Camelus ferus isolate YT-003-E chromosome 31, BCGSAC_Cfer_1.0, whole genome shotgun sequence.
type: Entry
definition: Camelus ferus isolate YT-003-E chromosome 31, BCGSAC_Cfer_1.0, whole genome shotgun sequence.
sequence version: NC_045726.1
sequence date: 2020-02-19
sequence: sequence
division: CON
label: NC_045726.1
type: RefSeq
SIO_000068: refseq
dblink: PRJNA605179
dblink: SAMN12102236
keyword: WGS
keyword: RefSeq
source: Camelus ferus (Wild Bactrian camel)
organism: Camelus ferus
taxonomy: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Tylopoda; Camelidae; Camelus.
comment: REFSEQ INFORMATION: The reference sequence is identical to\nCM020798.1.\nAssembly name: BCGSAC_Cfer_1.0\nThe genomic sequence for this RefSeq record is from the\nwhole-genome assembly released by The Bactrian Camels Genome\nSequencing and Analysis Consortium on 2020/01/08. The original\nwhole-genome shotgun project has the accession VSZR00000000.1.\n\n##Genome-Assembly-Data-START##\nAssembly Provider :: The Bactrian Camels Genome Sequencing and\n Analysis Consortium\nAssembly Method :: FALCON v. FEB-2018; LACHESIS v. MAR-2018\nAssembly Name :: BCGSAC_Cfer_1.0\nGenome Representation :: Full\nExpected Final Version :: Yes\nGenome Coverage :: 50.0x\nSequencing Technology :: PacBio Sequel; Hi-C\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI\nAnnotation Status :: Full annotation\nAnnotation Name :: Camelus ferus Annotation Release 102\nAnnotation Version :: 102\nAnnotation Pipeline :: NCBI eukaryotic genome annotation\n pipeline\nAnnotation Software Version :: 8.3\nAnnotation Method :: Best-placed RefSeq; Gnomon\nFeatures Annotated :: Gene; mRNA; CDS; ncRNA\n##Genome-Annotation-Data-END##

sequence
subclass of: SO_0000340
sequence length: 20268452
topology: linear
so has quality: SO_0000987
location: 1..20268452
location: region:1-20268452:1
RO_0002162: 419612

NC_045726
type: RefSeq
SIO_000068: refseq

PRJNA605179
type: BioProject
SIO_000068: bioproject

SAMN12102236
type: BioSample
SIO_000068: biosample

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:20268452:1
position: 20268452
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-20268452:1:source
so part of: sequence
organism: Camelus ferus
mol type: genomic DNA
isolate: YT-003-E
chromosome: 31
sex: male
tissue type: ear skin
country: Mongolia

419612
type: Taxonomy
SIO_000068: taxonomy

LOC116660722
type: Gene
subclass of: SO_0000704
RO_0002162: 419612
gene: LOC116660722
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 254507..255959
location: region:254507-255959:1
so has part: feature:254507-255959:1:exon
subclass of: SO_0000011

116660722
type: Gene
SIO_000068: ncbigene

position:254507:1
position: 254507
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:255959:1
position: 255959
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:254507-255959:1:exon

LOC116660722
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 419612
nc RNA class: lncRNA
gene: LOC116660722
product: uncharacterized LOC116660722
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XR_004316320.1
SIO_010081: LOC116660722
subclass of: SO_0000673
so part of: LOC116660722
location: join(254507..254557,255687..255959)
location: region:254507-255959:1
so has part: feature:254507-254557:1:exon
so has part: feature:255687-255959:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:254507-254557:1:exon

position:254557:1
position: 254557
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:255687-255959:1:exon

position:255687:1
position: 255687
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC116660816
type: Gene
subclass of: SO_0000704
RO_0002162: 419612
gene: LOC116660816
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2643528..2664708)
location: region:2643528-2664708:-1
so has part: feature:2643528-2664708:-1:exon
subclass of: SO_0000011

116660816
type: Gene
SIO_000068: ncbigene

position:2643528:-1
position: 2643528
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2664708:-1
position: 2664708
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2643528-2664708:-1:exon

LOC116660816
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 419612
nc RNA class: lncRNA
gene: LOC116660816
product: uncharacterized LOC116660816, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XR_004316464.1
SIO_010081: LOC116660816
subclass of: SO_0000673
so part of: LOC116660816
location: complement(join(2643528..2645417,2647498..2647618,2652217..2652256,2664625..2664708))
location: region:2643528-2664708:-1
so has part: feature:2664625-2664708:-1:exon
so has part: feature:2652217-2652256:-1:exon
so has part: feature:2647498-2647618:-1:exon
so has part: feature:2643528-2645417:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2664625-2664708:-1:exon

position:2664625:-1
position: 2664625
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2652217-2652256:-1:exon

position:2652217:-1
position: 2652217
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2652256:-1
position: 2652256
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2647498-2647618:-1:exon

position:2647498:-1
position: 2647498
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2647618:-1
position: 2647618
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2643528-2645417:-1:exon

position:2645417:-1
position: 2645417
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC116660816
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 419612
nc RNA class: lncRNA
gene: LOC116660816
product: uncharacterized LOC116660816, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
transcript id: XR_004316463.1
SIO_010081: LOC116660816
subclass of: SO_0000673
so part of: LOC116660816
location: complement(join(2646855..2647618,2652217..2652256,2664625..2664708))
location: region:2646855-2664708:-1
so has part: feature:2664625-2664708:-1:exon
so has part: feature:2652217-2652256:-1:exon
so has part: feature:2646855-2647618:-1:exon

position:2646855:-1
position: 2646855
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2664625-2664708:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2652217-2652256:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2646855-2647618:-1:exon

LOC116660819
type: Gene
subclass of: SO_0000704
RO_0002162: 419612
gene: LOC116660819
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2675877..2698950)
location: region:2675877-2698950:-1
so has part: feature:2675877-2698950:-1:exon
subclass of: SO_0000011

116660819
type: Gene
SIO_000068: ncbigene

position:2675877:-1
position: 2675877
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2698950:-1
position: 2698950
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2675877-2698950:-1:exon

LOC116660819
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 419612
nc RNA class: lncRNA
gene: LOC116660819
product: uncharacterized LOC116660819
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XR_004316467.1
SIO_010081: LOC116660819
subclass of: SO_0000673
so part of: LOC116660819
location: complement(join(2675877..2676532,2690799..2690803,2698940..2698950))
location: region:2675877-2698950:-1
so has part: feature:2698940-2698950:-1:exon
so has part: feature:2690799-2690803:-1:exon
so has part: feature:2675877-2676532:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2698940-2698950:-1:exon

position:2698940:-1
position: 2698940
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2690799-2690803:-1:exon

position:2690799:-1
position: 2690799
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2690803:-1
position: 2690803
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2675877-2676532:-1:exon

position:2676532:-1
position: 2676532
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC116660817
type: Gene
subclass of: SO_0000704
RO_0002162: 419612
gene: LOC116660817
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2703511..2707829
location: region:2703511-2707829:1
so has part: feature:2703511-2707829:1:exon
subclass of: SO_0000011

116660817
type: Gene
SIO_000068: ncbigene

position:2703511:1
position: 2703511
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2707829:1
position: 2707829
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2703511-2707829:1:exon

LOC116660817
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 419612
nc RNA class: lncRNA
gene: LOC116660817
product: uncharacterized LOC116660817
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XR_004316465.1
SIO_010081: LOC116660817
subclass of: SO_0000673
so part of: LOC116660817
location: join(2703511..2703522,2704420..2704423,2707698..2707829)
location: region:2703511-2707829:1
so has part: feature:2703511-2703522:1:exon
so has part: feature:2704420-2704423:1:exon
so has part: feature:2707698-2707829:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2703511-2703522:1:exon

position:2703522:1
position: 2703522
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2704420-2704423:1:exon

position:2704420:1
position: 2704420
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2704423:1
position: 2704423
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2707698-2707829:1:exon

position:2707698:1
position: 2707698
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC106728651
type: Gene
subclass of: SO_0000704
RO_0002162: 419612
gene: LOC106728651
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2708296..2773624)
location: region:2708296-2773624:-1
so has part: feature:2708296-2773624:-1:exon
subclass of: SO_0000010

106728651
type: Gene
SIO_000068: ncbigene

position:2708296:-1
position: 2708296
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2773624:-1
position: 2773624
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2708296-2773624:-1:exon

LOC106728651
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 419612
gene: LOC106728651
product: dual specificity tyrosine-phosphorylation-regulated kinase 1A-like, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_032471106.1
SIO_010081: LOC106728651
subclass of: SO_0000673
so part of: LOC106728651
location: complement(join(2708296..2708405,2711602..2711790,2713767..2713859,2719807..2720003,2754546..2754651,2772064..2772292,2772881..2773624))
location: region:2708296-2773624:-1
so has part: feature:2772881-2773624:-1:exon
so has part: feature:2772064-2772292:-1:exon
so has part: feature:2754546-2754651:-1:exon
so has part: feature:2719807-2720003:-1:exon
so has part: feature:2713767-2713859:-1:exon
so has part: feature:2711602-2711790:-1:exon
so has part: feature:2708296-2708405:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2772881-2773624:-1:exon

position:2772881:-1
position: 2772881
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2772064-2772292:-1:exon

position:2772064:-1
position: 2772064
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2772292:-1
position: 2772292
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2754546-2754651:-1:exon

position:2754546:-1
position: 2754546
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2754651:-1
position: 2754651
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2719807-2720003:-1:exon

position:2719807:-1
position: 2719807
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2720003:-1
position: 2720003
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2713767-2713859:-1:exon

position:2713767:-1
position: 2713767
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2713859:-1
position: 2713859
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2711602-2711790:-1:exon

position:2711602:-1
position: 2711602
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2711790:-1
position: 2711790
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:2708296-2708405:-1:exon

position:2708405:-1
position: 2708405
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC106728651
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 419612
gene: LOC106728651
product: dual specificity tyrosine-phosphorylation-regulated kinase 1A-like, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_032471107.1
SIO_010081: LOC106728651
subclass of: SO_0000673
so part of: LOC106728651
location: complement(join(2708296..2708405,2711602..2711790,2713767..2713886,2719807..2720003,2730430..2730625))
location: region:2708296-2730625:-1
so has part: feature:2730430-2730625:-1:exon
so has part: feature:2719807-2720003:-1:exon
so has part: feature:2713767-2713886:-1:exon
so has part: feature:2711602-2711790:-1:exon
so has part: feature:2708296-2708405:-1:exon

position:2730625:-1
position: 2730625
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2730430-2730625:-1:exon

position:2730430:-1
position: 2730430
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2719807-2720003:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2713767-2713886:-1:exon

position:2713886:-1
position: 2713886
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2711602-2711790:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2708296-2708405:-1:exon

LOC106728651
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 419612
gene: LOC106728651
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: dual specificity tyrosine-phosphorylation-regulated kinase 1A-like isoform X1
translation: MGKTLLSTYLSLTELGSYQTWSWYPVSILASRGETSACKPPSVWLALSLSFHAAGLQMAAQMPHSHQYRDRHHPDISDQQVSALSYSDRIQQPLTNQRQMPQTFRDPATAPLRKISIDLIKTYKHINEVYYAKKKRRHQQGQGDDSSHKKEQKVYNDGYDDDNHDYIVKHGDKWMDCYEIDSLIGKGSFGQVVKAYDRVEQEWAAIKIIKNKKAFPESSPDRSATS
SIO_010081: LOC106728651
subclass of: SO_0000673
so part of: LOC106728651
location: complement(join(2708298..2708405,2711602..2711790,2713767..2713859,2719807..2720003,2754546..2754639))
location: region:2708298-2754639:-1
so has part: feature:2754546-2754639:-1:exon
so has part: feature:2719807-2720003:-1:exon
so has part: feature:2713767-2713859:-1:exon
so has part: feature:2711602-2711790:-1:exon
so has part: feature:2708298-2708405:-1:exon

XP_032326997.1
type: Protein
SIO_000068: ncbiprotein

position:2708298:-1
position: 2708298
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2754639:-1
position: 2754639
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2754546-2754639:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2719807-2720003:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2713767-2713859:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2711602-2711790:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2708298-2708405:-1:exon

LOC106728651
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 419612
gene: LOC106728651
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: dual specificity tyrosine-phosphorylation-regulated kinase 1A-like isoform X2
translation: MAACGGETSACKPPSVWLALSLSFHAAGLQMAAQMPHSHQYRDRHHPDISDQQVSALSYSDRIQQPLTNQVMPDVVMLQRQMPQTFRDPATAPLRKISIDLIKTYKHINEVYYAKKKRRHQQGQGDDSSHKKEQKVYNDGYDDDNHDYIVKHGDKWMDCYEIDSLIGKGSFGQVVKAYDRVEQEWAAIKIIKNKKAFPESSPDRSATS
SIO_010081: LOC106728651
subclass of: SO_0000673
so part of: LOC106728651
location: complement(join(2708298..2708405,2711602..2711790,2713767..2713886,2719807..2720003,2730430..2730442))
location: region:2708298-2730442:-1
so has part: feature:2730430-2730442:-1:exon
so has part: feature:2719807-2720003:-1:exon
so has part: feature:2713767-2713886:-1:exon
so has part: feature:2711602-2711790:-1:exon
so has part: feature:2708298-2708405:-1:exon

XP_032326998.1
type: Protein
SIO_000068: ncbiprotein

position:2730442:-1
position: 2730442
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2730430-2730442:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2719807-2720003:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2713767-2713886:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2711602-2711790:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2708298-2708405:-1:exon

LOC116660725
type: Gene
subclass of: SO_0000704
RO_0002162: 419612
gene: LOC116660725
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2787050..2788415
location: region:2787050-2788415:1
so has part: feature:2787050-2788415:1:exon
subclass of: SO_0000010

116660725
type: Gene
SIO_000068: ncbigene

position:2787050:1
position: 2787050
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2788415:1
position: 2788415
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2787050-2788415:1:exon

