Camelus ferus isolate YT-003-E chromosome 33, BCGSAC_Cfer_1.0, whole genome shotgun sequence.
type: Entry
definition: Camelus ferus isolate YT-003-E chromosome 33, BCGSAC_Cfer_1.0, whole genome shotgun sequence.
sequence version: NC_045728.1
sequence date: 2020-02-19
sequence: sequence
division: CON
label: NC_045728.1
type: RefSeq
SIO_000068: refseq
dblink: PRJNA605179
dblink: SAMN12102236
keyword: WGS
keyword: RefSeq
source: Camelus ferus (Wild Bactrian camel)
organism: Camelus ferus
taxonomy: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Tylopoda; Camelidae; Camelus.
comment: REFSEQ INFORMATION: The reference sequence is identical to\nCM020800.1.\nAssembly name: BCGSAC_Cfer_1.0\nThe genomic sequence for this RefSeq record is from the\nwhole-genome assembly released by The Bactrian Camels Genome\nSequencing and Analysis Consortium on 2020/01/08. The original\nwhole-genome shotgun project has the accession VSZR00000000.1.\n\n##Genome-Assembly-Data-START##\nAssembly Provider :: The Bactrian Camels Genome Sequencing and\n Analysis Consortium\nAssembly Method :: FALCON v. FEB-2018; LACHESIS v. MAR-2018\nAssembly Name :: BCGSAC_Cfer_1.0\nGenome Representation :: Full\nExpected Final Version :: Yes\nGenome Coverage :: 50.0x\nSequencing Technology :: PacBio Sequel; Hi-C\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI\nAnnotation Status :: Full annotation\nAnnotation Name :: Camelus ferus Annotation Release 102\nAnnotation Version :: 102\nAnnotation Pipeline :: NCBI eukaryotic genome annotation\n pipeline\nAnnotation Software Version :: 8.3\nAnnotation Method :: Best-placed RefSeq; Gnomon\nFeatures Annotated :: Gene; mRNA; CDS; ncRNA\n##Genome-Annotation-Data-END##

sequence
subclass of: SO_0000340
sequence length: 21415058
topology: linear
so has quality: SO_0000987
location: 1..21415058
location: region:1-21415058:1
RO_0002162: 419612

NC_045728
type: RefSeq
SIO_000068: refseq

PRJNA605179
type: BioProject
SIO_000068: bioproject

SAMN12102236
type: BioSample
SIO_000068: biosample

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:21415058:1
position: 21415058
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-21415058:1:source
so part of: sequence
organism: Camelus ferus
mol type: genomic DNA
isolate: YT-003-E
chromosome: 33
sex: male
tissue type: ear skin
country: Mongolia

419612
type: Taxonomy
SIO_000068: taxonomy

B3GAT1
type: Gene
subclass of: SO_0000704
RO_0002162: 419612
gene: B3GAT1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 290228..312034
location: region:290228-312034:1
so has part: feature:290228-312034:1:exon
subclass of: SO_0000010

102505052
type: Gene
SIO_000068: ncbigene

position:290228:1
position: 290228
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:312034:1
position: 312034
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:290228-312034:1:exon

B3GAT1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 419612
gene: B3GAT1
product: beta-1,3-glucuronyltransferase 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 25 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
transcript id: XM_032472330.1
SIO_010081: B3GAT1
subclass of: SO_0000673
so part of: B3GAT1
location: join(290228..290607,299924..303834,303962..304108,307021..307529,307981..308277,309042..309142,310056..312034)
location: region:290228-312034:1
so has part: feature:290228-290607:1:exon
so has part: feature:299924-303834:1:exon
so has part: feature:303962-304108:1:exon
so has part: feature:307021-307529:1:exon
so has part: feature:307981-308277:1:exon
so has part: feature:309042-309142:1:exon
so has part: feature:310056-312034:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:290228-290607:1:exon

position:290607:1
position: 290607
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:299924-303834:1:exon

position:299924:1
position: 299924
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:303834:1
position: 303834
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:303962-304108:1:exon

position:303962:1
position: 303962
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:304108:1
position: 304108
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:307021-307529:1:exon

position:307021:1
position: 307021
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:307529:1
position: 307529
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:307981-308277:1:exon

position:307981:1
position: 307981
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:308277:1
position: 308277
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:309042-309142:1:exon

position:309042:1
position: 309042
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:309142:1
position: 309142
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:310056-312034:1:exon

position:310056:1
position: 310056
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

B3GAT1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 419612
gene: B3GAT1
product: beta-1,3-glucuronyltransferase 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 25 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
transcript id: XM_032472331.1
SIO_010081: B3GAT1
subclass of: SO_0000673
so part of: B3GAT1
location: join(290228..290607,299924..303834,303962..304108,307021..307529,307981..308277,309042..309142,310102..312034)
location: region:290228-312034:1
so has part: feature:290228-290607:1:exon
so has part: feature:299924-303834:1:exon
so has part: feature:303962-304108:1:exon
so has part: feature:307021-307529:1:exon
so has part: feature:307981-308277:1:exon
so has part: feature:309042-309142:1:exon
so has part: feature:310102-312034:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:290228-290607:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:299924-303834:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:303962-304108:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:307021-307529:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:307981-308277:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:309042-309142:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:310102-312034:1:exon

position:310102:1
position: 310102
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

B3GAT1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 419612
gene: B3GAT1
product: beta-1,3-glucuronyltransferase 1, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 25 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
transcript id: XM_032472333.1
SIO_010081: B3GAT1
subclass of: SO_0000673
so part of: B3GAT1
location: join(290228..290607,299924..300010,303742..303834,303962..304108,307021..307529,307981..308277,309042..309142,310056..312034)
location: region:290228-312034:1
so has part: feature:290228-290607:1:exon
so has part: feature:299924-300010:1:exon
so has part: feature:303742-303834:1:exon
so has part: feature:303962-304108:1:exon
so has part: feature:307021-307529:1:exon
so has part: feature:307981-308277:1:exon
so has part: feature:309042-309142:1:exon
so has part: feature:310056-312034:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:290228-290607:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:299924-300010:1:exon

position:300010:1
position: 300010
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:303742-303834:1:exon

position:303742:1
position: 303742
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:303962-304108:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:307021-307529:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:307981-308277:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:309042-309142:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:310056-312034:1:exon

B3GAT1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 419612
gene: B3GAT1
product: beta-1,3-glucuronyltransferase 1, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 25 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 14 samples with support for all annotated introns
transcript id: XM_032472332.1
SIO_010081: B3GAT1
subclass of: SO_0000673
so part of: B3GAT1
location: join(290228..290607,303742..303834,303962..304108,307021..307529,307981..308277,309042..309142,310056..312034)
location: region:290228-312034:1
so has part: feature:290228-290607:1:exon
so has part: feature:303742-303834:1:exon
so has part: feature:303962-304108:1:exon
so has part: feature:307021-307529:1:exon
so has part: feature:307981-308277:1:exon
so has part: feature:309042-309142:1:exon
so has part: feature:310056-312034:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:290228-290607:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:303742-303834:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:303962-304108:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:307021-307529:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:307981-308277:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:309042-309142:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:310056-312034:1:exon

B3GAT1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 419612
gene: B3GAT1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase 1 isoform X1
translation: MRSLEHRDELGFDPRQVCLHLHPADSKWAAHALCLWGQRLAGRSRDPPRKLNALYPQPASPAGACPTQVSGHPPLLCLAGVHPAGFLTASWTTHSSASSRVGLCRTASAMGNEELWTQPALEMPKRRDVLAIVLIVLPWTLLVTVWHQSTIAPLLAAHKDDGSDSRREVPPGTDPREYCMSDRDIVEVVRTEYVYTRPPPWSDTLPTIHVVTPTYSRPVQKAELTRMANTLLHVPNLHWLVVEDAPRRTPLTARLLRDTGLNYTHLHVETPRNYKLRGDARDPRIPRGTMQRNLALRWLRETFPRNSSQPGVVYFADDDNTYSLELFEEMRSTRRVSVWPVAFVGGLRYEAPRVNGAGKVVGWKTVFDPHRPFAIDMAGFAVNLRLILQRSQAYFKLRGVKGGYQESSLLRELVTLNDLEPKAANCTKILVWHTRTEKPVLVNEGKKGFTDPTVEI
SIO_010081: B3GAT1
subclass of: SO_0000673
so part of: B3GAT1
location: join(303504..303834,303962..304108,307021..307529,307981..308277,309042..309128)
location: region:303504-309128:1
so has part: feature:303504-303834:1:exon
so has part: feature:303962-304108:1:exon
so has part: feature:307021-307529:1:exon
so has part: feature:307981-308277:1:exon
so has part: feature:309042-309128:1:exon

XP_032328221.1
type: Protein
SIO_000068: ncbiprotein

position:303504:1
position: 303504
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:309128:1
position: 309128
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:303504-303834:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:303962-304108:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:307021-307529:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:307981-308277:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:309042-309128:1:exon

B3GAT1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 419612
gene: B3GAT1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase 1 isoform X1
translation: MRSLEHRDELGFDPRQVCLHLHPADSKWAAHALCLWGQRLAGRSRDPPRKLNALYPQPASPAGACPTQVSGHPPLLCLAGVHPAGFLTASWTTHSSASSRVGLCRTASAMGNEELWTQPALEMPKRRDVLAIVLIVLPWTLLVTVWHQSTIAPLLAAHKDDGSDSRREVPPGTDPREYCMSDRDIVEVVRTEYVYTRPPPWSDTLPTIHVVTPTYSRPVQKAELTRMANTLLHVPNLHWLVVEDAPRRTPLTARLLRDTGLNYTHLHVETPRNYKLRGDARDPRIPRGTMQRNLALRWLRETFPRNSSQPGVVYFADDDNTYSLELFEEMRSTRRVSVWPVAFVGGLRYEAPRVNGAGKVVGWKTVFDPHRPFAIDMAGFAVNLRLILQRSQAYFKLRGVKGGYQESSLLRELVTLNDLEPKAANCTKILVWHTRTEKPVLVNEGKKGFTDPTVEI
SIO_010081: B3GAT1
subclass of: SO_0000673
so part of: B3GAT1
location: join(303504..303834,303962..304108,307021..307529,307981..308277,309042..309128)
location: region:303504-309128:1
so has part: feature:303504-303834:1:exon
so has part: feature:303962-304108:1:exon
so has part: feature:307021-307529:1:exon
so has part: feature:307981-308277:1:exon
so has part: feature:309042-309128:1:exon

XP_032328222.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:303504-303834:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:303962-304108:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:307021-307529:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:307981-308277:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:309042-309128:1:exon

B3GAT1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 419612
gene: B3GAT1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase 1 isoform X2
translation: MGNEELWTQPALEMPKRRDVLAIVLIVLPWTLLVTVWHQSTIAPLLAAHKDDGSDSRREVPPGTDPREYCMSDRDIVEVVRTEYVYTRPPPWSDTLPTIHVVTPTYSRPVQKAELTRMANTLLHVPNLHWLVVEDAPRRTPLTARLLRDTGLNYTHLHVETPRNYKLRGDARDPRIPRGTMQRNLALRWLRETFPRNSSQPGVVYFADDDNTYSLELFEEMRSTRRVSVWPVAFVGGLRYEAPRVNGAGKVVGWKTVFDPHRPFAIDMAGFAVNLRLILQRSQAYFKLRGVKGGYQESSLLRELVTLNDLEPKAANCTKILVWHTRTEKPVLVNEGKKGFTDPTVEI
SIO_010081: B3GAT1
subclass of: SO_0000673
so part of: B3GAT1
location: join(303831..303834,303962..304108,307021..307529,307981..308277,309042..309128)
location: region:303831-309128:1
so has part: feature:303831-303834:1:exon
so has part: feature:303962-304108:1:exon
so has part: feature:307021-307529:1:exon
so has part: feature:307981-308277:1:exon
so has part: feature:309042-309128:1:exon

XP_032328223.1
type: Protein
SIO_000068: ncbiprotein

position:303831:1
position: 303831
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:303831-303834:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:303962-304108:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:307021-307529:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:307981-308277:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:309042-309128:1:exon

B3GAT1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 419612
gene: B3GAT1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase 1 isoform X2
translation: MGNEELWTQPALEMPKRRDVLAIVLIVLPWTLLVTVWHQSTIAPLLAAHKDDGSDSRREVPPGTDPREYCMSDRDIVEVVRTEYVYTRPPPWSDTLPTIHVVTPTYSRPVQKAELTRMANTLLHVPNLHWLVVEDAPRRTPLTARLLRDTGLNYTHLHVETPRNYKLRGDARDPRIPRGTMQRNLALRWLRETFPRNSSQPGVVYFADDDNTYSLELFEEMRSTRRVSVWPVAFVGGLRYEAPRVNGAGKVVGWKTVFDPHRPFAIDMAGFAVNLRLILQRSQAYFKLRGVKGGYQESSLLRELVTLNDLEPKAANCTKILVWHTRTEKPVLVNEGKKGFTDPTVEI
SIO_010081: B3GAT1
subclass of: SO_0000673
so part of: B3GAT1
location: join(303831..303834,303962..304108,307021..307529,307981..308277,309042..309128)
location: region:303831-309128:1
so has part: feature:303831-303834:1:exon
so has part: feature:303962-304108:1:exon
so has part: feature:307021-307529:1:exon
so has part: feature:307981-308277:1:exon
so has part: feature:309042-309128:1:exon

XP_032328224.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:303831-303834:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:303962-304108:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:307021-307529:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:307981-308277:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:309042-309128:1:exon

GLB1L2
type: Gene
subclass of: SO_0000704
RO_0002162: 419612
gene: GLB1L2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(313555..344376)
location: region:313555-344376:-1
so has part: feature:313555-344376:-1:exon
subclass of: SO_0000010

102505823
type: Gene
SIO_000068: ncbigene

position:313555:-1
position: 313555
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:344376:-1
position: 344376
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:313555-344376:-1:exon

GLB1L2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 419612
gene: GLB1L2
product: galactosidase beta 1 like 2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 16 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_032472464.1
SIO_010081: GLB1L2
subclass of: SO_0000673
so part of: GLB1L2
location: complement(join(313555..314428,314619..314735,315102..315213,315442..315529,316770..316848,317098..317169,317342..317482,318017..318123,318517..318597,319066..319203,320447..320531,323152..323222,326212..326293,326885..326977,331401..331509,333428..333523,334111..334179,335092..335289,344251..344376))
location: region:313555-344376:-1
so has part: feature:344251-344376:-1:exon
so has part: feature:335092-335289:-1:exon
so has part: feature:334111-334179:-1:exon
so has part: feature:333428-333523:-1:exon
so has part: feature:331401-331509:-1:exon
so has part: feature:326885-326977:-1:exon
so has part: feature:326212-326293:-1:exon
so has part: feature:323152-323222:-1:exon
so has part: feature:320447-320531:-1:exon
so has part: feature:319066-319203:-1:exon
so has part: feature:318517-318597:-1:exon
so has part: feature:318017-318123:-1:exon
so has part: feature:317342-317482:-1:exon
so has part: feature:317098-317169:-1:exon
so has part: feature:316770-316848:-1:exon
so has part: feature:315442-315529:-1:exon
so has part: feature:315102-315213:-1:exon
so has part: feature:314619-314735:-1:exon
so has part: feature:313555-314428:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:344251-344376:-1:exon

position:344251:-1
position: 344251
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:335092-335289:-1:exon

position:335092:-1
position: 335092
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:335289:-1
position: 335289
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:334111-334179:-1:exon

position:334111:-1
position: 334111
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:334179:-1
position: 334179
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:333428-333523:-1:exon

position:333428:-1
position: 333428
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:333523:-1
position: 333523
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:331401-331509:-1:exon

position:331401:-1
position: 331401
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:331509:-1
position: 331509
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:326885-326977:-1:exon

position:326885:-1
position: 326885
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:326977:-1
position: 326977
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:326212-326293:-1:exon

position:326212:-1
position: 326212
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:326293:-1
position: 326293
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:323152-323222:-1:exon

position:323152:-1
position: 323152
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:323222:-1
position: 323222
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:320447-320531:-1:exon

position:320447:-1
position: 320447
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:320531:-1
position: 320531
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:319066-319203:-1:exon

position:319066:-1
position: 319066
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:319203:-1
position: 319203
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:318517-318597:-1:exon

position:318517:-1
position: 318517
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:318597:-1
position: 318597
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:318017-318123:-1:exon

position:318017:-1
position: 318017
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:318123:-1
position: 318123
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:317342-317482:-1:exon

position:317342:-1
position: 317342
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:317482:-1
position: 317482
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:317098-317169:-1:exon

position:317098:-1
position: 317098
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:317169:-1
position: 317169
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:316770-316848:-1:exon

position:316770:-1
position: 316770
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:316848:-1
position: 316848
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:315442-315529:-1:exon

position:315442:-1
position: 315442
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:315529:-1
position: 315529
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:315102-315213:-1:exon

position:315102:-1
position: 315102
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:315213:-1
position: 315213
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:314619-314735:-1:exon

position:314619:-1
position: 314619
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:314735:-1
position: 314735
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:313555-314428:-1:exon

position:314428:-1
position: 314428
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

GLB1L2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 419612
gene: GLB1L2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: beta-galactosidase-1-like protein 2
translation: MPTWSARRRPGRTLGLLLLVILSFLVLRRWSWRGLVPTWLRHRHSGLQAKGQNFMLEDSTFWIFGGSIHYFRVPREYWRDRLLKLRACGLNTLTTYVPWNLHEPERGKFDFSGNLDLEAFVLLAAEVGLWVILRPGPYVCSELDLGGLPSWLLQDSGMRLRTTYKGFTDAVDLYFDHLMSRVVPLQYRYGGPVIAVQVENEYGSYNRDPAYMPYVKRALEDRGIVELLLTSDNKDGLSKGVMDGVLATINLQSQSELQLLVTYLLSVQSVQPKMVMEYWTGWFDSWGGPHNILDSSEVLKTVSAIVDAGSSINLYMFHGGTNFGFMNGALHFQDYKSDVTSYDYDAVLTEAGDYTAKYVKLREFFGSVSGAPLPLPPDLLPKTAYEAVKPVFCLSLWDVLPYLEEPVSSEKPVNMENLPINDGNGQSFGYTLYETTITSSGILSGLVRDRGQVFVNTVSVGFLDYKRKEVAIPLIQGFILLRILVENCGRVNYGDNINDQRKGLIGDLYLNDSPLRGFKIYSLEMKKGFFKSFLGDKWNPVPDVPTFPAFFLGVLSVPLSPYDTFMKLEGWEKGVVFVNGQNLGRYWNVGPQETLYLPGVWLAEGINQVIVFEEKMAGPMIQFTETPHLGRRQYVD
SIO_010081: GLB1L2
subclass of: SO_0000673
so part of: GLB1L2
location: complement(join(314342..314428,314619..314735,315102..315213,315442..315529,316770..316848,317098..317169,317342..317482,318017..318123,318517..318597,319066..319203,320447..320531,323152..323222,326212..326293,326885..326977,331401..331509,333428..333523,334111..334179,335092..335289,344251..344336))
location: region:314342-344336:-1
so has part: feature:344251-344336:-1:exon
so has part: feature:335092-335289:-1:exon
so has part: feature:334111-334179:-1:exon
so has part: feature:333428-333523:-1:exon
so has part: feature:331401-331509:-1:exon
so has part: feature:326885-326977:-1:exon
so has part: feature:326212-326293:-1:exon
so has part: feature:323152-323222:-1:exon
so has part: feature:320447-320531:-1:exon
so has part: feature:319066-319203:-1:exon
so has part: feature:318517-318597:-1:exon
so has part: feature:318017-318123:-1:exon
so has part: feature:317342-317482:-1:exon
so has part: feature:317098-317169:-1:exon
so has part: feature:316770-316848:-1:exon
so has part: feature:315442-315529:-1:exon
so has part: feature:315102-315213:-1:exon
so has part: feature:314619-314735:-1:exon
so has part: feature:314342-314428:-1:exon

XP_032328355.1
type: Protein
SIO_000068: ncbiprotein

position:314342:-1
position: 314342
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:344336:-1
position: 344336
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:344251-344336:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:335092-335289:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:334111-334179:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:333428-333523:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:331401-331509:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:326885-326977:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:326212-326293:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:323152-323222:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:320447-320531:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:319066-319203:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:318517-318597:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:318017-318123:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:317342-317482:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:317098-317169:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:316770-316848:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:315442-315529:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:315102-315213:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:314619-314735:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:314342-314428:-1:exon

GLB1L3
type: Gene
subclass of: SO_0000704
RO_0002162: 419612
gene: GLB1L3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(353962..387234)
location: region:353962-387234:-1
so has part: feature:353962-387234:-1:exon
subclass of: SO_0000010

102520512
type: Gene
SIO_000068: ncbigene

position:353962:-1
position: 353962
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:387234:-1
position: 387234
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:353962-387234:-1:exon

GLB1L3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 419612
gene: GLB1L3
product: galactosidase beta 1 like 3, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_032472278.1
SIO_010081: GLB1L3
subclass of: SO_0000673
so part of: GLB1L3
location: complement(join(353962..354320,354457..354573,355625..355736,355978..356065,356474..356552,356937..357008,357292..357432,358198..358304,358869..358949,359446..359583,361003..361087,370227..370291,371023..371104,372474..372566,373581..373689,374756..374851,375428..375496,379538..379783,379888..380019,386592..387234))
location: region:353962-387234:-1
so has part: feature:386592-387234:-1:exon
so has part: feature:379888-380019:-1:exon
so has part: feature:379538-379783:-1:exon
so has part: feature:375428-375496:-1:exon
so has part: feature:374756-374851:-1:exon
so has part: feature:373581-373689:-1:exon
so has part: feature:372474-372566:-1:exon
so has part: feature:371023-371104:-1:exon
so has part: feature:370227-370291:-1:exon
so has part: feature:361003-361087:-1:exon
so has part: feature:359446-359583:-1:exon
so has part: feature:358869-358949:-1:exon
so has part: feature:358198-358304:-1:exon
so has part: feature:357292-357432:-1:exon
so has part: feature:356937-357008:-1:exon
so has part: feature:356474-356552:-1:exon
so has part: feature:355978-356065:-1:exon
so has part: feature:355625-355736:-1:exon
so has part: feature:354457-354573:-1:exon
so has part: feature:353962-354320:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:386592-387234:-1:exon

position:386592:-1
position: 386592
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:379888-380019:-1:exon

position:379888:-1
position: 379888
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:380019:-1
position: 380019
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:379538-379783:-1:exon

position:379538:-1
position: 379538
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:379783:-1
position: 379783
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:375428-375496:-1:exon

position:375428:-1
position: 375428
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:375496:-1
position: 375496
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:374756-374851:-1:exon

position:374756:-1
position: 374756
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:374851:-1
position: 374851
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:373581-373689:-1:exon

position:373581:-1
position: 373581
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:373689:-1
position: 373689
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:372474-372566:-1:exon

position:372474:-1
position: 372474
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:372566:-1
position: 372566
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:371023-371104:-1:exon

position:371023:-1
position: 371023
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:371104:-1
position: 371104
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:370227-370291:-1:exon

position:370227:-1
position: 370227
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:370291:-1
position: 370291
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:361003-361087:-1:exon

position:361003:-1
position: 361003
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:361087:-1
position: 361087
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:359446-359583:-1:exon

position:359446:-1
position: 359446
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:359583:-1
position: 359583
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:358869-358949:-1:exon

position:358869:-1
position: 358869
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:358949:-1
position: 358949
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:358198-358304:-1:exon

position:358198:-1
position: 358198
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:358304:-1
position: 358304
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:357292-357432:-1:exon

position:357292:-1
position: 357292
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:357432:-1
position: 357432
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:356937-357008:-1:exon

position:356937:-1
position: 356937
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:357008:-1
position: 357008
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:356474-356552:-1:exon

position:356474:-1
position: 356474
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:356552:-1
position: 356552
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:355978-356065:-1:exon

position:355978:-1
position: 355978
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:356065:-1
position: 356065
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:355625-355736:-1:exon

position:355625:-1
position: 355625
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:355736:-1
position: 355736
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:354457-354573:-1:exon

position:354457:-1
position: 354457
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:354573:-1
position: 354573
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:353962-354320:-1:exon

position:354320:-1
position: 354320
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

GLB1L3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 419612
gene: GLB1L3
product: galactosidase beta 1 like 3, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_032472277.1
SIO_010081: GLB1L3
subclass of: SO_0000673
so part of: GLB1L3
location: complement(join(353962..354320,354457..354573,355625..355736,355978..356065,356474..356552,356937..357008,357292..357432,358198..358304,358869..358949,359446..359583,361003..361084,370227..370291,371023..371104,372474..372566,373581..373689,374756..374851,375428..375496,379538..379783,379888..380019,380728..380977))
location: region:353962-380977:-1
so has part: feature:380728-380977:-1:exon
so has part: feature:379888-380019:-1:exon
so has part: feature:379538-379783:-1:exon
so has part: feature:375428-375496:-1:exon
so has part: feature:374756-374851:-1:exon
so has part: feature:373581-373689:-1:exon
so has part: feature:372474-372566:-1:exon
so has part: feature:371023-371104:-1:exon
so has part: feature:370227-370291:-1:exon
so has part: feature:361003-361084:-1:exon
so has part: feature:359446-359583:-1:exon
so has part: feature:358869-358949:-1:exon
so has part: feature:358198-358304:-1:exon
so has part: feature:357292-357432:-1:exon
so has part: feature:356937-357008:-1:exon
so has part: feature:356474-356552:-1:exon
so has part: feature:355978-356065:-1:exon
so has part: feature:355625-355736:-1:exon
so has part: feature:354457-354573:-1:exon
so has part: feature:353962-354320:-1:exon

position:380977:-1
position: 380977
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:380728-380977:-1:exon

position:380728:-1
position: 380728
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:379888-380019:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:379538-379783:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:375428-375496:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:374756-374851:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:373581-373689:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:372474-372566:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:371023-371104:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:370227-370291:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:361003-361084:-1:exon

position:361084:-1
position: 361084
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:359446-359583:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:358869-358949:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:358198-358304:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:357292-357432:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:356937-357008:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:356474-356552:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:355978-356065:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:355625-355736:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:354457-354573:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:353962-354320:-1:exon

GLB1L3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 419612
gene: GLB1L3
product: galactosidase beta 1 like 3, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_032472276.1
SIO_010081: GLB1L3
subclass of: SO_0000673
so part of: GLB1L3
location: complement(join(353962..354320,354457..354573,355625..355736,355978..356065,356474..356552,356937..357008,357292..357432,358198..358304,358869..358949,359446..359583,361003..361087,370227..370291,371023..371104,372474..372566,373581..373689,374756..374851,375428..375496,379538..379783,379888..380019,380728..380977))
location: region:353962-380977:-1
so has part: feature:380728-380977:-1:exon
so has part: feature:379888-380019:-1:exon
so has part: feature:379538-379783:-1:exon
so has part: feature:375428-375496:-1:exon
so has part: feature:374756-374851:-1:exon
so has part: feature:373581-373689:-1:exon
so has part: feature:372474-372566:-1:exon
so has part: feature:371023-371104:-1:exon
so has part: feature:370227-370291:-1:exon
so has part: feature:361003-361087:-1:exon
so has part: feature:359446-359583:-1:exon
so has part: feature:358869-358949:-1:exon
so has part: feature:358198-358304:-1:exon
so has part: feature:357292-357432:-1:exon
so has part: feature:356937-357008:-1:exon
so has part: feature:356474-356552:-1:exon
so has part: feature:355978-356065:-1:exon
so has part: feature:355625-355736:-1:exon
so has part: feature:354457-354573:-1:exon
so has part: feature:353962-354320:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:380728-380977:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:379888-380019:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:379538-379783:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:375428-375496:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:374756-374851:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:373581-373689:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:372474-372566:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:371023-371104:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:370227-370291:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:361003-361087:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:359446-359583:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:358869-358949:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:358198-358304:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:357292-357432:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:356937-357008:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:356474-356552:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:355978-356065:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:355625-355736:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:354457-354573:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:353962-354320:-1:exon

GLB1L3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 419612
gene: GLB1L3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: beta-galactosidase-1-like protein 3 isoform X3
translation: MDGWAPSPEVMARPHLAWRRILCIFFLPFISSGFAPRIKYTDKFIFGKEPLTSSKPRASTVPFFPAVRFNWSHLTPLELKDRSVGLQAEEGVGRNPYFTLEGHEFLIFGGSIHYFRVPREYWRDRLLKLRACGFNTVTTYVPWNLHEPESGKFDFSGNLDLEAFVLLAAEVGLWVILRPGPYVCSELDLGGLPSRLLQDPTTQLRTTNRTFVEAVDKYFDHLIARVVPLQYRKGGPIIAVQVENEYGSFNKDKNYMPYLHKALLERGVVELLLTSDNTNKVLNGHIKGVLATINMNSFRADTFEQLFKVQKNKPILIMEYWVGWFDTWGKRHTPTDAGDVENTVTEFIQLDISFNVYMFHGGTNFGFMNGGIHFTHYRAVITSYDYDAVLTEAGDYTDKYFKLRKLFQSVFVTPLPLLPKPTHKAVYPSMRLSLYLPLWDVLQYLNRPVVSRTPLNMENLPIHGGNGQAFGLVLYEATICSGGRLHVEARDAAQVFLNETSLGILADETQNVDVPTITECQLLRILVENQGRVNFSWKIQDQRKGIIGSVTINSVPLENFTIYSLEMRTSFFRRLRTAIWRPVSDDHLGPAFYLGTLKAGSSPRDTFLALPSWKYGFVFINGRNLGRYWNIGPQGTLYLPGAWLNPGNNEIILFEKRKSGSYIYSTDKPVL
SIO_010081: GLB1L3
subclass of: SO_0000673
so part of: GLB1L3
location: complement(join(354255..354320,354457..354573,355625..355736,355978..356065,356474..356552,356937..357008,357292..357432,358198..358304,358869..358949,359446..359583,361003..361087,370227..370291,371023..371104,372474..372566,373581..373689,374756..374851,375428..375496,379538..379783,379888..380019,386592..386629))
location: region:354255-386629:-1
so has part: feature:386592-386629:-1:exon
so has part: feature:379888-380019:-1:exon
so has part: feature:379538-379783:-1:exon
so has part: feature:375428-375496:-1:exon
so has part: feature:374756-374851:-1:exon
so has part: feature:373581-373689:-1:exon
so has part: feature:372474-372566:-1:exon
so has part: feature:371023-371104:-1:exon
so has part: feature:370227-370291:-1:exon
so has part: feature:361003-361087:-1:exon
so has part: feature:359446-359583:-1:exon
so has part: feature:358869-358949:-1:exon
so has part: feature:358198-358304:-1:exon
so has part: feature:357292-357432:-1:exon
so has part: feature:356937-357008:-1:exon
so has part: feature:356474-356552:-1:exon
so has part: feature:355978-356065:-1:exon
so has part: feature:355625-355736:-1:exon
so has part: feature:354457-354573:-1:exon
so has part: feature:354255-354320:-1:exon

XP_032328169.1
type: Protein
SIO_000068: ncbiprotein

position:354255:-1
position: 354255
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:386629:-1
position: 386629
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:386592-386629:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:379888-380019:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:379538-379783:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:375428-375496:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:374756-374851:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:373581-373689:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:372474-372566:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:371023-371104:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:370227-370291:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:361003-361087:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:359446-359583:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:358869-358949:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:358198-358304:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:357292-357432:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:356937-357008:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:356474-356552:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:355978-356065:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:355625-355736:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:354457-354573:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:354255-354320:-1:exon

GLB1L3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 419612
gene: GLB1L3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: beta-galactosidase-1-like protein 3 isoform X2
translation: MQGSASLTVQSLPLCLGLWIPAQRTPESAALGSGQQRGDGSSVGRGLLGLAVMGPPPRFSPHLAWRRILCIFFLPFISSGFAPRIKYTDKFIFGKEPLTSSKPRASTVPFFPAVRFNWSHLTPLELKDRSVGLQAEEGVGRNPYFTLEGHEFLIFGGSIHYFRVPREYWRDRLLKLRACGFNTVTTYVPWNLHEPESGKFDFSGNLDLEAFVLLAAEVGLWVILRPGPYVCSELDLGGLPSRLLQDPTTQLRTTNRTFVEAVDKYFDHLIARVVPLQYRKGGPIIAVQVENEYGSFNKDKNYMPYLHKALLERGVVELLLTSDNTNKVLNGHIKGVLATINMNSFRADTFEQLFKVQNKPILIMEYWVGWFDTWGKRHTPTDAGDVENTVTEFIQLDISFNVYMFHGGTNFGFMNGGIHFTHYRAVITSYDYDAVLTEAGDYTDKYFKLRKLFQSVFVTPLPLLPKPTHKAVYPSMRLSLYLPLWDVLQYLNRPVVSRTPLNMENLPIHGGNGQAFGLVLYEATICSGGRLHVEARDAAQVFLNETSLGILADETQNVDVPTITECQLLRILVENQGRVNFSWKIQDQRKGIIGSVTINSVPLENFTIYSLEMRTSFFRRLRTAIWRPVSDDHLGPAFYLGTLKAGSSPRDTFLALPSWKYGFVFINGRNLGRYWNIGPQGTLYLPGAWLNPGNNEIILFEKRKSGSYIYSTDKPVL
SIO_010081: GLB1L3
subclass of: SO_0000673
so part of: GLB1L3
location: complement(join(354255..354320,354457..354573,355625..355736,355978..356065,356474..356552,356937..357008,357292..357432,358198..358304,358869..358949,359446..359583,361003..361084,370227..370291,371023..371104,372474..372566,373581..373689,374756..374851,375428..375496,379538..379783,379888..380019,380728..380906))
location: region:354255-380906:-1
so has part: feature:380728-380906:-1:exon
so has part: feature:379888-380019:-1:exon
so has part: feature:379538-379783:-1:exon
so has part: feature:375428-375496:-1:exon
so has part: feature:374756-374851:-1:exon
so has part: feature:373581-373689:-1:exon
so has part: feature:372474-372566:-1:exon
so has part: feature:371023-371104:-1:exon
so has part: feature:370227-370291:-1:exon
so has part: feature:361003-361084:-1:exon
so has part: feature:359446-359583:-1:exon
so has part: feature:358869-358949:-1:exon
so has part: feature:358198-358304:-1:exon
so has part: feature:357292-357432:-1:exon
so has part: feature:356937-357008:-1:exon
so has part: feature:356474-356552:-1:exon
so has part: feature:355978-356065:-1:exon
so has part: feature:355625-355736:-1:exon
so has part: feature:354457-354573:-1:exon
so has part: feature:354255-354320:-1:exon

XP_032328168.1
type: Protein
SIO_000068: ncbiprotein

position:380906:-1
position: 380906
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:380728-380906:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:379888-380019:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:379538-379783:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:375428-375496:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:374756-374851:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:373581-373689:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:372474-372566:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:371023-371104:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:370227-370291:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:361003-361084:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:359446-359583:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:358869-358949:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:358198-358304:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:357292-357432:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:356937-357008:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:356474-356552:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:355978-356065:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:355625-355736:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:354457-354573:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:354255-354320:-1:exon

GLB1L3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 419612
gene: GLB1L3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: beta-galactosidase-1-like protein 3 isoform X1
translation: MQGSASLTVQSLPLCLGLWIPAQRTPESAALGSGQQRGDGSSVGRGLLGLAVMGPPPRFSPHLAWRRILCIFFLPFISSGFAPRIKYTDKFIFGKEPLTSSKPRASTVPFFPAVRFNWSHLTPLELKDRSVGLQAEEGVGRNPYFTLEGHEFLIFGGSIHYFRVPREYWRDRLLKLRACGFNTVTTYVPWNLHEPESGKFDFSGNLDLEAFVLLAAEVGLWVILRPGPYVCSELDLGGLPSRLLQDPTTQLRTTNRTFVEAVDKYFDHLIARVVPLQYRKGGPIIAVQVENEYGSFNKDKNYMPYLHKALLERGVVELLLTSDNTNKVLNGHIKGVLATINMNSFRADTFEQLFKVQKNKPILIMEYWVGWFDTWGKRHTPTDAGDVENTVTEFIQLDISFNVYMFHGGTNFGFMNGGIHFTHYRAVITSYDYDAVLTEAGDYTDKYFKLRKLFQSVFVTPLPLLPKPTHKAVYPSMRLSLYLPLWDVLQYLNRPVVSRTPLNMENLPIHGGNGQAFGLVLYEATICSGGRLHVEARDAAQVFLNETSLGILADETQNVDVPTITECQLLRILVENQGRVNFSWKIQDQRKGIIGSVTINSVPLENFTIYSLEMRTSFFRRLRTAIWRPVSDDHLGPAFYLGTLKAGSSPRDTFLALPSWKYGFVFINGRNLGRYWNIGPQGTLYLPGAWLNPGNNEIILFEKRKSGSYIYSTDKPVL
SIO_010081: GLB1L3
subclass of: SO_0000673
so part of: GLB1L3
location: complement(join(354255..354320,354457..354573,355625..355736,355978..356065,356474..356552,356937..357008,357292..357432,358198..358304,358869..358949,359446..359583,361003..361087,370227..370291,371023..371104,372474..372566,373581..373689,374756..374851,375428..375496,379538..379783,379888..380019,380728..380906))
location: region:354255-380906:-1
so has part: feature:380728-380906:-1:exon
so has part: feature:379888-380019:-1:exon
so has part: feature:379538-379783:-1:exon
so has part: feature:375428-375496:-1:exon
so has part: feature:374756-374851:-1:exon
so has part: feature:373581-373689:-1:exon
so has part: feature:372474-372566:-1:exon
so has part: feature:371023-371104:-1:exon
so has part: feature:370227-370291:-1:exon
so has part: feature:361003-361087:-1:exon
so has part: feature:359446-359583:-1:exon
so has part: feature:358869-358949:-1:exon
so has part: feature:358198-358304:-1:exon
so has part: feature:357292-357432:-1:exon
so has part: feature:356937-357008:-1:exon
so has part: feature:356474-356552:-1:exon
so has part: feature:355978-356065:-1:exon
so has part: feature:355625-355736:-1:exon
so has part: feature:354457-354573:-1:exon
so has part: feature:354255-354320:-1:exon

XP_032328167.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:380728-380906:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:379888-380019:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:379538-379783:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:375428-375496:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:374756-374851:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:373581-373689:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:372474-372566:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:371023-371104:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:370227-370291:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:361003-361087:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:359446-359583:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:358869-358949:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:358198-358304:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:357292-357432:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:356937-357008:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:356474-356552:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:355978-356065:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:355625-355736:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:354457-354573:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:354255-354320:-1:exon

GLB1L3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 419612
gene: GLB1L3
product: galactosidase beta 1 like 3, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_032472279.1
SIO_010081: GLB1L3
subclass of: SO_0000673
so part of: GLB1L3
location: complement(join(355625..355736,355978..356037,356474..356552,356937..357008,357292..357432,358198..358304,358869..358949,359446..359583,361003..361087,370227..370291,371023..371104,372474..372566,373581..373689,374756..374851,375428..375496,379538..379783,379888..380019,380728..380982))
location: region:355625-380982:-1
so has part: feature:380728-380982:-1:exon
so has part: feature:379888-380019:-1:exon
so has part: feature:379538-379783:-1:exon
so has part: feature:375428-375496:-1:exon
so has part: feature:374756-374851:-1:exon
so has part: feature:373581-373689:-1:exon
so has part: feature:372474-372566:-1:exon
so has part: feature:371023-371104:-1:exon
so has part: feature:370227-370291:-1:exon
so has part: feature:361003-361087:-1:exon
so has part: feature:359446-359583:-1:exon
so has part: feature:358869-358949:-1:exon
so has part: feature:358198-358304:-1:exon
so has part: feature:357292-357432:-1:exon
so has part: feature:356937-357008:-1:exon
so has part: feature:356474-356552:-1:exon
so has part: feature:355978-356037:-1:exon
so has part: feature:355625-355736:-1:exon

position:380982:-1
position: 380982
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:380728-380982:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:379888-380019:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:379538-379783:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:375428-375496:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:374756-374851:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:373581-373689:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:372474-372566:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:371023-371104:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:370227-370291:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:361003-361087:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:359446-359583:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:358869-358949:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:358198-358304:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:357292-357432:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:356937-357008:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:356474-356552:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:355978-356037:-1:exon

position:356037:-1
position: 356037
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:355625-355736:-1:exon

GLB1L3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 419612
gene: GLB1L3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: beta-galactosidase-1-like protein 3 isoform X4
translation: MQGSASLTVQSLPLCLGLWIPAQRTPESAALGSGQQRGDGSSVGRGLLGLAVMGPPPRFSPHLAWRRILCIFFLPFISSGFAPRIKYTDKFIFGKEPLTSSKPRASTVPFFPAVRFNWSHLTPLELKDRSVGLQAEEGVGRNPYFTLEGHEFLIFGGSIHYFRVPREYWRDRLLKLRACGFNTVTTYVPWNLHEPESGKFDFSGNLDLEAFVLLAAEVGLWVILRPGPYVCSELDLGGLPSRLLQDPTTQLRTTNRTFVEAVDKYFDHLIARVVPLQYRKGGPIIAVQVENEYGSFNKDKNYMPYLHKALLERGVVELLLTSDNTNKVLNGHIKGVLATINMNSFRADTFEQLFKVQKNKPILIMEYWVGWFDTWGKRHTPTDAGDVENTVTEFIQLDISFNVYMFHGGTNFGFMNGGIHFTHYRAVITSYDYDAVLTEAGDYTDKYFKLRKLFQSVFVTPLPLLPKPTHKAVYPSMRLSLYLPLWDVLQYLNRPVVSRTPLNMENLPIHGGNGQAFGLVLYEATICSGGRLHVEARDAAQVFLNETSLGILADETQNVDVPTITECQLLRILVENQGRVNFSWKIQDQRKVFPWRTSLSTPWK
SIO_010081: GLB1L3
subclass of: SO_0000673
so part of: GLB1L3
location: complement(join(355997..356037,356474..356552,356937..357008,357292..357432,358198..358304,358869..358949,359446..359583,361003..361087,370227..370291,371023..371104,372474..372566,373581..373689,374756..374851,375428..375496,379538..379783,379888..380019,380728..380906))
location: region:355997-380906:-1
so has part: feature:380728-380906:-1:exon
so has part: feature:379888-380019:-1:exon
so has part: feature:379538-379783:-1:exon
so has part: feature:375428-375496:-1:exon
so has part: feature:374756-374851:-1:exon
so has part: feature:373581-373689:-1:exon
so has part: feature:372474-372566:-1:exon
so has part: feature:371023-371104:-1:exon
so has part: feature:370227-370291:-1:exon
so has part: feature:361003-361087:-1:exon
so has part: feature:359446-359583:-1:exon
so has part: feature:358869-358949:-1:exon
so has part: feature:358198-358304:-1:exon
so has part: feature:357292-357432:-1:exon
so has part: feature:356937-357008:-1:exon
so has part: feature:356474-356552:-1:exon
so has part: feature:355997-356037:-1:exon

XP_032328170.1
type: Protein
SIO_000068: ncbiprotein

position:355997:-1
position: 355997
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:380728-380906:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:379888-380019:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:379538-379783:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:375428-375496:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:374756-374851:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:373581-373689:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:372474-372566:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:371023-371104:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:370227-370291:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:361003-361087:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:359446-359583:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:358869-358949:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:358198-358304:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:357292-357432:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:356937-357008:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:356474-356552:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:355997-356037:-1:exon

LOC102505559
type: Gene
subclass of: SO_0000704
RO_0002162: 419612
gene: LOC102505559
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(387280..420698)
location: region:387280-420698:-1
so has part: feature:387280-420698:-1:exon
subclass of: SO_0000010

102505559
type: Gene
SIO_000068: ncbigene

position:387280:-1
position: 387280
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:420698:-1
position: 420698
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:387280-420698:-1:exon

LOC102505559
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 419612
gene: LOC102505559
product: beta-galactosidase-1-like protein 2, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 14 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 12 samples with support for all annotated introns
transcript id: XM_032472271.1
SIO_010081: LOC102505559
subclass of: SO_0000673
so part of: LOC102505559
location: complement(join(387280..387524,388127..388190,388295..388411,389051..389162,389485..389572,390274..390361,390880..390951,391711..391857,395148..395254,395851..395958,396573..396710,397290..397374,403216..403280,404164..404245,405292..405384,408115..408223,409454..409549,410954..411022,418987..419184,419327..419419,419904..420640))
location: region:387280-420640:-1
so has part: feature:419904-420640:-1:exon
so has part: feature:419327-419419:-1:exon
so has part: feature:418987-419184:-1:exon
so has part: feature:410954-411022:-1:exon
so has part: feature:409454-409549:-1:exon
so has part: feature:408115-408223:-1:exon
so has part: feature:405292-405384:-1:exon
so has part: feature:404164-404245:-1:exon
so has part: feature:403216-403280:-1:exon
so has part: feature:397290-397374:-1:exon
so has part: feature:396573-396710:-1:exon
so has part: feature:395851-395958:-1:exon
so has part: feature:395148-395254:-1:exon
so has part: feature:391711-391857:-1:exon
so has part: feature:390880-390951:-1:exon
so has part: feature:390274-390361:-1:exon
so has part: feature:389485-389572:-1:exon
so has part: feature:389051-389162:-1:exon
so has part: feature:388295-388411:-1:exon
so has part: feature:388127-388190:-1:exon
so has part: feature:387280-387524:-1:exon

position:420640:-1
position: 420640
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:419904-420640:-1:exon

position:419904:-1
position: 419904
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:419327-419419:-1:exon

position:419327:-1
position: 419327
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:419419:-1
position: 419419
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:418987-419184:-1:exon

position:418987:-1
position: 418987
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:419184:-1
position: 419184
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:410954-411022:-1:exon

position:410954:-1
position: 410954
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:411022:-1
position: 411022
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:409454-409549:-1:exon

position:409454:-1
position: 409454
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:409549:-1
position: 409549
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:408115-408223:-1:exon

position:408115:-1
position: 408115
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:408223:-1
position: 408223
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:405292-405384:-1:exon

position:405292:-1
position: 405292
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:405384:-1
position: 405384
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:404164-404245:-1:exon

position:404164:-1
position: 404164
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:404245:-1
position: 404245
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:403216-403280:-1:exon

position:403216:-1
position: 403216
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:403280:-1
position: 403280
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:397290-397374:-1:exon

position:397290:-1
position: 397290
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:397374:-1
position: 397374
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:396573-396710:-1:exon

position:396573:-1
position: 396573
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:396710:-1
position: 396710
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:395851-395958:-1:exon

position:395851:-1
position: 395851
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:395958:-1
position: 395958
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:395148-395254:-1:exon

position:395148:-1
position: 395148
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:395254:-1
position: 395254
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:391711-391857:-1:exon

position:391711:-1
position: 391711
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:391857:-1
position: 391857
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:390880-390951:-1:exon

position:390880:-1
position: 390880
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:390951:-1
position: 390951
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:390274-390361:-1:exon

position:390274:-1
position: 390274
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:390361:-1
position: 390361
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:389485-389572:-1:exon

position:389485:-1
position: 389485
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:389572:-1
position: 389572
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:389051-389162:-1:exon

position:389051:-1
position: 389051
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:389162:-1
position: 389162
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:388295-388411:-1:exon

position:388295:-1
position: 388295
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:388411:-1
position: 388411
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:388127-388190:-1:exon

position:388127:-1
position: 388127
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:388190:-1
position: 388190
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:387280-387524:-1:exon

position:387524:-1
position: 387524
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC102505559
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 419612
gene: LOC102505559
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: beta-galactosidase-1-like protein 2 isoform X5
translation: MQTWGGGLRRRPVQGWGSKPRAGVRPPGELGAGLSPSADFPARGPPCRPAPRPRSPAGPRSARTLRSTPQREEKRGPHGRMQTLLVRLVALLGLMSRLLETSALTGAPWGRASRVFLSPSQVKDRRLGLKVKDSNFTLGGFPSLILAGTIHYFRVPKEYWRDRLLKLKACGFNTVTTHVPWNLHEPRRGQFQFTGNLDLAVFISMALEVDLWVILCPGPYIGSDLDLGGLPSWLLRDPKMKLRTTYKGFTKAVNHYFDELIPRIVSLQVQEDGPIIAVQLENEYGSYHMDKKYMPYVKKALVTRGVKTLLMTADTGQDLTGGHVKNVLATLHLRSINKATYETLSSFQGPSPVLMTVYTASAPDGWGALRHSLDPHLVMRDAREMLAFRFSLNFYMFHGGTNFGFMGGSAPLHNYLSTVTSYDYGALLTEDGDYTPEYVTFQELFRSVTVPSHNLSPNEVHRPPQPESRPRVVYKPVAATYYMSLWDALPYLDEPTLSAKPVSMEKLSVNQGSGQSSGYILYETAISSGGLLTSRGHVQDRGQVFLDNLYIGVLDHASTELTLPRRSDYEGSQMLRILVENQGRLAYGPDINKERKGLTGDIYLNKSPLRKFKIYSLEMKPKFIQRDLPNIWKPALFQPRGPAFFLGLLRVGDHPRDTFIKMQDWTKGVIFINGQNLGRYWNIGPQETLYLPGPWLQPGANEIVVFEEWKSALVIQFTDSPQLGY
SIO_010081: LOC102505559
subclass of: SO_0000673
so part of: LOC102505559
location: complement(join(387517..387524,388127..388190,388295..388411,389051..389162,389485..389572,390274..390361,390880..390951,391711..391857,395148..395254,395851..395958,396573..396710,397290..397374,403216..403280,404164..404245,405292..405384,408115..408223,409454..409549,410954..411022,418987..419184,419327..419419,419904..420142))
location: region:387517-420142:-1
so has part: feature:419904-420142:-1:exon
so has part: feature:419327-419419:-1:exon
so has part: feature:418987-419184:-1:exon
so has part: feature:410954-411022:-1:exon
so has part: feature:409454-409549:-1:exon
so has part: feature:408115-408223:-1:exon
so has part: feature:405292-405384:-1:exon
so has part: feature:404164-404245:-1:exon
so has part: feature:403216-403280:-1:exon
so has part: feature:397290-397374:-1:exon
so has part: feature:396573-396710:-1:exon
so has part: feature:395851-395958:-1:exon
so has part: feature:395148-395254:-1:exon
so has part: feature:391711-391857:-1:exon
so has part: feature:390880-390951:-1:exon
so has part: feature:390274-390361:-1:exon
so has part: feature:389485-389572:-1:exon
so has part: feature:389051-389162:-1:exon
so has part: feature:388295-388411:-1:exon
so has part: feature:388127-388190:-1:exon
so has part: feature:387517-387524:-1:exon

