256877:-1:exon
so has part: feature:1249760-1250185:-1:exon
so has part: feature:1238282-1239373:-1:exon
so has part: feature:1234330-1234481:-1:exon
so has part: feature:1231459-1231666:-1:exon
so has part: feature:1202200-1202330:-1:exon

position:1202200:-1
position: 1202200
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1367934-1368146:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1286237-1286449:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1256725-1256877:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1249760-1250185:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1238282-1239373:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1234330-1234481:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1231459-1231666:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1202200-1202330:-1:exon

BICD1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 419612
gene: BICD1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein bicaudal D homolog 1 isoform X5
translation: MAAEEVLQTVDHYKTEIERLTKELTETTHEKIQAAEYGLVVLEEKLTLKQQYDELEAEYDSLKQELEQLKEAFGQSFSIHRKVAEDGETREETLLQESASKEAYYLGKILEMQNELKQSRAVVTNVQAENERLTAVVQDLKENNEMLELQRIRMKDEIREYKFREARLLQDYTELEEENITLQKLVSTLKQNQVEYEGLKHEIKRFEEETVLLNSQLEDAIRLKEIAEHQLEEALETLKNEREQKNSLRKELSQYITLGDNHIGISVDGLKFAEDGAEPNNDDKMNGHIHAPLVKLNGDYRTPTLRKGEALHPVSDLFSELNISEIQKLKQQLMQVEREKAILLANLQESQTQLEHTKGALTEQHERVHRLTEHVNAMKGLQSSKELKELDGEKGRDSGEEAHDYEVDINGLEILECKYRVAVTEVIDLKAEIKALKEKYNKSVENYTEEKAKYESKIQMYDEQVTSLEKTSKESGEKMAHMEKELQKMTSIANENHNTLNTAQDELVTFSEELAQLYHHVCLCNNETPNRVMLDYYRQSRVTRSGSLKGPDDPRGLLSPRLARRGVSSPVETRTSPEPVSKENTEASKEPSPTKTPTVSPVITAPPSSPVLDTSDIRKEPMNIYNLNAIIRDQIKHLQKAVDRSLQLSRQRAAARELAPMIDKDKEALMEEILKLKSLLSTKREQIATLRAVLKANKQTAEVALANLKNKYENEKAMVTETMTKLRNELKALKEDAATFSSLRAMFATRCDEYVTQLDEMQRQLAAAEDEKKTLNTLLRMAIQQKLALTQRLEDLEFDHEQSRRSKGKLGKSKIGSPKFLIDCQQPAASVPPQCSQLAGRQDCPTVSPDTAVPEEQPHPSSQCAPLHCLSKPPHP
SIO_010081: BICD1
subclass of: SO_0000673
so part of: BICD1
location: complement(join(1202243..1202330,1207519..1207604,1231459..1231666,1234330..1234481,1238282..1239373,1249760..1250185,1256725..1256877,1286237..1286449,1367934..1368146))
location: region:1202243-1368146:-1
so has part: feature:1367934-1368146:-1:exon
so has part: feature:1286237-1286449:-1:exon
so has part: feature:1256725-1256877:-1:exon
so has part: feature:1249760-1250185:-1:exon
so has part: feature:1238282-1239373:-1:exon
so has part: feature:1234330-1234481:-1:exon
so has part: feature:1231459-1231666:-1:exon
so has part: feature:1207519-1207604:-1:exon
so has part: feature:1202243-1202330:-1:exon

XP_032328890.1
type: Protein
SIO_000068: ncbiprotein

position:1202243:-1
position: 1202243
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1367934-1368146:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1286237-1286449:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1256725-1256877:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1249760-1250185:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1238282-1239373:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1234330-1234481:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1231459-1231666:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1207519-1207604:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1202243-1202330:-1:exon

BICD1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 419612
gene: BICD1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein bicaudal D homolog 1 isoform X4
translation: MAAEEVLQTVDHYKTEIERLTKELTETTHEKIQAAEYGLVVLEEKLTLKQQYDELEAEYDSLKQELEQLKEAFGQSFSIHRKVAEDGETREETLLQESASKEAYYLGKILEMQNELKQSRAVVTNVQAENERLTAVVQDLKENNEMLELQRIRMKDEIREYKFREARLLQDYTELEEENITLQKLVSTLKQNQVEYEGLKHEIKRFEEETVLLNSQLEDAIRLKEIAEHQLEEALETLKNEREQKNSLRKELSQYITLGDNHIGISVDGLKFAEDGAEPNNDDKMNGHIHAPLVKLNGDYRTPTLRKGEALHPVSDLFSELNISEIQKLKQQLMQVEREKAILLANLQESQTQLEHTKGALTEQHERVHRLTEHVNAMKGLQSSKELKELDGEKGRDSGEEAHDYEVDINGLEILECKYRVAVTEVIDLKAEIKALKEKYNKSVENYTEEKAKYESKIQMYDEQVTSLEKTSKESGEKMAHMEKELQKMTSIANENHNTLNTAQDELVTFSEELAQLYHHVCLCNNETPNRVMLDYYRQSRVTRSGSLKGPDDPRGLLSPRLARRGVSSPVETRTSPEPVSKENTEASKEPSPTKTPTVSPVITAPPSSPVLDTSDIRKEPMNIYNLNAIIRDQIKHLQKAVDRSLQLSRQRAAARELAPMIDKDKEALMEEILKLKSLLSTKREQIATLRAVLKANKQTAEVALANLKNKYENEKAMVTETMTKLRNELKALKEDAATFSSLRAMFATRCDEYVTQLDEMQRQLAAAEDEKKTLNTLLRMAIQQKLALTQRLEDLEFDHEQSRRSKGKLGKSKIGSPKVSGEASVTVPTIDTSLLHSQGPQTPSIRVRSGTQRKSPDTAVPEEQPHPSSQCAPLHCLSKPPHP
SIO_010081: BICD1
subclass of: SO_0000673
so part of: BICD1
location: complement(join(1202243..1202330,1231349..1231666,1234330..1234481,1238282..1239373,1249760..1250185,1256725..1256877,1286237..1286449,1367934..1368146))
location: region:1202243-1368146:-1
so has part: feature:1367934-1368146:-1:exon
so has part: feature:1286237-1286449:-1:exon
so has part: feature:1256725-1256877:-1:exon
so has part: feature:1249760-1250185:-1:exon
so has part: feature:1238282-1239373:-1:exon
so has part: feature:1234330-1234481:-1:exon
so has part: feature:1231349-1231666:-1:exon
so has part: feature:1202243-1202330:-1:exon

XP_032328889.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1367934-1368146:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1286237-1286449:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1256725-1256877:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1249760-1250185:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1238282-1239373:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1234330-1234481:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1231349-1231666:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1202243-1202330:-1:exon

BICD1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 419612
gene: BICD1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein bicaudal D homolog 1 isoform X3
translation: MAAEEVLQTVDHYKTEIERLTKELTETTHEKIQAAEYGLVVLEEKLTLKQQYDELEAEYDSLKQELEQLKEAFGQSFSIHRKVAEDGETREETLLQESASKEAYYLGKILEMQNELKQSRAVVTNVQAENERLTAVVQDLKENNEMLELQRIRMKDEIREYKFREARLLQDYTELEEENITLQKLVSTLKQNQVEYEGLKHEIKRFEEETVLLNSQLEDAIRLKEIAEHQLEEALETLKNEREQKNSLRKELSQYITLGDNHIGISVDGLKFAEDGAEPNNDDKMNGHIHAPLVKLNGDYRTPTLRKGEALHPVSDLFSELNISEIQKLKQQLMQVEREKAILLANLQESQTQLEHTKGALTEQHERVHRLTEHVNAMKGLQSSKELKELDGEKGRDSGEEAHDYEVDINGLEILECKYRVAVTEVIDLKAEIKALKEKYNKSVENYTEEKAKYESKIQMYDEQVTSLEKTSKESGEKMAHMEKELQKMTSIANENHNTLNTAQDELVTFSEELAQLYHHVCLCNNETPNRVMLDYYRQSRVTRSGSLKGPDDPRGLLSPRLARRGVSSPVETRTSPEPVSKENTEASKEPSPTKTPTVSPVITAPPSSPVLDTSDIRKEPMNIYNLNAIIRDQIKHLQKAVDRSLQLSRQRAAARELAPMIDKDKEALMEEILKLKSLLSTKREQIATLRAVLKANKQTAEVALANLKNKYENEKAMVTETMTKLRNELKALKEDAATFSSLRAMFATRCDEYVTQLDEMQRQLAAAEDEKKTLNTLLRMAIQQKLALTQRLEDLEFDHEQSRRSKGKLGKSKIGSPKVSGEASVTVPTIDTSLLHSQGPQTPSIRVRSGTQRKRQFSPSLCDQSRPRTSGASYLQNLLRVPPDPTSTESFLLKGPPSMSEFIQGHRLSKEKRLTVAPPDCQQPAASVPPQCSQLAGRQDCPTVSPDTAVPEEQPHPSSQCAPLHCLSKPPHP
SIO_010081: BICD1
subclass of: SO_0000673
so part of: BICD1
location: complement(join(1202243..1202330,1207519..1207594,1230168..1230361,1231349..1231666,1234330..1234481,1238282..1239373,1249760..1250185,1256725..1256877,1286237..1286449,1367934..1368146))
location: region:1202243-1368146:-1
so has part: feature:1367934-1368146:-1:exon
so has part: feature:1286237-1286449:-1:exon
so has part: feature:1256725-1256877:-1:exon
so has part: feature:1249760-1250185:-1:exon
so has part: feature:1238282-1239373:-1:exon
so has part: feature:1234330-1234481:-1:exon
so has part: feature:1231349-1231666:-1:exon
so has part: feature:1230168-1230361:-1:exon
so has part: feature:1207519-1207594:-1:exon
so has part: feature:1202243-1202330:-1:exon

XP_006192364.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1367934-1368146:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1286237-1286449:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1256725-1256877:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1249760-1250185:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1238282-1239373:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1234330-1234481:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1231349-1231666:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1230168-1230361:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1207519-1207594:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1202243-1202330:-1:exon

BICD1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 419612
gene: BICD1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein bicaudal D homolog 1 isoform X2
translation: MAAEEVLQTVDHYKTEIERLTKELTETTHEKIQAAEYGLVVLEEKLTLKQQYDELEAEYDSLKQELEQLKEAFGQSFSIHRKVAEDGETREETLLQESASKEAYYLGKILEMQNELKQSRAVVTNVQAENERLTAVVQDLKENNEMLELQRIRMKDEIREYKFREARLLQDYTELEEENITLQKLVSTLKQNQVEYEGLKHEIKRFEEETVLLNSQLEDAIRLKEIAEHQLEEALETLKNEREQKNSLRKELSQYITLGDNHIGISVDGLKFAEDGAEPNNDDKMNGHIHAPLVKLNGDYRTPTLRKGEALHPVSDLFSELNISEIQKLKQQLMQVEREKAILLANLQESQTQLEHTKGALTEQHERVHRLTEHVNAMKGLQSSKELKELDGEKGRDSGEEAHDYEVDINGLEILECKYRVAVTEVIDLKAEIKALKEKYNKSVENYTEEKAKYESKIQMYDEQVTSLEKTSKESGEKMAHMEKELQKMTSIANENHNTLNTAQDELVTFSEELAQLYHHVCLCNNETPNRVMLDYYRQSRVTRSGSLKGPDDPRGLLSPRLARRGVSSPVETRTSPEPVSKENTEASKEPSPTKTPTVSPVITAPPSSPVLDTSDIRKEPMNIYNLNAIIRDQIKHLQKAVDRSLQLSRQRAAARELAPMIDKDKEALMEEILKLKSLLSTKREQIATLRAVLKANKQTAEVALANLKNKYENEKAMVTETMTKLRNELKALKEDAATFSSLRAMFATRCDEYVTQLDEMQRQLAAAEDEKKTLNTLLRMAIQQKLALTQRLEDLEFDHEQSRRSKGKLGKSKIGSPKVSGEASVTVPTIDTSLLHSQGPQTPSIRVRSGTQRKRQFSPSLCDQSRPRTSGASYLQNLLRVPPDPTSTESFLLKGPPSMSEFIQGHRLSKEKRLTVAPPAKRDCQQPAASVPPQCSQLAGRQDCPTVSPDTAVPEEQPHPSSQCAPLHCLSKPPHP
SIO_010081: BICD1
subclass of: SO_0000673
so part of: BICD1
location: complement(join(1202243..1202330,1207519..1207594,1216207..1216215,1230168..1230361,1231349..1231666,1234330..1234481,1238282..1239373,1249760..1250185,1256725..1256877,1286237..1286449,1367934..1368146))
location: region:1202243-1368146:-1
so has part: feature:1367934-1368146:-1:exon
so has part: feature:1286237-1286449:-1:exon
so has part: feature:1256725-1256877:-1:exon
so has part: feature:1249760-1250185:-1:exon
so has part: feature:1238282-1239373:-1:exon
so has part: feature:1234330-1234481:-1:exon
so has part: feature:1231349-1231666:-1:exon
so has part: feature:1230168-1230361:-1:exon
so has part: feature:1216207-1216215:-1:exon
so has part: feature:1207519-1207594:-1:exon
so has part: feature:1202243-1202330:-1:exon

XP_032328888.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1367934-1368146:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1286237-1286449:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1256725-1256877:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1249760-1250185:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1238282-1239373:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1234330-1234481:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1231349-1231666:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1230168-1230361:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1216207-1216215:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1207519-1207594:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1202243-1202330:-1:exon

BICD1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 419612
gene: BICD1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein bicaudal D homolog 1 isoform X8
translation: MAAEEVLQTVDHYKTEIERLTKELTETTHEKIQAAEYGLVVLEEKLTLKQQYDELEAEYDSLKQELEQLKEAFGQSFSIHRKVAEDGETREETLLQESASKEAYYLGKILEMQNELKQSRAVVTNVQAENERLTAVVQDLKENNEMLELQRIRMKDEIREYKFREARLLQDYTELEEENITLQKLVSTLKQNQVEYEGLKHEIKRFEEETVLLNSQLEDAIRLKEIAEHQLEEALETLKNEREQKNSLRKELSQYITLGDNHIGISVDGLKFAEDGAEPNNDDKMNGHIHAPLVKLNGDYRTPTLRKGEALHPVSDLFSELNISEIQKLKQQLMQVEREKAILLANLQESQTQLEHTKGALTEQHERVHRLTEHVNAMKGLQSSKELKELDGEKGRDSGEEAHDYEVDINGLEILECKYRVAVTEVIDLKAEIKALKEKYNKSVENYTEEKAKYESKIQMYDEQVTSLEKTSKESGEKMAHMEKELQKMTSIANENHNTLNTAQDELVTFSEELAQLYHHVCLCNNETPNRVMLDYYRQSRVTRSGSLKGPDDPRGLLSPRLARRGVSSPVETRTSPEPVSKENTEASKEPSPTKTPTVSPVITAPPSSPVLDTSDIRKEPMNIYNLNAIIRDQIKHLQKAVDRSLQLSRQRAAARELAPMIDKDKEALMEEILKLKSLLSTKREQIATLRAVLKANKQTAEVALANLKNKYENEKAMVTETMTKLRNELKALKEDAATFSSLRAMFATRCDEYVTQLDEMQRQLAAAEDEKKTLNTLLRMAIQQKLALTQRLEDLEFDHEQSRRSKGKLGKSKIGSPKS
SIO_010081: BICD1
subclass of: SO_0000673
so part of: BICD1
location: complement(join(1202325..1202330,1231459..1231666,1234330..1234481,1238282..1239373,1249760..1250185,1256725..1256877,1286237..1286449,1367934..1368146))
location: region:1202325-1368146:-1
so has part: feature:1367934-1368146:-1:exon
so has part: feature:1286237-1286449:-1:exon
so has part: feature:1256725-1256877:-1:exon
so has part: feature:1249760-1250185:-1:exon
so has part: feature:1238282-1239373:-1:exon
so has part: feature:1234330-1234481:-1:exon
so has part: feature:1231459-1231666:-1:exon
so has part: feature:1202325-1202330:-1:exon

XP_014421179.1
type: Protein
SIO_000068: ncbiprotein

position:1202325:-1
position: 1202325
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1367934-1368146:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1286237-1286449:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1256725-1256877:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1249760-1250185:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1238282-1239373:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1234330-1234481:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1231459-1231666:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1202325-1202330:-1:exon

BICD1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 419612
gene: BICD1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein bicaudal D homolog 1 isoform X6
translation: MAAEEVLQTVDHYKTEIERLTKELTETTHEKIQAAEYGLVVLEEKLTLKQQYDELEAEYDSLKQELEQLKEAFGQSFSIHRKVAEDGETREETLLQESASKEAYYLGKILEMQNELKQSRAVVTNVQAENERLTAVVQDLKENNEMLELQRIRMKDEIREYKFREARLLQDYTELEEENITLQKLVSTLKQNQVEYEGLKHEIKRFEEETVLLNSQLEDAIRLKEIAEHQLEEALETLKNEREQKNSLRKELSQYITLGDNHIGISVDGLKFAEDGAEPNNDDKMNGHIHAPLVKLNGDYRTPTLRKGEALHPVSDLFSELNISEIQKLKQQLMQVEREKAILLANLQESQTQLEHTKGALTEQHERVHRLTEHVNAMKGLQSSKELKELDGEKGRDSGEEAHDYEVDINGLEILECKYRVAVTEVIDLKAEIKALKEKYNKSVENYTEEKAKYESKIQMYDEQVTSLEKTSKESGEKMAHMEKELQKMTSIANENHNTLNTAQDELVTFSEELAQLYHHVCLCNNETPNRVMLDYYRQSRVTRSGSLKGPDDPRGLLSPRLARRGVSSPVETRTSPEPVSKENTEASKEPSPTKTPTVSPVITAPPSSPVLDTSDIRKEPMNIYNLNAIIRDQIKHLQKAVDRSLQLSRQRAAARELAPMIDKDKEALMEEILKLKSLLSTKREQIATLRAVLKANKQTAEVALANLKNKYENEKAMVTETMTKLRNELKALKEDAATFSSLRAMFATRCDEYVTQLDEMQRQLAAAEDEKKTLNTLLRMAIQQKLALTQRLEDLEFDHEQSRRSKGKLGKSKIGSPKIVSSLLPPYRHSAHN
SIO_010081: BICD1
subclass of: SO_0000673
so part of: BICD1
location: complement(join(1207547..1207594,1231459..1231666,1234330..1234481,1238282..1239373,1249760..1250185,1256725..1256877,1286237..1286449,1367934..1368146))
location: region:1207547-1368146:-1
so has part: feature:1367934-1368146:-1:exon
so has part: feature:1286237-1286449:-1:exon
so has part: feature:1256725-1256877:-1:exon
so has part: feature:1249760-1250185:-1:exon
so has part: feature:1238282-1239373:-1:exon
so has part: feature:1234330-1234481:-1:exon
so has part: feature:1231459-1231666:-1:exon
so has part: feature:1207547-1207594:-1:exon

XP_006192365.1
type: Protein
SIO_000068: ncbiprotein

position:1207547:-1
position: 1207547
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1367934-1368146:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1286237-1286449:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1256725-1256877:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1249760-1250185:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1238282-1239373:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1234330-1234481:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1231459-1231666:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1207547-1207594:-1:exon

BICD1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 419612
gene: BICD1
product: BICD cargo adaptor 1, transcript variant X7
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_032473000.1
SIO_010081: BICD1
subclass of: SO_0000673
so part of: BICD1
location: complement(join(1230221..1230361,1231459..1231666,1234330..1234481,1238282..1239373,1249760..1250185,1256725..1256877,1286237..1286449,1367934..1368146))
location: region:1230221-1368146:-1
so has part: feature:1367934-1368146:-1:exon
so has part: feature:1286237-1286449:-1:exon
so has part: feature:1256725-1256877:-1:exon
so has part: feature:1249760-1250185:-1:exon
so has part: feature:1238282-1239373:-1:exon
so has part: feature:1234330-1234481:-1:exon
so has part: feature:1231459-1231666:-1:exon
so has part: feature:1230221-1230361:-1:exon

position:1230221:-1
position: 1230221
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1367934-1368146:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1286237-1286449:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1256725-1256877:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1249760-1250185:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1238282-1239373:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1234330-1234481:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1231459-1231666:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1230221-1230361:-1:exon

BICD1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 419612
gene: BICD1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein bicaudal D homolog 1 isoform X7
translation: MAAEEVLQTVDHYKTEIERLTKELTETTHEKIQAAEYGLVVLEEKLTLKQQYDELEAEYDSLKQELEQLKEAFGQSFSIHRKVAEDGETREETLLQESASKEAYYLGKILEMQNELKQSRAVVTNVQAENERLTAVVQDLKENNEMLELQRIRMKDEIREYKFREARLLQDYTELEEENITLQKLVSTLKQNQVEYEGLKHEIKRFEEETVLLNSQLEDAIRLKEIAEHQLEEALETLKNEREQKNSLRKELSQYITLGDNHIGISVDGLKFAEDGAEPNNDDKMNGHIHAPLVKLNGDYRTPTLRKGEALHPVSDLFSELNISEIQKLKQQLMQVEREKAILLANLQESQTQLEHTKGALTEQHERVHRLTEHVNAMKGLQSSKELKELDGEKGRDSGEEAHDYEVDINGLEILECKYRVAVTEVIDLKAEIKALKEKYNKSVENYTEEKAKYESKIQMYDEQVTSLEKTSKESGEKMAHMEKELQKMTSIANENHNTLNTAQDELVTFSEELAQLYHHVCLCNNETPNRVMLDYYRQSRVTRSGSLKGPDDPRGLLSPRLARRGVSSPVETRTSPEPVSKENTEASKEPSPTKTPTVSPVITAPPSSPVLDTSDIRKEPMNIYNLNAIIRDQIKHLQKAVDRSLQLSRQRAAARELAPMIDKDKEALMEEILKLKSLLSTKREQIATLRAVLKANKQTAEVALANLKNKYENEKAMVTETMTKLRNELKALKEDAATFSSLRAMFATRCDEYVTQLDEMQRQLAAAEDEKKTLNTLLRMAIQQKLALTQRLEDLEFDHEQSRRSKGKLGKSKIGSPKTIFTFPL
SIO_010081: BICD1
subclass of: SO_0000673
so part of: BICD1
location: complement(join(1230338..1230361,1231459..1231666,1234330..1234481,1238282..1239373,1249760..1250185,1256725..1256877,1286237..1286449,1367934..1368146))
location: region:1230338-1368146:-1
so has part: feature:1367934-1368146:-1:exon
so has part: feature:1286237-1286449:-1:exon
so has part: feature:1256725-1256877:-1:exon
so has part: feature:1249760-1250185:-1:exon
so has part: feature:1238282-1239373:-1:exon
so has part: feature:1234330-1234481:-1:exon
so has part: feature:1231459-1231666:-1:exon
so has part: feature:1230338-1230361:-1:exon

XP_032328891.1
type: Protein
SIO_000068: ncbiprotein

position:1230338:-1
position: 1230338
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1367934-1368146:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1286237-1286449:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1256725-1256877:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1249760-1250185:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1238282-1239373:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1234330-1234481:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1231459-1231666:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1230338-1230361:-1:exon

LOC102506698
type: Gene
subclass of: SO_0000704
RO_0002162: 419612
gene: LOC102506698
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: complement(1277538..1297984)
location: region:1277538-1297984:-1
so has part: feature:1277538-1297984:-1:exon

102506698
type: Gene
SIO_000068: ncbigene

position:1277538:-1
position: 1277538
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1297984:-1
position: 1297984
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1277538-1297984:-1:exon

LOC102506698
type: Exon
subclass of: SO_0000147
RO_0002162: 419612
gene: LOC102506698
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 28 Proteins, and 83% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
pseudo: true
SIO_010081: LOC102506698
subclass of: SO_0000673
so part of: LOC102506698
location: complement(1277538..1278051)
location: region:1277538-1278051:-1
so has part: feature:1277538-1278051:-1:exon

position:1278051:-1
position: 1278051
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1277538-1278051:-1:exon

LOC102506698
type: Exon
subclass of: SO_0000147
RO_0002162: 419612
gene: LOC102506698
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 28 Proteins, and 83% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
pseudo: true
SIO_010081: LOC102506698
subclass of: SO_0000673
so part of: LOC102506698
location: complement(1282371..1282376)
location: region:1282371-1282376:-1
so has part: feature:1282371-1282376:-1:exon

position:1282371:-1
position: 1282371
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1282376:-1
position: 1282376
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1282371-1282376:-1:exon

LOC102506698
type: Exon
subclass of: SO_0000147
RO_0002162: 419612
gene: LOC102506698
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 28 Proteins, and 83% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
pseudo: true
SIO_010081: LOC102506698
subclass of: SO_0000673
so part of: LOC102506698
location: complement(1287833..1287843)
location: region:1287833-1287843:-1
so has part: feature:1287833-1287843:-1:exon

position:1287833:-1
position: 1287833
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1287843:-1
position: 1287843
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1287833-1287843:-1:exon

LOC102506698
type: Exon
subclass of: SO_0000147
RO_0002162: 419612
gene: LOC102506698
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 28 Proteins, and 83% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
pseudo: true
SIO_010081: LOC102506698
subclass of: SO_0000673
so part of: LOC102506698
location: complement(1297979..1297984)
location: region:1297979-1297984:-1
so has part: feature:1297979-1297984:-1:exon

position:1297979:-1
position: 1297979
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1297979-1297984:-1:exon

TRNAS-AGA
type: Gene
subclass of: SO_0000704
RO_0002162: 419612
gene: TRNAS-AGA
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
so part of: sequence
location: 1399352..1399423
location: region:1399352-1399423:1
so has part: feature:1399352-1399423:1:exon
subclass of: SO_0000663

116661406
type: Gene
SIO_000068: ncbigene

position:1399352:1
position: 1399352
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1399423:1
position: 1399423
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1399352-1399423:1:exon

TRNAS-AGA
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 419612
gene: TRNAS-AGA
product: tRNA-Ser
inference: COORDINATES: profile:tRNAscan-SE:1.23
note: transfer RNA serine (anticodon AGA); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:1399384..1399386,aa:Ser,seq:aga)
SIO_010081: TRNAS-AGA
subclass of: SO_0000673
so part of: TRNAS-AGA
location: 1399352..1399423
location: region:1399352-1399423:1
so has part: feature:1399352-1399423:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1399352-1399423:1:exon

TRNAS-AGA
type: Gene
subclass of: SO_0000704
RO_0002162: 419612
gene: TRNAS-AGA
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
so part of: sequence
location: 1400872..1400943
location: region:1400872-1400943:1
so has part: feature:1400872-1400943:1:exon
subclass of: SO_0000663

116661416
type: Gene
SIO_000068: ncbigene

position:1400872:1
position: 1400872
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1400943:1
position: 1400943
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1400872-1400943:1:exon

TRNAS-AGA
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 419612
gene: TRNAS-AGA
product: tRNA-Ser
inference: COORDINATES: profile:tRNAscan-SE:1.23
note: transfer RNA serine (anticodon AGA); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:1400904..1400906,aa:Ser,seq:aga)
SIO_010081: TRNAS-AGA
subclass of: SO_0000673
so part of: TRNAS-AGA
location: 1400872..1400943
location: region:1400872-1400943:1
so has part: feature:1400872-1400943:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1400872-1400943:1:exon

RESF1
type: Gene
subclass of: SO_0000704
RO_0002162: 419612
gene: RESF1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1425330..1452594)
location: region:1425330-1452594:-1
so has part: feature:1425330-1452594:-1:exon
subclass of: SO_0000010

102507573
type: Gene
SIO_000068: ncbigene

position:1425330:-1
position: 1425330
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1452594:-1
position: 1452594
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1425330-1452594:-1:exon

RESF1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 419612
gene: RESF1
product: retroelement silencing factor 1, transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 24 samples with support for all annotated introns
transcript id: XM_032473338.1
SIO_010081: RESF1
subclass of: SO_0000673
so part of: RESF1
location: complement(join(1425330..1426063,1430001..1435029,1439646..1439711,1443057..1443105,1451114..1451205,1452462..1452592))
location: region:1425330-1452592:-1
so has part: feature:1452462-1452592:-1:exon
so has part: feature:1451114-1451205:-1:exon
so has part: feature:1443057-1443105:-1:exon
so has part: feature:1439646-1439711:-1:exon
so has part: feature:1430001-1435029:-1:exon
so has part: feature:1425330-1426063:-1:exon

position:1452592:-1
position: 1452592
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1452462-1452592:-1:exon

position:1452462:-1
position: 1452462
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1451114-1451205:-1:exon

position:1451114:-1
position: 1451114
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1451205:-1
position: 1451205
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1443057-1443105:-1:exon

position:1443057:-1
position: 1443057
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1443105:-1
position: 1443105
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1439646-1439711:-1:exon

position:1439646:-1
position: 1439646
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1439711:-1
position: 1439711
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1430001-1435029:-1:exon

position:1430001:-1
position: 1430001
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1435029:-1
position: 1435029
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1425330-1426063:-1:exon

position:1426063:-1
position: 1426063
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

RESF1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 419612
gene: RESF1
product: retroelement silencing factor 1, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 20 samples with support for all annotated introns
transcript id: XM_032473337.1
SIO_010081: RESF1
subclass of: SO_0000673
so part of: RESF1
location: complement(join(1425330..1426063,1428646..1428723,1430001..1435029,1439646..1439711,1443057..1443105,1451114..1451205,1452462..1452592))
location: region:1425330-1452592:-1
so has part: feature:1452462-1452592:-1:exon
so has part: feature:1451114-1451205:-1:exon
so has part: feature:1443057-1443105:-1:exon
so has part: feature:1439646-1439711:-1:exon
so has part: feature:1430001-1435029:-1:exon
so has part: feature:1428646-1428723:-1:exon
so has part: feature:1425330-1426063:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1452462-1452592:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1451114-1451205:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1443057-1443105:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1439646-1439711:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1430001-1435029:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1428646-1428723:-1:exon

position:1428646:-1
position: 1428646
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1428723:-1
position: 1428723
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1425330-1426063:-1:exon

RESF1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 419612
gene: RESF1
product: retroelement silencing factor 1, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 23 samples with support for all annotated introns
transcript id: XM_032473335.1
SIO_010081: RESF1
subclass of: SO_0000673
so part of: RESF1
location: complement(join(1425330..1426063,1428646..1428729,1430001..1435029,1439646..1439711,1451114..1451205,1452462..1452591))
location: region:1425330-1452591:-1
so has part: feature:1452462-1452591:-1:exon
so has part: feature:1451114-1451205:-1:exon
so has part: feature:1439646-1439711:-1:exon
so has part: feature:1430001-1435029:-1:exon
so has part: feature:1428646-1428729:-1:exon
so has part: feature:1425330-1426063:-1:exon

position:1452591:-1
position: 1452591
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1452462-1452591:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1451114-1451205:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1439646-1439711:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1430001-1435029:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1428646-1428729:-1:exon

position:1428729:-1
position: 1428729
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1425330-1426063:-1:exon

RESF1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 419612
gene: RESF1
product: retroelement silencing factor 1, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
transcript id: XM_032473336.1
SIO_010081: RESF1
subclass of: SO_0000673
so part of: RESF1
location: complement(join(1425330..1426063,1428646..1428729,1430001..1435029,1439646..1439708,1443057..1443105,1451114..1451205,1452462..1452591))
location: region:1425330-1452591:-1
so has part: feature:1452462-1452591:-1:exon
so has part: feature:1451114-1451205:-1:exon
so has part: feature:1443057-1443105:-1:exon
so has part: feature:1439646-1439708:-1:exon
so has part: feature:1430001-1435029:-1:exon
so has part: feature:1428646-1428729:-1:exon
so has part: feature:1425330-1426063:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1452462-1452591:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1451114-1451205:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1443057-1443105:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1439646-1439708:-1:exon

position:1439708:-1
position: 1439708
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1430001-1435029:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1428646-1428729:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1425330-1426063:-1:exon

RESF1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 419612
gene: RESF1
product: retroelement silencing factor 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 27 samples with support for all annotated introns
transcript id: XM_032473333.1
SIO_010081: RESF1
subclass of: SO_0000673
so part of: RESF1
location: complement(join(1425330..1426063,1428646..1428729,1430001..1435029,1439646..1439711,1443057..1443105,1451114..1451205,1452462..1452591))
location: region:1425330-1452591:-1
so has part: feature:1452462-1452591:-1:exon
so has part: feature:1451114-1451205:-1:exon
so has part: feature:1443057-1443105:-1:exon
so has part: feature:1439646-1439711:-1:exon
so has part: feature:1430001-1435029:-1:exon
so has part: feature:1428646-1428729:-1:exon
so has part: feature:1425330-1426063:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1452462-1452591:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1451114-1451205:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1443057-1443105:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1439646-1439711:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1430001-1435029:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1428646-1428729:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1425330-1426063:-1:exon

RESF1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 419612
gene: RESF1
product: retroelement silencing factor 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 29 samples with support for all annotated introns
transcript id: XM_032473334.1
SIO_010081: RESF1
subclass of: SO_0000673
so part of: RESF1
location: complement(join(1425330..1426063,1428646..1428729,1430001..1435029,1439646..1439711,1443057..1451205,1452462..1452591))
location: region:1425330-1452591:-1
so has part: feature:1452462-1452591:-1:exon
so has part: feature:1443057-1451205:-1:exon
so has part: feature:1439646-1439711:-1:exon
so has part: feature:1430001-1435029:-1:exon
so has part: feature:1428646-1428729:-1:exon
so has part: feature:1425330-1426063:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1452462-1452591:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1443057-1451205:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1439646-1439711:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1430001-1435029:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1428646-1428729:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1425330-1426063:-1:exon

RESF1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 419612
gene: RESF1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: retroelement silencing factor 1 isoform X3
translation: MNWNAKPESVTLPPQYPKKQASFLEQALVNTLSMTSQSSLNHPGSNQEGCPFLSNSNPVSQPLLNIRNYKSQQMPISDMHGGTIVTSQTSVERIIHANVKGPKQRSHDLHMPSGVTQDVWLNSPMRNSMLSHTGATVSHQTGFGTNMPNVHALQNQFVTSDTYSMQIHMIPSNSGRVPVTYQGNPRLNPPLPEQQVDWSQQCASSGLPYPDYRPLPKQYSYSPRSFLQDPPFQEQNPMSSVSLQVKKSHPPNPALTLQSKQTATVPSYQYAVTQTDKRPPPPPYDCRYASRPLQRTQHVVKVPSMEVPHSQDVHLPEMRKEFFKGFQQQWQNVNESFSMMGNPCNLRGNSNVSQPFDEPVRSSVDGVQALAQSNQEERMNSRNLTSNQVLDTSATKEKLVRDIKTLVEIKKKFSDLARKIKINKNLLMAAGCIKTTNTPYGESAQNSELSLKQTVKIQPGPQVTLVTPQTAENKPPTVMGSAEETNRIHSTLNSTLQDRNFNQVSSVLLNSACSEKLPIPEGLHDLKVVSSLKTSAVEITQATLNNTQFSSGNFVNIAQNGPTNSETASLPQSTSFEEYASKYPNKNRLILSLLAPGDKTLKTLLKDTNETIQDSKLHSFEINPNAQNTGDQLNLKTMETPSTCNINAKISDSSSCFQLKSLNELSSKSDHHFSTELLATCLSLWKKQPSELTEGKPCNESKANRTAVGLSKPVETCEKSPLPAVGNCQNKIVNSSQEAILSMVAQNYESSGTTTTKGIAVVSPLILSDVKTLSVRGATPEALPEAVYPVIEEGSVCSLQNKLVEDTASKITVNEPVTSTTSSKVFPLIQKEKHEPMNANSEGTPHASQGKQNRSEPDTQYPMRDQQASCISKDSDAVSSDVLQIGDICSLVEGDTSYNSQIAKIFNLSPLNKVEPQKPSLPNPQGTNSSQQNEQLDNITENKDFGFQDIVPCTDVSRKITDQSQSLQPSESSSLKYVEAKSGILEESSLEHVAKNEGMADDTCSSAAVQQDSCPQEGDVSCTYTDQDPTRNEILSDKTPILYLHDQLSELLKEFPYGIEPVNLHEGSVVQQTTDQISKAQACDKTGCNSKDSTDQIQITILNLEQMKELFPEQDDQLTEPQEEKPVPKDRKQCDPQARTVEESCESVAVDSEKDDVRCCALGWLSMVYEGVPQCQCSSSENSASKEEGKGPCSPLETSSYKQGQRTDRCDPVAFNKPPSNNPETPVNLPVEKKHVPETEQGKNVEDKSKAKPNSSLRTEQELSGPLLSKADKKLDSSLQSHKRRKRLQFHEITFHSTSKITKFSQEGLQRKLMAQSLRPLKPKMGFLTSKNKDLHMKNGSLVPSVSPEKRKLKAGGSKQKVLEKRKLDEGSVLDSEMKRKKNDKPERGKHVGGGSFKFRSLFSTPSERARIKEKTAPNVTSPGSKDSSSKIHRVLAPKEYLSRQTLIEAGPSGKALKKSYAKSATCDSQHVRPGKLSVRVGSCEKSNSSLQTAKESFNICTSRGKTLKIHHSKESKTYISRNSKGTVGGKQPDKMWIDKTKLDKNLNNANSDVEFSQMSSQAKDQRKLYLNRVAFKCTERERICLTKLDNSPRKLNKEKRPEGKPKSLVPVKDAAEKLSMLEFKLCPEGLFSKNTNPVEDQKDLQPCPRKEQAPVQDDNVLAHSRLAKGSFSADGFETLQNPVKDSKAMFQTYKKMYMEKRSRSLGSSPLE
SIO_010081: RESF1
subclass of: SO_0000673
so part of: RESF1
location: complement(join(1425897..1426063,1430001..1434972))
location: region:1425897-1434972:-1
so has part: feature:1430001-1434972:-1:exon
so has part: feature:1425897-1426063:-1:exon

XP_032329229.1
type: Protein
SIO_000068: ncbiprotein

position:1425897:-1
position: 1425897
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1434972:-1
position: 1434972
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1430001-1434972:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1425897-1426063:-1:exon

RESF1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 419612
gene: RESF1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: retroelement silencing factor 1 isoform X2
translation: MNWNAKPESVTLPPQYPKKQASFLEQALVNTLSMTSQSSLNHPGSNQEGCPFLSNSNPVSQPLLNIRNYKSQQMPISDMHGGTIVTSQTSVERIIHANVKGPKQRSHDLHMPSGVTQDVWLNSPMRNSMLSHTGATVSHQTGFGTNMPNVHALQNQFVTSDTYSMQIHMIPSNSGRVPVTYQGNPRLNPPLPEQQVDWSQQCASSGLPYPDYRPLPKQYSYSPRSFLQDPPFQEQNPMSSVSLQVKKSHPPNPALTLQSKQTATVPSYQYAVTQTDKRPPPPPYDCRYASRPLQRTQHVVKVPSMEVPHSQDVHLPEMRKEFFKGFQQQWQNVNESFSMMGNPCNLRGNSNVSQPFDEPVRSSVDGVQALAQSNQEERMNSRNLTSNQVLDTSATKEKLVRDIKTLVEIKKKFSDLARKIKINKNLLMAAGCIKTTNTPYGESAQNSELSLKQTVKIQPGPQVTLVTPQTAENKPPTVMGSAEETNRIHSTLNSTLQDRNFNQVSSVLLNSACSEKLPIPEGLHDLKVVSSLKTSAVEITQATLNNTQFSSGNFVNIAQNGPTNSETASLPQSTSFEEYASKYPNKNRLILSLLAPGDKTLKTLLKDTNETIQDSKLHSFEINPNAQNTGDQLNLKTMETPSTCNINAKISDSSSCFQLKSLNELSSKSDHHFSTELLATCLSLWKKQPSELTEGKPCNESKANRTAVGLSKPVETCEKSPLPAVGNCQNKIVNSSQEAILSMVAQNYESSGTTTTKGIAVVSPLILSDVKTLSVRGATPEALPEAVYPVIEEGSVCSLQNKLVEDTASKITVNEPVTSTTSSKVFPLIQKEKHEPMNANSEGTPHASQGKQNRSEPDTQYPMRDQQASCISKDSDAVSSDVLQIGDICSLVEGDTSYNSQIAKIFNLSPLNKVEPQKPSLPNPQGTNSSQQNEQLDNITENKDFGFQDIVPCTDVSRKITDQSQSLQPSESSSLKYVEAKSGILEESSLEHVAKNEGMADDTCSSAAVQQDSCPQEGDVSCTYTDQDPTRNEILSDKTPILYLHDQLSELLKEFPYGIEPVNLHEGSVVQQTTDQISKAQACDKTGCNSKDSTDQIQITILNLEQMKELFPEQDDQLTEPQEEKPVPKDRKQCDPQARTVEESCESVAVDSEKDDVRCCALGWLSMVYEGVPQCQCSSSENSASKEEGKGPCSPLETSSYKQGQRTDRCDPVAFNKPPSNNPETPVNLPVEKKHVPETEQGKNVEDKSKAKPNSSLRTEQELSGPLLSKADKKLDSSLQSHKRRKRLQFHEITFHSTSKITKFSQEGLQRKLMAQSLRPLKPKMGFLTSKNKDLHMKNGSLVPSVSPEKRKLKAGGSKQKVLEKRKLDEGSVLDSEMKRKKNDKPERGKHVGGGSFKFRSLFSTPSERARIKEKTAPNVTSPGSKDSSSKIHRVLAPKEYLSRQTLIEAGPSGKALKKSYAKSATCDSQHVRPGKLSVRVGSCEKSNSSLQTAKESFNICTSRGKTLKIHHSKESKTYISRNSKGTVGGKQPDKMWIDKTKLDKNLNNANSDVEFSQMSSQAKDQRKLYLNRVAFKCTERERICLTKLDNSPRKLNKEKRPEGKPKSLVPVKDAAEKLSMLEFKLCPEGLFSKNTNPVEDQKDLQPCPRKEQAPVQGIKSTKEDWLKCVTEEKRMPEANQEIDDNVLAHSRLAKGSFSADGFETLQNPVKDSKAMFQTYKKMYMEKRSRSLGSSPLE
SIO_010081: RESF1
subclass of: SO_0000673
so part of: RESF1
location: complement(join(1425897..1426063,1428646..1428723,1430001..1434972))
location: region:1425897-1434972:-1
so has part: feature:1430001-1434972:-1:exon
so has part: feature:1428646-1428723:-1:exon
so has part: feature:1425897-1426063:-1:exon