LOC116660725
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 419612
gene: LOC116660725
product: predicted GPI-anchored protein 58
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 93% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_032470825.1
SIO_010081: LOC116660725
subclass of: SO_0000673
so part of: LOC116660725
location: join(2787050..2787761,2788069..2788415)
location: region:2787050-2788415:1
so has part: feature:2787050-2787761:1:exon
so has part: feature:2788069-2788415:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2787050-2787761:1:exon

position:2787761:1
position: 2787761
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2788069-2788415:1:exon

position:2788069:1
position: 2788069
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC116660725
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 419612
gene: LOC116660725
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: predicted GPI-anchored protein 58
translation: MSLDMEGSSPPRPPAQTLPRSLPRILPGAKGQLSTPGSDLEHRAHLPGSQVEDQEPPEAQPKVTGPEQAGAGEDARDQKQDHQDPAGDLKLPPAAPAEPEDPAAPADLAAPEDPASPAPAPAPGPLGSGEPVQASSPPGAEPPLHPPTPPKSQHESPPPPALDFPTPEVVFVLFFFS
SIO_010081: LOC116660725
subclass of: SO_0000673
so part of: LOC116660725
location: join(2787575..2787761,2788069..2788415)
location: region:2787575-2788415:1
so has part: feature:2787575-2787761:1:exon
so has part: feature:2788069-2788415:1:exon

XP_032326716.1
type: Protein
SIO_000068: ncbiprotein

position:2787575:1
position: 2787575
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2787575-2787761:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2788069-2788415:1:exon

LOC116660809
type: Gene
subclass of: SO_0000704
RO_0002162: 419612
gene: LOC116660809
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: 2819295..2820512
location: region:2819295-2820512:1
so has part: feature:2819295-2820512:1:exon

116660809
type: Gene
SIO_000068: ncbigene

position:2819295:1
position: 2819295
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2820512:1
position: 2820512
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2819295-2820512:1:exon

LOC116660809
type: Exon
subclass of: SO_0000147
RO_0002162: 419612
gene: LOC116660809
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 87% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC116660809
subclass of: SO_0000673
so part of: LOC116660809
location: 2819295..2820512
location: region:2819295-2820512:1
so has part: feature:2819295-2820512:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2819295-2820512:1:exon

LOC116660726
type: Gene
subclass of: SO_0000704
RO_0002162: 419612
gene: LOC116660726
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2871410..2909599
location: region:2871410-2909599:1
so has part: feature:2871410-2909599:1:exon
subclass of: SO_0000010

116660726
type: Gene
SIO_000068: ncbigene

position:2871410:1
position: 2871410
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2909599:1
position: 2909599
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2871410-2909599:1:exon

LOC116660726
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 419612
gene: LOC116660726
product: uncharacterized LOC116660726
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 59% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_032470826.1
SIO_010081: LOC116660726
subclass of: SO_0000673
so part of: LOC116660726
location: join(2871410..2871713,2876315..2876516,2906224..2906365,2906580..2906670,2909313..2909599)
location: region:2871410-2909599:1
so has part: feature:2871410-2871713:1:exon
so has part: feature:2876315-2876516:1:exon
so has part: feature:2906224-2906365:1:exon
so has part: feature:2906580-2906670:1:exon
so has part: feature:2909313-2909599:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2871410-2871713:1:exon

position:2871713:1
position: 2871713
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2876315-2876516:1:exon

position:2876315:1
position: 2876315
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2876516:1
position: 2876516
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2906224-2906365:1:exon

position:2906224:1
position: 2906224
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2906365:1
position: 2906365
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2906580-2906670:1:exon

position:2906580:1
position: 2906580
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2906670:1
position: 2906670
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2909313-2909599:1:exon

position:2909313:1
position: 2909313
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC116660726
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 419612
gene: LOC116660726
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC116660726
translation: MGSAASRTPREPSGTQGDAASTGAPLLAPAGPRTARRPRPARPPSARGRRAGTAAAPPAAGTLPAPCSPLRSAAEPGGRQAALRRLPHSRPAVGCRRRRSAAPCPVAGSGAAVLIITGATVRTEPAPRQGSQRSGDSRVLRVRPGSRCSAQRPASARGLPRQSKRLCLCLGTWPARAFTAAAAASWVPALPGRLLAADYQGIAVVREELLKVARSLLRGTILQYEETLMEVMPEVCRLPRHNYGSPCILEIFQLQMKDVVEYAEQTTACFQNLREVGDAVLSCLPRQQRLVGAQPRPGPGGPRPGVVGEGRFRSLIYWDH
SIO_010081: LOC116660726
subclass of: SO_0000673
so part of: LOC116660726
location: join(2871410..2871713,2876315..2876516,2906224..2906365,2906580..2906670,2909313..2909536)
location: region:2871410-2909536:1
so has part: feature:2871410-2871713:1:exon
so has part: feature:2876315-2876516:1:exon
so has part: feature:2906224-2906365:1:exon
so has part: feature:2906580-2906670:1:exon
so has part: feature:2909313-2909536:1:exon

XP_032326717.1
type: Protein
SIO_000068: ncbiprotein

position:2909536:1
position: 2909536
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2871410-2871713:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2876315-2876516:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2906224-2906365:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2906580-2906670:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2909313-2909536:1:exon

LOC102510293
type: Gene
subclass of: SO_0000704
RO_0002162: 419612
gene: LOC102510293
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2923524..2975593)
location: region:2923524-2975593:-1
so has part: feature:2923524-2975593:-1:exon
subclass of: SO_0000010

102510293
type: Gene
SIO_000068: ncbigene

position:2923524:-1
position: 2923524
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2975593:-1
position: 2975593
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2923524-2975593:-1:exon

LOC102510293
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 419612
gene: LOC102510293
product: ankyrin repeat domain-containing protein 26-like
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; deleted 2 bases in 2 codons; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 97% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_032470827.1
SIO_010081: LOC102510293
subclass of: SO_0000673
so part of: LOC102510293
location: complement(join(2923524..2923804,2924953..2924994,2929679..2929890,2931482..2931673,2932252..2932617,2938901..2939052,2939796..2940309,2941742..2941879,2942724..2942907,2944101..2944312,2946450..2946591,2946867..2946900,2947358..2947364,2955658..2955912,2957670..2957742,2957929..2957957,2958580..2958618,2960387..2960480,2964771..2964840,2965216..2965267,2965880..2966026,2968094..2968176,2969610..2969747,2971052..2971158,2974257..2974430,2974595..2974709,2975367..2975593))
location: region:2923524-2975593:-1
so has part: feature:2975367-2975593:-1:exon
so has part: feature:2974595-2974709:-1:exon
so has part: feature:2974257-2974430:-1:exon
so has part: feature:2971052-2971158:-1:exon
so has part: feature:2969610-2969747:-1:exon
so has part: feature:2968094-2968176:-1:exon
so has part: feature:2965880-2966026:-1:exon
so has part: feature:2965216-2965267:-1:exon
so has part: feature:2964771-2964840:-1:exon
so has part: feature:2960387-2960480:-1:exon
so has part: feature:2958580-2958618:-1:exon
so has part: feature:2957929-2957957:-1:exon
so has part: feature:2957670-2957742:-1:exon
so has part: feature:2955658-2955912:-1:exon
so has part: feature:2947358-2947364:-1:exon
so has part: feature:2946867-2946900:-1:exon
so has part: feature:2946450-2946591:-1:exon
so has part: feature:2944101-2944312:-1:exon
so has part: feature:2942724-2942907:-1:exon
so has part: feature:2941742-2941879:-1:exon
so has part: feature:2939796-2940309:-1:exon
so has part: feature:2938901-2939052:-1:exon
so has part: feature:2932252-2932617:-1:exon
so has part: feature:2931482-2931673:-1:exon
so has part: feature:2929679-2929890:-1:exon
so has part: feature:2924953-2924994:-1:exon
so has part: feature:2923524-2923804:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2975367-2975593:-1:exon

position:2975367:-1
position: 2975367
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2974595-2974709:-1:exon

position:2974595:-1
position: 2974595
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2974709:-1
position: 2974709
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2974257-2974430:-1:exon

position:2974257:-1
position: 2974257
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2974430:-1
position: 2974430
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2971052-2971158:-1:exon

position:2971052:-1
position: 2971052
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2971158:-1
position: 2971158
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2969610-2969747:-1:exon

position:2969610:-1
position: 2969610
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2969747:-1
position: 2969747
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2968094-2968176:-1:exon

position:2968094:-1
position: 2968094
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2968176:-1
position: 2968176
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:2965880-2966026:-1:exon

position:2965880:-1
position: 2965880
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2966026:-1
position: 2966026
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:2965216-2965267:-1:exon

position:2965216:-1
position: 2965216
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2965267:-1
position: 2965267
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:2964771-2964840:-1:exon

position:2964771:-1
position: 2964771
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2964840:-1
position: 2964840
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:2960387-2960480:-1:exon

position:2960387:-1
position: 2960387
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2960480:-1
position: 2960480
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:2958580-2958618:-1:exon

position:2958580:-1
position: 2958580
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2958618:-1
position: 2958618
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:2957929-2957957:-1:exon

position:2957929:-1
position: 2957929
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2957957:-1
position: 2957957
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:2957670-2957742:-1:exon

position:2957670:-1
position: 2957670
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2957742:-1
position: 2957742
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:2955658-2955912:-1:exon

position:2955658:-1
position: 2955658
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2955912:-1
position: 2955912
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:2947358-2947364:-1:exon

position:2947358:-1
position: 2947358
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2947364:-1
position: 2947364
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:2946867-2946900:-1:exon

position:2946867:-1
position: 2946867
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2946900:-1
position: 2946900
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:2946450-2946591:-1:exon

position:2946450:-1
position: 2946450
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2946591:-1
position: 2946591
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:2944101-2944312:-1:exon

position:2944101:-1
position: 2944101
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2944312:-1
position: 2944312
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:2942724-2942907:-1:exon

position:2942724:-1
position: 2942724
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2942907:-1
position: 2942907
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:2941742-2941879:-1:exon

position:2941742:-1
position: 2941742
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2941879:-1
position: 2941879
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:2939796-2940309:-1:exon

position:2939796:-1
position: 2939796
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2940309:-1
position: 2940309
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:2938901-2939052:-1:exon

position:2938901:-1
position: 2938901
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2939052:-1
position: 2939052
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:2932252-2932617:-1:exon

position:2932252:-1
position: 2932252
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2932617:-1
position: 2932617
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:2931482-2931673:-1:exon

position:2931482:-1
position: 2931482
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2931673:-1
position: 2931673
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:2929679-2929890:-1:exon

position:2929679:-1
position: 2929679
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2929890:-1
position: 2929890
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 26
SIO_000628: feature:2924953-2924994:-1:exon

position:2924953:-1
position: 2924953
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2924994:-1
position: 2924994
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 27
SIO_000628: feature:2923524-2923804:-1:exon

position:2923804:-1
position: 2923804
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC102510293
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 419612
gene: LOC102510293
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; deleted 2 bases in 2 codons; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: ankyrin repeat domain-containing protein 26-like
translation: MKKRLAKFASWVDFSIHQRERGNHKKPVPGYHVYRSELKEFHKAAYLGDTHTVQELLSRKKNVDSRDRKNRTALHLACASGQSSVVALLTQWKCDLDARDEESRTALIKAVQCRKEECVTILLKQGADPNLEDNFQNTALHYAVLAENTSIAAELLHYKANIEAINQYNFTPFLVAVRENKEEMVKFLIENGANVHAVDMLQRSALMLAVFHDSPDIVKLLLQKHVNACSLDFQGWSAERYACRNGFKHLYQQIVDYREEKIPNTPPQNSDLGQSSAKESLPSSHTGAENIQEKLQLSGKDDEEMVELGTSNGSCMDSLKNVEQKMDLVVEVSPSNEDISVIRVSPKHDIDDSRPPSDEDLDLAPKSTSKIQLPNHVDHLSGAAGLREKNTLNGQIEMDQETLMARGSKKYSTEKYPHLKPAVGVKDSVPNKTGEMKNLQRLKSDPSDWDSTSLSLNNEAGQRAEHLKVDKCPLVSQSVTTNQSAPTELRQTAIVDKDRMNIEAMSLSENAALRGLCEPQLPENRSSQEGLLFSKKTSTEKDQVKEQMNSVDGLDDLTLAPETASEDCESLSPDYKNTLRLIEQLGPESKDSDRLLKIQDPVDSFRPTELKESDCALLRGKIKEMENKVNWLHTELLKTREAKSQLKLKNVSGNKSSATLRFTLEQETKKKENAYTLYEKSKDDLKRKEKQYNEQFYLKQQLEITARALECKLKSIRNKPNQVLEEQNDAQRQLSREQNARVIQDEILAHRLSQQKEAEKANKKMNAEDTMDFELSDPKDSSEVLPQQLPEDESQFRGPEIELHPRRDALRPTTLVLECVHRDRGQAQRSNKETEAFSQSKQGEVNKYIGKQQFLKEKVCKLQSENMLLRQQLEVAQNEARSEKTILNIPELFLDHMGKLEAMSRRVLMLEEENKELINECRYLKDRLYQCEMDRAEMEAHMRQLQQELTDTXKKVSMLEASLEVTAHHQTNSENKRRDGERKSHQTANPNADLPAKEESTSSVLLHLSAETQLLLKELVSMKEMQKKCETLEKEKKKLEEEVLNLRGHL
SIO_010081: LOC102510293
subclass of: SO_0000673
so part of: LOC102510293
location: complement(join(2932435..2932617,2938901..2939052,2939796..2940309,2941742..2941879,2942724..2942907,2944101..2944312,2946450..2946591,2946867..2946900,2947358..2947364,2955658..2955912,2957670..2957742,2957929..2957957,2958580..2958618,2960387..2960480,2964771..2964840,2965216..2965267,2965880..2966026,2968094..2968176,2969610..2969747,2971052..2971158,2974257..2974430,2974595..2974709,2975367..2975578))
location: region:2932435-2975578:-1
so has part: feature:2975367-2975578:-1:exon
so has part: feature:2974595-2974709:-1:exon
so has part: feature:2974257-2974430:-1:exon
so has part: feature:2971052-2971158:-1:exon
so has part: feature:2969610-2969747:-1:exon
so has part: feature:2968094-2968176:-1:exon
so has part: feature:2965880-2966026:-1:exon
so has part: feature:2965216-2965267:-1:exon
so has part: feature:2964771-2964840:-1:exon
so has part: feature:2960387-2960480:-1:exon
so has part: feature:2958580-2958618:-1:exon
so has part: feature:2957929-2957957:-1:exon
so has part: feature:2957670-2957742:-1:exon
so has part: feature:2955658-2955912:-1:exon
so has part: feature:2947358-2947364:-1:exon
so has part: feature:2946867-2946900:-1:exon
so has part: feature:2946450-2946591:-1:exon
so has part: feature:2944101-2944312:-1:exon
so has part: feature:2942724-2942907:-1:exon
so has part: feature:2941742-2941879:-1:exon
so has part: feature:2939796-2940309:-1:exon
so has part: feature:2938901-2939052:-1:exon
so has part: feature:2932435-2932617:-1:exon