XP_032328162.1
type: Protein
SIO_000068: ncbiprotein

position:387517:-1
position: 387517
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:420142:-1
position: 420142
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:419904-420142:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:419327-419419:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:418987-419184:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:410954-411022:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:409454-409549:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:408115-408223:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:405292-405384:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:404164-404245:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:403216-403280:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:397290-397374:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:396573-396710:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:395851-395958:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:395148-395254:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:391711-391857:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:390880-390951:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:390274-390361:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:389485-389572:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:389051-389162:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:388295-388411:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:388127-388190:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:387517-387524:-1:exon

LOC102505559
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 419612
gene: LOC102505559
product: beta-galactosidase-1-like protein 2, transcript variant X8
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 14 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_032472274.1
SIO_010081: LOC102505559
subclass of: SO_0000673
so part of: LOC102505559
location: complement(join(387531..387815,388127..388190,388295..388411,389051..389162,389485..389572,390274..390361,390880..390951,391711..391857,395148..395254,395851..395958,396573..396710,397290..397374,403216..403280,404164..404245,405292..405384,408115..408223,409454..409549,410954..411022,418987..419184,419327..419419,420668..420698))
location: region:387531-420698:-1
so has part: feature:420668-420698:-1:exon
so has part: feature:419327-419419:-1:exon
so has part: feature:418987-419184:-1:exon
so has part: feature:410954-411022:-1:exon
so has part: feature:409454-409549:-1:exon
so has part: feature:408115-408223:-1:exon
so has part: feature:405292-405384:-1:exon
so has part: feature:404164-404245:-1:exon
so has part: feature:403216-403280:-1:exon
so has part: feature:397290-397374:-1:exon
so has part: feature:396573-396710:-1:exon
so has part: feature:395851-395958:-1:exon
so has part: feature:395148-395254:-1:exon
so has part: feature:391711-391857:-1:exon
so has part: feature:390880-390951:-1:exon
so has part: feature:390274-390361:-1:exon
so has part: feature:389485-389572:-1:exon
so has part: feature:389051-389162:-1:exon
so has part: feature:388295-388411:-1:exon
so has part: feature:388127-388190:-1:exon
so has part: feature:387531-387815:-1:exon

position:387531:-1
position: 387531
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:420668-420698:-1:exon

position:420668:-1
position: 420668
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:419327-419419:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:418987-419184:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:410954-411022:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:409454-409549:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:408115-408223:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:405292-405384:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:404164-404245:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:403216-403280:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:397290-397374:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:396573-396710:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:395851-395958:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:395148-395254:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:391711-391857:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:390880-390951:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:390274-390361:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:389485-389572:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:389051-389162:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:388295-388411:-1:exon

urn:…
SIO_000300: 20
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urn:…
SIO_000300: 21
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position:387815:-1
position: 387815
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC102505559
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 419612
gene: LOC102505559
product: beta-galactosidase-1-like protein 2, transcript variant X7
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 14 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
transcript id: XM_032472273.1
SIO_010081: LOC102505559
subclass of: SO_0000673
so part of: LOC102505559
location: complement(join(387531..387815,388127..388190,388295..388411,389051..389162,389485..389572,390274..390361,390880..390951,391711..391857,395148..395254,395851..395958,396573..396710,397290..397374,403216..403280,404164..404245,405292..405384,408115..408223,409454..409549,410954..411022,418987..419184,419327..419419,420485..420655))
location: region:387531-420655:-1
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position:420655:-1
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SIO_000300: 21
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LOC102505559
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 419612
gene: LOC102505559
product: beta-galactosidase-1-like protein 2, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 14 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_032472268.1
SIO_010081: LOC102505559
subclass of: SO_0000673
so part of: LOC102505559
location: complement(join(387531..387815,388127..388190,388295..388411,389051..389162,389485..389572,390274..390361,390880..390951,391711..391857,395148..395254,395851..395958,396573..396710,397290..397374,403216..403280,404164..404245,405292..405384,408115..408223,409454..409549,410954..411022,418987..419184,419327..419419,420215..420655))
location: region:387531-420655:-1
so has part: feature:420215-420655:-1:exon
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so has part: feature:418987-419184:-1:exon
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urn:…
SIO_000300: 1
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SIO_000300: 21
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LOC102505559
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 419612
gene: LOC102505559
product: beta-galactosidase-1-like protein 2, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XM_032472270.1
SIO_010081: LOC102505559
subclass of: SO_0000673
so part of: LOC102505559
location: complement(join(387531..387815,388127..388190,388295..388411,389051..389162,389485..389572,390274..390361,390880..390951,391711..391857,395148..395254,395851..395958,397290..397374,403216..403280,404164..404245,405292..405384,408115..408223,409454..409549,410954..411022,418987..419184,419327..419419,419904..420645))
location: region:387531-420645:-1
so has part: feature:419904-420645:-1:exon
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position:420645:-1
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urn:…
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SIO_000300: 19
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urn:…
SIO_000300: 20
SIO_000628: feature:387531-387815:-1:exon

LOC102505559
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 419612
gene: LOC102505559
product: beta-galactosidase-1-like protein 2, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 14 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XM_032472267.1
SIO_010081: LOC102505559
subclass of: SO_0000673
so part of: LOC102505559
location: complement(join(387531..387815,388127..388190,388295..388411,389051..389162,389485..389572,390274..390361,390880..390951,391711..391857,395148..395254,395851..395958,396573..396710,397290..397374,403216..403280,404164..404245,405292..405384,408115..408223,409454..409549,410954..411022,418987..419184,419327..419419,419904..420643))
location: region:387531-420643:-1
so has part: feature:419904-420643:-1:exon
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position:420643:-1
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urn:…
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SIO_000300: 21
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LOC102505559
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 419612
gene: LOC102505559
product: beta-galactosidase-1-like protein 2, transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 14 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
transcript id: XM_032472272.1
SIO_010081: LOC102505559
subclass of: SO_0000673
so part of: LOC102505559
location: complement(join(387531..387815,388127..388190,388295..388411,389051..389162,389485..389572,390274..390361,390880..390951,391711..391857,395148..395254,395851..395958,396573..396710,397290..397374,403216..403280,404164..404245,405292..405384,408115..408223,409454..409549,410954..411022,418987..419184,419327..419419,420361..420642))
location: region:387531-420642:-1
so has part: feature:420361-420642:-1:exon
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position:420642:-1
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urn:…
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urn:…
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LOC102505559
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 419612
gene: LOC102505559
product: beta-galactosidase-1-like protein 2, transcript variant X10
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_032472275.1
SIO_010081: LOC102505559
subclass of: SO_0000673
so part of: LOC102505559
location: complement(join(387531..387815,388127..388190,388295..388411,389051..389162,389485..389572,390274..390361,390880..390951,391711..391857,395148..395254,395851..395958,396573..396710,397290..397374,403216..403280,404164..404245,405292..405384,408115..408223,409454..409549,410954..411022,418987..419077,419327..419419,420361..420641))
location: region:387531-420641:-1
so has part: feature:420361-420641:-1:exon
so has part: feature:419327-419419:-1:exon
so has part: feature:418987-419077:-1:exon
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so has part: feature:391711-391857:-1:exon
so has part: feature:390880-390951:-1:exon
so has part: feature:390274-390361:-1:exon
so has part: feature:389485-389572:-1:exon
so has part: feature:389051-389162:-1:exon
so has part: feature:388295-388411:-1:exon
so has part: feature:388127-388190:-1:exon
so has part: feature:387531-387815:-1:exon

position:420641:-1
position: 420641
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:420361-420641:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:419327-419419:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:418987-419077:-1:exon

position:419077:-1
position: 419077
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:410954-411022:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:409454-409549:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:408115-408223:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:405292-405384:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:404164-404245:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:403216-403280:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:397290-397374:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:396573-396710:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:395851-395958:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:395148-395254:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:391711-391857:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:390880-390951:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:390274-390361:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:389485-389572:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:389051-389162:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:388295-388411:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:388127-388190:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:387531-387815:-1:exon

LOC102505559
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 419612
gene: LOC102505559
product: beta-galactosidase-1-like protein 2, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 14 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XM_032472269.1
SIO_010081: LOC102505559
subclass of: SO_0000673
so part of: LOC102505559
location: complement(join(387531..387815,388127..388190,388295..388411,389051..389162,389485..389572,390274..390361,390880..390951,391711..391857,395148..395254,395851..395958,396573..396710,397290..397374,403216..403280,404164..404245,405292..405384,408115..408223,409454..409549,410954..411022,418987..419184,419327..419419,419532..420045))
location: region:387531-420045:-1
so has part: feature:419532-420045:-1:exon
so has part: feature:419327-419419:-1:exon
so has part: feature:418987-419184:-1:exon
so has part: feature:410954-411022:-1:exon
so has part: feature:409454-409549:-1:exon
so has part: feature:408115-408223:-1:exon
so has part: feature:405292-405384:-1:exon
so has part: feature:404164-404245:-1:exon
so has part: feature:403216-403280:-1:exon
so has part: feature:397290-397374:-1:exon
so has part: feature:396573-396710:-1:exon
so has part: feature:395851-395958:-1:exon
so has part: feature:395148-395254:-1:exon
so has part: feature:391711-391857:-1:exon
so has part: feature:390880-390951:-1:exon
so has part: feature:390274-390361:-1:exon
so has part: feature:389485-389572:-1:exon
so has part: feature:389051-389162:-1:exon
so has part: feature:388295-388411:-1:exon
so has part: feature:388127-388190:-1:exon
so has part: feature:387531-387815:-1:exon

position:420045:-1
position: 420045
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:419532-420045:-1:exon

position:419532:-1
position: 419532
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:419327-419419:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:418987-419184:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:410954-411022:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:409454-409549:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:408115-408223:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:405292-405384:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:404164-404245:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:403216-403280:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:397290-397374:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:396573-396710:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:395851-395958:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:395148-395254:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:391711-391857:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:390880-390951:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:390274-390361:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:389485-389572:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:389051-389162:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:388295-388411:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:388127-388190:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:387531-387815:-1:exon

LOC102505559
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 419612
gene: LOC102505559
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: beta-galactosidase-1-like protein 2 isoform X2
translation: MSALRAGTWRPRRGREESRPVGGRGPCGPEPAEGVGERPRGGMQTLLVRLVALLGLMSRLLETSALTGAPWGRASRVFLSPSQVKDRRLGLKVKDSNFTLGGFPSLILAGTIHYFRVPKEYWRDRLLKLKACGFNTVTTHVPWNLHEPRRGQFQFTGNLDLAVFISMALEVDLWVILCPGPYIGSDLDLGGLPSWLLRDPKMKLRTTYKGFTKAVNHYFDELIPRIVSLQVQEDGPIIAVQLENEYGSYHMDKKYMPYVKKALVTRGVKTLLMTADTGQDLTGGHVKNVLATLHLRSINKATYETLSSFQGPSPVLMTVYTASAPDGWGALRHSLDPHLVMRDAREMLAFRFSLNFYMFHGGTNFGFMGGSAPLHNYLSTVTSYDYGALLTEDGDYTPEYVTFQELFRSVTVPSHNLSPNEVHRPPQPESRPRVVYKPVAATYYMSLWDALPYLDEPTLSAKPVSMEKLSVNQGSGQSSGYILYETAISSGGLLTSRGHVQDRGQVFLDNLYIGVLDHASTELTLPRRSDYEGSQMLRILVENQGRLAYGPDINKERKGLTGDIYLNKSPLRKFKIYSLEMKPKFIQRDLPNIWKPALFQPRGPAFFLGLLRVGDHPRDTFIKMQDWTKGVIFINGQNLGRYWNIGPQETLYLPGPWLQPGANEIVVFEEWKSALVIQFTDSPQLGHVSWDSPRCHGQRMQGPAPPGTYALFCQVGAWDPCTQPPTLLLSGAGSRYASGESPHPFR
SIO_010081: LOC102505559
subclass of: SO_0000673
so part of: LOC102505559
location: complement(join(387631..387815,388127..388190,388295..388411,389051..389162,389485..389572,390274..390361,390880..390951,391711..391857,395148..395254,395851..395958,396573..396710,397290..397374,403216..403280,404164..404245,405292..405384,408115..408223,409454..409549,410954..411022,418987..419184,419327..419419,420215..420339))
location: region:387631-420339:-1
so has part: feature:420215-420339:-1:exon
so has part: feature:419327-419419:-1:exon
so has part: feature:418987-419184:-1:exon
so has part: feature:410954-411022:-1:exon
so has part: feature:409454-409549:-1:exon
so has part: feature:408115-408223:-1:exon
so has part: feature:405292-405384:-1:exon
so has part: feature:404164-404245:-1:exon
so has part: feature:403216-403280:-1:exon
so has part: feature:397290-397374:-1:exon
so has part: feature:396573-396710:-1:exon
so has part: feature:395851-395958:-1:exon
so has part: feature:395148-395254:-1:exon
so has part: feature:391711-391857:-1:exon
so has part: feature:390880-390951:-1:exon
so has part: feature:390274-390361:-1:exon
so has part: feature:389485-389572:-1:exon
so has part: feature:389051-389162:-1:exon
so has part: feature:388295-388411:-1:exon
so has part: feature:388127-388190:-1:exon
so has part: feature:387631-387815:-1:exon

XP_032328159.1
type: Protein
SIO_000068: ncbiprotein

position:387631:-1
position: 387631
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:420339:-1
position: 420339
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:420215-420339:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:419327-419419:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:418987-419184:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:410954-411022:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:409454-409549:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:408115-408223:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:405292-405384:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:404164-404245:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:403216-403280:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:397290-397374:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:396573-396710:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:395851-395958:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:395148-395254:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:391711-391857:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:390880-390951:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:390274-390361:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:389485-389572:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:389051-389162:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:388295-388411:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:388127-388190:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:387631-387815:-1:exon

LOC102505559
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 419612
gene: LOC102505559
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: beta-galactosidase-1-like protein 2 isoform X4
translation: MQTWGGGLRRRPVQGWGSKPRAGVRPPGELGAGLSPSADFPARGPPCRPAPRPRSPAGPRSARTLRSTPQREEKRGPHGRMQTLLVRLVALLGLMSRLLETSALTGAPWGRASRVFLSPSQVKDRRLGLKVKDSNFTLGGFPSLILAGTIHYFRVPKEYWRDRLLKLKACGFNTVTTHVPWNLHEPRRGQFQFTGNLDLAVFISMALEVDLWVILCPGPYIGSDLDLGGLPSWLLRDPKMKLRTTYKGFTKAVNHYFDELIPRIVSLQVQEDGPIIAVQLENEYGSYHMDKKYMPYVKKALVTRGVKTLLMTADTGQDLTGGHVKNVLATLHLRSINKATYETLSSFQGPSPVLMTVYTASAPDGWGALRHSLDPHHYGALLTEDGDYTPEYVTFQELFRSVTVPSHNLSPNEVHRPPQPESRPRVVYKPVAATYYMSLWDALPYLDEPTLSAKPVSMEKLSVNQGSGQSSGYILYETAISSGGLLTSRGHVQDRGQVFLDNLYIGVLDHASTELTLPRRSDYEGSQMLRILVENQGRLAYGPDINKERKGLTGDIYLNKSPLRKFKIYSLEMKPKFIQRDLPNIWKPALFQPRGPAFFLGLLRVGDHPRDTFIKMQDWTKGVIFINGQNLGRYWNIGPQETLYLPGPWLQPGANEIVVFEEWKSALVIQFTDSPQLGHVSWDSPRCHGQRMQGPAPPGTYALFCQVGAWDPCTQPPTLLLSGAGSRYASGESPHPFR
SIO_010081: LOC102505559
subclass of: SO_0000673
so part of: LOC102505559
location: complement(join(387631..387815,388127..388190,388295..388411,389051..389162,389485..389572,390274..390361,390880..390951,391711..391857,395148..395254,395851..395958,397290..397374,403216..403280,404164..404245,405292..405384,408115..408223,409454..409549,410954..411022,418987..419184,419327..419419,419904..420142))
location: region:387631-420142:-1
so has part: feature:419904-420142:-1:exon
so has part: feature:419327-419419:-1:exon
so has part: feature:418987-419184:-1:exon
so has part: feature:410954-411022:-1:exon
so has part: feature:409454-409549:-1:exon
so has part: feature:408115-408223:-1:exon
so has part: feature:405292-405384:-1:exon
so has part: feature:404164-404245:-1:exon
so has part: feature:403216-403280:-1:exon
so has part: feature:397290-397374:-1:exon
so has part: feature:395851-395958:-1:exon
so has part: feature:395148-395254:-1:exon
so has part: feature:391711-391857:-1:exon
so has part: feature:390880-390951:-1:exon
so has part: feature:390274-390361:-1:exon
so has part: feature:389485-389572:-1:exon
so has part: feature:389051-389162:-1:exon
so has part: feature:388295-388411:-1:exon
so has part: feature:388127-388190:-1:exon
so has part: feature:387631-387815:-1:exon

XP_032328161.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:419904-420142:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:419327-419419:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:418987-419184:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:410954-411022:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:409454-409549:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:408115-408223:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:405292-405384:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:404164-404245:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:403216-403280:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:397290-397374:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:395851-395958:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:395148-395254:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:391711-391857:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:390880-390951:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:390274-390361:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:389485-389572:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:389051-389162:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:388295-388411:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:388127-388190:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:387631-387815:-1:exon

LOC102505559
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 419612
gene: LOC102505559
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: beta-galactosidase-1-like protein 2 isoform X1
translation: MQTWGGGLRRRPVQGWGSKPRAGVRPPGELGAGLSPSADFPARGPPCRPAPRPRSPAGPRSARTLRSTPQREEKRGPHGRMQTLLVRLVALLGLMSRLLETSALTGAPWGRASRVFLSPSQVKDRRLGLKVKDSNFTLGGFPSLILAGTIHYFRVPKEYWRDRLLKLKACGFNTVTTHVPWNLHEPRRGQFQFTGNLDLAVFISMALEVDLWVILCPGPYIGSDLDLGGLPSWLLRDPKMKLRTTYKGFTKAVNHYFDELIPRIVSLQVQEDGPIIAVQLENEYGSYHMDKKYMPYVKKALVTRGVKTLLMTADTGQDLTGGHVKNVLATLHLRSINKATYETLSSFQGPSPVLMTVYTASAPDGWGALRHSLDPHLVMRDAREMLAFRFSLNFYMFHGGTNFGFMGGSAPLHNYLSTVTSYDYGALLTEDGDYTPEYVTFQELFRSVTVPSHNLSPNEVHRPPQPESRPRVVYKPVAATYYMSLWDALPYLDEPTLSAKPVSMEKLSVNQGSGQSSGYILYETAISSGGLLTSRGHVQDRGQVFLDNLYIGVLDHASTELTLPRRSDYEGSQMLRILVENQGRLAYGPDINKERKGLTGDIYLNKSPLRKFKIYSLEMKPKFIQRDLPNIWKPALFQPRGPAFFLGLLRVGDHPRDTFIKMQDWTKGVIFINGQNLGRYWNIGPQETLYLPGPWLQPGANEIVVFEEWKSALVIQFTDSPQLGHVSWDSPRCHGQRMQGPAPPGTYALFCQVGAWDPCTQPPTLLLSGAGSRYASGESPHPFR
SIO_010081: LOC102505559
subclass of: SO_0000673
so part of: LOC102505559
location: complement(join(387631..387815,388127..388190,388295..388411,389051..389162,389485..389572,390274..390361,390880..390951,391711..391857,395148..395254,395851..395958,396573..396710,397290..397374,403216..403280,404164..404245,405292..405384,408115..408223,409454..409549,410954..411022,418987..419184,419327..419419,419904..420142))
location: region:387631-420142:-1
so has part: feature:419904-420142:-1:exon
so has part: feature:419327-419419:-1:exon
so has part: feature:418987-419184:-1:exon
so has part: feature:410954-411022:-1:exon
so has part: feature:409454-409549:-1:exon
so has part: feature:408115-408223:-1:exon
so has part: feature:405292-405384:-1:exon
so has part: feature:404164-404245:-1:exon
so has part: feature:403216-403280:-1:exon
so has part: feature:397290-397374:-1:exon
so has part: feature:396573-396710:-1:exon
so has part: feature:395851-395958:-1:exon
so has part: feature:395148-395254:-1:exon
so has part: feature:391711-391857:-1:exon
so has part: feature:390880-390951:-1:exon
so has part: feature:390274-390361:-1:exon
so has part: feature:389485-389572:-1:exon
so has part: feature:389051-389162:-1:exon
so has part: feature:388295-388411:-1:exon
so has part: feature:388127-388190:-1:exon
so has part: feature:387631-387815:-1:exon

XP_032328158.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:419904-420142:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:419327-419419:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:418987-419184:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:410954-411022:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:409454-409549:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:408115-408223:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:405292-405384:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:404164-404245:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:403216-403280:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:397290-397374:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:396573-396710:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:395851-395958:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:395148-395254:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:391711-391857:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:390880-390951:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:390274-390361:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:389485-389572:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:389051-389162:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:388295-388411:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:388127-388190:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:387631-387815:-1:exon

LOC102505559
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 419612
gene: LOC102505559
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: beta-galactosidase-1-like protein 2 isoform X3
translation: MQLSRSGQQTGPRGAPAGVQAPQKPKTAAQNSAFRMQTLLVRLVALLGLMSRLLETSALTGAPWGRASRVFLSPSQVKDRRLGLKVKDSNFTLGGFPSLILAGTIHYFRVPKEYWRDRLLKLKACGFNTVTTHVPWNLHEPRRGQFQFTGNLDLAVFISMALEVDLWVILCPGPYIGSDLDLGGLPSWLLRDPKMKLRTTYKGFTKAVNHYFDELIPRIVSLQVQEDGPIIAVQLENEYGSYHMDKKYMPYVKKALVTRGVKTLLMTADTGQDLTGGHVKNVLATLHLRSINKATYETLSSFQGPSPVLMTVYTASAPDGWGALRHSLDPHLVMRDAREMLAFRFSLNFYMFHGGTNFGFMGGSAPLHNYLSTVTSYDYGALLTEDGDYTPEYVTFQELFRSVTVPSHNLSPNEVHRPPQPESRPRVVYKPVAATYYMSLWDALPYLDEPTLSAKPVSMEKLSVNQGSGQSSGYILYETAISSGGLLTSRGHVQDRGQVFLDNLYIGVLDHASTELTLPRRSDYEGSQMLRILVENQGRLAYGPDINKERKGLTGDIYLNKSPLRKFKIYSLEMKPKFIQRDLPNIWKPALFQPRGPAFFLGLLRVGDHPRDTFIKMQDWTKGVIFINGQNLGRYWNIGPQETLYLPGPWLQPGANEIVVFEEWKSALVIQFTDSPQLGHVSWDSPRCHGQRMQGPAPPGTYALFCQVGAWDPCTQPPTLLLSGAGSRYASGESPHPFR
SIO_010081: LOC102505559
subclass of: SO_0000673
so part of: LOC102505559
location: complement(join(387631..387815,388127..388190,388295..388411,389051..389162,389485..389572,390274..390361,390880..390951,391711..391857,395148..395254,395851..395958,396573..396710,397290..397374,403216..403280,404164..404245,405292..405384,408115..408223,409454..409549,410954..411022,418987..419184,419327..419419,419532..419635))
location: region:387631-419635:-1
so has part: feature:419532-419635:-1:exon
so has part: feature:419327-419419:-1:exon
so has part: feature:418987-419184:-1:exon
so has part: feature:410954-411022:-1:exon
so has part: feature:409454-409549:-1:exon
so has part: feature:408115-408223:-1:exon
so has part: feature:405292-405384:-1:exon
so has part: feature:404164-404245:-1:exon
so has part: feature:403216-403280:-1:exon
so has part: feature:397290-397374:-1:exon
so has part: feature:396573-396710:-1:exon
so has part: feature:395851-395958:-1:exon
so has part: feature:395148-395254:-1:exon
so has part: feature:391711-391857:-1:exon
so has part: feature:390880-390951:-1:exon
so has part: feature:390274-390361:-1:exon
so has part: feature:389485-389572:-1:exon
so has part: feature:389051-389162:-1:exon
so has part: feature:388295-388411:-1:exon
so has part: feature:388127-388190:-1:exon
so has part: feature:387631-387815:-1:exon

XP_032328160.1
type: Protein
SIO_000068: ncbiprotein

position:419635:-1
position: 419635
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:419532-419635:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:419327-419419:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:418987-419184:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:410954-411022:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:409454-409549:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:408115-408223:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:405292-405384:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:404164-404245:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:403216-403280:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:397290-397374:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:396573-396710:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:395851-395958:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:395148-395254:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:391711-391857:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:390880-390951:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:390274-390361:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:389485-389572:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:389051-389162:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:388295-388411:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:388127-388190:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:387631-387815:-1:exon

LOC102505559
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 419612
gene: LOC102505559
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: beta-galactosidase-1-like protein 2 isoform X6
translation: MQTLLVRLVALLGLMSRLLETSALTGAPWGRASRVFLSPSQVKDRRLGLKVKDSNFTLGGFPSLILAGTIHYFRVPKEYWRDRLLKLKACGFNTVTTHVPWNLHEPRRGQFQFTGNLDLAVFISMALEVDLWVILCPGPYIGSDLDLGGLPSWLLRDPKMKLRTTYKGFTKAVNHYFDELIPRIVSLQVQEDGPIIAVQLENEYGSYHMDKKYMPYVKKALVTRGVKTLLMTADTGQDLTGGHVKNVLATLHLRSINKATYETLSSFQGPSPVLMTVYTASAPDGWGALRHSLDPHLVMRDAREMLAFRFSLNFYMFHGGTNFGFMGGSAPLHNYLSTVTSYDYGALLTEDGDYTPEYVTFQELFRSVTVPSHNLSPNEVHRPPQPESRPRVVYKPVAATYYMSLWDALPYLDEPTLSAKPVSMEKLSVNQGSGQSSGYILYETAISSGGLLTSRGHVQDRGQVFLDNLYIGVLDHASTELTLPRRSDYEGSQMLRILVENQGRLAYGPDINKERKGLTGDIYLNKSPLRKFKIYSLEMKPKFIQRDLPNIWKPALFQPRGPAFFLGLLRVGDHPRDTFIKMQDWTKGVIFINGQNLGRYWNIGPQETLYLPGPWLQPGANEIVVFEEWKSALVIQFTDSPQLGHVSWDSPRCHGQRMQGPAPPGTYALFCQVGAWDPCTQPPTLLLSGAGSRYASGESPHPFR
SIO_010081: LOC102505559
subclass of: SO_0000673
so part of: LOC102505559
location: complement(join(387631..387815,388127..388190,388295..388411,389051..389162,389485..389572,390274..390361,390880..390951,391711..391857,395148..395254,395851..395958,396573..396710,397290..397374,403216..403280,404164..404245,405292..405384,408115..408223,409454..409549,410954..411022,418987..419184,419327..419418))
location: region:387631-419418:-1
so has part: feature:419327-419418:-1:exon
so has part: feature:418987-419184:-1:exon
so has part: feature:410954-411022:-1:exon
so has part: feature:409454-409549:-1:exon
so has part: feature:408115-408223:-1:exon
so has part: feature:405292-405384:-1:exon
so has part: feature:404164-404245:-1:exon
so has part: feature:403216-403280:-1:exon
so has part: feature:397290-397374:-1:exon
so has part: feature:396573-396710:-1:exon
so has part: feature:395851-395958:-1:exon
so has part: feature:395148-395254:-1:exon
so has part: feature:391711-391857:-1:exon
so has part: feature:390880-390951:-1:exon
so has part: feature:390274-390361:-1:exon
so has part: feature:389485-389572:-1:exon
so has part: feature:389051-389162:-1:exon
so has part: feature:388295-388411:-1:exon
so has part: feature:388127-388190:-1:exon
so has part: feature:387631-387815:-1:exon

XP_032328163.1
type: Protein
SIO_000068: ncbiprotein

position:419418:-1
position: 419418
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:419327-419418:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:418987-419184:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:410954-411022:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:409454-409549:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:408115-408223:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:405292-405384:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:404164-404245:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:403216-403280:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:397290-397374:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:396573-396710:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:395851-395958:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:395148-395254:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:391711-391857:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:390880-390951:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:390274-390361:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:389485-389572:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:389051-389162:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:388295-388411:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:388127-388190:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:387631-387815:-1:exon

LOC102505559
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 419612
gene: LOC102505559
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: beta-galactosidase-1-like protein 2 isoform X6
translation: MQTLLVRLVALLGLMSRLLETSALTGAPWGRASRVFLSPSQVKDRRLGLKVKDSNFTLGGFPSLILAGTIHYFRVPKEYWRDRLLKLKACGFNTVTTHVPWNLHEPRRGQFQFTGNLDLAVFISMALEVDLWVILCPGPYIGSDLDLGGLPSWLLRDPKMKLRTTYKGFTKAVNHYFDELIPRIVSLQVQEDGPIIAVQLENEYGSYHMDKKYMPYVKKALVTRGVKTLLMTADTGQDLTGGHVKNVLATLHLRSINKATYETLSSFQGPSPVLMTVYTASAPDGWGALRHSLDPHLVMRDAREMLAFRFSLNFYMFHGGTNFGFMGGSAPLHNYLSTVTSYDYGALLTEDGDYTPEYVTFQELFRSVTVPSHNLSPNEVHRPPQPESRPRVVYKPVAATYYMSLWDALPYLDEPTLSAKPVSMEKLSVNQGSGQSSGYILYETAISSGGLLTSRGHVQDRGQVFLDNLYIGVLDHASTELTLPRRSDYEGSQMLRILVENQGRLAYGPDINKERKGLTGDIYLNKSPLRKFKIYSLEMKPKFIQRDLPNIWKPALFQPRGPAFFLGLLRVGDHPRDTFIKMQDWTKGVIFINGQNLGRYWNIGPQETLYLPGPWLQPGANEIVVFEEWKSALVIQFTDSPQLGHVSWDSPRCHGQRMQGPAPPGTYALFCQVGAWDPCTQPPTLLLSGAGSRYASGESPHPFR
SIO_010081: LOC102505559
subclass of: SO_0000673
so part of: LOC102505559
location: complement(join(387631..387815,388127..388190,388295..388411,389051..389162,389485..389572,390274..390361,390880..390951,391711..391857,395148..395254,395851..395958,396573..396710,397290..397374,403216..403280,404164..404245,405292..405384,408115..408223,409454..409549,410954..411022,418987..419184,419327..419418))
location: region:387631-419418:-1
so has part: feature:419327-419418:-1:exon
so has part: feature:418987-419184:-1:exon
so has part: feature:410954-411022:-1:exon
so has part: feature:409454-409549:-1:exon
so has part: feature:408115-408223:-1:exon
so has part: feature:405292-405384:-1:exon
so has part: feature:404164-404245:-1:exon
so has part: feature:403216-403280:-1:exon
so has part: feature:397290-397374:-1:exon
so has part: feature:396573-396710:-1:exon
so has part: feature:395851-395958:-1:exon
so has part: feature:395148-395254:-1:exon
so has part: feature:391711-391857:-1:exon
so has part: feature:390880-390951:-1:exon
so has part: feature:390274-390361:-1:exon
so has part: feature:389485-389572:-1:exon
so has part: feature:389051-389162:-1:exon
so has part: feature:388295-388411:-1:exon
so has part: feature:388127-388190:-1:exon
so has part: feature:387631-387815:-1:exon

XP_032328164.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:419327-419418:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:418987-419184:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:410954-411022:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:409454-409549:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:408115-408223:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:405292-405384:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:404164-404245:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:403216-403280:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:397290-397374:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:396573-396710:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:395851-395958:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:395148-395254:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:391711-391857:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:390880-390951:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:390274-390361:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:389485-389572:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:389051-389162:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:388295-388411:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:388127-388190:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:387631-387815:-1:exon

LOC102505559
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 419612
gene: LOC102505559
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: beta-galactosidase-1-like protein 2 isoform X6
translation: MQTLLVRLVALLGLMSRLLETSALTGAPWGRASRVFLSPSQVKDRRLGLKVKDSNFTLGGFPSLILAGTIHYFRVPKEYWRDRLLKLKACGFNTVTTHVPWNLHEPRRGQFQFTGNLDLAVFISMALEVDLWVILCPGPYIGSDLDLGGLPSWLLRDPKMKLRTTYKGFTKAVNHYFDELIPRIVSLQVQEDGPIIAVQLENEYGSYHMDKKYMPYVKKALVTRGVKTLLMTADTGQDLTGGHVKNVLATLHLRSINKATYETLSSFQGPSPVLMTVYTASAPDGWGALRHSLDPHLVMRDAREMLAFRFSLNFYMFHGGTNFGFMGGSAPLHNYLSTVTSYDYGALLTEDGDYTPEYVTFQELFRSVTVPSHNLSPNEVHRPPQPESRPRVVYKPVAATYYMSLWDALPYLDEPTLSAKPVSMEKLSVNQGSGQSSGYILYETAISSGGLLTSRGHVQDRGQVFLDNLYIGVLDHASTELTLPRRSDYEGSQMLRILVENQGRLAYGPDINKERKGLTGDIYLNKSPLRKFKIYSLEMKPKFIQRDLPNIWKPALFQPRGPAFFLGLLRVGDHPRDTFIKMQDWTKGVIFINGQNLGRYWNIGPQETLYLPGPWLQPGANEIVVFEEWKSALVIQFTDSPQLGHVSWDSPRCHGQRMQGPAPPGTYALFCQVGAWDPCTQPPTLLLSGAGSRYASGESPHPFR
SIO_010081: LOC102505559
subclass of: SO_0000673
so part of: LOC102505559
location: complement(join(387631..387815,388127..388190,388295..388411,389051..389162,389485..389572,390274..390361,390880..390951,391711..391857,395148..395254,395851..395958,396573..396710,397290..397374,403216..403280,404164..404245,405292..405384,408115..408223,409454..409549,410954..411022,418987..419184,419327..419418))
location: region:387631-419418:-1
so has part: feature:419327-419418:-1:exon
so has part: feature:418987-419184:-1:exon
so has part: feature:410954-411022:-1:exon
so has part: feature:409454-409549:-1:exon
so has part: feature:408115-408223:-1:exon
so has part: feature:405292-405384:-1:exon
so has part: feature:404164-404245:-1:exon
so has part: feature:403216-403280:-1:exon
so has part: feature:397290-397374:-1:exon
so has part: feature:396573-396710:-1:exon
so has part: feature:395851-395958:-1:exon
so has part: feature:395148-395254:-1:exon
so has part: feature:391711-391857:-1:exon
so has part: feature:390880-390951:-1:exon
so has part: feature:390274-390361:-1:exon
so has part: feature:389485-389572:-1:exon
so has part: feature:389051-389162:-1:exon
so has part: feature:388295-388411:-1:exon
so has part: feature:388127-388190:-1:exon
so has part: feature:387631-387815:-1:exon

XP_032328165.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:419327-419418:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:418987-419184:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:410954-411022:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:409454-409549:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:408115-408223:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:405292-405384:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:404164-404245:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:403216-403280:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:397290-397374:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:396573-396710:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:395851-395958:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:395148-395254:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:391711-391857:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:390880-390951:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:390274-390361:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:389485-389572:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:389051-389162:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:388295-388411:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:388127-388190:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:387631-387815:-1:exon

LOC102505559
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 419612
gene: LOC102505559
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: beta-galactosidase-1-like protein 2 isoform X7
translation: MALEVDLWVILCPGPYIGSDLDLGGLPSWLLRDPKMKLRTTYKGFTKAVNHYFDELIPRIVSLQVQEDGPIIAVQLENEYGSYHMDKKYMPYVKKALVTRGVKTLLMTADTGQDLTGGHVKNVLATLHLRSINKATYETLSSFQGPSPVLMTVYTASAPDGWGALRHSLDPHLVMRDAREMLAFRFSLNFYMFHGGTNFGFMGGSAPLHNYLSTVTSYDYGALLTEDGDYTPEYVTFQELFRSVTVPSHNLSPNEVHRPPQPESRPRVVYKPVAATYYMSLWDALPYLDEPTLSAKPVSMEKLSVNQGSGQSSGYILYETAISSGGLLTSRGHVQDRGQVFLDNLYIGVLDHASTELTLPRRSDYEGSQMLRILVENQGRLAYGPDINKERKGLTGDIYLNKSPLRKFKIYSLEMKPKFIQRDLPNIWKPALFQPRGPAFFLGLLRVGDHPRDTFIKMQDWTKGVIFINGQNLGRYWNIGPQETLYLPGPWLQPGANEIVVFEEWKSALVIQFTDSPQLGHVSWDSPRCHGQRMQGPAPPGTYALFCQVGAWDPCTQPPTLLLSGAGSRYASGESPHPFR
SIO_010081: LOC102505559
subclass of: SO_0000673
so part of: LOC102505559
location: complement(join(387631..387815,388127..388190,388295..388411,389051..389162,389485..389572,390274..390361,390880..390951,391711..391857,395148..395254,395851..395958,396573..396710,397290..397374,403216..403280,404164..404245,405292..405384,408115..408223,409454..409536))
location: region:387631-409536:-1
so has part: feature:409454-409536:-1:exon
so has part: feature:408115-408223:-1:exon
so has part: feature:405292-405384:-1:exon
so has part: feature:404164-404245:-1:exon
so has part: feature:403216-403280:-1:exon
so has part: feature:397290-397374:-1:exon
so has part: feature:396573-396710:-1:exon
so has part: feature:395851-395958:-1:exon
so has part: feature:395148-395254:-1:exon
so has part: feature:391711-391857:-1:exon
so has part: feature:390880-390951:-1:exon
so has part: feature:390274-390361:-1:exon
so has part: feature:389485-389572:-1:exon
so has part: feature:389051-389162:-1:exon
so has part: feature:388295-388411:-1:exon
so has part: feature:388127-388190:-1:exon
so has part: feature:387631-387815:-1:exon

XP_032328166.1
type: Protein
SIO_000068: ncbiprotein

position:409536:-1
position: 409536
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:409454-409536:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:408115-408223:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:405292-405384:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:404164-404245:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:403216-403280:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:397290-397374:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:396573-396710:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:395851-395958:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:395148-395254:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:391711-391857:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:390880-390951:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:390274-390361:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:389485-389572:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:389051-389162:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:388295-388411:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:388127-388190:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:387631-387815:-1:exon

LOC102505559
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 419612
gene: LOC102505559
product: beta-galactosidase-1-like protein 2, transcript variant X9
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 11 samples with support for all annotated introns
transcript id: XR_004316821.1
SIO_010081: LOC102505559
so part of: LOC102505559
location: complement(join(389025..389162,389348..389572,390274..390361,390880..390951,391711..391857,395148..395254,395851..395958,396573..396710,397290..397374,403216..403280,404164..404245,405292..405384,408115..408223,409454..409549,410954..411022,418987..419184,419327..419419,419904..420643))
location: region:389025-420643:-1
so has part: feature:419904-420643:-1:exon
so has part: feature:419327-419419:-1:exon
so has part: feature:418987-419184:-1:exon
so has part: feature:410954-411022:-1:exon
so has part: feature:409454-409549:-1:exon
so has part: feature:408115-408223:-1:exon
so has part: feature:405292-405384:-1:exon
so has part: feature:404164-404245:-1:exon
so has part: feature:403216-403280:-1:exon
so has part: feature:397290-397374:-1:exon
so has part: feature:396573-396710:-1:exon
so has part: feature:395851-395958:-1:exon
so has part: feature:395148-395254:-1:exon
so has part: feature:391711-391857:-1:exon
so has part: feature:390880-390951:-1:exon
so has part: feature:390274-390361:-1:exon
so has part: feature:389348-389572:-1:exon
so has part: feature:389025-389162:-1:exon

position:389025:-1
position: 389025
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:419904-420643:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:419327-419419:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:418987-419184:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:410954-411022:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:409454-409549:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:408115-408223:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:405292-405384:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:404164-404245:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:403216-403280:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:397290-397374:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:396573-396710:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:395851-395958:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:395148-395254:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:391711-391857:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:390880-390951:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:390274-390361:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:389348-389572:-1:exon

position:389348:-1
position: 389348
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:389025-389162:-1:exon

ACAD8
type: Gene
subclass of: SO_0000704
RO_0002162: 419612
gene: ACAD8
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(431433..449765)
location: region:431433-449765:-1
so has part: feature:431433-449765:-1:exon
subclass of: SO_0000010

102518842
type: Gene
SIO_000068: ncbigene

position:431433:-1
position: 431433
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:449765:-1
position: 449765
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:431433-449765:-1:exon

ACAD8
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 419612
gene: ACAD8
product: acyl-CoA dehydrogenase family member 8, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 mRNAs, 11 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 40 samples with support for all annotated introns
transcript id: XM_032472288.1
SIO_010081: ACAD8
subclass of: SO_0000673
so part of: ACAD8
location: complement(join(431433..432826,434443..434545,435087..435239,441216..441313,441401..441536,443613..443750,444069..444145,444573..444682,445269..445438,445885..445985,449574..449765))
location: region:431433-449765:-1
so has part: feature:449574-449765:-1:exon
so has part: feature:445885-445985:-1:exon
so has part: feature:445269-445438:-1:exon
so has part: feature:444573-444682:-1:exon
so has part: feature:444069-444145:-1:exon
so has part: feature:443613-443750:-1:exon
so has part: feature:441401-441536:-1:exon
so has part: feature:441216-441313:-1:exon
so has part: feature:435087-435239:-1:exon
so has part: feature:434443-434545:-1:exon
so has part: feature:431433-432826:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:449574-449765:-1:exon

position:449574:-1
position: 449574
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:445885-445985:-1:exon

position:445885:-1
position: 445885
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:445985:-1
position: 445985
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:445269-445438:-1:exon

position:445269:-1
position: 445269
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:445438:-1
position: 445438
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:444573-444682:-1:exon

position:444573:-1
position: 444573
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:444682:-1
position: 444682
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:444069-444145:-1:exon

position:444069:-1
position: 444069
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:444145:-1
position: 444145
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:443613-443750:-1:exon

position:443613:-1
position: 443613
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:443750:-1
position: 443750
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:441401-441536:-1:exon

position:441401:-1
position: 441401
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:441536:-1
position: 441536
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:441216-441313:-1:exon

position:441216:-1
position: 441216
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:441313:-1
position: 441313
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:435087-435239:-1:exon

position:435087:-1
position: 435087
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:435239:-1
position: 435239
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:434443-434545:-1:exon

position:434443:-1
position: 434443
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:434545:-1
position: 434545
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:431433-432826:-1:exon

position:432826:-1
position: 432826
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

ACAD8
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 419612
gene: ACAD8
product: acyl-CoA dehydrogenase family member 8, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 mRNAs, 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 35 samples with support for all annotated introns
transcript id: XM_006182580.3
SIO_010081: ACAD8
subclass of: SO_0000673
so part of: ACAD8
location: complement(join(431433..432826,434443..434545,435087..435239,441216..441313,441401..441536,443613..443750,444069..444145,444573..444682,445269..445438,445885..445985,449284..449553))
location: region:431433-449553:-1
so has part: feature:449284-449553:-1:exon
so has part: feature:445885-445985:-1:exon
so has part: feature:445269-445438:-1:exon
so has part: feature:444573-444682:-1:exon
so has part: feature:444069-444145:-1:exon
so has part: feature:443613-443750:-1:exon
so has part: feature:441401-441536:-1:exon
so has part: feature:441216-441313:-1:exon
so has part: feature:435087-435239:-1:exon
so has part: feature:434443-434545:-1:exon
so has part: feature:431433-432826:-1:exon

position:449553:-1
position: 449553
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:449284-449553:-1:exon

position:449284:-1
position: 449284
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:445885-445985:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:445269-445438:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:444573-444682:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:444069-444145:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:443613-443750:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:441401-441536:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:441216-441313:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:435087-435239:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:434443-434545:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:431433-432826:-1:exon

ACAD8
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 419612
gene: ACAD8
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: isobutyryl-CoA dehydrogenase, mitochondrial isoform X1
translation: MLRDSCWRVGARLCFLRAGVRAAAESGRRALVSCIDPSIGLNEEQKEFQKVAFNFAAREMAPHTAEWDQKELFPVDVMRKAAQLGFGGVYMRTDVGGSGLSRLDASVIFEALATGCTSTTAYISIHNMCAWMIDAFGSEEQRHRFCPPLCAMEKFASYCLTEPGSGSDAASLLTSAKRQGDHYVLNGTKAFISGGGEADTYVVMCRTGGPGPKGISCVVVEKGAPGLSFGKKEKKMGWNSQPTRAVIFEDCAVPVANRIGAEGQGFLIAMQGLNGGRVNIASCSLGAAHASVILARDHLKIRKQFGAPLANNQYLQFKLADMATRLVASRMMIRSAAVALQEEREDAVALCSMAKLFATDECFAICNQALQMHGGYGYLKDYVVQQYVRDTRVHQILEGSNEVMRMLVSRSLLQE
SIO_010081: ACAD8
subclass of: SO_0000673
so part of: ACAD8
location: complement(join(432774..432826,434443..434545,435087..435239,441216..441313,441401..441536,443613..443750,444069..444145,444573..444682,445269..445438,445885..445985,449574..449682))
location: region:432774-449682:-1
so has part: feature:449574-449682:-1:exon
so has part: feature:445885-445985:-1:exon
so has part: feature:445269-445438:-1:exon
so has part: feature:444573-444682:-1:exon
so has part: feature:444069-444145:-1:exon
so has part: feature:443613-443750:-1:exon
so has part: feature:441401-441536:-1:exon
so has part: feature:441216-441313:-1:exon
so has part: feature:435087-435239:-1:exon
so has part: feature:434443-434545:-1:exon
so has part: feature:432774-432826:-1:exon

XP_032328179.1
type: Protein
SIO_000068: ncbiprotein

position:432774:-1
position: 432774
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:449682:-1
position: 449682
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:449574-449682:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:445885-445985:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:445269-445438:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:444573-444682:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:444069-444145:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:443613-443750:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:441401-441536:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:441216-441313:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:435087-435239:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:434443-434545:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:432774-432826:-1:exon

ACAD8
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 419612
gene: ACAD8
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: isobutyryl-CoA dehydrogenase, mitochondrial isoform X2
translation: MAPHTAEWDQKELFPVDVMRKAAQLGFGGVYMRTDVGGSGLSRLDASVIFEALATGCTSTTAYISIHNMCAWMIDAFGSEEQRHRFCPPLCAMEKFASYCLTEPGSGSDAASLLTSAKRQGDHYVLNGTKAFISGGGEADTYVVMCRTGGPGPKGISCVVVEKGAPGLSFGKKEKKMGWNSQPTRAVIFEDCAVPVANRIGAEGQGFLIAMQGLNGGRVNIASCSLGAAHASVILARDHLKIRKQFGAPLANNQYLQFKLADMATRLVASRMMIRSAAVALQEEREDAVALCSMAKLFATDECFAICNQALQMHGGYGYLKDYVVQQYVRDTRVHQILEGSNEVMRMLVSRSLLQE
SIO_010081: ACAD8
subclass of: SO_0000673
so part of: ACAD8
location: complement(join(432774..432826,434443..434545,435087..435239,441216..441313,441401..441536,443613..443750,444069..444145,444573..444682,445269..445438,445885..445917))
location: region:432774-445917:-1
so has part: feature:445885-445917:-1:exon
so has part: feature:445269-445438:-1:exon
so has part: feature:444573-444682:-1:exon
so has part: feature:444069-444145:-1:exon
so has part: feature:443613-443750:-1:exon
so has part: feature:441401-441536:-1:exon
so has part: feature:441216-441313:-1:exon
so has part: feature:435087-435239:-1:exon
so has part: feature:434443-434545:-1:exon
so has part: feature:432774-432826:-1:exon