XP_032329228.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1430001-1434972:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1428646-1428723:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1425897-1426063:-1:exon

RESF1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 419612
gene: RESF1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: retroelement silencing factor 1 isoform X1
translation: MNWNAKPESVTLPPQYPKKQASFLEQALVNTLSMTSQSSLNHPGSNQEGCPFLSNSNPVSQPLLNIRNYKSQQMPISDMHGGTIVTSQTSVERIIHANVKGPKQRSHDLHMPSGVTQDVWLNSPMRNSMLSHTGATVSHQTGFGTNMPNVHALQNQFVTSDTYSMQIHMIPSNSGRVPVTYQGNPRLNPPLPEQQVDWSQQCASSGLPYPDYRPLPKQYSYSPRSFLQDPPFQEQNPMSSVSLQVKKSHPPNPALTLQSKQTATVPSYQYAVTQTDKRPPPPPYDCRYASRPLQRTQHVVKVPSMEVPHSQDVHLPEMRKEFFKGFQQQWQNVNESFSMMGNPCNLRGNSNVSQPFDEPVRSSVDGVQALAQSNQEERMNSRNLTSNQVLDTSATKEKLVRDIKTLVEIKKKFSDLARKIKINKNLLMAAGCIKTTNTPYGESAQNSELSLKQTVKIQPGPQVTLVTPQTAENKPPTVMGSAEETNRIHSTLNSTLQDRNFNQVSSVLLNSACSEKLPIPEGLHDLKVVSSLKTSAVEITQATLNNTQFSSGNFVNIAQNGPTNSETASLPQSTSFEEYASKYPNKNRLILSLLAPGDKTLKTLLKDTNETIQDSKLHSFEINPNAQNTGDQLNLKTMETPSTCNINAKISDSSSCFQLKSLNELSSKSDHHFSTELLATCLSLWKKQPSELTEGKPCNESKANRTAVGLSKPVETCEKSPLPAVGNCQNKIVNSSQEAILSMVAQNYESSGTTTTKGIAVVSPLILSDVKTLSVRGATPEALPEAVYPVIEEGSVCSLQNKLVEDTASKITVNEPVTSTTSSKVFPLIQKEKHEPMNANSEGTPHASQGKQNRSEPDTQYPMRDQQASCISKDSDAVSSDVLQIGDICSLVEGDTSYNSQIAKIFNLSPLNKVEPQKPSLPNPQGTNSSQQNEQLDNITENKDFGFQDIVPCTDVSRKITDQSQSLQPSESSSLKYVEAKSGILEESSLEHVAKNEGMADDTCSSAAVQQDSCPQEGDVSCTYTDQDPTRNEILSDKTPILYLHDQLSELLKEFPYGIEPVNLHEGSVVQQTTDQISKAQACDKTGCNSKDSTDQIQITILNLEQMKELFPEQDDQLTEPQEEKPVPKDRKQCDPQARTVEESCESVAVDSEKDDVRCCALGWLSMVYEGVPQCQCSSSENSASKEEGKGPCSPLETSSYKQGQRTDRCDPVAFNKPPSNNPETPVNLPVEKKHVPETEQGKNVEDKSKAKPNSSLRTEQELSGPLLSKADKKLDSSLQSHKRRKRLQFHEITFHSTSKITKFSQEGLQRKLMAQSLRPLKPKMGFLTSKNKDLHMKNGSLVPSVSPEKRKLKAGGSKQKVLEKRKLDEGSVLDSEMKRKKNDKPERGKHVGGGSFKFRSLFSTPSERARIKEKTAPNVTSPGSKDSSSKIHRVLAPKEYLSRQTLIEAGPSGKALKKSYAKSATCDSQHVRPGKLSVRVGSCEKSNSSLQTAKESFNICTSRGKTLKIHHSKESKTYISRNSKGTVGGKQPDKMWIDKTKLDKNLNNANSDVEFSQMSSQAKDQRKLYLNRVAFKCTERERICLTKLDNSPRKLNKEKRPEGKPKSLVPVKDAAEKLSMLEFKLCPEGLFSKNTNPVEDQKDLQPCPRKEQAPVQVSGIKSTKEDWLKCVTEEKRMPEANQEIDDNVLAHSRLAKGSFSADGFETLQNPVKDSKAMFQTYKKMYMEKRSRSLGSSPLE
SIO_010081: RESF1
subclass of: SO_0000673
so part of: RESF1
location: complement(join(1425897..1426063,1428646..1428729,1430001..1434972))
location: region:1425897-1434972:-1
so has part: feature:1430001-1434972:-1:exon
so has part: feature:1428646-1428729:-1:exon
so has part: feature:1425897-1426063:-1:exon

XP_032329224.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1430001-1434972:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1428646-1428729:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1425897-1426063:-1:exon

RESF1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 419612
gene: RESF1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: retroelement silencing factor 1 isoform X1
translation: MNWNAKPESVTLPPQYPKKQASFLEQALVNTLSMTSQSSLNHPGSNQEGCPFLSNSNPVSQPLLNIRNYKSQQMPISDMHGGTIVTSQTSVERIIHANVKGPKQRSHDLHMPSGVTQDVWLNSPMRNSMLSHTGATVSHQTGFGTNMPNVHALQNQFVTSDTYSMQIHMIPSNSGRVPVTYQGNPRLNPPLPEQQVDWSQQCASSGLPYPDYRPLPKQYSYSPRSFLQDPPFQEQNPMSSVSLQVKKSHPPNPALTLQSKQTATVPSYQYAVTQTDKRPPPPPYDCRYASRPLQRTQHVVKVPSMEVPHSQDVHLPEMRKEFFKGFQQQWQNVNESFSMMGNPCNLRGNSNVSQPFDEPVRSSVDGVQALAQSNQEERMNSRNLTSNQVLDTSATKEKLVRDIKTLVEIKKKFSDLARKIKINKNLLMAAGCIKTTNTPYGESAQNSELSLKQTVKIQPGPQVTLVTPQTAENKPPTVMGSAEETNRIHSTLNSTLQDRNFNQVSSVLLNSACSEKLPIPEGLHDLKVVSSLKTSAVEITQATLNNTQFSSGNFVNIAQNGPTNSETASLPQSTSFEEYASKYPNKNRLILSLLAPGDKTLKTLLKDTNETIQDSKLHSFEINPNAQNTGDQLNLKTMETPSTCNINAKISDSSSCFQLKSLNELSSKSDHHFSTELLATCLSLWKKQPSELTEGKPCNESKANRTAVGLSKPVETCEKSPLPAVGNCQNKIVNSSQEAILSMVAQNYESSGTTTTKGIAVVSPLILSDVKTLSVRGATPEALPEAVYPVIEEGSVCSLQNKLVEDTASKITVNEPVTSTTSSKVFPLIQKEKHEPMNANSEGTPHASQGKQNRSEPDTQYPMRDQQASCISKDSDAVSSDVLQIGDICSLVEGDTSYNSQIAKIFNLSPLNKVEPQKPSLPNPQGTNSSQQNEQLDNITENKDFGFQDIVPCTDVSRKITDQSQSLQPSESSSLKYVEAKSGILEESSLEHVAKNEGMADDTCSSAAVQQDSCPQEGDVSCTYTDQDPTRNEILSDKTPILYLHDQLSELLKEFPYGIEPVNLHEGSVVQQTTDQISKAQACDKTGCNSKDSTDQIQITILNLEQMKELFPEQDDQLTEPQEEKPVPKDRKQCDPQARTVEESCESVAVDSEKDDVRCCALGWLSMVYEGVPQCQCSSSENSASKEEGKGPCSPLETSSYKQGQRTDRCDPVAFNKPPSNNPETPVNLPVEKKHVPETEQGKNVEDKSKAKPNSSLRTEQELSGPLLSKADKKLDSSLQSHKRRKRLQFHEITFHSTSKITKFSQEGLQRKLMAQSLRPLKPKMGFLTSKNKDLHMKNGSLVPSVSPEKRKLKAGGSKQKVLEKRKLDEGSVLDSEMKRKKNDKPERGKHVGGGSFKFRSLFSTPSERARIKEKTAPNVTSPGSKDSSSKIHRVLAPKEYLSRQTLIEAGPSGKALKKSYAKSATCDSQHVRPGKLSVRVGSCEKSNSSLQTAKESFNICTSRGKTLKIHHSKESKTYISRNSKGTVGGKQPDKMWIDKTKLDKNLNNANSDVEFSQMSSQAKDQRKLYLNRVAFKCTERERICLTKLDNSPRKLNKEKRPEGKPKSLVPVKDAAEKLSMLEFKLCPEGLFSKNTNPVEDQKDLQPCPRKEQAPVQVSGIKSTKEDWLKCVTEEKRMPEANQEIDDNVLAHSRLAKGSFSADGFETLQNPVKDSKAMFQTYKKMYMEKRSRSLGSSPLE
SIO_010081: RESF1
subclass of: SO_0000673
so part of: RESF1
location: complement(join(1425897..1426063,1428646..1428729,1430001..1434972))
location: region:1425897-1434972:-1
so has part: feature:1430001-1434972:-1:exon
so has part: feature:1428646-1428729:-1:exon
so has part: feature:1425897-1426063:-1:exon

XP_032329225.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1430001-1434972:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1428646-1428729:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1425897-1426063:-1:exon

RESF1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 419612
gene: RESF1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: retroelement silencing factor 1 isoform X1
translation: MNWNAKPESVTLPPQYPKKQASFLEQALVNTLSMTSQSSLNHPGSNQEGCPFLSNSNPVSQPLLNIRNYKSQQMPISDMHGGTIVTSQTSVERIIHANVKGPKQRSHDLHMPSGVTQDVWLNSPMRNSMLSHTGATVSHQTGFGTNMPNVHALQNQFVTSDTYSMQIHMIPSNSGRVPVTYQGNPRLNPPLPEQQVDWSQQCASSGLPYPDYRPLPKQYSYSPRSFLQDPPFQEQNPMSSVSLQVKKSHPPNPALTLQSKQTATVPSYQYAVTQTDKRPPPPPYDCRYASRPLQRTQHVVKVPSMEVPHSQDVHLPEMRKEFFKGFQQQWQNVNESFSMMGNPCNLRGNSNVSQPFDEPVRSSVDGVQALAQSNQEERMNSRNLTSNQVLDTSATKEKLVRDIKTLVEIKKKFSDLARKIKINKNLLMAAGCIKTTNTPYGESAQNSELSLKQTVKIQPGPQVTLVTPQTAENKPPTVMGSAEETNRIHSTLNSTLQDRNFNQVSSVLLNSACSEKLPIPEGLHDLKVVSSLKTSAVEITQATLNNTQFSSGNFVNIAQNGPTNSETASLPQSTSFEEYASKYPNKNRLILSLLAPGDKTLKTLLKDTNETIQDSKLHSFEINPNAQNTGDQLNLKTMETPSTCNINAKISDSSSCFQLKSLNELSSKSDHHFSTELLATCLSLWKKQPSELTEGKPCNESKANRTAVGLSKPVETCEKSPLPAVGNCQNKIVNSSQEAILSMVAQNYESSGTTTTKGIAVVSPLILSDVKTLSVRGATPEALPEAVYPVIEEGSVCSLQNKLVEDTASKITVNEPVTSTTSSKVFPLIQKEKHEPMNANSEGTPHASQGKQNRSEPDTQYPMRDQQASCISKDSDAVSSDVLQIGDICSLVEGDTSYNSQIAKIFNLSPLNKVEPQKPSLPNPQGTNSSQQNEQLDNITENKDFGFQDIVPCTDVSRKITDQSQSLQPSESSSLKYVEAKSGILEESSLEHVAKNEGMADDTCSSAAVQQDSCPQEGDVSCTYTDQDPTRNEILSDKTPILYLHDQLSELLKEFPYGIEPVNLHEGSVVQQTTDQISKAQACDKTGCNSKDSTDQIQITILNLEQMKELFPEQDDQLTEPQEEKPVPKDRKQCDPQARTVEESCESVAVDSEKDDVRCCALGWLSMVYEGVPQCQCSSSENSASKEEGKGPCSPLETSSYKQGQRTDRCDPVAFNKPPSNNPETPVNLPVEKKHVPETEQGKNVEDKSKAKPNSSLRTEQELSGPLLSKADKKLDSSLQSHKRRKRLQFHEITFHSTSKITKFSQEGLQRKLMAQSLRPLKPKMGFLTSKNKDLHMKNGSLVPSVSPEKRKLKAGGSKQKVLEKRKLDEGSVLDSEMKRKKNDKPERGKHVGGGSFKFRSLFSTPSERARIKEKTAPNVTSPGSKDSSSKIHRVLAPKEYLSRQTLIEAGPSGKALKKSYAKSATCDSQHVRPGKLSVRVGSCEKSNSSLQTAKESFNICTSRGKTLKIHHSKESKTYISRNSKGTVGGKQPDKMWIDKTKLDKNLNNANSDVEFSQMSSQAKDQRKLYLNRVAFKCTERERICLTKLDNSPRKLNKEKRPEGKPKSLVPVKDAAEKLSMLEFKLCPEGLFSKNTNPVEDQKDLQPCPRKEQAPVQVSGIKSTKEDWLKCVTEEKRMPEANQEIDDNVLAHSRLAKGSFSADGFETLQNPVKDSKAMFQTYKKMYMEKRSRSLGSSPLE
SIO_010081: RESF1
subclass of: SO_0000673
so part of: RESF1
location: complement(join(1425897..1426063,1428646..1428729,1430001..1434972))
location: region:1425897-1434972:-1
so has part: feature:1430001-1434972:-1:exon
so has part: feature:1428646-1428729:-1:exon
so has part: feature:1425897-1426063:-1:exon

XP_032329226.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1430001-1434972:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1428646-1428729:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1425897-1426063:-1:exon

RESF1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 419612
gene: RESF1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: retroelement silencing factor 1 isoform X1
translation: MNWNAKPESVTLPPQYPKKQASFLEQALVNTLSMTSQSSLNHPGSNQEGCPFLSNSNPVSQPLLNIRNYKSQQMPISDMHGGTIVTSQTSVERIIHANVKGPKQRSHDLHMPSGVTQDVWLNSPMRNSMLSHTGATVSHQTGFGTNMPNVHALQNQFVTSDTYSMQIHMIPSNSGRVPVTYQGNPRLNPPLPEQQVDWSQQCASSGLPYPDYRPLPKQYSYSPRSFLQDPPFQEQNPMSSVSLQVKKSHPPNPALTLQSKQTATVPSYQYAVTQTDKRPPPPPYDCRYASRPLQRTQHVVKVPSMEVPHSQDVHLPEMRKEFFKGFQQQWQNVNESFSMMGNPCNLRGNSNVSQPFDEPVRSSVDGVQALAQSNQEERMNSRNLTSNQVLDTSATKEKLVRDIKTLVEIKKKFSDLARKIKINKNLLMAAGCIKTTNTPYGESAQNSELSLKQTVKIQPGPQVTLVTPQTAENKPPTVMGSAEETNRIHSTLNSTLQDRNFNQVSSVLLNSACSEKLPIPEGLHDLKVVSSLKTSAVEITQATLNNTQFSSGNFVNIAQNGPTNSETASLPQSTSFEEYASKYPNKNRLILSLLAPGDKTLKTLLKDTNETIQDSKLHSFEINPNAQNTGDQLNLKTMETPSTCNINAKISDSSSCFQLKSLNELSSKSDHHFSTELLATCLSLWKKQPSELTEGKPCNESKANRTAVGLSKPVETCEKSPLPAVGNCQNKIVNSSQEAILSMVAQNYESSGTTTTKGIAVVSPLILSDVKTLSVRGATPEALPEAVYPVIEEGSVCSLQNKLVEDTASKITVNEPVTSTTSSKVFPLIQKEKHEPMNANSEGTPHASQGKQNRSEPDTQYPMRDQQASCISKDSDAVSSDVLQIGDICSLVEGDTSYNSQIAKIFNLSPLNKVEPQKPSLPNPQGTNSSQQNEQLDNITENKDFGFQDIVPCTDVSRKITDQSQSLQPSESSSLKYVEAKSGILEESSLEHVAKNEGMADDTCSSAAVQQDSCPQEGDVSCTYTDQDPTRNEILSDKTPILYLHDQLSELLKEFPYGIEPVNLHEGSVVQQTTDQISKAQACDKTGCNSKDSTDQIQITILNLEQMKELFPEQDDQLTEPQEEKPVPKDRKQCDPQARTVEESCESVAVDSEKDDVRCCALGWLSMVYEGVPQCQCSSSENSASKEEGKGPCSPLETSSYKQGQRTDRCDPVAFNKPPSNNPETPVNLPVEKKHVPETEQGKNVEDKSKAKPNSSLRTEQELSGPLLSKADKKLDSSLQSHKRRKRLQFHEITFHSTSKITKFSQEGLQRKLMAQSLRPLKPKMGFLTSKNKDLHMKNGSLVPSVSPEKRKLKAGGSKQKVLEKRKLDEGSVLDSEMKRKKNDKPERGKHVGGGSFKFRSLFSTPSERARIKEKTAPNVTSPGSKDSSSKIHRVLAPKEYLSRQTLIEAGPSGKALKKSYAKSATCDSQHVRPGKLSVRVGSCEKSNSSLQTAKESFNICTSRGKTLKIHHSKESKTYISRNSKGTVGGKQPDKMWIDKTKLDKNLNNANSDVEFSQMSSQAKDQRKLYLNRVAFKCTERERICLTKLDNSPRKLNKEKRPEGKPKSLVPVKDAAEKLSMLEFKLCPEGLFSKNTNPVEDQKDLQPCPRKEQAPVQVSGIKSTKEDWLKCVTEEKRMPEANQEIDDNVLAHSRLAKGSFSADGFETLQNPVKDSKAMFQTYKKMYMEKRSRSLGSSPLE
SIO_010081: RESF1
subclass of: SO_0000673
so part of: RESF1
location: complement(join(1425897..1426063,1428646..1428729,1430001..1434972))
location: region:1425897-1434972:-1
so has part: feature:1430001-1434972:-1:exon
so has part: feature:1428646-1428729:-1:exon
so has part: feature:1425897-1426063:-1:exon

XP_032329227.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1430001-1434972:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1428646-1428729:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1425897-1426063:-1:exon

RESF1
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 419612
gene: RESF1
product: retroelement silencing factor 1, transcript variant X7
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XR_004317235.1
SIO_010081: RESF1
so part of: RESF1
location: complement(join(1425999..1426063,1428646..1428783,1430001..1435029,1439646..1439711,1443057..1443105,1451114..1451205,1452462..1452594))
location: region:1425999-1452594:-1
so has part: feature:1452462-1452594:-1:exon
so has part: feature:1451114-1451205:-1:exon
so has part: feature:1443057-1443105:-1:exon
so has part: feature:1439646-1439711:-1:exon
so has part: feature:1430001-1435029:-1:exon
so has part: feature:1428646-1428783:-1:exon
so has part: feature:1425999-1426063:-1:exon

position:1425999:-1
position: 1425999
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1452462-1452594:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1451114-1451205:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1443057-1443105:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1439646-1439711:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1430001-1435029:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1428646-1428783:-1:exon

position:1428783:-1
position: 1428783
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1425999-1426063:-1:exon

LOC116661313
type: Gene
subclass of: SO_0000704
RO_0002162: 419612
gene: LOC116661313
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1474850..1484706
location: region:1474850-1484706:1
so has part: feature:1474850-1484706:1:exon
subclass of: SO_0000011

116661313
type: Gene
SIO_000068: ncbigene

position:1474850:1
position: 1474850
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1484706:1
position: 1484706
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1474850-1484706:1:exon

LOC116661313
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 419612
nc RNA class: lncRNA
gene: LOC116661313
product: uncharacterized LOC116661313
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XR_004317187.1
SIO_010081: LOC116661313
subclass of: SO_0000673
so part of: LOC116661313
location: join(1474850..1474975,1484620..1484623,1484697..1484706)
location: region:1474850-1484706:1
so has part: feature:1474850-1474975:1:exon
so has part: feature:1484620-1484623:1:exon
so has part: feature:1484697-1484706:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1474850-1474975:1:exon

position:1474975:1
position: 1474975
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1484620-1484623:1:exon

position:1484620:1
position: 1484620
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1484623:1
position: 1484623
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1484697-1484706:1:exon

position:1484697:1
position: 1484697
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

TRNAT-GGU
type: Gene
subclass of: SO_0000704
RO_0002162: 419612
gene: TRNAT-GGU
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
so part of: sequence
location: 1508878..1508949
location: region:1508878-1508949:1
so has part: feature:1508878-1508949:1:exon
subclass of: SO_0000663

116661417
type: Gene
SIO_000068: ncbigene

position:1508878:1
position: 1508878
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1508949:1
position: 1508949
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1508878-1508949:1:exon

TRNAT-GGU
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 419612
gene: TRNAT-GGU
product: tRNA-Thr
inference: COORDINATES: profile:tRNAscan-SE:1.23
note: transfer RNA threonine (anticodon GGU); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:1508910..1508912,aa:Thr,seq:ggt)
SIO_010081: TRNAT-GGU
subclass of: SO_0000673
so part of: TRNAT-GGU
location: 1508878..1508949
location: region:1508878-1508949:1
so has part: feature:1508878-1508949:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1508878-1508949:1:exon

LOC116661380
type: Gene
subclass of: SO_0000704
RO_0002162: 419612
gene: LOC116661380
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1630954..1634473)
location: region:1630954-1634473:-1
so has part: feature:1630954-1634473:-1:exon
subclass of: SO_0000011

116661380
type: Gene
SIO_000068: ncbigene

position:1630954:-1
position: 1630954
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1634473:-1
position: 1634473
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1630954-1634473:-1:exon

LOC116661380
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 419612
nc RNA class: lncRNA
gene: LOC116661380
product: uncharacterized LOC116661380
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 36 samples with support for all annotated introns
transcript id: XR_004317270.1
SIO_010081: LOC116661380
subclass of: SO_0000673
so part of: LOC116661380
location: complement(join(1630954..1631156,1634006..1634473))
location: region:1630954-1634473:-1
so has part: feature:1634006-1634473:-1:exon
so has part: feature:1630954-1631156:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1634006-1634473:-1:exon

position:1634006:-1
position: 1634006
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1630954-1631156:-1:exon

position:1631156:-1
position: 1631156
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

AMN1
type: Gene
subclass of: SO_0000704
RO_0002162: 419612
gene: AMN1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1634436..1671371
location: region:1634436-1671371:1
so has part: feature:1634436-1671371:1:exon
subclass of: SO_0000010

102507522
type: Gene
SIO_000068: ncbigene

position:1634436:1
position: 1634436
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1671371:1
position: 1671371
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1634436-1671371:1:exon

AMN1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 419612
gene: AMN1
product: antagonist of mitotic exit network 1 homolog, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 40 samples with support for all annotated introns
transcript id: XM_032473505.1
SIO_010081: AMN1
subclass of: SO_0000673
so part of: AMN1
location: join(1634436..1634592,1647456..1647588,1651405..1651549,1653024..1653241,1653560..1653616,1658656..1658767,1670056..1671371)
location: region:1634436-1671371:1
so has part: feature:1634436-1634592:1:exon
so has part: feature:1647456-1647588:1:exon
so has part: feature:1651405-1651549:1:exon
so has part: feature:1653024-1653241:1:exon
so has part: feature:1653560-1653616:1:exon
so has part: feature:1658656-1658767:1:exon
so has part: feature:1670056-1671371:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1634436-1634592:1:exon

position:1634592:1
position: 1634592
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1647456-1647588:1:exon

position:1647456:1
position: 1647456
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1647588:1
position: 1647588
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1651405-1651549:1:exon

position:1651405:1
position: 1651405
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1651549:1
position: 1651549
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1653024-1653241:1:exon

position:1653024:1
position: 1653024
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1653241:1
position: 1653241
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1653560-1653616:1:exon

position:1653560:1
position: 1653560
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1653616:1
position: 1653616
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1658656-1658767:1:exon

position:1658656:1
position: 1658656
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1658767:1
position: 1658767
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1670056-1671371:1:exon

position:1670056:1
position: 1670056
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

AMN1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 419612
gene: AMN1
product: antagonist of mitotic exit network 1 homolog, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 22 samples with support for all annotated introns
transcript id: XM_032473507.1
SIO_010081: AMN1
subclass of: SO_0000673
so part of: AMN1
location: join(1634459..1634572,1647456..1647588,1651405..1651549,1653024..1653241,1653560..1653616,1658656..1658767,1670056..1671371)
location: region:1634459-1671371:1
so has part: feature:1634459-1634572:1:exon
so has part: feature:1647456-1647588:1:exon
so has part: feature:1651405-1651549:1:exon
so has part: feature:1653024-1653241:1:exon
so has part: feature:1653560-1653616:1:exon
so has part: feature:1658656-1658767:1:exon
so has part: feature:1670056-1671371:1:exon

position:1634459:1
position: 1634459
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1634459-1634572:1:exon

position:1634572:1
position: 1634572
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1647456-1647588:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1651405-1651549:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1653024-1653241:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1653560-1653616:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1658656-1658767:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1670056-1671371:1:exon

AMN1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 419612
gene: AMN1
product: antagonist of mitotic exit network 1 homolog, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 32 samples with support for all annotated introns
transcript id: XM_032473506.1
SIO_010081: AMN1
subclass of: SO_0000673
so part of: AMN1
location: join(1634472..1634592,1640330..1640474,1647456..1647588,1651405..1651549,1653024..1653241,1653560..1653616,1658656..1658767,1670056..1671371)
location: region:1634472-1671371:1
so has part: feature:1634472-1634592:1:exon
so has part: feature:1640330-1640474:1:exon
so has part: feature:1647456-1647588:1:exon
so has part: feature:1651405-1651549:1:exon
so has part: feature:1653024-1653241:1:exon
so has part: feature:1653560-1653616:1:exon
so has part: feature:1658656-1658767:1:exon
so has part: feature:1670056-1671371:1:exon

position:1634472:1
position: 1634472
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1634472-1634592:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1640330-1640474:1:exon

position:1640330:1
position: 1640330
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1640474:1
position: 1640474
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1647456-1647588:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1651405-1651549:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1653024-1653241:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1653560-1653616:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1658656-1658767:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1670056-1671371:1:exon

AMN1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 419612
gene: AMN1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein AMN1 homolog isoform X1
translation: MPCQQRVSQLLDLCLWCFMKNISRYITDIKPLPPNIKDRLIKIMSVQGQITDSNISEILHPEVQSLDLRSCDVSDTALLHLCNCRKLKKLNLNASKGNRISVTSKGIKAVASSCSYLHEASLKRCCKVTDEGVLALALNCRLLKIIDLGGCLCITDVSLQALGENCAFLQCVDFSATQVSDNGVVALVSGPCAKKLEEIHMGHCVNLTDEAVEAVLTCCPQICILLFHGCPLITDHSREVLEQLVGPNKLKQVTWTVY
SIO_010081: AMN1
subclass of: SO_0000673
so part of: AMN1
location: join(1634555..1634592,1647456..1647588,1651405..1651549,1653024..1653241,1653560..1653616,1658656..1658767,1670056..1670129)
location: region:1634555-1670129:1
so has part: feature:1634555-1634592:1:exon
so has part: feature:1647456-1647588:1:exon
so has part: feature:1651405-1651549:1:exon
so has part: feature:1653024-1653241:1:exon
so has part: feature:1653560-1653616:1:exon
so has part: feature:1658656-1658767:1:exon
so has part: feature:1670056-1670129:1:exon

XP_032329396.1
type: Protein
SIO_000068: ncbiprotein

position:1634555:1
position: 1634555
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1670129:1
position: 1670129
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1634555-1634592:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1647456-1647588:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1651405-1651549:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1653024-1653241:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1653560-1653616:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1658656-1658767:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1670056-1670129:1:exon

AMN1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 419612
gene: AMN1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein AMN1 homolog isoform X2
translation: MKNISRYITDIKPLPPNIKDRLIKIMSVQGQITDSNISEILHPEVQSLDLRSCDVSDTALLHLCNCRKLKKLNLNASKGNRISVTSKGIKAVASSCSYLHEASLKRCCKVTDEGVLALALNCRLLKIIDLGGCLCITDVSLQALGENCAFLQCVDFSATQVSDNGVVALVSGPCAKKLEEIHMGHCVNLTDEAVEAVLTCCPQICILLFHGCPLITDHSREVLEQLVGPNKLKQVTWTVY
SIO_010081: AMN1
subclass of: SO_0000673
so part of: AMN1
location: join(1647472..1647588,1651405..1651549,1653024..1653241,1653560..1653616,1658656..1658767,1670056..1670129)
location: region:1647472-1670129:1
so has part: feature:1647472-1647588:1:exon
so has part: feature:1651405-1651549:1:exon
so has part: feature:1653024-1653241:1:exon
so has part: feature:1653560-1653616:1:exon
so has part: feature:1658656-1658767:1:exon
so has part: feature:1670056-1670129:1:exon

XP_032329397.1
type: Protein
SIO_000068: ncbiprotein

position:1647472:1
position: 1647472
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1647472-1647588:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1651405-1651549:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1653024-1653241:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1653560-1653616:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1658656-1658767:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1670056-1670129:1:exon

AMN1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 419612
gene: AMN1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein AMN1 homolog isoform X2
translation: MKNISRYITDIKPLPPNIKDRLIKIMSVQGQITDSNISEILHPEVQSLDLRSCDVSDTALLHLCNCRKLKKLNLNASKGNRISVTSKGIKAVASSCSYLHEASLKRCCKVTDEGVLALALNCRLLKIIDLGGCLCITDVSLQALGENCAFLQCVDFSATQVSDNGVVALVSGPCAKKLEEIHMGHCVNLTDEAVEAVLTCCPQICILLFHGCPLITDHSREVLEQLVGPNKLKQVTWTVY
SIO_010081: AMN1
subclass of: SO_0000673
so part of: AMN1
location: join(1647472..1647588,1651405..1651549,1653024..1653241,1653560..1653616,1658656..1658767,1670056..1670129)
location: region:1647472-1670129:1
so has part: feature:1647472-1647588:1:exon
so has part: feature:1651405-1651549:1:exon
so has part: feature:1653024-1653241:1:exon
so has part: feature:1653560-1653616:1:exon
so has part: feature:1658656-1658767:1:exon
so has part: feature:1670056-1670129:1:exon

XP_032329398.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1647472-1647588:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1651405-1651549:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1653024-1653241:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1653560-1653616:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1658656-1658767:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1670056-1670129:1:exon

ETFBKMT
type: Gene
subclass of: SO_0000704
RO_0002162: 419612
gene: ETFBKMT
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1671528..1678934)
location: region:1671528-1678934:-1
so has part: feature:1671528-1678934:-1:exon
subclass of: SO_0000010

102507245
type: Gene
SIO_000068: ncbigene

position:1671528:-1
position: 1671528
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1678934:-1
position: 1678934
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1671528-1678934:-1:exon

ETFBKMT
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 419612
gene: ETFBKMT
product: electron transfer flavoprotein subunit beta lysine methyltransferase, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 39 samples with support for all annotated introns
transcript id: XM_014568387.2
SIO_010081: ETFBKMT
subclass of: SO_0000673
so part of: ETFBKMT
location: complement(join(1671528..1673969,1674723..1674853,1676839..1677278,1678774..1678934))
location: region:1671528-1678934:-1
so has part: feature:1678774-1678934:-1:exon
so has part: feature:1676839-1677278:-1:exon
so has part: feature:1674723-1674853:-1:exon
so has part: feature:1671528-1673969:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1678774-1678934:-1:exon

position:1678774:-1
position: 1678774
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1676839-1677278:-1:exon

position:1676839:-1
position: 1676839
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1677278:-1
position: 1677278
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1674723-1674853:-1:exon

position:1674723:-1
position: 1674723
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1674853:-1
position: 1674853
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1671528-1673969:-1:exon

position:1673969:-1
position: 1673969
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

ETFBKMT
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 419612
gene: ETFBKMT
product: electron transfer flavoprotein subunit beta lysine methyltransferase, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_032473504.1
SIO_010081: ETFBKMT
subclass of: SO_0000673
so part of: ETFBKMT
location: complement(join(1671528..1673969,1674723..1674853,1676839..1677278,1677682..1677731,1678774..1678934))
location: region:1671528-1678934:-1
so has part: feature:1678774-1678934:-1:exon
so has part: feature:1677682-1677731:-1:exon
so has part: feature:1676839-1677278:-1:exon
so has part: feature:1674723-1674853:-1:exon
so has part: feature:1671528-1673969:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1678774-1678934:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1677682-1677731:-1:exon

position:1677682:-1
position: 1677682
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1677731:-1
position: 1677731
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1676839-1677278:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1674723-1674853:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1671528-1673969:-1:exon

ETFBKMT
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 419612
gene: ETFBKMT
product: electron transfer flavoprotein subunit beta lysine methyltransferase, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 16 samples with support for all annotated introns
transcript id: XM_014568388.2
SIO_010081: ETFBKMT
subclass of: SO_0000673
so part of: ETFBKMT
location: complement(join(1671528..1673969,1674723..1674853,1676839..1677278,1678011..1678766))
location: region:1671528-1678766:-1
so has part: feature:1678011-1678766:-1:exon
so has part: feature:1676839-1677278:-1:exon
so has part: feature:1674723-1674853:-1:exon
so has part: feature:1671528-1673969:-1:exon

position:1678766:-1
position: 1678766
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1678011-1678766:-1:exon

position:1678011:-1
position: 1678011
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1676839-1677278:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1674723-1674853:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1671528-1673969:-1:exon

ETFBKMT
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 419612
gene: ETFBKMT
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: electron transfer flavoprotein beta subunit lysine methyltransferase
translation: MALSPGWRAFAPFPVNCRGALQKAVRSSGLPLFPWGHCPWRGTGSFLDPEMKAFLEENTEVTSSGSLTPEIQLRLLTPRCKFWWERADLWPHSDPYWAIYWPGGQALSRYLLDNPGVVRGKSVLDVGSGCGATAIAAKMSGALRILANDIDPIAGMAITLNCELNRLNPFPILTKNILDLKQGKWDLVVLGDMFYDEDLADSLHQWLKNCFRAQRTRVLIGDPRRPQFSGHGIQRQLHKVVEYPLPEPTRRENNGLTTSTVWEFQP
SIO_010081: ETFBKMT
subclass of: SO_0000673
so part of: ETFBKMT
location: complement(join(1673626..1673969,1674723..1674853,1676839..1677164))
location: region:1673626-1677164:-1
so has part: feature:1676839-1677164:-1:exon
so has part: feature:1674723-1674853:-1:exon
so has part: feature:1673626-1673969:-1:exon

XP_014423873.2
type: Protein
SIO_000068: ncbiprotein

position:1673626:-1
position: 1673626
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1677164:-1
position: 1677164
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1676839-1677164:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1674723-1674853:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1673626-1673969:-1:exon

ETFBKMT
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 419612
gene: ETFBKMT
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: electron transfer flavoprotein beta subunit lysine methyltransferase
translation: MALSPGWRAFAPFPVNCRGALQKAVRSSGLPLFPWGHCPWRGTGSFLDPEMKAFLEENTEVTSSGSLTPEIQLRLLTPRCKFWWERADLWPHSDPYWAIYWPGGQALSRYLLDNPGVVRGKSVLDVGSGCGATAIAAKMSGALRILANDIDPIAGMAITLNCELNRLNPFPILTKNILDLKQGKWDLVVLGDMFYDEDLADSLHQWLKNCFRAQRTRVLIGDPRRPQFSGHGIQRQLHKVVEYPLPEPTRRENNGLTTSTVWEFQP
SIO_010081: ETFBKMT
subclass of: SO_0000673
so part of: ETFBKMT
location: complement(join(1673626..1673969,1674723..1674853,1676839..1677164))
location: region:1673626-1677164:-1
so has part: feature:1676839-1677164:-1:exon
so has part: feature:1674723-1674853:-1:exon
so has part: feature:1673626-1673969:-1:exon

XP_032329395.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1676839-1677164:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1674723-1674853:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1673626-1673969:-1:exon

ETFBKMT
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 419612
gene: ETFBKMT
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: electron transfer flavoprotein beta subunit lysine methyltransferase
translation: MALSPGWRAFAPFPVNCRGALQKAVRSSGLPLFPWGHCPWRGTGSFLDPEMKAFLEENTEVTSSGSLTPEIQLRLLTPRCKFWWERADLWPHSDPYWAIYWPGGQALSRYLLDNPGVVRGKSVLDVGSGCGATAIAAKMSGALRILANDIDPIAGMAITLNCELNRLNPFPILTKNILDLKQGKWDLVVLGDMFYDEDLADSLHQWLKNCFRAQRTRVLIGDPRRPQFSGHGIQRQLHKVVEYPLPEPTRRENNGLTTSTVWEFQP
SIO_010081: ETFBKMT
subclass of: SO_0000673
so part of: ETFBKMT
location: complement(join(1673626..1673969,1674723..1674853,1676839..1677164))
location: region:1673626-1677164:-1
so has part: feature:1676839-1677164:-1:exon
so has part: feature:1674723-1674853:-1:exon
so has part: feature:1673626-1673969:-1:exon

XP_014423874.2
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1676839-1677164:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1674723-1674853:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1673626-1673969:-1:exon

DENND5B
type: Gene
subclass of: SO_0000704
RO_0002162: 419612
gene: DENND5B
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1724100..1881246
location: region:1724100-1881246:1
so has part: feature:1724100-1881246:1:exon
subclass of: SO_0000010

102524508
type: Gene
SIO_000068: ncbigene

position:1724100:1
position: 1724100
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1881246:1
position: 1881246
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1724100-1881246:1:exon

DENND5B
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 419612
gene: DENND5B
product: DENN domain containing 5B, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 13 samples with support for all annotated introns
transcript id: XM_032473248.1
SIO_010081: DENND5B
subclass of: SO_0000673
so part of: DENND5B
location: join(1724100..1724532,1779752..1779817,1782911..1783020,1791726..1792392,1812699..1812886,1817940..1818476,1821199..1821430,1825542..1825692,1834436..1834529,1838903..1839034,1840262..1840414,1841292..1841370,1847084..1847165,1860469..1860597,1862375..1862496,1865189..1865334,1866930..1867048,1868147..1868334,1872441..1872523,1872898..1873024,1874669..1874843,1876377..1881246)
location: region:1724100-1881246:1
so has part: feature:1724100-1724532:1:exon
so has part: feature:1779752-1779817:1:exon
so has part: feature:1782911-1783020:1:exon
so has part: feature:1791726-1792392:1:exon
so has part: feature:1812699-1812886:1:exon
so has part: feature:1817940-1818476:1:exon
so has part: feature:1821199-1821430:1:exon
so has part: feature:1825542-1825692:1:exon
so has part: feature:1834436-1834529:1:exon
so has part: feature:1838903-1839034:1:exon
so has part: feature:1840262-1840414:1:exon
so has part: feature:1841292-1841370:1:exon
so has part: feature:1847084-1847165:1:exon
so has part: feature:1860469-1860597:1:exon
so has part: feature:1862375-1862496:1:exon
so has part: feature:1865189-1865334:1:exon
so has part: feature:1866930-1867048:1:exon
so has part: feature:1868147-1868334:1:exon
so has part: feature:1872441-1872523:1:exon
so has part: feature:1872898-1873024:1:exon
so has part: feature:1874669-1874843:1:exon
so has part: feature:1876377-1881246:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1724100-1724532:1:exon

position:1724532:1
position: 1724532
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1779752-1779817:1:exon

position:1779752:1
position: 1779752
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1779817:1
position: 1779817
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1782911-1783020:1:exon

position:1782911:1
position: 1782911
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1783020:1
position: 1783020
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1791726-1792392:1:exon

position:1791726:1
position: 1791726
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1792392:1
position: 1792392
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1812699-1812886:1:exon

position:1812699:1
position: 1812699
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1812886:1
position: 1812886
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1817940-1818476:1:exon

position:1817940:1
position: 1817940
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1818476:1
position: 1818476
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1821199-1821430:1:exon

position:1821199:1
position: 1821199
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1821430:1
position: 1821430
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1825542-1825692:1:exon

position:1825542:1
position: 1825542
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1825692:1
position: 1825692
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1834436-1834529:1:exon

position:1834436:1
position: 1834436
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1834529:1
position: 1834529
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1838903-1839034:1:exon

position:1838903:1
position: 1838903
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1839034:1
position: 1839034
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1840262-1840414:1:exon

position:1840262:1
position: 1840262
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1840414:1
position: 1840414
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1841292-1841370:1:exon

position:1841292:1
position: 1841292
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1841370:1
position: 1841370
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1847084-1847165:1:exon

position:1847084:1
position: 1847084
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1847165:1
position: 1847165
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:1860469-1860597:1:exon

position:1860469:1
position: 1860469
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1860597:1
position: 1860597
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:1862375-1862496:1:exon

position:1862375:1
position: 1862375
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1862496:1
position: 1862496
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:1865189-1865334:1:exon

position:1865189:1
position: 1865189
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1865334:1
position: 1865334
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:1866930-1867048:1:exon

position:1866930:1
position: 1866930
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1867048:1
position: 1867048
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:1868147-1868334:1:exon

position:1868147:1
position: 1868147
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1868334:1
position: 1868334
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:1872441-1872523:1:exon

position:1872441:1
position: 1872441
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1872523:1
position: 1872523
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:1872898-1873024:1:exon

position:1872898:1
position: 1872898
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1873024:1
position: 1873024
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:1874669-1874843:1:exon

position:1874669:1
position: 1874669
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1874843:1
position: 1874843
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:1876377-1881246:1:exon

position:1876377:1
position: 1876377
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