XP_032326718.1
type: Protein
SIO_000068: ncbiprotein

position:2932435:-1
position: 2932435
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2975578:-1
position: 2975578
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2975367-2975578:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2974595-2974709:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2974257-2974430:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2971052-2971158:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2969610-2969747:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2968094-2968176:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2965880-2966026:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2965216-2965267:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2964771-2964840:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2960387-2960480:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2958580-2958618:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2957929-2957957:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2957670-2957742:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2955658-2955912:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2947358-2947364:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2946867-2946900:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:2946450-2946591:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:2944101-2944312:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:2942724-2942907:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:2941742-2941879:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:2939796-2940309:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:2938901-2939052:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:2932435-2932617:-1:exon

LOC116660808
type: Gene
subclass of: SO_0000704
RO_0002162: 419612
gene: LOC116660808
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2975525..3033383)
location: region:2975525-3033383:-1
so has part: feature:2975525-3033383:-1:exon
subclass of: SO_0000010

116660808
type: Gene
SIO_000068: ncbigene

position:2975525:-1
position: 2975525
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3033383:-1
position: 3033383
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2975525-3033383:-1:exon

LOC116660808
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 419612
gene: LOC116660808
product: adhesion G protein-coupled receptor B1-like, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
transcript id: XM_032471102.1
SIO_010081: LOC116660808
subclass of: SO_0000673
so part of: LOC116660808
location: complement(join(2975525..2975650,2978963..2978998,2981007..2981144,3032883..3033383))
location: region:2975525-3033383:-1
so has part: feature:3032883-3033383:-1:exon
so has part: feature:2981007-2981144:-1:exon
so has part: feature:2978963-2978998:-1:exon
so has part: feature:2975525-2975650:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3032883-3033383:-1:exon

position:3032883:-1
position: 3032883
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2981007-2981144:-1:exon

position:2981007:-1
position: 2981007
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2981144:-1
position: 2981144
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2978963-2978998:-1:exon

position:2978963:-1
position: 2978963
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2978998:-1
position: 2978998
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2975525-2975650:-1:exon

position:2975650:-1
position: 2975650
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC116660808
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 419612
gene: LOC116660808
product: adhesion G protein-coupled receptor B1-like, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_032471103.1
SIO_010081: LOC116660808
subclass of: SO_0000673
so part of: LOC116660808
location: complement(join(2975533..2975650,2978963..2979012,2981007..2981144,3032883..3033383))
location: region:2975533-3033383:-1
so has part: feature:3032883-3033383:-1:exon
so has part: feature:2981007-2981144:-1:exon
so has part: feature:2978963-2979012:-1:exon
so has part: feature:2975533-2975650:-1:exon

position:2975533:-1
position: 2975533
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3032883-3033383:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2981007-2981144:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2978963-2979012:-1:exon

position:2979012:-1
position: 2979012
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2975533-2975650:-1:exon

LOC116660808
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 419612
gene: LOC116660808
product: adhesion G protein-coupled receptor B1-like, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns
transcript id: XM_032471104.1
SIO_010081: LOC116660808
subclass of: SO_0000673
so part of: LOC116660808
location: complement(join(2975552..2975650,2981007..2981144,3032883..3033383))
location: region:2975552-3033383:-1
so has part: feature:3032883-3033383:-1:exon
so has part: feature:2981007-2981144:-1:exon
so has part: feature:2975552-2975650:-1:exon

position:2975552:-1
position: 2975552
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3032883-3033383:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2981007-2981144:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2975552-2975650:-1:exon

LOC116660808
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 419612
gene: LOC116660808
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: adhesion G protein-coupled receptor B1-like isoform X3
translation: MLVQGKFFGYFLVATEFSANASCCSWTLCKPNLHRYKLCMKVAKVPACSSPACVRIYQLDSFLESTPSYLGLENCDEVLRLCNSSVPLAFLQASKQFLQIKRQQMTPGPRAGPSHPSDSFSVEHLVMGNHNPRDLAGGPENCLTSLTQDGVGMRSSGERTGQKCPSVQSTEQRERWLDPAPGWCSSATCVRCLWLARGPRNLASAEIGRWQEARREVSGVGRR
SIO_010081: LOC116660808
subclass of: SO_0000673
so part of: LOC116660808
location: complement(join(2975584..2975650,2981007..2981144,3032883..3033349))
location: region:2975584-3033349:-1
so has part: feature:3032883-3033349:-1:exon
so has part: feature:2981007-2981144:-1:exon
so has part: feature:2975584-2975650:-1:exon

XP_032326995.1
type: Protein
SIO_000068: ncbiprotein

position:2975584:-1
position: 2975584
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3033349:-1
position: 3033349
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3032883-3033349:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2981007-2981144:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2975584-2975650:-1:exon

LOC116660808
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 419612
gene: LOC116660808
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: adhesion G protein-coupled receptor B1-like isoform X1
translation: MLVQGKFFGYFLVATEFSANASCCSWTLCKPNLHRYKLCMKVAKVPACSSPACVRIYQLDSFLESTPSYLGLENCDEVLRLCNSSVPLAFLQASKQFLQIKRQQMTPGPRAGPSHPSDSFSVEHLVMGNHNPRDLAGGPENCLTSLTQDGVGMRSSGERTGQKCPSVQSTEQRERWLDPAPGWCSSATCVRCLWLARGPRNLRERARPGEGRPSASAEIGRWQEARREVSGVGRR
SIO_010081: LOC116660808
subclass of: SO_0000673
so part of: LOC116660808
location: complement(join(2975584..2975650,2978963..2978998,2981007..2981144,3032883..3033349))
location: region:2975584-3033349:-1
so has part: feature:3032883-3033349:-1:exon
so has part: feature:2981007-2981144:-1:exon
so has part: feature:2978963-2978998:-1:exon
so has part: feature:2975584-2975650:-1:exon

XP_032326993.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3032883-3033349:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2981007-2981144:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2978963-2978998:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2975584-2975650:-1:exon

LOC116660808
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 419612
gene: LOC116660808
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: adhesion G protein-coupled receptor B1-like isoform X2
translation: MLVQGKFFGYFLVATEFSANASCCSWTLCKPNLHRYKLCMKVAKVPACSSPACVRIYQLDSFLESTPSYLGLENCDEVLRLCNSSVPLAFLQASKQFLQIKRQQMTPGPRAGPSHPSDSFSVEHLVMGNHNPRDLAGGPENCLTSLTQDGVGMRSSGERTGQKCPSVQSTEQRERWLDPAPGWCSSATCVRCLWLARGPRNLLTSPGERGQDQEKAGPAPALRSGGGKRPGGK
SIO_010081: LOC116660808
subclass of: SO_0000673
so part of: LOC116660808
location: complement(join(2975604..2975650,2978963..2979012,2981007..2981144,3032883..3033349))
location: region:2975604-3033349:-1
so has part: feature:3032883-3033349:-1:exon
so has part: feature:2981007-2981144:-1:exon
so has part: feature:2978963-2979012:-1:exon
so has part: feature:2975604-2975650:-1:exon

XP_032326994.1
type: Protein
SIO_000068: ncbiprotein

position:2975604:-1
position: 2975604
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3032883-3033349:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2981007-2981144:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2978963-2979012:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2975604-2975650:-1:exon

LOC116660808
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 419612
gene: LOC116660808
product: adhesion G protein-coupled receptor B1-like, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 16 samples with support for all annotated introns
transcript id: XM_032471105.1
SIO_010081: LOC116660808
subclass of: SO_0000673
so part of: LOC116660808
location: complement(join(2978578..2978867,2978931..2978998,2981007..2981144,3032883..3033383))
location: region:2978578-3033383:-1
so has part: feature:3032883-3033383:-1:exon
so has part: feature:2981007-2981144:-1:exon
so has part: feature:2978931-2978998:-1:exon
so has part: feature:2978578-2978867:-1:exon

position:2978578:-1
position: 2978578
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3032883-3033383:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2981007-2981144:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2978931-2978998:-1:exon

position:2978931:-1
position: 2978931
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2978578-2978867:-1:exon

position:2978867:-1
position: 2978867
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC116660808
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 419612
gene: LOC116660808
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: adhesion G protein-coupled receptor B1-like isoform X4
translation: MLVQGKFFGYFLVATEFSANASCCSWTLCKPNLHRYKLCMKVAKVPACSSPACVRIYQLDSFLESTPSYLGLENCDEVLRLCNSSVPLAFLQASKQFLQIKRQQMTPGPRAGPSHPSDSFSVEHLVMGNHNPRDLAGGPENCLTSLTQDGVGMRSSGERTGQKCPSVQSTEQRERWLDPAPGWCSSATCVRCLWLARGPRNLRERARPGEGRPR
SIO_010081: LOC116660808
subclass of: SO_0000673
so part of: LOC116660808
location: complement(join(2978959..2978998,2981007..2981144,3032883..3033349))
location: region:2978959-3033349:-1
so has part: feature:3032883-3033349:-1:exon
so has part: feature:2981007-2981144:-1:exon
so has part: feature:2978959-2978998:-1:exon

XP_032326996.1
type: Protein
SIO_000068: ncbiprotein

position:2978959:-1
position: 2978959
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3032883-3033349:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2981007-2981144:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2978959-2978998:-1:exon

LOC116660811
type: Gene
subclass of: SO_0000704
RO_0002162: 419612
gene: LOC116660811
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2982494..3007252)
location: region:2982494-3007252:-1
so has part: feature:2982494-3007252:-1:exon
subclass of: SO_0000011

116660811
type: Gene
SIO_000068: ncbigene

position:2982494:-1
position: 2982494
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3007252:-1
position: 3007252
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2982494-3007252:-1:exon

LOC116660811
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 419612
nc RNA class: lncRNA
gene: LOC116660811
product: uncharacterized LOC116660811
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 19 samples with support for all annotated introns
transcript id: XR_004316455.1
SIO_010081: LOC116660811
subclass of: SO_0000673
so part of: LOC116660811
location: complement(join(2982494..2983042,2983169..2983643,3007127..3007252))
location: region:2982494-3007252:-1
so has part: feature:3007127-3007252:-1:exon
so has part: feature:2983169-2983643:-1:exon
so has part: feature:2982494-2983042:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3007127-3007252:-1:exon

position:3007127:-1
position: 3007127
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2983169-2983643:-1:exon

position:2983169:-1
position: 2983169
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2983643:-1
position: 2983643
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2982494-2983042:-1:exon

position:2983042:-1
position: 2983042
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC116660806
type: Gene
subclass of: SO_0000704
RO_0002162: 419612
gene: LOC116660806
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: complement(2990175..2997906)
location: region:2990175-2997906:-1
so has part: feature:2990175-2997906:-1:exon

116660806
type: Gene
SIO_000068: ncbigene

position:2990175:-1
position: 2990175
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2997906:-1
position: 2997906
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2990175-2997906:-1:exon

LOC116660806
type: Exon
subclass of: SO_0000147
RO_0002162: 419612
gene: LOC116660806
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC116660806
subclass of: SO_0000673
so part of: LOC116660806
location: complement(2990175..2997906)
location: region:2990175-2997906:-1
so has part: feature:2990175-2997906:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2990175-2997906:-1:exon

LOC106730781
type: Gene
subclass of: SO_0000704
RO_0002162: 419612
gene: LOC106730781
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(3033564..3073635)
location: region:3033564-3073635:-1
so has part: feature:3033564-3073635:-1:exon
subclass of: SO_0000010

106730781
type: Gene
SIO_000068: ncbigene

position:3033564:-1
position: 3033564
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3073635:-1
position: 3073635
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3033564-3073635:-1:exon