XP_006182642.1
type: Protein
SIO_000068: ncbiprotein

position:445917:-1
position: 445917
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:445885-445917:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:445269-445438:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:444573-444682:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:444069-444145:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:443613-443750:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:441401-441536:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:441216-441313:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:435087-435239:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:434443-434545:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:432774-432826:-1:exon

THYN1
type: Gene
subclass of: SO_0000704
RO_0002162: 419612
gene: THYN1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 449921..454135
location: region:449921-454135:1
so has part: feature:449921-454135:1:exon
subclass of: SO_0000010

102518604
type: Gene
SIO_000068: ncbigene

position:449921:1
position: 449921
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:454135:1
position: 454135
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:449921-454135:1:exon

THYN1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 419612
gene: THYN1
product: thymocyte nuclear protein 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 47 samples with support for all annotated introns
transcript id: XM_006182579.3
SIO_010081: THYN1
subclass of: SO_0000673
so part of: THYN1
location: join(449921..450149,451494..451675,452421..452489,452799..452891,453310..453405,453640..453790,453979..454135)
location: region:449921-454135:1
so has part: feature:449921-450149:1:exon
so has part: feature:451494-451675:1:exon
so has part: feature:452421-452489:1:exon
so has part: feature:452799-452891:1:exon
so has part: feature:453310-453405:1:exon
so has part: feature:453640-453790:1:exon
so has part: feature:453979-454135:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:449921-450149:1:exon

position:450149:1
position: 450149
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:451494-451675:1:exon

position:451494:1
position: 451494
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:451675:1
position: 451675
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:452421-452489:1:exon

position:452421:1
position: 452421
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:452489:1
position: 452489
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:452799-452891:1:exon

position:452799:1
position: 452799
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:452891:1
position: 452891
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:453310-453405:1:exon

position:453310:1
position: 453310
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:453405:1
position: 453405
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:453640-453790:1:exon

position:453640:1
position: 453640
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:453790:1
position: 453790
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:453979-454135:1:exon

position:453979:1
position: 453979
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

THYN1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 419612
gene: THYN1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: thymocyte nuclear protein 1
translation: MPRPRKRLAGAAGPDKKGPEGKRAKTEAPGEALAKVENSSLQKTSASKDCGENLSRYWLMKSEPESRLEKGVDVKFSIEDLKAQPEQTACWDGVRNYQARNFLRAMKLEEAAFFYHSNCREPGIAGLMKIVKEAYPDHTQFEKNSPHYDPSSKEDNPKWSMVDVQFVRMMKRFIPLAELRTHHQAHRATGGPLKNMALFTRQRLSVQPLTREEFDFILSLEEEEPT
SIO_010081: THYN1
subclass of: SO_0000673
so part of: THYN1
location: join(450107..450149,451494..451675,452421..452489,452799..452891,453310..453405,453640..453790,453979..454025)
location: region:450107-454025:1
so has part: feature:450107-450149:1:exon
so has part: feature:451494-451675:1:exon
so has part: feature:452421-452489:1:exon
so has part: feature:452799-452891:1:exon
so has part: feature:453310-453405:1:exon
so has part: feature:453640-453790:1:exon
so has part: feature:453979-454025:1:exon

XP_006182641.1
type: Protein
SIO_000068: ncbiprotein

position:450107:1
position: 450107
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:454025:1
position: 454025
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:450107-450149:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:451494-451675:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:452421-452489:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:452799-452891:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:453310-453405:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:453640-453790:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:453979-454025:1:exon

VPS26B
type: Gene
subclass of: SO_0000704
RO_0002162: 419612
gene: VPS26B
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(454528..472922)
location: region:454528-472922:-1
so has part: feature:454528-472922:-1:exon
subclass of: SO_0000010

102520028
type: Gene
SIO_000068: ncbigene

position:454528:-1
position: 454528
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:472922:-1
position: 472922
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:454528-472922:-1:exon

VPS26B
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 419612
gene: VPS26B
product: VPS26, retromer complex component B
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 18 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 43 samples with support for all annotated introns
transcript id: XM_032472456.1
SIO_010081: VPS26B
subclass of: SO_0000673
so part of: VPS26B
location: complement(join(454528..456552,456904..457046,458468..458643,460735..460899,464839..464995,472498..472922))
location: region:454528-472922:-1
so has part: feature:472498-472922:-1:exon
so has part: feature:464839-464995:-1:exon
so has part: feature:460735-460899:-1:exon
so has part: feature:458468-458643:-1:exon
so has part: feature:456904-457046:-1:exon
so has part: feature:454528-456552:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:472498-472922:-1:exon

position:472498:-1
position: 472498
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:464839-464995:-1:exon

position:464839:-1
position: 464839
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:464995:-1
position: 464995
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:460735-460899:-1:exon

position:460735:-1
position: 460735
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:460899:-1
position: 460899
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:458468-458643:-1:exon

position:458468:-1
position: 458468
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:458643:-1
position: 458643
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:456904-457046:-1:exon

position:456904:-1
position: 456904
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:457046:-1
position: 457046
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:454528-456552:-1:exon

position:456552:-1
position: 456552
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

VPS26B
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 419612
gene: VPS26B
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: vacuolar protein sorting-associated protein 26B
translation: MSFFGFGQSVEVDILLNDADSRKRAEHKTEDGKKDKYFLFYDGETVSGKVSLALKNPNKRLEHQGIKVEFIGQIELYYDRGNHHEFVSLVKDLARPGEITQSQAFDFEFTHVEKPYESYTGQNVKLRYFLRATISRRLNDVVKETDIVVHTLSTYPELNSSIKMEVGIEDCLHIEFEYNKSKYHLKDVIVGKIYFLLVRIKIKHMEIDIIKRETTGTGPNVYHENDTIAKYEIMDGAPVRGESIPIRLFLAGYELTPTMRDINKKFSVRYYLNLVLIDEEERRYFKQQEVVLWRKGDIVRKSMSHQAAIASQRFEGTTSLGEVRTPGQLSDGNSRQ
SIO_010081: VPS26B
subclass of: SO_0000673
so part of: VPS26B
location: complement(join(456406..456552,456904..457046,458468..458643,460735..460899,464839..464995,472498..472720))
location: region:456406-472720:-1
so has part: feature:472498-472720:-1:exon
so has part: feature:464839-464995:-1:exon
so has part: feature:460735-460899:-1:exon
so has part: feature:458468-458643:-1:exon
so has part: feature:456904-457046:-1:exon
so has part: feature:456406-456552:-1:exon

XP_032328347.1
type: Protein
SIO_000068: ncbiprotein

position:456406:-1
position: 456406
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:472720:-1
position: 472720
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:472498-472720:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:464839-464995:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:460735-460899:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:458468-458643:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:456904-457046:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:456406-456552:-1:exon

NCAPD3
type: Gene
subclass of: SO_0000704
RO_0002162: 419612
gene: NCAPD3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 473558..540798
location: region:473558-540798:1
so has part: feature:473558-540798:1:exon
subclass of: SO_0000010

102519797
type: Gene
SIO_000068: ncbigene

position:473558:1
position: 473558
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:540798:1
position: 540798
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:473558-540798:1:exon

NCAPD3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 419612
gene: NCAPD3
product: non-SMC condensin II complex subunit D3, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_032472453.1
SIO_010081: NCAPD3
subclass of: SO_0000673
so part of: NCAPD3
location: join(473558..473682,476271..476425,479320..479482,483699..483883,484489..484656,484761..484822,485007..485094,486736..486869,488076..488148,488916..489041,489170..489422,489827..489883,490113..490202,495292..495365,495870..496004,496761..496981,502273..502464,502762..502859,502953..503068,506096..506203,508191..508305,508408..508515,511829..512067,512759..512838,515813..515950,516087..516220,516332..516531,518742..518852,520366..520539,520890..521005,521112..521251,521930..522007,524141..524215,524297..524357,539855..540798)
location: region:473558-540798:1
so has part: feature:473558-473682:1:exon
so has part: feature:476271-476425:1:exon
so has part: feature:479320-479482:1:exon
so has part: feature:483699-483883:1:exon
so has part: feature:484489-484656:1:exon
so has part: feature:484761-484822:1:exon
so has part: feature:485007-485094:1:exon
so has part: feature:486736-486869:1:exon
so has part: feature:488076-488148:1:exon
so has part: feature:488916-489041:1:exon
so has part: feature:489170-489422:1:exon
so has part: feature:489827-489883:1:exon
so has part: feature:490113-490202:1:exon
so has part: feature:495292-495365:1:exon
so has part: feature:495870-496004:1:exon
so has part: feature:496761-496981:1:exon
so has part: feature:502273-502464:1:exon
so has part: feature:502762-502859:1:exon
so has part: feature:502953-503068:1:exon
so has part: feature:506096-506203:1:exon
so has part: feature:508191-508305:1:exon
so has part: feature:508408-508515:1:exon
so has part: feature:511829-512067:1:exon
so has part: feature:512759-512838:1:exon
so has part: feature:515813-515950:1:exon
so has part: feature:516087-516220:1:exon
so has part: feature:516332-516531:1:exon
so has part: feature:518742-518852:1:exon
so has part: feature:520366-520539:1:exon
so has part: feature:520890-521005:1:exon
so has part: feature:521112-521251:1:exon
so has part: feature:521930-522007:1:exon
so has part: feature:524141-524215:1:exon
so has part: feature:524297-524357:1:exon
so has part: feature:539855-540798:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:473558-473682:1:exon

position:473682:1
position: 473682
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:476271-476425:1:exon

position:476271:1
position: 476271
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:476425:1
position: 476425
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:479320-479482:1:exon

position:479320:1
position: 479320
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:479482:1
position: 479482
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:483699-483883:1:exon

position:483699:1
position: 483699
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:483883:1
position: 483883
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:484489-484656:1:exon

position:484489:1
position: 484489
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:484656:1
position: 484656
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:484761-484822:1:exon

position:484761:1
position: 484761
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:484822:1
position: 484822
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:485007-485094:1:exon

position:485007:1
position: 485007
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:485094:1
position: 485094
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:486736-486869:1:exon

position:486736:1
position: 486736
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:486869:1
position: 486869
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:488076-488148:1:exon

position:488076:1
position: 488076
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:488148:1
position: 488148
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:488916-489041:1:exon

position:488916:1
position: 488916
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:489041:1
position: 489041
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:489170-489422:1:exon

position:489170:1
position: 489170
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:489422:1
position: 489422
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:489827-489883:1:exon

position:489827:1
position: 489827
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:489883:1
position: 489883
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:490113-490202:1:exon

position:490113:1
position: 490113
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:490202:1
position: 490202
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:495292-495365:1:exon

position:495292:1
position: 495292
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:495365:1
position: 495365
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:495870-496004:1:exon

position:495870:1
position: 495870
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:496004:1
position: 496004
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:496761-496981:1:exon

position:496761:1
position: 496761
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:496981:1
position: 496981
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:502273-502464:1:exon

position:502273:1
position: 502273
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:502464:1
position: 502464
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:502762-502859:1:exon

position:502762:1
position: 502762
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:502859:1
position: 502859
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:502953-503068:1:exon

position:502953:1
position: 502953
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:503068:1
position: 503068
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:506096-506203:1:exon

position:506096:1
position: 506096
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:506203:1
position: 506203
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:508191-508305:1:exon

position:508191:1
position: 508191
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:508305:1
position: 508305
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:508408-508515:1:exon

position:508408:1
position: 508408
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:508515:1
position: 508515
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:511829-512067:1:exon

position:511829:1
position: 511829
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:512067:1
position: 512067
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:512759-512838:1:exon

position:512759:1
position: 512759
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:512838:1
position: 512838
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:515813-515950:1:exon

position:515813:1
position: 515813
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:515950:1
position: 515950
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 26
SIO_000628: feature:516087-516220:1:exon

position:516087:1
position: 516087
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:516220:1
position: 516220
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 27
SIO_000628: feature:516332-516531:1:exon

position:516332:1
position: 516332
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:516531:1
position: 516531
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 28
SIO_000628: feature:518742-518852:1:exon

position:518742:1
position: 518742
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:518852:1
position: 518852
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 29
SIO_000628: feature:520366-520539:1:exon

position:520366:1
position: 520366
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:520539:1
position: 520539
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 30
SIO_000628: feature:520890-521005:1:exon

position:520890:1
position: 520890
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:521005:1
position: 521005
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 31
SIO_000628: feature:521112-521251:1:exon

position:521112:1
position: 521112
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:521251:1
position: 521251
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 32
SIO_000628: feature:521930-522007:1:exon

position:521930:1
position: 521930
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:522007:1
position: 522007
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 33
SIO_000628: feature:524141-524215:1:exon

position:524141:1
position: 524141
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:524215:1
position: 524215
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 34
SIO_000628: feature:524297-524357:1:exon

position:524297:1
position: 524297
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:524357:1
position: 524357
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 35
SIO_000628: feature:539855-540798:1:exon

position:539855:1
position: 539855
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

NCAPD3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 419612
gene: NCAPD3
product: non-SMC condensin II complex subunit D3, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments, including 28 samples with support for all annotated introns
transcript id: XM_032472452.1
SIO_010081: NCAPD3
subclass of: SO_0000673
so part of: NCAPD3
location: join(473558..473682,476271..476425,479320..479482,483699..483883,484489..484656,484761..484822,485007..485094,486736..486869,488076..488148,488916..489041,489170..489422,489827..489883,490113..490202,495292..495365,495870..496004,496761..496981,502273..502464,502762..502859,502953..503068,506096..506203,508191..508305,508408..508515,511829..512067,512759..512838,515813..515950,516087..516220,516332..516531,518742..518852,520366..520539,520890..521005,521112..521251,521930..522007,524141..524357,524438..524965)
location: region:473558-524965:1
so has part: feature:473558-473682:1:exon
so has part: feature:476271-476425:1:exon
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so has part: feature:483699-483883:1:exon
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so has part: feature:488916-489041:1:exon
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so has part: feature:495292-495365:1:exon
so has part: feature:495870-496004:1:exon
so has part: feature:496761-496981:1:exon
so has part: feature:502273-502464:1:exon
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so has part: feature:511829-512067:1:exon
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so has part: feature:524141-524357:1:exon
so has part: feature:524438-524965:1:exon

position:524965:1
position: 524965
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:473558-473682:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:476271-476425:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:479320-479482:1:exon

urn:…
SIO_000300: 4
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urn:…
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urn:…
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urn:…
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urn:…
SIO_000300: 15
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urn:…
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urn:…
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urn:…
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urn:…
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urn:…
SIO_000300: 22
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urn:…
SIO_000300: 23
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urn:…
SIO_000300: 24
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urn:…
SIO_000300: 25
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urn:…
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urn:…
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urn:…
SIO_000300: 30
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urn:…
SIO_000300: 31
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urn:…
SIO_000300: 32
SIO_000628: feature:521930-522007:1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:524141-524357:1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:524438-524965:1:exon

position:524438:1
position: 524438
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

NCAPD3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 419612
gene: NCAPD3
product: non-SMC condensin II complex subunit D3, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 28 samples with support for all annotated introns
transcript id: XM_032472454.1
SIO_010081: NCAPD3
subclass of: SO_0000673
so part of: NCAPD3
location: join(473558..473682,476271..476425,479320..479482,483699..483883,484489..484656,484761..484822,485007..485094,486736..486869,488076..488148,488916..489041,489170..489422,489827..489883,490113..490202,495292..495365,495870..496004,496761..496981,502273..502464,502762..502859,502953..503068,506096..506203,508191..508305,508408..508515,511829..512067,512759..512838,515813..515950,516087..516220,516332..516531,518742..518852,520366..520539,520890..521005,521112..521251,521930..522007,524141..524215,524297..524357,524438..524965)
location: region:473558-524965:1
so has part: feature:473558-473682:1:exon
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so has part: feature:484761-484822:1:exon
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so has part: feature:524297-524357:1:exon
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urn:…
SIO_000300: 1
SIO_000628: feature:473558-473682:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:476271-476425:1:exon

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urn:…
SIO_000300: 10
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urn:…
SIO_000300: 12
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urn:…
SIO_000300: 14
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urn:…
SIO_000300: 17
SIO_000628: feature:502273-502464:1:exon

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SIO_000300: 21
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urn:…
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urn:…
SIO_000300: 31
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urn:…
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urn:…
SIO_000300: 34
SIO_000628: feature:524297-524357:1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:524438-524965:1:exon

NCAPD3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 419612
gene: NCAPD3
product: non-SMC condensin II complex subunit D3, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 19 samples with support for all annotated introns
transcript id: XM_032472455.1
SIO_010081: NCAPD3
subclass of: SO_0000673
so part of: NCAPD3
location: join(473558..473682,476271..476425,479320..479482,483699..483883,484489..484656,484761..484822,485007..485094,486736..486869,488076..488148,488916..489041,489170..489422,489827..489883,490113..490202,495292..495365,495870..496004,496761..496981,502273..502464,502762..502859,502953..503068,506096..506203,508191..508305,508408..508515,511829..512067,512759..512838,515813..515950,516087..516220,516332..516531,518742..518852,520366..520539,521112..521251,521930..522007,524141..524215)
location: region:473558-524215:1
so has part: feature:473558-473682:1:exon
so has part: feature:476271-476425:1:exon
so has part: feature:479320-479482:1:exon
so has part: feature:483699-483883:1:exon
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so has part: feature:521112-521251:1:exon
so has part: feature:521930-522007:1:exon
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urn:…
SIO_000300: 1
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urn:…
SIO_000300: 2
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urn:…
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urn:…
SIO_000300: 4
SIO_000628: feature:483699-483883:1:exon

urn:…
SIO_000300: 5
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urn:…
SIO_000300: 9
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urn:…
SIO_000300: 10
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urn:…
SIO_000300: 11
SIO_000628: feature:489170-489422:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:489827-489883:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:490113-490202:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:495292-495365:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:495870-496004:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:496761-496981:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:502273-502464:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:502762-502859:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:502953-503068:1:exon

urn:…
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SIO_000628: feature:506096-506203:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:508191-508305:1:exon

urn:…
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urn:…
SIO_000300: 23
SIO_000628: feature:511829-512067:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:512759-512838:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:515813-515950:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:516087-516220:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:516332-516531:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:518742-518852:1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:520366-520539:1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:521112-521251:1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:521930-522007:1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:524141-524215:1:exon

NCAPD3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 419612
gene: NCAPD3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: condensin-2 complex subunit D3 isoform X2
translation: MARPNLGSGLQPWSPLDLSREWVDAVWELEFTETEPLDPSIEAEIVENGLSAFTKLYDSLFPFAIEEHGSTESVWTFFIENNISHGALVALFHHFVQVVHKKSVSVQHREFGLHAAGLYFLLLEVPGSVANQVFHPVMFDKCIQILKRSWPQESSSSQKRKKEQPKNSQANPRGSRKRGKLPRKEDMEMDEIIEEQEDEENIYFSARDLCQIRNAIFHVLKNFLRLLPKFSLKEKPQCIQNCVEVFVALTNFEPVLHEFHVTQARNLDEAKYIPELAYHGLYLLCSPIHGEGDKVISCVFHQMLNIILMLEVGEGSHRTPLAITSPVISSRNQAVRFISSLVDELKESVFPVLHILLQHICAKVIDKSEYRTHAAQSLVQLLSKLPCGEYAAFIAWLYRYSRSSKIPHRVFTLDVALALLELPEREVDSTLRPEQHRFLKHKFLVQDIMFARCLDKAPTVRSKALSSFAHCLEFSVPSASESVLELLVNSSTISGIESHHNTLPKHSSAFSSQRQTLSPPGGSEVTHTDSSGGPAGSRESCVMAMLRKRAQDEKANVRRSALQVLVSILKHCDVSGMKEELSILQDRCRDPTVSVRKQALQSLTELLTAQPHCIQIQKAWLVGAVPVVMDCESTVQDKALECLDQLLLQNIRHHSQFHPGDDSQVLAWALLALLSTESREMSRYLNKAFHIWAKKDKFSSAFVNNVLSHAGTEHSAPAWMLLAKVAGSAPALDYTRIIKSWEKISSQQSPSADTLGHILCVIGHIAKHLPQSTRDKVTDVVKGKLNGFQWSLELISSAVDTLQSLCRASAETPLEEQELLVQVCGDVLSSCVCCLSNVVLKEDGAGRMDEDLVVKYIFTLGDIAQLCPASVDKRAFLLIQSILAASASSDCLTPGPGSSEAPASQPLSQVQGSVMPSVIRAHAVITLGKLCLQHEDLAKKSVPALVRELEVCEDAAVRSNVVIVLCDLCIRYTVMVDKYIPNISMCLKDPDAFVRKQTLLLLTNLLQEDFVKWKGSLFFRFVSTLTDPHPDIASLGEFCLAHLLLKRSPTTFFQHFIECIFHFSSYEKHEKYNRFPQSEREKQLFSLKGKTNKEKRMKIYRFLLEHFTDEQRFNMTSKLCLGILACFADGTLPLDMEANELLSDTFEVLSSKEIKLLAMRSKPDKDLLSEEDDLALANAVMQEAQKKLISQVQKRNFIENIIPIIISLKTVLEKNKMPALRELMNYLREVMQDYRDEVKDFFALDKQLASELEYDMKRHREQLAQEQEQALARRPSMGAQGAQAVQVVPSLEIGPAGAGKDGASLAPGSPPPAPGPPERLMHRARPVSLSTIAVLNSVRRAVELSGQPRSRSAGLLPSSVRPRSPGEPSNQASSQGLEQESSGAIDRVTNRAISTPERTIQNVTFGAGLSYIGSPRTPCPAREKMDAQSHGDDILCLSLPDKPSQETSRPGPPVSGRRKEGTNTSPPEADRNQEMFDFPPCPFSMKQA
SIO_010081: NCAPD3
subclass of: SO_0000673
so part of: NCAPD3
location: join(473622..473682,476271..476425,479320..479482,483699..483883,484489..484656,484761..484822,485007..485094,486736..486869,488076..488148,488916..489041,489170..489422,489827..489883,490113..490202,495292..495365,495870..496004,496761..496981,502273..502464,502762..502859,502953..503068,506096..506203,508191..508305,508408..508515,511829..512067,512759..512838,515813..515950,516087..516220,516332..516531,518742..518852,520366..520539,520890..521005,521112..521251,521930..522007,524141..524215,524297..524357,539855..539993)
location: region:473622-539993:1
so has part: feature:473622-473682:1:exon
so has part: feature:476271-476425:1:exon
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so has part: feature:484761-484822:1:exon
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so has part: feature:488076-488148:1:exon
so has part: feature:488916-489041:1:exon
so has part: feature:489170-489422:1:exon
so has part: feature:489827-489883:1:exon
so has part: feature:490113-490202:1:exon
so has part: feature:495292-495365:1:exon
so has part: feature:495870-496004:1:exon
so has part: feature:496761-496981:1:exon
so has part: feature:502273-502464:1:exon
so has part: feature:502762-502859:1:exon
so has part: feature:502953-503068:1:exon
so has part: feature:506096-506203:1:exon
so has part: feature:508191-508305:1:exon
so has part: feature:508408-508515:1:exon
so has part: feature:511829-512067:1:exon
so has part: feature:512759-512838:1:exon
so has part: feature:515813-515950:1:exon
so has part: feature:516087-516220:1:exon
so has part: feature:516332-516531:1:exon
so has part: feature:518742-518852:1:exon
so has part: feature:520366-520539:1:exon
so has part: feature:520890-521005:1:exon
so has part: feature:521112-521251:1:exon
so has part: feature:521930-522007:1:exon
so has part: feature:524141-524215:1:exon
so has part: feature:524297-524357:1:exon
so has part: feature:539855-539993:1:exon

XP_032328344.1
type: Protein
SIO_000068: ncbiprotein

position:473622:1
position: 473622
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:539993:1
position: 539993
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:473622-473682:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:476271-476425:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:479320-479482:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:483699-483883:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:484489-484656:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:484761-484822:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:485007-485094:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:486736-486869:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:488076-488148:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:488916-489041:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:489170-489422:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:489827-489883:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:490113-490202:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:495292-495365:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:495870-496004:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:496761-496981:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:502273-502464:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:502762-502859:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:502953-503068:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:506096-506203:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:508191-508305:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:508408-508515:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:511829-512067:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:512759-512838:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:515813-515950:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:516087-516220:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:516332-516531:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:518742-518852:1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:520366-520539:1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:520890-521005:1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:521112-521251:1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:521930-522007:1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:524141-524215:1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:524297-524357:1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:539855-539993:1:exon

NCAPD3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 419612
gene: NCAPD3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: condensin-2 complex subunit D3 isoform X1
translation: MARPNLGSGLQPWSPLDLSREWVDAVWELEFTETEPLDPSIEAEIVENGLSAFTKLYDSLFPFAIEEHGSTESVWTFFIENNISHGALVALFHHFVQVVHKKSVSVQHREFGLHAAGLYFLLLEVPGSVANQVFHPVMFDKCIQILKRSWPQESSSSQKRKKEQPKNSQANPRGSRKRGKLPRKEDMEMDEIIEEQEDEENIYFSARDLCQIRNAIFHVLKNFLRLLPKFSLKEKPQCIQNCVEVFVALTNFEPVLHEFHVTQARNLDEAKYIPELAYHGLYLLCSPIHGEGDKVISCVFHQMLNIILMLEVGEGSHRTPLAITSPVISSRNQAVRFISSLVDELKESVFPVLHILLQHICAKVIDKSEYRTHAAQSLVQLLSKLPCGEYAAFIAWLYRYSRSSKIPHRVFTLDVALALLELPEREVDSTLRPEQHRFLKHKFLVQDIMFARCLDKAPTVRSKALSSFAHCLEFSVPSASESVLELLVNSSTISGIESHHNTLPKHSSAFSSQRQTLSPPGGSEVTHTDSSGGPAGSRESCVMAMLRKRAQDEKANVRRSALQVLVSILKHCDVSGMKEELSILQDRCRDPTVSVRKQALQSLTELLTAQPHCIQIQKAWLVGAVPVVMDCESTVQDKALECLDQLLLQNIRHHSQFHPGDDSQVLAWALLALLSTESREMSRYLNKAFHIWAKKDKFSSAFVNNVLSHAGTEHSAPAWMLLAKVAGSAPALDYTRIIKSWEKISSQQSPSADTLGHILCVIGHIAKHLPQSTRDKVTDVVKGKLNGFQWSLELISSAVDTLQSLCRASAETPLEEQELLVQVCGDVLSSCVCCLSNVVLKEDGAGRMDEDLVVKYIFTLGDIAQLCPASVDKRAFLLIQSILAASASSDCLTPGPGSSEAPASQPLSQVQGSVMPSVIRAHAVITLGKLCLQHEDLAKKSVPALVRELEVCEDAAVRSNVVIVLCDLCIRYTVMVDKYIPNISMCLKDPDAFVRKQTLLLLTNLLQEDFVKWKGSLFFRFVSTLTDPHPDIASLGEFCLAHLLLKRSPTTFFQHFIECIFHFSSYEKHEKYNRFPQSEREKQLFSLKGKTNKEKRMKIYRFLLEHFTDEQRFNMTSKLCLGILACFADGTLPLDMEANELLSDTFEVLSSKEIKLLAMRSKPDKDLLSEEDDLALANAVMQEAQKKLISQVQKRNFIENIIPIIISLKTVLEKNKMPALRELMNYLREVMQDYRDEVKDFFALDKQLASELEYDMKRHREQLAQEQEQALARRPSMGAQGAQAVQVVPSLEIGPAGAGKDGASLAPGSPPPAPGPPERLMHRARPVSLSTIAVLNSVRRAVELSGQPRSRSAGLLPSSVRPRSPGEPSNQASSQGLEQESSGAIDRVTNRAISTPERTIQNVTFGAGLSYIGSPRTPCPARGKSPPVRHTSCSPIVLPGSLSLSDSLSEKMDAQSHGDDILCLSLPDKPPPQPPQWNVTSPARGRDSTAPSRRSLRKTPLQTAN
SIO_010081: NCAPD3
subclass of: SO_0000673
so part of: NCAPD3
location: join(473622..473682,476271..476425,479320..479482,483699..483883,484489..484656,484761..484822,485007..485094,486736..486869,488076..488148,488916..489041,489170..489422,489827..489883,490113..490202,495292..495365,495870..496004,496761..496981,502273..502464,502762..502859,502953..503068,506096..506203,508191..508305,508408..508515,511829..512067,512759..512838,515813..515950,516087..516220,516332..516531,518742..518852,520366..520539,520890..521005,521112..521251,521930..522007,524141..524357,524438..524546)
location: region:473622-524546:1
so has part: feature:473622-473682:1:exon
so has part: feature:476271-476425:1:exon
so has part: feature:479320-479482:1:exon
so has part: feature:483699-483883:1:exon
so has part: feature:484489-484656:1:exon
so has part: feature:484761-484822:1:exon
so has part: feature:485007-485094:1:exon
so has part: feature:486736-486869:1:exon
so has part: feature:488076-488148:1:exon
so has part: feature:488916-489041:1:exon
so has part: feature:489170-489422:1:exon
so has part: feature:489827-489883:1:exon
so has part: feature:490113-490202:1:exon
so has part: feature:495292-495365:1:exon
so has part: feature:495870-496004:1:exon
so has part: feature:496761-496981:1:exon
so has part: feature:502273-502464:1:exon
so has part: feature:502762-502859:1:exon
so has part: feature:502953-503068:1:exon
so has part: feature:506096-506203:1:exon
so has part: feature:508191-508305:1:exon
so has part: feature:508408-508515:1:exon
so has part: feature:511829-512067:1:exon
so has part: feature:512759-512838:1:exon
so has part: feature:515813-515950:1:exon
so has part: feature:516087-516220:1:exon
so has part: feature:516332-516531:1:exon
so has part: feature:518742-518852:1:exon
so has part: feature:520366-520539:1:exon
so has part: feature:520890-521005:1:exon
so has part: feature:521112-521251:1:exon
so has part: feature:521930-522007:1:exon
so has part: feature:524141-524357:1:exon
so has part: feature:524438-524546:1:exon

XP_032328343.1
type: Protein
SIO_000068: ncbiprotein

position:524546:1
position: 524546
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:473622-473682:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:476271-476425:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:479320-479482:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:483699-483883:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:484489-484656:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:484761-484822:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:485007-485094:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:486736-486869:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:488076-488148:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:488916-489041:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:489170-489422:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:489827-489883:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:490113-490202:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:495292-495365:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:495870-496004:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:496761-496981:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:502273-502464:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:502762-502859:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:502953-503068:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:506096-506203:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:508191-508305:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:508408-508515:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:511829-512067:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:512759-512838:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:515813-515950:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:516087-516220:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:516332-516531:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:518742-518852:1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:520366-520539:1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:520890-521005:1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:521112-521251:1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:521930-522007:1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:524141-524357:1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:524438-524546:1:exon

NCAPD3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 419612
gene: NCAPD3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: condensin-2 complex subunit D3 isoform X3
translation: MARPNLGSGLQPWSPLDLSREWVDAVWELEFTETEPLDPSIEAEIVENGLSAFTKLYDSLFPFAIEEHGSTESVWTFFIENNISHGALVALFHHFVQVVHKKSVSVQHREFGLHAAGLYFLLLEVPGSVANQVFHPVMFDKCIQILKRSWPQESSSSQKRKKEQPKNSQANPRGSRKRGKLPRKEDMEMDEIIEEQEDEENIYFSARDLCQIRNAIFHVLKNFLRLLPKFSLKEKPQCIQNCVEVFVALTNFEPVLHEFHVTQARNLDEAKYIPELAYHGLYLLCSPIHGEGDKVISCVFHQMLNIILMLEVGEGSHRTPLAITSPVISSRNQAVRFISSLVDELKESVFPVLHILLQHICAKVIDKSEYRTHAAQSLVQLLSKLPCGEYAAFIAWLYRYSRSSKIPHRVFTLDVALALLELPEREVDSTLRPEQHRFLKHKFLVQDIMFARCLDKAPTVRSKALSSFAHCLEFSVPSASESVLELLVNSSTISGIESHHNTLPKHSSAFSSQRQTLSPPGGSEVTHTDSSGGPAGSRESCVMAMLRKRAQDEKANVRRSALQVLVSILKHCDVSGMKEELSILQDRCRDPTVSVRKQALQSLTELLTAQPHCIQIQKAWLVGAVPVVMDCESTVQDKALECLDQLLLQNIRHHSQFHPGDDSQVLAWALLALLSTESREMSRYLNKAFHIWAKKDKFSSAFVNNVLSHAGTEHSAPAWMLLAKVAGSAPALDYTRIIKSWEKISSQQSPSADTLGHILCVIGHIAKHLPQSTRDKVTDVVKGKLNGFQWSLELISSAVDTLQSLCRASAETPLEEQELLVQVCGDVLSSCVCCLSNVVLKEDGAGRMDEDLVVKYIFTLGDIAQLCPASVDKRAFLLIQSILAASASSDCLTPGPGSSEAPASQPLSQVQGSVMPSVIRAHAVITLGKLCLQHEDLAKKSVPALVRELEVCEDAAVRSNVVIVLCDLCIRYTVMVDKYIPNISMCLKDPDAFVRKQTLLLLTNLLQEDFVKWKGSLFFRFVSTLTDPHPDIASLGEFCLAHLLLKRSPTTFFQHFIECIFHFSSYEKHEKYNRFPQSEREKQLFSLKGKTNKEKRMKIYRFLLEHFTDEQRFNMTSKLCLGILACFADGTLPLDMEANELLSDTFEVLSSKEIKLLAMRSKPDKDLLSEEDDLALANAVMQEAQKKLISQVQKRNFIENIIPIIISLKTVLEKNKMPALRELMNYLREVMQDYRDEVKDFFALDKQLASELEYDMKRHREQLAQEQEQALARRPSMGAQGAQAVQVVPSLEIGPAGAGKDGASLAPGSPPPAPGPPERLMHRARPVSLSTIAVLNSVRRAVELSGQPRSRSAGLLPSSVRPRSPGEPSNQASSQGLEQESSGAIDRVTNRAISTPERTIQNVTFGAGLSYIGSPRTPCPAREKMDAQSHGDDILCLSLPDKPPPQPPQWNVTSPARGRDSTAPSRRSLRKTPLQTAN
SIO_010081: NCAPD3
subclass of: SO_0000673
so part of: NCAPD3
location: join(473622..473682,476271..476425,479320..479482,483699..483883,484489..484656,484761..484822,485007..485094,486736..486869,488076..488148,488916..489041,489170..489422,489827..489883,490113..490202,495292..495365,495870..496004,496761..496981,502273..502464,502762..502859,502953..503068,506096..506203,508191..508305,508408..508515,511829..512067,512759..512838,515813..515950,516087..516220,516332..516531,518742..518852,520366..520539,520890..521005,521112..521251,521930..522007,524141..524215,524297..524357,524438..524546)
location: region:473622-524546:1
so has part: feature:473622-473682:1:exon
so has part: feature:476271-476425:1:exon
so has part: feature:479320-479482:1:exon
so has part: feature:483699-483883:1:exon
so has part: feature:484489-484656:1:exon
so has part: feature:484761-484822:1:exon
so has part: feature:485007-485094:1:exon
so has part: feature:486736-486869:1:exon
so has part: feature:488076-488148:1:exon
so has part: feature:488916-489041:1:exon
so has part: feature:489170-489422:1:exon
so has part: feature:489827-489883:1:exon
so has part: feature:490113-490202:1:exon
so has part: feature:495292-495365:1:exon
so has part: feature:495870-496004:1:exon
so has part: feature:496761-496981:1:exon
so has part: feature:502273-502464:1:exon
so has part: feature:502762-502859:1:exon
so has part: feature:502953-503068:1:exon
so has part: feature:506096-506203:1:exon
so has part: feature:508191-508305:1:exon
so has part: feature:508408-508515:1:exon
so has part: feature:511829-512067:1:exon
so has part: feature:512759-512838:1:exon
so has part: feature:515813-515950:1:exon
so has part: feature:516087-516220:1:exon
so has part: feature:516332-516531:1:exon
so has part: feature:518742-518852:1:exon
so has part: feature:520366-520539:1:exon
so has part: feature:520890-521005:1:exon
so has part: feature:521112-521251:1:exon
so has part: feature:521930-522007:1:exon
so has part: feature:524141-524215:1:exon
so has part: feature:524297-524357:1:exon
so has part: feature:524438-524546:1:exon

XP_032328345.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:473622-473682:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:476271-476425:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:479320-479482:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:483699-483883:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:484489-484656:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:484761-484822:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:485007-485094:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:486736-486869:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:488076-488148:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:488916-489041:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:489170-489422:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:489827-489883:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:490113-490202:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:495292-495365:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:495870-496004:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:496761-496981:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:502273-502464:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:502762-502859:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:502953-503068:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:506096-506203:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:508191-508305:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:508408-508515:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:511829-512067:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:512759-512838:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:515813-515950:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:516087-516220:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:516332-516531:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:518742-518852:1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:520366-520539:1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:520890-521005:1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:521112-521251:1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:521930-522007:1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:524141-524215:1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:524297-524357:1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:524438-524546:1:exon

NCAPD3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 419612
gene: NCAPD3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: condensin-2 complex subunit D3 isoform X4
translation: MARPNLGSGLQPWSPLDLSREWVDAVWELEFTETEPLDPSIEAEIVENGLSAFTKLYDSLFPFAIEEHGSTESVWTFFIENNISHGALVALFHHFVQVVHKKSVSVQHREFGLHAAGLYFLLLEVPGSVANQVFHPVMFDKCIQILKRSWPQESSSSQKRKKEQPKNSQANPRGSRKRGKLPRKEDMEMDEIIEEQEDEENIYFSARDLCQIRNAIFHVLKNFLRLLPKFSLKEKPQCIQNCVEVFVALTNFEPVLHEFHVTQARNLDEAKYIPELAYHGLYLLCSPIHGEGDKVISCVFHQMLNIILMLEVGEGSHRTPLAITSPVISSRNQAVRFISSLVDELKESVFPVLHILLQHICAKVIDKSEYRTHAAQSLVQLLSKLPCGEYAAFIAWLYRYSRSSKIPHRVFTLDVALALLELPEREVDSTLRPEQHRFLKHKFLVQDIMFARCLDKAPTVRSKALSSFAHCLEFSVPSASESVLELLVNSSTISGIESHHNTLPKHSSAFSSQRQTLSPPGGSEVTHTDSSGGPAGSRESCVMAMLRKRAQDEKANVRRSALQVLVSILKHCDVSGMKEELSILQDRCRDPTVSVRKQALQSLTELLTAQPHCIQIQKAWLVGAVPVVMDCESTVQDKALECLDQLLLQNIRHHSQFHPGDDSQVLAWALLALLSTESREMSRYLNKAFHIWAKKDKFSSAFVNNVLSHAGTEHSAPAWMLLAKVAGSAPALDYTRIIKSWEKISSQQSPSADTLGHILCVIGHIAKHLPQSTRDKVTDVVKGKLNGFQWSLELISSAVDTLQSLCRASAETPLEEQELLVQVCGDVLSSCVCCLSNVVLKEDGAGRMDEDLVVKYIFTLGDIAQLCPASVDKRAFLLIQSILAASASSDCLTPGPGSSEAPASQPLSQVQGSVMPSVIRAHAVITLGKLCLQHEDLAKKSVPALVRELEVCEDAAVRSNVVIVLCDLCIRYTVMVDKYIPNISMCLKDPDAFVRKQTLLLLTNLLQEDFVKWKGSLFFRFVSTLTDPHPDIASLGEFCLAHLLLKRSPTTFFQHFIECIFHFSSYEKHEKYNRFPQSEREKQLFSLKGKTNKEKRMKIYRFLLEHFTDEQRFNMTSKLCLGILACFADGTLPLDMEANELLSDTFEVLSSKEIKLLAMRSKPDKDLLSEEDDLALANAVMQEAQKKLISQVQKRNFIENIIPIIISLKTVLEKNKMPALRELMNYLREVMQDYRDEVKDFFALDKQLASELEYDMKRHREQLAQEQEQALARRPSMGAQGAQAVQACVTEHHRRPQFRQEGRGVEWPASQPECRAAALLRASQEPRRAQQPSILPGPGARVQWSH
SIO_010081: NCAPD3
subclass of: SO_0000673
so part of: NCAPD3
location: join(473622..473682,476271..476425,479320..479482,483699..483883,484489..484656,484761..484822,485007..485094,486736..486869,488076..488148,488916..489041,489170..489422,489827..489883,490113..490202,495292..495365,495870..496004,496761..496981,502273..502464,502762..502859,502953..503068,506096..506203,508191..508305,508408..508515,511829..512067,512759..512838,515813..515950,516087..516220,516332..516531,518742..518852,520366..520539,521112..521251,521930..521972)
location: region:473622-521972:1
so has part: feature:473622-473682:1:exon
so has part: feature:476271-476425:1:exon
so has part: feature:479320-479482:1:exon
so has part: feature:483699-483883:1:exon
so has part: feature:484489-484656:1:exon
so has part: feature:484761-484822:1:exon
so has part: feature:485007-485094:1:exon
so has part: feature:486736-486869:1:exon
so has part: feature:488076-488148:1:exon
so has part: feature:488916-489041:1:exon
so has part: feature:489170-489422:1:exon
so has part: feature:489827-489883:1:exon
so has part: feature:490113-490202:1:exon
so has part: feature:495292-495365:1:exon
so has part: feature:495870-496004:1:exon
so has part: feature:496761-496981:1:exon
so has part: feature:502273-502464:1:exon
so has part: feature:502762-502859:1:exon
so has part: feature:502953-503068:1:exon
so has part: feature:506096-506203:1:exon
so has part: feature:508191-508305:1:exon
so has part: feature:508408-508515:1:exon
so has part: feature:511829-512067:1:exon
so has part: feature:512759-512838:1:exon
so has part: feature:515813-515950:1:exon
so has part: feature:516087-516220:1:exon
so has part: feature:516332-516531:1:exon
so has part: feature:518742-518852:1:exon
so has part: feature:520366-520539:1:exon
so has part: feature:521112-521251:1:exon
so has part: feature:521930-521972:1:exon

XP_032328346.1
type: Protein
SIO_000068: ncbiprotein

position:521972:1
position: 521972
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:473622-473682:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:476271-476425:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:479320-479482:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:483699-483883:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:484489-484656:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:484761-484822:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:485007-485094:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:486736-486869:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:488076-488148:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:488916-489041:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:489170-489422:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:489827-489883:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:490113-490202:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:495292-495365:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:495870-496004:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:496761-496981:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:502273-502464:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:502762-502859:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:502953-503068:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:506096-506203:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:508191-508305:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:508408-508515:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:511829-512067:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:512759-512838:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:515813-515950:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:516087-516220:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:516332-516531:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:518742-518852:1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:520366-520539:1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:521112-521251:1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:521930-521972:1:exon

JAM3
type: Gene
subclass of: SO_0000704
RO_0002162: 419612
gene: JAM3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(525543..564710)
location: region:525543-564710:-1
so has part: feature:525543-564710:-1:exon
subclass of: SO_0000010

102519562
type: Gene
SIO_000068: ncbigene

position:525543:-1
position: 525543
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:564710:-1
position: 564710
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:525543-564710:-1:exon

JAM3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 419612
gene: JAM3
product: junctional adhesion molecule 3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 45 samples with support for all annotated introns
transcript id: XM_032472457.1
SIO_010081: JAM3
subclass of: SO_0000673
so part of: JAM3
location: complement(join(525543..527675,527982..528036,528120..528246,529320..529419,529881..530083,530375..530527,533269..533382,533815..533880,564566..564710))
location: region:525543-564710:-1
so has part: feature:564566-564710:-1:exon
so has part: feature:533815-533880:-1:exon
so has part: feature:533269-533382:-1:exon
so has part: feature:530375-530527:-1:exon
so has part: feature:529881-530083:-1:exon
so has part: feature:529320-529419:-1:exon
so has part: feature:528120-528246:-1:exon
so has part: feature:527982-528036:-1:exon
so has part: feature:525543-527675:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:564566-564710:-1:exon

position:564566:-1
position: 564566
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:533815-533880:-1:exon

position:533815:-1
position: 533815
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:533880:-1
position: 533880
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:533269-533382:-1:exon

position:533269:-1
position: 533269
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:533382:-1
position: 533382
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:530375-530527:-1:exon

position:530375:-1
position: 530375
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:530527:-1
position: 530527
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:529881-530083:-1:exon

position:529881:-1
position: 529881
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:530083:-1
position: 530083
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:529320-529419:-1:exon

position:529320:-1
position: 529320
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:529419:-1
position: 529419
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:528120-528246:-1:exon

position:528120:-1
position: 528120
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:528246:-1
position: 528246
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:527982-528036:-1:exon

position:527982:-1
position: 527982
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:528036:-1
position: 528036
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:525543-527675:-1:exon

position:527675:-1
position: 527675
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

JAM3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 419612
gene: JAM3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: junctional adhesion molecule C
translation: MATGAGTGSRAGRMRGERARGPSAALDMALRRRPALALLLLLRGCLLGAVNLKSSNRNPVVQEFESVELSCIITDSQTSDPRIEWKKIQDAQTTYVYFDNKIQGDLAGRAELLGKTSLKIWNVTRTDSALYRCEVVARDDRKEIDEIVIELTVQVKPVSPVCRVPRAVPAGKAATLTCQEGEGSPRPRYSWYRDDVPLPTDSRANPRFRNSSFLFDAETGTLVFSAVHKEDSGRYYCIASNDAGSARCEEQEMEVYDLNIGGIIGGVLVVLAVLALITAGICCAYRRGYFINKQDGDSYKNPGRPDGVNYIRTDEEGDFRHKSSFVI
SIO_010081: JAM3
subclass of: SO_0000673
so part of: JAM3
location: complement(join(527640..527675,527982..528036,528120..528246,529320..529419,529881..530083,530375..530527,533269..533382,533815..533880,564566..564695))
location: region:527640-564695:-1
so has part: feature:564566-564695:-1:exon
so has part: feature:533815-533880:-1:exon
so has part: feature:533269-533382:-1:exon
so has part: feature:530375-530527:-1:exon
so has part: feature:529881-530083:-1:exon
so has part: feature:529320-529419:-1:exon
so has part: feature:528120-528246:-1:exon
so has part: feature:527982-528036:-1:exon
so has part: feature:527640-527675:-1:exon

XP_032328348.1
type: Protein
SIO_000068: ncbiprotein

position:527640:-1
position: 527640
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:564695:-1
position: 564695
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:564566-564695:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:533815-533880:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:533269-533382:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:530375-530527:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:529881-530083:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:529320-529419:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:528120-528246:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:527982-528036:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:527640-527675:-1:exon

LOC116661134
type: Gene
subclass of: SO_0000704
RO_0002162: 419612
gene: LOC116661134
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(575989..581010)
location: region:575989-581010:-1
so has part: feature:575989-581010:-1:exon
subclass of: SO_0000011

116661134
type: Gene
SIO_000068: ncbigene

position:575989:-1
position: 575989
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:581010:-1
position: 581010
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:575989-581010:-1:exon

LOC116661134
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 419612
nc RNA class: lncRNA
gene: LOC116661134
product: uncharacterized LOC116661134
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XR_004316890.1
SIO_010081: LOC116661134
subclass of: SO_0000673
so part of: LOC116661134
location: complement(join(575989..577316,578861..579068,579255..579360,579615..579773,580904..581010))
location: region:575989-581010:-1
so has part: feature:580904-581010:-1:exon
so has part: feature:579615-579773:-1:exon
so has part: feature:579255-579360:-1:exon
so has part: feature:578861-579068:-1:exon
so has part: feature:575989-577316:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:580904-581010:-1:exon

position:580904:-1
position: 580904
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:579615-579773:-1:exon

position:579615:-1
position: 579615
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:579773:-1
position: 579773
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:579255-579360:-1:exon

position:579255:-1
position: 579255
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:579360:-1
position: 579360
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:578861-579068:-1:exon

position:578861:-1
position: 578861
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:579068:-1
position: 579068
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:575989-577316:-1:exon

position:577316:-1
position: 577316
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC116661149
type: Gene
subclass of: SO_0000704
RO_0002162: 419612
gene: LOC116661149
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(599663..606454)
location: region:599663-606454:-1
so has part: feature:599663-606454:-1:exon
subclass of: SO_0000011