DENND5B
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 419612
gene: DENND5B
product: DENN domain containing 5B, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 12 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 26 samples with support for all annotated introns
transcript id: XM_032473249.1
SIO_010081: DENND5B
subclass of: SO_0000673
so part of: DENND5B
location: join(1724100..1724532,1782911..1783020,1791726..1792392,1812699..1812886,1817940..1818476,1821199..1821430,1825542..1825692,1834436..1834529,1838903..1839034,1840262..1840414,1841292..1841370,1847084..1847165,1860469..1860597,1862375..1862496,1865189..1865334,1866930..1867048,1868147..1868334,1872441..1872523,1872898..1873024,1874669..1874843,1876377..1881246)
location: region:1724100-1881246:1
so has part: feature:1724100-1724532:1:exon
so has part: feature:1782911-1783020:1:exon
so has part: feature:1791726-1792392:1:exon
so has part: feature:1812699-1812886:1:exon
so has part: feature:1817940-1818476:1:exon
so has part: feature:1821199-1821430:1:exon
so has part: feature:1825542-1825692:1:exon
so has part: feature:1834436-1834529:1:exon
so has part: feature:1838903-1839034:1:exon
so has part: feature:1840262-1840414:1:exon
so has part: feature:1841292-1841370:1:exon
so has part: feature:1847084-1847165:1:exon
so has part: feature:1860469-1860597:1:exon
so has part: feature:1862375-1862496:1:exon
so has part: feature:1865189-1865334:1:exon
so has part: feature:1866930-1867048:1:exon
so has part: feature:1868147-1868334:1:exon
so has part: feature:1872441-1872523:1:exon
so has part: feature:1872898-1873024:1:exon
so has part: feature:1874669-1874843:1:exon
so has part: feature:1876377-1881246:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1724100-1724532:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1782911-1783020:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1791726-1792392:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1812699-1812886:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1817940-1818476:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1821199-1821430:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1825542-1825692:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1834436-1834529:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1838903-1839034:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1840262-1840414:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1841292-1841370:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1847084-1847165:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1860469-1860597:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1862375-1862496:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1865189-1865334:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1866930-1867048:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1868147-1868334:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1872441-1872523:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1872898-1873024:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1874669-1874843:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1876377-1881246:1:exon

DENND5B
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 419612
gene: DENND5B
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: DENN domain-containing protein 5B isoform X1
translation: MSGSGAAPGPGSGSSPAACRFAHYFVLCGIDADSGLEPDELAVLYQWLEADRHGKSQDATNTTSGENFDQSPLRRTFKSKVLAHYPQNIEWNPFDQDAVNMLCMPKGLSFRTQTDNKDPQFHSFIITREDGSRTYGFVLTFYEEVTSKQICTAMQTLYQMHNAEHYSSVYASSSCSMDSLASSADEGDTTSLLKLQRYNSYDISRDTLYVSKSICLITPLPFMQACKKFLIQLYKAVTSQQPPPLPLESYIHNILYEVPLPPPGRSLKFYGVYEPIICQRPGPSELPLSDYPLREAFELLGLENLVQVFTCVLLEMQILLYSQDYQRLMTVAEGITTLLFPFQWQHVYVPILPASLLHFLDAPVPYLMGLQSKEGTDRSKLELPQEANLCFVDIDNHFIELPEEFPQFPNKVDFIQELSEVLLQFGIPPEGSLHCSESATKLKNLVLKDLVNDKKNGNVPASSISVYELLRGNETIARLQALAQRTGVAVGQVDLSASLGEKEKDVKLQCEEAELRDYQLNVQLREVFANRFTQMFADYEAFVIQTAQDMESWLTNREQMQNFDKASFLSDQPEPYLPFLSRFIETQMFATFIDNKIMSQWEEKDPLLRVFDSRIEKIRLYNVRAPTLRTSMYQKCGTLKEAAQSIEQRLMKMDHTAIHPHLLDMKIGQGKYEQGFFPKLQSDVLATGPTNNNRWVSRSATAQRRKDRLRQHSEHVGLDNELREKYMQEARSLGKSLRQPKLSDLSPAVIAQTNWKFVEGLLKECRMKTKRMLVEKMGHEAVELGHGEANITGLEENTLIASLCDLLERIWSHGLQVKQGKSALWSHLIQFQDREEKQEHLAESPVALGPERRKSDSGVMLPTLRVSLIQDMRHVQNMSEIKTDVGRARAWIRLSLEKKLLSQHLKQLLSDQLLTKKLYKRYAFLRCEEEREQFLYHLLSLNAVDYFCFTSVFTTIMIPYRAVIIPIKKLSNAIITSNPWICVSGELGDTGVMQIPKNLLEMTFECQNLGKLTTVQIGHDNSGLLAKWLVDCVMVRNEITGHTYRFPCGRWLGKGIDDGSLERILIGELMASAPDEDLVKQCRTPPQQKSPTTARRLSVTSLTGRATKPNAGQIQEGIGEAVNNIVKHFHKPEKERGSLTVLLCGESGLVAALEQVFHHGFKSARIFHKNVFIWDFIERAVAYFETTDQILDNEDDVLIQKSSWKTFCHYVNAINTAPRSIGKDGKFQTLVCLGTRDRLLPQWIPLLAECPAITRMYEESALLRDRMTVNSLIRILQTIQDFTIVLEGSLIKGVDV
SIO_010081: DENND5B
subclass of: SO_0000673
so part of: DENND5B
location: join(1724406..1724532,1779752..1779817,1782911..1783020,1791726..1792392,1812699..1812886,1817940..1818476,1821199..1821430,1825542..1825692,1834436..1834529,1838903..1839034,1840262..1840414,1841292..1841370,1847084..1847165,1860469..1860597,1862375..1862496,1865189..1865334,1866930..1867048,1868147..1868334,1872441..1872523,1872898..1873024,1874669..1874843,1876377..1876560)
location: region:1724406-1876560:1
so has part: feature:1724406-1724532:1:exon
so has part: feature:1779752-1779817:1:exon
so has part: feature:1782911-1783020:1:exon
so has part: feature:1791726-1792392:1:exon
so has part: feature:1812699-1812886:1:exon
so has part: feature:1817940-1818476:1:exon
so has part: feature:1821199-1821430:1:exon
so has part: feature:1825542-1825692:1:exon
so has part: feature:1834436-1834529:1:exon
so has part: feature:1838903-1839034:1:exon
so has part: feature:1840262-1840414:1:exon
so has part: feature:1841292-1841370:1:exon
so has part: feature:1847084-1847165:1:exon
so has part: feature:1860469-1860597:1:exon
so has part: feature:1862375-1862496:1:exon
so has part: feature:1865189-1865334:1:exon
so has part: feature:1866930-1867048:1:exon
so has part: feature:1868147-1868334:1:exon
so has part: feature:1872441-1872523:1:exon
so has part: feature:1872898-1873024:1:exon
so has part: feature:1874669-1874843:1:exon
so has part: feature:1876377-1876560:1:exon

XP_032329139.1
type: Protein
SIO_000068: ncbiprotein

position:1724406:1
position: 1724406
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1876560:1
position: 1876560
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1724406-1724532:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1779752-1779817:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1782911-1783020:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1791726-1792392:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1812699-1812886:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1817940-1818476:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1821199-1821430:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1825542-1825692:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1834436-1834529:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1838903-1839034:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1840262-1840414:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1841292-1841370:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1847084-1847165:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1860469-1860597:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1862375-1862496:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1865189-1865334:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1866930-1867048:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1868147-1868334:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1872441-1872523:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1872898-1873024:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1874669-1874843:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1876377-1876560:1:exon

DENND5B
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 419612
gene: DENND5B
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: DENN domain-containing protein 5B isoform X2
translation: MSGSGAAPGPGSGSSPAACRFAHYFVLCGIDADSGLEPDELAGENFDQSPLRRTFKSKVLAHYPQNIEWNPFDQDAVNMLCMPKGLSFRTQTDNKDPQFHSFIITREDGSRTYGFVLTFYEEVTSKQICTAMQTLYQMHNAEHYSSVYASSSCSMDSLASSADEGDTTSLLKLQRYNSYDISRDTLYVSKSICLITPLPFMQACKKFLIQLYKAVTSQQPPPLPLESYIHNILYEVPLPPPGRSLKFYGVYEPIICQRPGPSELPLSDYPLREAFELLGLENLVQVFTCVLLEMQILLYSQDYQRLMTVAEGITTLLFPFQWQHVYVPILPASLLHFLDAPVPYLMGLQSKEGTDRSKLELPQEANLCFVDIDNHFIELPEEFPQFPNKVDFIQELSEVLLQFGIPPEGSLHCSESATKLKNLVLKDLVNDKKNGNVPASSISVYELLRGNETIARLQALAQRTGVAVGQVDLSASLGEKEKDVKLQCEEAELRDYQLNVQLREVFANRFTQMFADYEAFVIQTAQDMESWLTNREQMQNFDKASFLSDQPEPYLPFLSRFIETQMFATFIDNKIMSQWEEKDPLLRVFDSRIEKIRLYNVRAPTLRTSMYQKCGTLKEAAQSIEQRLMKMDHTAIHPHLLDMKIGQGKYEQGFFPKLQSDVLATGPTNNNRWVSRSATAQRRKDRLRQHSEHVGLDNELREKYMQEARSLGKSLRQPKLSDLSPAVIAQTNWKFVEGLLKECRMKTKRMLVEKMGHEAVELGHGEANITGLEENTLIASLCDLLERIWSHGLQVKQGKSALWSHLIQFQDREEKQEHLAESPVALGPERRKSDSGVMLPTLRVSLIQDMRHVQNMSEIKTDVGRARAWIRLSLEKKLLSQHLKQLLSDQLLTKKLYKRYAFLRCEEEREQFLYHLLSLNAVDYFCFTSVFTTIMIPYRAVIIPIKKLSNAIITSNPWICVSGELGDTGVMQIPKNLLEMTFECQNLGKLTTVQIGHDNSGLLAKWLVDCVMVRNEITGHTYRFPCGRWLGKGIDDGSLERILIGELMASAPDEDLVKQCRTPPQQKSPTTARRLSVTSLTGRATKPNAGQIQEGIGEAVNNIVKHFHKPEKERGSLTVLLCGESGLVAALEQVFHHGFKSARIFHKNVFIWDFIERAVAYFETTDQILDNEDDVLIQKSSWKTFCHYVNAINTAPRSIGKDGKFQTLVCLGTRDRLLPQWIPLLAECPAITRMYEESALLRDRMTVNSLIRILQTIQDFTIVLEGSLIKGVDV
SIO_010081: DENND5B
subclass of: SO_0000673
so part of: DENND5B
location: join(1724406..1724532,1782911..1783020,1791726..1792392,1812699..1812886,1817940..1818476,1821199..1821430,1825542..1825692,1834436..1834529,1838903..1839034,1840262..1840414,1841292..1841370,1847084..1847165,1860469..1860597,1862375..1862496,1865189..1865334,1866930..1867048,1868147..1868334,1872441..1872523,1872898..1873024,1874669..1874843,1876377..1876560)
location: region:1724406-1876560:1
so has part: feature:1724406-1724532:1:exon
so has part: feature:1782911-1783020:1:exon
so has part: feature:1791726-1792392:1:exon
so has part: feature:1812699-1812886:1:exon
so has part: feature:1817940-1818476:1:exon
so has part: feature:1821199-1821430:1:exon
so has part: feature:1825542-1825692:1:exon
so has part: feature:1834436-1834529:1:exon
so has part: feature:1838903-1839034:1:exon
so has part: feature:1840262-1840414:1:exon
so has part: feature:1841292-1841370:1:exon
so has part: feature:1847084-1847165:1:exon
so has part: feature:1860469-1860597:1:exon
so has part: feature:1862375-1862496:1:exon
so has part: feature:1865189-1865334:1:exon
so has part: feature:1866930-1867048:1:exon
so has part: feature:1868147-1868334:1:exon
so has part: feature:1872441-1872523:1:exon
so has part: feature:1872898-1873024:1:exon
so has part: feature:1874669-1874843:1:exon
so has part: feature:1876377-1876560:1:exon

XP_032329140.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1724406-1724532:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1782911-1783020:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1791726-1792392:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1812699-1812886:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1817940-1818476:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1821199-1821430:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1825542-1825692:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1834436-1834529:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1838903-1839034:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1840262-1840414:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1841292-1841370:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1847084-1847165:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1860469-1860597:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1862375-1862496:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1865189-1865334:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1866930-1867048:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1868147-1868334:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1872441-1872523:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1872898-1873024:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1874669-1874843:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1876377-1876560:1:exon

LOC116661342
type: Gene
subclass of: SO_0000704
RO_0002162: 419612
gene: LOC116661342
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1733260..1735509)
location: region:1733260-1735509:-1
so has part: feature:1733260-1735509:-1:exon
subclass of: SO_0000011

116661342
type: Gene
SIO_000068: ncbigene

position:1733260:-1
position: 1733260
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1735509:-1
position: 1735509
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1733260-1735509:-1:exon

LOC116661342
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 419612
nc RNA class: lncRNA
gene: LOC116661342
product: uncharacterized LOC116661342
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XR_004317224.1
SIO_010081: LOC116661342
subclass of: SO_0000673
so part of: LOC116661342
location: complement(join(1733260..1733927,1734490..1734595,1734702..1735509))
location: region:1733260-1735509:-1
so has part: feature:1734702-1735509:-1:exon
so has part: feature:1734490-1734595:-1:exon
so has part: feature:1733260-1733927:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1734702-1735509:-1:exon

position:1734702:-1
position: 1734702
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1734490-1734595:-1:exon

position:1734490:-1
position: 1734490
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1734595:-1
position: 1734595
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1733260-1733927:-1:exon

position:1733927:-1
position: 1733927
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC116661343
type: Gene
subclass of: SO_0000704
RO_0002162: 419612
gene: LOC116661343
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1741648..1745993)
location: region:1741648-1745993:-1
so has part: feature:1741648-1745993:-1:exon
subclass of: SO_0000011

116661343
type: Gene
SIO_000068: ncbigene

position:1741648:-1
position: 1741648
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1745993:-1
position: 1745993
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1741648-1745993:-1:exon

LOC116661343
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 419612
nc RNA class: lncRNA
gene: LOC116661343
product: uncharacterized LOC116661343
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XR_004317225.1
SIO_010081: LOC116661343
subclass of: SO_0000673
so part of: LOC116661343
location: complement(join(1741648..1741658,1742076..1742078,1745913..1745993))
location: region:1741648-1745993:-1
so has part: feature:1745913-1745993:-1:exon
so has part: feature:1742076-1742078:-1:exon
so has part: feature:1741648-1741658:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1745913-1745993:-1:exon

position:1745913:-1
position: 1745913
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1742076-1742078:-1:exon

position:1742076:-1
position: 1742076
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1742078:-1
position: 1742078
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1741648-1741658:-1:exon

position:1741658:-1
position: 1741658
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC106730911
type: Gene
subclass of: SO_0000704
RO_0002162: 419612
gene: LOC106730911
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: 1855832..1858695
location: region:1855832-1858695:1
so has part: feature:1855832-1858695:1:exon

106730911
type: Gene
SIO_000068: ncbigene

position:1855832:1
position: 1855832
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1858695:1
position: 1858695
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1855832-1858695:1:exon

LOC106730911
type: Exon
subclass of: SO_0000147
RO_0002162: 419612
gene: LOC106730911
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 15 Proteins, and 95% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC106730911
subclass of: SO_0000673
so part of: LOC106730911
location: 1855832..1858695
location: region:1855832-1858695:1
so has part: feature:1855832-1858695:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1855832-1858695:1:exon

SINHCAF
type: Gene
subclass of: SO_0000704
RO_0002162: 419612
gene: SINHCAF
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1933196..1960629
location: region:1933196-1960629:1
so has part: feature:1933196-1960629:1:exon
subclass of: SO_0000010

102503729
type: Gene
SIO_000068: ncbigene

position:1933196:1
position: 1933196
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1960629:1
position: 1960629
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1933196-1960629:1:exon

SINHCAF
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 419612
gene: SINHCAF
product: SIN3-HDAC complex associated factor, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 40 samples with support for all annotated introns
transcript id: XM_006194060.3
SIO_010081: SINHCAF
subclass of: SO_0000673
so part of: SINHCAF
location: join(1933196..1933334,1946633..1946780,1948321..1948420,1950149..1950275,1955283..1955433,1958510..1960629)
location: region:1933196-1960629:1
so has part: feature:1933196-1933334:1:exon
so has part: feature:1946633-1946780:1:exon
so has part: feature:1948321-1948420:1:exon
so has part: feature:1950149-1950275:1:exon
so has part: feature:1955283-1955433:1:exon
so has part: feature:1958510-1960629:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1933196-1933334:1:exon

position:1933334:1
position: 1933334
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1946633-1946780:1:exon

position:1946633:1
position: 1946633
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1946780:1
position: 1946780
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1948321-1948420:1:exon

position:1948321:1
position: 1948321
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1948420:1
position: 1948420
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1950149-1950275:1:exon

position:1950149:1
position: 1950149
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1950275:1
position: 1950275
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1955283-1955433:1:exon

position:1955283:1
position: 1955283
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1955433:1
position: 1955433
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1958510-1960629:1:exon

position:1958510:1
position: 1958510
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

SINHCAF
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 419612
gene: SINHCAF
product: SIN3-HDAC complex associated factor, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 13 samples with support for all annotated introns
transcript id: XM_032472854.1
SIO_010081: SINHCAF
subclass of: SO_0000673
so part of: SINHCAF
location: join(1934552..1934726,1946633..1946780,1948321..1948420,1950149..1950275,1955283..1955433,1958510..1960629)
location: region:1934552-1960629:1
so has part: feature:1934552-1934726:1:exon
so has part: feature:1946633-1946780:1:exon
so has part: feature:1948321-1948420:1:exon
so has part: feature:1950149-1950275:1:exon
so has part: feature:1955283-1955433:1:exon
so has part: feature:1958510-1960629:1:exon

position:1934552:1
position: 1934552
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1934552-1934726:1:exon

position:1934726:1
position: 1934726
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1946633-1946780:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1948321-1948420:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1950149-1950275:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1955283-1955433:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1958510-1960629:1:exon

SINHCAF
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 419612
gene: SINHCAF
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: SIN3-HDAC complex-associated factor isoform X2
translation: MLHVGSARLDRKQRAACADSCREGKMFGFHKPKMYRSIEGCCICRAKSSSSRFTDSKRYEKDFQSCFGLHETRSGDICNACVLLVKRWKKLPAGSKKNWNHVVDARAGPSLKTTLKPKKVKTLSGNRIKSNQISKLQKEFKRHNSDAHSTTSSASPAQSPCYSNQSDDGSDTEMASGSNRTPVFSFLDLTYWKRQKICCGIIYKGRFGEVLIDTHLFKPCCSNKKAAAEKPAGPGPEPLPISTQEW
SIO_010081: SINHCAF
subclass of: SO_0000673
so part of: SINHCAF
location: join(1934672..1934726,1946633..1946780,1948321..1948420,1950149..1950275,1955283..1955433,1958510..1958669)
location: region:1934672-1958669:1
so has part: feature:1934672-1934726:1:exon
so has part: feature:1946633-1946780:1:exon
so has part: feature:1948321-1948420:1:exon
so has part: feature:1950149-1950275:1:exon
so has part: feature:1955283-1955433:1:exon
so has part: feature:1958510-1958669:1:exon

XP_032328745.1
type: Protein
SIO_000068: ncbiprotein

position:1934672:1
position: 1934672
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1958669:1
position: 1958669
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1934672-1934726:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1946633-1946780:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1948321-1948420:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1950149-1950275:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1955283-1955433:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1958510-1958669:1:exon

SINHCAF
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 419612
gene: SINHCAF
product: SIN3-HDAC complex associated factor, transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 16 samples with support for all annotated introns
transcript id: XM_032472857.1
SIO_010081: SINHCAF
subclass of: SO_0000673
so part of: SINHCAF
location: join(1935055..1935570,1935783..1938528)
location: region:1935055-1938528:1
so has part: feature:1935055-1935570:1:exon
so has part: feature:1935783-1938528:1:exon

position:1935055:1
position: 1935055
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1938528:1
position: 1938528
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1935055-1935570:1:exon

position:1935570:1
position: 1935570
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1935783-1938528:1:exon

position:1935783:1
position: 1935783
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

SINHCAF
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 419612
gene: SINHCAF
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: SIN3-HDAC complex-associated factor isoform X3
translation: MFELRQGKAMRRNKPRQRGVREARPAGGAGPAGWAGAGPVVPAQVREAAAARDALPSRRPRPGGQPSAGTFLPPPAAAPGSSSVCRPGTSAAAAAAACPRGERRLGRPRRTGRDGEAFCCFRGNRRAPLPRRRAAARALEGPRPRRHPKNHRREVSGLPLSYKGTRKPRNDCLAGRGPCAR
SIO_010081: SINHCAF
subclass of: SO_0000673
so part of: SINHCAF
location: join(1935081..1935570,1935783..1935838)
location: region:1935081-1935838:1
so has part: feature:1935081-1935570:1:exon
so has part: feature:1935783-1935838:1:exon

XP_032328748.1
type: Protein
SIO_000068: ncbiprotein

position:1935081:1
position: 1935081
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1935838:1
position: 1935838
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1935081-1935570:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1935783-1935838:1:exon

SINHCAF
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 419612
gene: SINHCAF
product: SIN3-HDAC complex associated factor, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 16 samples with support for all annotated introns
transcript id: XM_032472853.1
SIO_010081: SINHCAF
subclass of: SO_0000673
so part of: SINHCAF
location: join(1935133..1935570,1946633..1946780,1948321..1948420,1950149..1950275,1955283..1955433,1958510..1960629)
location: region:1935133-1960629:1
so has part: feature:1935133-1935570:1:exon
so has part: feature:1946633-1946780:1:exon
so has part: feature:1948321-1948420:1:exon
so has part: feature:1950149-1950275:1:exon
so has part: feature:1955283-1955433:1:exon
so has part: feature:1958510-1960629:1:exon

position:1935133:1
position: 1935133
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1935133-1935570:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1946633-1946780:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1948321-1948420:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1950149-1950275:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1955283-1955433:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1958510-1960629:1:exon

SINHCAF
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 419612
gene: SINHCAF
product: SIN3-HDAC complex associated factor, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 29 samples with support for all annotated introns
transcript id: XM_032472855.1
SIO_010081: SINHCAF
subclass of: SO_0000673
so part of: SINHCAF
location: join(1935428..1935621,1946633..1946780,1948321..1948420,1950149..1950275,1955283..1955433,1958510..1960629)
location: region:1935428-1960629:1
so has part: feature:1935428-1935621:1:exon
so has part: feature:1946633-1946780:1:exon
so has part: feature:1948321-1948420:1:exon
so has part: feature:1950149-1950275:1:exon
so has part: feature:1955283-1955433:1:exon
so has part: feature:1958510-1960629:1:exon

position:1935428:1
position: 1935428
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1935428-1935621:1:exon

position:1935621:1
position: 1935621
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1946633-1946780:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1948321-1948420:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1950149-1950275:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1955283-1955433:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1958510-1960629:1:exon

SINHCAF
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 419612
gene: SINHCAF
product: SIN3-HDAC complex associated factor, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 29 samples with support for all annotated introns
transcript id: XM_032472856.1
SIO_010081: SINHCAF
subclass of: SO_0000673
so part of: SINHCAF
location: join(1935428..1935594,1946633..1946780,1948321..1948420,1950149..1950275,1955283..1955433,1958510..1960629)
location: region:1935428-1960629:1
so has part: feature:1935428-1935594:1:exon
so has part: feature:1946633-1946780:1:exon
so has part: feature:1948321-1948420:1:exon
so has part: feature:1950149-1950275:1:exon
so has part: feature:1955283-1955433:1:exon
so has part: feature:1958510-1960629:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1935428-1935594:1:exon

position:1935594:1
position: 1935594
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1946633-1946780:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1948321-1948420:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1950149-1950275:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1955283-1955433:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1958510-1960629:1:exon

SINHCAF
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 419612
gene: SINHCAF
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: SIN3-HDAC complex-associated factor isoform X1
translation: MFGFHKPKMYRSIEGCCICRAKSSSSRFTDSKRYEKDFQSCFGLHETRSGDICNACVLLVKRWKKLPAGSKKNWNHVVDARAGPSLKTTLKPKKVKTLSGNRIKSNQISKLQKEFKRHNSDAHSTTSSASPAQSPCYSNQSDDGSDTEMASGSNRTPVFSFLDLTYWKRQKICCGIIYKGRFGEVLIDTHLFKPCCSNKKAAAEKPAGPGPEPLPISTQEW
SIO_010081: SINHCAF
subclass of: SO_0000673
so part of: SINHCAF
location: join(1946653..1946780,1948321..1948420,1950149..1950275,1955283..1955433,1958510..1958669)
location: region:1946653-1958669:1
so has part: feature:1946653-1946780:1:exon
so has part: feature:1948321-1948420:1:exon
so has part: feature:1950149-1950275:1:exon
so has part: feature:1955283-1955433:1:exon
so has part: feature:1958510-1958669:1:exon

XP_032328744.1
type: Protein
SIO_000068: ncbiprotein

position:1946653:1
position: 1946653
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1946653-1946780:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1948321-1948420:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1950149-1950275:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1955283-1955433:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1958510-1958669:1:exon

SINHCAF
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 419612
gene: SINHCAF
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: SIN3-HDAC complex-associated factor isoform X1
translation: MFGFHKPKMYRSIEGCCICRAKSSSSRFTDSKRYEKDFQSCFGLHETRSGDICNACVLLVKRWKKLPAGSKKNWNHVVDARAGPSLKTTLKPKKVKTLSGNRIKSNQISKLQKEFKRHNSDAHSTTSSASPAQSPCYSNQSDDGSDTEMASGSNRTPVFSFLDLTYWKRQKICCGIIYKGRFGEVLIDTHLFKPCCSNKKAAAEKPAGPGPEPLPISTQEW
SIO_010081: SINHCAF
subclass of: SO_0000673
so part of: SINHCAF
location: join(1946653..1946780,1948321..1948420,1950149..1950275,1955283..1955433,1958510..1958669)
location: region:1946653-1958669:1
so has part: feature:1946653-1946780:1:exon
so has part: feature:1948321-1948420:1:exon
so has part: feature:1950149-1950275:1:exon
so has part: feature:1955283-1955433:1:exon
so has part: feature:1958510-1958669:1:exon

XP_032328746.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1946653-1946780:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1948321-1948420:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1950149-1950275:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1955283-1955433:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1958510-1958669:1:exon

SINHCAF
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 419612
gene: SINHCAF
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: SIN3-HDAC complex-associated factor isoform X1
translation: MFGFHKPKMYRSIEGCCICRAKSSSSRFTDSKRYEKDFQSCFGLHETRSGDICNACVLLVKRWKKLPAGSKKNWNHVVDARAGPSLKTTLKPKKVKTLSGNRIKSNQISKLQKEFKRHNSDAHSTTSSASPAQSPCYSNQSDDGSDTEMASGSNRTPVFSFLDLTYWKRQKICCGIIYKGRFGEVLIDTHLFKPCCSNKKAAAEKPAGPGPEPLPISTQEW
SIO_010081: SINHCAF
subclass of: SO_0000673
so part of: SINHCAF
location: join(1946653..1946780,1948321..1948420,1950149..1950275,1955283..1955433,1958510..1958669)
location: region:1946653-1958669:1
so has part: feature:1946653-1946780:1:exon
so has part: feature:1948321-1948420:1:exon
so has part: feature:1950149-1950275:1:exon
so has part: feature:1955283-1955433:1:exon
so has part: feature:1958510-1958669:1:exon

XP_032328747.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1946653-1946780:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1948321-1948420:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1950149-1950275:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1955283-1955433:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1958510-1958669:1:exon

SINHCAF
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 419612
gene: SINHCAF
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: SIN3-HDAC complex-associated factor isoform X1
translation: MFGFHKPKMYRSIEGCCICRAKSSSSRFTDSKRYEKDFQSCFGLHETRSGDICNACVLLVKRWKKLPAGSKKNWNHVVDARAGPSLKTTLKPKKVKTLSGNRIKSNQISKLQKEFKRHNSDAHSTTSSASPAQSPCYSNQSDDGSDTEMASGSNRTPVFSFLDLTYWKRQKICCGIIYKGRFGEVLIDTHLFKPCCSNKKAAAEKPAGPGPEPLPISTQEW
SIO_010081: SINHCAF
subclass of: SO_0000673
so part of: SINHCAF
location: join(1946653..1946780,1948321..1948420,1950149..1950275,1955283..1955433,1958510..1958669)
location: region:1946653-1958669:1
so has part: feature:1946653-1946780:1:exon
so has part: feature:1948321-1948420:1:exon
so has part: feature:1950149-1950275:1:exon
so has part: feature:1955283-1955433:1:exon
so has part: feature:1958510-1958669:1:exon

XP_006194122.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1946653-1946780:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1948321-1948420:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1950149-1950275:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1955283-1955433:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1958510-1958669:1:exon

CAPRIN2
type: Gene
subclass of: SO_0000704
RO_0002162: 419612
gene: CAPRIN2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2013238..2051783
location: region:2013238-2051783:1
so has part: feature:2013238-2051783:1:exon
subclass of: SO_0000010

102503977
type: Gene
SIO_000068: ncbigene

position:2013238:1
position: 2013238
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2051783:1
position: 2051783
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2013238-2051783:1:exon

CAPRIN2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 419612
gene: CAPRIN2
product: caprin family member 2, transcript variant X10
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 21 samples with support for all annotated introns
transcript id: XM_032473245.1
SIO_010081: CAPRIN2
subclass of: SO_0000673
so part of: CAPRIN2
location: join(2013238..2013443,2014533..2014798,2016794..2016856,2024897..2024983,2027305..2027543,2028734..2028816,2030865..2031032,2032057..2032100,2033015..2033692,2036277..2036399,2037630..2037711,2038791..2038846,2041609..2041713,2043024..2043170,2045270..2045438,2046785..2046967,2047703..2047803,2049687..2049750,2050815..2051036)
location: region:2013238-2051036:1
so has part: feature:2013238-2013443:1:exon
so has part: feature:2014533-2014798:1:exon
so has part: feature:2016794-2016856:1:exon
so has part: feature:2024897-2024983:1:exon
so has part: feature:2027305-2027543:1:exon
so has part: feature:2028734-2028816:1:exon
so has part: feature:2030865-2031032:1:exon
so has part: feature:2032057-2032100:1:exon
so has part: feature:2033015-2033692:1:exon
so has part: feature:2036277-2036399:1:exon
so has part: feature:2037630-2037711:1:exon
so has part: feature:2038791-2038846:1:exon
so has part: feature:2041609-2041713:1:exon
so has part: feature:2043024-2043170:1:exon
so has part: feature:2045270-2045438:1:exon
so has part: feature:2046785-2046967:1:exon
so has part: feature:2047703-2047803:1:exon
so has part: feature:2049687-2049750:1:exon
so has part: feature:2050815-2051036:1:exon

position:2051036:1
position: 2051036
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2013238-2013443:1:exon

position:2013443:1
position: 2013443
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2014533-2014798:1:exon

position:2014533:1
position: 2014533
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note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 29 samples with support for all annotated introns
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SIO_010081: CAPRIN2
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CAPRIN2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 419612
gene: CAPRIN2
product: caprin family member 2, transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 22 samples with support for all annotated introns
transcript id: XM_032473241.1
SIO_010081: CAPRIN2
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CAPRIN2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 419612
gene: CAPRIN2
product: caprin family member 2, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 31 samples with support for all annotated introns
transcript id: XM_032473235.1
SIO_010081: CAPRIN2
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CAPRIN2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 419612
gene: CAPRIN2
product: caprin family member 2, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 28 samples with support for all annotated introns
transcript id: XM_032473236.1
SIO_010081: CAPRIN2
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CAPRIN2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 419612
gene: CAPRIN2
product: caprin family member 2, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 28 samples with support for all annotated introns
transcript id: XM_032473238.1
SIO_010081: CAPRIN2
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so has part: feature:2047703-2047803:1:exon
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urn:…
SIO_000300: 1
SIO_000628: feature:2013300-2013443:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2014533-2014798:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2016794-2016856:1:exon

urn:…
SIO_000300: 4
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urn:…
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urn:…
SIO_000300: 6
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urn:…
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urn:…
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urn:…
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urn:…
SIO_000300: 10
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urn:…
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SIO_000628: feature:2037630-2037711:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2038791-2038846:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2041609-2041713:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2043024-2043170:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2045270-2045438:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2047703-2047803:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:2049687-2049750:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:2050859-2051783:1:exon

CAPRIN2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 419612
gene: CAPRIN2
product: caprin family member 2, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 24 samples with support for all annotated introns
transcript id: XM_032473237.1
SIO_010081: CAPRIN2
subclass of: SO_0000673
so part of: CAPRIN2
location: join(2013300..2013443,2014533..2014798,2016794..2016856,2024897..2024983,2027305..2027543,2028734..2028816,2030865..2031032,2032057..2032100,2033015..2033692,2036277..2036399,2037630..2037711,2038791..2038846,2043024..2043170,2045270..2045438,2046785..2046967,2047703..2047803,2049687..2049750,2050859..2051783)
location: region:2013300-2051783:1
so has part: feature:2013300-2013443:1:exon
so has part: feature:2014533-2014798:1:exon
so has part: feature:2016794-2016856:1:exon
so has part: feature:2024897-2024983:1:exon
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urn:…
SIO_000300: 1
SIO_000628: feature:2013300-2013443:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2014533-2014798:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2016794-2016856:1:exon

urn:…
SIO_000300: 4
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urn:…
SIO_000300: 5
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urn:…
SIO_000300: 6
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urn:…
SIO_000300: 7
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urn:…
SIO_000300: 8
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urn:…
SIO_000300: 9
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urn:…
SIO_000300: 10
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urn:…
SIO_000300: 11
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urn:…
SIO_000300: 12
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urn:…
SIO_000300: 15
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urn:…
SIO_000300: 16
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urn:…
SIO_000300: 17
SIO_000628: feature:2049687-2049750:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:2050859-2051783:1:exon

CAPRIN2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 419612
gene: CAPRIN2
product: caprin family member 2, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 25 samples with support for all annotated introns
transcript id: XM_032473239.1
SIO_010081: CAPRIN2
subclass of: SO_0000673
so part of: CAPRIN2
location: join(2013300..2013443,2014533..2014798,2016794..2016856,2024897..2024983,2027305..2027543,2028734..2028816,2030865..2031032,2032057..2032100,2033015..2033692,2036277..2036399,2037630..2037711,2038791..2038846,2045270..2045438,2046785..2046967,2047703..2047803,2049687..2049750,2050859..2051783)
location: region:2013300-2051783:1
so has part: feature:2013300-2013443:1:exon
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urn:…
SIO_000300: 1
SIO_000628: feature:2013300-2013443:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2014533-2014798:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2016794-2016856:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2024897-2024983:1:exon

urn:…
SIO_000300: 5
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urn:…
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urn:…
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urn:…
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urn:…
SIO_000300: 10
SIO_000628: feature:2036277-2036399:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2037630-2037711:1:exon

urn:…
SIO_000300: 12
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urn:…
SIO_000300: 13
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urn:…
SIO_000300: 14
SIO_000628: feature:2046785-2046967:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2047703-2047803:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2049687-2049750:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:2050859-2051783:1:exon

CAPRIN2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 419612
gene: CAPRIN2
product: caprin family member 2, transcript variant X7
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 27 samples with support for all annotated introns
transcript id: XM_032473242.1
SIO_010081: CAPRIN2
subclass of: SO_0000673
so part of: CAPRIN2
location: join(2013300..2013443,2014533..2014798,2016794..2016856,2024897..2024983,2027305..2027543,2028734..2028816,2030865..2031032,2032057..2032100,2033015..2033692,2036277..2036399,2037630..2037711,2038791..2038846,2041609..2041713,2043024..2043170,2045270..2045438,2046845..2046967,2047703..2047803,2049687..2049750,2050815..2051036)
location: region:2013300-2051036:1
so has part: feature:2013300-2013443:1:exon
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urn:…
SIO_000300: 1
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urn:…
SIO_000300: 2
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urn:…
SIO_000300: 3
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SIO_000300: 4
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SIO_000300: 5
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urn:…
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urn:…
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SIO_000628: feature:2037630-2037711:1:exon

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SIO_000628: feature:2043024-2043170:1:exon

urn:…
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urn:…
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SIO_000628: feature:2046845-2046967:1:exon

urn:…
SIO_000300: 17
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urn:…
SIO_000300: 18
SIO_000628: feature:2049687-2049750:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:2050815-2051036:1:exon

CAPRIN2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 419612
gene: CAPRIN2
product: caprin family member 2, transcript variant X8
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 11 samples with support for all annotated introns
transcript id: XM_032473243.1
SIO_010081: CAPRIN2
subclass of: SO_0000673
so part of: CAPRIN2
location: join(2013300..2013443,2014533..2014798,2016794..2016856,2024897..2024983,2027305..2027543,2028734..2028816,2030865..2031032,2032057..2032100,2033015..2033692,2036277..2036399,2037630..2037711,2038791..2038846,2041609..2041713,2043024..2043170,2045270..2045438,2046785..2046967,2047703..2047803,2049687..2049750,2050783..2050916)
location: region:2013300-2050916:1
so has part: feature:2013300-2013443:1:exon
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so has part: feature:2050783-2050916:1:exon

position:2050916:1
position: 2050916
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2013300-2013443:1:exon

urn:…
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SIO_000628: feature:2014533-2014798:1:exon

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urn:…
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SIO_000628: feature:2041609-2041713:1:exon

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SIO_000628: feature:2043024-2043170:1:exon

urn:…
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SIO_000628: feature:2045270-2045438:1:exon

urn:…
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SIO_000628: feature:2046785-2046967:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:2047703-2047803:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:2049687-2049750:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:2050783-2050916:1:exon

position:2050783:1
position: 2050783
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

CAPRIN2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 419612
gene: CAPRIN2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: caprin-2 isoform X6
translation: MVQLSPSPFGYQSPSGRSEEGKEGTMKSARPQVNHSHHGESQRALSPLQPALSSATSPSQAYETYIDNGLICLKHKIRNIEKKKLKLEDYKDRLKNGEHLNPDQLEAVEKYEEVLHNLEFAKELQKTFSGLSQDLLKAQKKAQRREHMLKLEAEKKKLRTVLQVQYVLQNLTQEHVQKDFRGGLNGAVYLPLKELDYLIKFSKLTCPERNESLSVEDQMEQSSLYFWDLLEGSEKAVVGTTYKHMKDLLSKLLNSGYFESIPVPKNAKEKEVSLEEEMLIKSEKKKQLLKTESVKESESLMELAQPEIQPQEFLNRRYMTEVDYSSKQDEEQPWEADYARKPNLPKCWDMLTEPDGQEKKQESFKSWEASVKHPEVSKPAGSLEQRKQEIPKLRSALQEEQRKQDVSKAKPTPSQWKQEAPKPKAGYSQEESKKQETPKPWPVQLQKDQDPKKQTPKSWAPSVQSEQNVTKSWTTPVCEDQDARQPETPKSWENNAESQKHPLPPQSQISPKSWGVATASLIPNDQLLPGKFNTEPKDVPKPMHQPVGSSSALPKDPVLRKEKLQDLMTQIQGTCNFMQESILDFDKPSSAIPSSQPPSATPGSPVASTEQNLSNQSDFLQEPLQAASSPVTCSSNACLVTTDQASSGSETEFMTSEAPEAAVPPSKQPPSLASPNPPMSKGSEQGFQSPPASSSSVTINTAPFQAMQTVFNVNAPLPPRKEQEIKEPPYSSGYNQSFTTASTQTPPQCQLPAIHVEQTVLSQETAASYPDGTIQVSNGSLAFYPAQTNVLPRPSQPFVSSRGSVRGCSRGGRLLTNSYRSPGGYKGFDTYRGPPSISNGNYSQLQFQAREYPGTPYTQRDNFQQCYKRGGTSGGPRANSRAGWSDSSQVSSPERDNETFNSGDSGQGDSRSMTPVDVPATNPAATILPVHVYPLPQQMRVAFSAARTSNLAPGTLDQPIVFDLLLNNLGETFDLQLGRFNCPVNGTYVFIFHMLKLAVNVPLYVNLMKNEEVLVSAYANDGAPDHETASNHAILQLFQGDQIWLRLHRGAIYGSSWKYSTFSGYLLYQD
SIO_010081: CAPRIN2
subclass of: SO_0000673
so part of: CAPRIN2
location: join(2014547..2014798,2016794..2016856,2024897..2024983,2027305..2027543,2028734..2028816,2030865..2031032,2032057..2032100,2033015..2033692,2036277..2036399,2037630..2037711,2038791..2038846,2041609..2041713,2043024..2043170,2045270..2045438,2046785..2046967,2047703..2047803,2049687..2049750,2050859..2051427)
location: region:2014547-2051427:1
so has part: feature:2014547-2014798:1:exon
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XP_032329132.1
type: Protein
SIO_000068: ncbiprotein

position:2014547:1
position: 2014547
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2051427:1
position: 2051427
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2014547-2014798:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2016794-2016856:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2024897-2024983:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2027305-2027543:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2028734-2028816:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2030865-2031032:1:exon

urn:…
SIO_000300: 7
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urn:…
SIO_000300: 8
SIO_000628: feature:2033015-2033692:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2036277-2036399:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2037630-2037711:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2038791-2038846:1:exon

urn:…
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SIO_000628: feature:2041609-2041713:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2043024-2043170:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2045270-2045438:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2046785-2046967:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2047703-2047803:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:2049687-2049750:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:2050859-2051427:1:exon