LOC106730781
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 419612
gene: LOC106730781
product: adhesion G protein-coupled receptor B1-like, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 37 samples with support for all annotated introns
transcript id: XM_032471112.1
SIO_010081: LOC106730781
subclass of: SO_0000673
so part of: LOC106730781
location: complement(join(3033564..3033699,3038617..3039432,3040522..3040780,3042281..3042370,3051912..3052064,3060498..3060669,3068441..3068585,3073500..3073635))
location: region:3033564-3073635:-1
so has part: feature:3073500-3073635:-1:exon
so has part: feature:3068441-3068585:-1:exon
so has part: feature:3060498-3060669:-1:exon
so has part: feature:3051912-3052064:-1:exon
so has part: feature:3042281-3042370:-1:exon
so has part: feature:3040522-3040780:-1:exon
so has part: feature:3038617-3039432:-1:exon
so has part: feature:3033564-3033699:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3073500-3073635:-1:exon

position:3073500:-1
position: 3073500
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3068441-3068585:-1:exon

position:3068441:-1
position: 3068441
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3068585:-1
position: 3068585
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3060498-3060669:-1:exon

position:3060498:-1
position: 3060498
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3060669:-1
position: 3060669
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3051912-3052064:-1:exon

position:3051912:-1
position: 3051912
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3052064:-1
position: 3052064
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:3042281-3042370:-1:exon

position:3042281:-1
position: 3042281
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3042370:-1
position: 3042370
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:3040522-3040780:-1:exon

position:3040522:-1
position: 3040522
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3040780:-1
position: 3040780
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:3038617-3039432:-1:exon

position:3038617:-1
position: 3038617
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3039432:-1
position: 3039432
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:3033564-3033699:-1:exon

position:3033699:-1
position: 3033699
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC106730781
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 419612
gene: LOC106730781
product: adhesion G protein-coupled receptor B1-like, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 43 samples with support for all annotated introns
transcript id: XM_032471108.1
SIO_010081: LOC106730781
subclass of: SO_0000673
so part of: LOC106730781
location: complement(join(3033564..3033699,3038617..3039432,3040522..3040780,3042281..3042370,3051912..3052064,3058631..3058774,3060498..3060669,3068441..3068585,3073500..3073635))
location: region:3033564-3073635:-1
so has part: feature:3073500-3073635:-1:exon
so has part: feature:3068441-3068585:-1:exon
so has part: feature:3060498-3060669:-1:exon
so has part: feature:3058631-3058774:-1:exon
so has part: feature:3051912-3052064:-1:exon
so has part: feature:3042281-3042370:-1:exon
so has part: feature:3040522-3040780:-1:exon
so has part: feature:3038617-3039432:-1:exon
so has part: feature:3033564-3033699:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3073500-3073635:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3068441-3068585:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3060498-3060669:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3058631-3058774:-1:exon

position:3058631:-1
position: 3058631
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3058774:-1
position: 3058774
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:3051912-3052064:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3042281-3042370:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3040522-3040780:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3038617-3039432:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3033564-3033699:-1:exon

LOC106730781
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 419612
gene: LOC106730781
product: adhesion G protein-coupled receptor B1-like, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 27 samples with support for all annotated introns
transcript id: XM_032471110.1
SIO_010081: LOC106730781
subclass of: SO_0000673
so part of: LOC106730781
location: complement(join(3033564..3033699,3038617..3039432,3040522..3040780,3042281..3042370,3051912..3052064,3058631..3058774,3059487..3059571,3060498..3060669,3068441..3068585,3073500..3073635))
location: region:3033564-3073635:-1
so has part: feature:3073500-3073635:-1:exon
so has part: feature:3068441-3068585:-1:exon
so has part: feature:3060498-3060669:-1:exon
so has part: feature:3059487-3059571:-1:exon
so has part: feature:3058631-3058774:-1:exon
so has part: feature:3051912-3052064:-1:exon
so has part: feature:3042281-3042370:-1:exon
so has part: feature:3040522-3040780:-1:exon
so has part: feature:3038617-3039432:-1:exon
so has part: feature:3033564-3033699:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3073500-3073635:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3068441-3068585:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3060498-3060669:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3059487-3059571:-1:exon

position:3059487:-1
position: 3059487
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3059571:-1
position: 3059571
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:3058631-3058774:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3051912-3052064:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3042281-3042370:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3040522-3040780:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3038617-3039432:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3033564-3033699:-1:exon

LOC106730781
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 419612
gene: LOC106730781
product: adhesion G protein-coupled receptor B1-like, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 22 samples with support for all annotated introns
transcript id: XM_032471111.1
SIO_010081: LOC106730781
subclass of: SO_0000673
so part of: LOC106730781
location: complement(join(3033564..3033699,3038617..3039432,3040522..3040780,3042281..3042370,3051912..3052064,3058631..3058774,3060498..3060669,3068441..3068585,3068761..3068938,3073500..3073632))
location: region:3033564-3073632:-1
so has part: feature:3073500-3073632:-1:exon
so has part: feature:3068761-3068938:-1:exon
so has part: feature:3068441-3068585:-1:exon
so has part: feature:3060498-3060669:-1:exon
so has part: feature:3058631-3058774:-1:exon
so has part: feature:3051912-3052064:-1:exon
so has part: feature:3042281-3042370:-1:exon
so has part: feature:3040522-3040780:-1:exon
so has part: feature:3038617-3039432:-1:exon
so has part: feature:3033564-3033699:-1:exon

position:3073632:-1
position: 3073632
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3073500-3073632:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3068761-3068938:-1:exon

position:3068761:-1
position: 3068761
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3068938:-1
position: 3068938
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3068441-3068585:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3060498-3060669:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3058631-3058774:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3051912-3052064:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3042281-3042370:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3040522-3040780:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3038617-3039432:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3033564-3033699:-1:exon

LOC106730781
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 419612
gene: LOC106730781
product: adhesion G protein-coupled receptor B1-like, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 43 samples with support for all annotated introns
transcript id: XM_032471113.1
SIO_010081: LOC106730781
subclass of: SO_0000673
so part of: LOC106730781
location: complement(join(3033564..3033699,3038617..3039432,3040522..3040780,3042281..3042370,3073500..3073601))
location: region:3033564-3073601:-1
so has part: feature:3073500-3073601:-1:exon
so has part: feature:3042281-3042370:-1:exon
so has part: feature:3040522-3040780:-1:exon
so has part: feature:3038617-3039432:-1:exon
so has part: feature:3033564-3033699:-1:exon

position:3073601:-1
position: 3073601
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3073500-3073601:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3042281-3042370:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3040522-3040780:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3038617-3039432:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3033564-3033699:-1:exon

LOC106730781
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 419612
gene: LOC106730781
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: adhesion G protein-coupled receptor B1-like
translation: MGFPSAAAAAAAWAPAKCGLRDGCASLGGPCPMLVQDKFFKYFLAATEFSANASCCSWTLCKPNLHRYKLCMKVAKVPACSSPACVRIYQLDSFLESTPSYLGLENCDEVLRLCNSSVPLAFLQASKQFLQIKRQQMTPGPRAGPSHPSDSFSVEHLVMGNHNPRDLAGGPENCLTSLTQDGVGMRSSCRWQPQAGVQSPDVRSHCCPLVA
SIO_010081: LOC106730781
subclass of: SO_0000673
so part of: LOC106730781
location: complement(join(3033627..3033699,3038617..3039179))
location: region:3033627-3039179:-1
so has part: feature:3038617-3039179:-1:exon
so has part: feature:3033627-3033699:-1:exon

XP_032326999.1
type: Protein
SIO_000068: ncbiprotein

position:3033627:-1
position: 3033627
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3039179:-1
position: 3039179
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3038617-3039179:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3033627-3033699:-1:exon

LOC106730781
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 419612
gene: LOC106730781
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: adhesion G protein-coupled receptor B1-like
translation: MGFPSAAAAAAAWAPAKCGLRDGCASLGGPCPMLVQDKFFKYFLAATEFSANASCCSWTLCKPNLHRYKLCMKVAKVPACSSPACVRIYQLDSFLESTPSYLGLENCDEVLRLCNSSVPLAFLQASKQFLQIKRQQMTPGPRAGPSHPSDSFSVEHLVMGNHNPRDLAGGPENCLTSLTQDGVGMRSSCRWQPQAGVQSPDVRSHCCPLVA
SIO_010081: LOC106730781
subclass of: SO_0000673
so part of: LOC106730781
location: complement(join(3033627..3033699,3038617..3039179))
location: region:3033627-3039179:-1
so has part: feature:3038617-3039179:-1:exon
so has part: feature:3033627-3033699:-1:exon

XP_032327001.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3038617-3039179:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3033627-3033699:-1:exon

LOC106730781
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 419612
gene: LOC106730781
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: adhesion G protein-coupled receptor B1-like
translation: MGFPSAAAAAAAWAPAKCGLRDGCASLGGPCPMLVQDKFFKYFLAATEFSANASCCSWTLCKPNLHRYKLCMKVAKVPACSSPACVRIYQLDSFLESTPSYLGLENCDEVLRLCNSSVPLAFLQASKQFLQIKRQQMTPGPRAGPSHPSDSFSVEHLVMGNHNPRDLAGGPENCLTSLTQDGVGMRSSCRWQPQAGVQSPDVRSHCCPLVA
SIO_010081: LOC106730781
subclass of: SO_0000673
so part of: LOC106730781
location: complement(join(3033627..3033699,3038617..3039179))
location: region:3033627-3039179:-1
so has part: feature:3038617-3039179:-1:exon
so has part: feature:3033627-3033699:-1:exon

XP_032327002.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3038617-3039179:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3033627-3033699:-1:exon

LOC106730781
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 419612
gene: LOC106730781
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: adhesion G protein-coupled receptor B1-like
translation: MGFPSAAAAAAAWAPAKCGLRDGCASLGGPCPMLVQDKFFKYFLAATEFSANASCCSWTLCKPNLHRYKLCMKVAKVPACSSPACVRIYQLDSFLESTPSYLGLENCDEVLRLCNSSVPLAFLQASKQFLQIKRQQMTPGPRAGPSHPSDSFSVEHLVMGNHNPRDLAGGPENCLTSLTQDGVGMRSSCRWQPQAGVQSPDVRSHCCPLVA
SIO_010081: LOC106730781
subclass of: SO_0000673
so part of: LOC106730781
location: complement(join(3033627..3033699,3038617..3039179))
location: region:3033627-3039179:-1
so has part: feature:3038617-3039179:-1:exon
so has part: feature:3033627-3033699:-1:exon

XP_032327003.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3038617-3039179:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3033627-3033699:-1:exon

LOC106730781
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 419612
gene: LOC106730781
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: adhesion G protein-coupled receptor B1-like
translation: MGFPSAAAAAAAWAPAKCGLRDGCASLGGPCPMLVQDKFFKYFLAATEFSANASCCSWTLCKPNLHRYKLCMKVAKVPACSSPACVRIYQLDSFLESTPSYLGLENCDEVLRLCNSSVPLAFLQASKQFLQIKRQQMTPGPRAGPSHPSDSFSVEHLVMGNHNPRDLAGGPENCLTSLTQDGVGMRSSCRWQPQAGVQSPDVRSHCCPLVA
SIO_010081: LOC106730781
subclass of: SO_0000673
so part of: LOC106730781
location: complement(join(3033627..3033699,3038617..3039179))
location: region:3033627-3039179:-1
so has part: feature:3038617-3039179:-1:exon
so has part: feature:3033627-3033699:-1:exon

XP_032327004.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3038617-3039179:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3033627-3033699:-1:exon

LOC116660727
type: Gene
subclass of: SO_0000704
RO_0002162: 419612
gene: LOC116660727
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 3085966..3087644
location: region:3085966-3087644:1
so has part: feature:3085966-3087644:1:exon
subclass of: SO_0000010

116660727
type: Gene
SIO_000068: ncbigene

position:3085966:1
position: 3085966
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3087644:1
position: 3087644
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3085966-3087644:1:exon

LOC116660727
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 419612
gene: LOC116660727
product: synapsin-1-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 67% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_032470829.1
SIO_010081: LOC116660727
subclass of: SO_0000673
so part of: LOC116660727
location: join(3085966..3086161,3086237..3086474,3086845..3087313,3087549..3087644)
location: region:3085966-3087644:1
so has part: feature:3085966-3086161:1:exon
so has part: feature:3086237-3086474:1:exon
so has part: feature:3086845-3087313:1:exon
so has part: feature:3087549-3087644:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3085966-3086161:1:exon

position:3086161:1
position: 3086161
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3086237-3086474:1:exon

position:3086237:1
position: 3086237
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3086474:1
position: 3086474
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3086845-3087313:1:exon

position:3086845:1
position: 3086845
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3087313:1
position: 3087313
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3087549-3087644:1:exon

position:3087549:1
position: 3087549
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC116660727
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 419612
gene: LOC116660727
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: synapsin-1-like
translation: MPASQQQTDLKPVAGGTAGGRGRPQDRTRPRWEQIDRLPGADPSPRCRRCRRPRTLTAPLRLAGAGSNPGAHTGKHPSHRGGPVNAPNRARLPGAGHDPGPGRRYPGAVQRPPTSRGGTRFPKRGGEAATKARGSATANVAGWGGDARAGAHALRDTASGAERGRAGPSGAERGLARPCQAGPRGGGAGPPAAQDGPAGLPTPMPTPRQPTGSRPTIPSNTGPGPGRTPHSQVLRWTPHNPLTPVTAPGHTTSARHDSSPDRRDGAPSPHTEVPTPPTLCPITTPTPQSLQTKLNPHASAQGQDGLGLGHHGDSRQMGISRSVRAHSLVSSA
SIO_010081: LOC116660727
subclass of: SO_0000673
so part of: LOC116660727
location: join(3085966..3086161,3086237..3086474,3086845..3087313,3087549..3087644)
location: region:3085966-3087644:1
so has part: feature:3085966-3086161:1:exon
so has part: feature:3086237-3086474:1:exon
so has part: feature:3086845-3087313:1:exon
so has part: feature:3087549-3087644:1:exon

XP_032326720.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3085966-3086161:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3086237-3086474:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3086845-3087313:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3087549-3087644:1:exon

LOC102516686
type: Gene
subclass of: SO_0000704
RO_0002162: 419612
gene: LOC102516686
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(3098289..3156435)
location: region:3098289-3156435:-1
so has part: feature:3098289-3156435:-1:exon
subclass of: SO_0000010

102516686
type: Gene
SIO_000068: ncbigene

position:3098289:-1
position: 3098289
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3156435:-1
position: 3156435
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3098289-3156435:-1:exon