116661149
type: Gene
SIO_000068: ncbigene

position:599663:-1
position: 599663
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:606454:-1
position: 606454
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:599663-606454:-1:exon

LOC116661149
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 419612
nc RNA class: lncRNA
gene: LOC116661149
product: uncharacterized LOC116661149
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XR_004316919.1
SIO_010081: LOC116661149
subclass of: SO_0000673
so part of: LOC116661149
location: complement(join(599663..599767,600922..601487,606288..606454))
location: region:599663-606454:-1
so has part: feature:606288-606454:-1:exon
so has part: feature:600922-601487:-1:exon
so has part: feature:599663-599767:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:606288-606454:-1:exon

position:606288:-1
position: 606288
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:600922-601487:-1:exon

position:600922:-1
position: 600922
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:601487:-1
position: 601487
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:599663-599767:-1:exon

position:599767:-1
position: 599767
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

IGSF9B
type: Gene
subclass of: SO_0000704
RO_0002162: 419612
gene: IGSF9B
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 646803..698893
location: region:646803-698893:1
so has part: feature:646803-698893:1:exon
subclass of: SO_0000010

102519313
type: Gene
SIO_000068: ncbigene

position:646803:1
position: 646803
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:698893:1
position: 698893
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:646803-698893:1:exon

IGSF9B
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 419612
gene: IGSF9B
product: immunoglobulin superfamily member 9B
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 11 samples with support for all annotated introns
transcript id: XM_032472756.1
SIO_010081: IGSF9B
subclass of: SO_0000673
so part of: IGSF9B
location: join(646803..647054,656010..656207,657615..657761,662513..662664,662822..662939,663914..664055,664301..664446,666540..666682,666926..667066,667147..667263,667531..667681,668448..668559,670612..670787,671744..671971,672785..672869,674693..674854,675256..675301,675850..677499,684553..684674,687352..698893)
location: region:646803-698893:1
so has part: feature:646803-647054:1:exon
so has part: feature:656010-656207:1:exon
so has part: feature:657615-657761:1:exon
so has part: feature:662513-662664:1:exon
so has part: feature:662822-662939:1:exon
so has part: feature:663914-664055:1:exon
so has part: feature:664301-664446:1:exon
so has part: feature:666540-666682:1:exon
so has part: feature:666926-667066:1:exon
so has part: feature:667147-667263:1:exon
so has part: feature:667531-667681:1:exon
so has part: feature:668448-668559:1:exon
so has part: feature:670612-670787:1:exon
so has part: feature:671744-671971:1:exon
so has part: feature:672785-672869:1:exon
so has part: feature:674693-674854:1:exon
so has part: feature:675256-675301:1:exon
so has part: feature:675850-677499:1:exon
so has part: feature:684553-684674:1:exon
so has part: feature:687352-698893:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:646803-647054:1:exon

position:647054:1
position: 647054
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:656010-656207:1:exon

position:656010:1
position: 656010
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:656207:1
position: 656207
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:657615-657761:1:exon

position:657615:1
position: 657615
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:657761:1
position: 657761
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:662513-662664:1:exon

position:662513:1
position: 662513
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:662664:1
position: 662664
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:662822-662939:1:exon

position:662822:1
position: 662822
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:662939:1
position: 662939
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:663914-664055:1:exon

position:663914:1
position: 663914
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:664055:1
position: 664055
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:664301-664446:1:exon

position:664301:1
position: 664301
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:664446:1
position: 664446
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:666540-666682:1:exon

position:666540:1
position: 666540
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:666682:1
position: 666682
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:666926-667066:1:exon

position:666926:1
position: 666926
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:667066:1
position: 667066
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:667147-667263:1:exon

position:667147:1
position: 667147
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:667263:1
position: 667263
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:667531-667681:1:exon

position:667531:1
position: 667531
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:667681:1
position: 667681
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:668448-668559:1:exon

position:668448:1
position: 668448
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:668559:1
position: 668559
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:670612-670787:1:exon

position:670612:1
position: 670612
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:670787:1
position: 670787
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:671744-671971:1:exon

position:671744:1
position: 671744
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:671971:1
position: 671971
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:672785-672869:1:exon

position:672785:1
position: 672785
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:672869:1
position: 672869
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:674693-674854:1:exon

position:674693:1
position: 674693
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:674854:1
position: 674854
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:675256-675301:1:exon

position:675256:1
position: 675256
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:675301:1
position: 675301
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:675850-677499:1:exon

position:675850:1
position: 675850
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:677499:1
position: 677499
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:684553-684674:1:exon

position:684553:1
position: 684553
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:684674:1
position: 684674
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:687352-698893:1:exon

position:687352:1
position: 687352
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

IGSF9B
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 419612
gene: IGSF9B
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: protein turtle homolog B
translation: MIWYVATLIASVISARGLAAQGAHGLREEPEFVTARAGESVVLRCDVVHPVTGQPPPYVVEWFKFGVPIPIFIKFGYYPPHVDPEYAGRASLHDKASLRLEQVRAEDQGWYECKVLLLDQQYDTFHNGSWVHLTINAPPTFTETPPQYIEAKEGSSVTMTCTAFGNPKPIVTWLKEGTLLGANGKYQVSDGSLTVTSVSREDRGAYTCRAYSIQGEAMHTTHLLVQGPPFIVSPPENITVNISQDALLTCRAEAYPGNLTYTWYWQDENVYFQNDLKLRVRILIDGTLIIFRVKPEDAGKYTCVPSNSLGRSPSASAYLTVQYPARVLNMPPVIYVPVGIHGYIRCPVDAEPPATVVKWNKDGRPLQVEKNLGWTLLEDGSIRIEEATEEALGTYTCVPYNTLGTMGQSAPARLVLKDPPYFTVLPGWEYRQEAGRELLIPCAAAGDPFPVITWRKVGKPSRSKHNVLPSGSLQFRALSKEDHGEWECVATNVVTSITASTHLTVTGTSPHAPGSVRVQVSMTAANVSWEPGYDGGFEQTFSVWMKRAQFGPHDWLSLPVPLGPSWLLVDALEPETAYQFSVLAQNKLGASAFSEVVTVNTLAFPVTTPEPLVLVTPPRCLTANRTQQGVLLSWLPPANHSFPIDRYIMEFRVGERWETLEDAIPGTDGDFFARDLSQDTWYEFRVLAVMQDLVSEPSNIAGVSSTDIFPQPDLTEDGLARPVLAGIVATICFLAAAILFSTLAACFVNKQRKRKLKRKKDPPLSITHCRKSLESPLSSGKVSPESTRTLRAPSESSDDQGQPAAKRMLSPAREKELSLYKKTKRAIGSRKYSVAKAEAEAEATTPIELISRGPDGRFVMDPSEMEPSAKTRRIEGFPFAEETDMYPEFRQSDEENEDPLVPASVAALKSQLTPLSSSQESYLPPPAYSPRFQPRGLEGPGGLEGRLQATGQARPPAPRPFHHGQYYGYLSSSSPGEVEPPPFYMPEVGSPLSSVMSSPPLHAEGPFGHPTIPEENGENASNSTLPLTQTPTGGRSPEPWGRPEFPFGGLETPAMMFPHQLHPCDVPEGLQPAAGLPRGLPPAPLQVPAAYPGILSLEAPKGWAGKSPGRGPAPVPPAAKWQDRPVQPLVSQGQLRHTSQGMGIPVLPYPEPAEPGAHGGPSTLGLDTRWYEPQPRPRPSPRQARRAEPSLHQVVLQPSRLSPLTQSPLSSRTGSPELAARARPRPGLLQQAEMSEITLQPPAAVSFSRKSTPSTGSPSQSSRSGSPSYRPTMGFTTLATGYPSPPPGPAGPTDNLDVFGQTPSSRRMGEELLRPEPPPPSLTTSGTQTPAPGNAAVPERLEALKYQRIKKPKKSSKGSSKSKRRSDGSASQAQRLPDPQVLWPDEAVCLRRKKRHSRPDPFARLSDLCHRQLPEDQTAILSSVEHDDPGHATLL
SIO_010081: IGSF9B
subclass of: SO_0000673
so part of: IGSF9B
location: join(646991..647054,656010..656207,657615..657761,662513..662664,662822..662939,663914..664055,664301..664446,666540..666682,666926..667066,667147..667263,667531..667681,668448..668559,670612..670787,671744..671971,672785..672869,674693..674854,675256..675301,675850..677499,684553..684674,687352..687560)
location: region:646991-687560:1
so has part: feature:646991-647054:1:exon
so has part: feature:656010-656207:1:exon
so has part: feature:657615-657761:1:exon
so has part: feature:662513-662664:1:exon
so has part: feature:662822-662939:1:exon
so has part: feature:663914-664055:1:exon
so has part: feature:664301-664446:1:exon
so has part: feature:666540-666682:1:exon
so has part: feature:666926-667066:1:exon
so has part: feature:667147-667263:1:exon
so has part: feature:667531-667681:1:exon
so has part: feature:668448-668559:1:exon
so has part: feature:670612-670787:1:exon
so has part: feature:671744-671971:1:exon
so has part: feature:672785-672869:1:exon
so has part: feature:674693-674854:1:exon
so has part: feature:675256-675301:1:exon
so has part: feature:675850-677499:1:exon
so has part: feature:684553-684674:1:exon
so has part: feature:687352-687560:1:exon

XP_032328647.1
type: Protein
SIO_000068: ncbiprotein

position:646991:1
position: 646991
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:687560:1
position: 687560
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:646991-647054:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:656010-656207:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:657615-657761:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:662513-662664:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:662822-662939:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:663914-664055:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:664301-664446:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:666540-666682:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:666926-667066:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:667147-667263:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:667531-667681:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:668448-668559:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:670612-670787:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:671744-671971:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:672785-672869:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:674693-674854:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:675256-675301:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:675850-677499:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:684553-684674:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:687352-687560:1:exon

SPATA19
type: Gene
subclass of: SO_0000704
RO_0002162: 419612
gene: SPATA19
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 708850..724291
location: region:708850-724291:1
so has part: feature:708850-724291:1:exon
subclass of: SO_0000010

102519077
type: Gene
SIO_000068: ncbigene

position:708850:1
position: 708850
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:724291:1
position: 724291
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:708850-724291:1:exon

SPATA19
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 419612
gene: SPATA19
product: spermatogenesis associated 19, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_032472486.1
SIO_010081: SPATA19
subclass of: SO_0000673
so part of: SPATA19
location: join(708850..709102,710915..711039,716915..717087,719247..719303,719714..719806,719984..720075,720613..720753,722492..722569,722894..722969,724114..724291)
location: region:708850-724291:1
so has part: feature:708850-709102:1:exon
so has part: feature:710915-711039:1:exon
so has part: feature:716915-717087:1:exon
so has part: feature:719247-719303:1:exon
so has part: feature:719714-719806:1:exon
so has part: feature:719984-720075:1:exon
so has part: feature:720613-720753:1:exon
so has part: feature:722492-722569:1:exon
so has part: feature:722894-722969:1:exon
so has part: feature:724114-724291:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:708850-709102:1:exon

position:709102:1
position: 709102
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:710915-711039:1:exon

position:710915:1
position: 710915
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:711039:1
position: 711039
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:716915-717087:1:exon

position:716915:1
position: 716915
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:717087:1
position: 717087
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:719247-719303:1:exon

position:719247:1
position: 719247
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:719303:1
position: 719303
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:719714-719806:1:exon

position:719714:1
position: 719714
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:719806:1
position: 719806
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:719984-720075:1:exon

position:719984:1
position: 719984
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:720075:1
position: 720075
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:720613-720753:1:exon

position:720613:1
position: 720613
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:720753:1
position: 720753
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:722492-722569:1:exon

position:722492:1
position: 722492
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:722569:1
position: 722569
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:722894-722969:1:exon

position:722894:1
position: 722894
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:722969:1
position: 722969
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:724114-724291:1:exon

position:724114:1
position: 724114
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

SPATA19
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 419612
gene: SPATA19
product: spermatogenesis associated 19, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_032472484.1
SIO_010081: SPATA19
subclass of: SO_0000673
so part of: SPATA19
location: join(708850..709102,710915..711031,716915..717087,719247..719303,719714..719806,719984..720075,720613..720753,722492..722569,722894..722969,724114..724291)
location: region:708850-724291:1
so has part: feature:708850-709102:1:exon
so has part: feature:710915-711031:1:exon
so has part: feature:716915-717087:1:exon
so has part: feature:719247-719303:1:exon
so has part: feature:719714-719806:1:exon
so has part: feature:719984-720075:1:exon
so has part: feature:720613-720753:1:exon
so has part: feature:722492-722569:1:exon
so has part: feature:722894-722969:1:exon
so has part: feature:724114-724291:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:708850-709102:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:710915-711031:1:exon

position:711031:1
position: 711031
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:716915-717087:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:719247-719303:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:719714-719806:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:719984-720075:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:720613-720753:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:722492-722569:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:722894-722969:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:724114-724291:1:exon

SPATA19
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 419612
gene: SPATA19
product: spermatogenesis associated 19, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_032472487.1
SIO_010081: SPATA19
subclass of: SO_0000673
so part of: SPATA19
location: join(708850..709102,710915..711031,716915..717087,719714..719806,719984..720075,720613..720753,722492..722569,722894..722969,724114..724291)
location: region:708850-724291:1
so has part: feature:708850-709102:1:exon
so has part: feature:710915-711031:1:exon
so has part: feature:716915-717087:1:exon
so has part: feature:719714-719806:1:exon
so has part: feature:719984-720075:1:exon
so has part: feature:720613-720753:1:exon
so has part: feature:722492-722569:1:exon
so has part: feature:722894-722969:1:exon
so has part: feature:724114-724291:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:708850-709102:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:710915-711031:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:716915-717087:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:719714-719806:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:719984-720075:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:720613-720753:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:722492-722569:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:722894-722969:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:724114-724291:1:exon

SPATA19
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 419612
gene: SPATA19
product: spermatogenesis associated 19, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_032472485.1
SIO_010081: SPATA19
subclass of: SO_0000673
so part of: SPATA19
location: join(708850..709102,716915..717087,719247..719303,719714..719806,719984..720075,720613..720753,722492..722569,722894..722969,724114..724291)
location: region:708850-724291:1
so has part: feature:708850-709102:1:exon
so has part: feature:716915-717087:1:exon
so has part: feature:719247-719303:1:exon
so has part: feature:719714-719806:1:exon
so has part: feature:719984-720075:1:exon
so has part: feature:720613-720753:1:exon
so has part: feature:722492-722569:1:exon
so has part: feature:722894-722969:1:exon
so has part: feature:724114-724291:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:708850-709102:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:716915-717087:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:719247-719303:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:719714-719806:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:719984-720075:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:720613-720753:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:722492-722569:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:722894-722969:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:724114-724291:1:exon

SPATA19
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 419612
gene: SPATA19
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: spermatogenesis-associated protein 19, mitochondrial isoform X1
translation: MFTAALNASNWMQHRSPSVDVEVVESEAVSVVQHWLKKTEEEASKDIKEKMSASCPPSHGQDVHVTRDVVKHHLSKSDLLKSQSQEVLEERTRIQFIRWRRVVVGLHWAPPGCDGAPWSPVAPLQLCCLLWRKIHLSKMCFCFRIHSHTRIFQVPSEVRNDVMRDRIEQVRRSLCHLSDETSQELHDRNSCSDC
SIO_010081: SPATA19
subclass of: SO_0000673
so part of: SPATA19
location: join(717031..717087,719247..719303,719714..719806,719984..720075,720613..720753,722492..722569,722894..722960)
location: region:717031-722960:1
so has part: feature:717031-717087:1:exon
so has part: feature:719247-719303:1:exon
so has part: feature:719714-719806:1:exon
so has part: feature:719984-720075:1:exon
so has part: feature:720613-720753:1:exon
so has part: feature:722492-722569:1:exon
so has part: feature:722894-722960:1:exon

XP_032328375.1
type: Protein
SIO_000068: ncbiprotein

position:717031:1
position: 717031
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:722960:1
position: 722960
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:717031-717087:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:719247-719303:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:719714-719806:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:719984-720075:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:720613-720753:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:722492-722569:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:722894-722960:1:exon

SPATA19
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 419612
gene: SPATA19
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: spermatogenesis-associated protein 19, mitochondrial isoform X1
translation: MFTAALNASNWMQHRSPSVDVEVVESEAVSVVQHWLKKTEEEASKDIKEKMSASCPPSHGQDVHVTRDVVKHHLSKSDLLKSQSQEVLEERTRIQFIRWRRVVVGLHWAPPGCDGAPWSPVAPLQLCCLLWRKIHLSKMCFCFRIHSHTRIFQVPSEVRNDVMRDRIEQVRRSLCHLSDETSQELHDRNSCSDC
SIO_010081: SPATA19
subclass of: SO_0000673
so part of: SPATA19
location: join(717031..717087,719247..719303,719714..719806,719984..720075,720613..720753,722492..722569,722894..722960)
location: region:717031-722960:1
so has part: feature:717031-717087:1:exon
so has part: feature:719247-719303:1:exon
so has part: feature:719714-719806:1:exon
so has part: feature:719984-720075:1:exon
so has part: feature:720613-720753:1:exon
so has part: feature:722492-722569:1:exon
so has part: feature:722894-722960:1:exon

XP_032328376.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:717031-717087:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:719247-719303:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:719714-719806:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:719984-720075:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:720613-720753:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:722492-722569:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:722894-722960:1:exon

SPATA19
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 419612
gene: SPATA19
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: spermatogenesis-associated protein 19, mitochondrial isoform X1
translation: MFTAALNASNWMQHRSPSVDVEVVESEAVSVVQHWLKKTEEEASKDIKEKMSASCPPSHGQDVHVTRDVVKHHLSKSDLLKSQSQEVLEERTRIQFIRWRRVVVGLHWAPPGCDGAPWSPVAPLQLCCLLWRKIHLSKMCFCFRIHSHTRIFQVPSEVRNDVMRDRIEQVRRSLCHLSDETSQELHDRNSCSDC
SIO_010081: SPATA19
subclass of: SO_0000673
so part of: SPATA19
location: join(717031..717087,719247..719303,719714..719806,719984..720075,720613..720753,722492..722569,722894..722960)
location: region:717031-722960:1
so has part: feature:717031-717087:1:exon
so has part: feature:719247-719303:1:exon
so has part: feature:719714-719806:1:exon
so has part: feature:719984-720075:1:exon
so has part: feature:720613-720753:1:exon
so has part: feature:722492-722569:1:exon
so has part: feature:722894-722960:1:exon

XP_032328377.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:717031-717087:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:719247-719303:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:719714-719806:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:719984-720075:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:720613-720753:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:722492-722569:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:722894-722960:1:exon

SPATA19
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 419612
gene: SPATA19
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: spermatogenesis-associated protein 19, mitochondrial isoform X2
translation: MFTAALNASNWMQHRSPSVTEEEASKDIKEKMSASCPPSHGQDVHVTRDVVKHHLSKSDLLKSQSQEVLEERTRIQFIRWRRVVVGLHWAPPGCDGAPWSPVAPLQLCCLLWRKIHLSKMCFCFRIHSHTRIFQVPSEVRNDVMRDRIEQVRRSLCHLSDETSQELHDRNSCSDC
SIO_010081: SPATA19
subclass of: SO_0000673
so part of: SPATA19
location: join(717031..717087,719714..719806,719984..720075,720613..720753,722492..722569,722894..722960)
location: region:717031-722960:1
so has part: feature:717031-717087:1:exon
so has part: feature:719714-719806:1:exon
so has part: feature:719984-720075:1:exon
so has part: feature:720613-720753:1:exon
so has part: feature:722492-722569:1:exon
so has part: feature:722894-722960:1:exon

XP_032328378.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:717031-717087:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:719714-719806:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:719984-720075:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:720613-720753:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:722492-722569:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:722894-722960:1:exon

LOC116661144
type: Gene
subclass of: SO_0000704
RO_0002162: 419612
gene: LOC116661144
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(718218..720534)
location: region:718218-720534:-1
so has part: feature:718218-720534:-1:exon
subclass of: SO_0000011

116661144
type: Gene
SIO_000068: ncbigene

position:718218:-1
position: 718218
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:720534:-1
position: 720534
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:718218-720534:-1:exon

LOC116661144
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 419612
nc RNA class: lncRNA
gene: LOC116661144
product: uncharacterized LOC116661144
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XR_004316907.1
SIO_010081: LOC116661144
subclass of: SO_0000673
so part of: LOC116661144
location: complement(join(718218..718452,719707..719834,720405..720534))
location: region:718218-720534:-1
so has part: feature:720405-720534:-1:exon
so has part: feature:719707-719834:-1:exon
so has part: feature:718218-718452:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:720405-720534:-1:exon

position:720405:-1
position: 720405
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:719707-719834:-1:exon

position:719707:-1
position: 719707
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:719834:-1
position: 719834
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:718218-718452:-1:exon

position:718452:-1
position: 718452
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

SPATA19
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 419612
gene: SPATA19
product: spermatogenesis associated 19, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_032472488.1
SIO_010081: SPATA19
subclass of: SO_0000673
so part of: SPATA19
location: join(718918..719079,719247..719303,719714..719806,719984..720075,722492..722569,722894..722969,724114..724291)
location: region:718918-724291:1
so has part: feature:718918-719079:1:exon
so has part: feature:719247-719303:1:exon
so has part: feature:719714-719806:1:exon
so has part: feature:719984-720075:1:exon
so has part: feature:722492-722569:1:exon
so has part: feature:722894-722969:1:exon
so has part: feature:724114-724291:1:exon

position:718918:1
position: 718918
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:718918-719079:1:exon

position:719079:1
position: 719079
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:719247-719303:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:719714-719806:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:719984-720075:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:722492-722569:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:722894-722969:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:724114-724291:1:exon

SPATA19
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 419612
gene: SPATA19
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: spermatogenesis-associated protein 19, mitochondrial isoform X3
translation: MIITTWIVYIFARKGAGFPFPPKVSSDVEVVESEAVSVVQHWLKKTEEEASKDIKEKMSASCPPSHGQDVHVTRDVVKHHLSKSDLLKSQSQEVLEERTRIQFIRWSHTRIFQVPSEVRNDVMRDRIEQVRRSLCHLSDETSQELHDRNSCSDC
SIO_010081: SPATA19
subclass of: SO_0000673
so part of: SPATA19
location: join(719002..719079,719247..719303,719714..719806,719984..720075,722492..722569,722894..722960)
location: region:719002-722960:1
so has part: feature:719002-719079:1:exon
so has part: feature:719247-719303:1:exon
so has part: feature:719714-719806:1:exon
so has part: feature:719984-720075:1:exon
so has part: feature:722492-722569:1:exon
so has part: feature:722894-722960:1:exon

XP_032328379.1
type: Protein
SIO_000068: ncbiprotein

position:719002:1
position: 719002
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:719002-719079:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:719247-719303:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:719714-719806:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:719984-720075:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:722492-722569:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:722894-722960:1:exon

OPCML
type: Gene
subclass of: SO_0000704
RO_0002162: 419612
gene: OPCML
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 941255..1813275
location: region:941255-1813275:1
so has part: feature:941255-1813275:1:exon
subclass of: SO_0000010

102505279
type: Gene
SIO_000068: ncbigene

position:941255:1
position: 941255
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1813275:1
position: 1813275
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:941255-1813275:1:exon

OPCML
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 419612
gene: OPCML
product: opioid binding protein/cell adhesion molecule like, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XR_004316937.1
SIO_010081: OPCML
so part of: OPCML
location: join(941255..941676,1377749..1377833,1605199..1605431,1708380..1708505,1777175..1777312,1777669..1777789,1778246..1778397,1779283..1779309,1789940..1794322,1797617..1797620,1813265..1813275)
location: region:941255-1813275:1
so has part: feature:941255-941676:1:exon
so has part: feature:1377749-1377833:1:exon
so has part: feature:1605199-1605431:1:exon
so has part: feature:1708380-1708505:1:exon
so has part: feature:1777175-1777312:1:exon
so has part: feature:1777669-1777789:1:exon
so has part: feature:1778246-1778397:1:exon
so has part: feature:1779283-1779309:1:exon
so has part: feature:1789940-1794322:1:exon
so has part: feature:1797617-1797620:1:exon
so has part: feature:1813265-1813275:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:941255-941676:1:exon

position:941676:1
position: 941676
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1377749-1377833:1:exon

position:1377749:1
position: 1377749
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1377833:1
position: 1377833
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1605199-1605431:1:exon

position:1605199:1
position: 1605199
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1605431:1
position: 1605431
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1708380-1708505:1:exon

position:1708380:1
position: 1708380
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1708505:1
position: 1708505
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1777175-1777312:1:exon

position:1777175:1
position: 1777175
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1777312:1
position: 1777312
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1777669-1777789:1:exon

position:1777669:1
position: 1777669
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1777789:1
position: 1777789
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1778246-1778397:1:exon

position:1778246:1
position: 1778246
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1778397:1
position: 1778397
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1779283-1779309:1:exon

position:1779283:1
position: 1779283
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1779309:1
position: 1779309
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1789940-1794322:1:exon

position:1789940:1
position: 1789940
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1794322:1
position: 1794322
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1797617-1797620:1:exon

position:1797617:1
position: 1797617
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1797620:1
position: 1797620
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1813265-1813275:1:exon

position:1813265:1
position: 1813265
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

OPCML
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 419612
gene: OPCML
product: opioid binding protein/cell adhesion molecule like, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XR_004316938.1
SIO_010081: OPCML
so part of: OPCML
location: join(941255..941676,1377749..1377833,1605199..1605431,1708380..1708505,1777175..1777312,1777669..1777789,1778246..1778397,1779283..1779309,1789940..1794322,1797617..1797620,1798823..1798832)
location: region:941255-1798832:1
so has part: feature:941255-941676:1:exon
so has part: feature:1377749-1377833:1:exon
so has part: feature:1605199-1605431:1:exon
so has part: feature:1708380-1708505:1:exon
so has part: feature:1777175-1777312:1:exon
so has part: feature:1777669-1777789:1:exon
so has part: feature:1778246-1778397:1:exon
so has part: feature:1779283-1779309:1:exon
so has part: feature:1789940-1794322:1:exon
so has part: feature:1797617-1797620:1:exon
so has part: feature:1798823-1798832:1:exon

position:1798832:1
position: 1798832
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:941255-941676:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1377749-1377833:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1605199-1605431:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1708380-1708505:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1777175-1777312:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1777669-1777789:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1778246-1778397:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1779283-1779309:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1789940-1794322:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1797617-1797620:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1798823-1798832:1:exon

position:1798823:1
position: 1798823
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

OPCML
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 419612
gene: OPCML
product: opioid binding protein/cell adhesion molecule like, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_032472534.1
SIO_010081: OPCML
subclass of: SO_0000673
so part of: OPCML
location: join(941255..941676,1377749..1377833,1605199..1605431,1708380..1708505,1777175..1777312,1777669..1777789,1778246..1778397,1779283..1779309,1789940..1795124)
location: region:941255-1795124:1
so has part: feature:941255-941676:1:exon
so has part: feature:1377749-1377833:1:exon
so has part: feature:1605199-1605431:1:exon
so has part: feature:1708380-1708505:1:exon
so has part: feature:1777175-1777312:1:exon
so has part: feature:1777669-1777789:1:exon
so has part: feature:1778246-1778397:1:exon
so has part: feature:1779283-1779309:1:exon
so has part: feature:1789940-1795124:1:exon

position:1795124:1
position: 1795124
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:941255-941676:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1377749-1377833:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1605199-1605431:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1708380-1708505:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1777175-1777312:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1777669-1777789:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1778246-1778397:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1779283-1779309:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1789940-1795124:1:exon

OPCML
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 419612
gene: OPCML
product: opioid binding protein/cell adhesion molecule like, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_032472535.1
SIO_010081: OPCML
subclass of: SO_0000673
so part of: OPCML
location: join(941258..941676,1377749..1377833,1605199..1605431,1708380..1708505,1777175..1777312,1777669..1777789,1778246..1778397,1789940..1795124)
location: region:941258-1795124:1
so has part: feature:941258-941676:1:exon
so has part: feature:1377749-1377833:1:exon
so has part: feature:1605199-1605431:1:exon
so has part: feature:1708380-1708505:1:exon
so has part: feature:1777175-1777312:1:exon
so has part: feature:1777669-1777789:1:exon
so has part: feature:1778246-1778397:1:exon
so has part: feature:1789940-1795124:1:exon

position:941258:1
position: 941258
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:941258-941676:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1377749-1377833:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1605199-1605431:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1708380-1708505:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1777175-1777312:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1777669-1777789:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1778246-1778397:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1789940-1795124:1:exon

OPCML
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 419612
gene: OPCML
product: opioid binding protein/cell adhesion molecule like, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_032472536.1
SIO_010081: OPCML
subclass of: SO_0000673
so part of: OPCML
location: join(941259..941676,1377749..1377833,1605199..1605431,1708380..1708505,1777175..1777312,1777669..1777789,1778246..1778397,1791063..1795124)
location: region:941259-1795124:1
so has part: feature:941259-941676:1:exon
so has part: feature:1377749-1377833:1:exon
so has part: feature:1605199-1605431:1:exon
so has part: feature:1708380-1708505:1:exon
so has part: feature:1777175-1777312:1:exon
so has part: feature:1777669-1777789:1:exon
so has part: feature:1778246-1778397:1:exon
so has part: feature:1791063-1795124:1:exon

position:941259:1
position: 941259
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:941259-941676:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1377749-1377833:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1605199-1605431:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1708380-1708505:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1777175-1777312:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1777669-1777789:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1778246-1778397:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1791063-1795124:1:exon

position:1791063:1
position: 1791063
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

OPCML
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 419612
gene: OPCML
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: opioid-binding protein/cell adhesion molecule isoform X3
translation: MVLTSCVSVQGKARDAACLLPLSSALSLPLQTLDLNLLRIQHRGRRPRRQQQQQQRERAQPPRHRSLKMHHPAWWAVFSVTVALLFIPGVPVRSGDATFPKAMDNVTVRQGESATLRCTIDDRVTRVAWLNRSTILYAGNDKWSIDPRVIILVNTPTQYSIMIQNVDVYDEGPYTCSVQTDNHPKTSRVHLIVQVPPQIMNISSDVTVNEGSSVTLLCLAIGRPEPTVTWRHLSVEEGQGFVSEDEYLEISDIKRDQSGDYECSALNDVAAPDVRKVKITVNYPPYISKAKNTGVSVGQKGMLSCEAPAVPVAEFQWFKEDTRLATGLEGVRIENKGHISTLTFFNVSEKDYGNYTCVATNKLGNTNASITLYDTGISRITCQLRV
SIO_010081: OPCML
subclass of: SO_0000673
so part of: OPCML
location: join(941412..941676,1377749..1377833,1605199..1605431,1708380..1708505,1777175..1777312,1777669..1777789,1778246..1778397,1791063..1791103)
location: region:941412-1791103:1
so has part: feature:941412-941676:1:exon
so has part: feature:1377749-1377833:1:exon
so has part: feature:1605199-1605431:1:exon
so has part: feature:1708380-1708505:1:exon
so has part: feature:1777175-1777312:1:exon
so has part: feature:1777669-1777789:1:exon
so has part: feature:1778246-1778397:1:exon
so has part: feature:1791063-1791103:1:exon

XP_032328427.1
type: Protein
SIO_000068: ncbiprotein

position:941412:1
position: 941412
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1791103:1
position: 1791103
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:941412-941676:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1377749-1377833:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1605199-1605431:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1708380-1708505:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1777175-1777312:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1777669-1777789:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1778246-1778397:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1791063-1791103:1:exon

OPCML
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 419612
gene: OPCML
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: opioid-binding protein/cell adhesion molecule isoform X1
translation: MVLTSCVSVQGKARDAACLLPLSSALSLPLQTLDLNLLRIQHRGRRPRRQQQQQQRERAQPPRHRSLKMHHPAWWAVFSVTVALLFIPGVPVRSGDATFPKAMDNVTVRQGESATLRCTIDDRVTRVAWLNRSTILYAGNDKWSIDPRVIILVNTPTQYSIMIQNVDVYDEGPYTCSVQTDNHPKTSRVHLIVQVPPQIMNISSDVTVNEGSSVTLLCLAIGRPEPTVTWRHLSVEEGQGFVSEDEYLEISDIKRDQSGDYECSALNDVAAPDVRKVKITVNYPPYISKAKNTGVSVGQKGMLSCEAPAVPVAEFQWFKEDTRLATGLEGVRIENKGHISTLTFFNVSEKDYGNYTCVATNKLGNTNASITLYEISPSPAVAGPGAVIDGVNSASRALAGLWLSGTLFAHFFIKF
SIO_010081: OPCML
subclass of: SO_0000673
so part of: OPCML
location: join(941412..941676,1377749..1377833,1605199..1605431,1708380..1708505,1777175..1777312,1777669..1777789,1778246..1778397,1779283..1779309,1789940..1790040)
location: region:941412-1790040:1
so has part: feature:941412-941676:1:exon
so has part: feature:1377749-1377833:1:exon
so has part: feature:1605199-1605431:1:exon
so has part: feature:1708380-1708505:1:exon
so has part: feature:1777175-1777312:1:exon
so has part: feature:1777669-1777789:1:exon
so has part: feature:1778246-1778397:1:exon
so has part: feature:1779283-1779309:1:exon
so has part: feature:1789940-1790040:1:exon

XP_032328425.1
type: Protein
SIO_000068: ncbiprotein

position:1790040:1
position: 1790040
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:941412-941676:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1377749-1377833:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1605199-1605431:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1708380-1708505:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1777175-1777312:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1777669-1777789:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1778246-1778397:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1779283-1779309:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1789940-1790040:1:exon

OPCML
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 419612
gene: OPCML
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: opioid-binding protein/cell adhesion molecule isoform X2
translation: MVLTSCVSVQGKARDAACLLPLSSALSLPLQTLDLNLLRIQHRGRRPRRQQQQQQRERAQPPRHRSLKMHHPAWWAVFSVTVALLFIPGVPVRSGDATFPKAMDNVTVRQGESATLRCTIDDRVTRVAWLNRSTILYAGNDKWSIDPRVIILVNTPTQYSIMIQNVDVYDEGPYTCSVQTDNHPKTSRVHLIVQVPPQIMNISSDVTVNEGSSVTLLCLAIGRPEPTVTWRHLSVEEGQGFVSEDEYLEISDIKRDQSGDYECSALNDVAAPDVRKVKITVNYPPYISKAKNTGVSVGQKGMLSCEAPAVPVAEFQWFKEDTRLATGLEGVRIENKGHISTLTFFNVSEKDYGNYTCVATNKLGNTNASITLYGPGAVIDGVNSASRALAGLWLSGTLFAHFFIKF
SIO_010081: OPCML
subclass of: SO_0000673
so part of: OPCML
location: join(941412..941676,1377749..1377833,1605199..1605431,1708380..1708505,1777175..1777312,1777669..1777789,1778246..1778397,1789940..1790040)
location: region:941412-1790040:1
so has part: feature:941412-941676:1:exon
so has part: feature:1377749-1377833:1:exon
so has part: feature:1605199-1605431:1:exon
so has part: feature:1708380-1708505:1:exon
so has part: feature:1777175-1777312:1:exon
so has part: feature:1777669-1777789:1:exon
so has part: feature:1778246-1778397:1:exon
so has part: feature:1789940-1790040:1:exon

XP_032328426.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:941412-941676:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1377749-1377833:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1605199-1605431:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1708380-1708505:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1777175-1777312:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1777669-1777789:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1778246-1778397:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1789940-1790040:1:exon

LOC116661165
type: Gene
subclass of: SO_0000704
RO_0002162: 419612
gene: LOC116661165
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 988466..1007669
location: region:988466-1007669:1
so has part: feature:988466-1007669:1:exon
subclass of: SO_0000011

116661165
type: Gene
SIO_000068: ncbigene

position:988466:1
position: 988466
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1007669:1
position: 1007669
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:988466-1007669:1:exon

LOC116661165
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 419612
nc RNA class: lncRNA
gene: LOC116661165
product: uncharacterized LOC116661165
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XR_004316943.1
SIO_010081: LOC116661165
subclass of: SO_0000673
so part of: LOC116661165
location: join(988466..988560,991371..991375,1006380..1006384,1007660..1007669)
location: region:988466-1007669:1
so has part: feature:988466-988560:1:exon
so has part: feature:991371-991375:1:exon
so has part: feature:1006380-1006384:1:exon
so has part: feature:1007660-1007669:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:988466-988560:1:exon

position:988560:1
position: 988560
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:991371-991375:1:exon

position:991371:1
position: 991371
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:991375:1
position: 991375
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1006380-1006384:1:exon

position:1006380:1
position: 1006380
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1006384:1
position: 1006384
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1007660-1007669:1:exon

position:1007660:1
position: 1007660
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC116661164
type: Gene
subclass of: SO_0000704
RO_0002162: 419612
gene: LOC116661164
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1300668..1306131
location: region:1300668-1306131:1
so has part: feature:1300668-1306131:1:exon
subclass of: SO_0000011

116661164
type: Gene
SIO_000068: ncbigene

position:1300668:1
position: 1300668
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1306131:1
position: 1306131
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1300668-1306131:1:exon

LOC116661164
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 419612
nc RNA class: lncRNA
gene: LOC116661164
product: uncharacterized LOC116661164, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XR_004316940.1
SIO_010081: LOC116661164
subclass of: SO_0000673
so part of: LOC116661164
location: join(1300668..1303389,1303581..1303771,1304050..1306131)
location: region:1300668-1306131:1
so has part: feature:1300668-1303389:1:exon
so has part: feature:1303581-1303771:1:exon
so has part: feature:1304050-1306131:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1300668-1303389:1:exon

position:1303389:1
position: 1303389
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1303581-1303771:1:exon

position:1303581:1
position: 1303581
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1303771:1
position: 1303771
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1304050-1306131:1:exon

position:1304050:1
position: 1304050
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC116661164
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 419612
nc RNA class: lncRNA
gene: LOC116661164
product: uncharacterized LOC116661164, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XR_004316942.1
SIO_010081: LOC116661164
subclass of: SO_0000673
so part of: LOC116661164
location: join(1300668..1302387,1303186..1303389,1303581..1306131)
location: region:1300668-1306131:1
so has part: feature:1300668-1302387:1:exon
so has part: feature:1303186-1303389:1:exon
so has part: feature:1303581-1306131:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1300668-1302387:1:exon

position:1302387:1
position: 1302387
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1303186-1303389:1:exon

position:1303186:1
position: 1303186
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1303581-1306131:1:exon

LOC116661164
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 419612
nc RNA class: lncRNA
gene: LOC116661164
product: uncharacterized LOC116661164, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XR_004316941.1
SIO_010081: LOC116661164
subclass of: SO_0000673
so part of: LOC116661164
location: join(1300668..1301331,1302199..1303389,1303581..1306131)
location: region:1300668-1306131:1
so has part: feature:1300668-1301331:1:exon
so has part: feature:1302199-1303389:1:exon
so has part: feature:1303581-1306131:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1300668-1301331:1:exon

position:1301331:1
position: 1301331
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1302199-1303389:1:exon

position:1302199:1
position: 1302199
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1303581-1306131:1:exon

LOC116661166
type: Gene
subclass of: SO_0000704
RO_0002162: 419612
gene: LOC116661166
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1320354..1329494)
location: region:1320354-1329494:-1
so has part: feature:1320354-1329494:-1:exon
subclass of: SO_0000011

116661166
type: Gene
SIO_000068: ncbigene

position:1320354:-1
position: 1320354
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1329494:-1
position: 1329494
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1320354-1329494:-1:exon

LOC116661166
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 419612
nc RNA class: lncRNA
gene: LOC116661166
product: uncharacterized LOC116661166
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XR_004316944.1
SIO_010081: LOC116661166
subclass of: SO_0000673
so part of: LOC116661166
location: complement(join(1320354..1320363,1322482..1322484,1329398..1329494))
location: region:1320354-1329494:-1
so has part: feature:1329398-1329494:-1:exon
so has part: feature:1322482-1322484:-1:exon
so has part: feature:1320354-1320363:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1329398-1329494:-1:exon

position:1329398:-1
position: 1329398
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1322482-1322484:-1:exon

position:1322482:-1
position: 1322482
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1322484:-1
position: 1322484
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1320354-1320363:-1:exon

position:1320363:-1
position: 1320363
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC116661168
type: Gene
subclass of: SO_0000704
RO_0002162: 419612
gene: LOC116661168
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1509486..1513283
location: region:1509486-1513283:1
so has part: feature:1509486-1513283:1:exon
subclass of: SO_0000011

116661168
type: Gene
SIO_000068: ncbigene

position:1509486:1
position: 1509486
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1513283:1
position: 1513283
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1509486-1513283:1:exon

LOC116661168
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 419612
nc RNA class: lncRNA
gene: LOC116661168
product: uncharacterized LOC116661168
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XR_004316945.1
SIO_010081: LOC116661168
subclass of: SO_0000673
so part of: LOC116661168
location: join(1509486..1509496,1511396..1511399,1512682..1513283)
location: region:1509486-1513283:1
so has part: feature:1509486-1509496:1:exon
so has part: feature:1511396-1511399:1:exon
so has part: feature:1512682-1513283:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1509486-1509496:1:exon

position:1509496:1
position: 1509496
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1511396-1511399:1:exon

position:1511396:1
position: 1511396
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1511399:1
position: 1511399
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1512682-1513283:1:exon

position:1512682:1
position: 1512682
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC116661169
type: Gene
subclass of: SO_0000704
RO_0002162: 419612
gene: LOC116661169
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1673832..1693190
location: region:1673832-1693190:1
so has part: feature:1673832-1693190:1:exon
subclass of: SO_0000011

116661169
type: Gene
SIO_000068: ncbigene

position:1673832:1
position: 1673832
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1693190:1
position: 1693190
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1673832-1693190:1:exon

LOC116661169
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 419612
nc RNA class: lncRNA
gene: LOC116661169
product: uncharacterized LOC116661169
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XR_004316946.1
SIO_010081: LOC116661169
subclass of: SO_0000673
so part of: LOC116661169
location: join(1673832..1673842,1677137..1677139,1693110..1693190)
location: region:1673832-1693190:1
so has part: feature:1673832-1673842:1:exon
so has part: feature:1677137-1677139:1:exon
so has part: feature:1693110-1693190:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1673832-1673842:1:exon

position:1673842:1
position: 1673842
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1677137-1677139:1:exon

position:1677137:1
position: 1677137
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1677139:1
position: 1677139
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1693110-1693190:1:exon

position:1693110:1
position: 1693110
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

NTM
type: Gene
subclass of: SO_0000704
RO_0002162: 419612
gene: NTM
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1842091..2662751)
location: region:1842091-2662751:-1
so has part: feature:1842091-2662751:-1:exon
subclass of: SO_0000010

102505015
type: Gene
SIO_000068: ncbigene

position:1842091:-1
position: 1842091
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2662751:-1
position: 2662751
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1842091-2662751:-1:exon

NTM
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 419612
gene: NTM
product: neurotrimin, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_032472417.1
SIO_010081: NTM
subclass of: SO_0000673
so part of: NTM
location: complement(join(1842091..1842703,1842992..1843096,1861516..1861636,1863484..1863618,1946724..1946849,1996022..1996254,2195963..2196047,2662502..2662751))
location: region:1842091-2662751:-1
so has part: feature:2662502-2662751:-1:exon
so has part: feature:2195963-2196047:-1:exon
so has part: feature:1996022-1996254:-1:exon
so has part: feature:1946724-1946849:-1:exon
so has part: feature:1863484-1863618:-1:exon
so has part: feature:1861516-1861636:-1:exon
so has part: feature:1842992-1843096:-1:exon
so has part: feature:1842091-1842703:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2662502-2662751:-1:exon

position:2662502:-1
position: 2662502
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2195963-2196047:-1:exon

position:2195963:-1
position: 2195963
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2196047:-1
position: 2196047
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1996022-1996254:-1:exon

position:1996022:-1
position: 1996022
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1996254:-1
position: 1996254
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1946724-1946849:-1:exon

position:1946724:-1
position: 1946724
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1946849:-1
position: 1946849
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1863484-1863618:-1:exon

position:1863484:-1
position: 1863484
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1863618:-1
position: 1863618
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1861516-1861636:-1:exon

position:1861516:-1
position: 1861516
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1861636:-1
position: 1861636
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1842992-1843096:-1:exon

position:1842992:-1
position: 1842992
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1843096:-1
position: 1843096
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1842091-1842703:-1:exon

position:1842703:-1
position: 1842703
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

NTM
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 419612
gene: NTM
product: neurotrimin, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_032472419.1
SIO_010081: NTM
subclass of: SO_0000673
so part of: NTM
location: complement(join(1842091..1842703,1842992..1843096,1861516..1861636,1863484..1863618,1946724..1946849,1996022..1996254,2195963..2196047,2407297..2407415,2662502..2662751))
location: region:1842091-2662751:-1
so has part: feature:2662502-2662751:-1:exon
so has part: feature:2407297-2407415:-1:exon
so has part: feature:2195963-2196047:-1:exon
so has part: feature:1996022-1996254:-1:exon
so has part: feature:1946724-1946849:-1:exon
so has part: feature:1863484-1863618:-1:exon
so has part: feature:1861516-1861636:-1:exon
so has part: feature:1842992-1843096:-1:exon
so has part: feature:1842091-1842703:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2662502-2662751:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2407297-2407415:-1:exon

position:2407297:-1
position: 2407297
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2407415:-1
position: 2407415
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2195963-2196047:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1996022-1996254:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1946724-1946849:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1863484-1863618:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1861516-1861636:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1842992-1843096:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1842091-1842703:-1:exon

NTM
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 419612
gene: NTM
product: neurotrimin, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_032472420.1
SIO_010081: NTM
subclass of: SO_0000673
so part of: NTM
location: complement(join(1842091..1842703,1842992..1843096,1861516..1861636,1863484..1863618,1946724..1946849,1996022..1996254,2195963..2196047,2407297..2407415,2407941..2408344))
location: region:1842091-2408344:-1
so has part: feature:2407941-2408344:-1:exon
so has part: feature:2407297-2407415:-1:exon
so has part: feature:2195963-2196047:-1:exon
so has part: feature:1996022-1996254:-1:exon
so has part: feature:1946724-1946849:-1:exon
so has part: feature:1863484-1863618:-1:exon
so has part: feature:1861516-1861636:-1:exon
so has part: feature:1842992-1843096:-1:exon
so has part: feature:1842091-1842703:-1:exon

position:2408344:-1
position: 2408344
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2407941-2408344:-1:exon

position:2407941:-1
position: 2407941
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2407297-2407415:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2195963-2196047:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1996022-1996254:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1946724-1946849:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1863484-1863618:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1861516-1861636:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1842992-1843096:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1842091-1842703:-1:exon

NTM
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 419612
gene: NTM
product: neurotrimin, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_032472418.1
SIO_010081: NTM
subclass of: SO_0000673
so part of: NTM
location: complement(join(1842091..1842700,1842992..1843096,1861516..1861636,1863484..1863618,1946724..1946849,1996022..1996254,2195963..2196444))
location: region:1842091-2196444:-1
so has part: feature:2195963-2196444:-1:exon
so has part: feature:1996022-1996254:-1:exon
so has part: feature:1946724-1946849:-1:exon
so has part: feature:1863484-1863618:-1:exon
so has part: feature:1861516-1861636:-1:exon
so has part: feature:1842992-1843096:-1:exon
so has part: feature:1842091-1842700:-1:exon

position:2196444:-1
position: 2196444
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2195963-2196444:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1996022-1996254:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1946724-1946849:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1863484-1863618:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1861516-1861636:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1842992-1843096:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1842091-1842700:-1:exon

position:1842700:-1
position: 1842700
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

NTM
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 419612
gene: NTM
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: neurotrimin isoform X1
translation: MKTIQAKMHNSLSWAIFTGLAALFLFQGVPVRSGDATFPKAMDNVTVRQGESATLRCSIDNRVTRVAWLNRSTILYAGNDKWCLDPRVVLLSNTQTQYSIEIQNVDVYDEGPYTCSVQTDNHPKTSRVHLIVQVSPKIVEISSDVSINEGNNVSLTCIATGRPEPTVTWRHISPKAVGFVSEDEYLEIQGITREQSGDYECSASNDVAAPVVRRVKVTVNYPPYISEAKGTGVPVGQKGTLQCEASAVPSAEFQWYKDDKRPRRRQRGEQRDAPEGRLRAAAPAPRLAPLPPQVLIRHAGCGPTCTPHRVASVTRRAGLSRSAHRGAPHQGNFWSRPPHVPSIETNAVRREGPGCRGGPAPRLCHYCVCDEMQNQKK
SIO_010081: NTM
subclass of: SO_0000673
so part of: NTM
location: complement(join(1842457..1842703,1842992..1843096,1861516..1861636,1863484..1863618,1946724..1946849,1996022..1996254,2195963..2196047,2662502..2662583))
location: region:1842457-2662583:-1
so has part: feature:2662502-2662583:-1:exon
so has part: feature:2195963-2196047:-1:exon
so has part: feature:1996022-1996254:-1:exon
so has part: feature:1946724-1946849:-1:exon
so has part: feature:1863484-1863618:-1:exon
so has part: feature:1861516-1861636:-1:exon
so has part: feature:1842992-1843096:-1:exon
so has part: feature:1842457-1842703:-1:exon