CAPRIN2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 419612
gene: CAPRIN2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: caprin-2 isoform X1
translation: MVQLSPSPFGYQSPSGRSEEGKEGTMKSARPQVNHSHHGESQRALSPLQPALSSATSPSQAYETYIDNGLICLKHKIRNIEKKKLKLEDYKDRLKNGEHLNPDQLEAVEKYEEVLHNLEFAKELQKTFSGLSQDLLKAQKKAQRREHMLKLEAEKKKLRTVLQVQYVLQNLTQEHVQKDFRGGLNGAVYLPLKELDYLIKFSKLTCPERNESLSVEDQMEQSSLYFWDLLEGSEKAVVGTTYKHMKDLLSKLLNSGYFESIPVPKNAKEKEVSLEEEMLIKSEKKKQLLKTESVKESESLMELAQPEIQPQEFLNRRYMTEVDYSSKQDEEQPWEADYARKPNLPKCWDMLTEPDGQEKKQESFKSWEASVKHPEVSKPAGSLEQRKQEIPKLRSALQEEQRKQDVSKAKPTPSQWKQEAPKPKAGYSQEESKKQETPKPWPVQLQKDQDPKKQTPKSWAPSVQSEQNVTKSWTTPVCEDQDARQPETPKSWENNAESQKHPLPPQSQISPKSWGVATASLIPNDQLLPGKFNTEPKDVPKPMHQPVGSSSALPKDPVLRKEKLQDLMTQIQGTCNFMQESILDFDKPSSAIPSSQPPSATPGSPVASTEQNLSNQSDFLQEPLQAASSPVTCSSNACLVTTDQASSGSETEFMTSEAPEAAVPPSKQPPSLASPNPPMSKGSEQGFQSPPASSSSVTINTAPFQAMQTVFNVNAPLPPRKEQEIKEPPYSSGYNQSFTTASTQTPPQCQLPAIHVEQTVLSQETASYPDGTIQVSNGSLAFYPAQTNVLPRPSQPFVSSRGSVRGCSRGGRLLTNSYRSPGGYKGFDTYRGPPSISNGNYSQLQFQAREYPGTPYTQRDNFQQCYKRGGTSGGPRANSRAGWSDSSQVSSPERDNETFNSGDSGQGDSRSMTPVDVPATNPAATILPVHVYPLPQQMRVAFSAARTSNLAPGTLDQPIVFDLLLNNLGETFDLQLGRFNCPVNGTYVFIFHMLKLAVNVPLYVNLMKNEEVLVSAYANDGAPDHETASNHAILQLFQGDQIWLRLHRGAIYGSSWKYSTFSGYLLYQD
SIO_010081: CAPRIN2
subclass of: SO_0000673
so part of: CAPRIN2
location: join(2014547..2014798,2016794..2016856,2024897..2024983,2027305..2027543,2028734..2028816,2030865..2031032,2032057..2032100,2033015..2033692,2036277..2036399,2037630..2037711,2038791..2038846,2041609..2041713,2043024..2043170,2045270..2045438,2046788..2046967,2047703..2047803,2049687..2049750,2050859..2051427)
location: region:2014547-2051427:1
so has part: feature:2014547-2014798:1:exon
so has part: feature:2016794-2016856:1:exon
so has part: feature:2024897-2024983:1:exon
so has part: feature:2027305-2027543:1:exon
so has part: feature:2028734-2028816:1:exon
so has part: feature:2030865-2031032:1:exon
so has part: feature:2032057-2032100:1:exon
so has part: feature:2033015-2033692:1:exon
so has part: feature:2036277-2036399:1:exon
so has part: feature:2037630-2037711:1:exon
so has part: feature:2038791-2038846:1:exon
so has part: feature:2041609-2041713:1:exon
so has part: feature:2043024-2043170:1:exon
so has part: feature:2045270-2045438:1:exon
so has part: feature:2046788-2046967:1:exon
so has part: feature:2047703-2047803:1:exon
so has part: feature:2049687-2049750:1:exon
so has part: feature:2050859-2051427:1:exon

XP_032329126.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2014547-2014798:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2016794-2016856:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2024897-2024983:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2027305-2027543:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2028734-2028816:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2030865-2031032:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2032057-2032100:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2033015-2033692:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2036277-2036399:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2037630-2037711:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2038791-2038846:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2041609-2041713:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2043024-2043170:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2045270-2045438:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2046788-2046967:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2047703-2047803:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:2049687-2049750:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:2050859-2051427:1:exon

CAPRIN2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 419612
gene: CAPRIN2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: caprin-2 isoform X2
translation: MVQLSPSPFGYQSPSGRSEEGKEGTMKSARPQVNHSHHGESQRALSPLQPALSSATSPSQAYETYIDNGLICLKHKIRNIEKKKLKLEDYKDRLKNGEHLNPDQLEAVEKYEEVLHNLEFAKELQKTFSGLSQDLLKAQKKAQRREHMLKLEAEKKKLRTVLQVQYVLQNLTQEHVQKDFRGGLNGAVYLPLKELDYLIKFSKLTCPERNESLSVEDQMEQSSLYFWDLLEGSEKAVVGTTYKHMKDLLSKLLNSGYFESIPVPKNAKEKEVSLEEEMLIKSEKKKQLLKTESVKESESLMELAQPEIQPQEFLNRRYMTEVDYSSKQDEEQPWEADYARKPNLPKCWDMLTEPDGQEKKQESFKSWEASVKHPEVSKPAGSLEQRKQEIPKLRSALQEEQRKQDVSKAKPTPSQWKQEAPKPKAGYSQEESKKQETPKPWPVQLQKDQDPKKQTPKSWAPSVQSEQNVTKSWTTPVCEDQDARQPETPKSWENNAESQKHPLPPQSQISPKSWGVATASLIPNDQLLPGKFNTEPKDVPKPMHQPVGSSSALPKDPVLRKEKLQDLMTQIQGTCNFMQESILDFDKPSSAIPSSQPPSATPGSPVASTEQNLSNQSDFLQEPLQAASSPVTCSSNACLVTTDQASSGSETEFMTSEAPEAAVPPSKQPPSLASPNPPMSKGSEQGFQSPPASSSSVTINTAPFQAMQTVFNVNAPLPPRKEQEIKEPPYSSGYNQSFTTASTQTPPQCQLPAIHVEQTVLSQETAQTNVLPRPSQPFVSSRGSVRGCSRGGRLLTNSYRSPGGYKGFDTYRGPPSISNGNYSQLQFQAREYPGTPYTQRDNFQQCYKRGGTSGGPRANSRAGWSDSSQVSSPERDNETFNSGDSGQGDSRSMTPVDVPATNPAATILPVHVYPLPQQMRVAFSAARTSNLAPGTLDQPIVFDLLLNNLGETFDLQLGRFNCPVNGTYVFIFHMLKLAVNVPLYVNLMKNEEVLVSAYANDGAPDHETASNHAILQLFQGDQIWLRLHRGAIYGSSWKYSTFSGYLLYQD
SIO_010081: CAPRIN2
subclass of: SO_0000673
so part of: CAPRIN2
location: join(2014547..2014798,2016794..2016856,2024897..2024983,2027305..2027543,2028734..2028816,2030865..2031032,2032057..2032100,2033015..2033692,2036277..2036399,2037630..2037711,2038791..2038846,2041609..2041713,2043024..2043170,2045270..2045438,2046845..2046967,2047703..2047803,2049687..2049750,2050859..2051427)
location: region:2014547-2051427:1
so has part: feature:2014547-2014798:1:exon
so has part: feature:2016794-2016856:1:exon
so has part: feature:2024897-2024983:1:exon
so has part: feature:2027305-2027543:1:exon
so has part: feature:2028734-2028816:1:exon
so has part: feature:2030865-2031032:1:exon
so has part: feature:2032057-2032100:1:exon
so has part: feature:2033015-2033692:1:exon
so has part: feature:2036277-2036399:1:exon
so has part: feature:2037630-2037711:1:exon
so has part: feature:2038791-2038846:1:exon
so has part: feature:2041609-2041713:1:exon
so has part: feature:2043024-2043170:1:exon
so has part: feature:2045270-2045438:1:exon
so has part: feature:2046845-2046967:1:exon
so has part: feature:2047703-2047803:1:exon
so has part: feature:2049687-2049750:1:exon
so has part: feature:2050859-2051427:1:exon

XP_032329127.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2014547-2014798:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2016794-2016856:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2024897-2024983:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2027305-2027543:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2028734-2028816:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2030865-2031032:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2032057-2032100:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2033015-2033692:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2036277-2036399:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2037630-2037711:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2038791-2038846:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2041609-2041713:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2043024-2043170:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2045270-2045438:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2046845-2046967:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2047703-2047803:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:2049687-2049750:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:2050859-2051427:1:exon

CAPRIN2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 419612
gene: CAPRIN2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: caprin-2 isoform X4
translation: MVQLSPSPFGYQSPSGRSEEGKEGTMKSARPQVNHSHHGESQRALSPLQPALSSATSPSQAYETYIDNGLICLKHKIRNIEKKKLKLEDYKDRLKNGEHLNPDQLEAVEKYEEVLHNLEFAKELQKTFSGLSQDLLKAQKKAQRREHMLKLEAEKKKLRTVLQVQYVLQNLTQEHVQKDFRGGLNGAVYLPLKELDYLIKFSKLTCPERNESLSVEDQMEQSSLYFWDLLEGSEKAVVGTTYKHMKDLLSKLLNSGYFESIPVPKNAKEKEVSLEEEMLIKSEKKKQLLKTESVKESESLMELAQPEIQPQEFLNRRYMTEVDYSSKQDEEQPWEADYARKPNLPKCWDMLTEPDGQEKKQESFKSWEASVKHPEVSKPAGSLEQRKQEIPKLRSALQEEQRKQDVSKAKPTPSQWKQEAPKPKAGYSQEESKKQETPKPWPVQLQKDQDPKKQTPKSWAPSVQSEQNVTKSWTTPVCEDQDARQPETPKSWENNAESQKHPLPPQSQISPKSWGVATASLIPNDQLLPGKFNTEPKDVPKPMHQPVGSSSALPKDPVLRKEKLQDLMTQIQGTCNFMQESILDFDKPSSAIPSSQPPSATPGSPVASTEQNLSNQSDFLQEPLQAASSPVTCSSNACLVTTDQASSGSETEFMTSEAPEAAVPPSKQPPSLASPNPPMSKGSEQGFQSPPASSSSVTINTAPFQAMQTVFNVNAPLPPRKEQEIKEPPYSSGYNQSFTTASTQTPPQCQLPAIHVEQTVLSQETGFDTYRGPPSISNGNYSQLQFQAREYPGTPYTQRDNFQQCYKRGGTSGGPRANSRAGWSDSSQVSSPERDNETFNSGDSGQGDSRSMTPVDVPATNPAATILPVHVYPLPQQMRVAFSAARTSNLAPGTLDQPIVFDLLLNNLGETFDLQLGRFNCPVNGTYVFIFHMLKLAVNVPLYVNLMKNEEVLVSAYANDGAPDHETASNHAILQLFQGDQIWLRLHRGAIYGSSWKYSTFSGYLLYQD
SIO_010081: CAPRIN2
subclass of: SO_0000673
so part of: CAPRIN2
location: join(2014547..2014798,2016794..2016856,2024897..2024983,2027305..2027543,2028734..2028816,2030865..2031032,2032057..2032100,2033015..2033692,2036277..2036399,2037630..2037711,2038791..2038846,2041609..2041713,2043024..2043170,2045270..2045438,2047703..2047803,2049687..2049750,2050859..2051427)
location: region:2014547-2051427:1
so has part: feature:2014547-2014798:1:exon
so has part: feature:2016794-2016856:1:exon
so has part: feature:2024897-2024983:1:exon
so has part: feature:2027305-2027543:1:exon
so has part: feature:2028734-2028816:1:exon
so has part: feature:2030865-2031032:1:exon
so has part: feature:2032057-2032100:1:exon
so has part: feature:2033015-2033692:1:exon
so has part: feature:2036277-2036399:1:exon
so has part: feature:2037630-2037711:1:exon
so has part: feature:2038791-2038846:1:exon
so has part: feature:2041609-2041713:1:exon
so has part: feature:2043024-2043170:1:exon
so has part: feature:2045270-2045438:1:exon
so has part: feature:2047703-2047803:1:exon
so has part: feature:2049687-2049750:1:exon
so has part: feature:2050859-2051427:1:exon

XP_032329129.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2014547-2014798:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2016794-2016856:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2024897-2024983:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2027305-2027543:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2028734-2028816:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2030865-2031032:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2032057-2032100:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2033015-2033692:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2036277-2036399:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2037630-2037711:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2038791-2038846:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2041609-2041713:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2043024-2043170:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2045270-2045438:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2047703-2047803:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2049687-2049750:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:2050859-2051427:1:exon

CAPRIN2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 419612
gene: CAPRIN2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: caprin-2 isoform X3
translation: MVQLSPSPFGYQSPSGRSEEGKEGTMKSARPQVNHSHHGESQRALSPLQPALSSATSPSQAYETYIDNGLICLKHKIRNIEKKKLKLEDYKDRLKNGEHLNPDQLEAVEKYEEVLHNLEFAKELQKTFSGLSQDLLKAQKKAQRREHMLKLEAEKKKLRTVLQVQYVLQNLTQEHVQKDFRGGLNGAVYLPLKELDYLIKFSKLTCPERNESLSVEDQMEQSSLYFWDLLEGSEKAVVGTTYKHMKDLLSKLLNSGYFESIPVPKNAKEKEVSLEEEMLIKSEKKKQLLKTESVKESESLMELAQPEIQPQEFLNRRYMTEVDYSSKQDEEQPWEADYARKPNLPKCWDMLTEPDGQEKKQESFKSWEASVKHPEVSKPAGSLEQRKQEIPKLRSALQEEQRKQDVSKAKPTPSQWKQEAPKPKAGYSQEESKKQETPKPWPVQLQKDQDPKKQTPKSWAPSVQSEQNVTKSWTTPVCEDQDARQPETPKSWENNAESQKHPLPPQSQISPKSWGVATASLIPNDQLLPGKFNTEPKDVPKPMHQPVGSSSALPKDPVLRKEKLQDLMTQIQGTCNFMQESILDFDKPSSAIPSSQPPSATPGSPVASTEQNLSNQSDFLQEPLQAAVPPSKQPPSLASPNPPMSKGSEQGFQSPPASSSSVTINTAPFQAMQTVFNVNAPLPPRKEQEIKEPPYSSGYNQSFTTASTQTPPQCQLPAIHVEQTVLSQETAASYPDGTIQVSNGSLAFYPAQTNVLPRPSQPFVSSRGSVRGCSRGGRLLTNSYRSPGGYKGFDTYRGPPSISNGNYSQLQFQAREYPGTPYTQRDNFQQCYKRGGTSGGPRANSRAGWSDSSQVSSPERDNETFNSGDSGQGDSRSMTPVDVPATNPAATILPVHVYPLPQQMRVAFSAARTSNLAPGTLDQPIVFDLLLNNLGETFDLQLGRFNCPVNGTYVFIFHMLKLAVNVPLYVNLMKNEEVLVSAYANDGAPDHETASNHAILQLFQGDQIWLRLHRGAIYGSSWKYSTFSGYLLYQD
SIO_010081: CAPRIN2
subclass of: SO_0000673
so part of: CAPRIN2
location: join(2014547..2014798,2016794..2016856,2024897..2024983,2027305..2027543,2028734..2028816,2030865..2031032,2032057..2032100,2033015..2033692,2036277..2036399,2037630..2037711,2038791..2038846,2043024..2043170,2045270..2045438,2046785..2046967,2047703..2047803,2049687..2049750,2050859..2051427)
location: region:2014547-2051427:1
so has part: feature:2014547-2014798:1:exon
so has part: feature:2016794-2016856:1:exon
so has part: feature:2024897-2024983:1:exon
so has part: feature:2027305-2027543:1:exon
so has part: feature:2028734-2028816:1:exon
so has part: feature:2030865-2031032:1:exon
so has part: feature:2032057-2032100:1:exon
so has part: feature:2033015-2033692:1:exon
so has part: feature:2036277-2036399:1:exon
so has part: feature:2037630-2037711:1:exon
so has part: feature:2038791-2038846:1:exon
so has part: feature:2043024-2043170:1:exon
so has part: feature:2045270-2045438:1:exon
so has part: feature:2046785-2046967:1:exon
so has part: feature:2047703-2047803:1:exon
so has part: feature:2049687-2049750:1:exon
so has part: feature:2050859-2051427:1:exon

XP_032329128.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2014547-2014798:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2016794-2016856:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2024897-2024983:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2027305-2027543:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2028734-2028816:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2030865-2031032:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2032057-2032100:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2033015-2033692:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2036277-2036399:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2037630-2037711:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2038791-2038846:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2043024-2043170:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2045270-2045438:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2046785-2046967:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2047703-2047803:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2049687-2049750:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:2050859-2051427:1:exon

CAPRIN2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 419612
gene: CAPRIN2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: caprin-2 isoform X5
translation: MVQLSPSPFGYQSPSGRSEEGKEGTMKSARPQVNHSHHGESQRALSPLQPALSSATSPSQAYETYIDNGLICLKHKIRNIEKKKLKLEDYKDRLKNGEHLNPDQLEAVEKYEEVLHNLEFAKELQKTFSGLSQDLLKAQKKAQRREHMLKLEAEKKKLRTVLQVQYVLQNLTQEHVQKDFRGGLNGAVYLPLKELDYLIKFSKLTCPERNESLSVEDQMEQSSLYFWDLLEGSEKAVVGTTYKHMKDLLSKLLNSGYFESIPVPKNAKEKEVSLEEEMLIKSEKKKQLLKTESVKESESLMELAQPEIQPQEFLNRRYMTEVDYSSKQDEEQPWEADYARKPNLPKCWDMLTEPDGQEKKQESFKSWEASVKHPEVSKPAGSLEQRKQEIPKLRSALQEEQRKQDVSKAKPTPSQWKQEAPKPKAGYSQEESKKQETPKPWPVQLQKDQDPKKQTPKSWAPSVQSEQNVTKSWTTPVCEDQDARQPETPKSWENNAESQKHPLPPQSQISPKSWGVATASLIPNDQLLPGKFNTEPKDVPKPMHQPVGSSSALPKDPVLRKEKLQDLMTQIQGTCNFMQESILDFDKPSSAIPSSQPPSATPGSPVASTEQNLSNQSDFLQEPLQVFNVNAPLPPRKEQEIKEPPYSSGYNQSFTTASTQTPPQCQLPAIHVEQTVLSQETAASYPDGTIQVSNGSLAFYPAQTNVLPRPSQPFVSSRGSVRGCSRGGRLLTNSYRSPGGYKGFDTYRGPPSISNGNYSQLQFQAREYPGTPYTQRDNFQQCYKRGGTSGGPRANSRAGWSDSSQVSSPERDNETFNSGDSGQGDSRSMTPVDVPATNPAATILPVHVYPLPQQMRVAFSAARTSNLAPGTLDQPIVFDLLLNNLGETFDLQLGRFNCPVNGTYVFIFHMLKLAVNVPLYVNLMKNEEVLVSAYANDGAPDHETASNHAILQLFQGDQIWLRLHRGAIYGSSWKYSTFSGYLLYQD
SIO_010081: CAPRIN2
subclass of: SO_0000673
so part of: CAPRIN2
location: join(2014547..2014798,2016794..2016856,2024897..2024983,2027305..2027543,2028734..2028816,2030865..2031032,2032057..2032100,2033015..2033692,2036277..2036399,2037630..2037711,2038791..2038846,2045270..2045438,2046785..2046967,2047703..2047803,2049687..2049750,2050859..2051427)
location: region:2014547-2051427:1
so has part: feature:2014547-2014798:1:exon
so has part: feature:2016794-2016856:1:exon
so has part: feature:2024897-2024983:1:exon
so has part: feature:2027305-2027543:1:exon
so has part: feature:2028734-2028816:1:exon
so has part: feature:2030865-2031032:1:exon
so has part: feature:2032057-2032100:1:exon
so has part: feature:2033015-2033692:1:exon
so has part: feature:2036277-2036399:1:exon
so has part: feature:2037630-2037711:1:exon
so has part: feature:2038791-2038846:1:exon
so has part: feature:2045270-2045438:1:exon
so has part: feature:2046785-2046967:1:exon
so has part: feature:2047703-2047803:1:exon
so has part: feature:2049687-2049750:1:exon
so has part: feature:2050859-2051427:1:exon

XP_032329130.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2014547-2014798:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2016794-2016856:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2024897-2024983:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2027305-2027543:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2028734-2028816:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2030865-2031032:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2032057-2032100:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2033015-2033692:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2036277-2036399:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2037630-2037711:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2038791-2038846:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2045270-2045438:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2046785-2046967:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2047703-2047803:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2049687-2049750:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2050859-2051427:1:exon

CAPRIN2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 419612
gene: CAPRIN2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: caprin-2 isoform X10
translation: MVQLSPSPFGYQSPSGRSEEGKEGTMKSARPQVNHSHHGESQRALSPLQPALSSATSPSQAYETYIDNGLICLKHKIRNIEKKKLKLEDYKDRLKNGEHLNPDQLEAVEKYEEVLHNLEFAKELQKTFSGLSQDLLKAQKKAQRREHMLKLEAEKKKLRTVLQVQYVLQNLTQEHVQKDFRGGLNGAVYLPLKELDYLIKFSKLTCPERNESLSVEDQMEQSSLYFWDLLEGSEKAVVGTTYKHMKDLLSKLLNSGYFESIPVPKNAKEKEVSLEEEMLIKSEKKKQLLKTESVKESESLMELAQPEIQPQEFLNRRYMTEVDYSSKQDEEQPWEADYARKPNLPKCWDMLTEPDGQEKKQESFKSWEASVKHPEVSKPAGSLEQRKQEIPKLRSALQEEQRKQDVSKAKPTPSQWKQEAPKPKAGYSQEESKKQETPKPWPVQLQKDQDPKKQTPKSWAPSVQSEQNVTKSWTTPVCEDQDARQPETPKSWENNAESQKHPLPPQSQISPKSWGVATASLIPNDQLLPGKFNTEPKDVPKPMHQPVGSSSALPKDPVLRKEKLQDLMTQIQGTCNFMQESILDFDKPSSAIPSSQPPSATPGSPVASTEQNLSNQSDFLQEPLQAASSPVTCSSNACLVTTDQASSGSETEFMTSEAPEAAVPPSKQPPSLASPNPPMSKGSEQGFQSPPASSSSVTINTAPFQAMQTVFNVNAPLPPRKEQEIKEPPYSSGYNQSFTTASTQTPPQCQLPAIHVEQTVLSQETAASYPDGTIQVSNGSLAFYPAQTNVLPRPSQPFVSSRGSVRGCSRGGRLLTNSYRSPGGYKGFDTYRGPPSISNGNYSQLQFQAREYPGTPYTQRDNFQQCYKRGGTSGGPRANSRANCFIMRNSLLLIKQQGGVILLR
SIO_010081: CAPRIN2
subclass of: SO_0000673
so part of: CAPRIN2
location: join(2014547..2014798,2016794..2016856,2024897..2024983,2027305..2027543,2028734..2028816,2030865..2031032,2032057..2032100,2033015..2033692,2036277..2036399,2037630..2037711,2038791..2038846,2041609..2041713,2043024..2043170,2045270..2045438,2046785..2046967,2047703..2047803,2049687..2049750,2050815..2050885)
location: region:2014547-2050885:1
so has part: feature:2014547-2014798:1:exon
so has part: feature:2016794-2016856:1:exon
so has part: feature:2024897-2024983:1:exon
so has part: feature:2027305-2027543:1:exon
so has part: feature:2028734-2028816:1:exon
so has part: feature:2030865-2031032:1:exon
so has part: feature:2032057-2032100:1:exon
so has part: feature:2033015-2033692:1:exon
so has part: feature:2036277-2036399:1:exon
so has part: feature:2037630-2037711:1:exon
so has part: feature:2038791-2038846:1:exon
so has part: feature:2041609-2041713:1:exon
so has part: feature:2043024-2043170:1:exon
so has part: feature:2045270-2045438:1:exon
so has part: feature:2046785-2046967:1:exon
so has part: feature:2047703-2047803:1:exon
so has part: feature:2049687-2049750:1:exon
so has part: feature:2050815-2050885:1:exon

XP_032329136.1
type: Protein
SIO_000068: ncbiprotein

position:2050885:1
position: 2050885
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2014547-2014798:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2016794-2016856:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2024897-2024983:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2027305-2027543:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2028734-2028816:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2030865-2031032:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2032057-2032100:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2033015-2033692:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2036277-2036399:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2037630-2037711:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2038791-2038846:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2041609-2041713:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2043024-2043170:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2045270-2045438:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2046785-2046967:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2047703-2047803:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:2049687-2049750:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:2050815-2050885:1:exon

CAPRIN2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 419612
gene: CAPRIN2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: caprin-2 isoform X7
translation: MVQLSPSPFGYQSPSGRSEEGKEGTMKSARPQVNHSHHGESQRALSPLQPALSSATSPSQAYETYIDNGLICLKHKIRNIEKKKLKLEDYKDRLKNGEHLNPDQLEAVEKYEEVLHNLEFAKELQKTFSGLSQDLLKAQKKAQRREHMLKLEAEKKKLRTVLQVQYVLQNLTQEHVQKDFRGGLNGAVYLPLKELDYLIKFSKLTCPERNESLSVEDQMEQSSLYFWDLLEGSEKAVVGTTYKHMKDLLSKLLNSGYFESIPVPKNAKEKEVSLEEEMLIKSEKKKQLLKTESVKESESLMELAQPEIQPQEFLNRRYMTEVDYSSKQDEEQPWEADYARKPNLPKCWDMLTEPDGQEKKQESFKSWEASVKHPEVSKPAGSLEQRKQEIPKLRSALQEEQRKQDVSKAKPTPSQWKQEAPKPKAGYSQEESKKQETPKPWPVQLQKDQDPKKQTPKSWAPSVQSEQNVTKSWTTPVCEDQDARQPETPKSWENNAESQKHPLPPQSQISPKSWGVATASLIPNDQLLPGKFNTEPKDVPKPMHQPVGSSSALPKDPVLRKEKLQDLMTQIQGTCNFMQESILDFDKPSSAIPSSQPPSATPGSPVASTEQNLSNQSDFLQEPLQAASSPVTCSSNACLVTTDQASSGSETEFMTSEAPEAAVPPSKQPPSLASPNPPMSKGSEQGFQSPPASSSSVTINTAPFQAMQTVFNVNAPLPPRKEQEIKEPPYSSGYNQSFTTASTQTPPQCQLPAIHVEQTVLSQETAQTNVLPRPSQPFVSSRGSVRGCSRGGRLLTNSYRSPGGYKGFDTYRGPPSISNGNYSQLQFQAREYPGTPYTQRDNFQQCYKRGGTSGGPRANSRANCFIMRNSLLLIKQQGGVILLR
SIO_010081: CAPRIN2
subclass of: SO_0000673
so part of: CAPRIN2
location: join(2014547..2014798,2016794..2016856,2024897..2024983,2027305..2027543,2028734..2028816,2030865..2031032,2032057..2032100,2033015..2033692,2036277..2036399,2037630..2037711,2038791..2038846,2041609..2041713,2043024..2043170,2045270..2045438,2046845..2046967,2047703..2047803,2049687..2049750,2050815..2050885)
location: region:2014547-2050885:1
so has part: feature:2014547-2014798:1:exon
so has part: feature:2016794-2016856:1:exon
so has part: feature:2024897-2024983:1:exon
so has part: feature:2027305-2027543:1:exon
so has part: feature:2028734-2028816:1:exon
so has part: feature:2030865-2031032:1:exon
so has part: feature:2032057-2032100:1:exon
so has part: feature:2033015-2033692:1:exon
so has part: feature:2036277-2036399:1:exon
so has part: feature:2037630-2037711:1:exon
so has part: feature:2038791-2038846:1:exon
so has part: feature:2041609-2041713:1:exon
so has part: feature:2043024-2043170:1:exon
so has part: feature:2045270-2045438:1:exon
so has part: feature:2046845-2046967:1:exon
so has part: feature:2047703-2047803:1:exon
so has part: feature:2049687-2049750:1:exon
so has part: feature:2050815-2050885:1:exon

XP_032329133.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2014547-2014798:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2016794-2016856:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2024897-2024983:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2027305-2027543:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2028734-2028816:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2030865-2031032:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2032057-2032100:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2033015-2033692:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2036277-2036399:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2037630-2037711:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2038791-2038846:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2041609-2041713:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2043024-2043170:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2045270-2045438:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2046845-2046967:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2047703-2047803:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:2049687-2049750:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:2050815-2050885:1:exon

CAPRIN2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 419612
gene: CAPRIN2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: caprin-2 isoform X11
translation: MVQLSPSPFGYQSPSGRSEEGKEGTMKSARPQVNHSHHGESQRALSPLQPALSSATSPSQAYETYIDNGLICLKHKIRNIEKKKLKLEDYKDRLKNGEHLNPDQLEAVEKYEEVLHNLEFAKELQKTFSGLSQDLLKAQKKAQRREHMLKLEAEKKKLRTVLQVQYVLQNLTQEHVQKDFRGGLNGAVYLPLKELDYLIKFSKLTCPERNESLSVEDQMEQSSLYFWDLLEGSEKAVVGTTYKHMKDLLSKLLNSGYFESIPVPKNAKEKEVSLEEEMLIKSEKKKQLLKTESVKESESLMELAQPEIQPQEFLNRRYMTEVDYSSKQDEEQPWEADYARKPNLPKCWDMLTEPDGQEKKQESFKSWEASVKHPEVSKPAGSLEQRKQEIPKLRSALQEEQRKQDVSKAKPTPSQWKQEAPKPKAGYSQEESKKQETPKPWPVQLQKDQDPKKQTPKSWAPSVQSEQNVTKSWTTPVCEDQDARQPETPKSWENNAESQKHPLPPQSQISPKSWGVATASLIPNDQLLPGKFNTEPKDVPKPMHQPVGSSSALPKDPVLRKEKLQDLMTQIQGTCNFMQESILDFDKPSSAIPSSQPPSATPGSPVASTEQNLSNQSDFLQEPLQAAVPPSKQPPSLASPNPPMSKGSEQGFQSPPASSSSVTINTAPFQAMQTVFNVNAPLPPRKEQEIKEPPYSSGYNQSFTTASTQTPPQCQLPAIHVEQTVLSQETAQTNVLPRPSQPFVSSRGSVRGCSRGGRLLTNSYRSPGGYKGFDTYRGPPSISNGNYSQLQFQAREYPGTPYTQRDNFQQCYKRGGTSGGPRANSRANCFIMRNSLLLIKQQGGVILLR
SIO_010081: CAPRIN2
subclass of: SO_0000673
so part of: CAPRIN2
location: join(2014547..2014798,2016794..2016856,2024897..2024983,2027305..2027543,2028734..2028816,2030865..2031032,2032057..2032100,2033015..2033692,2036277..2036399,2037630..2037711,2038791..2038846,2043024..2043170,2045270..2045438,2046845..2046967,2047703..2047803,2049687..2049750,2050815..2050885)
location: region:2014547-2050885:1
so has part: feature:2014547-2014798:1:exon
so has part: feature:2016794-2016856:1:exon
so has part: feature:2024897-2024983:1:exon
so has part: feature:2027305-2027543:1:exon
so has part: feature:2028734-2028816:1:exon
so has part: feature:2030865-2031032:1:exon
so has part: feature:2032057-2032100:1:exon
so has part: feature:2033015-2033692:1:exon
so has part: feature:2036277-2036399:1:exon
so has part: feature:2037630-2037711:1:exon
so has part: feature:2038791-2038846:1:exon
so has part: feature:2043024-2043170:1:exon
so has part: feature:2045270-2045438:1:exon
so has part: feature:2046845-2046967:1:exon
so has part: feature:2047703-2047803:1:exon
so has part: feature:2049687-2049750:1:exon
so has part: feature:2050815-2050885:1:exon

XP_032329137.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2014547-2014798:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2016794-2016856:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2024897-2024983:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2027305-2027543:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2028734-2028816:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2030865-2031032:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2032057-2032100:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2033015-2033692:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2036277-2036399:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2037630-2037711:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2038791-2038846:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2043024-2043170:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2045270-2045438:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2046845-2046967:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2047703-2047803:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2049687-2049750:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:2050815-2050885:1:exon

CAPRIN2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 419612
gene: CAPRIN2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: caprin-2 isoform X8
translation: MVQLSPSPFGYQSPSGRSEEGKEGTMKSARPQVNHSHHGESQRALSPLQPALSSATSPSQAYETYIDNGLICLKHKIRNIEKKKLKLEDYKDRLKNGEHLNPDQLEAVEKYEEVLHNLEFAKELQKTFSGLSQDLLKAQKKAQRREHMLKLEAEKKKLRTVLQVQYVLQNLTQEHVQKDFRGGLNGAVYLPLKELDYLIKFSKLTCPERNESLSVEDQMEQSSLYFWDLLEGSEKAVVGTTYKHMKDLLSKLLNSGYFESIPVPKNAKEKEVSLEEEMLIKSEKKKQLLKTESVKESESLMELAQPEIQPQEFLNRRYMTEVDYSSKQDEEQPWEADYARKPNLPKCWDMLTEPDGQEKKQESFKSWEASVKHPEVSKPAGSLEQRKQEIPKLRSALQEEQRKQDVSKAKPTPSQWKQEAPKPKAGYSQEESKKQETPKPWPVQLQKDQDPKKQTPKSWAPSVQSEQNVTKSWTTPVCEDQDARQPETPKSWENNAESQKHPLPPQSQISPKSWGVATASLIPNDQLLPGKFNTEPKDVPKPMHQPVGSSSALPKDPVLRKEKLQDLMTQIQGTCNFMQESILDFDKPSSAIPSSQPPSATPGSPVASTEQNLSNQSDFLQEPLQAASSPVTCSSNACLVTTDQASSGSETEFMTSEAPEAAVPPSKQPPSLASPNPPMSKGSEQGFQSPPASSSSVTINTAPFQAMQTVFNVNAPLPPRKEQEIKEPPYSSGYNQSFTTASTQTPPQCQLPAIHVEQTVLSQETAASYPDGTIQVSNGSLAFYPAQTNVLPRPSQPFVSSRGSVRGCSRGGRLLTNSYRSPGGYKGFDTYRGPPSISNGNYSQLQFQAREYPGTPYTQRDNFQQCYKRGGTSGGPRANSRVAD
SIO_010081: CAPRIN2
subclass of: SO_0000673
so part of: CAPRIN2
location: join(2014547..2014798,2016794..2016856,2024897..2024983,2027305..2027543,2028734..2028816,2030865..2031032,2032057..2032100,2033015..2033692,2036277..2036399,2037630..2037711,2038791..2038846,2041609..2041713,2043024..2043170,2045270..2045438,2046785..2046967,2047703..2047803,2049687..2049750,2050783..2050793)
location: region:2014547-2050793:1
so has part: feature:2014547-2014798:1:exon
so has part: feature:2016794-2016856:1:exon
so has part: feature:2024897-2024983:1:exon
so has part: feature:2027305-2027543:1:exon
so has part: feature:2028734-2028816:1:exon
so has part: feature:2030865-2031032:1:exon
so has part: feature:2032057-2032100:1:exon
so has part: feature:2033015-2033692:1:exon
so has part: feature:2036277-2036399:1:exon
so has part: feature:2037630-2037711:1:exon
so has part: feature:2038791-2038846:1:exon
so has part: feature:2041609-2041713:1:exon
so has part: feature:2043024-2043170:1:exon
so has part: feature:2045270-2045438:1:exon
so has part: feature:2046785-2046967:1:exon
so has part: feature:2047703-2047803:1:exon
so has part: feature:2049687-2049750:1:exon
so has part: feature:2050783-2050793:1:exon

XP_032329134.1
type: Protein
SIO_000068: ncbiprotein

position:2050793:1
position: 2050793
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2014547-2014798:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2016794-2016856:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2024897-2024983:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2027305-2027543:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2028734-2028816:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2030865-2031032:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2032057-2032100:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2033015-2033692:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2036277-2036399:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2037630-2037711:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2038791-2038846:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2041609-2041713:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2043024-2043170:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2045270-2045438:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2046785-2046967:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2047703-2047803:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:2049687-2049750:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:2050783-2050793:1:exon

CAPRIN2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 419612
gene: CAPRIN2
product: caprin family member 2, transcript variant X9
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 21 samples with support for all annotated introns
transcript id: XM_032473244.1
SIO_010081: CAPRIN2
subclass of: SO_0000673
so part of: CAPRIN2
location: join(2027405..2027543,2030865..2031032,2032057..2032100,2033015..2033692,2036277..2036399,2037630..2037711,2038791..2038846,2041609..2041713,2043024..2043170,2045270..2045438,2046785..2046967,2047703..2047803,2049687..2049750,2050859..2051783)
location: region:2027405-2051783:1
so has part: feature:2027405-2027543:1:exon
so has part: feature:2030865-2031032:1:exon
so has part: feature:2032057-2032100:1:exon
so has part: feature:2033015-2033692:1:exon
so has part: feature:2036277-2036399:1:exon
so has part: feature:2037630-2037711:1:exon
so has part: feature:2038791-2038846:1:exon
so has part: feature:2041609-2041713:1:exon
so has part: feature:2043024-2043170:1:exon
so has part: feature:2045270-2045438:1:exon
so has part: feature:2046785-2046967:1:exon
so has part: feature:2047703-2047803:1:exon
so has part: feature:2049687-2049750:1:exon
so has part: feature:2050859-2051783:1:exon

position:2027405:1
position: 2027405
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2027405-2027543:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2030865-2031032:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2032057-2032100:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2033015-2033692:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2036277-2036399:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2037630-2037711:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2038791-2038846:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2041609-2041713:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2043024-2043170:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2045270-2045438:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2046785-2046967:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2047703-2047803:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2049687-2049750:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2050859-2051783:1:exon

CAPRIN2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 419612
gene: CAPRIN2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: caprin-2 isoform X9
translation: MKDLLSKLLNSGYFESIPVPKNAKEKEVSLEEEMLIKSEKKKQLLKTESVKESESLMELAQPEIQPQEFLNRRYMTEVDYSSKQDEEQPWEADYARKPNLPKCWDMLTEPDGQEKKQESFKSWEASVKHPEVSKPAGSLEQRKQEIPKLRSALQEEQRKQDVSKAKPTPSQWKQEAPKPKAGYSQEESKKQETPKPWPVQLQKDQDPKKQTPKSWAPSVQSEQNVTKSWTTPVCEDQDARQPETPKSWENNAESQKHPLPPQSQISPKSWGVATASLIPNDQLLPGKFNTEPKDVPKPMHQPVGSSSALPKDPVLRKEKLQDLMTQIQGTCNFMQESILDFDKPSSAIPSSQPPSATPGSPVASTEQNLSNQSDFLQEPLQAASSPVTCSSNACLVTTDQASSGSETEFMTSEAPEAAVPPSKQPPSLASPNPPMSKGSEQGFQSPPASSSSVTINTAPFQAMQTVFNVNAPLPPRKEQEIKEPPYSSGYNQSFTTASTQTPPQCQLPAIHVEQTVLSQETAASYPDGTIQVSNGSLAFYPAQTNVLPRPSQPFVSSRGSVRGCSRGGRLLTNSYRSPGGYKGFDTYRGPPSISNGNYSQLQFQAREYPGTPYTQRDNFQQCYKRGGTSGGPRANSRAGWSDSSQVSSPERDNETFNSGDSGQGDSRSMTPVDVPATNPAATILPVHVYPLPQQMRVAFSAARTSNLAPGTLDQPIVFDLLLNNLGETFDLQLGRFNCPVNGTYVFIFHMLKLAVNVPLYVNLMKNEEVLVSAYANDGAPDHETASNHAILQLFQGDQIWLRLHRGAIYGSSWKYSTFSGYLLYQD
SIO_010081: CAPRIN2
subclass of: SO_0000673
so part of: CAPRIN2
location: join(2030873..2031032,2032057..2032100,2033015..2033692,2036277..2036399,2037630..2037711,2038791..2038846,2041609..2041713,2043024..2043170,2045270..2045438,2046785..2046967,2047703..2047803,2049687..2049750,2050859..2051427)
location: region:2030873-2051427:1
so has part: feature:2030873-2031032:1:exon
so has part: feature:2032057-2032100:1:exon
so has part: feature:2033015-2033692:1:exon
so has part: feature:2036277-2036399:1:exon
so has part: feature:2037630-2037711:1:exon
so has part: feature:2038791-2038846:1:exon
so has part: feature:2041609-2041713:1:exon
so has part: feature:2043024-2043170:1:exon
so has part: feature:2045270-2045438:1:exon
so has part: feature:2046785-2046967:1:exon
so has part: feature:2047703-2047803:1:exon
so has part: feature:2049687-2049750:1:exon
so has part: feature:2050859-2051427:1:exon