LOC102516686
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 419612
gene: LOC102516686
product: meiosis 1 arrest protein, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_032471099.1
SIO_010081: LOC102516686
subclass of: SO_0000673
so part of: LOC102516686
location: complement(join(3098289..3099184,3099699..3099710,3100187..3100327,3101411..3101617,3117060..3117201,3118120..3118282,3121984..3122157,3143108..3143276,3144001..3144186,3149258..3149547,3156365..3156435))
location: region:3098289-3156435:-1
so has part: feature:3156365-3156435:-1:exon
so has part: feature:3149258-3149547:-1:exon
so has part: feature:3144001-3144186:-1:exon
so has part: feature:3143108-3143276:-1:exon
so has part: feature:3121984-3122157:-1:exon
so has part: feature:3118120-3118282:-1:exon
so has part: feature:3117060-3117201:-1:exon
so has part: feature:3101411-3101617:-1:exon
so has part: feature:3100187-3100327:-1:exon
so has part: feature:3099699-3099710:-1:exon
so has part: feature:3098289-3099184:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3156365-3156435:-1:exon

position:3156365:-1
position: 3156365
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3149258-3149547:-1:exon

position:3149258:-1
position: 3149258
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3149547:-1
position: 3149547
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3144001-3144186:-1:exon

position:3144001:-1
position: 3144001
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3144186:-1
position: 3144186
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3143108-3143276:-1:exon

position:3143108:-1
position: 3143108
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3143276:-1
position: 3143276
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:3121984-3122157:-1:exon

position:3121984:-1
position: 3121984
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3122157:-1
position: 3122157
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:3118120-3118282:-1:exon

position:3118120:-1
position: 3118120
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3118282:-1
position: 3118282
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:3117060-3117201:-1:exon

position:3117060:-1
position: 3117060
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3117201:-1
position: 3117201
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:3101411-3101617:-1:exon

position:3101411:-1
position: 3101411
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3101617:-1
position: 3101617
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:3100187-3100327:-1:exon

position:3100187:-1
position: 3100187
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3100327:-1
position: 3100327
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:3099699-3099710:-1:exon

position:3099699:-1
position: 3099699
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3099710:-1
position: 3099710
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:3098289-3099184:-1:exon

position:3099184:-1
position: 3099184
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC102516686
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 419612
gene: LOC102516686
product: meiosis 1 arrest protein, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_032471101.1
SIO_010081: LOC102516686
subclass of: SO_0000673
so part of: LOC102516686
location: complement(join(3098289..3099184,3099699..3099710,3100187..3100327,3101411..3101617,3117060..3117201,3118120..3118282,3143108..3143276,3144001..3144186,3149258..3149692))
location: region:3098289-3149692:-1
so has part: feature:3149258-3149692:-1:exon
so has part: feature:3144001-3144186:-1:exon
so has part: feature:3143108-3143276:-1:exon
so has part: feature:3118120-3118282:-1:exon
so has part: feature:3117060-3117201:-1:exon
so has part: feature:3101411-3101617:-1:exon
so has part: feature:3100187-3100327:-1:exon
so has part: feature:3099699-3099710:-1:exon
so has part: feature:3098289-3099184:-1:exon

position:3149692:-1
position: 3149692
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3149258-3149692:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3144001-3144186:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3143108-3143276:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3118120-3118282:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3117060-3117201:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3101411-3101617:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3100187-3100327:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3099699-3099710:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3098289-3099184:-1:exon

LOC102516686
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 419612
gene: LOC102516686
product: meiosis 1 arrest protein, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_032471100.1
SIO_010081: LOC102516686
subclass of: SO_0000673
so part of: LOC102516686
location: complement(join(3098289..3099184,3100187..3100327,3101411..3101617,3117060..3117201,3118120..3118282,3121984..3122157,3143108..3143276,3144001..3144186,3149258..3149692))
location: region:3098289-3149692:-1
so has part: feature:3149258-3149692:-1:exon
so has part: feature:3144001-3144186:-1:exon
so has part: feature:3143108-3143276:-1:exon
so has part: feature:3121984-3122157:-1:exon
so has part: feature:3118120-3118282:-1:exon
so has part: feature:3117060-3117201:-1:exon
so has part: feature:3101411-3101617:-1:exon
so has part: feature:3100187-3100327:-1:exon
so has part: feature:3098289-3099184:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3149258-3149692:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3144001-3144186:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3143108-3143276:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3121984-3122157:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3118120-3118282:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3117060-3117201:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3101411-3101617:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3100187-3100327:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3098289-3099184:-1:exon

LOC102516686
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 419612
gene: LOC102516686
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: meiosis 1 arrest protein isoform X3
translation: MYHGQTTGKGPSHCMQIYQQPPRLLIVHITLPSWADVCSNLCEALQNFFSLACSLVGPSRMSLFSLYMVQNQHECILPFVQVKGNFARLQACISELRLLQREGCFRPQGISLQLAVEDGLQQLKQYSRHVTTGAALTYTSLEITVLTSQPGKEVVKQLEEGLKDTDLVRVRRLQVVEITKGVLGCMDSASPVEEPSSDVCLKCDLQERLLSPSLLPGTAGGSLRMDDPKGDFSTLYQMASQSSASRYKLRVIKALKSSGVCESLTYGLPFILRPTSCWQLDWDELETNQQHFHALCHSLLKREWLLLAKGEPPSRGHSLREAASTFYVILPSCSATLLVRAVATRELLLPSPFPLLPEDLPADSLRTVESVLDDLELEPTYNPLQVWSHLYPHLSSTFAKPQGQLHPSWESRGLRKHPCKAGQLQINRVRARVAPLPMTPAPGRAPKMPAASKASSAVFFPPSTEEEEEMEEEECPSGP
SIO_010081: LOC102516686
subclass of: SO_0000673
so part of: LOC102516686
location: complement(join(3099005..3099184,3099699..3099710,3100187..3100327,3101411..3101617,3117060..3117201,3118120..3118282,3143108..3143276,3144001..3144186,3149258..3149497))
location: region:3099005-3149497:-1
so has part: feature:3149258-3149497:-1:exon
so has part: feature:3144001-3144186:-1:exon
so has part: feature:3143108-3143276:-1:exon
so has part: feature:3118120-3118282:-1:exon
so has part: feature:3117060-3117201:-1:exon
so has part: feature:3101411-3101617:-1:exon
so has part: feature:3100187-3100327:-1:exon
so has part: feature:3099699-3099710:-1:exon
so has part: feature:3099005-3099184:-1:exon

XP_032326992.1
type: Protein
SIO_000068: ncbiprotein

position:3099005:-1
position: 3099005
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3149497:-1
position: 3149497
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3149258-3149497:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3144001-3144186:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3143108-3143276:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3118120-3118282:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3117060-3117201:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3101411-3101617:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3100187-3100327:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3099699-3099710:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3099005-3099184:-1:exon

LOC102516686
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 419612
gene: LOC102516686
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: meiosis 1 arrest protein isoform X2
translation: MYHGQTTGKGPSHCMQIYQQPPRLLIVHITLPSWADVCSNLCEALQNFFSLACSLVGPSRMSLFSLYMVQNQHECILPFVQVKGNFARLQACISELRLLQREGCFRPQGISLQLAVEDGLQQLKQYSRHVTTGAALTYTSLEITVLTSQPGKEVVKQLEEGLKDTDLVRVRRLQVVEITKGVLGCMDSASPVEEPSSDENSVLGTDIDLQTVDNDVVSMEMFFKAWLHNSGTDQEHVHLLLPSRCLSNISRARDNPMCLKCDLQERLLSPSLLPGTAGGSLRMDDPKGDFSTLYQMASQSSASRYKLRVIKALKSSGVCESLTYGLPFILRPTSCWQLDWDELETNQQHFHALCHSLLKREWLLLAKGEPPSRGHSLREAASTFYVILPSCSATLLVRAVATRELLLPSPFPLLPEDLPADSLRTVESVLDDLELEPTYNPLQVWSHLYPHLSSTFAKPQGQLHPSWESRGLRKAGQLQINRVRARVAPLPMTPAPGRAPKMPAASKASSAVFFPPSTEEEEEMEEEECPSGP
SIO_010081: LOC102516686
subclass of: SO_0000673
so part of: LOC102516686
location: complement(join(3099005..3099184,3100187..3100327,3101411..3101617,3117060..3117201,3118120..3118282,3121984..3122157,3143108..3143276,3144001..3144186,3149258..3149497))
location: region:3099005-3149497:-1
so has part: feature:3149258-3149497:-1:exon
so has part: feature:3144001-3144186:-1:exon
so has part: feature:3143108-3143276:-1:exon
so has part: feature:3121984-3122157:-1:exon
so has part: feature:3118120-3118282:-1:exon
so has part: feature:3117060-3117201:-1:exon
so has part: feature:3101411-3101617:-1:exon
so has part: feature:3100187-3100327:-1:exon
so has part: feature:3099005-3099184:-1:exon

XP_032326991.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3149258-3149497:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3144001-3144186:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3143108-3143276:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3121984-3122157:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3118120-3118282:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3117060-3117201:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3101411-3101617:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3100187-3100327:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3099005-3099184:-1:exon

LOC102516686
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 419612
gene: LOC102516686
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: meiosis 1 arrest protein isoform X1
translation: MYHGQTTGKGPSHCMQIYQQPPRLLIVHITLPSWADVCSNLCEALQNFFSLACSLVGPSRMSLFSLYMVQNQHECILPFVQVKGNFARLQACISELRLLQREGCFRPQGISLQLAVEDGLQQLKQYSRHVTTGAALTYTSLEITVLTSQPGKEVVKQLEEGLKDTDLVRVRRLQVVEITKGVLGCMDSASPVEEPSSDENSVLGTDIDLQTVDNDVVSMEMFFKAWLHNSGTDQEHVHLLLPSRCLSNISRARDNPMCLKCDLQERLLSPSLLPGTAGGSLRMDDPKGDFSTLYQMASQSSASRYKLRVIKALKSSGVCESLTYGLPFILRPTSCWQLDWDELETNQQHFHALCHSLLKREWLLLAKGEPPSRGHSLREAASTFYVILPSCSATLLVRAVATRELLLPSPFPLLPEDLPADSLRTVESVLDDLELEPTYNPLQVWSHLYPHLSSTFAKPQGQLHPSWESRGLRKHPCKAGQLQINRVRARVAPLPMTPAPGRAPKMPAASKASSAVFFPPSTEEEEEMEEEECPSGP
SIO_010081: LOC102516686
subclass of: SO_0000673
so part of: LOC102516686
location: complement(join(3099005..3099184,3099699..3099710,3100187..3100327,3101411..3101617,3117060..3117201,3118120..3118282,3121984..3122157,3143108..3143276,3144001..3144186,3149258..3149497))
location: region:3099005-3149497:-1
so has part: feature:3149258-3149497:-1:exon
so has part: feature:3144001-3144186:-1:exon
so has part: feature:3143108-3143276:-1:exon
so has part: feature:3121984-3122157:-1:exon
so has part: feature:3118120-3118282:-1:exon
so has part: feature:3117060-3117201:-1:exon
so has part: feature:3101411-3101617:-1:exon
so has part: feature:3100187-3100327:-1:exon
so has part: feature:3099699-3099710:-1:exon
so has part: feature:3099005-3099184:-1:exon

XP_032326990.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3149258-3149497:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3144001-3144186:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3143108-3143276:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3121984-3122157:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3118120-3118282:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3117060-3117201:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3101411-3101617:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3100187-3100327:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3099699-3099710:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3099005-3099184:-1:exon

LOC116660832
type: Gene
subclass of: SO_0000704
RO_0002162: 419612
gene: LOC116660832
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: 3114503..3114609
location: region:3114503-3114609:1
so has part: feature:3114503-3114609:1:exon
subclass of: SO_0000623

116660832
type: Gene
SIO_000068: ncbigene

position:3114503:1
position: 3114503
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3114609:1
position: 3114609
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3114503-3114609:1:exon

LOC116660832
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 419612
nc RNA class: snRNA
gene: LOC116660832
product: U6 spliceosomal RNA
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00026
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_004316485.1
SIO_010081: LOC116660832
subclass of: SO_0000673
so part of: LOC116660832
location: 3114503..3114609
location: region:3114503-3114609:1
so has part: feature:3114503-3114609:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3114503-3114609:1:exon

LOC102517195
type: Gene
subclass of: SO_0000704
RO_0002162: 419612
gene: LOC102517195
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(3164115..3166241)
location: region:3164115-3166241:-1
so has part: feature:3164115-3166241:-1:exon
subclass of: SO_0000011

102517195
type: Gene
SIO_000068: ncbigene

position:3164115:-1
position: 3164115
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3166241:-1
position: 3166241
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3164115-3166241:-1:exon

LOC102517195
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 419612
nc RNA class: lncRNA
gene: LOC102517195
product: uncharacterized LOC102517195
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XR_004316461.1
SIO_010081: LOC102517195
subclass of: SO_0000673
so part of: LOC102517195
location: complement(join(3164115..3165408,3165540..3165644,3166133..3166241))
location: region:3164115-3166241:-1
so has part: feature:3166133-3166241:-1:exon
so has part: feature:3165540-3165644:-1:exon
so has part: feature:3164115-3165408:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3166133-3166241:-1:exon

position:3166133:-1
position: 3166133
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3165540-3165644:-1:exon

position:3165540:-1
position: 3165540
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3165644:-1
position: 3165644
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3164115-3165408:-1:exon

position:3165408:-1
position: 3165408
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC116660813
type: Gene
subclass of: SO_0000704
RO_0002162: 419612
gene: LOC116660813
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 3170307..3186724
location: region:3170307-3186724:1
so has part: feature:3170307-3186724:1:exon
subclass of: SO_0000011

116660813
type: Gene
SIO_000068: ncbigene

position:3170307:1
position: 3170307
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3186724:1
position: 3186724
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3170307-3186724:1:exon