XP_032328308.1
type: Protein
SIO_000068: ncbiprotein

position:1842457:-1
position: 1842457
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2662583:-1
position: 2662583
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2662502-2662583:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2195963-2196047:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1996022-1996254:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1946724-1946849:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1863484-1863618:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1861516-1861636:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1842992-1843096:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1842457-1842703:-1:exon

NTM
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 419612
gene: NTM
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: neurotrimin isoform X3
translation: MIGKETGKVGRGGRRGGTGVPVRSGDATFPKAMDNVTVRQGESATLRCSIDNRVTRVAWLNRSTILYAGNDKWCLDPRVVLLSNTQTQYSIEIQNVDVYDEGPYTCSVQTDNHPKTSRVHLIVQVSPKIVEISSDVSINEGNNVSLTCIATGRPEPTVTWRHISPKAVGFVSEDEYLEIQGITREQSGDYECSASNDVAAPVVRRVKVTVNYPPYISEAKGTGVPVGQKGTLQCEASAVPSAEFQWYKDDKRPRRRQRGEQRDAPEGRLRAAAPAPRLAPLPPQVLIRHAGCGPTCTPHRVASVTRRAGLSRSAHRGAPHQGNFWSRPPHVPSIETNAVRREGPGCRGGPAPRLCHYCVCDEMQNQKK
SIO_010081: NTM
subclass of: SO_0000673
so part of: NTM
location: complement(join(1842457..1842703,1842992..1843096,1861516..1861636,1863484..1863618,1946724..1946849,1996022..1996254,2195963..2196047,2407297..2407351))
location: region:1842457-2407351:-1
so has part: feature:2407297-2407351:-1:exon
so has part: feature:2195963-2196047:-1:exon
so has part: feature:1996022-1996254:-1:exon
so has part: feature:1946724-1946849:-1:exon
so has part: feature:1863484-1863618:-1:exon
so has part: feature:1861516-1861636:-1:exon
so has part: feature:1842992-1843096:-1:exon
so has part: feature:1842457-1842703:-1:exon

XP_032328310.1
type: Protein
SIO_000068: ncbiprotein

position:2407351:-1
position: 2407351
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2407297-2407351:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2195963-2196047:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1996022-1996254:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1946724-1946849:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1863484-1863618:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1861516-1861636:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1842992-1843096:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1842457-1842703:-1:exon

NTM
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 419612
gene: NTM
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: neurotrimin isoform X3
translation: MIGKETGKVGRGGRRGGTGVPVRSGDATFPKAMDNVTVRQGESATLRCSIDNRVTRVAWLNRSTILYAGNDKWCLDPRVVLLSNTQTQYSIEIQNVDVYDEGPYTCSVQTDNHPKTSRVHLIVQVSPKIVEISSDVSINEGNNVSLTCIATGRPEPTVTWRHISPKAVGFVSEDEYLEIQGITREQSGDYECSASNDVAAPVVRRVKVTVNYPPYISEAKGTGVPVGQKGTLQCEASAVPSAEFQWYKDDKRPRRRQRGEQRDAPEGRLRAAAPAPRLAPLPPQVLIRHAGCGPTCTPHRVASVTRRAGLSRSAHRGAPHQGNFWSRPPHVPSIETNAVRREGPGCRGGPAPRLCHYCVCDEMQNQKK
SIO_010081: NTM
subclass of: SO_0000673
so part of: NTM
location: complement(join(1842457..1842703,1842992..1843096,1861516..1861636,1863484..1863618,1946724..1946849,1996022..1996254,2195963..2196047,2407297..2407351))
location: region:1842457-2407351:-1
so has part: feature:2407297-2407351:-1:exon
so has part: feature:2195963-2196047:-1:exon
so has part: feature:1996022-1996254:-1:exon
so has part: feature:1946724-1946849:-1:exon
so has part: feature:1863484-1863618:-1:exon
so has part: feature:1861516-1861636:-1:exon
so has part: feature:1842992-1843096:-1:exon
so has part: feature:1842457-1842703:-1:exon

XP_032328311.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2407297-2407351:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2195963-2196047:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1996022-1996254:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1946724-1946849:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1863484-1863618:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1861516-1861636:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1842992-1843096:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1842457-1842703:-1:exon

NTM
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 419612
gene: NTM
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: neurotrimin isoform X2
translation: MGVCGYLFLPWKCLVVVSLRLLFLVPTGVPVRSGDATFPKAMDNVTVRQGESATLRCSIDNRVTRVAWLNRSTILYAGNDKWCLDPRVVLLSNTQTQYSIEIQNVDVYDEGPYTCSVQTDNHPKTSRVHLIVQVSPKIVEISSDVSINEGNNVSLTCIATGRPEPTVTWRHISPKAVGFVSEDEYLEIQGITREQSGDYECSASNDVAAPVVRRVKVTVNYPPYISEAKGTGVPVGQKGTLQCEASAVPSAEFQWYKDDKRPRRRQRGEQRDAPEGRLRAAAPAPRLAPLPPQVLMHAGCGPTCTPHRVASVTRRAGLSRSAHRGAPHQGNFWSRPPHVPSIETNAVRREGPGCRGGPAPRLCHYCVCDEMQNQKK
SIO_010081: NTM
subclass of: SO_0000673
so part of: NTM
location: complement(join(1842457..1842700,1842992..1843096,1861516..1861636,1863484..1863618,1946724..1946849,1996022..1996254,2195963..2196129))
location: region:1842457-2196129:-1
so has part: feature:2195963-2196129:-1:exon
so has part: feature:1996022-1996254:-1:exon
so has part: feature:1946724-1946849:-1:exon
so has part: feature:1863484-1863618:-1:exon
so has part: feature:1861516-1861636:-1:exon
so has part: feature:1842992-1843096:-1:exon
so has part: feature:1842457-1842700:-1:exon

XP_032328309.1
type: Protein
SIO_000068: ncbiprotein

position:2196129:-1
position: 2196129
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2195963-2196129:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1996022-1996254:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1946724-1946849:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1863484-1863618:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1861516-1861636:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1842992-1843096:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1842457-1842700:-1:exon

NTM
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 419612
gene: NTM
product: neurotrimin, transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 20 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 12 samples with support for all annotated introns
transcript id: XM_032472422.1
SIO_010081: NTM
subclass of: SO_0000673
so part of: NTM
location: complement(join(1842564..1842700,1842992..1843096,1856257..1856408,1861516..1861636,1863484..1863618,1946724..1946849,1996022..1996254,2195963..2196436))
location: region:1842564-2196436:-1
so has part: feature:2195963-2196436:-1:exon
so has part: feature:1996022-1996254:-1:exon
so has part: feature:1946724-1946849:-1:exon
so has part: feature:1863484-1863618:-1:exon
so has part: feature:1861516-1861636:-1:exon
so has part: feature:1856257-1856408:-1:exon
so has part: feature:1842992-1843096:-1:exon
so has part: feature:1842564-1842700:-1:exon

position:1842564:-1
position: 1842564
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2196436:-1
position: 2196436
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2195963-2196436:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1996022-1996254:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1946724-1946849:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1863484-1863618:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1861516-1861636:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1856257-1856408:-1:exon

position:1856257:-1
position: 1856257
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1856408:-1
position: 1856408
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1842992-1843096:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1842564-1842700:-1:exon

NTM
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 419612
gene: NTM
product: neurotrimin, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 20 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 16 samples with support for all annotated introns
transcript id: XM_032472421.1
SIO_010081: NTM
subclass of: SO_0000673
so part of: NTM
location: complement(join(1842566..1842703,1842992..1843096,1856257..1856408,1861516..1861636,1863484..1863618,1946724..1946849,1996022..1996254,2195963..2196436))
location: region:1842566-2196436:-1
so has part: feature:2195963-2196436:-1:exon
so has part: feature:1996022-1996254:-1:exon
so has part: feature:1946724-1946849:-1:exon
so has part: feature:1863484-1863618:-1:exon
so has part: feature:1861516-1861636:-1:exon
so has part: feature:1856257-1856408:-1:exon
so has part: feature:1842992-1843096:-1:exon
so has part: feature:1842566-1842703:-1:exon

position:1842566:-1
position: 1842566
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2195963-2196436:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1996022-1996254:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1946724-1946849:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1863484-1863618:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1861516-1861636:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1856257-1856408:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1842992-1843096:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1842566-1842703:-1:exon

NTM
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 419612
gene: NTM
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: neurotrimin isoform X4
translation: MGVCGYLFLPWKCLVVVSLRLLFLVPTGVPVRSGDATFPKAMDNVTVRQGESATLRCSIDNRVTRVAWLNRSTILYAGNDKWCLDPRVVLLSNTQTQYSIEIQNVDVYDEGPYTCSVQTDNHPKTSRVHLIVQVSPKIVEISSDVSINEGNNVSLTCIATGRPEPTVTWRHISPKAVGFVSEDEYLEIQGITREQSGDYECSASNDVAAPVVRRVKVTVNYPPYISEAKGTGVPVGQKGTLQCEASAVPSAEFQWYKDDKRLVEGRKGVKVENRPFLSKLIFFNVSEHDYGNYTCVASNKLGHTNASITLFGPGAVSEVSNGTPRRAGCARLLPLLVLHLFLLKF
SIO_010081: NTM
subclass of: SO_0000673
so part of: NTM
location: complement(join(1842993..1843096,1856257..1856408,1861516..1861636,1863484..1863618,1946724..1946849,1996022..1996254,2195963..2196129))
location: region:1842993-2196129:-1
so has part: feature:2195963-2196129:-1:exon
so has part: feature:1996022-1996254:-1:exon
so has part: feature:1946724-1946849:-1:exon
so has part: feature:1863484-1863618:-1:exon
so has part: feature:1861516-1861636:-1:exon
so has part: feature:1856257-1856408:-1:exon
so has part: feature:1842993-1843096:-1:exon

XP_032328312.1
type: Protein
SIO_000068: ncbiprotein

position:1842993:-1
position: 1842993
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2195963-2196129:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1996022-1996254:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1946724-1946849:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1863484-1863618:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1861516-1861636:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1856257-1856408:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1842993-1843096:-1:exon

NTM
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 419612
gene: NTM
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: neurotrimin isoform X4
translation: MGVCGYLFLPWKCLVVVSLRLLFLVPTGVPVRSGDATFPKAMDNVTVRQGESATLRCSIDNRVTRVAWLNRSTILYAGNDKWCLDPRVVLLSNTQTQYSIEIQNVDVYDEGPYTCSVQTDNHPKTSRVHLIVQVSPKIVEISSDVSINEGNNVSLTCIATGRPEPTVTWRHISPKAVGFVSEDEYLEIQGITREQSGDYECSASNDVAAPVVRRVKVTVNYPPYISEAKGTGVPVGQKGTLQCEASAVPSAEFQWYKDDKRLVEGRKGVKVENRPFLSKLIFFNVSEHDYGNYTCVASNKLGHTNASITLFGPGAVSEVSNGTPRRAGCARLLPLLVLHLFLLKF
SIO_010081: NTM
subclass of: SO_0000673
so part of: NTM
location: complement(join(1842993..1843096,1856257..1856408,1861516..1861636,1863484..1863618,1946724..1946849,1996022..1996254,2195963..2196129))
location: region:1842993-2196129:-1
so has part: feature:2195963-2196129:-1:exon
so has part: feature:1996022-1996254:-1:exon
so has part: feature:1946724-1946849:-1:exon
so has part: feature:1863484-1863618:-1:exon
so has part: feature:1861516-1861636:-1:exon
so has part: feature:1856257-1856408:-1:exon
so has part: feature:1842993-1843096:-1:exon

XP_032328313.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2195963-2196129:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1996022-1996254:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1946724-1946849:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1863484-1863618:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1861516-1861636:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1856257-1856408:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1842993-1843096:-1:exon

LOC116661227
type: Gene
subclass of: SO_0000704
RO_0002162: 419612
gene: LOC116661227
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: complement(1934906..1935012)
location: region:1934906-1935012:-1
so has part: feature:1934906-1935012:-1:exon
subclass of: SO_0000623

116661227
type: Gene
SIO_000068: ncbigene

position:1934906:-1
position: 1934906
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1935012:-1
position: 1935012
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1934906-1935012:-1:exon

LOC116661227
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 419612
nc RNA class: snRNA
gene: LOC116661227
product: U6 spliceosomal RNA
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00026
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_004317045.1
SIO_010081: LOC116661227
subclass of: SO_0000673
so part of: LOC116661227
location: complement(1934906..1935012)
location: region:1934906-1935012:-1
so has part: feature:1934906-1935012:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1934906-1935012:-1:exon

LOC116661208
type: Gene
subclass of: SO_0000704
RO_0002162: 419612
gene: LOC116661208
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2826714..2876401)
location: region:2826714-2876401:-1
so has part: feature:2826714-2876401:-1:exon
subclass of: SO_0000011

116661208
type: Gene
SIO_000068: ncbigene

position:2826714:-1
position: 2826714
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2876401:-1
position: 2876401
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2826714-2876401:-1:exon

LOC116661208
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 419612
nc RNA class: lncRNA
gene: LOC116661208
product: uncharacterized LOC116661208
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XR_004317027.1
SIO_010081: LOC116661208
subclass of: SO_0000673
so part of: LOC116661208
location: complement(join(2826714..2827610,2828007..2828081,2846151..2846545,2848209..2848405,2854554..2854804,2855236..2855633,2875167..2875362,2876030..2876401))
location: region:2826714-2876401:-1
so has part: feature:2876030-2876401:-1:exon
so has part: feature:2875167-2875362:-1:exon
so has part: feature:2855236-2855633:-1:exon
so has part: feature:2854554-2854804:-1:exon
so has part: feature:2848209-2848405:-1:exon
so has part: feature:2846151-2846545:-1:exon
so has part: feature:2828007-2828081:-1:exon
so has part: feature:2826714-2827610:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2876030-2876401:-1:exon

position:2876030:-1
position: 2876030
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2875167-2875362:-1:exon

position:2875167:-1
position: 2875167
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2875362:-1
position: 2875362
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2855236-2855633:-1:exon

position:2855236:-1
position: 2855236
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2855633:-1
position: 2855633
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2854554-2854804:-1:exon

position:2854554:-1
position: 2854554
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2854804:-1
position: 2854804
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2848209-2848405:-1:exon

position:2848209:-1
position: 2848209
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2848405:-1
position: 2848405
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2846151-2846545:-1:exon

position:2846151:-1
position: 2846151
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2846545:-1
position: 2846545
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:2828007-2828081:-1:exon

position:2828007:-1
position: 2828007
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2828081:-1
position: 2828081
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:2826714-2827610:-1:exon

position:2827610:-1
position: 2827610
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC116661210
type: Gene
subclass of: SO_0000704
RO_0002162: 419612
gene: LOC116661210
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2879130..2882067
location: region:2879130-2882067:1
so has part: feature:2879130-2882067:1:exon
subclass of: SO_0000011

116661210
type: Gene
SIO_000068: ncbigene

position:2879130:1
position: 2879130
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2882067:1
position: 2882067
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2879130-2882067:1:exon

LOC116661210
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 419612
nc RNA class: lncRNA
gene: LOC116661210
product: uncharacterized LOC116661210
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XR_004317028.1
SIO_010081: LOC116661210
subclass of: SO_0000673
so part of: LOC116661210
location: join(2879130..2880344,2881016..2881668,2881798..2882067)
location: region:2879130-2882067:1
so has part: feature:2879130-2880344:1:exon
so has part: feature:2881016-2881668:1:exon
so has part: feature:2881798-2882067:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2879130-2880344:1:exon

position:2880344:1
position: 2880344
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2881016-2881668:1:exon

position:2881016:1
position: 2881016
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2881668:1
position: 2881668
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2881798-2882067:1:exon

position:2881798:1
position: 2881798
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

SNX19
type: Gene
subclass of: SO_0000704
RO_0002162: 419612
gene: SNX19
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2977800..3017715
location: region:2977800-3017715:1
so has part: feature:2977800-3017715:1:exon
subclass of: SO_0000010

102504757
type: Gene
SIO_000068: ncbigene

position:2977800:1
position: 2977800
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3017715:1
position: 3017715
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2977800-3017715:1:exon

SNX19
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 419612
gene: SNX19
product: sorting nexin 19
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: deleted 4 bases in 4 codons; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 18 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 43 samples with support for all annotated introns
transcript id: XM_014556751.2
SIO_010081: SNX19
subclass of: SO_0000673
so part of: SNX19
location: join(2977800..2979938,2981736..2981874,2983032..2983132,2983245..2983364,2985232..2985362,2986519..2986615,2987090..2987271,2989637..2989766,3011533..3011717,3012498..3012585,3013516..3017715)
location: region:2977800-3017715:1
so has part: feature:2977800-2979938:1:exon
so has part: feature:2981736-2981874:1:exon
so has part: feature:2983032-2983132:1:exon
so has part: feature:2983245-2983364:1:exon
so has part: feature:2985232-2985362:1:exon
so has part: feature:2986519-2986615:1:exon
so has part: feature:2987090-2987271:1:exon
so has part: feature:2989637-2989766:1:exon
so has part: feature:3011533-3011717:1:exon
so has part: feature:3012498-3012585:1:exon
so has part: feature:3013516-3017715:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2977800-2979938:1:exon

position:2979938:1
position: 2979938
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2981736-2981874:1:exon

position:2981736:1
position: 2981736
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2981874:1
position: 2981874
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2983032-2983132:1:exon

position:2983032:1
position: 2983032
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2983132:1
position: 2983132
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2983245-2983364:1:exon

position:2983245:1
position: 2983245
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2983364:1
position: 2983364
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2985232-2985362:1:exon

position:2985232:1
position: 2985232
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2985362:1
position: 2985362
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2986519-2986615:1:exon

position:2986519:1
position: 2986519
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2986615:1
position: 2986615
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:2987090-2987271:1:exon

position:2987090:1
position: 2987090
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2987271:1
position: 2987271
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:2989637-2989766:1:exon

position:2989637:1
position: 2989637
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2989766:1
position: 2989766
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:3011533-3011717:1:exon

position:3011533:1
position: 3011533
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3011717:1
position: 3011717
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:3012498-3012585:1:exon

position:3012498:1
position: 3012498
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3012585:1
position: 3012585
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:3013516-3017715:1:exon

position:3013516:1
position: 3013516
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

SNX19
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 419612
gene: SNX19
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: deleted 4 bases in 4 codons; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: sorting nexin-19
translation: MKAEAAASSQEPPTGPDGGVSNLLSSRKLVAVGAVLGWLLVIHLLVNVWLLCLLSALLVVLGGWLGSDAIVGASGRLHLERFIPMATSPPSPEAERQLEQEIDRTIRMIMRDFVSSWYRTVSQEPAFEEEMEAAMRGLVQELRRRMAMVDRHALAQRVLTLCGCHLQSYIQAKEATAGQQSGTVEPSQLWEAYCRVTAPHPAVQSPSAEVTYTRGIVNAVLQGLVPKPHLETRTGRHVVVELITCNVILPLTSKLSDPDWIHLVLVGIFSKARNNPEEVVKPLCPASALEQPSVPTSLPLTVEEQSPPEVRAPSPAAAPLLLNCSEPEGPPHPSPEVEEGCEALEGDLGEVLEERKVGNNSSHFLQPDIRGPLFLCDDTELESPLSELGKETIMLMTPGSFLCDRIQDALCALGGSQSLESKDGERARGIEGAEAEEGPGTEAETGLLVSMLNSCPEIQIDAADKEAEQGDVTSHTTLLASPERTCPSRPSCLEKDLTDGVSSLDPSLPQVLLSSSPPGPLSSATFSFEPLSSPDGPVVIQNLRITGTITAREHSGTGFHPYTLYTVKYETALDGESSGGLQQLAYHTVNRRYREFLNLQTRLEEKSDLRKFIKNVKGPKKLFPDLPFGNMDSDRVEARKSLLESFLKQLCAIPELANSEEVQEFLALNTDARIAFVKKPFVGSRIDKTVVSAIVDTLKTAFPRSEPQSPTEELSEAETENRLQTEGKKASKSRLRFSSSKISPALSISETHEKILYCFREGGVESEILSTSGMESFIEKQTKLLEMQPADAPGKDSEQISEGCVAGHVSDAALPAQDLGSSDPGAETELADTALDLLLLLLMEQWRWLCTENMRKVLHLIFGTLIQRWLEVQVANLTSPRRWVQYLRLLQESVWPGGVLPKCPRPVRTQEQKVAAEKQALQSLMGVLPDVVVEILGVNRCRLGWSLVLESLQQPLIDRHLVYCLWDVILEFLDLSACAEGSPTAASASDPPGKPKKTGVSS
SIO_010081: SNX19
subclass of: SO_0000673
so part of: SNX19
location: join(2978232..2979938,2981736..2981874,2983032..2983132,2983245..2983364,2985232..2985362,2986519..2986615,2987090..2987271,2989637..2989766,3011533..3011717,3012498..3012585,3013516..3013648)
location: region:2978232-3013648:1
so has part: feature:2978232-2979938:1:exon
so has part: feature:2981736-2981874:1:exon
so has part: feature:2983032-2983132:1:exon
so has part: feature:2983245-2983364:1:exon
so has part: feature:2985232-2985362:1:exon
so has part: feature:2986519-2986615:1:exon
so has part: feature:2987090-2987271:1:exon
so has part: feature:2989637-2989766:1:exon
so has part: feature:3011533-3011717:1:exon
so has part: feature:3012498-3012585:1:exon
so has part: feature:3013516-3013648:1:exon

XP_014412237.2
type: Protein
SIO_000068: ncbiprotein

position:2978232:1
position: 2978232
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3013648:1
position: 3013648
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2978232-2979938:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2981736-2981874:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2983032-2983132:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2983245-2983364:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2985232-2985362:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2986519-2986615:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2987090-2987271:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2989637-2989766:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3011533-3011717:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3012498-3012585:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3013516-3013648:1:exon

LOC116661148
type: Gene
subclass of: SO_0000704
RO_0002162: 419612
gene: LOC116661148
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2995780..3006366
location: region:2995780-3006366:1
so has part: feature:2995780-3006366:1:exon
subclass of: SO_0000011

116661148
type: Gene
SIO_000068: ncbigene

position:2995780:1
position: 2995780
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3006366:1
position: 3006366
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2995780-3006366:1:exon

LOC116661148
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 419612
nc RNA class: lncRNA
gene: LOC116661148
product: uncharacterized LOC116661148
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XR_004316918.1
SIO_010081: LOC116661148
subclass of: SO_0000673
so part of: LOC116661148
location: join(2995780..3001228,3001524..3006366)
location: region:2995780-3006366:1
so has part: feature:2995780-3001228:1:exon
so has part: feature:3001524-3006366:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2995780-3001228:1:exon

position:3001228:1
position: 3001228
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3001524-3006366:1:exon

position:3001524:1
position: 3001524
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC106729239
type: Gene
subclass of: SO_0000704
RO_0002162: 419612
gene: LOC106729239
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(3018458..3032610)
location: region:3018458-3032610:-1
so has part: feature:3018458-3032610:-1:exon
subclass of: SO_0000011

106729239
type: Gene
SIO_000068: ncbigene

position:3018458:-1
position: 3018458
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3032610:-1
position: 3032610
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3018458-3032610:-1:exon

LOC106729239
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 419612
nc RNA class: lncRNA
gene: LOC106729239
product: uncharacterized LOC106729239
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XR_001365622.2
SIO_010081: LOC106729239
subclass of: SO_0000673
so part of: LOC106729239
location: complement(join(3018458..3019375,3022486..3022640,3025060..3025268,3031187..3032610))
location: region:3018458-3032610:-1
so has part: feature:3031187-3032610:-1:exon
so has part: feature:3025060-3025268:-1:exon
so has part: feature:3022486-3022640:-1:exon
so has part: feature:3018458-3019375:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3031187-3032610:-1:exon

position:3031187:-1
position: 3031187
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3025060-3025268:-1:exon

position:3025060:-1
position: 3025060
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3025268:-1
position: 3025268
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3022486-3022640:-1:exon

position:3022486:-1
position: 3022486
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3022640:-1
position: 3022640
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3018458-3019375:-1:exon

position:3019375:-1
position: 3019375
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC116661146
type: Gene
subclass of: SO_0000704
RO_0002162: 419612
gene: LOC116661146
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(3032659..3044538)
location: region:3032659-3044538:-1
so has part: feature:3032659-3044538:-1:exon
subclass of: SO_0000011

116661146
type: Gene
SIO_000068: ncbigene

position:3032659:-1
position: 3032659
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3044538:-1
position: 3044538
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3032659-3044538:-1:exon

LOC116661146
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 419612
nc RNA class: lncRNA
gene: LOC116661146
product: uncharacterized LOC116661146, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XR_004316916.1
SIO_010081: LOC116661146
subclass of: SO_0000673
so part of: LOC116661146
location: complement(join(3032659..3033864,3033962..3034981,3035900..3036119,3037957..3038098,3038199..3040604,3040726..3042340,3042467..3044538))
location: region:3032659-3044538:-1
so has part: feature:3042467-3044538:-1:exon
so has part: feature:3040726-3042340:-1:exon
so has part: feature:3038199-3040604:-1:exon
so has part: feature:3037957-3038098:-1:exon
so has part: feature:3035900-3036119:-1:exon
so has part: feature:3033962-3034981:-1:exon
so has part: feature:3032659-3033864:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3042467-3044538:-1:exon

position:3042467:-1
position: 3042467
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3040726-3042340:-1:exon

position:3040726:-1
position: 3040726
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3042340:-1
position: 3042340
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3038199-3040604:-1:exon

position:3038199:-1
position: 3038199
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3040604:-1
position: 3040604
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3037957-3038098:-1:exon

position:3037957:-1
position: 3037957
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3038098:-1
position: 3038098
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:3035900-3036119:-1:exon

position:3035900:-1
position: 3035900
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3036119:-1
position: 3036119
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:3033962-3034981:-1:exon

position:3033962:-1
position: 3033962
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3034981:-1
position: 3034981
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:3032659-3033864:-1:exon

position:3033864:-1
position: 3033864
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC116661146
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 419612
nc RNA class: lncRNA
gene: LOC116661146
product: uncharacterized LOC116661146, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XR_004316915.1
SIO_010081: LOC116661146
subclass of: SO_0000673
so part of: LOC116661146
location: complement(join(3032659..3033864,3033962..3034981,3035900..3036119,3037957..3040604,3040726..3042340,3042467..3044538))
location: region:3032659-3044538:-1
so has part: feature:3042467-3044538:-1:exon
so has part: feature:3040726-3042340:-1:exon
so has part: feature:3037957-3040604:-1:exon
so has part: feature:3035900-3036119:-1:exon
so has part: feature:3033962-3034981:-1:exon
so has part: feature:3032659-3033864:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3042467-3044538:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3040726-3042340:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3037957-3040604:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3035900-3036119:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3033962-3034981:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3032659-3033864:-1:exon

LOC116661145
type: Gene
subclass of: SO_0000704
RO_0002162: 419612
gene: LOC116661145
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(3065422..3290457)
location: region:3065422-3290457:-1
so has part: feature:3065422-3290457:-1:exon
subclass of: SO_0000011

116661145
type: Gene
SIO_000068: ncbigene

position:3065422:-1
position: 3065422
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3290457:-1
position: 3290457
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3065422-3290457:-1:exon

LOC116661145
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 419612
nc RNA class: lncRNA
gene: LOC116661145
product: uncharacterized LOC116661145, transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XR_004316913.1
SIO_010081: LOC116661145
subclass of: SO_0000673
so part of: LOC116661145
location: complement(join(3065422..3065643,3065927..3066105,3066859..3067012,3073088..3073248,3079326..3079451,3079805..3080092,3080397..3080671,3095586..3095716,3107640..3107711,3108442..3108722,3109170..3110705,3119708..3119859,3162058..3162159,3232978..3233346,3290322..3290457))
location: region:3065422-3290457:-1
so has part: feature:3290322-3290457:-1:exon
so has part: feature:3232978-3233346:-1:exon
so has part: feature:3162058-3162159:-1:exon
so has part: feature:3119708-3119859:-1:exon
so has part: feature:3109170-3110705:-1:exon
so has part: feature:3108442-3108722:-1:exon
so has part: feature:3107640-3107711:-1:exon
so has part: feature:3095586-3095716:-1:exon
so has part: feature:3080397-3080671:-1:exon
so has part: feature:3079805-3080092:-1:exon
so has part: feature:3079326-3079451:-1:exon
so has part: feature:3073088-3073248:-1:exon
so has part: feature:3066859-3067012:-1:exon
so has part: feature:3065927-3066105:-1:exon
so has part: feature:3065422-3065643:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3290322-3290457:-1:exon

position:3290322:-1
position: 3290322
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3232978-3233346:-1:exon

position:3232978:-1
position: 3232978
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3233346:-1
position: 3233346
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3162058-3162159:-1:exon

position:3162058:-1
position: 3162058
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3162159:-1
position: 3162159
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3119708-3119859:-1:exon

position:3119708:-1
position: 3119708
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3119859:-1
position: 3119859
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:3109170-3110705:-1:exon

position:3109170:-1
position: 3109170
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3110705:-1
position: 3110705
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:3108442-3108722:-1:exon

position:3108442:-1
position: 3108442
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3108722:-1
position: 3108722
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:3107640-3107711:-1:exon

position:3107640:-1
position: 3107640
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3107711:-1
position: 3107711
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:3095586-3095716:-1:exon

position:3095586:-1
position: 3095586
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3095716:-1
position: 3095716
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:3080397-3080671:-1:exon

position:3080397:-1
position: 3080397
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3080671:-1
position: 3080671
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:3079805-3080092:-1:exon

position:3079805:-1
position: 3079805
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3080092:-1
position: 3080092
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:3079326-3079451:-1:exon

position:3079326:-1
position: 3079326
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3079451:-1
position: 3079451
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:3073088-3073248:-1:exon

position:3073088:-1
position: 3073088
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3073248:-1
position: 3073248
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:3066859-3067012:-1:exon

position:3066859:-1
position: 3066859
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3067012:-1
position: 3067012
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:3065927-3066105:-1:exon

position:3065927:-1
position: 3065927
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3066105:-1
position: 3066105
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:3065422-3065643:-1:exon

position:3065643:-1
position: 3065643
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC116661145
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 419612
nc RNA class: lncRNA
gene: LOC116661145
product: uncharacterized LOC116661145, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XR_004316911.1
SIO_010081: LOC116661145
subclass of: SO_0000673
so part of: LOC116661145
location: complement(join(3065422..3065643,3065927..3066105,3066859..3067012,3073088..3073248,3079326..3079451,3079941..3080092,3080397..3080671,3095586..3095716,3107640..3107711,3108442..3110705,3119708..3119859,3162058..3162159,3232978..3233346,3290322..3290457))
location: region:3065422-3290457:-1
so has part: feature:3290322-3290457:-1:exon
so has part: feature:3232978-3233346:-1:exon
so has part: feature:3162058-3162159:-1:exon
so has part: feature:3119708-3119859:-1:exon
so has part: feature:3108442-3110705:-1:exon
so has part: feature:3107640-3107711:-1:exon
so has part: feature:3095586-3095716:-1:exon
so has part: feature:3080397-3080671:-1:exon
so has part: feature:3079941-3080092:-1:exon
so has part: feature:3079326-3079451:-1:exon
so has part: feature:3073088-3073248:-1:exon
so has part: feature:3066859-3067012:-1:exon
so has part: feature:3065927-3066105:-1:exon
so has part: feature:3065422-3065643:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3290322-3290457:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3232978-3233346:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3162058-3162159:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3119708-3119859:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3108442-3110705:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3107640-3107711:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3095586-3095716:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3080397-3080671:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3079941-3080092:-1:exon

position:3079941:-1
position: 3079941
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:3079326-3079451:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3073088-3073248:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3066859-3067012:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3065927-3066105:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:3065422-3065643:-1:exon

LOC116661145
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 419612
nc RNA class: lncRNA
gene: LOC116661145
product: uncharacterized LOC116661145, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XR_004316910.1
SIO_010081: LOC116661145
subclass of: SO_0000673
so part of: LOC116661145
location: complement(join(3065422..3065643,3065927..3066105,3066863..3067012,3073088..3073248,3079326..3079451,3079805..3080092,3080397..3080671,3095586..3095716,3107640..3107711,3108442..3110705,3119708..3119859,3162058..3162159,3232978..3233346,3290322..3290457))
location: region:3065422-3290457:-1
so has part: feature:3290322-3290457:-1:exon
so has part: feature:3232978-3233346:-1:exon
so has part: feature:3162058-3162159:-1:exon
so has part: feature:3119708-3119859:-1:exon
so has part: feature:3108442-3110705:-1:exon
so has part: feature:3107640-3107711:-1:exon
so has part: feature:3095586-3095716:-1:exon
so has part: feature:3080397-3080671:-1:exon
so has part: feature:3079805-3080092:-1:exon
so has part: feature:3079326-3079451:-1:exon
so has part: feature:3073088-3073248:-1:exon
so has part: feature:3066863-3067012:-1:exon
so has part: feature:3065927-3066105:-1:exon
so has part: feature:3065422-3065643:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3290322-3290457:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3232978-3233346:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3162058-3162159:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3119708-3119859:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3108442-3110705:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3107640-3107711:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3095586-3095716:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3080397-3080671:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3079805-3080092:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3079326-3079451:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3073088-3073248:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3066863-3067012:-1:exon

position:3066863:-1
position: 3066863
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:3065927-3066105:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:3065422-3065643:-1:exon

LOC116661145
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 419612
nc RNA class: lncRNA
gene: LOC116661145
product: uncharacterized LOC116661145, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XR_004316908.1
SIO_010081: LOC116661145
subclass of: SO_0000673
so part of: LOC116661145
location: complement(join(3065422..3065643,3065927..3066105,3066859..3067012,3073088..3073248,3079326..3079451,3079805..3080092,3080397..3080671,3095586..3095716,3107640..3107711,3108442..3110705,3119708..3119859,3162058..3162159,3232978..3233346,3290322..3290457))
location: region:3065422-3290457:-1
so has part: feature:3290322-3290457:-1:exon
so has part: feature:3232978-3233346:-1:exon
so has part: feature:3162058-3162159:-1:exon
so has part: feature:3119708-3119859:-1:exon
so has part: feature:3108442-3110705:-1:exon
so has part: feature:3107640-3107711:-1:exon
so has part: feature:3095586-3095716:-1:exon
so has part: feature:3080397-3080671:-1:exon
so has part: feature:3079805-3080092:-1:exon
so has part: feature:3079326-3079451:-1:exon
so has part: feature:3073088-3073248:-1:exon
so has part: feature:3066859-3067012:-1:exon
so has part: feature:3065927-3066105:-1:exon
so has part: feature:3065422-3065643:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3290322-3290457:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3232978-3233346:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3162058-3162159:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3119708-3119859:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3108442-3110705:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3107640-3107711:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3095586-3095716:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3080397-3080671:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3079805-3080092:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3079326-3079451:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3073088-3073248:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3066859-3067012:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3065927-3066105:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:3065422-3065643:-1:exon

LOC116661145
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 419612
nc RNA class: lncRNA
gene: LOC116661145
product: uncharacterized LOC116661145, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XR_004316909.1
SIO_010081: LOC116661145
subclass of: SO_0000673
so part of: LOC116661145
location: complement(join(3065422..3065643,3065927..3066105,3066859..3067012,3073088..3073248,3079326..3079451,3079805..3080092,3080397..3080671,3095586..3095716,3107640..3107711,3108442..3110705,3119708..3119859,3162058..3162159,3232978..3233346,3234331..3234456))
location: region:3065422-3234456:-1
so has part: feature:3234331-3234456:-1:exon
so has part: feature:3232978-3233346:-1:exon
so has part: feature:3162058-3162159:-1:exon
so has part: feature:3119708-3119859:-1:exon
so has part: feature:3108442-3110705:-1:exon
so has part: feature:3107640-3107711:-1:exon
so has part: feature:3095586-3095716:-1:exon
so has part: feature:3080397-3080671:-1:exon
so has part: feature:3079805-3080092:-1:exon
so has part: feature:3079326-3079451:-1:exon
so has part: feature:3073088-3073248:-1:exon
so has part: feature:3066859-3067012:-1:exon
so has part: feature:3065927-3066105:-1:exon
so has part: feature:3065422-3065643:-1:exon

position:3234456:-1
position: 3234456
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3234331-3234456:-1:exon

position:3234331:-1
position: 3234331
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3232978-3233346:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3162058-3162159:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3119708-3119859:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3108442-3110705:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3107640-3107711:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3095586-3095716:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3080397-3080671:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3079805-3080092:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3079326-3079451:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3073088-3073248:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3066859-3067012:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3065927-3066105:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:3065422-3065643:-1:exon

LOC116661145
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 419612
nc RNA class: lncRNA
gene: LOC116661145
product: uncharacterized LOC116661145, transcript variant X7
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XR_004316914.1
SIO_010081: LOC116661145
subclass of: SO_0000673
so part of: LOC116661145
location: complement(join(3065422..3065643,3065927..3066105,3066859..3067012,3073088..3073248,3079326..3079451,3079805..3080092,3080397..3080671,3095586..3095716,3107640..3107711,3108442..3110705,3119708..3119859,3140092..3140205))
location: region:3065422-3140205:-1
so has part: feature:3140092-3140205:-1:exon
so has part: feature:3119708-3119859:-1:exon
so has part: feature:3108442-3110705:-1:exon
so has part: feature:3107640-3107711:-1:exon
so has part: feature:3095586-3095716:-1:exon
so has part: feature:3080397-3080671:-1:exon
so has part: feature:3079805-3080092:-1:exon
so has part: feature:3079326-3079451:-1:exon
so has part: feature:3073088-3073248:-1:exon
so has part: feature:3066859-3067012:-1:exon
so has part: feature:3065927-3066105:-1:exon
so has part: feature:3065422-3065643:-1:exon

position:3140205:-1
position: 3140205
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3140092-3140205:-1:exon

position:3140092:-1
position: 3140092
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3119708-3119859:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3108442-3110705:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3107640-3107711:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3095586-3095716:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3080397-3080671:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3079805-3080092:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3079326-3079451:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3073088-3073248:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3066859-3067012:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3065927-3066105:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3065422-3065643:-1:exon

LOC116661145
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 419612
nc RNA class: lncRNA
gene: LOC116661145
product: uncharacterized LOC116661145, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XR_004316912.1
SIO_010081: LOC116661145
subclass of: SO_0000673
so part of: LOC116661145
location: complement(join(3065422..3065643,3065927..3066105,3066859..3067012,3073088..3073248,3079326..3079451,3079805..3080092,3080397..3080671,3095586..3095716,3107640..3107711,3108442..3110705,3119708..3119859,3120826..3121003))
location: region:3065422-3121003:-1
so has part: feature:3120826-3121003:-1:exon
so has part: feature:3119708-3119859:-1:exon
so has part: feature:3108442-3110705:-1:exon
so has part: feature:3107640-3107711:-1:exon
so has part: feature:3095586-3095716:-1:exon
so has part: feature:3080397-3080671:-1:exon
so has part: feature:3079805-3080092:-1:exon
so has part: feature:3079326-3079451:-1:exon
so has part: feature:3073088-3073248:-1:exon
so has part: feature:3066859-3067012:-1:exon
so has part: feature:3065927-3066105:-1:exon
so has part: feature:3065422-3065643:-1:exon

position:3121003:-1
position: 3121003
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3120826-3121003:-1:exon

position:3120826:-1
position: 3120826
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3119708-3119859:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3108442-3110705:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3107640-3107711:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3095586-3095716:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3080397-3080671:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3079805-3080092:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3079326-3079451:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3073088-3073248:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3066859-3067012:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3065927-3066105:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3065422-3065643:-1:exon

TRNAG-ACC
type: Gene
subclass of: SO_0000704
RO_0002162: 419612
gene: TRNAG-ACC
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
so part of: sequence
location: 3200655..3200726
location: region:3200655-3200726:1
so has part: feature:3200655-3200726:1:exon
subclass of: SO_0000663

116661234
type: Gene
SIO_000068: ncbigene

position:3200655:1
position: 3200655
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3200726:1
position: 3200726
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3200655-3200726:1:exon

TRNAG-ACC
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 419612
gene: TRNAG-ACC
product: tRNA-Gly
inference: COORDINATES: profile:tRNAscan-SE:1.23
note: transfer RNA glycine (anticodon ACC); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:3200687..3200689,aa:Gly,seq:acc)
SIO_010081: TRNAG-ACC
subclass of: SO_0000673
so part of: TRNAG-ACC
location: 3200655..3200726
location: region:3200655-3200726:1
so has part: feature:3200655-3200726:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3200655-3200726:1:exon

LOC116661147
type: Gene
subclass of: SO_0000704
RO_0002162: 419612
gene: LOC116661147
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 3230336..3236284
location: region:3230336-3236284:1
so has part: feature:3230336-3236284:1:exon
subclass of: SO_0000011

116661147
type: Gene
SIO_000068: ncbigene

position:3230336:1
position: 3230336
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3236284:1
position: 3236284
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3230336-3236284:1:exon

LOC116661147
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 419612
nc RNA class: lncRNA
gene: LOC116661147
product: uncharacterized LOC116661147
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XR_004316917.1
SIO_010081: LOC116661147
subclass of: SO_0000673
so part of: LOC116661147
location: join(3230336..3230555,3233851..3236284)
location: region:3230336-3236284:1
so has part: feature:3230336-3230555:1:exon
so has part: feature:3233851-3236284:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3230336-3230555:1:exon

position:3230555:1
position: 3230555
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3233851-3236284:1:exon

position:3233851:1
position: 3233851
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

TRNAG-UCC
type: Gene
subclass of: SO_0000704
RO_0002162: 419612
gene: TRNAG-UCC
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
so part of: sequence
location: 3276454..3276525
location: region:3276454-3276525:1
so has part: feature:3276454-3276525:1:exon
subclass of: SO_0000663

116661244
type: Gene
SIO_000068: ncbigene

position:3276454:1
position: 3276454
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3276525:1
position: 3276525
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3276454-3276525:1:exon

TRNAG-UCC
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 419612
gene: TRNAG-UCC
product: tRNA-Gly
inference: COORDINATES: profile:tRNAscan-SE:1.23
note: transfer RNA glycine (anticodon UCC); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:3276486..3276488,aa:Gly,seq:tcc)
SIO_010081: TRNAG-UCC
subclass of: SO_0000673
so part of: TRNAG-UCC
location: 3276454..3276525
location: region:3276454-3276525:1
so has part: feature:3276454-3276525:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3276454-3276525:1:exon

LOC116661205
type: Gene
subclass of: SO_0000704
RO_0002162: 419612
gene: LOC116661205
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 3310807..3313931
location: region:3310807-3313931:1
so has part: feature:3310807-3313931:1:exon
subclass of: SO_0000011

116661205
type: Gene
SIO_000068: ncbigene

position:3310807:1
position: 3310807
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3313931:1
position: 3313931
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3310807-3313931:1:exon

LOC116661205
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 419612
nc RNA class: lncRNA
gene: LOC116661205
product: uncharacterized LOC116661205
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XR_004317023.1
SIO_010081: LOC116661205
subclass of: SO_0000673
so part of: LOC116661205
location: join(3310807..3311127,3312490..3313931)
location: region:3310807-3313931:1
so has part: feature:3310807-3311127:1:exon
so has part: feature:3312490-3313931:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3310807-3311127:1:exon

position:3311127:1
position: 3311127
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3312490-3313931:1:exon

position:3312490:1
position: 3312490
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

ADAMTS15
type: Gene
subclass of: SO_0000704
RO_0002162: 419612
gene: ADAMTS15
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(3325473..3346621)
location: region:3325473-3346621:-1
so has part: feature:3325473-3346621:-1:exon
subclass of: SO_0000010

102504498
type: Gene
SIO_000068: ncbigene

position:3325473:-1
position: 3325473
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3346621:-1
position: 3346621
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3325473-3346621:-1:exon

ADAMTS15
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 419612
gene: ADAMTS15
product: ADAM metallopeptidase with thrombospondin type 1 motif 15
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 32 samples with support for all annotated introns
transcript id: XM_014556749.2
SIO_010081: ADAMTS15
subclass of: SO_0000673
so part of: ADAMTS15
location: complement(join(3325473..3328931,3330406..3330581,3330749..3330930,3331935..3332112,3334456..3334739,3334945..3335112,3335552..3335684,3345321..3346621))
location: region:3325473-3346621:-1
so has part: feature:3345321-3346621:-1:exon
so has part: feature:3335552-3335684:-1:exon
so has part: feature:3334945-3335112:-1:exon
so has part: feature:3334456-3334739:-1:exon
so has part: feature:3331935-3332112:-1:exon
so has part: feature:3330749-3330930:-1:exon
so has part: feature:3330406-3330581:-1:exon
so has part: feature:3325473-3328931:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3345321-3346621:-1:exon

position:3345321:-1
position: 3345321
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3335552-3335684:-1:exon

position:3335552:-1
position: 3335552
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3335684:-1
position: 3335684
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3334945-3335112:-1:exon

position:3334945:-1
position: 3334945
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3335112:-1
position: 3335112
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3334456-3334739:-1:exon

position:3334456:-1
position: 3334456
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3334739:-1
position: 3334739
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:3331935-3332112:-1:exon

position:3331935:-1
position: 3331935
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3332112:-1
position: 3332112
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:3330749-3330930:-1:exon

position:3330749:-1
position: 3330749
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3330930:-1
position: 3330930
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:3330406-3330581:-1:exon

position:3330406:-1
position: 3330406
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3330581:-1
position: 3330581
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:3325473-3328931:-1:exon

position:3328931:-1
position: 3328931
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

ADAMTS15
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 419612
gene: ADAMTS15
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: A disintegrin and metalloproteinase with thrombospondin motifs 15
translation: MLLLGILTLALAGALAGGSEPEQEVVVPIRLDPDINGRHYYWRGPEDSEDQGLIFQITAFQEDFYLHLTPDAQFLAPAFATEHLGVPLQGLIESSPDLRRCFYSGDVNSEPDSFAAVSLCGGLRGAFGYRGAEYVISPLPNASAPAAQRNSQGAHLLQRRGTPGGPPGDPTSRCGVASGWNPAILRALDPYKPRRNSLGEGHSHRRSGRAKRFVSIPRYVETLVVADESMVKFHGADLEHYLLTLLATAARLYRHPSILNPISIVVVKVLLLGDRDTGPKVTGNAALTLRNFCAWQKKLNEVSDKHPEYWDTAILFTRQDLCGATTCDTLGMADVGTMCDPKRSCSVIEDDGLPSAFTTAHELGHVFNMPHDNVKVCEEVFGKLRANHMMSPTLIQIDRANPWSACSAAIITDFLDSGHGDCLLDQPSKPIALPEDLPGASYTLSQQCELAFGVGSKPCPYMQYCTKLWCTGKARGQMVCQTRHFPWADGTGCGEGKFCLKGACVERHDLHRYRVDGSWAKWEPYGPCSRTCGGGVQLARRQCSNPAPANGGKYCEGVRVKYRSCNLEPCPSSASGKSFREEQCEAFNGYNHSTNRLALTVAWVPKYSGVSPRDKCKLICRANGTGYFYVLAPKVVDGTLCTPDSTSVCVQGKCIKAGCDGNLGSKKKFDKCGVCGGDNKGCKKVSGLFTKPMHGYNFVVAIPAGASSIDIRQRGYKGLIGDDNYLALKNSQGKYLLNGHFVVSAVERDLVVKGSLLRYSGTGTAVESLQASRPILEPLTVEVLSVGKMTPPRVRYSFYLPKEPREDRLSPPKDPRAPSVLHNSVLSLSNQVEQPDARPSARWVAGSWGPCSASCGGGLQRRPVDCRGSPGPRRASVCDAAHRPAETRACGEPCPAWELGAWSPCSKSCGRGFKRRPLKCVGHRGRLLARDQCDLRRKPQELDFCMLRPC
SIO_010081: ADAMTS15
subclass of: SO_0000673
so part of: ADAMTS15
location: complement(join(3328157..3328931,3330406..3330581,3330749..3330930,3331935..3332112,3334456..3334739,3334945..3335112,3335552..3335684,3345321..3346277))
location: region:3328157-3346277:-1
so has part: feature:3345321-3346277:-1:exon
so has part: feature:3335552-3335684:-1:exon
so has part: feature:3334945-3335112:-1:exon
so has part: feature:3334456-3334739:-1:exon
so has part: feature:3331935-3332112:-1:exon
so has part: feature:3330749-3330930:-1:exon
so has part: feature:3330406-3330581:-1:exon
so has part: feature:3328157-3328931:-1:exon