XP_032329135.1
type: Protein
SIO_000068: ncbiprotein

position:2030873:1
position: 2030873
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2030873-2031032:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2032057-2032100:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2033015-2033692:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2036277-2036399:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2037630-2037711:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2038791-2038846:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2041609-2041713:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2043024-2043170:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2045270-2045438:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2046785-2046967:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2047703-2047803:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2049687-2049750:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2050859-2051427:1:exon

LOC116661341
type: Gene
subclass of: SO_0000704
RO_0002162: 419612
gene: LOC116661341
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2041157..2044587)
location: region:2041157-2044587:-1
so has part: feature:2041157-2044587:-1:exon
subclass of: SO_0000011

116661341
type: Gene
SIO_000068: ncbigene

position:2041157:-1
position: 2041157
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2044587:-1
position: 2044587
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2041157-2044587:-1:exon

LOC116661341
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 419612
nc RNA class: lncRNA
gene: LOC116661341
product: uncharacterized LOC116661341
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XR_004317223.1
SIO_010081: LOC116661341
subclass of: SO_0000673
so part of: LOC116661341
location: complement(join(2041157..2041167,2043803..2043807,2044509..2044587))
location: region:2041157-2044587:-1
so has part: feature:2044509-2044587:-1:exon
so has part: feature:2043803-2043807:-1:exon
so has part: feature:2041157-2041167:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2044509-2044587:-1:exon

position:2044509:-1
position: 2044509
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2043803-2043807:-1:exon

position:2043803:-1
position: 2043803
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2043807:-1
position: 2043807
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2041157-2041167:-1:exon

position:2041167:-1
position: 2041167
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC116661340
type: Gene
subclass of: SO_0000704
RO_0002162: 419612
gene: LOC116661340
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2052648..2064084)
location: region:2052648-2064084:-1
so has part: feature:2052648-2064084:-1:exon
subclass of: SO_0000011

116661340
type: Gene
SIO_000068: ncbigene

position:2052648:-1
position: 2052648
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2064084:-1
position: 2064084
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2052648-2064084:-1:exon

LOC116661340
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 419612
nc RNA class: lncRNA
gene: LOC116661340
product: uncharacterized LOC116661340
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XR_004317222.1
SIO_010081: LOC116661340
subclass of: SO_0000673
so part of: LOC116661340
location: complement(join(2052648..2053593,2055731..2055862,2062445..2062986,2063538..2064084))
location: region:2052648-2064084:-1
so has part: feature:2063538-2064084:-1:exon
so has part: feature:2062445-2062986:-1:exon
so has part: feature:2055731-2055862:-1:exon
so has part: feature:2052648-2053593:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2063538-2064084:-1:exon

position:2063538:-1
position: 2063538
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2062445-2062986:-1:exon

position:2062445:-1
position: 2062445
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2062986:-1
position: 2062986
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2055731-2055862:-1:exon

position:2055731:-1
position: 2055731
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2055862:-1
position: 2055862
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2052648-2053593:-1:exon

position:2053593:-1
position: 2053593
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

IPO8
type: Gene
subclass of: SO_0000704
RO_0002162: 419612
gene: IPO8
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2061788..2121808
location: region:2061788-2121808:1
so has part: feature:2061788-2121808:1:exon
subclass of: SO_0000010

102504569
type: Gene
SIO_000068: ncbigene

position:2061788:1
position: 2061788
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2121808:1
position: 2121808
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2061788-2121808:1:exon

IPO8
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 419612
gene: IPO8
product: importin 8
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 35 samples with support for all annotated introns
transcript id: XM_032473247.1
SIO_010081: IPO8
subclass of: SO_0000673
so part of: IPO8
location: join(2061788..2062228,2067729..2067810,2070823..2070979,2073602..2073760,2074745..2074901,2079441..2079530,2081024..2081118,2081545..2081629,2083332..2083466,2085145..2085244,2087376..2087452,2087729..2087845,2088297..2088386,2089677..2089842,2090772..2090932,2091736..2091861,2095222..2095288,2098428..2098553,2099236..2099333,2101764..2101859,2109152..2109372,2111365..2111570,2116714..2116917,2118527..2118643,2119811..2121808)
location: region:2061788-2121808:1
so has part: feature:2061788-2062228:1:exon
so has part: feature:2067729-2067810:1:exon
so has part: feature:2070823-2070979:1:exon
so has part: feature:2073602-2073760:1:exon
so has part: feature:2074745-2074901:1:exon
so has part: feature:2079441-2079530:1:exon
so has part: feature:2081024-2081118:1:exon
so has part: feature:2081545-2081629:1:exon
so has part: feature:2083332-2083466:1:exon
so has part: feature:2085145-2085244:1:exon
so has part: feature:2087376-2087452:1:exon
so has part: feature:2087729-2087845:1:exon
so has part: feature:2088297-2088386:1:exon
so has part: feature:2089677-2089842:1:exon
so has part: feature:2090772-2090932:1:exon
so has part: feature:2091736-2091861:1:exon
so has part: feature:2095222-2095288:1:exon
so has part: feature:2098428-2098553:1:exon
so has part: feature:2099236-2099333:1:exon
so has part: feature:2101764-2101859:1:exon
so has part: feature:2109152-2109372:1:exon
so has part: feature:2111365-2111570:1:exon
so has part: feature:2116714-2116917:1:exon
so has part: feature:2118527-2118643:1:exon
so has part: feature:2119811-2121808:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2061788-2062228:1:exon

position:2062228:1
position: 2062228
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2067729-2067810:1:exon

position:2067729:1
position: 2067729
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2067810:1
position: 2067810
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2070823-2070979:1:exon

position:2070823:1
position: 2070823
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2070979:1
position: 2070979
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2073602-2073760:1:exon

position:2073602:1
position: 2073602
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2073760:1
position: 2073760
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2074745-2074901:1:exon

position:2074745:1
position: 2074745
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2074901:1
position: 2074901
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2079441-2079530:1:exon

position:2079441:1
position: 2079441
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2079530:1
position: 2079530
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:2081024-2081118:1:exon

position:2081024:1
position: 2081024
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2081118:1
position: 2081118
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:2081545-2081629:1:exon

position:2081545:1
position: 2081545
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2081629:1
position: 2081629
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:2083332-2083466:1:exon

position:2083332:1
position: 2083332
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2083466:1
position: 2083466
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:2085145-2085244:1:exon

position:2085145:1
position: 2085145
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2085244:1
position: 2085244
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:2087376-2087452:1:exon

position:2087376:1
position: 2087376
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2087452:1
position: 2087452
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:2087729-2087845:1:exon

position:2087729:1
position: 2087729
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2087845:1
position: 2087845
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:2088297-2088386:1:exon

position:2088297:1
position: 2088297
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2088386:1
position: 2088386
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:2089677-2089842:1:exon

position:2089677:1
position: 2089677
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2089842:1
position: 2089842
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:2090772-2090932:1:exon

position:2090772:1
position: 2090772
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2090932:1
position: 2090932
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:2091736-2091861:1:exon

position:2091736:1
position: 2091736
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2091861:1
position: 2091861
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:2095222-2095288:1:exon

position:2095222:1
position: 2095222
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2095288:1
position: 2095288
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:2098428-2098553:1:exon

position:2098428:1
position: 2098428
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2098553:1
position: 2098553
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:2099236-2099333:1:exon

position:2099236:1
position: 2099236
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2099333:1
position: 2099333
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:2101764-2101859:1:exon

position:2101764:1
position: 2101764
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2101859:1
position: 2101859
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:2109152-2109372:1:exon

position:2109152:1
position: 2109152
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2109372:1
position: 2109372
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:2111365-2111570:1:exon

position:2111365:1
position: 2111365
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2111570:1
position: 2111570
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:2116714-2116917:1:exon

position:2116714:1
position: 2116714
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2116917:1
position: 2116917
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:2118527-2118643:1:exon

position:2118527:1
position: 2118527
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2118643:1
position: 2118643
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:2119811-2121808:1:exon

position:2119811:1
position: 2119811
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

IPO8
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 419612
gene: IPO8
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: importin-8
translation: MDLNRIIQALKGTIDPKLRIAAENELNQSYKIINFAPSLLRIIVSDHVEFPVRQAAAIYLKNMVTQYWPDREPPPGEAIFPFNIHENDRQQIRDNIVEGIIRSPDLVRVQLTMCLRAIIKYDFPGHWPAVVDKIDYYLQSQSSGSWLGSLLCLYQLVKTYEYKKAEEREPLIAAMQIFLPRIQQQIMQLLPDSSHYSVLLQKQILKIFYALVQYALPLQLVNNQTMTAWMEIFRTIIDRTVPPETLQIDEDDRPELVWWKCKKWALHIVARLFERYGSPGNVTKEYFEFSEFFLKTYAVGIQQVLLKILDQFRQKEYVAPRVLQQAFNYLNQGIVHSVTWKQMKPHIQNISEDVIFSVMCYKDEDEELWQEDPYEYIRMKFDIFEDYASPTTAAQTLLYTAAKKRKEVLPKMMAFCYQILTDPNFDPRKKDGALHVIGSLADILLKKSLFKDQMELLLQNHVFPLLLSNLGYLRARSCWVLHAFSSLKFHNELNLRNAVDLAKKSLIEDKEMPVKVEAALALQSLISNQAQAKEYMKPHVRPIMQELLHIVRETENDDVTNVIQKMICEYSQEVASIAVDMTQHLAEIFGKVLQSDEYEEVEDKTVMAMGILHTIDTILTVVEDHKEVTQQLESICLRIIDLVLQKHVIEFYEEILSLAYSLTCRVISPQMWQLLGILYEVFQQDCFEYFTDMMPLLHNYVTIDTNTLLSNPKHLEILFTMCRKVLCGDAGEDAECHAAKLLEVIILQCKGRGIDQCIPLFVQLVLERLTRGVKTSELRTMCLQVAIAALYYKPDLLLHTLERIQLPHNPGPVTVQFINQWMNDTDCFLGHHDRKMCIIGLSILLELQNRPPAVDAVVGQIVPSILFLFLGLKQVCATRQLVNREDRSKAEKTDVEENEEISSDEEETNVTAQAMQSNNGRGEDEEEDDDDWDEEVLEETALEGFSTPLDLDNSVDEYQFFTQALLTVQNRDAAWYQLLMAPLSEDQRRALQEVYTLAEHRRTVAEAKKKIEQQGGFTFENKGVLSAFNFGTMPSDN
SIO_010081: IPO8
subclass of: SO_0000673
so part of: IPO8
location: join(2062145..2062228,2067729..2067810,2070823..2070979,2073602..2073760,2074745..2074901,2079441..2079530,2081024..2081118,2081545..2081629,2083332..2083466,2085145..2085244,2087376..2087452,2087729..2087845,2088297..2088386,2089677..2089842,2090772..2090932,2091736..2091861,2095222..2095288,2098428..2098553,2099236..2099333,2101764..2101859,2109152..2109372,2111365..2111570,2116714..2116917,2118527..2118643,2119811..2119908)
location: region:2062145-2119908:1
so has part: feature:2062145-2062228:1:exon
so has part: feature:2067729-2067810:1:exon
so has part: feature:2070823-2070979:1:exon
so has part: feature:2073602-2073760:1:exon
so has part: feature:2074745-2074901:1:exon
so has part: feature:2079441-2079530:1:exon
so has part: feature:2081024-2081118:1:exon
so has part: feature:2081545-2081629:1:exon
so has part: feature:2083332-2083466:1:exon
so has part: feature:2085145-2085244:1:exon
so has part: feature:2087376-2087452:1:exon
so has part: feature:2087729-2087845:1:exon
so has part: feature:2088297-2088386:1:exon
so has part: feature:2089677-2089842:1:exon
so has part: feature:2090772-2090932:1:exon
so has part: feature:2091736-2091861:1:exon
so has part: feature:2095222-2095288:1:exon
so has part: feature:2098428-2098553:1:exon
so has part: feature:2099236-2099333:1:exon
so has part: feature:2101764-2101859:1:exon
so has part: feature:2109152-2109372:1:exon
so has part: feature:2111365-2111570:1:exon
so has part: feature:2116714-2116917:1:exon
so has part: feature:2118527-2118643:1:exon
so has part: feature:2119811-2119908:1:exon

XP_032329138.1
type: Protein
SIO_000068: ncbiprotein

position:2062145:1
position: 2062145
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2119908:1
position: 2119908
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2062145-2062228:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2067729-2067810:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2070823-2070979:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2073602-2073760:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2074745-2074901:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2079441-2079530:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2081024-2081118:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2081545-2081629:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2083332-2083466:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2085145-2085244:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2087376-2087452:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2087729-2087845:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2088297-2088386:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2089677-2089842:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2090772-2090932:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2091736-2091861:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:2095222-2095288:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:2098428-2098553:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:2099236-2099333:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:2101764-2101859:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:2109152-2109372:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:2111365-2111570:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:2116714-2116917:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:2118527-2118643:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:2119811-2119908:1:exon

TRNAA-UGC
type: Gene
subclass of: SO_0000704
RO_0002162: 419612
gene: TRNAA-UGC
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
so part of: sequence
location: complement(2064258..2064329)
location: region:2064258-2064329:-1
so has part: feature:2064258-2064329:-1:exon
subclass of: SO_0000663

116661407
type: Gene
SIO_000068: ncbigene

position:2064258:-1
position: 2064258
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2064329:-1
position: 2064329
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2064258-2064329:-1:exon

TRNAA-UGC
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 419612
gene: TRNAA-UGC
product: tRNA-Ala
inference: COORDINATES: profile:tRNAscan-SE:1.23
note: transfer RNA alanine (anticodon UGC); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:complement(2064295..2064297),aa:Ala, seq:tgc)
SIO_010081: TRNAA-UGC
subclass of: SO_0000673
so part of: TRNAA-UGC
location: complement(2064258..2064329)
location: region:2064258-2064329:-1
so has part: feature:2064258-2064329:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2064258-2064329:-1:exon

TRNAA-GGC
type: Gene
subclass of: SO_0000704
RO_0002162: 419612
gene: TRNAA-GGC
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
so part of: sequence
location: complement(2129463..2129534)
location: region:2129463-2129534:-1
so has part: feature:2129463-2129534:-1:exon
subclass of: SO_0000663

116661408
type: Gene
SIO_000068: ncbigene

position:2129463:-1
position: 2129463
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2129534:-1
position: 2129534
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2129463-2129534:-1:exon

TRNAA-GGC
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 419612
gene: TRNAA-GGC
product: tRNA-Ala
inference: COORDINATES: profile:tRNAscan-SE:1.23
note: transfer RNA alanine (anticodon GGC); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:complement(2129500..2129502),aa:Ala, seq:ggc)
SIO_010081: TRNAA-GGC
subclass of: SO_0000673
so part of: TRNAA-GGC
location: complement(2129463..2129534)
location: region:2129463-2129534:-1
so has part: feature:2129463-2129534:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2129463-2129534:-1:exon

TMTC1
type: Gene
subclass of: SO_0000704
RO_0002162: 419612
gene: TMTC1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2356617..2596488
location: region:2356617-2596488:1
so has part: feature:2356617-2596488:1:exon
subclass of: SO_0000010

102504993
type: Gene
SIO_000068: ncbigene

position:2356617:1
position: 2356617
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2596488:1
position: 2596488
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2356617-2596488:1:exon

TMTC1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 419612
gene: TMTC1
product: transmembrane O-mannosyltransferase targeting cadherins 1, transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_032473164.1
SIO_010081: TMTC1
subclass of: SO_0000673
so part of: TMTC1
location: join(2356617..2356635,2377822..2377999,2386509..2386582,2389025..2389201,2393211..2393480,2465181..2465262,2467375..2467478,2479363..2479552,2502569..2502690,2517301..2517468,2527947..2528060,2543584..2543727,2561360..2561468,2577315..2577417,2579481..2579616,2580432..2580576,2581718..2581855,2583210..2583332,2585859..2585936,2590560..2596488)
location: region:2356617-2596488:1
so has part: feature:2356617-2356635:1:exon
so has part: feature:2377822-2377999:1:exon
so has part: feature:2386509-2386582:1:exon
so has part: feature:2389025-2389201:1:exon
so has part: feature:2393211-2393480:1:exon
so has part: feature:2465181-2465262:1:exon
so has part: feature:2467375-2467478:1:exon
so has part: feature:2479363-2479552:1:exon
so has part: feature:2502569-2502690:1:exon
so has part: feature:2517301-2517468:1:exon
so has part: feature:2527947-2528060:1:exon
so has part: feature:2543584-2543727:1:exon
so has part: feature:2561360-2561468:1:exon
so has part: feature:2577315-2577417:1:exon
so has part: feature:2579481-2579616:1:exon
so has part: feature:2580432-2580576:1:exon
so has part: feature:2581718-2581855:1:exon
so has part: feature:2583210-2583332:1:exon
so has part: feature:2585859-2585936:1:exon
so has part: feature:2590560-2596488:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2356617-2356635:1:exon

position:2356635:1
position: 2356635
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2377822-2377999:1:exon

position:2377822:1
position: 2377822
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2377999:1
position: 2377999
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2386509-2386582:1:exon

position:2386509:1
position: 2386509
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2386582:1
position: 2386582
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2389025-2389201:1:exon

position:2389025:1
position: 2389025
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2389201:1
position: 2389201
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2393211-2393480:1:exon

position:2393211:1
position: 2393211
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2393480:1
position: 2393480
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2465181-2465262:1:exon

position:2465181:1
position: 2465181
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2465262:1
position: 2465262
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:2467375-2467478:1:exon

position:2467375:1
position: 2467375
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2467478:1
position: 2467478
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:2479363-2479552:1:exon

position:2479363:1
position: 2479363
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2479552:1
position: 2479552
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:2502569-2502690:1:exon

position:2502569:1
position: 2502569
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2502690:1
position: 2502690
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:2517301-2517468:1:exon

position:2517301:1
position: 2517301
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2517468:1
position: 2517468
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:2527947-2528060:1:exon

position:2527947:1
position: 2527947
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2528060:1
position: 2528060
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:2543584-2543727:1:exon

position:2543584:1
position: 2543584
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2543727:1
position: 2543727
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:2561360-2561468:1:exon

position:2561360:1
position: 2561360
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2561468:1
position: 2561468
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:2577315-2577417:1:exon

position:2577315:1
position: 2577315
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2577417:1
position: 2577417
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:2579481-2579616:1:exon

position:2579481:1
position: 2579481
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2579616:1
position: 2579616
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:2580432-2580576:1:exon

position:2580432:1
position: 2580432
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2580576:1
position: 2580576
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:2581718-2581855:1:exon

position:2581718:1
position: 2581718
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2581855:1
position: 2581855
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:2583210-2583332:1:exon

position:2583210:1
position: 2583210
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2583332:1
position: 2583332
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:2585859-2585936:1:exon

position:2585859:1
position: 2585859
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2585936:1
position: 2585936
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:2590560-2596488:1:exon

position:2590560:1
position: 2590560
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

TMTC1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 419612
gene: TMTC1
product: transmembrane O-mannosyltransferase targeting cadherins 1, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_032473161.1
SIO_010081: TMTC1
subclass of: SO_0000673
so part of: TMTC1
location: join(2357292..2357786,2377822..2377999,2386509..2386582,2389025..2389201,2393211..2393480,2465181..2465262,2467375..2467478,2479363..2479552,2502569..2502690,2517301..2517468,2527947..2528060,2543584..2543727,2561360..2561468,2577315..2577417,2579481..2579616,2580432..2580576,2581718..2581855,2583210..2583332,2585552..2585806)
location: region:2357292-2585806:1
so has part: feature:2357292-2357786:1:exon
so has part: feature:2377822-2377999:1:exon
so has part: feature:2386509-2386582:1:exon
so has part: feature:2389025-2389201:1:exon
so has part: feature:2393211-2393480:1:exon
so has part: feature:2465181-2465262:1:exon
so has part: feature:2467375-2467478:1:exon
so has part: feature:2479363-2479552:1:exon
so has part: feature:2502569-2502690:1:exon
so has part: feature:2517301-2517468:1:exon
so has part: feature:2527947-2528060:1:exon
so has part: feature:2543584-2543727:1:exon
so has part: feature:2561360-2561468:1:exon
so has part: feature:2577315-2577417:1:exon
so has part: feature:2579481-2579616:1:exon
so has part: feature:2580432-2580576:1:exon
so has part: feature:2581718-2581855:1:exon
so has part: feature:2583210-2583332:1:exon
so has part: feature:2585552-2585806:1:exon

position:2357292:1
position: 2357292
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2585806:1
position: 2585806
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2357292-2357786:1:exon

position:2357786:1
position: 2357786
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2377822-2377999:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2386509-2386582:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2389025-2389201:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2393211-2393480:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2465181-2465262:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2467375-2467478:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2479363-2479552:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2502569-2502690:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2517301-2517468:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2527947-2528060:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2543584-2543727:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2561360-2561468:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2577315-2577417:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2579481-2579616:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2580432-2580576:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:2581718-2581855:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:2583210-2583332:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:2585552-2585806:1:exon

position:2585552:1
position: 2585552
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

TMTC1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 419612
gene: TMTC1
product: transmembrane O-mannosyltransferase targeting cadherins 1, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_032473163.1
SIO_010081: TMTC1
subclass of: SO_0000673
so part of: TMTC1
location: join(2357293..2357786,2377822..2377999,2386509..2386582,2389025..2389201,2393211..2393480,2465181..2465262,2467375..2467478,2517301..2517468,2527947..2528060,2543584..2543727,2561360..2561468,2577315..2577417,2579481..2579616,2580432..2580576,2581718..2581855,2583210..2583332,2585859..2585936,2590560..2596488)
location: region:2357293-2596488:1
so has part: feature:2357293-2357786:1:exon
so has part: feature:2377822-2377999:1:exon
so has part: feature:2386509-2386582:1:exon
so has part: feature:2389025-2389201:1:exon
so has part: feature:2393211-2393480:1:exon
so has part: feature:2465181-2465262:1:exon
so has part: feature:2467375-2467478:1:exon
so has part: feature:2517301-2517468:1:exon
so has part: feature:2527947-2528060:1:exon
so has part: feature:2543584-2543727:1:exon
so has part: feature:2561360-2561468:1:exon
so has part: feature:2577315-2577417:1:exon
so has part: feature:2579481-2579616:1:exon
so has part: feature:2580432-2580576:1:exon
so has part: feature:2581718-2581855:1:exon
so has part: feature:2583210-2583332:1:exon
so has part: feature:2585859-2585936:1:exon
so has part: feature:2590560-2596488:1:exon

position:2357293:1
position: 2357293
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2357293-2357786:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2377822-2377999:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2386509-2386582:1:exon

urn:…
SIO_000300: 4
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SIO_000300: 5
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urn:…
SIO_000300: 6
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urn:…
SIO_000300: 7
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urn:…
SIO_000300: 8
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urn:…
SIO_000300: 9
SIO_000628: feature:2527947-2528060:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2543584-2543727:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2561360-2561468:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2577315-2577417:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2579481-2579616:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2580432-2580576:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2581718-2581855:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2583210-2583332:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:2585859-2585936:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:2590560-2596488:1:exon

TMTC1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 419612
gene: TMTC1
product: transmembrane O-mannosyltransferase targeting cadherins 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_032473159.1
SIO_010081: TMTC1
subclass of: SO_0000673
so part of: TMTC1
location: join(2357294..2357786,2377822..2377999,2386509..2386582,2389025..2389201,2393211..2393480,2465181..2465262,2467375..2467478,2479363..2479552,2502569..2502690,2517301..2517468,2527947..2528060,2543584..2543727,2561360..2561468,2577315..2577417,2579481..2579616,2580432..2580576,2581718..2581855,2583210..2583332,2585859..2585936,2590560..2596488)
location: region:2357294-2596488:1
so has part: feature:2357294-2357786:1:exon
so has part: feature:2377822-2377999:1:exon
so has part: feature:2386509-2386582:1:exon
so has part: feature:2389025-2389201:1:exon
so has part: feature:2393211-2393480:1:exon
so has part: feature:2465181-2465262:1:exon
so has part: feature:2467375-2467478:1:exon
so has part: feature:2479363-2479552:1:exon
so has part: feature:2502569-2502690:1:exon
so has part: feature:2517301-2517468:1:exon
so has part: feature:2527947-2528060:1:exon
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so has part: feature:2561360-2561468:1:exon
so has part: feature:2577315-2577417:1:exon
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so has part: feature:2581718-2581855:1:exon
so has part: feature:2583210-2583332:1:exon
so has part: feature:2585859-2585936:1:exon
so has part: feature:2590560-2596488:1:exon

position:2357294:1
position: 2357294
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2357294-2357786:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2377822-2377999:1:exon

urn:…
SIO_000300: 3
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urn:…
SIO_000300: 4
SIO_000628: feature:2389025-2389201:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2393211-2393480:1:exon

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SIO_000300: 6
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urn:…
SIO_000300: 7
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SIO_000300: 8
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SIO_000300: 9
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SIO_000300: 10
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urn:…
SIO_000300: 11
SIO_000628: feature:2527947-2528060:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2543584-2543727:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2561360-2561468:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2577315-2577417:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2579481-2579616:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2580432-2580576:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:2581718-2581855:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:2583210-2583332:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:2585859-2585936:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:2590560-2596488:1:exon

TMTC1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 419612
gene: TMTC1
product: transmembrane O-mannosyltransferase targeting cadherins 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 33 samples with support for all annotated introns
transcript id: XM_032473160.1
SIO_010081: TMTC1
subclass of: SO_0000673
so part of: TMTC1
location: join(2357294..2357786,2377822..2377999,2386509..2386582,2389025..2389201,2393211..2393405,2465181..2465262,2467375..2467478,2479363..2479552,2502569..2502690,2517301..2517468,2527947..2528060,2543584..2543727,2561360..2561468,2577315..2577417,2579481..2579616,2580432..2580576,2581718..2581855,2583210..2583332,2585859..2585936,2590560..2596488)
location: region:2357294-2596488:1
so has part: feature:2357294-2357786:1:exon
so has part: feature:2377822-2377999:1:exon
so has part: feature:2386509-2386582:1:exon
so has part: feature:2389025-2389201:1:exon
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so has part: feature:2465181-2465262:1:exon
so has part: feature:2467375-2467478:1:exon
so has part: feature:2479363-2479552:1:exon
so has part: feature:2502569-2502690:1:exon
so has part: feature:2517301-2517468:1:exon
so has part: feature:2527947-2528060:1:exon
so has part: feature:2543584-2543727:1:exon
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so has part: feature:2577315-2577417:1:exon
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so has part: feature:2580432-2580576:1:exon
so has part: feature:2581718-2581855:1:exon
so has part: feature:2583210-2583332:1:exon
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urn:…
SIO_000300: 1
SIO_000628: feature:2357294-2357786:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2377822-2377999:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2386509-2386582:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2389025-2389201:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2393211-2393405:1:exon

position:2393405:1
position: 2393405
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2465181-2465262:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2467375-2467478:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2479363-2479552:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2502569-2502690:1:exon

urn:…
SIO_000300: 10
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urn:…
SIO_000300: 11
SIO_000628: feature:2527947-2528060:1:exon

urn:…
SIO_000300: 12
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urn:…
SIO_000300: 13
SIO_000628: feature:2561360-2561468:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2577315-2577417:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2579481-2579616:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2580432-2580576:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:2581718-2581855:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:2583210-2583332:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:2585859-2585936:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:2590560-2596488:1:exon

TMTC1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 419612
gene: TMTC1
product: transmembrane O-mannosyltransferase targeting cadherins 1, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 16 samples with support for all annotated introns
transcript id: XM_032473162.1
SIO_010081: TMTC1
subclass of: SO_0000673
so part of: TMTC1
location: join(2357294..2357786,2377822..2377999,2386509..2386582,2389025..2389201,2465181..2465262,2467375..2467478,2479363..2479552,2502569..2502690,2517301..2517468,2527947..2528060,2543584..2543727,2561360..2561468,2577315..2577417,2579481..2579616,2580432..2580576,2581718..2581855,2583210..2583332,2585859..2585936,2590560..2596488)
location: region:2357294-2596488:1
so has part: feature:2357294-2357786:1:exon
so has part: feature:2377822-2377999:1:exon
so has part: feature:2386509-2386582:1:exon
so has part: feature:2389025-2389201:1:exon
so has part: feature:2465181-2465262:1:exon
so has part: feature:2467375-2467478:1:exon
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so has part: feature:2502569-2502690:1:exon
so has part: feature:2517301-2517468:1:exon
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so has part: feature:2561360-2561468:1:exon
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so has part: feature:2579481-2579616:1:exon
so has part: feature:2580432-2580576:1:exon
so has part: feature:2581718-2581855:1:exon
so has part: feature:2583210-2583332:1:exon
so has part: feature:2585859-2585936:1:exon
so has part: feature:2590560-2596488:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2357294-2357786:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2377822-2377999:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2386509-2386582:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2389025-2389201:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2465181-2465262:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2467375-2467478:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2479363-2479552:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2502569-2502690:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2517301-2517468:1:exon

urn:…
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urn:…
SIO_000300: 11
SIO_000628: feature:2543584-2543727:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2561360-2561468:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2577315-2577417:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2579481-2579616:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2580432-2580576:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2581718-2581855:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:2583210-2583332:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:2585859-2585936:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:2590560-2596488:1:exon

TMTC1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 419612
gene: TMTC1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein O-mannosyl-transferase TMTC1 isoform X1
translation: MVVTGCARGGGGDRAPSRRRGCGLAPAGAAALLAGASCLCYGRSLRGEFVHDDVWAIVNNPDVRPGAPLHWGIFSNDFWGKGMAENTSHKSYRPLCVLTFKLNIFLTGMNPFYFHAVNVILHCLVTLVLMYTCDKTVFKNRGLAFVTALLFAVHPIHTEAVAGIVGRADVLACLLFLLAFLSYNRSVDQCCAGERVPPTASPFFLLLSLFLGTCAMLVKETGITVFGVCLVYDLFSLSHNHDKSSNGVLGARSPQPPGSAQPAHPPRENGKPQRPPHRGAWGGCHAPSPPEPKSSGFPVSPRAVRSLMRYWAGLVDSACFHQRASPAAQGRLQRYLTASSNRNFLLTMRPFLKRAILVISYVVVVLYFRLWIMGGSMPLFSEQDNPASFSPYILTRFLTYSYLLAFNVWLLLAPVTLCYDWQVGSIPLVETIWDMRNLATILLAVVMAVLSLHCLAAFKRLEHREVLAGLLFLVFPFIPASNLFFRVGFVVAERVLYMPSMGYCILVVHGLSKLCTWLNRCGATALSVSTVLLLLLFSWKTVKQNEIWLSRESLFRSGVQTLPHNAKVHYNYANFLKDQGRDREAIYHYRTALRLYPRHASALNNLGTLTRDTAEAKMYYQRALQLNPQHNRALFNLGNLLKSQEKKEEAITLLKDSIKYGPEFADAYSSLASLLAEQERFKEAEEIYQAGIKNCPDSSDLHNNYGVFLVDTGAPEKAVAHYQQAIRLSPSHHVAMVNLGRLCRSLGDNSEAEEWYKRALQVARRAEILAPLGALYYNTGRYEEALQVYREATALQPSQRELRLALAQVLAVMGQTKEAEKMTNHIVSEETGCLECYRLLSAIYSKHELHEKALDAIDKALKLKPKDPKVISELFFTKGNQLREQNLLDKAFESYRAAVELNPDQAQAWMNMGGIQHIKGNYVSARAYYETALQLVPDSKLLQENLAKLDRLEKRLQEVREKDQT
SIO_010081: TMTC1
subclass of: SO_0000673
so part of: TMTC1
location: join(2357485..2357786,2377822..2377999,2386509..2386582,2389025..2389201,2393211..2393480,2465181..2465262,2467375..2467478,2479363..2479552,2502569..2502690,2517301..2517468,2527947..2528060,2543584..2543727,2561360..2561468,2577315..2577417,2579481..2579616,2580432..2580576,2581718..2581855,2583210..2583332,2585859..2585936,2590560..2590700)
location: region:2357485-2590700:1
so has part: feature:2357485-2357786:1:exon
so has part: feature:2377822-2377999:1:exon
so has part: feature:2386509-2386582:1:exon
so has part: feature:2389025-2389201:1:exon
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so has part: feature:2465181-2465262:1:exon
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so has part: feature:2479363-2479552:1:exon
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so has part: feature:2517301-2517468:1:exon
so has part: feature:2527947-2528060:1:exon
so has part: feature:2543584-2543727:1:exon
so has part: feature:2561360-2561468:1:exon
so has part: feature:2577315-2577417:1:exon
so has part: feature:2579481-2579616:1:exon
so has part: feature:2580432-2580576:1:exon
so has part: feature:2581718-2581855:1:exon
so has part: feature:2583210-2583332:1:exon
so has part: feature:2585859-2585936:1:exon
so has part: feature:2590560-2590700:1:exon

XP_032329050.1
type: Protein
SIO_000068: ncbiprotein

position:2357485:1
position: 2357485
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2590700:1
position: 2590700
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2357485-2357786:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2377822-2377999:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2386509-2386582:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2389025-2389201:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2393211-2393480:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2465181-2465262:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2467375-2467478:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2479363-2479552:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2502569-2502690:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2517301-2517468:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2527947-2528060:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2543584-2543727:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2561360-2561468:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2577315-2577417:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2579481-2579616:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2580432-2580576:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:2581718-2581855:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:2583210-2583332:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:2585859-2585936:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:2590560-2590700:1:exon

TMTC1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 419612
gene: TMTC1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein O-mannosyl-transferase TMTC1 isoform X5
translation: MVVTGCARGGGGDRAPSRRRGCGLAPAGAAALLAGASCLCYGRSLRGEFVHDDVWAIVNNPDVRPGAPLHWGIFSNDFWGKGMAENTSHKSYRPLCVLTFKLNIFLTGMNPFYFHAVNVILHCLVTLVLMYTCDKTVFKNRGLAFVTALLFAVHPIHTEAVAGIVGRADVLACLLFLLAFLSYNRSVDQCCAGERVPPTASPFFLLLSLFLGTCAMLVKETGITVFGVCLVYDLFSLSHNHDKSSNGVLGARSPQPPGSAQPAHPPRENGKPQRPPHRGAWGGCHAPSPPEPKSSGFPVSPRAVRSLMRYWAGLVDSACFHQRASPAAQGRLQRYLTASSNRNFLLTMRPFLKRAILVISYVVVVLYFRLWIMGGSMPLFSEQDNPASFSPYILTSMGYCILVVHGLSKLCTWLNRCGATALSVSTVLLLLLFSWKTVKQNEIWLSRESLFRSGVQTLPHNAKVHYNYANFLKDQGRDREAIYHYRTALRLYPRHASALNNLGTLTRDTAEAKMYYQRALQLNPQHNRALFNLGNLLKSQEKKEEAITLLKDSIKYGPEFADAYSSLASLLAEQERFKEAEEIYQAGIKNCPDSSDLHNNYGVFLVDTGAPEKAVAHYQQAIRLSPSHHVAMVNLGRLCRSLGDNSEAEEWYKRALQVARRAEILAPLGALYYNTGRYEEALQVYREATALQPSQRELRLALAQVLAVMGQTKEAEKMTNHIVSEETGCLECYRLLSAIYSKHELHEKALDAIDKALKLKPKDPKVISELFFTKGNQLREQNLLDKAFESYRAAVELNPDQAQAWMNMGGIQHIKGNYVSARAYYETALQLVPDSKLLQENLAKLDRLEKRLQEVREKDQT
SIO_010081: TMTC1
subclass of: SO_0000673
so part of: TMTC1
location: join(2357485..2357786,2377822..2377999,2386509..2386582,2389025..2389201,2393211..2393480,2465181..2465262,2467375..2467478,2517301..2517468,2527947..2528060,2543584..2543727,2561360..2561468,2577315..2577417,2579481..2579616,2580432..2580576,2581718..2581855,2583210..2583332,2585859..2585936,2590560..2590700)
location: region:2357485-2590700:1
so has part: feature:2357485-2357786:1:exon
so has part: feature:2377822-2377999:1:exon
so has part: feature:2386509-2386582:1:exon
so has part: feature:2389025-2389201:1:exon
so has part: feature:2393211-2393480:1:exon
so has part: feature:2465181-2465262:1:exon
so has part: feature:2467375-2467478:1:exon
so has part: feature:2517301-2517468:1:exon
so has part: feature:2527947-2528060:1:exon
so has part: feature:2543584-2543727:1:exon
so has part: feature:2561360-2561468:1:exon
so has part: feature:2577315-2577417:1:exon
so has part: feature:2579481-2579616:1:exon
so has part: feature:2580432-2580576:1:exon
so has part: feature:2581718-2581855:1:exon
so has part: feature:2583210-2583332:1:exon
so has part: feature:2585859-2585936:1:exon
so has part: feature:2590560-2590700:1:exon

XP_032329054.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2357485-2357786:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2377822-2377999:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2386509-2386582:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2389025-2389201:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2393211-2393480:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2465181-2465262:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2467375-2467478:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2517301-2517468:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2527947-2528060:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2543584-2543727:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2561360-2561468:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2577315-2577417:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2579481-2579616:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2580432-2580576:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2581718-2581855:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2583210-2583332:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:2585859-2585936:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:2590560-2590700:1:exon

TMTC1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 419612
gene: TMTC1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein O-mannosyl-transferase TMTC1 isoform X2
translation: MVVTGCARGGGGDRAPSRRRGCGLAPAGAAALLAGASCLCYGRSLRGEFVHDDVWAIVNNPDVRPGAPLHWGIFSNDFWGKGMAENTSHKSYRPLCVLTFKLNIFLTGMNPFYFHAVNVILHCLVTLVLMYTCDKTVFKNRGLAFVTALLFAVHPIHTEAVAGIVGRADVLACLLFLLAFLSYNRSVDQCCAGERVPPTASPFFLLLSLFLGTCAMLVKETGITVFGVCLVYDLFSLSHNHDKSSNGVLGARSPQPPGSAQPAHPPRENGKPQRPPHRGAWGGCHAPSPPEPKSSGFPVSPRAVRSLMRYLTASSNRNFLLTMRPFLKRAILVISYVVVVLYFRLWIMGGSMPLFSEQDNPASFSPYILTRFLTYSYLLAFNVWLLLAPVTLCYDWQVGSIPLVETIWDMRNLATILLAVVMAVLSLHCLAAFKRLEHREVLAGLLFLVFPFIPASNLFFRVGFVVAERVLYMPSMGYCILVVHGLSKLCTWLNRCGATALSVSTVLLLLLFSWKTVKQNEIWLSRESLFRSGVQTLPHNAKVHYNYANFLKDQGRDREAIYHYRTALRLYPRHASALNNLGTLTRDTAEAKMYYQRALQLNPQHNRALFNLGNLLKSQEKKEEAITLLKDSIKYGPEFADAYSSLASLLAEQERFKEAEEIYQAGIKNCPDSSDLHNNYGVFLVDTGAPEKAVAHYQQAIRLSPSHHVAMVNLGRLCRSLGDNSEAEEWYKRALQVARRAEILAPLGALYYNTGRYEEALQVYREATALQPSQRELRLALAQVLAVMGQTKEAEKMTNHIVSEETGCLECYRLLSAIYSKHELHEKALDAIDKALKLKPKDPKVISELFFTKGNQLREQNLLDKAFESYRAAVELNPDQAQAWMNMGGIQHIKGNYVSARAYYETALQLVPDSKLLQENLAKLDRLEKRLQEVREKDQT
SIO_010081: TMTC1
subclass of: SO_0000673
so part of: TMTC1
location: join(2357485..2357786,2377822..2377999,2386509..2386582,2389025..2389201,2393211..2393405,2465181..2465262,2467375..2467478,2479363..2479552,2502569..2502690,2517301..2517468,2527947..2528060,2543584..2543727,2561360..2561468,2577315..2577417,2579481..2579616,2580432..2580576,2581718..2581855,2583210..2583332,2585859..2585936,2590560..2590700)
location: region:2357485-2590700:1
so has part: feature:2357485-2357786:1:exon
so has part: feature:2377822-2377999:1:exon
so has part: feature:2386509-2386582:1:exon
so has part: feature:2389025-2389201:1:exon
so has part: feature:2393211-2393405:1:exon
so has part: feature:2465181-2465262:1:exon
so has part: feature:2467375-2467478:1:exon
so has part: feature:2479363-2479552:1:exon
so has part: feature:2502569-2502690:1:exon
so has part: feature:2517301-2517468:1:exon
so has part: feature:2527947-2528060:1:exon
so has part: feature:2543584-2543727:1:exon
so has part: feature:2561360-2561468:1:exon
so has part: feature:2577315-2577417:1:exon
so has part: feature:2579481-2579616:1:exon
so has part: feature:2580432-2580576:1:exon
so has part: feature:2581718-2581855:1:exon
so has part: feature:2583210-2583332:1:exon
so has part: feature:2585859-2585936:1:exon
so has part: feature:2590560-2590700:1:exon

XP_032329051.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2357485-2357786:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2377822-2377999:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2386509-2386582:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2389025-2389201:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2393211-2393405:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2465181-2465262:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2467375-2467478:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2479363-2479552:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2502569-2502690:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2517301-2517468:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2527947-2528060:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2543584-2543727:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2561360-2561468:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2577315-2577417:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2579481-2579616:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2580432-2580576:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:2581718-2581855:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:2583210-2583332:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:2585859-2585936:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:2590560-2590700:1:exon