LOC116660813
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 419612
nc RNA class: lncRNA
gene: LOC116660813
product: uncharacterized LOC116660813, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XR_004316459.1
SIO_010081: LOC116660813
subclass of: SO_0000673
so part of: LOC116660813
location: join(3170307..3170823,3174029..3174101,3175699..3176046,3179337..3181341,3184618..3184727,3186061..3186724)
location: region:3170307-3186724:1
so has part: feature:3170307-3170823:1:exon
so has part: feature:3174029-3174101:1:exon
so has part: feature:3175699-3176046:1:exon
so has part: feature:3179337-3181341:1:exon
so has part: feature:3184618-3184727:1:exon
so has part: feature:3186061-3186724:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3170307-3170823:1:exon

position:3170823:1
position: 3170823
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3174029-3174101:1:exon

position:3174029:1
position: 3174029
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3174101:1
position: 3174101
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3175699-3176046:1:exon

position:3175699:1
position: 3175699
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3176046:1
position: 3176046
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3179337-3181341:1:exon

position:3179337:1
position: 3179337
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3181341:1
position: 3181341
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:3184618-3184727:1:exon

position:3184618:1
position: 3184618
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3184727:1
position: 3184727
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:3186061-3186724:1:exon

position:3186061:1
position: 3186061
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC116660813
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 419612
nc RNA class: lncRNA
gene: LOC116660813
product: uncharacterized LOC116660813, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XR_004316458.1
SIO_010081: LOC116660813
subclass of: SO_0000673
so part of: LOC116660813
location: join(3170307..3170823,3174029..3174101,3175699..3176046,3179337..3181341,3184618..3184689,3186061..3186724)
location: region:3170307-3186724:1
so has part: feature:3170307-3170823:1:exon
so has part: feature:3174029-3174101:1:exon
so has part: feature:3175699-3176046:1:exon
so has part: feature:3179337-3181341:1:exon
so has part: feature:3184618-3184689:1:exon
so has part: feature:3186061-3186724:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3170307-3170823:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3174029-3174101:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3175699-3176046:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3179337-3181341:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3184618-3184689:1:exon

position:3184689:1
position: 3184689
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:3186061-3186724:1:exon

LOC116660813
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 419612
nc RNA class: lncRNA
gene: LOC116660813
product: uncharacterized LOC116660813, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XR_004316457.1
SIO_010081: LOC116660813
subclass of: SO_0000673
so part of: LOC116660813
location: join(3170307..3170823,3174029..3174101,3175699..3176046,3179337..3181341,3186061..3186724)
location: region:3170307-3186724:1
so has part: feature:3170307-3170823:1:exon
so has part: feature:3174029-3174101:1:exon
so has part: feature:3175699-3176046:1:exon
so has part: feature:3179337-3181341:1:exon
so has part: feature:3186061-3186724:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3170307-3170823:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3174029-3174101:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3175699-3176046:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3179337-3181341:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3186061-3186724:1:exon

LOC116660810
type: Gene
subclass of: SO_0000704
RO_0002162: 419612
gene: LOC116660810
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(3185818..3222965)
location: region:3185818-3222965:-1
so has part: feature:3185818-3222965:-1:exon
subclass of: SO_0000011

116660810
type: Gene
SIO_000068: ncbigene

position:3185818:-1
position: 3185818
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3222965:-1
position: 3222965
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3185818-3222965:-1:exon

LOC116660810
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 419612
nc RNA class: lncRNA
gene: LOC116660810
product: uncharacterized LOC116660810, transcript variant X10
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XR_004316453.1
SIO_010081: LOC116660810
subclass of: SO_0000673
so part of: LOC116660810
location: complement(join(3185818..3185877,3191816..3191990,3210193..3212168,3213468..3215370))
location: region:3185818-3215370:-1
so has part: feature:3213468-3215370:-1:exon
so has part: feature:3210193-3212168:-1:exon
so has part: feature:3191816-3191990:-1:exon
so has part: feature:3185818-3185877:-1:exon

position:3215370:-1
position: 3215370
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3213468-3215370:-1:exon

position:3213468:-1
position: 3213468
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3210193-3212168:-1:exon

position:3210193:-1
position: 3210193
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3212168:-1
position: 3212168
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3191816-3191990:-1:exon

position:3191816:-1
position: 3191816
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3191990:-1
position: 3191990
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3185818-3185877:-1:exon

position:3185877:-1
position: 3185877
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC116660810
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 419612
nc RNA class: lncRNA
gene: LOC116660810
product: uncharacterized LOC116660810, transcript variant X11
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XR_004316454.1
SIO_010081: LOC116660810
subclass of: SO_0000673
so part of: LOC116660810
location: complement(join(3190848..3190866,3191816..3191990,3210193..3212168,3213468..3215370))
location: region:3190848-3215370:-1
so has part: feature:3213468-3215370:-1:exon
so has part: feature:3210193-3212168:-1:exon
so has part: feature:3191816-3191990:-1:exon
so has part: feature:3190848-3190866:-1:exon

position:3190848:-1
position: 3190848
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3213468-3215370:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3210193-3212168:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3191816-3191990:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3190848-3190866:-1:exon

position:3190866:-1
position: 3190866
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC116660810
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 419612
nc RNA class: lncRNA
gene: LOC116660810
product: uncharacterized LOC116660810, transcript variant X9
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XR_004316452.1
SIO_010081: LOC116660810
subclass of: SO_0000673
so part of: LOC116660810
location: complement(join(3191436..3191990,3210635..3212168,3213468..3215370))
location: region:3191436-3215370:-1
so has part: feature:3213468-3215370:-1:exon
so has part: feature:3210635-3212168:-1:exon
so has part: feature:3191436-3191990:-1:exon

position:3191436:-1
position: 3191436
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3213468-3215370:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3210635-3212168:-1:exon

position:3210635:-1
position: 3210635
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3191436-3191990:-1:exon

LOC116660810
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 419612
nc RNA class: lncRNA
gene: LOC116660810
product: uncharacterized LOC116660810, transcript variant X8
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XR_004316451.1
SIO_010081: LOC116660810
subclass of: SO_0000673
so part of: LOC116660810
location: complement(join(3191436..3191990,3210193..3210251,3210635..3212168,3213468..3215370))
location: region:3191436-3215370:-1
so has part: feature:3213468-3215370:-1:exon
so has part: feature:3210635-3212168:-1:exon
so has part: feature:3210193-3210251:-1:exon
so has part: feature:3191436-3191990:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3213468-3215370:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3210635-3212168:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3210193-3210251:-1:exon

position:3210251:-1
position: 3210251
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3191436-3191990:-1:exon

LOC116660810
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 419612
nc RNA class: lncRNA
gene: LOC116660810
product: uncharacterized LOC116660810, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XR_004316445.1
SIO_010081: LOC116660810
subclass of: SO_0000673
so part of: LOC116660810
location: complement(join(3191436..3191990,3210193..3212168,3213468..3215370))
location: region:3191436-3215370:-1
so has part: feature:3213468-3215370:-1:exon
so has part: feature:3210193-3212168:-1:exon
so has part: feature:3191436-3191990:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3213468-3215370:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3210193-3212168:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3191436-3191990:-1:exon

LOC116660810
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 419612
nc RNA class: lncRNA
gene: LOC116660810
product: uncharacterized LOC116660810, transcript variant X7
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XR_004316450.1
SIO_010081: LOC116660810
subclass of: SO_0000673
so part of: LOC116660810
location: complement(join(3208290..3209435,3210193..3212168,3213468..3215370))
location: region:3208290-3215370:-1
so has part: feature:3213468-3215370:-1:exon
so has part: feature:3210193-3212168:-1:exon
so has part: feature:3208290-3209435:-1:exon

position:3208290:-1
position: 3208290
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3213468-3215370:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3210193-3212168:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3208290-3209435:-1:exon

position:3209435:-1
position: 3209435
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC116660810
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 419612
nc RNA class: lncRNA
gene: LOC116660810
product: uncharacterized LOC116660810, transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XR_004316449.1
SIO_010081: LOC116660810
subclass of: SO_0000673
so part of: LOC116660810
location: complement(join(3208710..3210719,3210801..3212168,3213468..3215370))
location: region:3208710-3215370:-1
so has part: feature:3213468-3215370:-1:exon
so has part: feature:3210801-3212168:-1:exon
so has part: feature:3208710-3210719:-1:exon

position:3208710:-1
position: 3208710
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3213468-3215370:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3210801-3212168:-1:exon

position:3210801:-1
position: 3210801
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3208710-3210719:-1:exon

position:3210719:-1
position: 3210719
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC116660810
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 419612
nc RNA class: lncRNA
gene: LOC116660810
product: uncharacterized LOC116660810, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 23 samples with support for all annotated introns
transcript id: XR_004316447.1
SIO_010081: LOC116660810
subclass of: SO_0000673
so part of: LOC116660810
location: complement(join(3208711..3212168,3213468..3213529,3221511..3222965))
location: region:3208711-3222965:-1
so has part: feature:3221511-3222965:-1:exon
so has part: feature:3213468-3213529:-1:exon
so has part: feature:3208711-3212168:-1:exon

position:3208711:-1
position: 3208711
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3221511-3222965:-1:exon

position:3221511:-1
position: 3221511
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3213468-3213529:-1:exon

position:3213529:-1
position: 3213529
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3208711-3212168:-1:exon

LOC116660810
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 419612
nc RNA class: lncRNA
gene: LOC116660810
product: uncharacterized LOC116660810, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
transcript id: XR_004316446.1
SIO_010081: LOC116660810
subclass of: SO_0000673
so part of: LOC116660810
location: complement(join(3208711..3212168,3213468..3213695,3221511..3222965))
location: region:3208711-3222965:-1
so has part: feature:3221511-3222965:-1:exon
so has part: feature:3213468-3213695:-1:exon
so has part: feature:3208711-3212168:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3221511-3222965:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3213468-3213695:-1:exon

position:3213695:-1
position: 3213695
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3208711-3212168:-1:exon

LOC116660810
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 419612
nc RNA class: lncRNA
gene: LOC116660810
product: uncharacterized LOC116660810, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 16 samples with support for all annotated introns
transcript id: XR_004316448.1
SIO_010081: LOC116660810
subclass of: SO_0000673
so part of: LOC116660810
location: complement(join(3208711..3212168,3213468..3213529,3213615..3215370))
location: region:3208711-3215370:-1
so has part: feature:3213615-3215370:-1:exon
so has part: feature:3213468-3213529:-1:exon
so has part: feature:3208711-3212168:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3213615-3215370:-1:exon

position:3213615:-1
position: 3213615
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3213468-3213529:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3208711-3212168:-1:exon

LOC116660810
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 419612
nc RNA class: lncRNA
gene: LOC116660810
product: uncharacterized LOC116660810, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 23 samples with support for all annotated introns
transcript id: XR_004316444.1
SIO_010081: LOC116660810
subclass of: SO_0000673
so part of: LOC116660810
location: complement(join(3208711..3212168,3213468..3215370))
location: region:3208711-3215370:-1
so has part: feature:3213468-3215370:-1:exon
so has part: feature:3208711-3212168:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3213468-3215370:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3208711-3212168:-1:exon

LOC102524048
type: Gene
subclass of: SO_0000704
RO_0002162: 419612
gene: LOC102524048
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: complement(3228674..3230545)
location: region:3228674-3230545:-1
so has part: feature:3228674-3230545:-1:exon

102524048
type: Gene
SIO_000068: ncbigene

position:3228674:-1
position: 3228674
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3230545:-1
position: 3230545
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3228674-3230545:-1:exon

LOC102524048
type: Exon
subclass of: SO_0000147
RO_0002162: 419612
gene: LOC102524048
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 91% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC102524048
subclass of: SO_0000673
so part of: LOC102524048
location: complement(3228674..3230545)
location: region:3228674-3230545:-1
so has part: feature:3228674-3230545:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3228674-3230545:-1:exon

LOC116660807
type: Gene
subclass of: SO_0000704
RO_0002162: 419612
gene: LOC116660807
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: complement(3231886..3232851)
location: region:3231886-3232851:-1
so has part: feature:3231886-3232851:-1:exon

116660807
type: Gene
SIO_000068: ncbigene

position:3231886:-1
position: 3231886
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3232851:-1
position: 3232851
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3231886-3232851:-1:exon

LOC116660807
type: Exon
subclass of: SO_0000147
RO_0002162: 419612
gene: LOC116660807
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 95% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC116660807
subclass of: SO_0000673
so part of: LOC116660807
location: complement(3231886..3232851)
location: region:3231886-3232851:-1
so has part: feature:3231886-3232851:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3231886-3232851:-1:exon

LOC102513960
type: Gene
subclass of: SO_0000704
RO_0002162: 419612
gene: LOC102513960
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 3232949..3276375
location: region:3232949-3276375:1
so has part: feature:3232949-3276375:1:exon
subclass of: SO_0000010

102513960
type: Gene
SIO_000068: ncbigene

position:3232949:1
position: 3232949
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3276375:1
position: 3276375
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3232949-3276375:1:exon