XP_014412235.2
type: Protein
SIO_000068: ncbiprotein

position:3328157:-1
position: 3328157
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3346277:-1
position: 3346277
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3345321-3346277:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3335552-3335684:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3334945-3335112:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3334456-3334739:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3331935-3332112:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3330749-3330930:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3330406-3330581:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3328157-3328931:-1:exon

ADAMTS8
type: Gene
subclass of: SO_0000704
RO_0002162: 419612
gene: ADAMTS8
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 3363861..3382755
location: region:3363861-3382755:1
so has part: feature:3363861-3382755:1:exon
subclass of: SO_0000010

102504247
type: Gene
SIO_000068: ncbigene

position:3363861:1
position: 3363861
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3382755:1
position: 3382755
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3363861-3382755:1:exon

ADAMTS8
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 419612
gene: ADAMTS8
product: ADAM metallopeptidase with thrombospondin type 1 motif 8
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 14 samples with support for all annotated introns
transcript id: XM_032472529.1
SIO_010081: ADAMTS8
subclass of: SO_0000673
so part of: ADAMTS8
location: join(3363861..3364770,3371970..3372209,3372874..3373009,3373550..3373717,3374579..3374880,3376932..3377115,3379402..3379574,3379701..3379876,3381647..3382755)
location: region:3363861-3382755:1
so has part: feature:3363861-3364770:1:exon
so has part: feature:3371970-3372209:1:exon
so has part: feature:3372874-3373009:1:exon
so has part: feature:3373550-3373717:1:exon
so has part: feature:3374579-3374880:1:exon
so has part: feature:3376932-3377115:1:exon
so has part: feature:3379402-3379574:1:exon
so has part: feature:3379701-3379876:1:exon
so has part: feature:3381647-3382755:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3363861-3364770:1:exon

position:3364770:1
position: 3364770
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3371970-3372209:1:exon

position:3371970:1
position: 3371970
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3372209:1
position: 3372209
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3372874-3373009:1:exon

position:3372874:1
position: 3372874
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3373009:1
position: 3373009
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3373550-3373717:1:exon

position:3373550:1
position: 3373550
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3373717:1
position: 3373717
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:3374579-3374880:1:exon

position:3374579:1
position: 3374579
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3374880:1
position: 3374880
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:3376932-3377115:1:exon

position:3376932:1
position: 3376932
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3377115:1
position: 3377115
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:3379402-3379574:1:exon

position:3379402:1
position: 3379402
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3379574:1
position: 3379574
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:3379701-3379876:1:exon

position:3379701:1
position: 3379701
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3379876:1
position: 3379876
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:3381647-3382755:1:exon

position:3381647:1
position: 3381647
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

ADAMTS8
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 419612
gene: ADAMTS8
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: A disintegrin and metalloproteinase with thrombospondin motifs 8
translation: MPRAAPRWPPLLLLLPLLLLPPPPPPLARGAPARPGGGGPASALVVPTQLPSGAGELALHLSAFGQGFVLRLAPDASFLAPEFKIERLGGSGGAAGGERELRGCFFSGTVNGEPESLAAFSLCRGLSGSFLLDGEEFTIQPQGAGDSLHQPHRLQRWGPGRAAAEAQPLPGAPEWEVEKGEGQRQESGAHAHEEDEDEESKEEEAEGASELPPTLGATSRTKRFVSEARFVETLLVADASMARFYGADLQNHILTLMSVAARVYKHPSIRNSINLMVVKVLIVEDEYWGPMVSDNGGLTLRNFCSWQQHFNQPSDRHPEHFDTAILLTRLNFCGMRGMCDTLGVADIGTICDPSKSCSVIKDEGLQAAYTLAHELGHVLSMPHDDSNPCVRLFGPLGKHHMMTPLFVHLNKTLPWSPCSAMYLTELLDSGHGDCLLDAPTSALTLPTDLPGRRALYNLDEQCRQIFGLGFRHCPNTSPQDICAQLWCHVFGTEFLCHTKNGSLPWADGTPCGPGRLCWDGSCLPAEEVEKPKIVVDGGWAPWGPWGECSRTCGGGVQFSHRECKNPEPQNGGRYCLGRRTKYQSCRTEECPPDGKSFREQQCEKYNAYNYTDMDGNLLQWVPKYAGVSPQDRCKLFCRARGRSEFKVFEAKVIDGTLCGPETLAICVRGQCVKAGCDHVLGSPRKLDRCGVCGGEGNSCRKVSGFFNPSRYGYNDIVTIPAGATNIDVKQWSRPGVQNDGNYLALKTADGQYLLNGNLAISAIEQDILVKGTILKYSGSIATLERLQSFQPLPEPLTVQLLTVPGEVFPPRVKYTFYVPNDVNFSIQSGKERTTTNVIQPLLNVQWVLGDWSECSSSCGAGWQRRTVECLDPSGQASATCDEALKPEDAKPCGSQPCSP
SIO_010081: ADAMTS8
subclass of: SO_0000673
so part of: ADAMTS8
location: join(3364021..3364770,3371970..3372209,3372874..3373009,3373550..3373717,3374579..3374880,3376932..3377115,3379402..3379574,3379701..3379876,3381647..3382217)
location: region:3364021-3382217:1
so has part: feature:3364021-3364770:1:exon
so has part: feature:3371970-3372209:1:exon
so has part: feature:3372874-3373009:1:exon
so has part: feature:3373550-3373717:1:exon
so has part: feature:3374579-3374880:1:exon
so has part: feature:3376932-3377115:1:exon
so has part: feature:3379402-3379574:1:exon
so has part: feature:3379701-3379876:1:exon
so has part: feature:3381647-3382217:1:exon

XP_032328420.1
type: Protein
SIO_000068: ncbiprotein

position:3364021:1
position: 3364021
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3382217:1
position: 3382217
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3364021-3364770:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3371970-3372209:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3372874-3373009:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3373550-3373717:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3374579-3374880:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3376932-3377115:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3379402-3379574:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3379701-3379876:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3381647-3382217:1:exon

ZBTB44
type: Gene
subclass of: SO_0000704
RO_0002162: 419612
gene: ZBTB44
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 3439348..3484324
location: region:3439348-3484324:1
so has part: feature:3439348-3484324:1:exon
subclass of: SO_0000010

102523659
type: Gene
SIO_000068: ncbigene

position:3439348:1
position: 3439348
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3484324:1
position: 3484324
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3439348-3484324:1:exon

ZBTB44
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 419612
gene: ZBTB44
product: zinc finger and BTB domain containing 44, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 23 samples with support for all annotated introns
transcript id: XM_032472530.1
SIO_010081: ZBTB44
subclass of: SO_0000673
so part of: ZBTB44
location: join(3439348..3439483,3458789..3459862,3471024..3471138,3473478..3473641,3475015..3475315,3477044..3484324)
location: region:3439348-3484324:1
so has part: feature:3439348-3439483:1:exon
so has part: feature:3458789-3459862:1:exon
so has part: feature:3471024-3471138:1:exon
so has part: feature:3473478-3473641:1:exon
so has part: feature:3475015-3475315:1:exon
so has part: feature:3477044-3484324:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3439348-3439483:1:exon

position:3439483:1
position: 3439483
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3458789-3459862:1:exon

position:3458789:1
position: 3458789
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3459862:1
position: 3459862
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3471024-3471138:1:exon

position:3471024:1
position: 3471024
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3471138:1
position: 3471138
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3473478-3473641:1:exon

position:3473478:1
position: 3473478
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3473641:1
position: 3473641
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:3475015-3475315:1:exon

position:3475015:1
position: 3475015
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3475315:1
position: 3475315
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:3477044-3484324:1:exon

position:3477044:1
position: 3477044
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

ZBTB44
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 419612
gene: ZBTB44
product: zinc finger and BTB domain containing 44, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 12 samples with support for all annotated introns
transcript id: XR_004316936.1
SIO_010081: ZBTB44
so part of: ZBTB44
location: join(3439348..3439483,3458789..3459862,3471024..3471138,3473478..3473641,3475015..3475315,3477044..3479184,3481413..3484324)
location: region:3439348-3484324:1
so has part: feature:3439348-3439483:1:exon
so has part: feature:3458789-3459862:1:exon
so has part: feature:3471024-3471138:1:exon
so has part: feature:3473478-3473641:1:exon
so has part: feature:3475015-3475315:1:exon
so has part: feature:3477044-3479184:1:exon
so has part: feature:3481413-3484324:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3439348-3439483:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3458789-3459862:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3471024-3471138:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3473478-3473641:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3475015-3475315:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3477044-3479184:1:exon

position:3479184:1
position: 3479184
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:3481413-3484324:1:exon

position:3481413:1
position: 3481413
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

ZBTB44
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 419612
gene: ZBTB44
product: zinc finger and BTB domain containing 44, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 43 samples with support for all annotated introns
transcript id: XM_032472531.1
SIO_010081: ZBTB44
subclass of: SO_0000673
so part of: ZBTB44
location: join(3439348..3439483,3458789..3459862,3471024..3471108,3473478..3473641,3475015..3475315,3477044..3484324)
location: region:3439348-3484324:1
so has part: feature:3439348-3439483:1:exon
so has part: feature:3458789-3459862:1:exon
so has part: feature:3471024-3471108:1:exon
so has part: feature:3473478-3473641:1:exon
so has part: feature:3475015-3475315:1:exon
so has part: feature:3477044-3484324:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3439348-3439483:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3458789-3459862:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3471024-3471108:1:exon

position:3471108:1
position: 3471108
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3473478-3473641:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3475015-3475315:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3477044-3484324:1:exon

ZBTB44
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 419612
gene: ZBTB44
product: zinc finger and BTB domain containing 44, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 32 samples with support for all annotated introns
transcript id: XM_032472532.1
SIO_010081: ZBTB44
subclass of: SO_0000673
so part of: ZBTB44
location: join(3439348..3439483,3458789..3459862,3471024..3471108,3473529..3473641,3475015..3475315,3477044..3484324)
location: region:3439348-3484324:1
so has part: feature:3439348-3439483:1:exon
so has part: feature:3458789-3459862:1:exon
so has part: feature:3471024-3471108:1:exon
so has part: feature:3473529-3473641:1:exon
so has part: feature:3475015-3475315:1:exon
so has part: feature:3477044-3484324:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3439348-3439483:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3458789-3459862:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3471024-3471108:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3473529-3473641:1:exon

position:3473529:1
position: 3473529
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:3475015-3475315:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3477044-3484324:1:exon

ZBTB44
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 419612
gene: ZBTB44
product: zinc finger and BTB domain containing 44, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 39 samples with support for all annotated introns
transcript id: XM_032472533.1
SIO_010081: ZBTB44
subclass of: SO_0000673
so part of: ZBTB44
location: join(3439348..3439483,3458789..3459862,3471024..3471108,3473532..3473641,3475015..3475315,3477044..3484324)
location: region:3439348-3484324:1
so has part: feature:3439348-3439483:1:exon
so has part: feature:3458789-3459862:1:exon
so has part: feature:3471024-3471108:1:exon
so has part: feature:3473532-3473641:1:exon
so has part: feature:3475015-3475315:1:exon
so has part: feature:3477044-3484324:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3439348-3439483:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3458789-3459862:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3471024-3471108:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3473532-3473641:1:exon

position:3473532:1
position: 3473532
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:3475015-3475315:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3477044-3484324:1:exon

ZBTB44
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 419612
gene: ZBTB44
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger and BTB domain-containing protein 44 isoform X1
translation: MGVKTFTHSSSSHSQEMLGKLNMLRNDGHFCDITIRVQDKVFRAHKVVLAACSDFFRTKLVGQAEDDNKNVLDLHHVTVTGFIPLLEYAYTATLSINTENIIDVLAAASYMQMFSVASTCSEFMKSSILWNTPNSQPEKSLDAGQENNSNCNFTSRDGSISPVSSECSVVERTIPVCRESRRKRKSYIVMSPESPVKCSTQTSSPQVLNSSAPYSENRNQPVDSSLAFPWTFPFGIDRRIQPDKVKPAENTRTLELPGPSETGRRMAEYVTCESTKTTLPLGTEEDVRVKVERLSDEEVHEEVSQPVSASQSSLSDQQTVPGSEQVQEDLLISPQSSSIGSVDEGVTEGLPTLQSTSSTNAHTEDDDRLVLKQHVVFLLENAQYPYQLYIAPPTSSTERPGPNGPDRPFQCPTCGVRFTRIQNLKQHMLIHSGIKPFQCDRCGKKFTRAYSLKMHRLKHEGKRCFRCQICSATFTSFGEYKHHMRVSRHIIRKPRIYECKTCGAMFTNSGNLIVHLRSLNHEASELANYFQSSDFLVPDYLNQEPEDTLVQYDLGEHSFESSSSVQMPVISQVSSTQNCESSFPLGSLGELAEKEEEMPDQPKTSVCAEATRDDPPKSELSSITIE
SIO_010081: ZBTB44
subclass of: SO_0000673
so part of: ZBTB44
location: join(3458845..3459862,3471024..3471138,3473478..3473641,3475015..3475315,3477044..3477326)
location: region:3458845-3477326:1
so has part: feature:3458845-3459862:1:exon
so has part: feature:3471024-3471138:1:exon
so has part: feature:3473478-3473641:1:exon
so has part: feature:3475015-3475315:1:exon
so has part: feature:3477044-3477326:1:exon

XP_032328421.1
type: Protein
SIO_000068: ncbiprotein

position:3458845:1
position: 3458845
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3477326:1
position: 3477326
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3458845-3459862:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3471024-3471138:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3473478-3473641:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3475015-3475315:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3477044-3477326:1:exon

ZBTB44
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 419612
gene: ZBTB44
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger and BTB domain-containing protein 44 isoform X2
translation: MGVKTFTHSSSSHSQEMLGKLNMLRNDGHFCDITIRVQDKVFRAHKVVLAACSDFFRTKLVGQAEDDNKNVLDLHHVTVTGFIPLLEYAYTATLSINTENIIDVLAAASYMQMFSVASTCSEFMKSSILWNTPNSQPEKSLDAGQENNSNCNFTSRDGSISPVSSECSVVERTIPVCRESRRKRKSYIVMSPESPVKCSTQTSSPQVLNSSAPYSENRNQPVDSSLAFPWTFPFGIDRRIQPDKVKPAENTRTLELPGPSETGRRMAEYVTCESTKTTLPLGTEEDVRVKVERLSDEEVHEEVSQPVSASQSSLSDQQTVPGSEQVQEDLLISPQSSSIGSVDEGVTEGLPTLQSTSSTNAHTEDDDRLENAQYPYQLYIAPPTSSTERPGPNGPDRPFQCPTCGVRFTRIQNLKQHMLIHSGIKPFQCDRCGKKFTRAYSLKMHRLKHEGKRCFRCQICSATFTSFGEYKHHMRVSRHIIRKPRIYECKTCGAMFTNSGNLIVHLRSLNHEASELANYFQSSDFLVPDYLNQEPEDTLVQYDLGEHSFESSSSVQMPVISQVSSTQNCESSFPLGSLGELAEKEEEMPDQPKTSVCAEATRDDPPKSELSSITIE
SIO_010081: ZBTB44
subclass of: SO_0000673
so part of: ZBTB44
location: join(3458845..3459862,3471024..3471108,3473478..3473641,3475015..3475315,3477044..3477326)
location: region:3458845-3477326:1
so has part: feature:3458845-3459862:1:exon
so has part: feature:3471024-3471108:1:exon
so has part: feature:3473478-3473641:1:exon
so has part: feature:3475015-3475315:1:exon
so has part: feature:3477044-3477326:1:exon

XP_032328422.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3458845-3459862:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3471024-3471108:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3473478-3473641:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3475015-3475315:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3477044-3477326:1:exon

ZBTB44
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 419612
gene: ZBTB44
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger and BTB domain-containing protein 44 isoform X3
translation: MGVKTFTHSSSSHSQEMLGKLNMLRNDGHFCDITIRVQDKVFRAHKVVLAACSDFFRTKLVGQAEDDNKNVLDLHHVTVTGFIPLLEYAYTATLSINTENIIDVLAAASYMQMFSVASTCSEFMKSSILWNTPNSQPEKSLDAGQENNSNCNFTSRDGSISPVSSECSVVERTIPVCRESRRKRKSYIVMSPESPVKCSTQTSSPQVLNSSAPYSENRNQPVDSSLAFPWTFPFGIDRRIQPDKVKPAENTRTLELPGPSETGRRMAEYVTCESTKTTLPLGTEEDVRVKVERLSDEEVHEEVSQPVSASQSSLSDQQTVPGSEQVQEDLLISPQSSSIGSVDEGVTEGLPTLQSTSSTNAHTEDDDRSTERPGPNGPDRPFQCPTCGVRFTRIQNLKQHMLIHSGIKPFQCDRCGKKFTRAYSLKMHRLKHEGKRCFRCQICSATFTSFGEYKHHMRVSRHIIRKPRIYECKTCGAMFTNSGNLIVHLRSLNHEASELANYFQSSDFLVPDYLNQEPEDTLVQYDLGEHSFESSSSVQMPVISQVSSTQNCESSFPLGSLGELAEKEEEMPDQPKTSVCAEATRDDPPKSELSSITIE
SIO_010081: ZBTB44
subclass of: SO_0000673
so part of: ZBTB44
location: join(3458845..3459862,3471024..3471108,3473529..3473641,3475015..3475315,3477044..3477326)
location: region:3458845-3477326:1
so has part: feature:3458845-3459862:1:exon
so has part: feature:3471024-3471108:1:exon
so has part: feature:3473529-3473641:1:exon
so has part: feature:3475015-3475315:1:exon
so has part: feature:3477044-3477326:1:exon

XP_032328423.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3458845-3459862:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3471024-3471108:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3473529-3473641:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3475015-3475315:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3477044-3477326:1:exon

ZBTB44
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 419612
gene: ZBTB44
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger and BTB domain-containing protein 44 isoform X4
translation: MGVKTFTHSSSSHSQEMLGKLNMLRNDGHFCDITIRVQDKVFRAHKVVLAACSDFFRTKLVGQAEDDNKNVLDLHHVTVTGFIPLLEYAYTATLSINTENIIDVLAAASYMQMFSVASTCSEFMKSSILWNTPNSQPEKSLDAGQENNSNCNFTSRDGSISPVSSECSVVERTIPVCRESRRKRKSYIVMSPESPVKCSTQTSSPQVLNSSAPYSENRNQPVDSSLAFPWTFPFGIDRRIQPDKVKPAENTRTLELPGPSETGRRMAEYVTCESTKTTLPLGTEEDVRVKVERLSDEEVHEEVSQPVSASQSSLSDQQTVPGSEQVQEDLLISPQSSSIGSVDEGVTEGLPTLQSTSSTNAHTEDDDRTERPGPNGPDRPFQCPTCGVRFTRIQNLKQHMLIHSGIKPFQCDRCGKKFTRAYSLKMHRLKHEGKRCFRCQICSATFTSFGEYKHHMRVSRHIIRKPRIYECKTCGAMFTNSGNLIVHLRSLNHEASELANYFQSSDFLVPDYLNQEPEDTLVQYDLGEHSFESSSSVQMPVISQVSSTQNCESSFPLGSLGELAEKEEEMPDQPKTSVCAEATRDDPPKSELSSITIE
SIO_010081: ZBTB44
subclass of: SO_0000673
so part of: ZBTB44
location: join(3458845..3459862,3471024..3471108,3473532..3473641,3475015..3475315,3477044..3477326)
location: region:3458845-3477326:1
so has part: feature:3458845-3459862:1:exon
so has part: feature:3471024-3471108:1:exon
so has part: feature:3473532-3473641:1:exon
so has part: feature:3475015-3475315:1:exon
so has part: feature:3477044-3477326:1:exon

XP_032328424.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3458845-3459862:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3471024-3471108:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3473532-3473641:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3475015-3475315:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3477044-3477326:1:exon

ST14
type: Gene
subclass of: SO_0000704
RO_0002162: 419612
gene: ST14
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(3495750..3527943)
location: region:3495750-3527943:-1
so has part: feature:3495750-3527943:-1:exon
subclass of: SO_0000010

102503998
type: Gene
SIO_000068: ncbigene

position:3495750:-1
position: 3495750
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3527943:-1
position: 3527943
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3495750-3527943:-1:exon

ST14
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 419612
gene: ST14
product: suppression of tumorigenicity 14, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 12 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 30 samples with support for all annotated introns
transcript id: XM_032472311.1
SIO_010081: ST14
subclass of: SO_0000673
so part of: ST14
location: complement(join(3495750..3496408,3496495..3496631,3497233..3497507,3500771..3500957,3501693..3501815,3502024..3502137,3502220..3502330,3502645..3502749,3503975..3504105,3504189..3504298,3504916..3505013,3505208..3505347,3506178..3506418,3506683..3506718,3506928..3507085,3507597..3507667,3507914..3508041,3508203..3508362,3527732..3527943))
location: region:3495750-3527943:-1
so has part: feature:3527732-3527943:-1:exon
so has part: feature:3508203-3508362:-1:exon
so has part: feature:3507914-3508041:-1:exon
so has part: feature:3507597-3507667:-1:exon
so has part: feature:3506928-3507085:-1:exon
so has part: feature:3506683-3506718:-1:exon
so has part: feature:3506178-3506418:-1:exon
so has part: feature:3505208-3505347:-1:exon
so has part: feature:3504916-3505013:-1:exon
so has part: feature:3504189-3504298:-1:exon
so has part: feature:3503975-3504105:-1:exon
so has part: feature:3502645-3502749:-1:exon
so has part: feature:3502220-3502330:-1:exon
so has part: feature:3502024-3502137:-1:exon
so has part: feature:3501693-3501815:-1:exon
so has part: feature:3500771-3500957:-1:exon
so has part: feature:3497233-3497507:-1:exon
so has part: feature:3496495-3496631:-1:exon
so has part: feature:3495750-3496408:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3527732-3527943:-1:exon

position:3527732:-1
position: 3527732
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3508203-3508362:-1:exon

position:3508203:-1
position: 3508203
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3508362:-1
position: 3508362
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3507914-3508041:-1:exon

position:3507914:-1
position: 3507914
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3508041:-1
position: 3508041
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3507597-3507667:-1:exon

position:3507597:-1
position: 3507597
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3507667:-1
position: 3507667
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:3506928-3507085:-1:exon

position:3506928:-1
position: 3506928
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3507085:-1
position: 3507085
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:3506683-3506718:-1:exon

position:3506683:-1
position: 3506683
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3506718:-1
position: 3506718
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:3506178-3506418:-1:exon

position:3506178:-1
position: 3506178
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3506418:-1
position: 3506418
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:3505208-3505347:-1:exon

position:3505208:-1
position: 3505208
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3505347:-1
position: 3505347
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:3504916-3505013:-1:exon

position:3504916:-1
position: 3504916
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3505013:-1
position: 3505013
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:3504189-3504298:-1:exon

position:3504189:-1
position: 3504189
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3504298:-1
position: 3504298
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:3503975-3504105:-1:exon

position:3503975:-1
position: 3503975
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3504105:-1
position: 3504105
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:3502645-3502749:-1:exon

position:3502645:-1
position: 3502645
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3502749:-1
position: 3502749
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:3502220-3502330:-1:exon

position:3502220:-1
position: 3502220
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3502330:-1
position: 3502330
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:3502024-3502137:-1:exon

position:3502024:-1
position: 3502024
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3502137:-1
position: 3502137
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:3501693-3501815:-1:exon

position:3501693:-1
position: 3501693
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3501815:-1
position: 3501815
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:3500771-3500957:-1:exon

position:3500771:-1
position: 3500771
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3500957:-1
position: 3500957
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:3497233-3497507:-1:exon

position:3497233:-1
position: 3497233
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3497507:-1
position: 3497507
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:3496495-3496631:-1:exon

position:3496495:-1
position: 3496495
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3496631:-1
position: 3496631
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:3495750-3496408:-1:exon

position:3496408:-1
position: 3496408
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

ST14
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 419612
gene: ST14
product: suppression of tumorigenicity 14, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 12 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XM_032472313.1
SIO_010081: ST14
subclass of: SO_0000673
so part of: ST14
location: complement(join(3495750..3496408,3496495..3496631,3497233..3497507,3500771..3500957,3501693..3501815,3502024..3502137,3502220..3502330,3502645..3502749,3503975..3504105,3504189..3504298,3504916..3505013,3505208..3505347,3506178..3506418,3506683..3506718,3506928..3507085,3507597..3507667,3507914..3508041,3508203..3508362,3524200..3524250))
location: region:3495750-3524250:-1
so has part: feature:3524200-3524250:-1:exon
so has part: feature:3508203-3508362:-1:exon
so has part: feature:3507914-3508041:-1:exon
so has part: feature:3507597-3507667:-1:exon
so has part: feature:3506928-3507085:-1:exon
so has part: feature:3506683-3506718:-1:exon
so has part: feature:3506178-3506418:-1:exon
so has part: feature:3505208-3505347:-1:exon
so has part: feature:3504916-3505013:-1:exon
so has part: feature:3504189-3504298:-1:exon
so has part: feature:3503975-3504105:-1:exon
so has part: feature:3502645-3502749:-1:exon
so has part: feature:3502220-3502330:-1:exon
so has part: feature:3502024-3502137:-1:exon
so has part: feature:3501693-3501815:-1:exon
so has part: feature:3500771-3500957:-1:exon
so has part: feature:3497233-3497507:-1:exon
so has part: feature:3496495-3496631:-1:exon
so has part: feature:3495750-3496408:-1:exon

position:3524250:-1
position: 3524250
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3524200-3524250:-1:exon

position:3524200:-1
position: 3524200
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3508203-3508362:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3507914-3508041:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3507597-3507667:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3506928-3507085:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3506683-3506718:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3506178-3506418:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3505208-3505347:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3504916-3505013:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3504189-3504298:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3503975-3504105:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3502645-3502749:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3502220-3502330:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:3502024-3502137:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:3501693-3501815:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:3500771-3500957:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:3497233-3497507:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:3496495-3496631:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:3495750-3496408:-1:exon

ST14
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 419612
gene: ST14
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: suppressor of tumorigenicity 14 protein isoform X1
translation: MRSDRAHRGSGGSGGLGAGLKYSSRPENMNGFEEGVEFLPANNTRMVEKGGPRHGVVLAAVLAGVLVLSLMTGLLVWHFQYQNVRVQKVFNGYLRISNENFLDAYENPNSTEFANLAKKVKEALKLLYSGIPVLGPYHKKSAVTAFSEGSVIAYYWAEFSVPKNLVEEVERAMAEERVVTLPPRARTLSSFVLTSVVAFPTDPRTVQNAQDNSCSFALHARGSEPIRFSTPGFPNSPYPSHARCQWTLRGDADSALSLTFHSFDVSTCDEHGSDLVTVYDTLSPVEPRAVVQLCGTYPPSYNLTFLSSQNVLLVTLVTSTERRHPGFEAVFFQLPRMSSCGGYLRGAQGTFSSPYYPGHYPPNVNCTWHIEVPNNQNVKVRFKAFYLLEPSVPLGSCSKDYVEINGERFCGERSQFVVSSRSSKITVHFHSDQSYTDTGFLAEYLSYDSSDPCPGKFMCNTGRCVAKELRCDGWADCTDYSDERDCKCNATHQFTCGDSFCKPLFWVCDSVNDCEDGSDEKGCSCPADTFKCGNGKCLLQSQRCDGKNDCGDGSDEATCDRVSTITCTKQTYRCLNGLCISKGNPECDGKKDCTDGSDEKNCDCGLRSFTRQSRVVGGENADEGEWPWQVSLHALGQGHVCGASLISPDWMVSAAHCFVDYRGFRYSDHSMWTAYLGLHDQSQRSAPGVQELRLQRIISHPYFNDFTFDYDIALLQLERPVEYSPTVRPICLPDATHAFPAGKAIWVTGWGHTQEGGTGALILQKGEIRVINQTTCERLLPHQITARMMCVGYLSGGVDACQGDSGGPLSSAEANGRMFQAGVVSWGDGCAQRNKPGVYTRLPVFRDWIKEQTGV
SIO_010081: ST14
subclass of: SO_0000673
so part of: ST14
location: complement(join(3496247..3496408,3496495..3496631,3497233..3497507,3500771..3500957,3501693..3501815,3502024..3502137,3502220..3502330,3502645..3502749,3503975..3504105,3504189..3504298,3504916..3505013,3505208..3505347,3506178..3506418,3506683..3506718,3506928..3507085,3507597..3507667,3507914..3508041,3508203..3508362,3527732..3527812))
location: region:3496247-3527812:-1
so has part: feature:3527732-3527812:-1:exon
so has part: feature:3508203-3508362:-1:exon
so has part: feature:3507914-3508041:-1:exon
so has part: feature:3507597-3507667:-1:exon
so has part: feature:3506928-3507085:-1:exon
so has part: feature:3506683-3506718:-1:exon
so has part: feature:3506178-3506418:-1:exon
so has part: feature:3505208-3505347:-1:exon
so has part: feature:3504916-3505013:-1:exon
so has part: feature:3504189-3504298:-1:exon
so has part: feature:3503975-3504105:-1:exon
so has part: feature:3502645-3502749:-1:exon
so has part: feature:3502220-3502330:-1:exon
so has part: feature:3502024-3502137:-1:exon
so has part: feature:3501693-3501815:-1:exon
so has part: feature:3500771-3500957:-1:exon
so has part: feature:3497233-3497507:-1:exon
so has part: feature:3496495-3496631:-1:exon
so has part: feature:3496247-3496408:-1:exon

XP_032328202.1
type: Protein
SIO_000068: ncbiprotein

position:3496247:-1
position: 3496247
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3527812:-1
position: 3527812
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3527732-3527812:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3508203-3508362:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3507914-3508041:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3507597-3507667:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3506928-3507085:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3506683-3506718:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3506178-3506418:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3505208-3505347:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3504916-3505013:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3504189-3504298:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3503975-3504105:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3502645-3502749:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3502220-3502330:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:3502024-3502137:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:3501693-3501815:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:3500771-3500957:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:3497233-3497507:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:3496495-3496631:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:3496247-3496408:-1:exon

ST14
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 419612
gene: ST14
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: suppressor of tumorigenicity 14 protein isoform X2
translation: MREGSTSLTAAQNMNGFEEGVEFLPANNTRMVEKGGPRHGVVLAAVLAGVLVLSLMTGLLVWHFQYQNVRVQKVFNGYLRISNENFLDAYENPNSTEFANLAKKVKEALKLLYSGIPVLGPYHKKSAVTAFSEGSVIAYYWAEFSVPKNLVEEVERAMAEERVVTLPPRARTLSSFVLTSVVAFPTDPRTVQNAQDNSCSFALHARGSEPIRFSTPGFPNSPYPSHARCQWTLRGDADSALSLTFHSFDVSTCDEHGSDLVTVYDTLSPVEPRAVVQLCGTYPPSYNLTFLSSQNVLLVTLVTSTERRHPGFEAVFFQLPRMSSCGGYLRGAQGTFSSPYYPGHYPPNVNCTWHIEVPNNQNVKVRFKAFYLLEPSVPLGSCSKDYVEINGERFCGERSQFVVSSRSSKITVHFHSDQSYTDTGFLAEYLSYDSSDPCPGKFMCNTGRCVAKELRCDGWADCTDYSDERDCKCNATHQFTCGDSFCKPLFWVCDSVNDCEDGSDEKGCSCPADTFKCGNGKCLLQSQRCDGKNDCGDGSDEATCDRVSTITCTKQTYRCLNGLCISKGNPECDGKKDCTDGSDEKNCDCGLRSFTRQSRVVGGENADEGEWPWQVSLHALGQGHVCGASLISPDWMVSAAHCFVDYRGFRYSDHSMWTAYLGLHDQSQRSAPGVQELRLQRIISHPYFNDFTFDYDIALLQLERPVEYSPTVRPICLPDATHAFPAGKAIWVTGWGHTQEGGTGALILQKGEIRVINQTTCERLLPHQITARMMCVGYLSGGVDACQGDSGGPLSSAEANGRMFQAGVVSWGDGCAQRNKPGVYTRLPVFRDWIKEQTGV
SIO_010081: ST14
subclass of: SO_0000673
so part of: ST14
location: complement(join(3496247..3496408,3496495..3496631,3497233..3497507,3500771..3500957,3501693..3501815,3502024..3502137,3502220..3502330,3502645..3502749,3503975..3504105,3504189..3504298,3504916..3505013,3505208..3505347,3506178..3506418,3506683..3506718,3506928..3507085,3507597..3507667,3507914..3508041,3508203..3508362,3524200..3524235))
location: region:3496247-3524235:-1
so has part: feature:3524200-3524235:-1:exon
so has part: feature:3508203-3508362:-1:exon
so has part: feature:3507914-3508041:-1:exon
so has part: feature:3507597-3507667:-1:exon
so has part: feature:3506928-3507085:-1:exon
so has part: feature:3506683-3506718:-1:exon
so has part: feature:3506178-3506418:-1:exon
so has part: feature:3505208-3505347:-1:exon
so has part: feature:3504916-3505013:-1:exon
so has part: feature:3504189-3504298:-1:exon
so has part: feature:3503975-3504105:-1:exon
so has part: feature:3502645-3502749:-1:exon
so has part: feature:3502220-3502330:-1:exon
so has part: feature:3502024-3502137:-1:exon
so has part: feature:3501693-3501815:-1:exon
so has part: feature:3500771-3500957:-1:exon
so has part: feature:3497233-3497507:-1:exon
so has part: feature:3496495-3496631:-1:exon
so has part: feature:3496247-3496408:-1:exon

XP_032328204.1
type: Protein
SIO_000068: ncbiprotein

position:3524235:-1
position: 3524235
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3524200-3524235:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3508203-3508362:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3507914-3508041:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3507597-3507667:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3506928-3507085:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3506683-3506718:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3506178-3506418:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3505208-3505347:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3504916-3505013:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3504189-3504298:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3503975-3504105:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3502645-3502749:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3502220-3502330:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:3502024-3502137:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:3501693-3501815:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:3500771-3500957:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:3497233-3497507:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:3496495-3496631:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:3496247-3496408:-1:exon

APLP2
type: Gene
subclass of: SO_0000704
RO_0002162: 419612
gene: APLP2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(3540114..3598628)
location: region:3540114-3598628:-1
so has part: feature:3540114-3598628:-1:exon
subclass of: SO_0000010

102522735
type: Gene
SIO_000068: ncbigene

position:3540114:-1
position: 3540114
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3598628:-1
position: 3598628
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3540114-3598628:-1:exon

APLP2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 419612
gene: APLP2
product: amyloid beta precursor like protein 2, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 20 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 46 samples with support for all annotated introns
transcript id: XM_032472639.1
SIO_010081: APLP2
subclass of: SO_0000673
so part of: APLP2
location: complement(join(3540114..3541559,3542659..3542814,3543112..3543186,3543871..3543956,3546640..3546675,3548159..3548311,3549698..3549797,3552538..3552666,3553475..3553633,3554839..3554913,3555604..3555734,3560009..3560229,3560581..3560774,3561545..3561657,3568662..3568785,3569601..3569774,3598404..3598628))
location: region:3540114-3598628:-1
so has part: feature:3598404-3598628:-1:exon
so has part: feature:3569601-3569774:-1:exon
so has part: feature:3568662-3568785:-1:exon
so has part: feature:3561545-3561657:-1:exon
so has part: feature:3560581-3560774:-1:exon
so has part: feature:3560009-3560229:-1:exon
so has part: feature:3555604-3555734:-1:exon
so has part: feature:3554839-3554913:-1:exon
so has part: feature:3553475-3553633:-1:exon
so has part: feature:3552538-3552666:-1:exon
so has part: feature:3549698-3549797:-1:exon
so has part: feature:3548159-3548311:-1:exon
so has part: feature:3546640-3546675:-1:exon
so has part: feature:3543871-3543956:-1:exon
so has part: feature:3543112-3543186:-1:exon
so has part: feature:3542659-3542814:-1:exon
so has part: feature:3540114-3541559:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3598404-3598628:-1:exon

position:3598404:-1
position: 3598404
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3569601-3569774:-1:exon

position:3569601:-1
position: 3569601
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3569774:-1
position: 3569774
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3568662-3568785:-1:exon

position:3568662:-1
position: 3568662
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3568785:-1
position: 3568785
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3561545-3561657:-1:exon

position:3561545:-1
position: 3561545
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3561657:-1
position: 3561657
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:3560581-3560774:-1:exon

position:3560581:-1
position: 3560581
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3560774:-1
position: 3560774
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:3560009-3560229:-1:exon

position:3560009:-1
position: 3560009
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3560229:-1
position: 3560229
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:3555604-3555734:-1:exon

position:3555604:-1
position: 3555604
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3555734:-1
position: 3555734
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:3554839-3554913:-1:exon

position:3554839:-1
position: 3554839
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3554913:-1
position: 3554913
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:3553475-3553633:-1:exon

position:3553475:-1
position: 3553475
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3553633:-1
position: 3553633
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:3552538-3552666:-1:exon

position:3552538:-1
position: 3552538
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3552666:-1
position: 3552666
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:3549698-3549797:-1:exon

position:3549698:-1
position: 3549698
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3549797:-1
position: 3549797
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:3548159-3548311:-1:exon

position:3548159:-1
position: 3548159
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3548311:-1
position: 3548311
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:3546640-3546675:-1:exon

position:3546640:-1
position: 3546640
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3546675:-1
position: 3546675
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:3543871-3543956:-1:exon

position:3543871:-1
position: 3543871
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3543956:-1
position: 3543956
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:3543112-3543186:-1:exon

position:3543112:-1
position: 3543112
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3543186:-1
position: 3543186
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:3542659-3542814:-1:exon

position:3542659:-1
position: 3542659
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3542814:-1
position: 3542814
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:3540114-3541559:-1:exon

position:3541559:-1
position: 3541559
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

APLP2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 419612
gene: APLP2
product: amyloid beta precursor like protein 2, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 20 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 47 samples with support for all annotated introns
transcript id: XM_032472640.1
SIO_010081: APLP2
subclass of: SO_0000673
so part of: APLP2
location: complement(join(3540114..3541559,3542659..3542814,3543112..3543186,3543871..3543956,3548159..3548311,3549698..3549797,3552538..3552666,3553475..3553633,3554839..3554913,3555604..3555734,3560009..3560229,3560581..3560774,3561545..3561657,3568662..3568785,3569601..3569774,3598404..3598627))
location: region:3540114-3598627:-1
so has part: feature:3598404-3598627:-1:exon
so has part: feature:3569601-3569774:-1:exon
so has part: feature:3568662-3568785:-1:exon
so has part: feature:3561545-3561657:-1:exon
so has part: feature:3560581-3560774:-1:exon
so has part: feature:3560009-3560229:-1:exon
so has part: feature:3555604-3555734:-1:exon
so has part: feature:3554839-3554913:-1:exon
so has part: feature:3553475-3553633:-1:exon
so has part: feature:3552538-3552666:-1:exon
so has part: feature:3549698-3549797:-1:exon
so has part: feature:3548159-3548311:-1:exon
so has part: feature:3543871-3543956:-1:exon
so has part: feature:3543112-3543186:-1:exon
so has part: feature:3542659-3542814:-1:exon
so has part: feature:3540114-3541559:-1:exon

position:3598627:-1
position: 3598627
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3598404-3598627:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3569601-3569774:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3568662-3568785:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3561545-3561657:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3560581-3560774:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3560009-3560229:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3555604-3555734:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3554839-3554913:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3553475-3553633:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3552538-3552666:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3549698-3549797:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3548159-3548311:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3543871-3543956:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:3543112-3543186:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:3542659-3542814:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:3540114-3541559:-1:exon

APLP2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 419612
gene: APLP2
product: amyloid beta precursor like protein 2, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 25 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 47 samples with support for all annotated introns
transcript id: XM_032472638.1
SIO_010081: APLP2
subclass of: SO_0000673
so part of: APLP2
location: complement(join(3540114..3541559,3542659..3542814,3543112..3543186,3543871..3543956,3548159..3548311,3549698..3549797,3552538..3552666,3553475..3553633,3554839..3554913,3555604..3555734,3558751..3558918,3560009..3560229,3560581..3560774,3561545..3561657,3568662..3568785,3569601..3569774,3598404..3598627))
location: region:3540114-3598627:-1
so has part: feature:3598404-3598627:-1:exon
so has part: feature:3569601-3569774:-1:exon
so has part: feature:3568662-3568785:-1:exon
so has part: feature:3561545-3561657:-1:exon
so has part: feature:3560581-3560774:-1:exon
so has part: feature:3560009-3560229:-1:exon
so has part: feature:3558751-3558918:-1:exon
so has part: feature:3555604-3555734:-1:exon
so has part: feature:3554839-3554913:-1:exon
so has part: feature:3553475-3553633:-1:exon
so has part: feature:3552538-3552666:-1:exon
so has part: feature:3549698-3549797:-1:exon
so has part: feature:3548159-3548311:-1:exon
so has part: feature:3543871-3543956:-1:exon
so has part: feature:3543112-3543186:-1:exon
so has part: feature:3542659-3542814:-1:exon
so has part: feature:3540114-3541559:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3598404-3598627:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3569601-3569774:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3568662-3568785:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3561545-3561657:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3560581-3560774:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3560009-3560229:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3558751-3558918:-1:exon

position:3558751:-1
position: 3558751
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3558918:-1
position: 3558918
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:3555604-3555734:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3554839-3554913:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3553475-3553633:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3552538-3552666:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3549698-3549797:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3548159-3548311:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:3543871-3543956:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:3543112-3543186:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:3542659-3542814:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:3540114-3541559:-1:exon

APLP2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 419612
gene: APLP2
product: amyloid beta precursor like protein 2, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 25 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 46 samples with support for all annotated introns
transcript id: XM_032472637.1
SIO_010081: APLP2
subclass of: SO_0000673
so part of: APLP2
location: complement(join(3540114..3541559,3542659..3542814,3543112..3543186,3543871..3543956,3546640..3546675,3548159..3548311,3549698..3549797,3552538..3552666,3553475..3553633,3554839..3554913,3555604..3555734,3558751..3558918,3560009..3560229,3560581..3560774,3561545..3561657,3568662..3568785,3569601..3569774,3598404..3598627))
location: region:3540114-3598627:-1
so has part: feature:3598404-3598627:-1:exon
so has part: feature:3569601-3569774:-1:exon
so has part: feature:3568662-3568785:-1:exon
so has part: feature:3561545-3561657:-1:exon
so has part: feature:3560581-3560774:-1:exon
so has part: feature:3560009-3560229:-1:exon
so has part: feature:3558751-3558918:-1:exon
so has part: feature:3555604-3555734:-1:exon
so has part: feature:3554839-3554913:-1:exon
so has part: feature:3553475-3553633:-1:exon
so has part: feature:3552538-3552666:-1:exon
so has part: feature:3549698-3549797:-1:exon
so has part: feature:3548159-3548311:-1:exon
so has part: feature:3546640-3546675:-1:exon
so has part: feature:3543871-3543956:-1:exon
so has part: feature:3543112-3543186:-1:exon
so has part: feature:3542659-3542814:-1:exon
so has part: feature:3540114-3541559:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3598404-3598627:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3569601-3569774:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3568662-3568785:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3561545-3561657:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3560581-3560774:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3560009-3560229:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3558751-3558918:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3555604-3555734:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3554839-3554913:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3553475-3553633:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3552538-3552666:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3549698-3549797:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3548159-3548311:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:3546640-3546675:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:3543871-3543956:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:3543112-3543186:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:3542659-3542814:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:3540114-3541559:-1:exon

APLP2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 419612
gene: APLP2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: amyloid-like protein 2 isoform X4
translation: MAATGTAAAAATGKLLVLLLLGLTAPAAALAGYIEALAANAGTGFAVAEPQVAMFCGKLNMHVNIQTGRWEPDPTGTKSCFGTKEEVLQYCQEMYPELQITNVMEANQPVSVDNWCRRDKKQCQSHIVIPFKCLVGEFVSDVLLVPEKCQFFHKERMEVCENHQHWHTVVKEACLTQGLTLYSYGMLLPCGVDQFHGTEYVCCPQTKVMETAVSKEEEEEEDDDEEEEEEDYDIYKSEFPTEADLEDFTEAAVDEEDEDEDEDEEEGEEVVEDRDYYYDTFKGDDYAEEGPTEPGSDRTVSEKEIAHDVKVPPTPLPTNDVDVYFETSADDNEHARFQKAKEQLEIRHRNRMDRVKKEWEEAELQAKNLPKAERQTLIQHFQAMVKALEKEAASEKQQLVETHLARVEAMLNDRRRVALENYLAALQSDPPRPHRILQALRRYVRAENKDRLHTIRHYQHVLAVDPEKAAQMKSQVMTHLHVIEERRNQSLSLLYKVPYVAQEIQEEIDELLQEQRADMDQFTASISETPVDVRVSSEESDEIPPFHPLHPFPSLPENEGSALGEQDGGLIGAEEKVINSKNKVDENMVIDETLDVKEMIFNAERVGGLEEEPESLGPLREDFGLSSSALIGLLVIAVAIATVIVVSLVMLRKRQYGSISHGIVEVDPMLTPEERHLNKMQNHGYENPTYKYLEQMQI
SIO_010081: APLP2
subclass of: SO_0000673
so part of: APLP2
location: complement(join(3541458..3541559,3542659..3542814,3543112..3543186,3543871..3543956,3548159..3548311,3549698..3549797,3552538..3552666,3553475..3553633,3554839..3554913,3555604..3555734,3560009..3560229,3560581..3560774,3561545..3561657,3568662..3568785,3569601..3569774,3598404..3598508))
location: region:3541458-3598508:-1
so has part: feature:3598404-3598508:-1:exon
so has part: feature:3569601-3569774:-1:exon
so has part: feature:3568662-3568785:-1:exon
so has part: feature:3561545-3561657:-1:exon
so has part: feature:3560581-3560774:-1:exon
so has part: feature:3560009-3560229:-1:exon
so has part: feature:3555604-3555734:-1:exon
so has part: feature:3554839-3554913:-1:exon
so has part: feature:3553475-3553633:-1:exon
so has part: feature:3552538-3552666:-1:exon
so has part: feature:3549698-3549797:-1:exon
so has part: feature:3548159-3548311:-1:exon
so has part: feature:3543871-3543956:-1:exon
so has part: feature:3543112-3543186:-1:exon
so has part: feature:3542659-3542814:-1:exon
so has part: feature:3541458-3541559:-1:exon

XP_032328531.1
type: Protein
SIO_000068: ncbiprotein

position:3541458:-1
position: 3541458
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3598508:-1
position: 3598508
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3598404-3598508:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3569601-3569774:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3568662-3568785:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3561545-3561657:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3560581-3560774:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3560009-3560229:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3555604-3555734:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3554839-3554913:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3553475-3553633:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3552538-3552666:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3549698-3549797:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3548159-3548311:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3543871-3543956:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:3543112-3543186:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:3542659-3542814:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:3541458-3541559:-1:exon

APLP2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 419612
gene: APLP2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: amyloid-like protein 2 isoform X3
translation: MAATGTAAAAATGKLLVLLLLGLTAPAAALAGYIEALAANAGTGFAVAEPQVAMFCGKLNMHVNIQTGRWEPDPTGTKSCFGTKEEVLQYCQEMYPELQITNVMEANQPVSVDNWCRRDKKQCQSHIVIPFKCLVGEFVSDVLLVPEKCQFFHKERMEVCENHQHWHTVVKEACLTQGLTLYSYGMLLPCGVDQFHGTEYVCCPQTKVMETAVSKEEEEEEDDDEEEEEEDYDIYKSEFPTEADLEDFTEAAVDEEDEDEDEDEEEGEEVVEDRDYYYDTFKGDDYAEEGPTEPGSDRTVSEKEIAHDVKVPPTPLPTNDVDVYFETSADDNEHARFQKAKEQLEIRHRNRMDRVKKEWEEAELQAKNLPKAERQTLIQHFQAMVKALEKEAASEKQQLVETHLARVEAMLNDRRRVALENYLAALQSDPPRPHRILQALRRYVRAENKDRLHTIRHYQHVLAVDPEKAAQMKSQVMTHLHVIEERRNQSLSLLYKVPYVAQEIQEEIDELLQEQRADMDQFTASISETPVDVRVSSEESDEIPPFHPLHPFPSLPENEDTQPELFHPMKKGSALGEQDGGLIGAEEKVINSKNKVDENMVIDETLDVKEMIFNAERVGGLEEEPESLGPLREDFGLSSSALIGLLVIAVAIATVIVVSLVMLRKRQYGSISHGIVEVDPMLTPEERHLNKMQNHGYENPTYKYLEQMQI
SIO_010081: APLP2
subclass of: SO_0000673
so part of: APLP2
location: complement(join(3541458..3541559,3542659..3542814,3543112..3543186,3543871..3543956,3546640..3546675,3548159..3548311,3549698..3549797,3552538..3552666,3553475..3553633,3554839..3554913,3555604..3555734,3560009..3560229,3560581..3560774,3561545..3561657,3568662..3568785,3569601..3569774,3598404..3598508))
location: region:3541458-3598508:-1
so has part: feature:3598404-3598508:-1:exon
so has part: feature:3569601-3569774:-1:exon
so has part: feature:3568662-3568785:-1:exon
so has part: feature:3561545-3561657:-1:exon
so has part: feature:3560581-3560774:-1:exon
so has part: feature:3560009-3560229:-1:exon
so has part: feature:3555604-3555734:-1:exon
so has part: feature:3554839-3554913:-1:exon
so has part: feature:3553475-3553633:-1:exon
so has part: feature:3552538-3552666:-1:exon
so has part: feature:3549698-3549797:-1:exon
so has part: feature:3548159-3548311:-1:exon
so has part: feature:3546640-3546675:-1:exon
so has part: feature:3543871-3543956:-1:exon
so has part: feature:3543112-3543186:-1:exon
so has part: feature:3542659-3542814:-1:exon
so has part: feature:3541458-3541559:-1:exon