TMTC1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 419612
gene: TMTC1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein O-mannosyl-transferase TMTC1 isoform X4
translation: MVVTGCARGGGGDRAPSRRRGCGLAPAGAAALLAGASCLCYGRSLRGEFVHDDVWAIVNNPDVRPGAPLHWGIFSNDFWGKGMAENTSHKSYRPLCVLTFKLNIFLTGMNPFYFHAVNVILHCLVTLVLMYTCDKTVFKNRGLAFVTALLFAVHPIHTEAVAGIVGRADVLACLLFLLAFLSYNRSVDQCCAGERVPPTASPFFLLLSLFLGTCAMLVKETGITVFGVCLVYDLFSLSHNHDKSYLTASSNRNFLLTMRPFLKRAILVISYVVVVLYFRLWIMGGSMPLFSEQDNPASFSPYILTRFLTYSYLLAFNVWLLLAPVTLCYDWQVGSIPLVETIWDMRNLATILLAVVMAVLSLHCLAAFKRLEHREVLAGLLFLVFPFIPASNLFFRVGFVVAERVLYMPSMGYCILVVHGLSKLCTWLNRCGATALSVSTVLLLLLFSWKTVKQNEIWLSRESLFRSGVQTLPHNAKVHYNYANFLKDQGRDREAIYHYRTALRLYPRHASALNNLGTLTRDTAEAKMYYQRALQLNPQHNRALFNLGNLLKSQEKKEEAITLLKDSIKYGPEFADAYSSLASLLAEQERFKEAEEIYQAGIKNCPDSSDLHNNYGVFLVDTGAPEKAVAHYQQAIRLSPSHHVAMVNLGRLCRSLGDNSEAEEWYKRALQVARRAEILAPLGALYYNTGRYEEALQVYREATALQPSQRELRLALAQVLAVMGQTKEAEKMTNHIVSEETGCLECYRLLSAIYSKHELHEKALDAIDKALKLKPKDPKVISELFFTKGNQLREQNLLDKAFESYRAAVELNPDQAQAWMNMGGIQHIKGNYVSARAYYETALQLVPDSKLLQENLAKLDRLEKRLQEVREKDQT
SIO_010081: TMTC1
subclass of: SO_0000673
so part of: TMTC1
location: join(2357485..2357786,2377822..2377999,2386509..2386582,2389025..2389201,2465181..2465262,2467375..2467478,2479363..2479552,2502569..2502690,2517301..2517468,2527947..2528060,2543584..2543727,2561360..2561468,2577315..2577417,2579481..2579616,2580432..2580576,2581718..2581855,2583210..2583332,2585859..2585936,2590560..2590700)
location: region:2357485-2590700:1
so has part: feature:2357485-2357786:1:exon
so has part: feature:2377822-2377999:1:exon
so has part: feature:2386509-2386582:1:exon
so has part: feature:2389025-2389201:1:exon
so has part: feature:2465181-2465262:1:exon
so has part: feature:2467375-2467478:1:exon
so has part: feature:2479363-2479552:1:exon
so has part: feature:2502569-2502690:1:exon
so has part: feature:2517301-2517468:1:exon
so has part: feature:2527947-2528060:1:exon
so has part: feature:2543584-2543727:1:exon
so has part: feature:2561360-2561468:1:exon
so has part: feature:2577315-2577417:1:exon
so has part: feature:2579481-2579616:1:exon
so has part: feature:2580432-2580576:1:exon
so has part: feature:2581718-2581855:1:exon
so has part: feature:2583210-2583332:1:exon
so has part: feature:2585859-2585936:1:exon
so has part: feature:2590560-2590700:1:exon

XP_032329053.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2357485-2357786:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2377822-2377999:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2386509-2386582:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2389025-2389201:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2465181-2465262:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2467375-2467478:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2479363-2479552:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2502569-2502690:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2517301-2517468:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2527947-2528060:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2543584-2543727:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2561360-2561468:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2577315-2577417:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2579481-2579616:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2580432-2580576:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2581718-2581855:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:2583210-2583332:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:2585859-2585936:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:2590560-2590700:1:exon

TMTC1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 419612
gene: TMTC1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein O-mannosyl-transferase TMTC1 isoform X3
translation: MVVTGCARGGGGDRAPSRRRGCGLAPAGAAALLAGASCLCYGRSLRGEFVHDDVWAIVNNPDVRPGAPLHWGIFSNDFWGKGMAENTSHKSYRPLCVLTFKLNIFLTGMNPFYFHAVNVILHCLVTLVLMYTCDKTVFKNRGLAFVTALLFAVHPIHTEAVAGIVGRADVLACLLFLLAFLSYNRSVDQCCAGERVPPTASPFFLLLSLFLGTCAMLVKETGITVFGVCLVYDLFSLSHNHDKSSNGVLGARSPQPPGSAQPAHPPRENGKPQRPPHRGAWGGCHAPSPPEPKSSGFPVSPRAVRSLMRYWAGLVDSACFHQRASPAAQGRLQRYLTASSNRNFLLTMRPFLKRAILVISYVVVVLYFRLWIMGGSMPLFSEQDNPASFSPYILTRFLTYSYLLAFNVWLLLAPVTLCYDWQVGSIPLVETIWDMRNLATILLAVVMAVLSLHCLAAFKRLEHREVLAGLLFLVFPFIPASNLFFRVGFVVAERVLYMPSMGYCILVVHGLSKLCTWLNRCGATALSVSTVLLLLLFSWKTVKQNEIWLSRESLFRSGVQTLPHNAKVHYNYANFLKDQGRDREAIYHYRTALRLYPRHASALNNLGTLTRDTAEAKMYYQRALQLNPQHNRALFNLGNLLKSQEKKEEAITLLKDSIKYGPEFADAYSSLASLLAEQERFKEAEEIYQAGIKNCPDSSDLHNNYGVFLVDTGAPEKAVAHYQQAIRLSPSHHVAMVNLGRLCRSLGDNSEAEEWYKRALQVARRAEILAPLGALYYNTGRYEEALQVYREATALQPSQRELRLALAQVLAVMGQTKEAEKMTNHIVSEETGCLECYRLLSAIYSKHELHEKALDAIDKALKLKPKDPKVISELFFTKGNQLREQNLLDKAFEVKASEKRCALIETAWISGRHLSLLKPRG
SIO_010081: TMTC1
subclass of: SO_0000673
so part of: TMTC1
location: join(2357485..2357786,2377822..2377999,2386509..2386582,2389025..2389201,2393211..2393480,2465181..2465262,2467375..2467478,2479363..2479552,2502569..2502690,2517301..2517468,2527947..2528060,2543584..2543727,2561360..2561468,2577315..2577417,2579481..2579616,2580432..2580576,2581718..2581855,2583210..2583332,2585552..2585638)
location: region:2357485-2585638:1
so has part: feature:2357485-2357786:1:exon
so has part: feature:2377822-2377999:1:exon
so has part: feature:2386509-2386582:1:exon
so has part: feature:2389025-2389201:1:exon
so has part: feature:2393211-2393480:1:exon
so has part: feature:2465181-2465262:1:exon
so has part: feature:2467375-2467478:1:exon
so has part: feature:2479363-2479552:1:exon
so has part: feature:2502569-2502690:1:exon
so has part: feature:2517301-2517468:1:exon
so has part: feature:2527947-2528060:1:exon
so has part: feature:2543584-2543727:1:exon
so has part: feature:2561360-2561468:1:exon
so has part: feature:2577315-2577417:1:exon
so has part: feature:2579481-2579616:1:exon
so has part: feature:2580432-2580576:1:exon
so has part: feature:2581718-2581855:1:exon
so has part: feature:2583210-2583332:1:exon
so has part: feature:2585552-2585638:1:exon

XP_032329052.1
type: Protein
SIO_000068: ncbiprotein

position:2585638:1
position: 2585638
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2357485-2357786:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2377822-2377999:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2386509-2386582:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2389025-2389201:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2393211-2393480:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2465181-2465262:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2467375-2467478:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2479363-2479552:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2502569-2502690:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2517301-2517468:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2527947-2528060:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2543584-2543727:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2561360-2561468:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2577315-2577417:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2579481-2579616:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2580432-2580576:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:2581718-2581855:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:2583210-2583332:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:2585552-2585638:1:exon

TMTC1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 419612
gene: TMTC1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein O-mannosyl-transferase TMTC1 isoform X6
translation: MNPFYFHAVNVILHCLVTLVLMYTCDKTVFKNRGLAFVTALLFAVHPIHTEAVAGIVGRADVLACLLFLLAFLSYNRSVDQCCAGERVPPTASPFFLLLSLFLGTCAMLVKETGITVFGVCLVYDLFSLSHNHDKSSNGVLGARSPQPPGSAQPAHPPRENGKPQRPPHRGAWGGCHAPSPPEPKSSGFPVSPRAVRSLMRYWAGLVDSACFHQRASPAAQGRLQRYLTASSNRNFLLTMRPFLKRAILVISYVVVVLYFRLWIMGGSMPLFSEQDNPASFSPYILTRFLTYSYLLAFNVWLLLAPVTLCYDWQVGSIPLVETIWDMRNLATILLAVVMAVLSLHCLAAFKRLEHREVLAGLLFLVFPFIPASNLFFRVGFVVAERVLYMPSMGYCILVVHGLSKLCTWLNRCGATALSVSTVLLLLLFSWKTVKQNEIWLSRESLFRSGVQTLPHNAKVHYNYANFLKDQGRDREAIYHYRTALRLYPRHASALNNLGTLTRDTAEAKMYYQRALQLNPQHNRALFNLGNLLKSQEKKEEAITLLKDSIKYGPEFADAYSSLASLLAEQERFKEAEEIYQAGIKNCPDSSDLHNNYGVFLVDTGAPEKAVAHYQQAIRLSPSHHVAMVNLGRLCRSLGDNSEAEEWYKRALQVARRAEILAPLGALYYNTGRYEEALQVYREATALQPSQRELRLALAQVLAVMGQTKEAEKMTNHIVSEETGCLECYRLLSAIYSKHELHEKALDAIDKALKLKPKDPKVISELFFTKGNQLREQNLLDKAFESYRAAVELNPDQAQAWMNMGGIQHIKGNYVSARAYYETALQLVPDSKLLQENLAKLDRLEKRLQEVREKDQT
SIO_010081: TMTC1
subclass of: SO_0000673
so part of: TMTC1
location: join(2377844..2377999,2386509..2386582,2389025..2389201,2393211..2393480,2465181..2465262,2467375..2467478,2479363..2479552,2502569..2502690,2517301..2517468,2527947..2528060,2543584..2543727,2561360..2561468,2577315..2577417,2579481..2579616,2580432..2580576,2581718..2581855,2583210..2583332,2585859..2585936,2590560..2590700)
location: region:2377844-2590700:1
so has part: feature:2377844-2377999:1:exon
so has part: feature:2386509-2386582:1:exon
so has part: feature:2389025-2389201:1:exon
so has part: feature:2393211-2393480:1:exon
so has part: feature:2465181-2465262:1:exon
so has part: feature:2467375-2467478:1:exon
so has part: feature:2479363-2479552:1:exon
so has part: feature:2502569-2502690:1:exon
so has part: feature:2517301-2517468:1:exon
so has part: feature:2527947-2528060:1:exon
so has part: feature:2543584-2543727:1:exon
so has part: feature:2561360-2561468:1:exon
so has part: feature:2577315-2577417:1:exon
so has part: feature:2579481-2579616:1:exon
so has part: feature:2580432-2580576:1:exon
so has part: feature:2581718-2581855:1:exon
so has part: feature:2583210-2583332:1:exon
so has part: feature:2585859-2585936:1:exon
so has part: feature:2590560-2590700:1:exon

XP_032329055.1
type: Protein
SIO_000068: ncbiprotein

position:2377844:1
position: 2377844
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2377844-2377999:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2386509-2386582:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2389025-2389201:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2393211-2393480:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2465181-2465262:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2467375-2467478:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2479363-2479552:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2502569-2502690:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2517301-2517468:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2527947-2528060:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2543584-2543727:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2561360-2561468:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2577315-2577417:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2579481-2579616:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2580432-2580576:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2581718-2581855:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:2583210-2583332:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:2585859-2585936:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:2590560-2590700:1:exon

LOC116661321
type: Gene
subclass of: SO_0000704
RO_0002162: 419612
gene: LOC116661321
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2483909..2492095
location: region:2483909-2492095:1
so has part: feature:2483909-2492095:1:exon
subclass of: SO_0000011

116661321
type: Gene
SIO_000068: ncbigene

position:2483909:1
position: 2483909
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2492095:1
position: 2492095
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2483909-2492095:1:exon

LOC116661321
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 419612
nc RNA class: lncRNA
gene: LOC116661321
product: uncharacterized LOC116661321
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XR_004317198.1
SIO_010081: LOC116661321
subclass of: SO_0000673
so part of: LOC116661321
location: join(2483909..2489164,2490643..2492095)
location: region:2483909-2492095:1
so has part: feature:2483909-2489164:1:exon
so has part: feature:2490643-2492095:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2483909-2489164:1:exon

position:2489164:1
position: 2489164
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2490643-2492095:1:exon

position:2490643:1
position: 2490643
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC116661393
type: Gene
subclass of: SO_0000704
RO_0002162: 419612
gene: LOC116661393
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: complement(2564525..2564630)
location: region:2564525-2564630:-1
so has part: feature:2564525-2564630:-1:exon
subclass of: SO_0000623

116661393
type: Gene
SIO_000068: ncbigene

position:2564525:-1
position: 2564525
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2564630:-1
position: 2564630
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2564525-2564630:-1:exon

LOC116661393
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 419612
nc RNA class: snRNA
gene: LOC116661393
product: U6 spliceosomal RNA
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00026
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_004317284.1
SIO_010081: LOC116661393
subclass of: SO_0000673
so part of: LOC116661393
location: complement(2564525..2564630)
location: region:2564525-2564630:-1
so has part: feature:2564525-2564630:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2564525-2564630:-1:exon

ERGIC2
type: Gene
subclass of: SO_0000704
RO_0002162: 419612
gene: ERGIC2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2654753..2685732
location: region:2654753-2685732:1
so has part: feature:2654753-2685732:1:exon
subclass of: SO_0000010

102505259
type: Gene
SIO_000068: ncbigene

position:2654753:1
position: 2654753
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2685732:1
position: 2685732
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2654753-2685732:1:exon

ERGIC2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 419612
gene: ERGIC2
product: ERGIC and golgi 2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 mRNAs, 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 39 samples with support for all annotated introns
transcript id: XM_006194067.2
SIO_010081: ERGIC2
subclass of: SO_0000673
so part of: ERGIC2
location: join(2654753..2654863,2659737..2659879,2661469..2661577,2663480..2663526,2664765..2664835,2670663..2670703,2673493..2673594,2674923..2675018,2676883..2676938,2677982..2678080,2681064..2681161,2682739..2682901,2683978..2684060,2684222..2685732)
location: region:2654753-2685732:1
so has part: feature:2654753-2654863:1:exon
so has part: feature:2659737-2659879:1:exon
so has part: feature:2661469-2661577:1:exon
so has part: feature:2663480-2663526:1:exon
so has part: feature:2664765-2664835:1:exon
so has part: feature:2670663-2670703:1:exon
so has part: feature:2673493-2673594:1:exon
so has part: feature:2674923-2675018:1:exon
so has part: feature:2676883-2676938:1:exon
so has part: feature:2677982-2678080:1:exon
so has part: feature:2681064-2681161:1:exon
so has part: feature:2682739-2682901:1:exon
so has part: feature:2683978-2684060:1:exon
so has part: feature:2684222-2685732:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2654753-2654863:1:exon

position:2654863:1
position: 2654863
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2659737-2659879:1:exon

position:2659737:1
position: 2659737
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2659879:1
position: 2659879
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2661469-2661577:1:exon

position:2661469:1
position: 2661469
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2661577:1
position: 2661577
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2663480-2663526:1:exon

position:2663480:1
position: 2663480
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2663526:1
position: 2663526
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2664765-2664835:1:exon

position:2664765:1
position: 2664765
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2664835:1
position: 2664835
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2670663-2670703:1:exon

position:2670663:1
position: 2670663
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2670703:1
position: 2670703
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:2673493-2673594:1:exon

position:2673493:1
position: 2673493
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2673594:1
position: 2673594
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:2674923-2675018:1:exon

position:2674923:1
position: 2674923
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2675018:1
position: 2675018
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:2676883-2676938:1:exon

position:2676883:1
position: 2676883
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2676938:1
position: 2676938
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:2677982-2678080:1:exon

position:2677982:1
position: 2677982
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2678080:1
position: 2678080
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:2681064-2681161:1:exon

position:2681064:1
position: 2681064
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2681161:1
position: 2681161
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:2682739-2682901:1:exon

position:2682739:1
position: 2682739
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2682901:1
position: 2682901
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:2683978-2684060:1:exon

position:2683978:1
position: 2683978
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2684060:1
position: 2684060
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:2684222-2685732:1:exon

position:2684222:1
position: 2684222
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

ERGIC2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 419612
gene: ERGIC2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: endoplasmic reticulum-Golgi intermediate compartment protein 2
translation: MRRLNRKKTLSLVRELDAFPKVPDSYVETSASGGTVSLIAFTTMALLTIMEFSVYQDTWMKYEYEVDKDFSSKLRINIDVTVAMKCQYVGADVLDLAETMVASADGLVYEPAIFDLSPQQKEWQRMLQLIQSRLQEEHSLQDVIFKSAFKSASTALPPREDDSSQPPDACRIHGHLYVNKVAGNFHITVGKAIPHPRGHAHLAALVNHDSYNFSHRIDHLSFGEPVPGIINPLDGTEKIALDHNQMFQYFITVVPTRLHTYKISADTHQFSVTERERVINHAAGSHGVSGIFMKYDLSSLMVTVTEEHMPFWQFFVRLCGIVGGIFSTTGMLHGIGKFIVEIIYCRFRLGAYKPVNSVPFEDGHTDNHLPLLENNTH
SIO_010081: ERGIC2
subclass of: SO_0000673
so part of: ERGIC2
location: join(2659774..2659879,2661469..2661577,2663480..2663526,2664765..2664835,2670663..2670703,2673493..2673594,2674923..2675018,2676883..2676938,2677982..2678080,2681064..2681161,2682739..2682901,2683978..2684060,2684222..2684284)
location: region:2659774-2684284:1
so has part: feature:2659774-2659879:1:exon
so has part: feature:2661469-2661577:1:exon
so has part: feature:2663480-2663526:1:exon
so has part: feature:2664765-2664835:1:exon
so has part: feature:2670663-2670703:1:exon
so has part: feature:2673493-2673594:1:exon
so has part: feature:2674923-2675018:1:exon
so has part: feature:2676883-2676938:1:exon
so has part: feature:2677982-2678080:1:exon
so has part: feature:2681064-2681161:1:exon
so has part: feature:2682739-2682901:1:exon
so has part: feature:2683978-2684060:1:exon
so has part: feature:2684222-2684284:1:exon

XP_006194129.1
type: Protein
SIO_000068: ncbiprotein

position:2659774:1
position: 2659774
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2684284:1
position: 2684284
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2659774-2659879:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2661469-2661577:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2663480-2663526:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2664765-2664835:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2670663-2670703:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2673493-2673594:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2674923-2675018:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2676883-2676938:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2677982-2678080:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2681064-2681161:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2682739-2682901:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2683978-2684060:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2684222-2684284:1:exon

FAR2
type: Gene
subclass of: SO_0000704
RO_0002162: 419612
gene: FAR2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2688713..2812545)
location: region:2688713-2812545:-1
so has part: feature:2688713-2812545:-1:exon
subclass of: SO_0000010

102505508
type: Gene
SIO_000068: ncbigene

position:2688713:-1
position: 2688713
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2812545:-1
position: 2812545
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2688713-2812545:-1:exon

FAR2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 419612
gene: FAR2
product: fatty acyl-CoA reductase 2, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 14 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
transcript id: XM_032473403.1
SIO_010081: FAR2
subclass of: SO_0000673
so part of: FAR2
location: complement(join(2688713..2691143,2692116..2692243,2694818..2694947,2697477..2697648,2699765..2699832,2700711..2700829,2702655..2702699,2704091..2704268,2713881..2714060,2717009..2717184,2730480..2730668))
location: region:2688713-2730668:-1
so has part: feature:2730480-2730668:-1:exon
so has part: feature:2717009-2717184:-1:exon
so has part: feature:2713881-2714060:-1:exon
so has part: feature:2704091-2704268:-1:exon
so has part: feature:2702655-2702699:-1:exon
so has part: feature:2700711-2700829:-1:exon
so has part: feature:2699765-2699832:-1:exon
so has part: feature:2697477-2697648:-1:exon
so has part: feature:2694818-2694947:-1:exon
so has part: feature:2692116-2692243:-1:exon
so has part: feature:2688713-2691143:-1:exon

position:2730668:-1
position: 2730668
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2730480-2730668:-1:exon

position:2730480:-1
position: 2730480
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2717009-2717184:-1:exon

position:2717009:-1
position: 2717009
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2717184:-1
position: 2717184
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2713881-2714060:-1:exon

position:2713881:-1
position: 2713881
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2714060:-1
position: 2714060
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2704091-2704268:-1:exon

position:2704091:-1
position: 2704091
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2704268:-1
position: 2704268
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2702655-2702699:-1:exon

position:2702655:-1
position: 2702655
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2702699:-1
position: 2702699
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2700711-2700829:-1:exon

position:2700711:-1
position: 2700711
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2700829:-1
position: 2700829
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:2699765-2699832:-1:exon

position:2699765:-1
position: 2699765
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2699832:-1
position: 2699832
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:2697477-2697648:-1:exon

position:2697477:-1
position: 2697477
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2697648:-1
position: 2697648
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:2694818-2694947:-1:exon

position:2694818:-1
position: 2694818
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2694947:-1
position: 2694947
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:2692116-2692243:-1:exon

position:2692116:-1
position: 2692116
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2692243:-1
position: 2692243
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:2688713-2691143:-1:exon

position:2691143:-1
position: 2691143
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

FAR2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 419612
gene: FAR2
product: fatty acyl-CoA reductase 2, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 14 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_032473402.1
SIO_010081: FAR2
subclass of: SO_0000673
so part of: FAR2
location: complement(join(2690981..2691143,2692116..2692243,2694818..2694947,2697477..2697648,2699765..2699832,2700711..2700829,2702655..2702699,2704091..2704268,2713881..2714060,2717009..2717184,2730480..2730708,2812293..2812544))
location: region:2690981-2812544:-1
so has part: feature:2812293-2812544:-1:exon
so has part: feature:2730480-2730708:-1:exon
so has part: feature:2717009-2717184:-1:exon
so has part: feature:2713881-2714060:-1:exon
so has part: feature:2704091-2704268:-1:exon
so has part: feature:2702655-2702699:-1:exon
so has part: feature:2700711-2700829:-1:exon
so has part: feature:2699765-2699832:-1:exon
so has part: feature:2697477-2697648:-1:exon
so has part: feature:2694818-2694947:-1:exon
so has part: feature:2692116-2692243:-1:exon
so has part: feature:2690981-2691143:-1:exon

position:2690981:-1
position: 2690981
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2812544:-1
position: 2812544
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2812293-2812544:-1:exon

position:2812293:-1
position: 2812293
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2730480-2730708:-1:exon

position:2730708:-1
position: 2730708
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2717009-2717184:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2713881-2714060:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2704091-2704268:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2702655-2702699:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2700711-2700829:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2699765-2699832:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2697477-2697648:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2694818-2694947:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2692116-2692243:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2690981-2691143:-1:exon

FAR2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 419612
gene: FAR2
product: fatty acyl-CoA reductase 2, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 14 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_032473401.1
SIO_010081: FAR2
subclass of: SO_0000673
so part of: FAR2
location: complement(join(2690981..2691143,2692116..2692243,2694818..2694947,2697477..2697648,2699765..2699832,2700711..2700829,2702655..2702699,2704091..2704268,2713881..2714060,2717009..2717184,2730480..2730708,2811654..2812544))
location: region:2690981-2812544:-1
so has part: feature:2811654-2812544:-1:exon
so has part: feature:2730480-2730708:-1:exon
so has part: feature:2717009-2717184:-1:exon
so has part: feature:2713881-2714060:-1:exon
so has part: feature:2704091-2704268:-1:exon
so has part: feature:2702655-2702699:-1:exon
so has part: feature:2700711-2700829:-1:exon
so has part: feature:2699765-2699832:-1:exon
so has part: feature:2697477-2697648:-1:exon
so has part: feature:2694818-2694947:-1:exon
so has part: feature:2692116-2692243:-1:exon
so has part: feature:2690981-2691143:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2811654-2812544:-1:exon

position:2811654:-1
position: 2811654
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2730480-2730708:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2717009-2717184:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2713881-2714060:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2704091-2704268:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2702655-2702699:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2700711-2700829:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2699765-2699832:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2697477-2697648:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2694818-2694947:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2692116-2692243:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2690981-2691143:-1:exon

FAR2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 419612
gene: FAR2
product: fatty acyl-CoA reductase 2, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 14 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_014567168.2
SIO_010081: FAR2
subclass of: SO_0000673
so part of: FAR2
location: complement(join(2690981..2691143,2692116..2692243,2694818..2694947,2697477..2697648,2699765..2699832,2700711..2700829,2702655..2702699,2704091..2704268,2713881..2714060,2717009..2717184,2730480..2730708,2754894..2755060))
location: region:2690981-2755060:-1
so has part: feature:2754894-2755060:-1:exon
so has part: feature:2730480-2730708:-1:exon
so has part: feature:2717009-2717184:-1:exon
so has part: feature:2713881-2714060:-1:exon
so has part: feature:2704091-2704268:-1:exon
so has part: feature:2702655-2702699:-1:exon
so has part: feature:2700711-2700829:-1:exon
so has part: feature:2699765-2699832:-1:exon
so has part: feature:2697477-2697648:-1:exon
so has part: feature:2694818-2694947:-1:exon
so has part: feature:2692116-2692243:-1:exon
so has part: feature:2690981-2691143:-1:exon

position:2755060:-1
position: 2755060
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2754894-2755060:-1:exon

position:2754894:-1
position: 2754894
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2730480-2730708:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2717009-2717184:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2713881-2714060:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2704091-2704268:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2702655-2702699:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2700711-2700829:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2699765-2699832:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2697477-2697648:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2694818-2694947:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2692116-2692243:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2690981-2691143:-1:exon

FAR2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 419612
gene: FAR2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: fatty acyl-CoA reductase 2 isoform X1
translation: MSMISAFYNGKSILITGATGFLGKVMMEKLLRTSPDLKVIYILVRPKAGQTLQQRVFQILNSKLFEKVKEVCPKVHEKIRAISADLNQHDLAISKEDMQELLSHTNIIFHCAATVRFDDHLRHAVQLNVTATQQLLSIASQMPKLEAFIHISTAFANCNLKHIDEVIYPCAVEPKKIIDSMEWLDDAIIDEITPKLIGDRPNTYTYTKALGEMVLQQEGGNLNIAIIRPSIVGATWQEPFPGWIDSINGPTGLIVAAGKGFLRSIRATPMAVADLIPVDLVINLTLAVGWYTAVHRPKSTLIYHCTSGNLNPCHWGKMGFQVLATFEKIPFEKAFRRPNADFTTNNITTHYWNAVSHRVPAIIYDVYLRLTGRKPRMTKVMNRLLRTLSMLEYFINRSWEWSTYNTEMLMSELSPEDQRVFNFDVRQLNWLEYIENYVLGVKKYLLKEDMAGIPEARQHLKRLRNIHYLFNTALFLIAWRLLIARSQVARNVWFFIVSFCYKLLSYFRASSRLKV
SIO_010081: FAR2
subclass of: SO_0000673
so part of: FAR2
location: complement(join(2690981..2691143,2692116..2692243,2694818..2694947,2697477..2697648,2699765..2699832,2700711..2700829,2702655..2702699,2704091..2704268,2713881..2714060,2717009..2717184,2730480..2730668))
location: region:2690981-2730668:-1
so has part: feature:2730480-2730668:-1:exon
so has part: feature:2717009-2717184:-1:exon
so has part: feature:2713881-2714060:-1:exon
so has part: feature:2704091-2704268:-1:exon
so has part: feature:2702655-2702699:-1:exon
so has part: feature:2700711-2700829:-1:exon
so has part: feature:2699765-2699832:-1:exon
so has part: feature:2697477-2697648:-1:exon
so has part: feature:2694818-2694947:-1:exon
so has part: feature:2692116-2692243:-1:exon
so has part: feature:2690981-2691143:-1:exon

XP_032329292.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2730480-2730668:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2717009-2717184:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2713881-2714060:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2704091-2704268:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2702655-2702699:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2700711-2700829:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2699765-2699832:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2697477-2697648:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2694818-2694947:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2692116-2692243:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2690981-2691143:-1:exon

FAR2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 419612
gene: FAR2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: fatty acyl-CoA reductase 2 isoform X1
translation: MSMISAFYNGKSILITGATGFLGKVMMEKLLRTSPDLKVIYILVRPKAGQTLQQRVFQILNSKLFEKVKEVCPKVHEKIRAISADLNQHDLAISKEDMQELLSHTNIIFHCAATVRFDDHLRHAVQLNVTATQQLLSIASQMPKLEAFIHISTAFANCNLKHIDEVIYPCAVEPKKIIDSMEWLDDAIIDEITPKLIGDRPNTYTYTKALGEMVLQQEGGNLNIAIIRPSIVGATWQEPFPGWIDSINGPTGLIVAAGKGFLRSIRATPMAVADLIPVDLVINLTLAVGWYTAVHRPKSTLIYHCTSGNLNPCHWGKMGFQVLATFEKIPFEKAFRRPNADFTTNNITTHYWNAVSHRVPAIIYDVYLRLTGRKPRMTKVMNRLLRTLSMLEYFINRSWEWSTYNTEMLMSELSPEDQRVFNFDVRQLNWLEYIENYVLGVKKYLLKEDMAGIPEARQHLKRLRNIHYLFNTALFLIAWRLLIARSQVARNVWFFIVSFCYKLLSYFRASSRLKV
SIO_010081: FAR2
subclass of: SO_0000673
so part of: FAR2
location: complement(join(2690981..2691143,2692116..2692243,2694818..2694947,2697477..2697648,2699765..2699832,2700711..2700829,2702655..2702699,2704091..2704268,2713881..2714060,2717009..2717184,2730480..2730668))
location: region:2690981-2730668:-1
so has part: feature:2730480-2730668:-1:exon
so has part: feature:2717009-2717184:-1:exon
so has part: feature:2713881-2714060:-1:exon
so has part: feature:2704091-2704268:-1:exon
so has part: feature:2702655-2702699:-1:exon
so has part: feature:2700711-2700829:-1:exon
so has part: feature:2699765-2699832:-1:exon
so has part: feature:2697477-2697648:-1:exon
so has part: feature:2694818-2694947:-1:exon
so has part: feature:2692116-2692243:-1:exon
so has part: feature:2690981-2691143:-1:exon

XP_032329293.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2730480-2730668:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2717009-2717184:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2713881-2714060:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2704091-2704268:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2702655-2702699:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2700711-2700829:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2699765-2699832:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2697477-2697648:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2694818-2694947:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2692116-2692243:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2690981-2691143:-1:exon

FAR2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 419612
gene: FAR2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: fatty acyl-CoA reductase 2 isoform X1
translation: MSMISAFYNGKSILITGATGFLGKVMMEKLLRTSPDLKVIYILVRPKAGQTLQQRVFQILNSKLFEKVKEVCPKVHEKIRAISADLNQHDLAISKEDMQELLSHTNIIFHCAATVRFDDHLRHAVQLNVTATQQLLSIASQMPKLEAFIHISTAFANCNLKHIDEVIYPCAVEPKKIIDSMEWLDDAIIDEITPKLIGDRPNTYTYTKALGEMVLQQEGGNLNIAIIRPSIVGATWQEPFPGWIDSINGPTGLIVAAGKGFLRSIRATPMAVADLIPVDLVINLTLAVGWYTAVHRPKSTLIYHCTSGNLNPCHWGKMGFQVLATFEKIPFEKAFRRPNADFTTNNITTHYWNAVSHRVPAIIYDVYLRLTGRKPRMTKVMNRLLRTLSMLEYFINRSWEWSTYNTEMLMSELSPEDQRVFNFDVRQLNWLEYIENYVLGVKKYLLKEDMAGIPEARQHLKRLRNIHYLFNTALFLIAWRLLIARSQVARNVWFFIVSFCYKLLSYFRASSRLKV
SIO_010081: FAR2
subclass of: SO_0000673
so part of: FAR2
location: complement(join(2690981..2691143,2692116..2692243,2694818..2694947,2697477..2697648,2699765..2699832,2700711..2700829,2702655..2702699,2704091..2704268,2713881..2714060,2717009..2717184,2730480..2730668))
location: region:2690981-2730668:-1
so has part: feature:2730480-2730668:-1:exon
so has part: feature:2717009-2717184:-1:exon
so has part: feature:2713881-2714060:-1:exon
so has part: feature:2704091-2704268:-1:exon
so has part: feature:2702655-2702699:-1:exon
so has part: feature:2700711-2700829:-1:exon
so has part: feature:2699765-2699832:-1:exon
so has part: feature:2697477-2697648:-1:exon
so has part: feature:2694818-2694947:-1:exon
so has part: feature:2692116-2692243:-1:exon
so has part: feature:2690981-2691143:-1:exon

XP_032329294.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2730480-2730668:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2717009-2717184:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2713881-2714060:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2704091-2704268:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2702655-2702699:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2700711-2700829:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2699765-2699832:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2697477-2697648:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2694818-2694947:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2692116-2692243:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2690981-2691143:-1:exon

FAR2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 419612
gene: FAR2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: fatty acyl-CoA reductase 2 isoform X1
translation: MSMISAFYNGKSILITGATGFLGKVMMEKLLRTSPDLKVIYILVRPKAGQTLQQRVFQILNSKLFEKVKEVCPKVHEKIRAISADLNQHDLAISKEDMQELLSHTNIIFHCAATVRFDDHLRHAVQLNVTATQQLLSIASQMPKLEAFIHISTAFANCNLKHIDEVIYPCAVEPKKIIDSMEWLDDAIIDEITPKLIGDRPNTYTYTKALGEMVLQQEGGNLNIAIIRPSIVGATWQEPFPGWIDSINGPTGLIVAAGKGFLRSIRATPMAVADLIPVDLVINLTLAVGWYTAVHRPKSTLIYHCTSGNLNPCHWGKMGFQVLATFEKIPFEKAFRRPNADFTTNNITTHYWNAVSHRVPAIIYDVYLRLTGRKPRMTKVMNRLLRTLSMLEYFINRSWEWSTYNTEMLMSELSPEDQRVFNFDVRQLNWLEYIENYVLGVKKYLLKEDMAGIPEARQHLKRLRNIHYLFNTALFLIAWRLLIARSQVARNVWFFIVSFCYKLLSYFRASSRLKV
SIO_010081: FAR2
subclass of: SO_0000673
so part of: FAR2
location: complement(join(2690981..2691143,2692116..2692243,2694818..2694947,2697477..2697648,2699765..2699832,2700711..2700829,2702655..2702699,2704091..2704268,2713881..2714060,2717009..2717184,2730480..2730668))
location: region:2690981-2730668:-1
so has part: feature:2730480-2730668:-1:exon
so has part: feature:2717009-2717184:-1:exon
so has part: feature:2713881-2714060:-1:exon
so has part: feature:2704091-2704268:-1:exon
so has part: feature:2702655-2702699:-1:exon
so has part: feature:2700711-2700829:-1:exon
so has part: feature:2699765-2699832:-1:exon
so has part: feature:2697477-2697648:-1:exon
so has part: feature:2694818-2694947:-1:exon
so has part: feature:2692116-2692243:-1:exon
so has part: feature:2690981-2691143:-1:exon

XP_014422654.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2730480-2730668:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2717009-2717184:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2713881-2714060:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2704091-2704268:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2702655-2702699:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2700711-2700829:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2699765-2699832:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2697477-2697648:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2694818-2694947:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2692116-2692243:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2690981-2691143:-1:exon

FAR2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 419612
gene: FAR2
product: fatty acyl-CoA reductase 2, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_032473404.1
SIO_010081: FAR2
subclass of: SO_0000673
so part of: FAR2
location: complement(join(2691938..2692050,2692098..2692243,2694818..2694947,2697477..2697648,2699765..2699832,2700711..2700829,2702655..2702699,2704091..2704268,2713881..2714060,2717009..2717184,2730480..2730708,2811654..2812545))
location: region:2691938-2812545:-1
so has part: feature:2811654-2812545:-1:exon
so has part: feature:2730480-2730708:-1:exon
so has part: feature:2717009-2717184:-1:exon
so has part: feature:2713881-2714060:-1:exon
so has part: feature:2704091-2704268:-1:exon
so has part: feature:2702655-2702699:-1:exon
so has part: feature:2700711-2700829:-1:exon
so has part: feature:2699765-2699832:-1:exon
so has part: feature:2697477-2697648:-1:exon
so has part: feature:2694818-2694947:-1:exon
so has part: feature:2692098-2692243:-1:exon
so has part: feature:2691938-2692050:-1:exon

position:2691938:-1
position: 2691938
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2811654-2812545:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2730480-2730708:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2717009-2717184:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2713881-2714060:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2704091-2704268:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2702655-2702699:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2700711-2700829:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2699765-2699832:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2697477-2697648:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2694818-2694947:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2692098-2692243:-1:exon

position:2692098:-1
position: 2692098
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:2691938-2692050:-1:exon

position:2692050:-1
position: 2692050
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

FAR2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 419612
gene: FAR2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: fatty acyl-CoA reductase 2 isoform X2
translation: MSMISAFYNGKSILITGATGFLGKVMMEKLLRTSPDLKVIYILVRPKAGQTLQQRVFQILNSKLFEKVKEVCPKVHEKIRAISADLNQHDLAISKEDMQELLSHTNIIFHCAATVRFDDHLRHAVQLNVTATQQLLSIASQMPKLEAFIHISTAFANCNLKHIDEVIYPCAVEPKKIIDSMEWLDDAIIDEITPKLIGDRPNTYTYTKALGEMVLQQEGGNLNIAIIRPSIVGATWQEPFPGWIDSINGPTGLIVAAGKGFLRSIRATPMAVADLIPVDLVINLTLAVGWYTAVHRPKSTLIYHCTSGNLNPCHWGKMGFQVLATFEKIPFEKAFRRPNADFTTNNITTHYWNAVSHRVPAIIYDVYLRLTGRKPRMTKVMNRLLRTLSMLEYFINRSWEWSTYNTEMLMSELSPEDQRVFNFDVRQLNWLEYIENYVLGVKKYLLKEDMAGIPEARQHLKR
SIO_010081: FAR2
subclass of: SO_0000673
so part of: FAR2
location: complement(join(2692112..2692243,2694818..2694947,2697477..2697648,2699765..2699832,2700711..2700829,2702655..2702699,2704091..2704268,2713881..2714060,2717009..2717184,2730480..2730668))
location: region:2692112-2730668:-1
so has part: feature:2730480-2730668:-1:exon
so has part: feature:2717009-2717184:-1:exon
so has part: feature:2713881-2714060:-1:exon
so has part: feature:2704091-2704268:-1:exon
so has part: feature:2702655-2702699:-1:exon
so has part: feature:2700711-2700829:-1:exon
so has part: feature:2699765-2699832:-1:exon
so has part: feature:2697477-2697648:-1:exon
so has part: feature:2694818-2694947:-1:exon
so has part: feature:2692112-2692243:-1:exon

XP_032329295.1
type: Protein
SIO_000068: ncbiprotein

position:2692112:-1
position: 2692112
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2730480-2730668:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2717009-2717184:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2713881-2714060:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2704091-2704268:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2702655-2702699:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2700711-2700829:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2699765-2699832:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2697477-2697648:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2694818-2694947:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2692112-2692243:-1:exon

LOC116661384
type: Gene
subclass of: SO_0000704
RO_0002162: 419612
gene: LOC116661384
note: Derived by automated computational analysis using gene prediction method: cmsearch.
pseudo: true
so part of: sequence
location: 2953832..2953927
location: region:2953832-2953927:1
so has part: feature:2953832-2953927:1:exon

116661384
type: Gene
SIO_000068: ncbigene

position:2953832:1
position: 2953832
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2953927:1
position: 2953927
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2953832-2953927:1:exon

LOC116661384
type: Exon
subclass of: SO_0000147
RO_0002162: 419612
gene: LOC116661384
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00026
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
pseudo: true
SIO_010081: LOC116661384
subclass of: SO_0000673
so part of: LOC116661384
location: 2953832..2953927
location: region:2953832-2953927:1
so has part: feature:2953832-2953927:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2953832-2953927:1:exon

LOC116661274
type: Gene
subclass of: SO_0000704
RO_0002162: 419612
gene: LOC116661274
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(3146670..3150008)
location: region:3146670-3150008:-1
so has part: feature:3146670-3150008:-1:exon
subclass of: SO_0000011

116661274
type: Gene
SIO_000068: ncbigene

position:3146670:-1
position: 3146670
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3150008:-1
position: 3150008
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3146670-3150008:-1:exon

LOC116661274
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 419612
nc RNA class: lncRNA
gene: LOC116661274
product: uncharacterized LOC116661274
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XR_004317097.1
SIO_010081: LOC116661274
subclass of: SO_0000673
so part of: LOC116661274
location: complement(join(3146670..3149125,3149943..3150008))
location: region:3146670-3150008:-1
so has part: feature:3149943-3150008:-1:exon
so has part: feature:3146670-3149125:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3149943-3150008:-1:exon

position:3149943:-1
position: 3149943
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3146670-3149125:-1:exon

position:3149125:-1
position: 3149125
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

TRNAA-GGC
type: Gene
subclass of: SO_0000704
RO_0002162: 419612
gene: TRNAA-GGC
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
so part of: sequence
location: 3212775..3212846
location: region:3212775-3212846:1
so has part: feature:3212775-3212846:1:exon
subclass of: SO_0000663