LOC102513960
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 419612
gene: LOC102513960
product: rho GTPase-activating protein 20-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_032471098.1
SIO_010081: LOC102513960
subclass of: SO_0000673
so part of: LOC102513960
location: join(3232949..3233173,3233281..3233419,3240447..3240596,3247573..3247614,3248528..3248612,3253781..3253847,3256226..3256414,3262764..3262942,3264323..3264484,3267802..3267911,3270545..3270734,3271900..3272014,3273165..3276375)
location: region:3232949-3276375:1
so has part: feature:3232949-3233173:1:exon
so has part: feature:3233281-3233419:1:exon
so has part: feature:3240447-3240596:1:exon
so has part: feature:3247573-3247614:1:exon
so has part: feature:3248528-3248612:1:exon
so has part: feature:3253781-3253847:1:exon
so has part: feature:3256226-3256414:1:exon
so has part: feature:3262764-3262942:1:exon
so has part: feature:3264323-3264484:1:exon
so has part: feature:3267802-3267911:1:exon
so has part: feature:3270545-3270734:1:exon
so has part: feature:3271900-3272014:1:exon
so has part: feature:3273165-3276375:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3232949-3233173:1:exon

position:3233173:1
position: 3233173
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3233281-3233419:1:exon

position:3233281:1
position: 3233281
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3233419:1
position: 3233419
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3240447-3240596:1:exon

position:3240447:1
position: 3240447
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3240596:1
position: 3240596
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3247573-3247614:1:exon

position:3247573:1
position: 3247573
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3247614:1
position: 3247614
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:3248528-3248612:1:exon

position:3248528:1
position: 3248528
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3248612:1
position: 3248612
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:3253781-3253847:1:exon

position:3253781:1
position: 3253781
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3253847:1
position: 3253847
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:3256226-3256414:1:exon

position:3256226:1
position: 3256226
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3256414:1
position: 3256414
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:3262764-3262942:1:exon

position:3262764:1
position: 3262764
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3262942:1
position: 3262942
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:3264323-3264484:1:exon

position:3264323:1
position: 3264323
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3264484:1
position: 3264484
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:3267802-3267911:1:exon

position:3267802:1
position: 3267802
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3267911:1
position: 3267911
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:3270545-3270734:1:exon

position:3270545:1
position: 3270545
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3270734:1
position: 3270734
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:3271900-3272014:1:exon

position:3271900:1
position: 3271900
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3272014:1
position: 3272014
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:3273165-3276375:1:exon

position:3273165:1
position: 3273165
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC102513960
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 419612
gene: LOC102513960
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: substituted 2 bases at 2 genomic stop codons; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
transl except: (pos:3267811..3267813,aa:OTHER)
transl except: (pos:3273944..3273946,aa:OTHER)
product: LOW QUALITY PROTEIN: rho GTPase-activating protein 20-like
translation: MWTASCVDEVGEGSTSAVGSFVLGWPTVSLAATFSSPEQKGKWLSLLQRYINLEKEKDYPKSIPLLVVTKDVGNCTCGSEKENKCWVNSGKEEAPYPLIGHEFPYRITMSHLQDTALLMQGLKDSPTPSNLQEPFLMEQLPKEKQCQFILKPSRLAVAQQLGDSGQKMFKRRSSIINWAFWWGSSTHLDNQPMSPTSLKPGQLFGVSLPEICENNNLPKPLLDMLFFLNQKGPLTKGIFRQSANMKSCRELREKLNSGVEVQLDCESAFVIASVLKDFLXHIPGSVFSSDLYDHWVCVMDEGNNEEKINAVQRLLDQLPRANVILLKHLFGLLHETEKHASSSQMNAFNLAVCITPSVLWPPASSSPELESEFTRKVSLLIQFLIENCCRIFGEEITSLLEEVSVTCDTKENASDISCFQLNDSMENELNEEVNAPCSDLVKKLSPGSRSMDSMLTLIDYDLEQPEAEGVLTLSNFDLDGPKGEDIQVEQPSEPVPVAAAAVYRKASLQDQTSAPSGTSTPGHLSAATEDAPKTPRQQRRCSEPSIGYLGSKLSFLRAFYQKRICKSSCDAILLKKDENHLSQNPPLQEEGKTGFKMSLVTCTDVKKNATDKNDKKSLCDSKGNRVKLFPKSKPVTISYSCLSSHDRPRNQPFTADMAGYSPPCTAEPLKGSRRXQCCSEPSTDDRRCKLTYLRGLYSKKQQHNASCDTSLLHGEEDNLKRHKSLQMEGQKLINQSLVMGIEVGKSGATNQNTEKVFPPRLNICLRSSYSSLSSPDTSPSGSLVSSQDSAFSQISEQSVFTPTETSSPVDCTFQVRGKQEELSSDFSSSSLISGIPGPLSGQSSSHLAHTKKDSLEGHSQMHSITLHPSTRLRNGIASLKNWSLKKKSRAPRPEDNKAGSLKGPMEPPPHAPGIPEASTLQERQTDVPQRAAEGLGAVQIAQCCSSYPSQDSEKDNSSPSSLAEDGLELGMKYPEEGENDGQCFPGTLPLEGSSPSSLTMDDVSSPDSEPTVVSDAEDTHVTKDI
SIO_010081: LOC102513960
subclass of: SO_0000673
so part of: LOC102513960
location: join(3240493..3240596,3247573..3247614,3248528..3248612,3253781..3253847,3256226..3256414,3262764..3262942,3264323..3264484,3267802..3267911,3270545..3270734,3271900..3272014,3273165..3274999)
location: region:3240493-3274999:1
so has part: feature:3240493-3240596:1:exon
so has part: feature:3247573-3247614:1:exon
so has part: feature:3248528-3248612:1:exon
so has part: feature:3253781-3253847:1:exon
so has part: feature:3256226-3256414:1:exon
so has part: feature:3262764-3262942:1:exon
so has part: feature:3264323-3264484:1:exon
so has part: feature:3267802-3267911:1:exon
so has part: feature:3270545-3270734:1:exon
so has part: feature:3271900-3272014:1:exon
so has part: feature:3273165-3274999:1:exon

XP_032326989.1
type: Protein
SIO_000068: ncbiprotein

position:3240493:1
position: 3240493
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3274999:1
position: 3274999
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3240493-3240596:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3247573-3247614:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3248528-3248612:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3253781-3253847:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3256226-3256414:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3262764-3262942:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3264323-3264484:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3267802-3267911:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3270545-3270734:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3271900-3272014:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3273165-3274999:1:exon

LOC116660805
type: Gene
subclass of: SO_0000704
RO_0002162: 419612
gene: LOC116660805
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: 3240514..3246426
location: region:3240514-3246426:1
so has part: feature:3240514-3246426:1:exon

116660805
type: Gene
SIO_000068: ncbigene

position:3240514:1
position: 3240514
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3246426:1
position: 3246426
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3240514-3246426:1:exon

LOC116660805
type: Exon
subclass of: SO_0000147
RO_0002162: 419612
gene: LOC116660805
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 12 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
pseudo: true
SIO_010081: LOC116660805
subclass of: SO_0000673
so part of: LOC116660805
location: 3240514..3240596
location: region:3240514-3240596:1
so has part: feature:3240514-3240596:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3240514-3240596:1:exon

LOC116660805
type: Exon
subclass of: SO_0000147
RO_0002162: 419612
gene: LOC116660805
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 12 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
pseudo: true
SIO_010081: LOC116660805
subclass of: SO_0000673
so part of: LOC116660805
location: 3243638..3246426
location: region:3243638-3246426:1
so has part: feature:3243638-3246426:1:exon

position:3243638:1
position: 3243638
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3243638-3246426:1:exon

LOC116660818
type: Gene
subclass of: SO_0000704
RO_0002162: 419612
gene: LOC116660818
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 3297623..3311462
location: region:3297623-3311462:1
so has part: feature:3297623-3311462:1:exon
subclass of: SO_0000011

116660818
type: Gene
SIO_000068: ncbigene

position:3297623:1
position: 3297623
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3311462:1
position: 3311462
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3297623-3311462:1:exon

LOC116660818
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 419612
nc RNA class: lncRNA
gene: LOC116660818
product: uncharacterized LOC116660818
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XR_004316466.1
SIO_010081: LOC116660818
subclass of: SO_0000673
so part of: LOC116660818
location: join(3297623..3298522,3300280..3300281,3311452..3311462)
location: region:3297623-3311462:1
so has part: feature:3297623-3298522:1:exon
so has part: feature:3300280-3300281:1:exon
so has part: feature:3311452-3311462:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3297623-3298522:1:exon

position:3298522:1
position: 3298522
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3300280-3300281:1:exon

position:3300280:1
position: 3300280
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3300281:1
position: 3300281
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3311452-3311462:1:exon

position:3311452:1
position: 3311452
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC116660815
type: Gene
subclass of: SO_0000704
RO_0002162: 419612
gene: LOC116660815
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(3356769..3365949)
location: region:3356769-3365949:-1
so has part: feature:3356769-3365949:-1:exon
subclass of: SO_0000011

116660815
type: Gene
SIO_000068: ncbigene

position:3356769:-1
position: 3356769
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3365949:-1
position: 3365949
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3356769-3365949:-1:exon

LOC116660815
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 419612
nc RNA class: lncRNA
gene: LOC116660815
product: uncharacterized LOC116660815
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
transcript id: XR_004316462.1
SIO_010081: LOC116660815
subclass of: SO_0000673
so part of: LOC116660815
location: complement(join(3356769..3357534,3360071..3365949))
location: region:3356769-3365949:-1
so has part: feature:3360071-3365949:-1:exon
so has part: feature:3356769-3357534:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3360071-3365949:-1:exon

position:3360071:-1
position: 3360071
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3356769-3357534:-1:exon

position:3357534:-1
position: 3357534
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC116660728
type: Gene
subclass of: SO_0000704
RO_0002162: 419612
gene: LOC116660728
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: <3378447..3380739
location: region:3378447-3380739:1
so has part: feature:3378447-3380739:1:exon
subclass of: SO_0000010

116660728
type: Gene
SIO_000068: ncbigene

position:3378447:1
position: 3378447
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

position:3380739:1
position: 3380739
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3378447-3380739:1:exon

LOC116660728
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 419612
gene: LOC116660728
product: 60S acidic ribosomal protein P1-like
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 2 bases in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_032470830.1
SIO_010081: LOC116660728
subclass of: SO_0000673
so part of: LOC116660728
location: <3378447..3380739
location: region:3378447-3380739:1
so has part: feature:3378447-3380739:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3378447-3380739:1:exon

LOC116660728
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 419612
gene: LOC116660728
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 2 bases in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: 60S acidic ribosomal protein P1-like
translation: KNTGYLGIFKTQLIPTSTQQRTFFPRLLPRCSDLPRELRRRWGEAPTSPGAQHRARPAAPARSSPRPASRSQLACICSALVLRDNEVTVTEDKINALIKAAGVEPFWRGLFAKALDNVITGGLICNVGATAPAPHPPLPPTLDPPPPPPASPAAGAAPAGAPPPPPXSAPAEEEKAEAKKGGSGSEEFDDYMGFGLFD
SIO_010081: LOC116660728
subclass of: SO_0000673
so part of: LOC116660728
location: <3378447..3379041
location: region:3378447-3379041:1
so has part: feature:3378447-3379041:1:exon

XP_032326721.1
type: Protein
SIO_000068: ncbiprotein

position:3379041:1
position: 3379041
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3378447-3379041:1:exon

LOC102504147
type: Gene
subclass of: SO_0000704
RO_0002162: 419612
gene: LOC102504147
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 3381317..3395869
location: region:3381317-3395869:1
so has part: feature:3381317-3395869:1:exon
subclass of: SO_0000010

102504147
type: Gene
SIO_000068: ncbigene

position:3381317:1
position: 3381317
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3395869:1
position: 3395869
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3381317-3395869:1:exon

LOC102504147
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 419612
gene: LOC102504147
product: uncharacterized LOC102504147
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 96% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_032470831.1
SIO_010081: LOC102504147
subclass of: SO_0000673
so part of: LOC102504147
location: join(3381317..3381499,3392528..3392637,3394523..3394617,3395712..3395869)
location: region:3381317-3395869:1
so has part: feature:3381317-3381499:1:exon
so has part: feature:3392528-3392637:1:exon
so has part: feature:3394523-3394617:1:exon
so has part: feature:3395712-3395869:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3381317-3381499:1:exon

position:3381499:1
position: 3381499
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3392528-3392637:1:exon

position:3392528:1
position: 3392528
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3392637:1
position: 3392637
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3394523-3394617:1:exon

position:3394523:1
position: 3394523
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3394617:1
position: 3394617
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3395712-3395869:1:exon

position:3395712:1
position: 3395712
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC102504147
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 419612
gene: LOC102504147
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC102504147
translation: MEPRRQAVVTTAAPENAHLSWRQEAGLRSAQHPKRGGACDNQCGSSNINITLSETSQDFFQNIEGSIFTASLHNKWLSVLDERNAEEKITATRRFLWYSSSLRTASSSGEKTPLPSGKHAATPDKVTTGQPLESTRMTVAVIFKSPQGQYEAKCPTTTGLHTCLSTILEVPEEQKWP
SIO_010081: LOC102504147
subclass of: SO_0000673
so part of: LOC102504147
location: join(3381329..3381499,3392528..3392637,3394523..3394617,3395712..3395869)
location: region:3381329-3395869:1
so has part: feature:3381329-3381499:1:exon
so has part: feature:3392528-3392637:1:exon
so has part: feature:3394523-3394617:1:exon
so has part: feature:3395712-3395869:1:exon

XP_032326722.1
type: Protein
SIO_000068: ncbiprotein

position:3381329:1
position: 3381329
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3381329-3381499:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3392528-3392637:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3394523-3394617:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3395712-3395869:1:exon

LOC102513529
type: Gene
subclass of: SO_0000704
RO_0002162: 419612
gene: LOC102513529
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: complement(3393902..3421551)
location: region:3393902-3421551:-1
so has part: feature:3393902-3421551:-1:exon

102513529
type: Gene
SIO_000068: ncbigene

position:3393902:-1
position: 3393902
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3421551:-1
position: 3421551
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3393902-3421551:-1:exon

LOC102513529
type: Exon
subclass of: SO_0000147
RO_0002162: 419612
gene: LOC102513529
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 97% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC102513529
subclass of: SO_0000673
so part of: LOC102513529
location: complement(3393902..3395200)
location: region:3393902-3395200:-1
so has part: feature:3393902-3395200:-1:exon

position:3395200:-1
position: 3395200
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3393902-3395200:-1:exon

LOC102513529
type: Exon
subclass of: SO_0000147
RO_0002162: 419612
gene: LOC102513529
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 97% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC102513529
subclass of: SO_0000673
so part of: LOC102513529
location: complement(3396027..3396230)
location: region:3396027-3396230:-1
so has part: feature:3396027-3396230:-1:exon

position:3396027:-1
position: 3396027
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3396230:-1
position: 3396230
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3396027-3396230:-1:exon