XP_032328530.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3598404-3598508:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3569601-3569774:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3568662-3568785:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3561545-3561657:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3560581-3560774:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3560009-3560229:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3555604-3555734:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3554839-3554913:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3553475-3553633:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3552538-3552666:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3549698-3549797:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3548159-3548311:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3546640-3546675:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:3543871-3543956:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:3543112-3543186:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:3542659-3542814:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:3541458-3541559:-1:exon

APLP2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 419612
gene: APLP2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: amyloid-like protein 2 isoform X2
translation: MAATGTAAAAATGKLLVLLLLGLTAPAAALAGYIEALAANAGTGFAVAEPQVAMFCGKLNMHVNIQTGRWEPDPTGTKSCFGTKEEVLQYCQEMYPELQITNVMEANQPVSVDNWCRRDKKQCQSHIVIPFKCLVGEFVSDVLLVPEKCQFFHKERMEVCENHQHWHTVVKEACLTQGLTLYSYGMLLPCGVDQFHGTEYVCCPQTKVMETAVSKEEEEEEDDDEEEEEEDYDIYKSEFPTEADLEDFTEAAVDEEDEDEDEDEEEGEEVVEDRDYYYDTFKGDDYAEEGPTEPGSDRTVSEKEIAHDVKAVCSQEALTGPCRAVMPRWYFDLSKGKCVRFIYGGCGGNRNNFESEDYCMAVCKAMIPPTPLPTNDVDVYFETSADDNEHARFQKAKEQLEIRHRNRMDRVKKEWEEAELQAKNLPKAERQTLIQHFQAMVKALEKEAASEKQQLVETHLARVEAMLNDRRRVALENYLAALQSDPPRPHRILQALRRYVRAENKDRLHTIRHYQHVLAVDPEKAAQMKSQVMTHLHVIEERRNQSLSLLYKVPYVAQEIQEEIDELLQEQRADMDQFTASISETPVDVRVSSEESDEIPPFHPLHPFPSLPENEGSALGEQDGGLIGAEEKVINSKNKVDENMVIDETLDVKEMIFNAERVGGLEEEPESLGPLREDFGLSSSALIGLLVIAVAIATVIVVSLVMLRKRQYGSISHGIVEVDPMLTPEERHLNKMQNHGYENPTYKYLEQMQI
SIO_010081: APLP2
subclass of: SO_0000673
so part of: APLP2
location: complement(join(3541458..3541559,3542659..3542814,3543112..3543186,3543871..3543956,3548159..3548311,3549698..3549797,3552538..3552666,3553475..3553633,3554839..3554913,3555604..3555734,3558751..3558918,3560009..3560229,3560581..3560774,3561545..3561657,3568662..3568785,3569601..3569774,3598404..3598508))
location: region:3541458-3598508:-1
so has part: feature:3598404-3598508:-1:exon
so has part: feature:3569601-3569774:-1:exon
so has part: feature:3568662-3568785:-1:exon
so has part: feature:3561545-3561657:-1:exon
so has part: feature:3560581-3560774:-1:exon
so has part: feature:3560009-3560229:-1:exon
so has part: feature:3558751-3558918:-1:exon
so has part: feature:3555604-3555734:-1:exon
so has part: feature:3554839-3554913:-1:exon
so has part: feature:3553475-3553633:-1:exon
so has part: feature:3552538-3552666:-1:exon
so has part: feature:3549698-3549797:-1:exon
so has part: feature:3548159-3548311:-1:exon
so has part: feature:3543871-3543956:-1:exon
so has part: feature:3543112-3543186:-1:exon
so has part: feature:3542659-3542814:-1:exon
so has part: feature:3541458-3541559:-1:exon

XP_032328529.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3598404-3598508:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3569601-3569774:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3568662-3568785:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3561545-3561657:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3560581-3560774:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3560009-3560229:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3558751-3558918:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3555604-3555734:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3554839-3554913:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3553475-3553633:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3552538-3552666:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3549698-3549797:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3548159-3548311:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:3543871-3543956:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:3543112-3543186:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:3542659-3542814:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:3541458-3541559:-1:exon

APLP2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 419612
gene: APLP2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: amyloid-like protein 2 isoform X1
translation: MAATGTAAAAATGKLLVLLLLGLTAPAAALAGYIEALAANAGTGFAVAEPQVAMFCGKLNMHVNIQTGRWEPDPTGTKSCFGTKEEVLQYCQEMYPELQITNVMEANQPVSVDNWCRRDKKQCQSHIVIPFKCLVGEFVSDVLLVPEKCQFFHKERMEVCENHQHWHTVVKEACLTQGLTLYSYGMLLPCGVDQFHGTEYVCCPQTKVMETAVSKEEEEEEDDDEEEEEEDYDIYKSEFPTEADLEDFTEAAVDEEDEDEDEDEEEGEEVVEDRDYYYDTFKGDDYAEEGPTEPGSDRTVSEKEIAHDVKAVCSQEALTGPCRAVMPRWYFDLSKGKCVRFIYGGCGGNRNNFESEDYCMAVCKAMIPPTPLPTNDVDVYFETSADDNEHARFQKAKEQLEIRHRNRMDRVKKEWEEAELQAKNLPKAERQTLIQHFQAMVKALEKEAASEKQQLVETHLARVEAMLNDRRRVALENYLAALQSDPPRPHRILQALRRYVRAENKDRLHTIRHYQHVLAVDPEKAAQMKSQVMTHLHVIEERRNQSLSLLYKVPYVAQEIQEEIDELLQEQRADMDQFTASISETPVDVRVSSEESDEIPPFHPLHPFPSLPENEDTQPELFHPMKKGSALGEQDGGLIGAEEKVINSKNKVDENMVIDETLDVKEMIFNAERVGGLEEEPESLGPLREDFGLSSSALIGLLVIAVAIATVIVVSLVMLRKRQYGSISHGIVEVDPMLTPEERHLNKMQNHGYENPTYKYLEQMQI
SIO_010081: APLP2
subclass of: SO_0000673
so part of: APLP2
location: complement(join(3541458..3541559,3542659..3542814,3543112..3543186,3543871..3543956,3546640..3546675,3548159..3548311,3549698..3549797,3552538..3552666,3553475..3553633,3554839..3554913,3555604..3555734,3558751..3558918,3560009..3560229,3560581..3560774,3561545..3561657,3568662..3568785,3569601..3569774,3598404..3598508))
location: region:3541458-3598508:-1
so has part: feature:3598404-3598508:-1:exon
so has part: feature:3569601-3569774:-1:exon
so has part: feature:3568662-3568785:-1:exon
so has part: feature:3561545-3561657:-1:exon
so has part: feature:3560581-3560774:-1:exon
so has part: feature:3560009-3560229:-1:exon
so has part: feature:3558751-3558918:-1:exon
so has part: feature:3555604-3555734:-1:exon
so has part: feature:3554839-3554913:-1:exon
so has part: feature:3553475-3553633:-1:exon
so has part: feature:3552538-3552666:-1:exon
so has part: feature:3549698-3549797:-1:exon
so has part: feature:3548159-3548311:-1:exon
so has part: feature:3546640-3546675:-1:exon
so has part: feature:3543871-3543956:-1:exon
so has part: feature:3543112-3543186:-1:exon
so has part: feature:3542659-3542814:-1:exon
so has part: feature:3541458-3541559:-1:exon

XP_032328528.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3598404-3598508:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3569601-3569774:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3568662-3568785:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3561545-3561657:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3560581-3560774:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3560009-3560229:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3558751-3558918:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3555604-3555734:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3554839-3554913:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3553475-3553633:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3552538-3552666:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3549698-3549797:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3548159-3548311:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:3546640-3546675:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:3543871-3543956:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:3543112-3543186:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:3542659-3542814:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:3541458-3541559:-1:exon

LOC116661077
type: Gene
subclass of: SO_0000704
RO_0002162: 419612
gene: LOC116661077
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(3624001..3634711)
location: region:3624001-3634711:-1
so has part: feature:3624001-3634711:-1:exon
subclass of: SO_0000011

116661077
type: Gene
SIO_000068: ncbigene

position:3624001:-1
position: 3624001
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3634711:-1
position: 3634711
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3624001-3634711:-1:exon

LOC116661077
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 419612
nc RNA class: lncRNA
gene: LOC116661077
product: uncharacterized LOC116661077, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 16 samples with support for all annotated introns
transcript id: XR_004316818.1
SIO_010081: LOC116661077
subclass of: SO_0000673
so part of: LOC116661077
location: complement(join(3624001..3625502,3633468..3634711))
location: region:3624001-3634711:-1
so has part: feature:3633468-3634711:-1:exon
so has part: feature:3624001-3625502:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3633468-3634711:-1:exon

position:3633468:-1
position: 3633468
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3624001-3625502:-1:exon

position:3625502:-1
position: 3625502
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC116661077
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 419612
nc RNA class: lncRNA
gene: LOC116661077
product: uncharacterized LOC116661077, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 12 samples with support for all annotated introns
transcript id: XR_004316817.1
SIO_010081: LOC116661077
subclass of: SO_0000673
so part of: LOC116661077
location: complement(join(3624001..3625502,3631814..3632169))
location: region:3624001-3632169:-1
so has part: feature:3631814-3632169:-1:exon
so has part: feature:3624001-3625502:-1:exon

position:3632169:-1
position: 3632169
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3631814-3632169:-1:exon

position:3631814:-1
position: 3631814
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3624001-3625502:-1:exon

PRDM10
type: Gene
subclass of: SO_0000704
RO_0002162: 419612
gene: PRDM10
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 3632197..3706478
location: region:3632197-3706478:1
so has part: feature:3632197-3706478:1:exon
subclass of: SO_0000010

102522475
type: Gene
SIO_000068: ncbigene

position:3632197:1
position: 3632197
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3706478:1
position: 3706478
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3632197-3706478:1:exon

PRDM10
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 419612
gene: PRDM10
product: PR/SET domain 10, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 14 samples with support for all annotated introns
transcript id: XM_032472262.1
SIO_010081: PRDM10
subclass of: SO_0000673
so part of: PRDM10
location: join(3632197..3632309,3637614..3637687,3653938..3654122,3656511..3656675,3658352..3658411,3665789..3666014,3667815..3668056,3669422..3669625,3672949..3673021,3675228..3675345,3677979..3678108,3678850..3679092,3684107..3684454,3685900..3686055,3690529..3690708,3691599..3691709,3692709..3692909,3693535..3693678,3694361..3694531,3695770..3695910,3698218..3698374,3701351..3701454,3703504..3706478)
location: region:3632197-3706478:1
so has part: feature:3632197-3632309:1:exon
so has part: feature:3637614-3637687:1:exon
so has part: feature:3653938-3654122:1:exon
so has part: feature:3656511-3656675:1:exon
so has part: feature:3658352-3658411:1:exon
so has part: feature:3665789-3666014:1:exon
so has part: feature:3667815-3668056:1:exon
so has part: feature:3669422-3669625:1:exon
so has part: feature:3672949-3673021:1:exon
so has part: feature:3675228-3675345:1:exon
so has part: feature:3677979-3678108:1:exon
so has part: feature:3678850-3679092:1:exon
so has part: feature:3684107-3684454:1:exon
so has part: feature:3685900-3686055:1:exon
so has part: feature:3690529-3690708:1:exon
so has part: feature:3691599-3691709:1:exon
so has part: feature:3692709-3692909:1:exon
so has part: feature:3693535-3693678:1:exon
so has part: feature:3694361-3694531:1:exon
so has part: feature:3695770-3695910:1:exon
so has part: feature:3698218-3698374:1:exon
so has part: feature:3701351-3701454:1:exon
so has part: feature:3703504-3706478:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3632197-3632309:1:exon

position:3632309:1
position: 3632309
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3637614-3637687:1:exon

position:3637614:1
position: 3637614
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3637687:1
position: 3637687
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3653938-3654122:1:exon

position:3653938:1
position: 3653938
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3654122:1
position: 3654122
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3656511-3656675:1:exon

position:3656511:1
position: 3656511
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3656675:1
position: 3656675
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:3658352-3658411:1:exon

position:3658352:1
position: 3658352
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3658411:1
position: 3658411
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:3665789-3666014:1:exon

position:3665789:1
position: 3665789
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3666014:1
position: 3666014
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:3667815-3668056:1:exon

position:3667815:1
position: 3667815
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3668056:1
position: 3668056
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:3669422-3669625:1:exon

position:3669422:1
position: 3669422
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3669625:1
position: 3669625
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:3672949-3673021:1:exon

position:3672949:1
position: 3672949
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3673021:1
position: 3673021
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:3675228-3675345:1:exon

position:3675228:1
position: 3675228
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3675345:1
position: 3675345
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:3677979-3678108:1:exon

position:3677979:1
position: 3677979
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3678108:1
position: 3678108
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:3678850-3679092:1:exon

position:3678850:1
position: 3678850
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3679092:1
position: 3679092
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:3684107-3684454:1:exon

position:3684107:1
position: 3684107
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3684454:1
position: 3684454
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:3685900-3686055:1:exon

position:3685900:1
position: 3685900
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3686055:1
position: 3686055
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:3690529-3690708:1:exon

position:3690529:1
position: 3690529
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3690708:1
position: 3690708
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:3691599-3691709:1:exon

position:3691599:1
position: 3691599
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3691709:1
position: 3691709
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:3692709-3692909:1:exon

position:3692709:1
position: 3692709
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3692909:1
position: 3692909
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:3693535-3693678:1:exon

position:3693535:1
position: 3693535
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3693678:1
position: 3693678
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:3694361-3694531:1:exon

position:3694361:1
position: 3694361
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3694531:1
position: 3694531
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:3695770-3695910:1:exon

position:3695770:1
position: 3695770
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3695910:1
position: 3695910
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:3698218-3698374:1:exon

position:3698218:1
position: 3698218
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3698374:1
position: 3698374
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:3701351-3701454:1:exon

position:3701351:1
position: 3701351
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3701454:1
position: 3701454
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:3703504-3706478:1:exon

position:3703504:1
position: 3703504
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

PRDM10
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 419612
gene: PRDM10
product: PR/SET domain 10, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XM_032472263.1
SIO_010081: PRDM10
subclass of: SO_0000673
so part of: PRDM10
location: join(3632197..3632309,3637614..3637687,3653938..3654122,3656511..3656675,3658352..3658411,3665789..3666014,3667815..3668056,3669422..3669625,3672949..3673021,3675228..3675345,3677979..3678108,3678874..3679092,3684107..3684454,3685900..3686055,3690529..3690708,3691599..3691709,3692709..3692909,3693535..3693678,3694361..3694531,3695770..3695910,3698218..3698374,3701351..3701454,3703504..3706478)
location: region:3632197-3706478:1
so has part: feature:3632197-3632309:1:exon
so has part: feature:3637614-3637687:1:exon
so has part: feature:3653938-3654122:1:exon
so has part: feature:3656511-3656675:1:exon
so has part: feature:3658352-3658411:1:exon
so has part: feature:3665789-3666014:1:exon
so has part: feature:3667815-3668056:1:exon
so has part: feature:3669422-3669625:1:exon
so has part: feature:3672949-3673021:1:exon
so has part: feature:3675228-3675345:1:exon
so has part: feature:3677979-3678108:1:exon
so has part: feature:3678874-3679092:1:exon
so has part: feature:3684107-3684454:1:exon
so has part: feature:3685900-3686055:1:exon
so has part: feature:3690529-3690708:1:exon
so has part: feature:3691599-3691709:1:exon
so has part: feature:3692709-3692909:1:exon
so has part: feature:3693535-3693678:1:exon
so has part: feature:3694361-3694531:1:exon
so has part: feature:3695770-3695910:1:exon
so has part: feature:3698218-3698374:1:exon
so has part: feature:3701351-3701454:1:exon
so has part: feature:3703504-3706478:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3632197-3632309:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3637614-3637687:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3653938-3654122:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3656511-3656675:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3658352-3658411:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3665789-3666014:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3667815-3668056:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3669422-3669625:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3672949-3673021:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3675228-3675345:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3677979-3678108:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3678874-3679092:1:exon

position:3678874:1
position: 3678874
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:3684107-3684454:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:3685900-3686055:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:3690529-3690708:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:3691599-3691709:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:3692709-3692909:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:3693535-3693678:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:3694361-3694531:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:3695770-3695910:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:3698218-3698374:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:3701351-3701454:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:3703504-3706478:1:exon

PRDM10
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 419612
gene: PRDM10
product: PR/SET domain 10, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XR_004316816.1
SIO_010081: PRDM10
so part of: PRDM10
location: join(3632197..3632309,3637614..3637687,3653938..3654122,3656511..3656675,3658352..3658411,3665789..3666014,3667815..3668056,3669422..3669625,3672949..3673021,3675228..3675345,3677979..3678108,3678850..3679092,3684107..3684454,3685900..3686055,3690529..3690708,3691599..3691709,3692709..3692909,3693535..3693678,3694361..3694663,3695770..3695903)
location: region:3632197-3695903:1
so has part: feature:3632197-3632309:1:exon
so has part: feature:3637614-3637687:1:exon
so has part: feature:3653938-3654122:1:exon
so has part: feature:3656511-3656675:1:exon
so has part: feature:3658352-3658411:1:exon
so has part: feature:3665789-3666014:1:exon
so has part: feature:3667815-3668056:1:exon
so has part: feature:3669422-3669625:1:exon
so has part: feature:3672949-3673021:1:exon
so has part: feature:3675228-3675345:1:exon
so has part: feature:3677979-3678108:1:exon
so has part: feature:3678850-3679092:1:exon
so has part: feature:3684107-3684454:1:exon
so has part: feature:3685900-3686055:1:exon
so has part: feature:3690529-3690708:1:exon
so has part: feature:3691599-3691709:1:exon
so has part: feature:3692709-3692909:1:exon
so has part: feature:3693535-3693678:1:exon
so has part: feature:3694361-3694663:1:exon
so has part: feature:3695770-3695903:1:exon

position:3695903:1
position: 3695903
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3632197-3632309:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3637614-3637687:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3653938-3654122:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3656511-3656675:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3658352-3658411:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3665789-3666014:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3667815-3668056:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3669422-3669625:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3672949-3673021:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3675228-3675345:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3677979-3678108:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3678850-3679092:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3684107-3684454:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:3685900-3686055:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:3690529-3690708:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:3691599-3691709:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:3692709-3692909:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:3693535-3693678:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:3694361-3694663:1:exon

position:3694663:1
position: 3694663
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:3695770-3695903:1:exon

PRDM10
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 419612
gene: PRDM10
product: PR/SET domain 10, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_032472265.1
SIO_010081: PRDM10
subclass of: SO_0000673
so part of: PRDM10
location: join(3632197..3632309,3637614..3637687,3653938..3654122,3656511..3656675,3658352..3658411,3665789..3666014,3667815..3668056,3669422..3669625,3672949..3673021,3675228..3675345,3677979..3678108,3678850..3679092,3684107..3684454,3685900..3686055,3690529..3690708,3691599..3691709,3692709..3692909,3693535..3693678,3694361..3694588,3695770..3695900)
location: region:3632197-3695900:1
so has part: feature:3632197-3632309:1:exon
so has part: feature:3637614-3637687:1:exon
so has part: feature:3653938-3654122:1:exon
so has part: feature:3656511-3656675:1:exon
so has part: feature:3658352-3658411:1:exon
so has part: feature:3665789-3666014:1:exon
so has part: feature:3667815-3668056:1:exon
so has part: feature:3669422-3669625:1:exon
so has part: feature:3672949-3673021:1:exon
so has part: feature:3675228-3675345:1:exon
so has part: feature:3677979-3678108:1:exon
so has part: feature:3678850-3679092:1:exon
so has part: feature:3684107-3684454:1:exon
so has part: feature:3685900-3686055:1:exon
so has part: feature:3690529-3690708:1:exon
so has part: feature:3691599-3691709:1:exon
so has part: feature:3692709-3692909:1:exon
so has part: feature:3693535-3693678:1:exon
so has part: feature:3694361-3694588:1:exon
so has part: feature:3695770-3695900:1:exon

position:3695900:1
position: 3695900
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3632197-3632309:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3637614-3637687:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3653938-3654122:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3656511-3656675:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3658352-3658411:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3665789-3666014:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3667815-3668056:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3669422-3669625:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3672949-3673021:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3675228-3675345:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3677979-3678108:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3678850-3679092:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3684107-3684454:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:3685900-3686055:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:3690529-3690708:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:3691599-3691709:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:3692709-3692909:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:3693535-3693678:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:3694361-3694588:1:exon

position:3694588:1
position: 3694588
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:3695770-3695900:1:exon

LOC116661221
type: Gene
subclass of: SO_0000704
RO_0002162: 419612
gene: LOC116661221
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: complement(3636313..3636419)
location: region:3636313-3636419:-1
so has part: feature:3636313-3636419:-1:exon
subclass of: SO_0000623

116661221
type: Gene
SIO_000068: ncbigene

position:3636313:-1
position: 3636313
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3636419:-1
position: 3636419
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3636313-3636419:-1:exon

LOC116661221
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 419612
nc RNA class: snRNA
gene: LOC116661221
product: U6 spliceosomal RNA
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00026
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_004317039.1
SIO_010081: LOC116661221
subclass of: SO_0000673
so part of: LOC116661221
location: complement(3636313..3636419)
location: region:3636313-3636419:-1
so has part: feature:3636313-3636419:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3636313-3636419:-1:exon

PRDM10
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 419612
gene: PRDM10
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: PR domain zinc finger protein 10 isoform X1
translation: MDSKDDSSHVWPPSADHEESAAQVHFVPDAGTVAQIVYADDQVRPPQQVVYTADGASYASVDGPEHTLVYIHPVEAAQTLFTDPGQVAYVQQDATAQQASLPVHNQVLPSIEGVDGSDPLATLQNPMGRLEAKEEEEEEEDEDSEDDEEEDGEDTDLDDWEPDPPRPFDPHDLWCEECNNAHSSVCPKHGPLHPIPNRPVLTRARASLPLVLYIDRFLGGVFSKRRIPKRTQFGPVEGPLVREAELKDCYIHLKVSLDKGDRKDRDLHEDLWFELSDETLCNWMMFVRPAQNHLEQNLVAYQYGHHVYYTTIKNVEPKQELKVWYAASYAEFVNQKIHDISEEERKVLREQEKNWPCYECNRRFISSEQLQQHLNSHDEKLDVFSRTRGRGRGRGKRRFGPGRRPGRPPKFIRLEITSENGEKCDDGAQDLLHFPTKEQLDEAEPATLNGLDQPEPPALPIPPLPQDPQASLEPEPEVHSLQLQPQHEESVLPAQSTLTADDMRRAKRIRNAALQHLFIRKSFRPFKCLQCGKAFREKDKLDQHLRFHGREGNCPLTCDLCNKGFISSASLESHMKLHSDQKTYSCIFCPESFDRLDLLKDHVAVHISDGYFTCPTCKKRFPDFIQVKKHVRSFHSEKIYQCTECDKAFCRPDKLRLHMLRHSDRKDFLCSTCGKQFKRKDKLREHMQRMHNPEREAKKADRISRSKTFKPRITSTDYDSFTFKCRLCMMGFRRRGMLVNHLSKRHPDMKIEEVPELTLPIIKPNRDYFCQYCDKVYKSASKRKAHILKNHPGAELPPSIRKLRPAGPGEPDPMLSTHTQLTGTIATPPVCCPHCSKQYSSKTKMVQHIRKKHPEYAQLPNTIHTPLTTAVISAAPAVLTTDSATGETVVTTDLLTQAMTELSQTLTTDYRTPQGDYQRIQYIPVSQSASGLQQPQHIQLQVVQVAPATSPHQSQQSTVDVGQLHDPQTYTQHAIQVQHIHVTEPPAPAAPTSQVAGQPLSPSPQPSQQGLSPAHIPGGSSAQGQPQGSTVQHTYLPNTWNSFRGYSSEIQMMTLPPGQFVITDSGVATPVTTGQVKAVTPGHYVLSESQPELEEKQATALSGGVQVQPAAHSDLDPQTTSQQPTQYIITTTTNGNGSSEVHISKP
SIO_010081: PRDM10
subclass of: SO_0000673
so part of: PRDM10
location: join(3654054..3654122,3656511..3656675,3658352..3658411,3665789..3666014,3667815..3668056,3669422..3669625,3672949..3673021,3675228..3675345,3677979..3678108,3678850..3679092,3684107..3684454,3685900..3686055,3690529..3690708,3691599..3691709,3692709..3692909,3693535..3693678,3694361..3694531,3695770..3695910,3698218..3698374,3701351..3701454,3703504..3703701)
location: region:3654054-3703701:1
so has part: feature:3654054-3654122:1:exon
so has part: feature:3656511-3656675:1:exon
so has part: feature:3658352-3658411:1:exon
so has part: feature:3665789-3666014:1:exon
so has part: feature:3667815-3668056:1:exon
so has part: feature:3669422-3669625:1:exon
so has part: feature:3672949-3673021:1:exon
so has part: feature:3675228-3675345:1:exon
so has part: feature:3677979-3678108:1:exon
so has part: feature:3678850-3679092:1:exon
so has part: feature:3684107-3684454:1:exon
so has part: feature:3685900-3686055:1:exon
so has part: feature:3690529-3690708:1:exon
so has part: feature:3691599-3691709:1:exon
so has part: feature:3692709-3692909:1:exon
so has part: feature:3693535-3693678:1:exon
so has part: feature:3694361-3694531:1:exon
so has part: feature:3695770-3695910:1:exon
so has part: feature:3698218-3698374:1:exon
so has part: feature:3701351-3701454:1:exon
so has part: feature:3703504-3703701:1:exon

XP_032328153.1
type: Protein
SIO_000068: ncbiprotein

position:3654054:1
position: 3654054
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3703701:1
position: 3703701
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3654054-3654122:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3656511-3656675:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3658352-3658411:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3665789-3666014:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3667815-3668056:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3669422-3669625:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3672949-3673021:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3675228-3675345:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3677979-3678108:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3678850-3679092:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3684107-3684454:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3685900-3686055:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3690529-3690708:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:3691599-3691709:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:3692709-3692909:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:3693535-3693678:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:3694361-3694531:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:3695770-3695910:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:3698218-3698374:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:3701351-3701454:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:3703504-3703701:1:exon

PRDM10
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 419612
gene: PRDM10
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: PR domain zinc finger protein 10 isoform X2
translation: MDSKDDSSHVWPPSADHEESAAQVHFVPDAGTVAQIVYADDQVRPPQQVVYTADGASYASVDGPEHTLVYIHPVEAAQTLFTDPGQVAYVQQDATAQQASLPVHNQVLPSIEGVDGSDPLATLQNPMGRLEAKEEEEEEEDEDSEDDEEEDGEDTDLDDWEPDPPRPFDPHDLWCEECNNAHSSVCPKHGPLHPIPNRPVLTRARASLPLVLYIDRFLGGVFSKRRIPKRTQFGPVEGPLVREAELKDCYIHLKVSLDKGDRKDRDLHEDLWFELSDETLCNWMMFVRPAQNHLEQNLVAYQYGHHVYYTTIKNVEPKQELKVWYAASYAEFVNQKIHDISEEERKVLREQEKNWPCYECNRRFISSEQLQQHLNSHDEKLDVFSRTRGRGRGRGKRRFGPGRRPGRPPKFIRLEITSENGEKCDDGAQEQLDEAEPATLNGLDQPEPPALPIPPLPQDPQASLEPEPEVHSLQLQPQHEESVLPAQSTLTADDMRRAKRIRNAALQHLFIRKSFRPFKCLQCGKAFREKDKLDQHLRFHGREGNCPLTCDLCNKGFISSASLESHMKLHSDQKTYSCIFCPESFDRLDLLKDHVAVHISDGYFTCPTCKKRFPDFIQVKKHVRSFHSEKIYQCTECDKAFCRPDKLRLHMLRHSDRKDFLCSTCGKQFKRKDKLREHMQRMHNPEREAKKADRISRSKTFKPRITSTDYDSFTFKCRLCMMGFRRRGMLVNHLSKRHPDMKIEEVPELTLPIIKPNRDYFCQYCDKVYKSASKRKAHILKNHPGAELPPSIRKLRPAGPGEPDPMLSTHTQLTGTIATPPVCCPHCSKQYSSKTKMVQHIRKKHPEYAQLPNTIHTPLTTAVISAAPAVLTTDSATGETVVTTDLLTQAMTELSQTLTTDYRTPQGDYQRIQYIPVSQSASGLQQPQHIQLQVVQVAPATSPHQSQQSTVDVGQLHDPQTYTQHAIQVQHIHVTEPPAPAAPTSQVAGQPLSPSPQPSQQGLSPAHIPGGSSAQGQPQGSTVQHTYLPNTWNSFRGYSSEIQMMTLPPGQFVITDSGVATPVTTGQVKAVTPGHYVLSESQPELEEKQATALSGGVQVQPAAHSDLDPQTTSQQPTQYIITTTTNGNGSSEVHISKP
SIO_010081: PRDM10
subclass of: SO_0000673
so part of: PRDM10
location: join(3654054..3654122,3656511..3656675,3658352..3658411,3665789..3666014,3667815..3668056,3669422..3669625,3672949..3673021,3675228..3675345,3677979..3678108,3678874..3679092,3684107..3684454,3685900..3686055,3690529..3690708,3691599..3691709,3692709..3692909,3693535..3693678,3694361..3694531,3695770..3695910,3698218..3698374,3701351..3701454,3703504..3703701)
location: region:3654054-3703701:1
so has part: feature:3654054-3654122:1:exon
so has part: feature:3656511-3656675:1:exon
so has part: feature:3658352-3658411:1:exon
so has part: feature:3665789-3666014:1:exon
so has part: feature:3667815-3668056:1:exon
so has part: feature:3669422-3669625:1:exon
so has part: feature:3672949-3673021:1:exon
so has part: feature:3675228-3675345:1:exon
so has part: feature:3677979-3678108:1:exon
so has part: feature:3678874-3679092:1:exon
so has part: feature:3684107-3684454:1:exon
so has part: feature:3685900-3686055:1:exon
so has part: feature:3690529-3690708:1:exon
so has part: feature:3691599-3691709:1:exon
so has part: feature:3692709-3692909:1:exon
so has part: feature:3693535-3693678:1:exon
so has part: feature:3694361-3694531:1:exon
so has part: feature:3695770-3695910:1:exon
so has part: feature:3698218-3698374:1:exon
so has part: feature:3701351-3701454:1:exon
so has part: feature:3703504-3703701:1:exon

XP_032328154.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3654054-3654122:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3656511-3656675:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3658352-3658411:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3665789-3666014:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3667815-3668056:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3669422-3669625:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3672949-3673021:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3675228-3675345:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3677979-3678108:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3678874-3679092:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3684107-3684454:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3685900-3686055:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3690529-3690708:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:3691599-3691709:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:3692709-3692909:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:3693535-3693678:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:3694361-3694531:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:3695770-3695910:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:3698218-3698374:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:3701351-3701454:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:3703504-3703701:1:exon

PRDM10
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 419612
gene: PRDM10
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: PR domain zinc finger protein 10 isoform X4
translation: MDSKDDSSHVWPPSADHEESAAQVHFVPDAGTVAQIVYADDQVRPPQQVVYTADGASYASVDGPEHTLVYIHPVEAAQTLFTDPGQVAYVQQDATAQQASLPVHNQVLPSIEGVDGSDPLATLQNPMGRLEAKEEEEEEEDEDSEDDEEEDGEDTDLDDWEPDPPRPFDPHDLWCEECNNAHSSVCPKHGPLHPIPNRPVLTRARASLPLVLYIDRFLGGVFSKRRIPKRTQFGPVEGPLVREAELKDCYIHLKVSLDKGDRKDRDLHEDLWFELSDETLCNWMMFVRPAQNHLEQNLVAYQYGHHVYYTTIKNVEPKQELKVWYAASYAEFVNQKIHDISEEERKVLREQEKNWPCYECNRRFISSEQLQQHLNSHDEKLDVFSRTRGRGRGRGKRRFGPGRRPGRPPKFIRLEITSENGEKCDDGAQDLLHFPTKEQLDEAEPATLNGLDQPEPPALPIPPLPQDPQASLEPEPEVHSLQLQPQHEESVLPAQSTLTADDMRRAKRIRNAALQHLFIRKSFRPFKCLQCGKAFREKDKLDQHLRFHGREGNCPLTCDLCNKGFISSASLESHMKLHSDQKTYSCIFCPESFDRLDLLKDHVAVHISDGYFTCPTCKKRFPDFIQVKKHVRSFHSEKIYQCTECDKAFCRPDKLRLHMLRHSDRKDFLCSTCGKQFKRKDKLREHMQRMHNPEREAKKADRISRSKTFKPRITSTDYDSFTFKCRLCMMGFRRRGMLVNHLSKRHPDMKIEEVPELTLPIIKPNRDYFCQYCDKVYKSASKRKAHILKNHPGAELPPSIRKLRPAGPGEPDPMLSTHTQLTGTIATPPVCCPHCSKQYSSKTKMVQHIRKKHPEYAQLPNTIHTPLTTAVISAAPAVLTTDSATGETVVTTDLLTQAMTELSQTLTTDYRTPQGDYQRIQYIPVSQSASGLQQPQHIQLQVVQVAPVLSCGSFPLPA
SIO_010081: PRDM10
subclass of: SO_0000673
so part of: PRDM10
location: join(3654054..3654122,3656511..3656675,3658352..3658411,3665789..3666014,3667815..3668056,3669422..3669625,3672949..3673021,3675228..3675345,3677979..3678108,3678850..3679092,3684107..3684454,3685900..3686055,3690529..3690708,3691599..3691709,3692709..3692909,3693535..3693678,3694361..3694567)
location: region:3654054-3694567:1
so has part: feature:3654054-3654122:1:exon
so has part: feature:3656511-3656675:1:exon
so has part: feature:3658352-3658411:1:exon
so has part: feature:3665789-3666014:1:exon
so has part: feature:3667815-3668056:1:exon
so has part: feature:3669422-3669625:1:exon
so has part: feature:3672949-3673021:1:exon
so has part: feature:3675228-3675345:1:exon
so has part: feature:3677979-3678108:1:exon
so has part: feature:3678850-3679092:1:exon
so has part: feature:3684107-3684454:1:exon
so has part: feature:3685900-3686055:1:exon
so has part: feature:3690529-3690708:1:exon
so has part: feature:3691599-3691709:1:exon
so has part: feature:3692709-3692909:1:exon
so has part: feature:3693535-3693678:1:exon
so has part: feature:3694361-3694567:1:exon

XP_032328156.1
type: Protein
SIO_000068: ncbiprotein

position:3694567:1
position: 3694567
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3654054-3654122:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3656511-3656675:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3658352-3658411:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3665789-3666014:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3667815-3668056:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3669422-3669625:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3672949-3673021:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3675228-3675345:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3677979-3678108:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3678850-3679092:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3684107-3684454:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3685900-3686055:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3690529-3690708:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:3691599-3691709:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:3692709-3692909:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:3693535-3693678:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:3694361-3694567:1:exon

PRDM10
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 419612
gene: PRDM10
product: PR/SET domain 10, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_032472264.1
SIO_010081: PRDM10
subclass of: SO_0000673
so part of: PRDM10
location: join(3656641..3656703,3658352..3658411,3665789..3666014,3667815..3668056,3669422..3669625,3672949..3673021,3675228..3675345,3677979..3678108,3678850..3679092,3684107..3684454,3685900..3686055,3690529..3690708,3691599..3691709,3692709..3692909,3693535..3693678,3694361..3694531,3695770..3695910,3698218..3698374,3701351..3701454,3703504..3706478)
location: region:3656641-3706478:1
so has part: feature:3656641-3656703:1:exon
so has part: feature:3658352-3658411:1:exon
so has part: feature:3665789-3666014:1:exon
so has part: feature:3667815-3668056:1:exon
so has part: feature:3669422-3669625:1:exon
so has part: feature:3672949-3673021:1:exon
so has part: feature:3675228-3675345:1:exon
so has part: feature:3677979-3678108:1:exon
so has part: feature:3678850-3679092:1:exon
so has part: feature:3684107-3684454:1:exon
so has part: feature:3685900-3686055:1:exon
so has part: feature:3690529-3690708:1:exon
so has part: feature:3691599-3691709:1:exon
so has part: feature:3692709-3692909:1:exon
so has part: feature:3693535-3693678:1:exon
so has part: feature:3694361-3694531:1:exon
so has part: feature:3695770-3695910:1:exon
so has part: feature:3698218-3698374:1:exon
so has part: feature:3701351-3701454:1:exon
so has part: feature:3703504-3706478:1:exon

position:3656641:1
position: 3656641
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3656641-3656703:1:exon

position:3656703:1
position: 3656703
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3658352-3658411:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3665789-3666014:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3667815-3668056:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3669422-3669625:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3672949-3673021:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3675228-3675345:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3677979-3678108:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3678850-3679092:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3684107-3684454:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3685900-3686055:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3690529-3690708:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3691599-3691709:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:3692709-3692909:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:3693535-3693678:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:3694361-3694531:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:3695770-3695910:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:3698218-3698374:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:3701351-3701454:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:3703504-3706478:1:exon

PRDM10
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 419612
gene: PRDM10
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: PR domain zinc finger protein 10 isoform X3
translation: MGRLEAKEEEEEEEDEDSEDDEEEDGEDTDLDDWEPDPPRPFDPHDLWCEECNNAHSSVCPKHGPLHPIPNRPVLTRARASLPLVLYIDRFLGGVFSKRRIPKRTQFGPVEGPLVREAELKDCYIHLKVSLDKGDRKDRDLHEDLWFELSDETLCNWMMFVRPAQNHLEQNLVAYQYGHHVYYTTIKNVEPKQELKVWYAASYAEFVNQKIHDISEEERKVLREQEKNWPCYECNRRFISSEQLQQHLNSHDEKLDVFSRTRGRGRGRGKRRFGPGRRPGRPPKFIRLEITSENGEKCDDGAQDLLHFPTKEQLDEAEPATLNGLDQPEPPALPIPPLPQDPQASLEPEPEVHSLQLQPQHEESVLPAQSTLTADDMRRAKRIRNAALQHLFIRKSFRPFKCLQCGKAFREKDKLDQHLRFHGREGNCPLTCDLCNKGFISSASLESHMKLHSDQKTYSCIFCPESFDRLDLLKDHVAVHISDGYFTCPTCKKRFPDFIQVKKHVRSFHSEKIYQCTECDKAFCRPDKLRLHMLRHSDRKDFLCSTCGKQFKRKDKLREHMQRMHNPEREAKKADRISRSKTFKPRITSTDYDSFTFKCRLCMMGFRRRGMLVNHLSKRHPDMKIEEVPELTLPIIKPNRDYFCQYCDKVYKSASKRKAHILKNHPGAELPPSIRKLRPAGPGEPDPMLSTHTQLTGTIATPPVCCPHCSKQYSSKTKMVQHIRKKHPEYAQLPNTIHTPLTTAVISAAPAVLTTDSATGETVVTTDLLTQAMTELSQTLTTDYRTPQGDYQRIQYIPVSQSASGLQQPQHIQLQVVQVAPATSPHQSQQSTVDVGQLHDPQTYTQHAIQVQHIHVTEPPAPAAPTSQVAGQPLSPSPQPSQQGLSPAHIPGGSSAQGQPQGSTVQHTYLPNTWNSFRGYSSEIQMMTLPPGQFVITDSGVATPVTTGQVKAVTPGHYVLSESQPELEEKQATALSGGVQVQPAAHSDLDPQTTSQQPTQYIITTTTNGNGSSEVHISKP
SIO_010081: PRDM10
subclass of: SO_0000673
so part of: PRDM10
location: join(3665873..3666014,3667815..3668056,3669422..3669625,3672949..3673021,3675228..3675345,3677979..3678108,3678850..3679092,3684107..3684454,3685900..3686055,3690529..3690708,3691599..3691709,3692709..3692909,3693535..3693678,3694361..3694531,3695770..3695910,3698218..3698374,3701351..3701454,3703504..3703701)
location: region:3665873-3703701:1
so has part: feature:3665873-3666014:1:exon
so has part: feature:3667815-3668056:1:exon
so has part: feature:3669422-3669625:1:exon
so has part: feature:3672949-3673021:1:exon
so has part: feature:3675228-3675345:1:exon
so has part: feature:3677979-3678108:1:exon
so has part: feature:3678850-3679092:1:exon
so has part: feature:3684107-3684454:1:exon
so has part: feature:3685900-3686055:1:exon
so has part: feature:3690529-3690708:1:exon
so has part: feature:3691599-3691709:1:exon
so has part: feature:3692709-3692909:1:exon
so has part: feature:3693535-3693678:1:exon
so has part: feature:3694361-3694531:1:exon
so has part: feature:3695770-3695910:1:exon
so has part: feature:3698218-3698374:1:exon
so has part: feature:3701351-3701454:1:exon
so has part: feature:3703504-3703701:1:exon

XP_032328155.1
type: Protein
SIO_000068: ncbiprotein

position:3665873:1
position: 3665873
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3665873-3666014:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3667815-3668056:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3669422-3669625:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3672949-3673021:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3675228-3675345:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3677979-3678108:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3678850-3679092:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3684107-3684454:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3685900-3686055:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3690529-3690708:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3691599-3691709:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3692709-3692909:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3693535-3693678:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:3694361-3694531:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:3695770-3695910:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:3698218-3698374:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:3701351-3701454:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:3703504-3703701:1:exon

LOC116661223
type: Gene
subclass of: SO_0000704
RO_0002162: 419612
gene: LOC116661223
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: complement(3689444..3689550)
location: region:3689444-3689550:-1
so has part: feature:3689444-3689550:-1:exon
subclass of: SO_0000623

116661223
type: Gene
SIO_000068: ncbigene

position:3689444:-1
position: 3689444
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3689550:-1
position: 3689550
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3689444-3689550:-1:exon

LOC116661223
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 419612
nc RNA class: snRNA
gene: LOC116661223
product: U6 spliceosomal RNA
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00026
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_004317041.1
SIO_010081: LOC116661223
subclass of: SO_0000673
so part of: LOC116661223
location: complement(3689444..3689550)
location: region:3689444-3689550:-1
so has part: feature:3689444-3689550:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3689444-3689550:-1:exon

NFRKB
type: Gene
subclass of: SO_0000704
RO_0002162: 419612
gene: NFRKB
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 3707431..3739562
location: region:3707431-3739562:1
so has part: feature:3707431-3739562:1:exon
subclass of: SO_0000010

102522225
type: Gene
SIO_000068: ncbigene

position:3707431:1
position: 3707431
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3739562:1
position: 3739562
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3707431-3739562:1:exon

NFRKB
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 419612
gene: NFRKB
product: nuclear factor related to kappaB binding protein
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_032472542.1
SIO_010081: NFRKB
subclass of: SO_0000673
so part of: NFRKB
location: join(3707431..3707538,3709792..3709947,3712356..3712557,3714549..3714676,3715322..3715496,3715932..3716093,3716638..3716711,3717461..3717545,3717904..3718084,3718315..3718423,3718652..3718778,3719004..3719069,3722313..3722392,3722482..3722528,3723772..3723832,3724229..3724403,3725276..3725382,3725749..3725872,3726051..3726130,3726252..3726472,3726572..3726824,3727243..3727455,3730422..3731189,3734018..3734124,3735292..3735427,3735521..3739562)
location: region:3707431-3739562:1
so has part: feature:3707431-3707538:1:exon
so has part: feature:3709792-3709947:1:exon
so has part: feature:3712356-3712557:1:exon
so has part: feature:3714549-3714676:1:exon
so has part: feature:3715322-3715496:1:exon
so has part: feature:3715932-3716093:1:exon
so has part: feature:3716638-3716711:1:exon
so has part: feature:3717461-3717545:1:exon
so has part: feature:3717904-3718084:1:exon
so has part: feature:3718315-3718423:1:exon
so has part: feature:3718652-3718778:1:exon
so has part: feature:3719004-3719069:1:exon
so has part: feature:3722313-3722392:1:exon
so has part: feature:3722482-3722528:1:exon
so has part: feature:3723772-3723832:1:exon
so has part: feature:3724229-3724403:1:exon
so has part: feature:3725276-3725382:1:exon
so has part: feature:3725749-3725872:1:exon
so has part: feature:3726051-3726130:1:exon
so has part: feature:3726252-3726472:1:exon
so has part: feature:3726572-3726824:1:exon
so has part: feature:3727243-3727455:1:exon
so has part: feature:3730422-3731189:1:exon
so has part: feature:3734018-3734124:1:exon
so has part: feature:3735292-3735427:1:exon
so has part: feature:3735521-3739562:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3707431-3707538:1:exon

position:3707538:1
position: 3707538
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3709792-3709947:1:exon

position:3709792:1
position: 3709792
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3709947:1
position: 3709947
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3712356-3712557:1:exon

position:3712356:1
position: 3712356
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3712557:1
position: 3712557
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3714549-3714676:1:exon

position:3714549:1
position: 3714549
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3714676:1
position: 3714676
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:3715322-3715496:1:exon

position:3715322:1
position: 3715322
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3715496:1
position: 3715496
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:3715932-3716093:1:exon

position:3715932:1
position: 3715932
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3716093:1
position: 3716093
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:3716638-3716711:1:exon

position:3716638:1
position: 3716638
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3716711:1
position: 3716711
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:3717461-3717545:1:exon

position:3717461:1
position: 3717461
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3717545:1
position: 3717545
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:3717904-3718084:1:exon

position:3717904:1
position: 3717904
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3718084:1
position: 3718084
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:3718315-3718423:1:exon

position:3718315:1
position: 3718315
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3718423:1
position: 3718423
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:3718652-3718778:1:exon

position:3718652:1
position: 3718652
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3718778:1
position: 3718778
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:3719004-3719069:1:exon

position:3719004:1
position: 3719004
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3719069:1
position: 3719069
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:3722313-3722392:1:exon

position:3722313:1
position: 3722313
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3722392:1
position: 3722392
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:3722482-3722528:1:exon

position:3722482:1
position: 3722482
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3722528:1
position: 3722528
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:3723772-3723832:1:exon

position:3723772:1
position: 3723772
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3723832:1
position: 3723832
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:3724229-3724403:1:exon

position:3724229:1
position: 3724229
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3724403:1
position: 3724403
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:3725276-3725382:1:exon

position:3725276:1
position: 3725276
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3725382:1
position: 3725382
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:3725749-3725872:1:exon

position:3725749:1
position: 3725749
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3725872:1
position: 3725872
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:3726051-3726130:1:exon

position:3726051:1
position: 3726051
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3726130:1
position: 3726130
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:3726252-3726472:1:exon

position:3726252:1
position: 3726252
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3726472:1
position: 3726472
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:3726572-3726824:1:exon

position:3726572:1
position: 3726572
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3726824:1
position: 3726824
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:3727243-3727455:1:exon

position:3727243:1
position: 3727243
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3727455:1
position: 3727455
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:3730422-3731189:1:exon

position:3730422:1
position: 3730422
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3731189:1
position: 3731189
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:3734018-3734124:1:exon

position:3734018:1
position: 3734018
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3734124:1
position: 3734124
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:3735292-3735427:1:exon

position:3735292:1
position: 3735292
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3735427:1
position: 3735427
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 26
SIO_000628: feature:3735521-3739562:1:exon

position:3735521:1
position: 3735521
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