116661418
type: Gene
SIO_000068: ncbigene

position:3212775:1
position: 3212775
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3212846:1
position: 3212846
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3212775-3212846:1:exon

TRNAA-GGC
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 419612
gene: TRNAA-GGC
product: tRNA-Ala
inference: COORDINATES: profile:tRNAscan-SE:1.23
note: transfer RNA alanine (anticodon GGC); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:3212807..3212809,aa:Ala,seq:ggc)
SIO_010081: TRNAA-GGC
subclass of: SO_0000673
so part of: TRNAA-GGC
location: 3212775..3212846
location: region:3212775-3212846:1
so has part: feature:3212775-3212846:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3212775-3212846:1:exon

CCDC91
type: Gene
subclass of: SO_0000704
RO_0002162: 419612
gene: CCDC91
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(3225117..3450019)
location: region:3225117-3450019:-1
so has part: feature:3225117-3450019:-1:exon
subclass of: SO_0000010

102505776
type: Gene
SIO_000068: ncbigene

position:3225117:-1
position: 3225117
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3450019:-1
position: 3450019
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3225117-3450019:-1:exon

CCDC91
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 419612
gene: CCDC91
product: coiled-coil domain containing 91, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 24 samples with support for all annotated introns
transcript id: XM_032473293.1
SIO_010081: CCDC91
subclass of: SO_0000673
so part of: CCDC91
location: complement(join(3225117..3226214,3278600..3278713,3298635..3298811,3301758..3301826,3301910..3302002,3338574..3338681,3356492..3356569,3396098..3396202,3397173..3397376,3398776..3398933,3413693..3413771,3415966..3416008,3449875..3450019))
location: region:3225117-3450019:-1
so has part: feature:3449875-3450019:-1:exon
so has part: feature:3415966-3416008:-1:exon
so has part: feature:3413693-3413771:-1:exon
so has part: feature:3398776-3398933:-1:exon
so has part: feature:3397173-3397376:-1:exon
so has part: feature:3396098-3396202:-1:exon
so has part: feature:3356492-3356569:-1:exon
so has part: feature:3338574-3338681:-1:exon
so has part: feature:3301910-3302002:-1:exon
so has part: feature:3301758-3301826:-1:exon
so has part: feature:3298635-3298811:-1:exon
so has part: feature:3278600-3278713:-1:exon
so has part: feature:3225117-3226214:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3449875-3450019:-1:exon

position:3449875:-1
position: 3449875
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3415966-3416008:-1:exon

position:3415966:-1
position: 3415966
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3416008:-1
position: 3416008
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3413693-3413771:-1:exon

position:3413693:-1
position: 3413693
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3413771:-1
position: 3413771
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3398776-3398933:-1:exon

position:3398776:-1
position: 3398776
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3398933:-1
position: 3398933
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:3397173-3397376:-1:exon

position:3397173:-1
position: 3397173
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3397376:-1
position: 3397376
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:3396098-3396202:-1:exon

position:3396098:-1
position: 3396098
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3396202:-1
position: 3396202
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:3356492-3356569:-1:exon

position:3356492:-1
position: 3356492
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3356569:-1
position: 3356569
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:3338574-3338681:-1:exon

position:3338574:-1
position: 3338574
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3338681:-1
position: 3338681
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:3301910-3302002:-1:exon

position:3301910:-1
position: 3301910
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3302002:-1
position: 3302002
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:3301758-3301826:-1:exon

position:3301758:-1
position: 3301758
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3301826:-1
position: 3301826
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:3298635-3298811:-1:exon

position:3298635:-1
position: 3298635
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3298811:-1
position: 3298811
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:3278600-3278713:-1:exon

position:3278600:-1
position: 3278600
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3278713:-1
position: 3278713
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:3225117-3226214:-1:exon

position:3226214:-1
position: 3226214
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

CCDC91
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 419612
gene: CCDC91
product: coiled-coil domain containing 91, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 22 samples with support for all annotated introns
transcript id: XM_032473295.1
SIO_010081: CCDC91
subclass of: SO_0000673
so part of: CCDC91
location: complement(join(3225117..3226214,3278600..3278713,3298635..3298811,3301758..3301826,3301910..3302002,3356492..3356569,3396098..3396202,3397173..3397376,3398776..3398936,3413693..3413771,3415966..3416008,3449875..3450019))
location: region:3225117-3450019:-1
so has part: feature:3449875-3450019:-1:exon
so has part: feature:3415966-3416008:-1:exon
so has part: feature:3413693-3413771:-1:exon
so has part: feature:3398776-3398936:-1:exon
so has part: feature:3397173-3397376:-1:exon
so has part: feature:3396098-3396202:-1:exon
so has part: feature:3356492-3356569:-1:exon
so has part: feature:3301910-3302002:-1:exon
so has part: feature:3301758-3301826:-1:exon
so has part: feature:3298635-3298811:-1:exon
so has part: feature:3278600-3278713:-1:exon
so has part: feature:3225117-3226214:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3449875-3450019:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3415966-3416008:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3413693-3413771:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3398776-3398936:-1:exon

position:3398936:-1
position: 3398936
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:3397173-3397376:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3396098-3396202:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3356492-3356569:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3301910-3302002:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3301758-3301826:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3298635-3298811:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3278600-3278713:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3225117-3226214:-1:exon

CCDC91
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 419612
gene: CCDC91
product: coiled-coil domain containing 91, transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 26 samples with support for all annotated introns
transcript id: XM_032473296.1
SIO_010081: CCDC91
subclass of: SO_0000673
so part of: CCDC91
location: complement(join(3225117..3226214,3298635..3298811,3301758..3301826,3301910..3302002,3338574..3338681,3356492..3356569,3396098..3396202,3397173..3397376,3398776..3398936,3413693..3413771,3415966..3416008,3449875..3450019))
location: region:3225117-3450019:-1
so has part: feature:3449875-3450019:-1:exon
so has part: feature:3415966-3416008:-1:exon
so has part: feature:3413693-3413771:-1:exon
so has part: feature:3398776-3398936:-1:exon
so has part: feature:3397173-3397376:-1:exon
so has part: feature:3396098-3396202:-1:exon
so has part: feature:3356492-3356569:-1:exon
so has part: feature:3338574-3338681:-1:exon
so has part: feature:3301910-3302002:-1:exon
so has part: feature:3301758-3301826:-1:exon
so has part: feature:3298635-3298811:-1:exon
so has part: feature:3225117-3226214:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3449875-3450019:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3415966-3416008:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3413693-3413771:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3398776-3398936:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3397173-3397376:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3396098-3396202:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3356492-3356569:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3338574-3338681:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3301910-3302002:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3301758-3301826:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3298635-3298811:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3225117-3226214:-1:exon

CCDC91
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 419612
gene: CCDC91
product: coiled-coil domain containing 91, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 mRNAs, 10 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 26 samples with support for all annotated introns
transcript id: XM_032473292.1
SIO_010081: CCDC91
subclass of: SO_0000673
so part of: CCDC91
location: complement(join(3225117..3226214,3278600..3278713,3298635..3298811,3301758..3301826,3301910..3302002,3338574..3338681,3356492..3356569,3396098..3396202,3397173..3397376,3398776..3398936,3413693..3413771,3415966..3416008,3449875..3450019))
location: region:3225117-3450019:-1
so has part: feature:3449875-3450019:-1:exon
so has part: feature:3415966-3416008:-1:exon
so has part: feature:3413693-3413771:-1:exon
so has part: feature:3398776-3398936:-1:exon
so has part: feature:3397173-3397376:-1:exon
so has part: feature:3396098-3396202:-1:exon
so has part: feature:3356492-3356569:-1:exon
so has part: feature:3338574-3338681:-1:exon
so has part: feature:3301910-3302002:-1:exon
so has part: feature:3301758-3301826:-1:exon
so has part: feature:3298635-3298811:-1:exon
so has part: feature:3278600-3278713:-1:exon
so has part: feature:3225117-3226214:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3449875-3450019:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3415966-3416008:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3413693-3413771:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3398776-3398936:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3397173-3397376:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3396098-3396202:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3356492-3356569:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3338574-3338681:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3301910-3302002:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3301758-3301826:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3298635-3298811:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3278600-3278713:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3225117-3226214:-1:exon

CCDC91
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 419612
gene: CCDC91
product: coiled-coil domain containing 91, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 34 samples with support for all annotated introns
transcript id: XM_032473294.1
SIO_010081: CCDC91
subclass of: SO_0000673
so part of: CCDC91
location: complement(join(3225117..3226214,3278600..3278713,3298635..3298811,3301758..3301826,3301910..3302002,3338574..3338681,3356492..3356569,3396098..3396202,3397173..3397376,3398776..3398933,3399829..3399917,3413693..3413771,3415966..3416008))
location: region:3225117-3416008:-1
so has part: feature:3415966-3416008:-1:exon
so has part: feature:3413693-3413771:-1:exon
so has part: feature:3399829-3399917:-1:exon
so has part: feature:3398776-3398933:-1:exon
so has part: feature:3397173-3397376:-1:exon
so has part: feature:3396098-3396202:-1:exon
so has part: feature:3356492-3356569:-1:exon
so has part: feature:3338574-3338681:-1:exon
so has part: feature:3301910-3302002:-1:exon
so has part: feature:3301758-3301826:-1:exon
so has part: feature:3298635-3298811:-1:exon
so has part: feature:3278600-3278713:-1:exon
so has part: feature:3225117-3226214:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3415966-3416008:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3413693-3413771:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3399829-3399917:-1:exon

position:3399829:-1
position: 3399829
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3399917:-1
position: 3399917
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3398776-3398933:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3397173-3397376:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3396098-3396202:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3356492-3356569:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3338574-3338681:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3301910-3302002:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3301758-3301826:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3298635-3298811:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3278600-3278713:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3225117-3226214:-1:exon

CCDC91
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 419612
gene: CCDC91
product: coiled-coil domain containing 91, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 39 samples with support for all annotated introns
transcript id: XM_014567177.2
SIO_010081: CCDC91
subclass of: SO_0000673
so part of: CCDC91
location: complement(join(3225117..3226214,3278600..3278713,3298635..3298811,3301758..3301826,3301910..3302002,3338574..3338681,3356492..3356569,3396098..3396202,3397173..3397376,3398776..3398936,3399829..3399917,3413693..3413771,3415966..3416008))
location: region:3225117-3416008:-1
so has part: feature:3415966-3416008:-1:exon
so has part: feature:3413693-3413771:-1:exon
so has part: feature:3399829-3399917:-1:exon
so has part: feature:3398776-3398936:-1:exon
so has part: feature:3397173-3397376:-1:exon
so has part: feature:3396098-3396202:-1:exon
so has part: feature:3356492-3356569:-1:exon
so has part: feature:3338574-3338681:-1:exon
so has part: feature:3301910-3302002:-1:exon
so has part: feature:3301758-3301826:-1:exon
so has part: feature:3298635-3298811:-1:exon
so has part: feature:3278600-3278713:-1:exon
so has part: feature:3225117-3226214:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3415966-3416008:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3413693-3413771:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3399829-3399917:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3398776-3398936:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3397173-3397376:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3396098-3396202:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3356492-3356569:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3338574-3338681:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3301910-3302002:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3301758-3301826:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3298635-3298811:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3278600-3278713:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3225117-3226214:-1:exon

CCDC91
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 419612
gene: CCDC91
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: coiled-coil domain-containing protein 91 isoform X2
translation: MDDDDFGGFEAAEIFDGGNGETQTTSPAIPWAAFPTAGVHLSPASPEIVLDHDHTSPSVGCLSSEPIISSPENTHADNSIVGQTVPKAQIQQSTHTHLDISLFPLGLTDEKSNGTIAPVGDAEDPGANVSNIQLQQKIASLEMKLKVSEEEKQRIKKDVESLMEKHSVLEKDFLKEKEQEAISFQDRYKELQEKHKQELEDMRKAGHEALSIIVDEYKALLQSSVKQQVEAIEKQYISAVEKQAHKCEELLNTQHQRLLDMLDTEKELLKEKIKEALIQQSQEQKEILEKCLEEERQRNKEALVSAAKLEKEAMTEAVLKAIEEERKHLEKAHAEERELWKTEHAKDQEKVSQEIQKAIQEQRKISQETVKAAIIEEQKRSEKAVEEAVKRTRDELIEYVKEQKRLDQVIRQRSLSSLELFLSCAQKQLSALIATEPAGLE
SIO_010081: CCDC91
subclass of: SO_0000673
so part of: CCDC91
location: complement(join(3226104..3226214,3278600..3278713,3298635..3298811,3301758..3301826,3301910..3302002,3338574..3338681,3356492..3356569,3396098..3396202,3397173..3397376,3398776..3398933,3413693..3413771,3415966..3415995))
location: region:3226104-3415995:-1
so has part: feature:3415966-3415995:-1:exon
so has part: feature:3413693-3413771:-1:exon
so has part: feature:3398776-3398933:-1:exon
so has part: feature:3397173-3397376:-1:exon
so has part: feature:3396098-3396202:-1:exon
so has part: feature:3356492-3356569:-1:exon
so has part: feature:3338574-3338681:-1:exon
so has part: feature:3301910-3302002:-1:exon
so has part: feature:3301758-3301826:-1:exon
so has part: feature:3298635-3298811:-1:exon
so has part: feature:3278600-3278713:-1:exon
so has part: feature:3226104-3226214:-1:exon

XP_032329184.1
type: Protein
SIO_000068: ncbiprotein

position:3226104:-1
position: 3226104
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3415995:-1
position: 3415995
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3415966-3415995:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3413693-3413771:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3398776-3398933:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3397173-3397376:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3396098-3396202:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3356492-3356569:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3338574-3338681:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3301910-3302002:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3301758-3301826:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3298635-3298811:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3278600-3278713:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3226104-3226214:-1:exon

CCDC91
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 419612
gene: CCDC91
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: coiled-coil domain-containing protein 91 isoform X5
translation: MDDDDFGGFEAAEIFDGGNGETQTTSPAIPWAAFPTVAGVHLSPASPEIVLDHDHTSPSVGCLSSEPIISSPENTHADNSIVGQTVPKAQIQQSTHTHLDISLFPLGLTDEKSNGTIAPVGDAEDPGANVSNIQLQQKIASLEMKLKVSEEEKQRIKKDVESLMEKHSVLEKDFLKEKEQEAISFQDRYKELQEKHKQELEDMRKAGHEALSIIVDEYKHQRLLDMLDTEKELLKEKIKEALIQQSQEQKEILEKCLEEERQRNKEALVSAAKLEKEAMTEAVLKAIEEERKHLEKAHAEERELWKTEHAKDQEKVSQEIQKAIQEQRKISQETVKAAIIEEQKRSEKAVEEAVKRTRDELIEYVKEQKRLDQVIRQRSLSSLELFLSCAQKQLSALIATEPAGLE
SIO_010081: CCDC91
subclass of: SO_0000673
so part of: CCDC91
location: complement(join(3226104..3226214,3278600..3278713,3298635..3298811,3301758..3301826,3301910..3302002,3356492..3356569,3396098..3396202,3397173..3397376,3398776..3398936,3413693..3413771,3415966..3415995))
location: region:3226104-3415995:-1
so has part: feature:3415966-3415995:-1:exon
so has part: feature:3413693-3413771:-1:exon
so has part: feature:3398776-3398936:-1:exon
so has part: feature:3397173-3397376:-1:exon
so has part: feature:3396098-3396202:-1:exon
so has part: feature:3356492-3356569:-1:exon
so has part: feature:3301910-3302002:-1:exon
so has part: feature:3301758-3301826:-1:exon
so has part: feature:3298635-3298811:-1:exon
so has part: feature:3278600-3278713:-1:exon
so has part: feature:3226104-3226214:-1:exon

XP_032329186.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3415966-3415995:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3413693-3413771:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3398776-3398936:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3397173-3397376:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3396098-3396202:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3356492-3356569:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3301910-3302002:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3301758-3301826:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3298635-3298811:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3278600-3278713:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3226104-3226214:-1:exon

CCDC91
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 419612
gene: CCDC91
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: coiled-coil domain-containing protein 91 isoform X6
translation: MDDDDFGGFEAAEIFDGGNGETQTTSPAIPWAAFPTVAGVHLSPASPEIVLDHDHTSPSVGCLSSEPIISSPENTHADNSIVGQTVPKAQIQQSTHTHLDISLFPLGLTDEKSNGTIAPVGDAEDPGANVSNIQLQQKIASLEMKLKVSEEEKQRIKKDVESLMEKHSVLEKDFLKEKEQEAISFQDRYKELQEKHKQELEDMRKAGHEALSIIVDEYKALLQSSVKQQVEAIEKQYISAVEKQAHKCEELLNTQHQRLLDMLDTEKELLKEKIKEALIQQSQEQKEILEKCLEEERQRNKEALVSAAKLEKEAMTEAVLKAIEEERKHLEKAHAEERELWKTEHAKDQEKVSQEIQKAIQEQRKISQLDQVIRQRSLSSLELFLSCAQKQLSALIATEPAGLE
SIO_010081: CCDC91
subclass of: SO_0000673
so part of: CCDC91
location: complement(join(3226104..3226214,3298635..3298811,3301758..3301826,3301910..3302002,3338574..3338681,3356492..3356569,3396098..3396202,3397173..3397376,3398776..3398936,3413693..3413771,3415966..3415995))
location: region:3226104-3415995:-1
so has part: feature:3415966-3415995:-1:exon
so has part: feature:3413693-3413771:-1:exon
so has part: feature:3398776-3398936:-1:exon
so has part: feature:3397173-3397376:-1:exon
so has part: feature:3396098-3396202:-1:exon
so has part: feature:3356492-3356569:-1:exon
so has part: feature:3338574-3338681:-1:exon
so has part: feature:3301910-3302002:-1:exon
so has part: feature:3301758-3301826:-1:exon
so has part: feature:3298635-3298811:-1:exon
so has part: feature:3226104-3226214:-1:exon

XP_032329187.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3415966-3415995:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3413693-3413771:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3398776-3398936:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3397173-3397376:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3396098-3396202:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3356492-3356569:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3338574-3338681:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3301910-3302002:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3301758-3301826:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3298635-3298811:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3226104-3226214:-1:exon

CCDC91
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 419612
gene: CCDC91
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: coiled-coil domain-containing protein 91 isoform X1
translation: MDDDDFGGFEAAEIFDGGNGETQTTSPAIPWAAFPTVAGVHLSPASPEIVLDHDHTSPSVGCLSSEPIISSPENTHADNSIVGQTVPKAQIQQSTHTHLDISLFPLGLTDEKSNGTIAPVGDAEDPGANVSNIQLQQKIASLEMKLKVSEEEKQRIKKDVESLMEKHSVLEKDFLKEKEQEAISFQDRYKELQEKHKQELEDMRKAGHEALSIIVDEYKALLQSSVKQQVEAIEKQYISAVEKQAHKCEELLNTQHQRLLDMLDTEKELLKEKIKEALIQQSQEQKEILEKCLEEERQRNKEALVSAAKLEKEAMTEAVLKAIEEERKHLEKAHAEERELWKTEHAKDQEKVSQEIQKAIQEQRKISQETVKAAIIEEQKRSEKAVEEAVKRTRDELIEYVKEQKRLDQVIRQRSLSSLELFLSCAQKQLSALIATEPAGLE
SIO_010081: CCDC91
subclass of: SO_0000673
so part of: CCDC91
location: complement(join(3226104..3226214,3278600..3278713,3298635..3298811,3301758..3301826,3301910..3302002,3338574..3338681,3356492..3356569,3396098..3396202,3397173..3397376,3398776..3398936,3413693..3413771,3415966..3415995))
location: region:3226104-3415995:-1
so has part: feature:3415966-3415995:-1:exon
so has part: feature:3413693-3413771:-1:exon
so has part: feature:3398776-3398936:-1:exon
so has part: feature:3397173-3397376:-1:exon
so has part: feature:3396098-3396202:-1:exon
so has part: feature:3356492-3356569:-1:exon
so has part: feature:3338574-3338681:-1:exon
so has part: feature:3301910-3302002:-1:exon
so has part: feature:3301758-3301826:-1:exon
so has part: feature:3298635-3298811:-1:exon
so has part: feature:3278600-3278713:-1:exon
so has part: feature:3226104-3226214:-1:exon

XP_032329183.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3415966-3415995:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3413693-3413771:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3398776-3398936:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3397173-3397376:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3396098-3396202:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3356492-3356569:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3338574-3338681:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3301910-3302002:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3301758-3301826:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3298635-3298811:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3278600-3278713:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3226104-3226214:-1:exon

CCDC91
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 419612
gene: CCDC91
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: coiled-coil domain-containing protein 91 isoform X4
translation: MPKWNKAGVHLSPASPEIVLDHDHTSPSVGCLSSEPIISSPENTHADNSIVGQTVPKAQIQQSTHTHLDISLFPLGLTDEKSNGTIAPVGDAEDPGANVSNIQLQQKIASLEMKLKVSEEEKQRIKKDVESLMEKHSVLEKDFLKEKEQEAISFQDRYKELQEKHKQELEDMRKAGHEALSIIVDEYKALLQSSVKQQVEAIEKQYISAVEKQAHKCEELLNTQHQRLLDMLDTEKELLKEKIKEALIQQSQEQKEILEKCLEEERQRNKEALVSAAKLEKEAMTEAVLKAIEEERKHLEKAHAEERELWKTEHAKDQEKVSQEIQKAIQEQRKISQETVKAAIIEEQKRSEKAVEEAVKRTRDELIEYVKEQKRLDQVIRQRSLSSLELFLSCAQKQLSALIATEPAGLE
SIO_010081: CCDC91
subclass of: SO_0000673
so part of: CCDC91
location: complement(join(3226104..3226214,3278600..3278713,3298635..3298811,3301758..3301826,3301910..3302002,3338574..3338681,3356492..3356569,3396098..3396202,3397173..3397376,3398776..3398933,3399829..3399847))
location: region:3226104-3399847:-1
so has part: feature:3399829-3399847:-1:exon
so has part: feature:3398776-3398933:-1:exon
so has part: feature:3397173-3397376:-1:exon
so has part: feature:3396098-3396202:-1:exon
so has part: feature:3356492-3356569:-1:exon
so has part: feature:3338574-3338681:-1:exon
so has part: feature:3301910-3302002:-1:exon
so has part: feature:3301758-3301826:-1:exon
so has part: feature:3298635-3298811:-1:exon
so has part: feature:3278600-3278713:-1:exon
so has part: feature:3226104-3226214:-1:exon

XP_032329185.1
type: Protein
SIO_000068: ncbiprotein

position:3399847:-1
position: 3399847
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3399829-3399847:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3398776-3398933:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3397173-3397376:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3396098-3396202:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3356492-3356569:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3338574-3338681:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3301910-3302002:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3301758-3301826:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3298635-3298811:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3278600-3278713:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3226104-3226214:-1:exon

CCDC91
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 419612
gene: CCDC91
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: coiled-coil domain-containing protein 91 isoform X3
translation: MPKWNKVAGVHLSPASPEIVLDHDHTSPSVGCLSSEPIISSPENTHADNSIVGQTVPKAQIQQSTHTHLDISLFPLGLTDEKSNGTIAPVGDAEDPGANVSNIQLQQKIASLEMKLKVSEEEKQRIKKDVESLMEKHSVLEKDFLKEKEQEAISFQDRYKELQEKHKQELEDMRKAGHEALSIIVDEYKALLQSSVKQQVEAIEKQYISAVEKQAHKCEELLNTQHQRLLDMLDTEKELLKEKIKEALIQQSQEQKEILEKCLEEERQRNKEALVSAAKLEKEAMTEAVLKAIEEERKHLEKAHAEERELWKTEHAKDQEKVSQEIQKAIQEQRKISQETVKAAIIEEQKRSEKAVEEAVKRTRDELIEYVKEQKRLDQVIRQRSLSSLELFLSCAQKQLSALIATEPAGLE
SIO_010081: CCDC91
subclass of: SO_0000673
so part of: CCDC91
location: complement(join(3226104..3226214,3278600..3278713,3298635..3298811,3301758..3301826,3301910..3302002,3338574..3338681,3356492..3356569,3396098..3396202,3397173..3397376,3398776..3398936,3399829..3399847))
location: region:3226104-3399847:-1
so has part: feature:3399829-3399847:-1:exon
so has part: feature:3398776-3398936:-1:exon
so has part: feature:3397173-3397376:-1:exon
so has part: feature:3396098-3396202:-1:exon
so has part: feature:3356492-3356569:-1:exon
so has part: feature:3338574-3338681:-1:exon
so has part: feature:3301910-3302002:-1:exon
so has part: feature:3301758-3301826:-1:exon
so has part: feature:3298635-3298811:-1:exon
so has part: feature:3278600-3278713:-1:exon
so has part: feature:3226104-3226214:-1:exon

XP_014422663.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3399829-3399847:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3398776-3398936:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3397173-3397376:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3396098-3396202:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3356492-3356569:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3338574-3338681:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3301910-3302002:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3301758-3301826:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3298635-3298811:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3278600-3278713:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3226104-3226214:-1:exon

LOC116661353
type: Gene
subclass of: SO_0000704
RO_0002162: 419612
gene: LOC116661353
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(3378198..3385467)
location: region:3378198-3385467:-1
so has part: feature:3378198-3385467:-1:exon
subclass of: SO_0000011

116661353
type: Gene
SIO_000068: ncbigene

position:3378198:-1
position: 3378198
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3385467:-1
position: 3385467
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3378198-3385467:-1:exon

LOC116661353
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 419612
nc RNA class: lncRNA
gene: LOC116661353
product: uncharacterized LOC116661353
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XR_004317231.1
SIO_010081: LOC116661353
subclass of: SO_0000673
so part of: LOC116661353
location: complement(join(3378198..3378521,3381017..3381028,3385456..3385467))
location: region:3378198-3385467:-1
so has part: feature:3385456-3385467:-1:exon
so has part: feature:3381017-3381028:-1:exon
so has part: feature:3378198-3378521:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3385456-3385467:-1:exon

position:3385456:-1
position: 3385456
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3381017-3381028:-1:exon

position:3381017:-1
position: 3381017
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3381028:-1
position: 3381028
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3378198-3378521:-1:exon

position:3378521:-1
position: 3378521
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

PTHLH
type: Gene
subclass of: SO_0000704
RO_0002162: 419612
gene: PTHLH
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 3626720..3640803
location: region:3626720-3640803:1
so has part: feature:3626720-3640803:1:exon
subclass of: SO_0000010

102506032
type: Gene
SIO_000068: ncbigene

position:3626720:1
position: 3626720
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3640803:1
position: 3640803
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3626720-3640803:1:exon

PTHLH
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 419612
gene: PTHLH
product: parathyroid hormone like hormone, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 mRNAs, 19 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_014567135.2
SIO_010081: PTHLH
subclass of: SO_0000673
so part of: PTHLH
location: join(3626720..3626887,3629866..3629988,3635788..3636210,3640324..3640803)
location: region:3626720-3640803:1
so has part: feature:3626720-3626887:1:exon
so has part: feature:3629866-3629988:1:exon
so has part: feature:3635788-3636210:1:exon
so has part: feature:3640324-3640803:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3626720-3626887:1:exon

position:3626887:1
position: 3626887
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3629866-3629988:1:exon

position:3629866:1
position: 3629866
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3629988:1
position: 3629988
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3635788-3636210:1:exon

position:3635788:1
position: 3635788
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3636210:1
position: 3636210
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3640324-3640803:1:exon

position:3640324:1
position: 3640324
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

PTHLH
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 419612
gene: PTHLH
product: parathyroid hormone like hormone, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 mRNAs, 19 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_032473108.1
SIO_010081: PTHLH
subclass of: SO_0000673
so part of: PTHLH
location: join(3626721..3626887,3629095..3629347,3629866..3629988,3635788..3636210,3640324..3640803)
location: region:3626721-3640803:1
so has part: feature:3626721-3626887:1:exon
so has part: feature:3629095-3629347:1:exon
so has part: feature:3629866-3629988:1:exon
so has part: feature:3635788-3636210:1:exon
so has part: feature:3640324-3640803:1:exon

position:3626721:1
position: 3626721
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3626721-3626887:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3629095-3629347:1:exon

position:3629095:1
position: 3629095
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3629347:1
position: 3629347
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3629866-3629988:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3635788-3636210:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3640324-3640803:1:exon

PTHLH
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 419612
gene: PTHLH
product: parathyroid hormone like hormone, transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 21 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 11 samples with support for all annotated introns
transcript id: XM_014567137.2
SIO_010081: PTHLH
subclass of: SO_0000673
so part of: PTHLH
location: join(3627529..3628172,3629095..3629347,3629866..3629988,3635788..3636234,3640324..3640743)
location: region:3627529-3640743:1
so has part: feature:3627529-3628172:1:exon
so has part: feature:3629095-3629347:1:exon
so has part: feature:3629866-3629988:1:exon
so has part: feature:3635788-3636234:1:exon
so has part: feature:3640324-3640743:1:exon

position:3627529:1
position: 3627529
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3640743:1
position: 3640743
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3627529-3628172:1:exon

position:3628172:1
position: 3628172
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3629095-3629347:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3629866-3629988:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3635788-3636234:1:exon

position:3636234:1
position: 3636234
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:3640324-3640743:1:exon

PTHLH
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 419612
gene: PTHLH
product: parathyroid hormone like hormone, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 12 mRNAs, 19 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_032473109.1
SIO_010081: PTHLH
subclass of: SO_0000673
so part of: PTHLH
location: join(3628029..3628172,3629095..3629347,3629665..3629693,3629866..3629988,3635788..3636210,3640324..3640803)
location: region:3628029-3640803:1
so has part: feature:3628029-3628172:1:exon
so has part: feature:3629095-3629347:1:exon
so has part: feature:3629665-3629693:1:exon
so has part: feature:3629866-3629988:1:exon
so has part: feature:3635788-3636210:1:exon
so has part: feature:3640324-3640803:1:exon

position:3628029:1
position: 3628029
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3628029-3628172:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3629095-3629347:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3629665-3629693:1:exon

position:3629665:1
position: 3629665
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3629693:1
position: 3629693
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3629866-3629988:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3635788-3636210:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3640324-3640803:1:exon

PTHLH
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 419612
gene: PTHLH
product: parathyroid hormone like hormone, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 mRNAs, 19 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 11 samples with support for all annotated introns
transcript id: XM_014567132.2
SIO_010081: PTHLH
subclass of: SO_0000673
so part of: PTHLH
location: join(3628030..3628172,3629095..3629347,3629866..3629988,3635788..3636210,3640324..3640803)
location: region:3628030-3640803:1
so has part: feature:3628030-3628172:1:exon
so has part: feature:3629095-3629347:1:exon
so has part: feature:3629866-3629988:1:exon
so has part: feature:3635788-3636210:1:exon
so has part: feature:3640324-3640803:1:exon

position:3628030:1
position: 3628030
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3628030-3628172:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3629095-3629347:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3629866-3629988:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3635788-3636210:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3640324-3640803:1:exon

PTHLH
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 419612
gene: PTHLH
product: parathyroid hormone like hormone, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 mRNAs, 19 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_032473110.1
SIO_010081: PTHLH
subclass of: SO_0000673
so part of: PTHLH
location: join(3629404..3629569,3629866..3629988,3635788..3636210,3640324..3640803)
location: region:3629404-3640803:1
so has part: feature:3629404-3629569:1:exon
so has part: feature:3629866-3629988:1:exon
so has part: feature:3635788-3636210:1:exon
so has part: feature:3640324-3640803:1:exon

position:3629404:1
position: 3629404
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3629404-3629569:1:exon

position:3629569:1
position: 3629569
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3629866-3629988:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3635788-3636210:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3640324-3640803:1:exon

PTHLH
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 419612
gene: PTHLH
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: parathyroid hormone-related protein isoform X1
translation: MLWRLVQQWSVAVFLLSYSVPSCGRSVEELGRRLKRAVSEHQLLHDKGKSIQDLRRRFFLHHLIAEIHTAEIRATSEVSPNSKPAPNTKNHPVRFGSDDEGRYLTQETNKVETYKEQPLKTPGKKKKGKPGKRKEQEKKKRRTRSAWLTSGVAGSRLEGDHVSDISGTSLELDSRRH
SIO_010081: PTHLH
subclass of: SO_0000673
so part of: PTHLH
location: join(3629888..3629988,3635788..3636210,3640324..3640333)
location: region:3629888-3640333:1
so has part: feature:3629888-3629988:1:exon
so has part: feature:3635788-3636210:1:exon
so has part: feature:3640324-3640333:1:exon

XP_032328999.1
type: Protein
SIO_000068: ncbiprotein

position:3629888:1
position: 3629888
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3640333:1
position: 3640333
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3629888-3629988:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3635788-3636210:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3640324-3640333:1:exon

PTHLH
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 419612
gene: PTHLH
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: parathyroid hormone-related protein isoform X1
translation: MLWRLVQQWSVAVFLLSYSVPSCGRSVEELGRRLKRAVSEHQLLHDKGKSIQDLRRRFFLHHLIAEIHTAEIRATSEVSPNSKPAPNTKNHPVRFGSDDEGRYLTQETNKVETYKEQPLKTPGKKKKGKPGKRKEQEKKKRRTRSAWLTSGVAGSRLEGDHVSDISGTSLELDSRRH
SIO_010081: PTHLH
subclass of: SO_0000673
so part of: PTHLH
location: join(3629888..3629988,3635788..3636210,3640324..3640333)
location: region:3629888-3640333:1
so has part: feature:3629888-3629988:1:exon
so has part: feature:3635788-3636210:1:exon
so has part: feature:3640324-3640333:1:exon

XP_032329000.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3629888-3629988:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3635788-3636210:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3640324-3640333:1:exon

PTHLH
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 419612
gene: PTHLH
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: parathyroid hormone-related protein isoform X1
translation: MLWRLVQQWSVAVFLLSYSVPSCGRSVEELGRRLKRAVSEHQLLHDKGKSIQDLRRRFFLHHLIAEIHTAEIRATSEVSPNSKPAPNTKNHPVRFGSDDEGRYLTQETNKVETYKEQPLKTPGKKKKGKPGKRKEQEKKKRRTRSAWLTSGVAGSRLEGDHVSDISGTSLELDSRRH
SIO_010081: PTHLH
subclass of: SO_0000673
so part of: PTHLH
location: join(3629888..3629988,3635788..3636210,3640324..3640333)
location: region:3629888-3640333:1
so has part: feature:3629888-3629988:1:exon
so has part: feature:3635788-3636210:1:exon
so has part: feature:3640324-3640333:1:exon

XP_032329001.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3629888-3629988:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3635788-3636210:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3640324-3640333:1:exon

PTHLH
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 419612
gene: PTHLH
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: parathyroid hormone-related protein isoform X1
translation: MLWRLVQQWSVAVFLLSYSVPSCGRSVEELGRRLKRAVSEHQLLHDKGKSIQDLRRRFFLHHLIAEIHTAEIRATSEVSPNSKPAPNTKNHPVRFGSDDEGRYLTQETNKVETYKEQPLKTPGKKKKGKPGKRKEQEKKKRRTRSAWLTSGVAGSRLEGDHVSDISGTSLELDSRRH
SIO_010081: PTHLH
subclass of: SO_0000673
so part of: PTHLH
location: join(3629888..3629988,3635788..3636210,3640324..3640333)
location: region:3629888-3640333:1
so has part: feature:3629888-3629988:1:exon
so has part: feature:3635788-3636210:1:exon
so has part: feature:3640324-3640333:1:exon

XP_014422618.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3629888-3629988:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3635788-3636210:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3640324-3640333:1:exon

PTHLH
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 419612
gene: PTHLH
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: parathyroid hormone-related protein isoform X1
translation: MLWRLVQQWSVAVFLLSYSVPSCGRSVEELGRRLKRAVSEHQLLHDKGKSIQDLRRRFFLHHLIAEIHTAEIRATSEVSPNSKPAPNTKNHPVRFGSDDEGRYLTQETNKVETYKEQPLKTPGKKKKGKPGKRKEQEKKKRRTRSAWLTSGVAGSRLEGDHVSDISGTSLELDSRRH
SIO_010081: PTHLH
subclass of: SO_0000673
so part of: PTHLH
location: join(3629888..3629988,3635788..3636210,3640324..3640333)
location: region:3629888-3640333:1
so has part: feature:3629888-3629988:1:exon
so has part: feature:3635788-3636210:1:exon
so has part: feature:3640324-3640333:1:exon

XP_014422621.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3629888-3629988:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3635788-3636210:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3640324-3640333:1:exon

PTHLH
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 419612
gene: PTHLH
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: parathyroid hormone-related protein isoform X2
translation: MLWRLVQQWSVAVFLLSYSVPSCGRSVEELGRRLKRAVSEHQLLHDKGKSIQDLRRRFFLHHLIAEIHTAEIRATSEVSPNSKPAPNTKNHPVRFGSDDEGRYLTQETNKVETYKEQPLKTPGKKKKGKPGKRKEQEKKKRRTRSAWLTSGVAGSRLEGDHVSDISGTSLELDSR
SIO_010081: PTHLH
subclass of: SO_0000673
so part of: PTHLH
location: join(3629888..3629988,3635788..3636214)
location: region:3629888-3636214:1
so has part: feature:3629888-3629988:1:exon
so has part: feature:3635788-3636214:1:exon

XP_014422623.1
type: Protein
SIO_000068: ncbiprotein

position:3636214:1
position: 3636214
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3629888-3629988:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3635788-3636214:1:exon

TRNAG-ACC
type: Gene
subclass of: SO_0000704
RO_0002162: 419612
gene: TRNAG-ACC
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
so part of: sequence
location: complement(3677015..3677086)
location: region:3677015-3677086:-1
so has part: feature:3677015-3677086:-1:exon
subclass of: SO_0000663

116661409
type: Gene
SIO_000068: ncbigene

position:3677015:-1
position: 3677015
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3677086:-1
position: 3677086
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3677015-3677086:-1:exon

TRNAG-ACC
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 419612
gene: TRNAG-ACC
product: tRNA-Gly
inference: COORDINATES: profile:tRNAscan-SE:1.23
note: transfer RNA glycine (anticodon ACC); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:complement(3677052..3677054),aa:Gly, seq:acc)
SIO_010081: TRNAG-ACC
subclass of: SO_0000673
so part of: TRNAG-ACC
location: complement(3677015..3677086)
location: region:3677015-3677086:-1
so has part: feature:3677015-3677086:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3677015-3677086:-1:exon

LOC106730912
type: Gene
subclass of: SO_0000704
RO_0002162: 419612
gene: LOC106730912
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(3679435..3735228)
location: region:3679435-3735228:-1
so has part: feature:3679435-3735228:-1:exon
subclass of: SO_0000011

106730912
type: Gene
SIO_000068: ncbigene

position:3679435:-1
position: 3679435
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3735228:-1
position: 3735228
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3679435-3735228:-1:exon

LOC106730912
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 419612
nc RNA class: lncRNA
gene: LOC106730912
product: uncharacterized LOC106730912, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XR_001367355.2
SIO_010081: LOC106730912
subclass of: SO_0000673
so part of: LOC106730912
location: complement(join(3679435..3679593,3709125..3709233,3735019..3735228))
location: region:3679435-3735228:-1
so has part: feature:3735019-3735228:-1:exon
so has part: feature:3709125-3709233:-1:exon
so has part: feature:3679435-3679593:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3735019-3735228:-1:exon

position:3735019:-1
position: 3735019
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3709125-3709233:-1:exon

position:3709125:-1
position: 3709125
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3709233:-1
position: 3709233
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3679435-3679593:-1:exon

position:3679593:-1
position: 3679593
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC106730912
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 419612
nc RNA class: lncRNA
gene: LOC106730912
product: uncharacterized LOC106730912, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XR_004317206.1
SIO_010081: LOC106730912
subclass of: SO_0000673
so part of: LOC106730912
location: complement(join(3679435..3679593,3709125..3709233,3711640..3711780,3735019..3735228))
location: region:3679435-3735228:-1
so has part: feature:3735019-3735228:-1:exon
so has part: feature:3711640-3711780:-1:exon
so has part: feature:3709125-3709233:-1:exon
so has part: feature:3679435-3679593:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3735019-3735228:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3711640-3711780:-1:exon

position:3711640:-1
position: 3711640
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3711780:-1
position: 3711780
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3709125-3709233:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3679435-3679593:-1:exon

KLHL42
type: Gene
subclass of: SO_0000704
RO_0002162: 419612
gene: KLHL42
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(3745453..3766090)
location: region:3745453-3766090:-1
so has part: feature:3745453-3766090:-1:exon
subclass of: SO_0000010

102508675
type: Gene
SIO_000068: ncbigene

position:3745453:-1
position: 3745453
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3766090:-1
position: 3766090
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3745453-3766090:-1:exon

KLHL42
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 419612
gene: KLHL42
product: kelch like family member 42
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 39 samples with support for all annotated introns
transcript id: XM_032473432.1
SIO_010081: KLHL42
subclass of: SO_0000673
so part of: KLHL42
location: complement(join(3745453..3750831,3755023..3755216,3764210..3766090))
location: region:3745453-3766090:-1
so has part: feature:3764210-3766090:-1:exon
so has part: feature:3755023-3755216:-1:exon
so has part: feature:3745453-3750831:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3764210-3766090:-1:exon

position:3764210:-1
position: 3764210
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3755023-3755216:-1:exon

position:3755023:-1
position: 3755023
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3755216:-1
position: 3755216
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3745453-3750831:-1:exon

position:3750831:-1
position: 3750831
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