NFRKB
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 419612
gene: NFRKB
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: substituted 2 bases at 2 genomic stop codons; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
transl except: (pos:3716072..3716074,aa:OTHER)
transl except: (pos:3716078..3716080,aa:OTHER)
product: LOW QUALITY PROTEIN: nuclear factor related to kappa-B-binding protein
translation: MDSLDHMLTDPLELGPCGDGHGTRIMEDCLLGGTRVSLPEDLLEDPEIFFDVVSLSTWREVLSDCQREHLQQFLPHFPEDGIQQQNQLILALFSGENFRFGNPLHIAQKLFRDGHFNPEVVKYRQLCFKSQYKRYLSSQQQYFHRLLRQILASRNDLLEMARRSGPAPPCRQKRPSPSRTPEEREWRTQQRYLKVLREVKEECGDTALSSDEEATLDLQEKFSFEDLSSWLPSSPARSPSPAVPLRVVPTLCTTDMKTCRXAXAAAVDKLELGESDLKVMLRKHHEKRKYQPDHPDLLTGDLTLSDIMMRVNAGRKGSLAALYDLAVLKKKVKEKEERKKKKIKMIKSETEDLVEPLSSAEGLPPLSQAPSPLAIPVIKEEPLEDLKPCLGINEISSSFFSLLLEILLLEGQTSLPMLEERVLDWQSSPASSLNSWFSAAPNWAELVLPALQCLAGESRAMPSGFSPFVEFKEKTQQWKLLGQSQDNEKELAALFQLWLETKDQAFCKQENEDSSDATMPVPRVRTDYVVRPSTGEEKRAFQEQERYRYSQPHKAFTFRMHGFESVVGPVKGVFDKETSLNKAREHSLLRSDRPAYVTILSLVRDAAARLPNGEGTRAEICELLKDSQFLAPDVTSTQVNTVVSGALDRLHYEKDPCVKYDIGRKLWIYLHRDRSEEEFERIHQAQAAAAKARKALQQKPKPPSKVKSSSKESSVKVLGGGPSEQSQMSLSDSSMPPTPVTPVTPTTPALPATPISPPPVSSVNKSGPTAVSEPAKSSSGVLLVSSPTMPQLGTMLSPASSQTPPSSQAAARVVSHTGSAGLPQVRVMAQPGLPAVNQQSAGPAPTLPQIRVPATATQTKVVPQTVMATVPVKAQTAASTVQRPGPGPAGLTVTSLPAAANPVSKPATSSPGSSAQGAPTAAVIQNVTGQNIIKQVAITGQLGVKPQAGSSVPLTAANFRIQGKDVLRLPPSSITTDAKGQTVLRITPDMMATLAKSQVTTVKLTQDLFGTGSGTAGKGISATLHVTSNPVHAADSPAKASPASVPSSTPTGTTVVKVTPDLKPTEASGSAFRLMPALGVSVADQKGKTTVASSEAKPAATIRIVQGLGVMPPKAGQTITVAAHAKQGSSVASGSGTVHTSAVSLPSVNAATSKTVAVASGSASSPISIGTGAPAVRQVPVSTTVVSTSQAGKLPTRITVPLSVISQPMKGKSVVTAPIIKGNLGANLSGLGRNIILTTMPAGTKLIAGNKPVSFLTAQQLQQLQQQGQATQVRIQTVPASHLQPGTASGSSKAVSTVVVTTAPSPKQAPDQQ
SIO_010081: NFRKB
subclass of: SO_0000673
so part of: NFRKB
location: join(3709813..3709947,3712356..3712557,3714549..3714676,3715322..3715496,3715932..3716093,3716638..3716711,3717461..3717545,3717904..3718084,3718315..3718423,3718652..3718778,3719004..3719069,3722313..3722392,3722482..3722528,3723772..3723832,3724229..3724403,3725276..3725382,3725749..3725872,3726051..3726130,3726252..3726472,3726572..3726824,3727243..3727455,3730422..3731189,3734018..3734124,3735292..3735427,3735521..3735646)
location: region:3709813-3735646:1
so has part: feature:3709813-3709947:1:exon
so has part: feature:3712356-3712557:1:exon
so has part: feature:3714549-3714676:1:exon
so has part: feature:3715322-3715496:1:exon
so has part: feature:3715932-3716093:1:exon
so has part: feature:3716638-3716711:1:exon
so has part: feature:3717461-3717545:1:exon
so has part: feature:3717904-3718084:1:exon
so has part: feature:3718315-3718423:1:exon
so has part: feature:3718652-3718778:1:exon
so has part: feature:3719004-3719069:1:exon
so has part: feature:3722313-3722392:1:exon
so has part: feature:3722482-3722528:1:exon
so has part: feature:3723772-3723832:1:exon
so has part: feature:3724229-3724403:1:exon
so has part: feature:3725276-3725382:1:exon
so has part: feature:3725749-3725872:1:exon
so has part: feature:3726051-3726130:1:exon
so has part: feature:3726252-3726472:1:exon
so has part: feature:3726572-3726824:1:exon
so has part: feature:3727243-3727455:1:exon
so has part: feature:3730422-3731189:1:exon
so has part: feature:3734018-3734124:1:exon
so has part: feature:3735292-3735427:1:exon
so has part: feature:3735521-3735646:1:exon

XP_032328433.1
type: Protein
SIO_000068: ncbiprotein

position:3709813:1
position: 3709813
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3735646:1
position: 3735646
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3709813-3709947:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3712356-3712557:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3714549-3714676:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3715322-3715496:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3715932-3716093:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3716638-3716711:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3717461-3717545:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3717904-3718084:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3718315-3718423:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3718652-3718778:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3719004-3719069:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3722313-3722392:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3722482-3722528:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:3723772-3723832:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:3724229-3724403:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:3725276-3725382:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:3725749-3725872:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:3726051-3726130:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:3726252-3726472:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:3726572-3726824:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:3727243-3727455:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:3730422-3731189:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:3734018-3734124:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:3735292-3735427:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:3735521-3735646:1:exon

TMEM45B
type: Gene
subclass of: SO_0000704
RO_0002162: 419612
gene: TMEM45B
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(3739279..3765658)
location: region:3739279-3765658:-1
so has part: feature:3739279-3765658:-1:exon
subclass of: SO_0000010

102521973
type: Gene
SIO_000068: ncbigene

position:3739279:-1
position: 3739279
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3765658:-1
position: 3765658
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3739279-3765658:-1:exon

TMEM45B
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 419612
gene: TMEM45B
product: transmembrane protein 45B, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 28 samples with support for all annotated introns
transcript id: XM_032472538.1
SIO_010081: TMEM45B
subclass of: SO_0000673
so part of: TMEM45B
location: complement(join(3739279..3740045,3741060..3741205,3741692..3741876,3742678..3742884,3744738..3744934,3765508..3765658))
location: region:3739279-3765658:-1
so has part: feature:3765508-3765658:-1:exon
so has part: feature:3744738-3744934:-1:exon
so has part: feature:3742678-3742884:-1:exon
so has part: feature:3741692-3741876:-1:exon
so has part: feature:3741060-3741205:-1:exon
so has part: feature:3739279-3740045:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3765508-3765658:-1:exon

position:3765508:-1
position: 3765508
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3744738-3744934:-1:exon

position:3744738:-1
position: 3744738
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3744934:-1
position: 3744934
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3742678-3742884:-1:exon

position:3742678:-1
position: 3742678
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3742884:-1
position: 3742884
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3741692-3741876:-1:exon

position:3741692:-1
position: 3741692
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3741876:-1
position: 3741876
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:3741060-3741205:-1:exon

position:3741060:-1
position: 3741060
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3741205:-1
position: 3741205
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:3739279-3740045:-1:exon

position:3740045:-1
position: 3740045
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

TMEM45B
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 419612
gene: TMEM45B
product: transmembrane protein 45B, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 29 samples with support for all annotated introns
transcript id: XM_006181717.3
SIO_010081: TMEM45B
subclass of: SO_0000673
so part of: TMEM45B
location: complement(join(3739279..3740045,3741060..3741205,3741692..3741876,3742678..3742884,3744738..3745533))
location: region:3739279-3745533:-1
so has part: feature:3744738-3745533:-1:exon
so has part: feature:3742678-3742884:-1:exon
so has part: feature:3741692-3741876:-1:exon
so has part: feature:3741060-3741205:-1:exon
so has part: feature:3739279-3740045:-1:exon

position:3745533:-1
position: 3745533
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3744738-3745533:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3742678-3742884:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3741692-3741876:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3741060-3741205:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3739279-3740045:-1:exon

TMEM45B
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 419612
gene: TMEM45B
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transmembrane protein 45B isoform X1
translation: MYCVSCRNIHMFFPPFSHLTIVSLLFRCPWTVMANFKGHALPGSFFLIVGLWWSVKYPLKYFHRKGKSSQLTHYYQRLEITEAAIRTLFSVIGVLAEQFVPDGPHLHLSQESHWVKLMNWQHSTMYLFFAASGVADMLTYLSAHTPVGLDRLVMAVAVFNEGFLFYYHVHNRPPLDQHIHSLLLYAVFGGALSIALEVILRDNIVLELFRTSLAILQGTWFWQIGFVLFPPFGGPEWDQSDHNNIMFITMCFSWHYLAALCTVAISYSLVHCFLTRVKRHGEREIIGIQKLKSDHTYQTALLGGSDED
SIO_010081: TMEM45B
subclass of: SO_0000673
so part of: TMEM45B
location: complement(join(3739934..3740045,3741060..3741205,3741692..3741876,3742678..3742884,3744738..3745014))
location: region:3739934-3745014:-1
so has part: feature:3744738-3745014:-1:exon
so has part: feature:3742678-3742884:-1:exon
so has part: feature:3741692-3741876:-1:exon
so has part: feature:3741060-3741205:-1:exon
so has part: feature:3739934-3740045:-1:exon

XP_006181779.2
type: Protein
SIO_000068: ncbiprotein

position:3739934:-1
position: 3739934
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3745014:-1
position: 3745014
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3744738-3745014:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3742678-3742884:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3741692-3741876:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3741060-3741205:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3739934-3740045:-1:exon

TMEM45B
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 419612
gene: TMEM45B
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transmembrane protein 45B isoform X2
translation: MANFKGHALPGSFFLIVGLWWSVKYPLKYFHRKGKSSQLTHYYQRLEITEAAIRTLFSVIGVLAEQFVPDGPHLHLSQESHWVKLMNWQHSTMYLFFAASGVADMLTYLSAHTPVGLDRLVMAVAVFNEGFLFYYHVHNRPPLDQHIHSLLLYAVFGGALSIALEVILRDNIVLELFRTSLAILQGTWFWQIGFVLFPPFGGPEWDQSDHNNIMFITMCFSWHYLAALCTVAISYSLVHCFLTRVKRHGEREIIGIQKLKSDHTYQTALLGGSDED
SIO_010081: TMEM45B
subclass of: SO_0000673
so part of: TMEM45B
location: complement(join(3739934..3740045,3741060..3741205,3741692..3741876,3742678..3742884,3744738..3744918))
location: region:3739934-3744918:-1
so has part: feature:3744738-3744918:-1:exon
so has part: feature:3742678-3742884:-1:exon
so has part: feature:3741692-3741876:-1:exon
so has part: feature:3741060-3741205:-1:exon
so has part: feature:3739934-3740045:-1:exon

XP_032328429.1
type: Protein
SIO_000068: ncbiprotein

position:3744918:-1
position: 3744918
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3744738-3744918:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3742678-3742884:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3741692-3741876:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3741060-3741205:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3739934-3740045:-1:exon

TRNAT-AGU
type: Gene
subclass of: SO_0000704
RO_0002162: 419612
gene: TRNAT-AGU
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
so part of: sequence
location: complement(3783671..3783742)
location: region:3783671-3783742:-1
so has part: feature:3783671-3783742:-1:exon
subclass of: SO_0000663

116661239
type: Gene
SIO_000068: ncbigene

position:3783671:-1
position: 3783671
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3783742:-1
position: 3783742
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3783671-3783742:-1:exon

TRNAT-AGU
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 419612
gene: TRNAT-AGU
product: tRNA-Thr
inference: COORDINATES: profile:tRNAscan-SE:1.23
note: transfer RNA threonine (anticodon AGU); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:complement(3783708..3783710),aa:Thr, seq:agt)
SIO_010081: TRNAT-AGU
subclass of: SO_0000673
so part of: TRNAT-AGU
location: complement(3783671..3783742)
location: region:3783671-3783742:-1
so has part: feature:3783671-3783742:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3783671-3783742:-1:exon

LOC116661229
type: Gene
subclass of: SO_0000704
RO_0002162: 419612
gene: LOC116661229
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: 3804749..3804810
location: region:3804749-3804810:1
so has part: feature:3804749-3804810:1:exon
subclass of: SO_0000623

116661229
type: Gene
SIO_000068: ncbigene

position:3804749:1
position: 3804749
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3804810:1
position: 3804810
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3804749-3804810:1:exon

LOC116661229
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 419612
nc RNA class: snRNA
gene: LOC116661229
product: U7 small nuclear RNA
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00066
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_004317047.1
SIO_010081: LOC116661229
subclass of: SO_0000673
so part of: LOC116661229
location: 3804749..3804810
location: region:3804749-3804810:1
so has part: feature:3804749-3804810:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3804749-3804810:1:exon

LOC106729238
type: Gene
subclass of: SO_0000704
RO_0002162: 419612
gene: LOC106729238
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 3853402..3927762
location: region:3853402-3927762:1
so has part: feature:3853402-3927762:1:exon
subclass of: SO_0000011

106729238
type: Gene
SIO_000068: ncbigene

position:3853402:1
position: 3853402
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3927762:1
position: 3927762
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3853402-3927762:1:exon

LOC106729238
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 419612
nc RNA class: lncRNA
gene: LOC106729238
product: uncharacterized LOC106729238, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XR_004316949.1
SIO_010081: LOC106729238
subclass of: SO_0000673
so part of: LOC106729238
location: join(3853402..3857763,3857897..3857998,3858548..3858701,3861395..3861511,3870511..3870654,3924016..3924174,3927290..3927762)
location: region:3853402-3927762:1
so has part: feature:3853402-3857763:1:exon
so has part: feature:3857897-3857998:1:exon
so has part: feature:3858548-3858701:1:exon
so has part: feature:3861395-3861511:1:exon
so has part: feature:3870511-3870654:1:exon
so has part: feature:3924016-3924174:1:exon
so has part: feature:3927290-3927762:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3853402-3857763:1:exon

position:3857763:1
position: 3857763
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3857897-3857998:1:exon

position:3857897:1
position: 3857897
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3857998:1
position: 3857998
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3858548-3858701:1:exon

position:3858548:1
position: 3858548
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3858701:1
position: 3858701
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3861395-3861511:1:exon

position:3861395:1
position: 3861395
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3861511:1
position: 3861511
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:3870511-3870654:1:exon

position:3870511:1
position: 3870511
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3870654:1
position: 3870654
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:3924016-3924174:1:exon

position:3924016:1
position: 3924016
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3924174:1
position: 3924174
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:3927290-3927762:1:exon

position:3927290:1
position: 3927290
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC106729238
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 419612
nc RNA class: lncRNA
gene: LOC106729238
product: uncharacterized LOC106729238, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XR_004316948.1
SIO_010081: LOC106729238
subclass of: SO_0000673
so part of: LOC106729238
location: join(3857820..3857998,3858548..3858701,3861395..3861511,3870511..3870654,3924016..3924174,3927290..3927762)
location: region:3857820-3927762:1
so has part: feature:3857820-3857998:1:exon
so has part: feature:3858548-3858701:1:exon
so has part: feature:3861395-3861511:1:exon
so has part: feature:3870511-3870654:1:exon
so has part: feature:3924016-3924174:1:exon
so has part: feature:3927290-3927762:1:exon

position:3857820:1
position: 3857820
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3857820-3857998:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3858548-3858701:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3861395-3861511:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3870511-3870654:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3924016-3924174:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3927290-3927762:1:exon

LOC106729238
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 419612
nc RNA class: lncRNA
gene: LOC106729238
product: uncharacterized LOC106729238, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XR_004316950.1
SIO_010081: LOC106729238
subclass of: SO_0000673
so part of: LOC106729238
location: join(3859266..3859390,3861395..3861511,3870511..3870654,3924016..3924174,3927290..3927762)
location: region:3859266-3927762:1
so has part: feature:3859266-3859390:1:exon
so has part: feature:3861395-3861511:1:exon
so has part: feature:3870511-3870654:1:exon
so has part: feature:3924016-3924174:1:exon
so has part: feature:3927290-3927762:1:exon

position:3859266:1
position: 3859266
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3859266-3859390:1:exon

position:3859390:1
position: 3859390
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3861395-3861511:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3870511-3870654:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3924016-3924174:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3927290-3927762:1:exon

LOC106729238
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 419612
nc RNA class: lncRNA
gene: LOC106729238
product: uncharacterized LOC106729238, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XR_004316951.1
SIO_010081: LOC106729238
subclass of: SO_0000673
so part of: LOC106729238
location: join(3860966..3861084,3861395..3861511,3870511..3870654,3924016..3924174,3927290..3927762)
location: region:3860966-3927762:1
so has part: feature:3860966-3861084:1:exon
so has part: feature:3861395-3861511:1:exon
so has part: feature:3870511-3870654:1:exon
so has part: feature:3924016-3924174:1:exon
so has part: feature:3927290-3927762:1:exon

position:3860966:1
position: 3860966
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3860966-3861084:1:exon

position:3861084:1
position: 3861084
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3861395-3861511:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3870511-3870654:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3924016-3924174:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3927290-3927762:1:exon

LOC116661171
type: Gene
subclass of: SO_0000704
RO_0002162: 419612
gene: LOC116661171
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(3874316..3900135)
location: region:3874316-3900135:-1
so has part: feature:3874316-3900135:-1:exon
subclass of: SO_0000011

116661171
type: Gene
SIO_000068: ncbigene

position:3874316:-1
position: 3874316
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3900135:-1
position: 3900135
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3874316-3900135:-1:exon

LOC116661171
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 419612
nc RNA class: lncRNA
gene: LOC116661171
product: uncharacterized LOC116661171
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XR_004316954.1
SIO_010081: LOC116661171
subclass of: SO_0000673
so part of: LOC116661171
location: complement(join(3874316..3874442,3896058..3896060,3900122..3900135))
location: region:3874316-3900135:-1
so has part: feature:3900122-3900135:-1:exon
so has part: feature:3896058-3896060:-1:exon
so has part: feature:3874316-3874442:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3900122-3900135:-1:exon

position:3900122:-1
position: 3900122
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3896058-3896060:-1:exon

position:3896058:-1
position: 3896058
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3896060:-1
position: 3896060
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3874316-3874442:-1:exon

position:3874442:-1
position: 3874442
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC116661170
type: Gene
subclass of: SO_0000704
RO_0002162: 419612
gene: LOC116661170
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(3889751..3895538)
location: region:3889751-3895538:-1
so has part: feature:3889751-3895538:-1:exon
subclass of: SO_0000011

116661170
type: Gene
SIO_000068: ncbigene

position:3889751:-1
position: 3889751
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3895538:-1
position: 3895538
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3889751-3895538:-1:exon

LOC116661170
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 419612
nc RNA class: lncRNA
gene: LOC116661170
product: uncharacterized LOC116661170, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XR_004316953.1
SIO_010081: LOC116661170
subclass of: SO_0000673
so part of: LOC116661170
location: complement(join(3889751..3890996,3891167..3891311,3892031..3892348,3895224..3895538))
location: region:3889751-3895538:-1
so has part: feature:3895224-3895538:-1:exon
so has part: feature:3892031-3892348:-1:exon
so has part: feature:3891167-3891311:-1:exon
so has part: feature:3889751-3890996:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3895224-3895538:-1:exon

position:3895224:-1
position: 3895224
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3892031-3892348:-1:exon

position:3892031:-1
position: 3892031
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3892348:-1
position: 3892348
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3891167-3891311:-1:exon

position:3891167:-1
position: 3891167
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3891311:-1
position: 3891311
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3889751-3890996:-1:exon

position:3890996:-1
position: 3890996
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC116661170
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 419612
nc RNA class: lncRNA
gene: LOC116661170
product: uncharacterized LOC116661170, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XR_004316952.1
SIO_010081: LOC116661170
subclass of: SO_0000673
so part of: LOC116661170
location: complement(join(3891009..3891311,3892031..3892348,3895224..3895538))
location: region:3891009-3895538:-1
so has part: feature:3895224-3895538:-1:exon
so has part: feature:3892031-3892348:-1:exon
so has part: feature:3891009-3891311:-1:exon

position:3891009:-1
position: 3891009
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3895224-3895538:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3892031-3892348:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3891009-3891311:-1:exon

BARX2
type: Gene
subclass of: SO_0000704
RO_0002162: 419612
gene: BARX2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(3922066..3986716)
location: region:3922066-3986716:-1
so has part: feature:3922066-3986716:-1:exon
subclass of: SO_0000010

102521736
type: Gene
SIO_000068: ncbigene

position:3922066:-1
position: 3922066
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3986716:-1
position: 3986716
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3922066-3986716:-1:exon

BARX2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 419612
gene: BARX2
product: BARX homeobox 2, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 12 samples with support for all annotated introns
transcript id: XM_032472539.1
SIO_010081: BARX2
subclass of: SO_0000673
so part of: BARX2
location: complement(join(3922066..3923020,3930867..3930951,3934238..3934535,3942692..3942754,3986137..3986716))
location: region:3922066-3986716:-1
so has part: feature:3986137-3986716:-1:exon
so has part: feature:3942692-3942754:-1:exon
so has part: feature:3934238-3934535:-1:exon
so has part: feature:3930867-3930951:-1:exon
so has part: feature:3922066-3923020:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3986137-3986716:-1:exon

position:3986137:-1
position: 3986137
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3942692-3942754:-1:exon

position:3942692:-1
position: 3942692
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3942754:-1
position: 3942754
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3934238-3934535:-1:exon

position:3934238:-1
position: 3934238
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3934535:-1
position: 3934535
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3930867-3930951:-1:exon

position:3930867:-1
position: 3930867
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3930951:-1
position: 3930951
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:3922066-3923020:-1:exon

position:3923020:-1
position: 3923020
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

BARX2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 419612
gene: BARX2
product: BARX homeobox 2, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 32 samples with support for all annotated introns
transcript id: XM_032472540.1
SIO_010081: BARX2
subclass of: SO_0000673
so part of: BARX2
location: complement(join(3922066..3923020,3930867..3930951,3934238..3934535,3986137..3986709))
location: region:3922066-3986709:-1
so has part: feature:3986137-3986709:-1:exon
so has part: feature:3934238-3934535:-1:exon
so has part: feature:3930867-3930951:-1:exon
so has part: feature:3922066-3923020:-1:exon

position:3986709:-1
position: 3986709
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3986137-3986709:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3934238-3934535:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3930867-3930951:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3922066-3923020:-1:exon

BARX2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 419612
gene: BARX2
product: BARX homeobox 2, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 13 samples with support for all annotated introns
transcript id: XM_032472541.1
SIO_010081: BARX2
subclass of: SO_0000673
so part of: BARX2
location: complement(join(3922066..3923020,3930867..3930951,3934238..3934535,3977431..3977607))
location: region:3922066-3977607:-1
so has part: feature:3977431-3977607:-1:exon
so has part: feature:3934238-3934535:-1:exon
so has part: feature:3930867-3930951:-1:exon
so has part: feature:3922066-3923020:-1:exon

position:3977607:-1
position: 3977607
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3977431-3977607:-1:exon

position:3977431:-1
position: 3977431
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3934238-3934535:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3930867-3930951:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3922066-3923020:-1:exon

BARX2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 419612
gene: BARX2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: homeobox protein BarH-like 2 isoform X2
translation: MHCHAELRLSSPGQLKAARRRYKTFMIDEILSKETCDYFEKLSLYSVCPSLVVRPKPLHSCTGPASLRAYPLLSVITRQPTVISHLVPAAPGIAQALSRHPATEATSAEAPGENVGSSESEAEQPTPRQKKPRRSRTIFTELQLMGLEKKFQKQKYLSTPDRLDLAQSLGLTQLQVKTWYQNRRMKWKKMVLKGGQEAPTKPKGRPKKNSIPTSEEIEAEEKLNSQAQSQEPREPSQGQEGICDTQEPKACGVPLEVAEPPSQPQELPVASSEPPPSS
SIO_010081: BARX2
subclass of: SO_0000673
so part of: BARX2
location: complement(join(3922754..3923020,3930867..3930951,3934238..3934535,3986137..3986323))
location: region:3922754-3986323:-1
so has part: feature:3986137-3986323:-1:exon
so has part: feature:3934238-3934535:-1:exon
so has part: feature:3930867-3930951:-1:exon
so has part: feature:3922754-3923020:-1:exon

XP_032328431.1
type: Protein
SIO_000068: ncbiprotein

position:3922754:-1
position: 3922754
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3986323:-1
position: 3986323
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3986137-3986323:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3934238-3934535:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3930867-3930951:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3922754-3923020:-1:exon

BARX2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 419612
gene: BARX2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: homeobox protein BarH-like 2 isoform X1
translation: MHCHAELRLSSPGQLKAARRRYKTFMIDEILSKETCDYFEKLSLYSVCPSLVVRPKPLHSCTEHPATNVQREKRGPTARRCPPGPASLRAYPLLSVITRQPTVISHLVPAAPGIAQALSRHPATEATSAEAPGENVGSSESEAEQPTPRQKKPRRSRTIFTELQLMGLEKKFQKQKYLSTPDRLDLAQSLGLTQLQVKTWYQNRRMKWKKMVLKGGQEAPTKPKGRPKKNSIPTSEEIEAEEKLNSQAQSQEPREPSQGQEGICDTQEPKACGVPLEVAEPPSQPQELPVASSEPPPSS
SIO_010081: BARX2
subclass of: SO_0000673
so part of: BARX2
location: complement(join(3922754..3923020,3930867..3930951,3934238..3934535,3942692..3942754,3986137..3986323))
location: region:3922754-3986323:-1
so has part: feature:3986137-3986323:-1:exon
so has part: feature:3942692-3942754:-1:exon
so has part: feature:3934238-3934535:-1:exon
so has part: feature:3930867-3930951:-1:exon
so has part: feature:3922754-3923020:-1:exon

XP_032328430.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3986137-3986323:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3942692-3942754:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3934238-3934535:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3930867-3930951:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3922754-3923020:-1:exon

BARX2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 419612
gene: BARX2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: homeobox protein BarH-like 2 isoform X3
translation: MCPAHPKTTTAASEIGFGSHSPPRLGGDIIYHHGPASLRAYPLLSVITRQPTVISHLVPAAPGIAQALSRHPATEATSAEAPGENVGSSESEAEQPTPRQKKPRRSRTIFTELQLMGLEKKFQKQKYLSTPDRLDLAQSLGLTQLQVKTWYQNRRMKWKKMVLKGGQEAPTKPKGRPKKNSIPTSEEIEAEEKLNSQAQSQEPREPSQGQEGICDTQEPKACGVPLEVAEPPSQPQELPVASSEPPPSS
SIO_010081: BARX2
subclass of: SO_0000673
so part of: BARX2
location: complement(join(3922754..3923020,3930867..3930951,3934238..3934535,3977431..3977530))
location: region:3922754-3977530:-1
so has part: feature:3977431-3977530:-1:exon
so has part: feature:3934238-3934535:-1:exon
so has part: feature:3930867-3930951:-1:exon
so has part: feature:3922754-3923020:-1:exon

XP_032328432.1
type: Protein
SIO_000068: ncbiprotein

position:3977530:-1
position: 3977530
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3977431-3977530:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3934238-3934535:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3930867-3930951:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3922754-3923020:-1:exon

LOC116661091
type: Gene
subclass of: SO_0000704
RO_0002162: 419612
gene: LOC116661091
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 3986322..3991016
location: region:3986322-3991016:1
so has part: feature:3986322-3991016:1:exon
subclass of: SO_0000010

116661091
type: Gene
SIO_000068: ncbigene

position:3986322:1
position: 3986322
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3991016:1
position: 3991016
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3986322-3991016:1:exon

LOC116661091
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 419612
gene: LOC116661091
product: uncharacterized LOC116661091
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 90% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_032472314.1
SIO_010081: LOC116661091
subclass of: SO_0000673
so part of: LOC116661091
location: join(3986322..3986387,3986497..3986742,3986936..3987173,3987270..3987424,3987504..3987603,3987748..3988350,3988824..3991016)
location: region:3986322-3991016:1
so has part: feature:3986322-3986387:1:exon
so has part: feature:3986497-3986742:1:exon
so has part: feature:3986936-3987173:1:exon
so has part: feature:3987270-3987424:1:exon
so has part: feature:3987504-3987603:1:exon
so has part: feature:3987748-3988350:1:exon
so has part: feature:3988824-3991016:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3986322-3986387:1:exon

position:3986387:1
position: 3986387
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3986497-3986742:1:exon

position:3986497:1
position: 3986497
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3986742:1
position: 3986742
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3986936-3987173:1:exon

position:3986936:1
position: 3986936
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3987173:1
position: 3987173
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3987270-3987424:1:exon

position:3987270:1
position: 3987270
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3987424:1
position: 3987424
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:3987504-3987603:1:exon

position:3987504:1
position: 3987504
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3987603:1
position: 3987603
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:3987748-3988350:1:exon

position:3987748:1
position: 3987748
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3988350:1
position: 3988350
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:3988824-3991016:1:exon

position:3988824:1
position: 3988824
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC116661091
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 419612
gene: LOC116661091
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC116661091
translation: MVSRGERPPARASARLLRGREALSISARFLHGRRRSRAESRPPRGVGAHPAQPACATPARTCAPRARRSRSPPPASQWLALLCLPILRLSLWLSSPPPSWDELQKEVKSSQNLPRLRPPGPAPSEDPAAFLPPRVDPCGPFPEDGGLARSPRAPALGVCAEVENFTAPGRSQTVDPCPVLYSKRPARRDCWVRPALGQSPLSRFLAPDTGAPRLSCPRLLTTHRGPGAAKTRFFKSEFLVEETPTQPRRRHRPAVRVLPRAPGRRKLPGRRRLAAELLALEPESPRTQVDARAWARVSTQKGPTWRTNNWALRENSNKPNQSQALDVVCDAPLRNFVPEVFACALAPRLSSPFRIVFVYHVERF
SIO_010081: LOC116661091
subclass of: SO_0000673
so part of: LOC116661091
location: join(3986322..3986387,3986497..3986742,3986936..3987173,3987270..3987424,3987504..3987603,3987748..3988037)
location: region:3986322-3988037:1
so has part: feature:3986322-3986387:1:exon
so has part: feature:3986497-3986742:1:exon
so has part: feature:3986936-3987173:1:exon
so has part: feature:3987270-3987424:1:exon
so has part: feature:3987504-3987603:1:exon
so has part: feature:3987748-3988037:1:exon

XP_032328205.1
type: Protein
SIO_000068: ncbiprotein

position:3988037:1
position: 3988037
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3986322-3986387:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3986497-3986742:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3986936-3987173:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3987270-3987424:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3987504-3987603:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3987748-3988037:1:exon

LOC106729242
type: Gene
subclass of: SO_0000704
RO_0002162: 419612
gene: LOC106729242
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(4047311..4050437)
location: region:4047311-4050437:-1
so has part: feature:4047311-4050437:-1:exon
subclass of: SO_0000010

106729242
type: Gene
SIO_000068: ncbigene

position:4047311:-1
position: 4047311
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4050437:-1
position: 4050437
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4047311-4050437:-1:exon

LOC106729242
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 419612
gene: LOC106729242
product: basic proline-rich protein-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 75% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_032472315.1
SIO_010081: LOC106729242
subclass of: SO_0000673
so part of: LOC106729242
location: complement(join(4047311..4047618,4047765..4047853,4049029..4050437))
location: region:4047311-4050437:-1
so has part: feature:4049029-4050437:-1:exon
so has part: feature:4047765-4047853:-1:exon
so has part: feature:4047311-4047618:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4049029-4050437:-1:exon

position:4049029:-1
position: 4049029
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4047765-4047853:-1:exon

position:4047765:-1
position: 4047765
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4047853:-1
position: 4047853
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4047311-4047618:-1:exon

position:4047618:-1
position: 4047618
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC106729242
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 419612
gene: LOC106729242
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: basic proline-rich protein-like
translation: MQQQLQPIRKTRGKTPRERRRARRGAGTARAPVGGAGERPRPRDPQAARPAPRAGSTAAGRQPPGPVRRGRGEAARPERGPPREAGEGARGGRGNPRWPSKNIRSRTCTLKRIPPERLARPPQPSPKRLPTSPAPPALPRPPPYRAPRPRRAAAASLRPARRSVSALRGAGPDALLLRLLLVVALVLAAEHRPRAEPSAWSPRAAAGARPGAPRASASSRRAAPSGSGAGTPGSGPRPRSPHLRHAPRSPSPGGDGPGDAVLGLRAPHPPSSGRPRSAPSPLAARARRSPPPAGPPPPALRLLLRPRRPQRGEEARRRGSGHEHARGGRAERARGRGRRGRAQASPVVVPGAHVRGGGWCGEGRAARPPRGARAAGRGKGAETRPRGCGRALLPRLLHRAAVQKYKTCRSSGTAGKTSSGTTAVAPLHSQLTPGCCHRAATERRGGVAQVRKLLGSPSLAHFGQKINSHSLHIPEFCHHTPKFSCTDRILNGLCSAGEEDVGGV
SIO_010081: LOC106729242
subclass of: SO_0000673
so part of: LOC106729242
location: complement(join(4047602..4047618,4047765..4047853,4049029..4050437))
location: region:4047602-4050437:-1
so has part: feature:4049029-4050437:-1:exon
so has part: feature:4047765-4047853:-1:exon
so has part: feature:4047602-4047618:-1:exon

XP_032328206.1
type: Protein
SIO_000068: ncbiprotein

position:4047602:-1
position: 4047602
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4049029-4050437:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4047765-4047853:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4047602-4047618:-1:exon

LOC116661172
type: Gene
subclass of: SO_0000704
RO_0002162: 419612
gene: LOC116661172
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(4061588..4079794)
location: region:4061588-4079794:-1
so has part: feature:4061588-4079794:-1:exon
subclass of: SO_0000011

116661172
type: Gene
SIO_000068: ncbigene

position:4061588:-1
position: 4061588
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4079794:-1
position: 4079794
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4061588-4079794:-1:exon

LOC116661172
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 419612
nc RNA class: lncRNA
gene: LOC116661172
product: uncharacterized LOC116661172
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XR_004316955.1
SIO_010081: LOC116661172
subclass of: SO_0000673
so part of: LOC116661172
location: complement(join(4061588..4061597,4076834..4076839,4079711..4079794))
location: region:4061588-4079794:-1
so has part: feature:4079711-4079794:-1:exon
so has part: feature:4076834-4076839:-1:exon
so has part: feature:4061588-4061597:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4079711-4079794:-1:exon

position:4079711:-1
position: 4079711
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4076834-4076839:-1:exon

position:4076834:-1
position: 4076834
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4076839:-1
position: 4076839
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4061588-4061597:-1:exon

position:4061597:-1
position: 4061597
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

ARHGAP32
type: Gene
subclass of: SO_0000704
RO_0002162: 419612
gene: ARHGAP32
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 4106748..4225683
location: region:4106748-4225683:1
so has part: feature:4106748-4225683:1:exon
subclass of: SO_0000010

102503751
type: Gene
SIO_000068: ncbigene

position:4106748:1
position: 4106748
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4225683:1
position: 4225683
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4106748-4225683:1:exon

ARHGAP32
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 419612
gene: ARHGAP32
product: Rho GTPase activating protein 32
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_032472537.1
SIO_010081: ARHGAP32
subclass of: SO_0000673
so part of: ARHGAP32
location: join(4106748..4106989,4117878..4117986,4131492..4131583,4132124..4132165,4132536..4132620,4151367..4151453,4157603..4157740,4159760..4159852,4160691..4160813,4162352..4162429,4174449..4174530,4198667..4198816,4204573..4204675,4206135..4206279,4206714..4206796,4207562..4207669,4207945..4208090,4208753..4208948,4210481..4210626,4212955..4213026,4214841..4215725,4216406..4217370,4218775..4225683)
location: region:4106748-4225683:1
so has part: feature:4106748-4106989:1:exon
so has part: feature:4117878-4117986:1:exon
so has part: feature:4131492-4131583:1:exon
so has part: feature:4132124-4132165:1:exon
so has part: feature:4132536-4132620:1:exon
so has part: feature:4151367-4151453:1:exon
so has part: feature:4157603-4157740:1:exon
so has part: feature:4159760-4159852:1:exon
so has part: feature:4160691-4160813:1:exon
so has part: feature:4162352-4162429:1:exon
so has part: feature:4174449-4174530:1:exon
so has part: feature:4198667-4198816:1:exon
so has part: feature:4204573-4204675:1:exon
so has part: feature:4206135-4206279:1:exon
so has part: feature:4206714-4206796:1:exon
so has part: feature:4207562-4207669:1:exon
so has part: feature:4207945-4208090:1:exon
so has part: feature:4208753-4208948:1:exon
so has part: feature:4210481-4210626:1:exon
so has part: feature:4212955-4213026:1:exon
so has part: feature:4214841-4215725:1:exon
so has part: feature:4216406-4217370:1:exon
so has part: feature:4218775-4225683:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4106748-4106989:1:exon

position:4106989:1
position: 4106989
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4117878-4117986:1:exon

position:4117878:1
position: 4117878
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4117986:1
position: 4117986
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4131492-4131583:1:exon

position:4131492:1
position: 4131492
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4131583:1
position: 4131583
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:4132124-4132165:1:exon

position:4132124:1
position: 4132124
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4132165:1
position: 4132165
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:4132536-4132620:1:exon

position:4132536:1
position: 4132536
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4132620:1
position: 4132620
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:4151367-4151453:1:exon

position:4151367:1
position: 4151367
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4151453:1
position: 4151453
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:4157603-4157740:1:exon

position:4157603:1
position: 4157603
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4157740:1
position: 4157740
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:4159760-4159852:1:exon

position:4159760:1
position: 4159760
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4159852:1
position: 4159852
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:4160691-4160813:1:exon

position:4160691:1
position: 4160691
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4160813:1
position: 4160813
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:4162352-4162429:1:exon

position:4162352:1
position: 4162352
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4162429:1
position: 4162429
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:4174449-4174530:1:exon

position:4174449:1
position: 4174449
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4174530:1
position: 4174530
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:4198667-4198816:1:exon

position:4198667:1
position: 4198667
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4198816:1
position: 4198816
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:4204573-4204675:1:exon

position:4204573:1
position: 4204573
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4204675:1
position: 4204675
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:4206135-4206279:1:exon

position:4206135:1
position: 4206135
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4206279:1
position: 4206279
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:4206714-4206796:1:exon

position:4206714:1
position: 4206714
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4206796:1
position: 4206796
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:4207562-4207669:1:exon

position:4207562:1
position: 4207562
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4207669:1
position: 4207669
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:4207945-4208090:1:exon

position:4207945:1
position: 4207945
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4208090:1
position: 4208090
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:4208753-4208948:1:exon

position:4208753:1
position: 4208753
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4208948:1
position: 4208948
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:4210481-4210626:1:exon

position:4210481:1
position: 4210481
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4210626:1
position: 4210626
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:4212955-4213026:1:exon

position:4212955:1
position: 4212955
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4213026:1
position: 4213026
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:4214841-4215725:1:exon

position:4214841:1
position: 4214841
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4215725:1
position: 4215725
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:4216406-4217370:1:exon

position:4216406:1
position: 4216406
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4217370:1
position: 4217370
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:4218775-4225683:1:exon

position:4218775:1
position: 4218775
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

ARHGAP32
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 419612
gene: ARHGAP32
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: rho GTPase-activating protein 32
translation: METESESSTSGDDSVFWLDSEVITPVTDGEGEGREEHSRKMKSSVHSEEDDFVPELHRNVHPRERPDWEETLSAMARGADVPEIPGDLSLKTCGSTASMKVKHVKKPTNPGLMGCDNIHRLPFTKGHFPKMAECAHFHYENVEFGSIQLSLPEEQNEVTKNGCESKELVYLVHIACQGKSWIVKRSYEDFRVLDKHLHLCIYDRRFSQLSELPRSDTLKDSPESVTQMLMAYLSRLSAIAGNKINCGPALTWMEMDNKGNHLLVHEESSINTPAVGAAHVIKRYTARAPDELTLEVGDIVSVIDMPPKVLSTWWRGKHGFQVGLFPGHCVELINQKVPQSVTNSVPKPVSKKHGKLITFLRTFMKSRPTKQKLKQRGILKERVFGCDLGEHLLNSGFEVPQVLQSCTAFIERYGIVDGIYRLSGVASNIQRLRHEFDSEHVPDLTKEPYVQDIHSVGSLCKLYFRELPNPLLTYQLYEKFSDAVSAATDEERLIKIHDVIQQLPPPHYRTLEFLMRHLSLLADYCSITNMHAKNLAIVWAPNLLRSKQIESACFSGTAAFMEVRIQSVVVEFILNHVDVLFSGRISAAMQEGAASLSRPKSLLVPSPSTKLLTLEEAQARTQAQVTSPAVSENKYIEVGEGPAALQGKFHTVIEFPLERRRPQNKMKKSPVGSWRSFFNLGKSSSVSKRKLQRNESEPSEMKAAALKGGRAEGTLRSAKSEESLTSLHAVDGDSKLFRPRRPRSSSDALSASFNGEMLGNRCNSYDNLPHDNESEEEVGLLHVPALLSPHSAEDVDLSPPDIGVASLDFDPMSFQCSPPKAESECLEGGASFFDSLGYSKDRQNTNNKDSEAGGSQSQTPGSAASSEPVSPVQEKLSPFFTLDLSPTEEKPSKASSFTEKVVYAFSPKIGRKLSRSPSMNISEPISVTLPARVSEVIGTASNTAAQDAPSPTWNKSVEESDVINRPPTQVVKLKASEREAQEGCESAAQPLGQVAPAGVESPGKEEEPASASSGQSKAVPPGQTQTGADNHDPPQDPVPVSSVSLIPPPPPPKNVARLLALALAESAQQASTQPPRRPGPSQAACASYGGLAVAAAEDRLPASHSSVTADRAFFQADMPTEQPHLQDGDQPAPGAAAVGDYTHSCATESGGQPHPADFPGSQPHRIYLAGDPEKAGVTSVPLTDSKSDDHLSFPEDQSAKTSVLTVSFVDQDRSQPRLYSGEQPSSYLGASVDKPHHPLELADKSPTPCNLPRDKVYPPPGSPEEDTSTAPVAYVTTVPTAAEMSTREAGWDVVEQPSAVDFAVATLQRTHRTSRPLPLPPSQRATEQLPGPGQGQAAASVGVHNAHKVPGVVPALERPPEPRAAGDPAPVLASDGTAAQCPAATPALQPGLPEKVREGARAPPLPLRAEPAPVHPACGFPGPAPQARTADGKIAAAAHCIGADAACGPGPHAFAGAAPASVDDDVLPLPLPVPQPKHASQRTAYSAFARPDVSTEPFSLENCLHFNVTPNCQYRPQSVPPHHSKVEPHPAFASRSEPPASVGPRYNTYVAPGRNASGHHWKPCGRAEYVSSLGAAVRGGCYPEDAPPHPTIRRVQSLHAPPSSVIRSVPISRTEVPPDEEPAFCPRPLHQYKPCPPPQARPDYHVTQLQPYFENGRVHYRYSPYSGAAGALCDLDACGALPLRPLHRLPGRDLAFCNPRLQGKSVLGYAGLPPRPRAGAPGYFSANDHSVVSMPPVADVKHSYTSWDLEDMEKYRVQSIRRESRARQKVKGPVVSQYDNMAPAAQDDLGGIYVIHLRSKSDPGKTGLLSVAEGKEGRHAVKAVSPEGEDRFYRKHAEPELDRAHPHGAYGGGQPEKPCLPQKQSSLRNRKLHDMGCGLPEHRGHQEASHRQLCESKHGPPYPQGAGQLDYGPQGIPDASEPVSYHNSGGIYVPSGQESLRLNHKEVRLSKELERPRARQPPAPEKHSRDGYKEEEHLAPSVVPPPKPERSHSLKLHHAQ…
SIO_010081: ARHGAP32
subclass of: SO_0000673
so part of: ARHGAP32
location: join(4106873..4106989,4117878..4117986,4131492..4131583,4132124..4132165,4132536..4132620,4151367..4151453,4157603..4157740,4159760..4159852,4160691..4160813,4162352..4162429,4174449..4174530,4198667..4198816,4204573..4204675,4206135..4206279,4206714..4206796,4207562..4207669,4207945..4208090,4208753..4208948,4210481..4210626,4212955..4213026,4214841..4215725,4216406..4217370,4218775..4221009)
location: region:4106873-4221009:1
so has part: feature:4106873-4106989:1:exon
so has part: feature:4117878-4117986:1:exon
so has part: feature:4131492-4131583:1:exon
so has part: feature:4132124-4132165:1:exon
so has part: feature:4132536-4132620:1:exon
so has part: feature:4151367-4151453:1:exon
so has part: feature:4157603-4157740:1:exon
so has part: feature:4159760-4159852:1:exon
so has part: feature:4160691-4160813:1:exon
so has part: feature:4162352-4162429:1:exon
so has part: feature:4174449-4174530:1:exon
so has part: feature:4198667-4198816:1:exon
so has part: feature:4204573-4204675:1:exon
so has part: feature:4206135-4206279:1:exon
so has part: feature:4206714-4206796:1:exon
so has part: feature:4207562-4207669:1:exon
so has part: feature:4207945-4208090:1:exon
so has part: feature:4208753-4208948:1:exon
so has part: feature:4210481-4210626:1:exon
so has part: feature:4212955-4213026:1:exon
so has part: feature:4214841-4215725:1:exon
so has part: feature:4216406-4217370:1:exon
so has part: feature:4218775-4221009:1:exon

XP_032328428.1
type: Protein
SIO_000068: ncbiprotein

position:4106873:1
position: 4106873
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4221009:1
position: 4221009
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4106873-4106989:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4117878-4117986:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4131492-4131583:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4132124-4132165:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4132536-4132620:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4151367-4151453:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4157603-4157740:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4159760-4159852:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4160691-4160813:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4162352-4162429:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:4174449-4174530:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:4198667-4198816:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:4204573-4204675:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:4206135-4206279:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:4206714-4206796:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:4207562-4207669:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:4207945-4208090:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:4208753-4208948:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:4210481-4210626:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:4212955-4213026:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:4214841-4215725:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:4216406-4217370:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:4218775-4221009:1:exon

KCNJ5
type: Gene
subclass of: SO_0000704
RO_0002162: 419612
gene: KCNJ5
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(4246726..4266580)
location: region:4246726-4266580:-1
so has part: feature:4246726-4266580:-1:exon
subclass of: SO_0000010

102521489
type: Gene
SIO_000068: ncbigene

position:4246726:-1
position: 4246726
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4266580:-1
position: 4266580
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4246726-4266580:-1:exon

KCNJ5
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 419612
gene: KCNJ5
product: potassium inwardly rectifying channel subfamily J member 5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 24 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_006181715.3
SIO_010081: KCNJ5
subclass of: SO_0000673
so part of: KCNJ5
location: complement(join(4246726..4249913,4252808..4253746,4266333..4266580))
location: region:4246726-4266580:-1
so has part: feature:4266333-4266580:-1:exon
so has part: feature:4252808-4253746:-1:exon
so has part: feature:4246726-4249913:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4266333-4266580:-1:exon

position:4266333:-1
position: 4266333
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4252808-4253746:-1:exon

position:4252808:-1
position: 4252808
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4253746:-1
position: 4253746
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4246726-4249913:-1:exon

position:4249913:-1
position: 4249913
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

KCNJ5
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 419612
gene: KCNJ5
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: G protein-activated inward rectifier potassium channel 4
translation: MAGDSRNAMNQDMEIGVTTRDPKKIPKQARDYIPIATDRTRLLVEGRRPRQRYMEKSGKCNVHHGNVQETYRYLSDLFTTLVDLKWRFNLLVFTMVYTVTWLFFGFIWWLIAYIRGDLDHVGDQEWIPCVENLSGFVSAFLFSIETETTIGYGFRVITEKCPEGIILLLVQAILGSIVNAFMVGCMFVKISQPKKRAETLMFSNHAVISLRDEKLCLMFRVGDLRNSHIVEASIRAKLIKSRQTKEGEFIPLNQTDINVGFDTGDDRLFLVSPLIISHEINEKSPFWEMSRAQLNQEEFEVVVILEGMVEATGMTCQARSSYMDTEVLWGHRFTPVLTLEKGFYEVDYNTFHDTYETNTPSCCAKELAEMRREGRLLQYLPSAPLPGGGAGAELEPEAEQDGEDEPEGLSGSREPRGSV
SIO_010081: KCNJ5
subclass of: SO_0000673
so part of: KCNJ5
location: complement(join(4249591..4249913,4252808..4253744))
location: region:4249591-4253744:-1
so has part: feature:4252808-4253744:-1:exon
so has part: feature:4249591-4249913:-1:exon

XP_006181777.1
type: Protein
SIO_000068: ncbiprotein

position:4249591:-1
position: 4249591
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4253744:-1
position: 4253744
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4252808-4253744:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4249591-4249913:-1:exon