KLHL42
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 419612
gene: KLHL42
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: kelch-like protein 42
translation: MSSSASQPSGAPRALSPAEPGHLAGPPLPARWLLPDGHSGRSALGATYTSRDGPRASAPRDTMPDSSSWAIPDVMSSGLPGPRLISSPSKRKARFFCSPLRAAKAARKRRQPASSRILRAGSITADAAALGVAAPGLRGRPRGRAFLGPAARAPGLPALPAGLARGGGPAGGCATPGVRGGGPRGPGSPPRGPPGRPQRGARAPPGPFLARPEAGEAGPPRRRRTRGEAEPPPPGAGRRGCLGRRRRGREALGGRGWPCAAAASSRRPRPAPAPEPGERAGAGGERAEPAGAPAAPRPPAMSAEEMVQIRLEDRCYPVSKRKLIEQSDYFRALYRSGMREALSPEAGGPEVQQLRGLSAPGLRLVLDFINAGGAREGWLLGPRRGQGGGLEEEEDDMDEVSLLSELVEAASFLQVTSLLQLLLSQVRLSNCMELYRLAQVYGLPDLQEACLRFMAVHFHEVLCKPQFHLLGSSPQAPGDVNLKQSLREARMTGTPVLVALGDFLGGPLAPHPYQGEPPSMLRYEEMTERWFPLANNLPPDLVNVRGYGSAILDNYLFIVGGYRITSQEISAAHSYNPSTNEWLQVASMNQKRSNFKLVAVNSKLYAIGGQAVSNVECYNPEQDAWNFVAPLPNPLAEFSACECKGKIYVIGGYTTRDRNMSILQYCPSADLWTLFETCAVHIRKQQMVSVEETIYIVGGCLHELGPGRRGGQSEDTLAVQSYNTATRRWLCLKENTSKSGLNLTCALHNDGIYIMSRDVTLSTSLEHRVFLKYNIFSDSWEAFRRFPAFGHNLLVSSLYLPKKAET
SIO_010081: KLHL42
subclass of: SO_0000673
so part of: KLHL42
location: complement(join(3750380..3750831,3755023..3755216,3764210..3765984))
location: region:3750380-3765984:-1
so has part: feature:3764210-3765984:-1:exon
so has part: feature:3755023-3755216:-1:exon
so has part: feature:3750380-3750831:-1:exon

XP_032329323.1
type: Protein
SIO_000068: ncbiprotein

position:3750380:-1
position: 3750380
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3765984:-1
position: 3765984
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3764210-3765984:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3755023-3755216:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3750380-3750831:-1:exon

MANSC4
type: Gene
subclass of: SO_0000704
RO_0002162: 419612
gene: MANSC4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 3763794..3778342
location: region:3763794-3778342:1
so has part: feature:3763794-3778342:1:exon
subclass of: SO_0000010

102508906
type: Gene
SIO_000068: ncbigene

position:3763794:1
position: 3763794
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3778342:1
position: 3778342
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3763794-3778342:1:exon

MANSC4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 419612
gene: MANSC4
product: MANSC domain containing 4, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 15 samples with support for all annotated introns
transcript id: XM_006194083.3
SIO_010081: MANSC4
subclass of: SO_0000673
so part of: MANSC4
location: join(3763794..3764170,3769701..3769750,3771063..3771612,3774364..3774498,3776886..3778342)
location: region:3763794-3778342:1
so has part: feature:3763794-3764170:1:exon
so has part: feature:3769701-3769750:1:exon
so has part: feature:3771063-3771612:1:exon
so has part: feature:3774364-3774498:1:exon
so has part: feature:3776886-3778342:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3763794-3764170:1:exon

position:3764170:1
position: 3764170
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3769701-3769750:1:exon

position:3769701:1
position: 3769701
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3769750:1
position: 3769750
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3771063-3771612:1:exon

position:3771063:1
position: 3771063
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3771612:1
position: 3771612
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3774364-3774498:1:exon

position:3774364:1
position: 3774364
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3774498:1
position: 3774498
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:3776886-3778342:1:exon

position:3776886:1
position: 3776886
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

MANSC4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 419612
gene: MANSC4
product: MANSC domain containing 4, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 17 samples with support for all annotated introns
transcript id: XM_032473433.1
SIO_010081: MANSC4
subclass of: SO_0000673
so part of: MANSC4
location: join(3765744..3765881,3769701..3769750,3771063..3771612,3774364..3774498,3776886..3778342)
location: region:3765744-3778342:1
so has part: feature:3765744-3765881:1:exon
so has part: feature:3769701-3769750:1:exon
so has part: feature:3771063-3771612:1:exon
so has part: feature:3774364-3774498:1:exon
so has part: feature:3776886-3778342:1:exon

position:3765744:1
position: 3765744
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3765744-3765881:1:exon

position:3765881:1
position: 3765881
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3769701-3769750:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3771063-3771612:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3774364-3774498:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3776886-3778342:1:exon

MANSC4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 419612
gene: MANSC4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: MANSC domain-containing protein 4
translation: MHMAVVAAGVVLLLSMGSTSEALCSPNIFYRGCWIRRFPGLLIDLEESQKLGAQFLKYYSESTGQKCSRSCCLRKDVSCNLAVFFHDPIHDNVNCLHVHCPTLDSCILEPGTSAILYNITDGIDPDLLVFEQSLPTYLNTRSSSNTWERLRILKTMNLDKQQATEIHQMLPSMEAPSSTTRQDLVANTTTTRYSKELTTDSWARFISLNDATTAKVNVVSPSTEFIGNPDNKTVSPFFVPIDTKLSHMPIPSRLNSSKQLLNKTKGYSSRNQTAESEDPAADGAPGTSATWLVPVALGTSVVFLCCCVVILVSGFCRRRQGQYKPGQRKSGSRQIKKCTILKERS
SIO_010081: MANSC4
subclass of: SO_0000673
so part of: MANSC4
location: join(3771384..3771612,3774364..3774498,3776886..3777559)
location: region:3771384-3777559:1
so has part: feature:3771384-3771612:1:exon
so has part: feature:3774364-3774498:1:exon
so has part: feature:3776886-3777559:1:exon

XP_032329324.1
type: Protein
SIO_000068: ncbiprotein

position:3771384:1
position: 3771384
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3777559:1
position: 3777559
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3771384-3771612:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3774364-3774498:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3776886-3777559:1:exon

MANSC4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 419612
gene: MANSC4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: MANSC domain-containing protein 4
translation: MHMAVVAAGVVLLLSMGSTSEALCSPNIFYRGCWIRRFPGLLIDLEESQKLGAQFLKYYSESTGQKCSRSCCLRKDVSCNLAVFFHDPIHDNVNCLHVHCPTLDSCILEPGTSAILYNITDGIDPDLLVFEQSLPTYLNTRSSSNTWERLRILKTMNLDKQQATEIHQMLPSMEAPSSTTRQDLVANTTTTRYSKELTTDSWARFISLNDATTAKVNVVSPSTEFIGNPDNKTVSPFFVPIDTKLSHMPIPSRLNSSKQLLNKTKGYSSRNQTAESEDPAADGAPGTSATWLVPVALGTSVVFLCCCVVILVSGFCRRRQGQYKPGQRKSGSRQIKKCTILKERS
SIO_010081: MANSC4
subclass of: SO_0000673
so part of: MANSC4
location: join(3771384..3771612,3774364..3774498,3776886..3777559)
location: region:3771384-3777559:1
so has part: feature:3771384-3771612:1:exon
so has part: feature:3774364-3774498:1:exon
so has part: feature:3776886-3777559:1:exon

XP_006194145.2
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3771384-3771612:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3774364-3774498:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3776886-3777559:1:exon

MRPS35
type: Gene
subclass of: SO_0000704
RO_0002162: 419612
gene: MRPS35
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(3781635..3811560)
location: region:3781635-3811560:-1
so has part: feature:3781635-3811560:-1:exon
subclass of: SO_0000010

102506283
type: Gene
SIO_000068: ncbigene

position:3781635:-1
position: 3781635
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3811560:-1
position: 3811560
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3781635-3811560:-1:exon

MRPS35
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 419612
gene: MRPS35
product: mitochondrial ribosomal protein S35
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 41 samples with support for all annotated introns
transcript id: XM_032473434.1
SIO_010081: MRPS35
subclass of: SO_0000673
so part of: MRPS35
location: complement(join(3781635..3781990,3792511..3792580,3794350..3794459,3798774..3798913,3804927..3804987,3806803..3806970,3808099..3808136,3811402..3811560))
location: region:3781635-3811560:-1
so has part: feature:3811402-3811560:-1:exon
so has part: feature:3808099-3808136:-1:exon
so has part: feature:3806803-3806970:-1:exon
so has part: feature:3804927-3804987:-1:exon
so has part: feature:3798774-3798913:-1:exon
so has part: feature:3794350-3794459:-1:exon
so has part: feature:3792511-3792580:-1:exon
so has part: feature:3781635-3781990:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3811402-3811560:-1:exon

position:3811402:-1
position: 3811402
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3808099-3808136:-1:exon

position:3808099:-1
position: 3808099
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3808136:-1
position: 3808136
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3806803-3806970:-1:exon

position:3806803:-1
position: 3806803
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3806970:-1
position: 3806970
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3804927-3804987:-1:exon

position:3804927:-1
position: 3804927
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3804987:-1
position: 3804987
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:3798774-3798913:-1:exon

position:3798774:-1
position: 3798774
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3798913:-1
position: 3798913
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:3794350-3794459:-1:exon

position:3794350:-1
position: 3794350
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3794459:-1
position: 3794459
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:3792511-3792580:-1:exon

position:3792511:-1
position: 3792511
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3792580:-1
position: 3792580
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:3781635-3781990:-1:exon

position:3781990:-1
position: 3781990
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

MRPS35
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 419612
gene: MRPS35
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: 28S ribosomal protein S35, mitochondrial
translation: MAAAALPAWLALPPRAGTLRAFSTAVSPATRSPRSRLQRTSRNERPLRRKALPPRTEKMAVDQDWPSVYPVAAPFKPSAVPLPVRMGYPVKRGVPMAKEGNLELLKIPNFLHLTPVAIKKHCEALKDFCTEWPAALDSDEKCKKHFPIEIDTADYVSAGPSIRNPKARVVTLRVKLSSLNLDDHAKKKLIKLVGDRYCKTTDVLTIQTDRCPLKRQNYDYAMYLLTVLYHESWKMEEWEKKKTEADMEEYVWENSSSEKNILETLLQIKAAEKNLELSKEELLATKEVEDYRKSVVSLKNEGDNENTLSQYKESVKKLLNLT
SIO_010081: MRPS35
subclass of: SO_0000673
so part of: MRPS35
location: complement(join(3781721..3781990,3792511..3792580,3794350..3794459,3798774..3798913,3804927..3804987,3806803..3806970,3808099..3808136,3811402..3811513))
location: region:3781721-3811513:-1
so has part: feature:3811402-3811513:-1:exon
so has part: feature:3808099-3808136:-1:exon
so has part: feature:3806803-3806970:-1:exon
so has part: feature:3804927-3804987:-1:exon
so has part: feature:3798774-3798913:-1:exon
so has part: feature:3794350-3794459:-1:exon
so has part: feature:3792511-3792580:-1:exon
so has part: feature:3781721-3781990:-1:exon

XP_032329325.1
type: Protein
SIO_000068: ncbiprotein

position:3781721:-1
position: 3781721
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3811513:-1
position: 3811513
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3811402-3811513:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3808099-3808136:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3806803-3806970:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3804927-3804987:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3798774-3798913:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3794350-3794459:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3792511-3792580:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3781721-3781990:-1:exon

REP15
type: Gene
subclass of: SO_0000704
RO_0002162: 419612
gene: REP15
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(3815659..3818659)
location: region:3815659-3818659:-1
so has part: feature:3815659-3818659:-1:exon
subclass of: SO_0000010

102506532
type: Gene
SIO_000068: ncbigene

position:3815659:-1
position: 3815659
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3818659:-1
position: 3818659
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3815659-3818659:-1:exon

REP15
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 419612
gene: REP15
product: RAB15 effector protein
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_032473436.1
SIO_010081: REP15
subclass of: SO_0000673
so part of: REP15
location: complement(3815659..3818659)
location: region:3815659-3818659:-1
so has part: feature:3815659-3818659:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3815659-3818659:-1:exon

REP15
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 419612
gene: REP15
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: rab15 effector protein
translation: MGQKPSQQMTLKDSEEVLSICELVSGAIVHAAQKLKEYLGFEDTLGNLCPAPNTLNEIFLIHFVTFCQEKGVDEWLTTTKMTKHQASLFGADWIWTFWGPDKQIRLQLAVQTVQMSSLPRVESNPESRAEASSSKRSRFEKLEEFCNLIGEDCLGLFIIFGVPGKPKDIRGVVLDSVKGETVSLRGGTAVAQFVLETEDCVSIRELLGNCLSKKDGLREVGRVYISIL
SIO_010081: REP15
subclass of: SO_0000673
so part of: REP15
location: complement(3817286..3817972)
location: region:3817286-3817972:-1
so has part: feature:3817286-3817972:-1:exon

XP_032329327.1
type: Protein
SIO_000068: ncbiprotein

position:3817286:-1
position: 3817286
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3817972:-1
position: 3817972
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3817286-3817972:-1:exon

PPFIBP1
type: Gene
subclass of: SO_0000704
RO_0002162: 419612
gene: PPFIBP1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(3818803..3972445)
location: region:3818803-3972445:-1
so has part: feature:3818803-3972445:-1:exon
subclass of: SO_0000010

102506795
type: Gene
SIO_000068: ncbigene

position:3818803:-1
position: 3818803
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3972445:-1
position: 3972445
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3818803-3972445:-1:exon

PPFIBP1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 419612
gene: PPFIBP1
product: PPFIA binding protein 1, transcript variant X9
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 17 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns
transcript id: XM_032473427.1
SIO_010081: PPFIBP1
subclass of: SO_0000673
so part of: PPFIBP1
location: complement(join(3818803..3820660,3820786..3820851,3821561..3821737,3822991..3823179,3823942..3824067,3824584..3824706,3827612..3827700,3827856..3827967,3828670..3828820,3830450..3830578,3830877..3831027,3833102..3833134,3833615..3833786,3836458..3836487,3836837..3836897,3838404..3838460,3839035..3839150,3842386..3842540,3845077..3845152,3848169..3848230,3849940..3849972,3851711..3851825,3853218..3853310,3853645..3853737,3857810..3857941,3858999..3859112,3860185..3860271,3870266..3870471,3873074..3873172,3920406..3920501,3972269..3972445))
location: region:3818803-3972445:-1
so has part: feature:3972269-3972445:-1:exon
so has part: feature:3920406-3920501:-1:exon
so has part: feature:3873074-3873172:-1:exon
so has part: feature:3870266-3870471:-1:exon
so has part: feature:3860185-3860271:-1:exon
so has part: feature:3858999-3859112:-1:exon
so has part: feature:3857810-3857941:-1:exon
so has part: feature:3853645-3853737:-1:exon
so has part: feature:3853218-3853310:-1:exon
so has part: feature:3851711-3851825:-1:exon
so has part: feature:3849940-3849972:-1:exon
so has part: feature:3848169-3848230:-1:exon
so has part: feature:3845077-3845152:-1:exon
so has part: feature:3842386-3842540:-1:exon
so has part: feature:3839035-3839150:-1:exon
so has part: feature:3838404-3838460:-1:exon
so has part: feature:3836837-3836897:-1:exon
so has part: feature:3836458-3836487:-1:exon
so has part: feature:3833615-3833786:-1:exon
so has part: feature:3833102-3833134:-1:exon
so has part: feature:3830877-3831027:-1:exon
so has part: feature:3830450-3830578:-1:exon
so has part: feature:3828670-3828820:-1:exon
so has part: feature:3827856-3827967:-1:exon
so has part: feature:3827612-3827700:-1:exon
so has part: feature:3824584-3824706:-1:exon
so has part: feature:3823942-3824067:-1:exon
so has part: feature:3822991-3823179:-1:exon
so has part: feature:3821561-3821737:-1:exon
so has part: feature:3820786-3820851:-1:exon
so has part: feature:3818803-3820660:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3972269-3972445:-1:exon

position:3972269:-1
position: 3972269
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3920406-3920501:-1:exon

position:3920406:-1
position: 3920406
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3920501:-1
position: 3920501
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3873074-3873172:-1:exon

position:3873074:-1
position: 3873074
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3873172:-1
position: 3873172
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3870266-3870471:-1:exon

position:3870266:-1
position: 3870266
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3870471:-1
position: 3870471
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:3860185-3860271:-1:exon

position:3860185:-1
position: 3860185
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3860271:-1
position: 3860271
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:3858999-3859112:-1:exon

position:3858999:-1
position: 3858999
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3859112:-1
position: 3859112
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:3857810-3857941:-1:exon

position:3857810:-1
position: 3857810
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3857941:-1
position: 3857941
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:3853645-3853737:-1:exon

position:3853645:-1
position: 3853645
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3853737:-1
position: 3853737
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:3853218-3853310:-1:exon

position:3853218:-1
position: 3853218
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3853310:-1
position: 3853310
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:3851711-3851825:-1:exon

position:3851711:-1
position: 3851711
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3851825:-1
position: 3851825
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:3849940-3849972:-1:exon

position:3849940:-1
position: 3849940
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3849972:-1
position: 3849972
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:3848169-3848230:-1:exon

position:3848169:-1
position: 3848169
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3848230:-1
position: 3848230
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:3845077-3845152:-1:exon

position:3845077:-1
position: 3845077
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3845152:-1
position: 3845152
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:3842386-3842540:-1:exon

position:3842386:-1
position: 3842386
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3842540:-1
position: 3842540
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:3839035-3839150:-1:exon

position:3839035:-1
position: 3839035
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3839150:-1
position: 3839150
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:3838404-3838460:-1:exon

position:3838404:-1
position: 3838404
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3838460:-1
position: 3838460
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:3836837-3836897:-1:exon

position:3836837:-1
position: 3836837
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3836897:-1
position: 3836897
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:3836458-3836487:-1:exon

position:3836458:-1
position: 3836458
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3836487:-1
position: 3836487
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:3833615-3833786:-1:exon

position:3833615:-1
position: 3833615
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3833786:-1
position: 3833786
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:3833102-3833134:-1:exon

position:3833102:-1
position: 3833102
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3833134:-1
position: 3833134
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:3830877-3831027:-1:exon

position:3830877:-1
position: 3830877
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3831027:-1
position: 3831027
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:3830450-3830578:-1:exon

position:3830450:-1
position: 3830450
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3830578:-1
position: 3830578
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:3828670-3828820:-1:exon

position:3828670:-1
position: 3828670
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3828820:-1
position: 3828820
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:3827856-3827967:-1:exon

position:3827856:-1
position: 3827856
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3827967:-1
position: 3827967
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:3827612-3827700:-1:exon

position:3827612:-1
position: 3827612
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3827700:-1
position: 3827700
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 26
SIO_000628: feature:3824584-3824706:-1:exon

position:3824584:-1
position: 3824584
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3824706:-1
position: 3824706
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 27
SIO_000628: feature:3823942-3824067:-1:exon

position:3823942:-1
position: 3823942
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3824067:-1
position: 3824067
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 28
SIO_000628: feature:3822991-3823179:-1:exon

position:3822991:-1
position: 3822991
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3823179:-1
position: 3823179
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 29
SIO_000628: feature:3821561-3821737:-1:exon

position:3821561:-1
position: 3821561
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3821737:-1
position: 3821737
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 30
SIO_000628: feature:3820786-3820851:-1:exon

position:3820786:-1
position: 3820786
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3820851:-1
position: 3820851
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 31
SIO_000628: feature:3818803-3820660:-1:exon

position:3820660:-1
position: 3820660
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

PPFIBP1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 419612
gene: PPFIBP1
product: PPFIA binding protein 1, transcript variant X7
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 17 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_032473424.1
SIO_010081: PPFIBP1
subclass of: SO_0000673
so part of: PPFIBP1
location: complement(join(3818803..3820660,3820786..3820851,3821561..3821737,3822991..3823179,3823942..3824067,3824584..3824706,3827612..3827700,3827856..3827967,3828670..3828820,3830450..3830578,3830877..3831027,3833102..3833134,3833615..3833786,3836458..3836487,3836837..3836897,3838404..3838460,3839035..3839150,3842386..3842540,3845077..3845152,3848169..3848230,3849940..3849972,3851711..3851825,3853218..3853310,3853645..3853737,3857810..3857941,3858999..3859112,3860185..3860271,3870266..3870471,3873074..3873172,3889546..3889717,3920406..3920501,3972269..3972445))
location: region:3818803-3972445:-1
so has part: feature:3972269-3972445:-1:exon
so has part: feature:3920406-3920501:-1:exon
so has part: feature:3889546-3889717:-1:exon
so has part: feature:3873074-3873172:-1:exon
so has part: feature:3870266-3870471:-1:exon
so has part: feature:3860185-3860271:-1:exon
so has part: feature:3858999-3859112:-1:exon
so has part: feature:3857810-3857941:-1:exon
so has part: feature:3853645-3853737:-1:exon
so has part: feature:3853218-3853310:-1:exon
so has part: feature:3851711-3851825:-1:exon
so has part: feature:3849940-3849972:-1:exon
so has part: feature:3848169-3848230:-1:exon
so has part: feature:3845077-3845152:-1:exon
so has part: feature:3842386-3842540:-1:exon
so has part: feature:3839035-3839150:-1:exon
so has part: feature:3838404-3838460:-1:exon
so has part: feature:3836837-3836897:-1:exon
so has part: feature:3836458-3836487:-1:exon
so has part: feature:3833615-3833786:-1:exon
so has part: feature:3833102-3833134:-1:exon
so has part: feature:3830877-3831027:-1:exon
so has part: feature:3830450-3830578:-1:exon
so has part: feature:3828670-3828820:-1:exon
so has part: feature:3827856-3827967:-1:exon
so has part: feature:3827612-3827700:-1:exon
so has part: feature:3824584-3824706:-1:exon
so has part: feature:3823942-3824067:-1:exon
so has part: feature:3822991-3823179:-1:exon
so has part: feature:3821561-3821737:-1:exon
so has part: feature:3820786-3820851:-1:exon
so has part: feature:3818803-3820660:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3972269-3972445:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3920406-3920501:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3889546-3889717:-1:exon

position:3889546:-1
position: 3889546
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3889717:-1
position: 3889717
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3873074-3873172:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3870266-3870471:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3860185-3860271:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3858999-3859112:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3857810-3857941:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3853645-3853737:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3853218-3853310:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3851711-3851825:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3849940-3849972:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3848169-3848230:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:3845077-3845152:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:3842386-3842540:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:3839035-3839150:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:3838404-3838460:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:3836837-3836897:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:3836458-3836487:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:3833615-3833786:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:3833102-3833134:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:3830877-3831027:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:3830450-3830578:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:3828670-3828820:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:3827856-3827967:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:3827612-3827700:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:3824584-3824706:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:3823942-3824067:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:3822991-3823179:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:3821561-3821737:-1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:3820786-3820851:-1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:3818803-3820660:-1:exon

PPFIBP1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 419612
gene: PPFIBP1
product: PPFIA binding protein 1, transcript variant X11
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 17 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_032473429.1
SIO_010081: PPFIBP1
subclass of: SO_0000673
so part of: PPFIBP1
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PPFIBP1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 419612
gene: PPFIBP1
product: PPFIA binding protein 1, transcript variant X10
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 17 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
transcript id: XM_032473428.1
SIO_010081: PPFIBP1
subclass of: SO_0000673
so part of: PPFIBP1
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location: region:3818803-3972445:-1
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PPFIBP1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 419612
gene: PPFIBP1
product: PPFIA binding protein 1, transcript variant X12
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 17 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XM_032473430.1
SIO_010081: PPFIBP1
subclass of: SO_0000673
so part of: PPFIBP1
location: complement(join(3818803..3820660,3820786..3820851,3821561..3821737,3822991..3823179,3823942..3824067,3824584..3824706,3827612..3827700,3827856..3827967,3828670..3828820,3830450..3830578,3830877..3831027,3833102..3833134,3833615..3833786,3836458..3836487,3836837..3836897,3838404..3838460,3839035..3839150,3842386..3842540,3845077..3845152,3848169..3848230,3849940..3849972,3851711..3851825,3853218..3853310,3853645..3853737,3857810..3857941,3858999..3859112,3860185..3860271,3870266..3870471,3873074..3873172,3918494..3918613))
location: region:3818803-3918613:-1
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PPFIBP1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 419612
gene: PPFIBP1
product: PPFIA binding protein 1, transcript variant X13
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 17 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_032473431.1
SIO_010081: PPFIBP1
subclass of: SO_0000673
so part of: PPFIBP1
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location: region:3818803-3899332:-1
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urn:…
SIO_000300: 30
SIO_000628: feature:3818803-3820660:-1:exon

PPFIBP1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 419612
gene: PPFIBP1
product: PPFIA binding protein 1, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 17 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_032473420.1
SIO_010081: PPFIBP1
subclass of: SO_0000673
so part of: PPFIBP1
location: complement(join(3818803..3820660,3820786..3820851,3821561..3821737,3822991..3823179,3823942..3824067,3824584..3824706,3827612..3827700,3827856..3827967,3828670..3828820,3830450..3830578,3830877..3831027,3833615..3833786,3836458..3836487,3836837..3836897,3838404..3838460,3839035..3839150,3842386..3842540,3845077..3845152,3848169..3848230,3849940..3849972,3851711..3851825,3853218..3853310,3853645..3853737,3857810..3857941,3858999..3859112,3860185..3860271,3870266..3870471,3873074..3873172,3882693..3882711))
location: region:3818803-3882711:-1
so has part: feature:3882693-3882711:-1:exon
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so has part: feature:3820786-3820851:-1:exon
so has part: feature:3818803-3820660:-1:exon

position:3882711:-1
position: 3882711
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
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position:3882693:-1
position: 3882693
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

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urn:…
SIO_000300: 29
SIO_000628: feature:3818803-3820660:-1:exon

PPFIBP1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 419612
gene: PPFIBP1
product: PPFIA binding protein 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 17 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_032473418.1
SIO_010081: PPFIBP1
subclass of: SO_0000673
so part of: PPFIBP1
location: complement(join(3818803..3820660,3820786..3820851,3821561..3821737,3822991..3823179,3823942..3824067,3824584..3824706,3827612..3827700,3827856..3827967,3828670..3828820,3830450..3830578,3830877..3831027,3833102..3833134,3833615..3833786,3836458..3836487,3836837..3836897,3838404..3838460,3839035..3839150,3842386..3842540,3845077..3845152,3848169..3848230,3849940..3849972,3851711..3851825,3853218..3853310,3853645..3853737,3857810..3857941,3858999..3859112,3860185..3860271,3870266..3870471,3873074..3873172,3882693..3882711))
location: region:3818803-3882711:-1
so has part: feature:3882693-3882711:-1:exon
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urn:…
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SIO_000300: 29
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urn:…
SIO_000300: 30
SIO_000628: feature:3818803-3820660:-1:exon

PPFIBP1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 419612
gene: PPFIBP1
product: PPFIA binding protein 1, transcript variant X8
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 22 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 39 samples with support for all annotated introns
transcript id: XM_032473425.1
SIO_010081: PPFIBP1
subclass of: SO_0000673
so part of: PPFIBP1
location: complement(join(3818803..3820660,3820786..3820851,3821561..3821737,3822991..3823179,3823942..3824067,3824584..3824706,3827612..3827700,3827856..3827967,3828670..3828820,3830450..3830578,3830877..3831027,3833615..3833786,3836458..3836487,3836837..3836897,3838404..3838460,3839035..3839150,3842386..3842540,3845077..3845152,3848169..3848230,3851711..3851825,3853645..3853737,3857810..3857941,3858999..3859112,3860185..3860271,3870266..3870471,3873074..3873172))
location: region:3818803-3873172:-1
so has part: feature:3873074-3873172:-1:exon
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urn:…
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urn:…
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PPFIBP1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 419612
gene: PPFIBP1
product: PPFIA binding protein 1, transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 21 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 37 samples with support for all annotated introns
transcript id: XM_032473423.1
SIO_010081: PPFIBP1
subclass of: SO_0000673
so part of: PPFIBP1
location: complement(join(3818803..3820660,3820786..3820851,3821561..3821737,3822991..3823179,3823942..3824067,3824584..3824706,3827612..3827700,3827856..3827967,3828670..3828820,3830450..3830578,3830877..3831027,3833102..3833134,3833615..3833786,3836458..3836487,3836837..3836897,3838404..3838460,3839035..3839150,3842386..3842540,3845077..3845152,3848169..3848230,3851711..3851825,3853645..3853737,3857810..3857941,3858999..3859112,3860185..3860271,3870266..3870471,3873074..3873172))
location: region:3818803-3873172:-1
so has part: feature:3873074-3873172:-1:exon
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urn:…
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urn:…
SIO_000300: 13
SIO_000628: feature:3836837-3836897:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:3836458-3836487:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:3833615-3833786:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:3833102-3833134:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:3830877-3831027:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:3830450-3830578:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:3828670-3828820:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:3827856-3827967:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:3827612-3827700:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:3824584-3824706:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:3823942-3824067:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:3822991-3823179:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:3821561-3821737:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:3820786-3820851:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:3818803-3820660:-1:exon

PPFIBP1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 419612
gene: PPFIBP1
product: PPFIA binding protein 1, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 21 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 34 samples with support for all annotated introns
transcript id: XM_032473422.1
SIO_010081: PPFIBP1
subclass of: SO_0000673
so part of: PPFIBP1
location: complement(join(3818803..3820660,3820786..3820851,3821561..3821737,3822991..3823179,3823942..3824067,3824584..3824706,3827612..3827700,3827856..3827967,3828670..3828820,3830450..3830578,3830877..3831027,3833102..3833134,3833615..3833786,3836458..3836487,3836837..3836897,3838404..3838460,3839035..3839150,3842386..3842540,3845077..3845152,3848169..3848230,3849940..3849972,3851711..3851825,3853645..3853737,3857810..3857941,3858999..3859112,3860185..3860271,3870266..3870471,3873074..3873172))
location: region:3818803-3873172:-1
so has part: feature:3873074-3873172:-1:exon
so has part: feature:3870266-3870471:-1:exon
so has part: feature:3860185-3860271:-1:exon
so has part: feature:3858999-3859112:-1:exon
so has part: feature:3857810-3857941:-1:exon
so has part: feature:3853645-3853737:-1:exon
so has part: feature:3851711-3851825:-1:exon
so has part: feature:3849940-3849972:-1:exon
so has part: feature:3848169-3848230:-1:exon
so has part: feature:3845077-3845152:-1:exon
so has part: feature:3842386-3842540:-1:exon
so has part: feature:3839035-3839150:-1:exon
so has part: feature:3838404-3838460:-1:exon
so has part: feature:3836837-3836897:-1:exon
so has part: feature:3836458-3836487:-1:exon
so has part: feature:3833615-3833786:-1:exon
so has part: feature:3833102-3833134:-1:exon
so has part: feature:3830877-3831027:-1:exon
so has part: feature:3830450-3830578:-1:exon
so has part: feature:3828670-3828820:-1:exon
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so has part: feature:3827612-3827700:-1:exon
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so has part: feature:3822991-3823179:-1:exon
so has part: feature:3821561-3821737:-1:exon
so has part: feature:3820786-3820851:-1:exon
so has part: feature:3818803-3820660:-1:exon

urn:…
SIO_000300: 1
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urn:…
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urn:…
SIO_000300: 3
SIO_000628: feature:3860185-3860271:-1:exon

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SIO_000300: 4
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SIO_000300: 5
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SIO_000300: 6
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urn:…
SIO_000300: 7
SIO_000628: feature:3851711-3851825:-1:exon

urn:…
SIO_000300: 8
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urn:…
SIO_000300: 10
SIO_000628: feature:3845077-3845152:-1:exon

urn:…
SIO_000300: 11
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urn:…
SIO_000300: 12
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urn:…
SIO_000300: 13
SIO_000628: feature:3838404-3838460:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:3836837-3836897:-1:exon

urn:…
SIO_000300: 15
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urn:…
SIO_000300: 16
SIO_000628: feature:3833615-3833786:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:3833102-3833134:-1:exon

urn:…
SIO_000300: 18
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urn:…
SIO_000300: 19
SIO_000628: feature:3830450-3830578:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:3828670-3828820:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:3827856-3827967:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:3827612-3827700:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:3824584-3824706:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:3823942-3824067:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:3822991-3823179:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:3821561-3821737:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:3820786-3820851:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:3818803-3820660:-1:exon

PPFIBP1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 419612
gene: PPFIBP1
product: PPFIA binding protein 1, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 21 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 12 samples with support for all annotated introns
transcript id: XM_032473421.1
SIO_010081: PPFIBP1
subclass of: SO_0000673
so part of: PPFIBP1
location: complement(join(3818803..3820660,3820786..3820851,3821561..3821737,3822991..3823179,3823942..3824067,3824584..3824706,3827612..3827700,3827856..3827967,3828670..3828820,3830450..3830578,3830877..3831027,3833615..3833786,3836458..3836487,3836837..3836897,3838404..3838460,3839035..3839150,3842386..3842540,3845077..3845152,3848169..3848230,3851711..3851825,3853218..3853310,3853645..3853737,3857810..3857941,3858999..3859112,3860185..3860271,3870266..3870471,3873074..3873172))
location: region:3818803-3873172:-1
so has part: feature:3873074-3873172:-1:exon
so has part: feature:3870266-3870471:-1:exon
so has part: feature:3860185-3860271:-1:exon
so has part: feature:3858999-3859112:-1:exon
so has part: feature:3857810-3857941:-1:exon
so has part: feature:3853645-3853737:-1:exon
so has part: feature:3853218-3853310:-1:exon
so has part: feature:3851711-3851825:-1:exon
so has part: feature:3848169-3848230:-1:exon
so has part: feature:3845077-3845152:-1:exon
so has part: feature:3842386-3842540:-1:exon
so has part: feature:3839035-3839150:-1:exon
so has part: feature:3838404-3838460:-1:exon
so has part: feature:3836837-3836897:-1:exon
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so has part: feature:3833615-3833786:-1:exon
so has part: feature:3830877-3831027:-1:exon
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so has part: feature:3828670-3828820:-1:exon
so has part: feature:3827856-3827967:-1:exon
so has part: feature:3827612-3827700:-1:exon
so has part: feature:3824584-3824706:-1:exon
so has part: feature:3823942-3824067:-1:exon
so has part: feature:3822991-3823179:-1:exon
so has part: feature:3821561-3821737:-1:exon
so has part: feature:3820786-3820851:-1:exon
so has part: feature:3818803-3820660:-1:exon

urn:…
SIO_000300: 1
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urn:…
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SIO_000300: 3
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SIO_000300: 5
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urn:…
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urn:…
SIO_000300: 7
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urn:…
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urn:…
SIO_000300: 12
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urn:…
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urn:…
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urn:…
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urn:…
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urn:…
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urn:…
SIO_000300: 19
SIO_000628: feature:3828670-3828820:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:3827856-3827967:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:3827612-3827700:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:3824584-3824706:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:3823942-3824067:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:3822991-3823179:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:3821561-3821737:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:3820786-3820851:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:3818803-3820660:-1:exon

PPFIBP1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 419612
gene: PPFIBP1
product: PPFIA binding protein 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 19 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns
transcript id: XM_032473419.1
SIO_010081: PPFIBP1
subclass of: SO_0000673
so part of: PPFIBP1
location: complement(join(3818803..3820660,3820786..3820851,3821561..3821737,3822991..3823179,3823942..3824067,3824584..3824706,3827612..3827700,3827856..3827967,3828670..3828820,3830450..3830578,3830877..3831027,3833102..3833134,3833615..3833786,3836458..3836487,3836837..3836897,3838404..3838460,3839035..3839150,3842386..3842540,3845077..3845152,3848169..3848230,3851711..3851825,3853218..3853310,3853645..3853737,3857810..3857941,3858999..3859112,3860185..3860271,3870266..3870471,3873074..3873172))
location: region:3818803-3873172:-1
so has part: feature:3873074-3873172:-1:exon
so has part: feature:3870266-3870471:-1:exon
so has part: feature:3860185-3860271:-1:exon
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so has part: feature:3820786-3820851:-1:exon
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urn:…
SIO_000300: 1
SIO_000628: feature:3873074-3873172:-1:exon

urn:…
SIO_000300: 2
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urn:…
SIO_000300: 3
SIO_000628: feature:3860185-3860271:-1:exon

urn:…
SIO_000300: 4
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urn:…
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urn:…
SIO_000300: 6
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urn:…
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urn:…
SIO_000300: 8
SIO_000628: feature:3851711-3851825:-1:exon

urn:…
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SIO_000628: feature:3848169-3848230:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3845077-3845152:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3842386-3842540:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3839035-3839150:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3838404-3838460:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:3836837-3836897:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:3836458-3836487:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:3833615-3833786:-1:exon

urn:…
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SIO_000628: feature:3833102-3833134:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:3830877-3831027:-1:exon

urn:…
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SIO_000628: feature:3830450-3830578:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:3828670-3828820:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:3827856-3827967:-1:exon

urn:…
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SIO_000628: feature:3827612-3827700:-1:exon

urn:…
SIO_000300: 23
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urn:…
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SIO_000628: feature:3823942-3824067:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:3822991-3823179:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:3821561-3821737:-1:exon

urn:…
SIO_000300: 27
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urn:…
SIO_000300: 28
SIO_000628: feature:3818803-3820660:-1:exon

PPFIBP1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 419612
gene: PPFIBP1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: liprin-beta-1 isoform X7
translation: MDTPCRPWSGHSVGTGFASGSRQLLYRGWNLPLTNSKMMSDASDMLAAALEQMDGIIAGSKALEYSNGIFDCQSPTSPFMGSLRALHLVEDLRGVLEVMETDEKEGLRCQIPDSTAETLIEWLQSHMTNGHLPGNGDVYQERLARLENDKESLILQVSVLTDQVEAQGEKIRDLEFCLEEHREKLNATEEMLQQELLSRTSLETQKLDLMAEISNLKLKLTAVEKDRLDYEDRFRDTEGLMQEINDLRLRVSEMDSERLQYEKKLKSTKSLMAKLSSMKIKVGQMQYEKQRMEQKWESLKEELALLKEQLEEKESEVKRLQEKLVCKMKGEGIEILDRDENFKKKLKDKNIEVQKMKKAVESLMAANEEKDRKIEDLRQCLNRYKKMQDTAVLAQGQDGDFEDLLPSGSISTLLDAQSFSDLEKNLSPMPGTGSPSRDLLNTSVPEEFHTSILQVSIPSSLPASKGLETLEKAKLPPKPETSLEENDGKIILGSAAETQSCDGLLTSSLQKSSSLGNLKKESSDGEKESIPRPSEDKAPVESSPFGSLPPKAPGHDASVDDNPFGTRKARSSFGRGFFKIKSNKRTASAPNLDRKRSASAPTLAETEKETPEHLDLAGVSSRPKDSQASSPFQVSPPSPDSKKKSRGIMKLFGKLRRSQSTTFNPDDMSEPEFKRGGTRATAGPRLGWSRDLGQSNSDLDMPFAKWTKEQVCSWLVEQGLGSYLNSGKHWISSGQTLLQASQQDLEKELGIKHSLHRKKLQLALQALGSEEETNHGKLDFNWVTRWLDDIGLPQYKTQFDEGRVDGRMLHYMTVDDLLSLKVVSVLHHLSIKRAIQVLRINNFEPNCLRRRPSDENSVTPSEVQQWTNHRVMEWLRSVDLAEYAPNLRGSGVHGGLMVLEPRFNVETMAQLLNIPPSKTLLRRHLATHFNLLVGAEAQHQKRDAMELPDYVLLTATAKVKPKKLTFSNFGNLRKKKQEDGEEYVCPMELGQASGGTKKGFKPGLDMHLYDEDDLDRLEQMEDSEGTVRQIGAFSEGINNLTHMLKEDDMFKDFAARSPSASITDEDSNV
SIO_010081: PPFIBP1
subclass of: SO_0000673
so part of: PPFIBP1
location: complement(join(3820574..3820660,3820786..3820851,3821561..3821737,3822991..3823179,3823942..3824067,3824584..3824706,3827612..3827700,3827856..3827967,3828670..3828820,3830450..3830578,3830877..3831027,3833102..3833134,3833615..3833786,3836458..3836487,3836837..3836897,3838404..3838460,3839035..3839150,3842386..3842540,3845077..3845152,3848169..3848230,3849940..3849972,3851711..3851825,3853218..3853310,3853645..3853737,3857810..3857941,3858999..3859112,3860185..3860271,3870266..3870471,3873074..3873172,3889546..3889621))
location: region:3820574-3889621:-1
so has part: feature:3889546-3889621:-1:exon
so has part: feature:3873074-3873172:-1:exon
so has part: feature:3870266-3870471:-1:exon
so has part: feature:3860185-3860271:-1:exon
so has part: feature:3858999-3859112:-1:exon
so has part: feature:3857810-3857941:-1:exon
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so has part: feature:3853218-3853310:-1:exon
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so has part: feature:3849940-3849972:-1:exon
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so has part: feature:3845077-3845152:-1:exon
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so has part: feature:3833615-3833786:-1:exon
so has part: feature:3833102-3833134:-1:exon
so has part: feature:3830877-3831027:-1:exon
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so has part: feature:3828670-3828820:-1:exon
so has part: feature:3827856-3827967:-1:exon
so has part: feature:3827612-3827700:-1:exon
so has part: feature:3824584-3824706:-1:exon
so has part: feature:3823942-3824067:-1:exon
so has part: feature:3822991-3823179:-1:exon
so has part: feature:3821561-3821737:-1:exon
so has part: feature:3820786-3820851:-1:exon
so has part: feature:3820574-3820660:-1:exon

XP_032329315.1
type: Protein
SIO_000068: ncbiprotein

position:3820574:-1
position: 3820574
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3889621:-1
position: 3889621
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3889546-3889621:-1:exon

urn:…
SIO_000300: 2
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