LOC102513529
type: Exon
subclass of: SO_0000147
RO_0002162: 419612
gene: LOC102513529
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 97% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC102513529
subclass of: SO_0000673
so part of: LOC102513529
location: complement(3419467..3420073)
location: region:3419467-3420073:-1
so has part: feature:3419467-3420073:-1:exon

position:3419467:-1
position: 3419467
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3420073:-1
position: 3420073
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3419467-3420073:-1:exon

LOC102513529
type: Exon
subclass of: SO_0000147
RO_0002162: 419612
gene: LOC102513529
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 97% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC102513529
subclass of: SO_0000673
so part of: LOC102513529
location: complement(3421507..3421551)
location: region:3421507-3421551:-1
so has part: feature:3421507-3421551:-1:exon

position:3421507:-1
position: 3421507
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3421507-3421551:-1:exon

LOC102504075
type: Gene
subclass of: SO_0000704
RO_0002162: 419612
gene: LOC102504075
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: complement(3439825..3441141)
location: region:3439825-3441141:-1
so has part: feature:3439825-3441141:-1:exon

102504075
type: Gene
SIO_000068: ncbigene

position:3439825:-1
position: 3439825
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3441141:-1
position: 3441141
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3439825-3441141:-1:exon

LOC102504075
type: Exon
subclass of: SO_0000147
RO_0002162: 419612
gene: LOC102504075
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 47% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC102504075
subclass of: SO_0000673
so part of: LOC102504075
location: complement(3439825..3441141)
location: region:3439825-3441141:-1
so has part: feature:3439825-3441141:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3439825-3441141:-1:exon

LOC116660814
type: Gene
subclass of: SO_0000704
RO_0002162: 419612
gene: LOC116660814
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(3469776..3479488)
location: region:3469776-3479488:-1
so has part: feature:3469776-3479488:-1:exon
subclass of: SO_0000011

116660814
type: Gene
SIO_000068: ncbigene

position:3469776:-1
position: 3469776
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3479488:-1
position: 3479488
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3469776-3479488:-1:exon

LOC116660814
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 419612
nc RNA class: lncRNA
gene: LOC116660814
product: uncharacterized LOC116660814
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 18 samples with support for all annotated introns
transcript id: XR_004316460.1
SIO_010081: LOC116660814
subclass of: SO_0000673
so part of: LOC116660814
location: complement(join(3469776..3469789,3471856..3471861,3478680..3479488))
location: region:3469776-3479488:-1
so has part: feature:3478680-3479488:-1:exon
so has part: feature:3471856-3471861:-1:exon
so has part: feature:3469776-3469789:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3478680-3479488:-1:exon

position:3478680:-1
position: 3478680
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3471856-3471861:-1:exon

position:3471856:-1
position: 3471856
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3471861:-1
position: 3471861
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3469776-3469789:-1:exon

position:3469789:-1
position: 3469789
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC116660812
type: Gene
subclass of: SO_0000704
RO_0002162: 419612
gene: LOC116660812
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 3491754..3495850
location: region:3491754-3495850:1
so has part: feature:3491754-3495850:1:exon
subclass of: SO_0000011

116660812
type: Gene
SIO_000068: ncbigene

position:3491754:1
position: 3491754
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3495850:1
position: 3495850
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3491754-3495850:1:exon

LOC116660812
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 419612
nc RNA class: lncRNA
gene: LOC116660812
product: uncharacterized LOC116660812
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 11 samples with support for all annotated introns
transcript id: XR_004316456.1
SIO_010081: LOC116660812
subclass of: SO_0000673
so part of: LOC116660812
location: join(3491754..3493642,3494455..3495850)
location: region:3491754-3495850:1
so has part: feature:3491754-3493642:1:exon
so has part: feature:3494455-3495850:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3491754-3493642:1:exon

position:3493642:1
position: 3493642
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3494455-3495850:1:exon

position:3494455:1
position: 3494455
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

SPOCK3
type: Gene
subclass of: SO_0000704
RO_0002162: 419612
gene: SPOCK3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(3506431..3637798)
location: region:3506431-3637798:-1
so has part: feature:3506431-3637798:-1:exon
subclass of: SO_0000010

102522906
type: Gene
SIO_000068: ncbigene

position:3506431:-1
position: 3506431
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3637798:-1
position: 3637798
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3506431-3637798:-1:exon

SPOCK3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 419612
gene: SPOCK3
product: SPARC (osteonectin), cwcv and kazal like domains proteoglycan 3
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 Proteins, and 95% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_032470773.1
SIO_010081: SPOCK3
subclass of: SO_0000673
so part of: SPOCK3
location: complement(join(3506431..3508874,3510871..3510991,3513750..3513812,3518531..3518752,3525813..3525932,3556662..3556776,3567145..3567244,3586775..3586889,3607224..3607269,3607375..3607383,3637300..3637470,3637631..3637798))
location: region:3506431-3637798:-1
so has part: feature:3637631-3637798:-1:exon
so has part: feature:3637300-3637470:-1:exon
so has part: feature:3607375-3607383:-1:exon
so has part: feature:3607224-3607269:-1:exon
so has part: feature:3586775-3586889:-1:exon
so has part: feature:3567145-3567244:-1:exon
so has part: feature:3556662-3556776:-1:exon
so has part: feature:3525813-3525932:-1:exon
so has part: feature:3518531-3518752:-1:exon
so has part: feature:3513750-3513812:-1:exon
so has part: feature:3510871-3510991:-1:exon
so has part: feature:3506431-3508874:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3637631-3637798:-1:exon

position:3637631:-1
position: 3637631
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3637300-3637470:-1:exon

position:3637300:-1
position: 3637300
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3637470:-1
position: 3637470
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3607375-3607383:-1:exon

position:3607375:-1
position: 3607375
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3607383:-1
position: 3607383
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3607224-3607269:-1:exon

position:3607224:-1
position: 3607224
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3607269:-1
position: 3607269
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:3586775-3586889:-1:exon

position:3586775:-1
position: 3586775
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3586889:-1
position: 3586889
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:3567145-3567244:-1:exon

position:3567145:-1
position: 3567145
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3567244:-1
position: 3567244
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:3556662-3556776:-1:exon

position:3556662:-1
position: 3556662
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3556776:-1
position: 3556776
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:3525813-3525932:-1:exon

position:3525813:-1
position: 3525813
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3525932:-1
position: 3525932
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:3518531-3518752:-1:exon

position:3518531:-1
position: 3518531
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3518752:-1
position: 3518752
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:3513750-3513812:-1:exon

position:3513750:-1
position: 3513750
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3513812:-1
position: 3513812
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:3510871-3510991:-1:exon

position:3510871:-1
position: 3510871
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3510991:-1
position: 3510991
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:3506431-3508874:-1:exon

position:3508874:-1
position: 3508874
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

SPOCK3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 419612
gene: SPOCK3
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: testican-3
translation: MLRAPAVLCVCAAAWCAQALAAAVGRPASGNFLDDKQWLSTVSQYDREAGQWNRFRDEVEDDYFRTWSPGKTFEPALDPAEDPCLKVKCSHHEVCTVRGPHAAVCVGQRRLPHRTKDAAVRHKWCKQCPGVSTSPVCGSDGRTYSSQCKLEYQACVLGKQISVRCEGHCPCPSGTTTSTSRNAKRACSALELREVASRLRDWFKALHESGGQNTDSRASLRLERSRFDTSILPICKDSLGWMFNRLDTNYDLLLDPSELGSMYLDKNEPCAEAFFNSCDTYRDRCISNNEWCACFQRQQAPPCQTERSSLRKRLEVKKFLGQYIPQCDEDGYYKPRQCRGALGLCWCVDRYGNEVAGADCAVDFETSGDFASGDFREWAGDMGEDGVTRGEDEIGDDEEEEGDDDDGGDQDGYV
SIO_010081: SPOCK3
subclass of: SO_0000673
so part of: SPOCK3
location: complement(join(3508711..3508874,3510871..3510991,3513750..3513812,3518531..3518752,3525813..3525932,3556662..3556776,3567145..3567244,3586775..3586889,3607224..3607269,3607375..3607383,3637300..3637470))
location: region:3508711-3637470:-1
so has part: feature:3637300-3637470:-1:exon
so has part: feature:3607375-3607383:-1:exon
so has part: feature:3607224-3607269:-1:exon
so has part: feature:3586775-3586889:-1:exon
so has part: feature:3567145-3567244:-1:exon
so has part: feature:3556662-3556776:-1:exon
so has part: feature:3525813-3525932:-1:exon
so has part: feature:3518531-3518752:-1:exon
so has part: feature:3513750-3513812:-1:exon
so has part: feature:3510871-3510991:-1:exon
so has part: feature:3508711-3508874:-1:exon

XP_032326664.1
type: Protein
SIO_000068: ncbiprotein

position:3508711:-1
position: 3508711
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3637300-3637470:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3607375-3607383:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3607224-3607269:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3586775-3586889:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3567145-3567244:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3556662-3556776:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3525813-3525932:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3518531-3518752:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3513750-3513812:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3510871-3510991:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3508711-3508874:-1:exon

LOC102522652
type: Gene
subclass of: SO_0000704
RO_0002162: 419612
gene: LOC102522652
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: complement(3654914..3656052)
location: region:3654914-3656052:-1
so has part: feature:3654914-3656052:-1:exon

102522652
type: Gene
SIO_000068: ncbigene

position:3654914:-1
position: 3654914
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3656052:-1
position: 3656052
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3654914-3656052:-1:exon

LOC102522652
type: Exon
subclass of: SO_0000147
RO_0002162: 419612
gene: LOC102522652
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 64% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC102522652
subclass of: SO_0000673
so part of: LOC102522652
location: complement(3654914..3656052)
location: region:3654914-3656052:-1
so has part: feature:3654914-3656052:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3654914-3656052:-1:exon

LOC102523159
type: Gene
subclass of: SO_0000704
RO_0002162: 419612
gene: LOC102523159
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 3687611..3688563
location: region:3687611-3688563:1
so has part: feature:3687611-3688563:1:exon
subclass of: SO_0000010

102523159
type: Gene
SIO_000068: ncbigene

position:3687611:1
position: 3687611
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3688563:1
position: 3688563
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3687611-3688563:1:exon

LOC102523159
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 419612
gene: LOC102523159
product: vacuolar protein sorting-associated protein 26A-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_032470905.1
SIO_010081: LOC102523159
subclass of: SO_0000673
so part of: LOC102523159
location: 3687611..3688563
location: region:3687611-3688563:1
so has part: feature:3687611-3688563:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3687611-3688563:1:exon

LOC102523159
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 419612
gene: LOC102523159
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: vacuolar protein sorting-associated protein 26A-like
translation: MQVEKPYESFIGANVHLRYFLKVTIVRRLTDLVKEYDLIVHQLATYPDVNNSVKMEVGIEDCLHIEFEYNTSKYHLKDVIVGKIYFLLVRIKIQHMELQLIKKEITGIGPSTTTEIETIAEYEIMDGAPVEGELISIGLFLAGYDPTPTMRDVNKKFSVRYFLNLVLVDEEDRRYFKQQEIILWRKGS
SIO_010081: LOC102523159
subclass of: SO_0000673
so part of: LOC102523159
location: 3687908..3688474
location: region:3687908-3688474:1
so has part: feature:3687908-3688474:1:exon

XP_032326796.1
type: Protein
SIO_000068: ncbiprotein

position:3687908:1
position: 3687908
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3688474:1
position: 3688474
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3687908-3688474:1:exon

ANXA10
type: Gene
subclass of: SO_0000704
RO_0002162: 419612
gene: ANXA10
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 3713376..3769324
location: region:3713376-3769324:1
so has part: feature:3713376-3769324:1:exon
subclass of: SO_0000010

102523408
type: Gene
SIO_000068: ncbigene

position:3713376:1
position: 3713376
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3769324:1
position: 3769324
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3713376-3769324:1:exon

ANXA10
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 419612
gene: ANXA10
product: annexin A10, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_032470902.1
SIO_010081: ANXA10
subclass of: SO_0000673
so part of: ANXA10
location: join(3713376..3713465,3718187..3718273,3742861..3742955,3752958..3753071,3754447..3754537,3755671..3755750,3761844..3761897,3761983..3762076,3762732..3762827,3764678..3764736,3767017..3767139,3769084..3769324)
location: region:3713376-3769324:1
so has part: feature:3713376-3713465:1:exon
so has part: feature:3718187-3718273:1:exon
so has part: feature:3742861-3742955:1:exon
so has part: feature:3752958-3753071:1:exon
so has part: feature:3754447-3754537:1:exon
so has part: feature:3755671-3755750:1:exon
so has part: feature:3761844-3761897:1:exon
so has part: feature:3761983-3762076:1:exon
so has part: feature:3762732-3762827:1:exon
so has part: feature:3764678-3764736:1:exon
so has part: feature:3767017-3767139:1:exon
so has part: feature:3769084-3769324:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3713376-3713465:1:exon

position:3713465:1
position: 3713465
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3718187-3718273:1:exon

position:3718187:1
position: 3718187
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3718273:1
position: 3718273
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3742861-3742955:1:exon

position:3742861:1
position: 3742861
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3742955:1
position: 3742955
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3752958-3753071:1:exon

position:3752958:1
position: 3752958
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3753071:1
position: 3753071
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:3754447-3754537:1:exon

position:3754447:1
position: 3754447
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3754537:1
position: 3754537
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:3755671-3755750:1:exon

position:3755671:1
position: 3755671
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3755750:1
position: 3755750
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:3761844-3761897:1:exon

position:3761844:1
position: 3761844
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3761897:1
position: 3761897
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:3761983-3762076:1:exon

position:3761983:1
position: 3761983
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3762076:1
position: 3762076
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:3762732-3762827:1:exon

position:3762732:1
position: 3762732
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3762827:1
position: 3762827
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:3764678-3764736:1:exon

position:3764678:1
position: 3764678
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3764736:1
position: 3764736
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:3767017-3767139:1:exon

position:3767017:1
position: 3767017
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3767139:1
position: 3767139
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:3769084-3769324:1:exon

position:3769084:1
position: 3769084
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

ANXA10
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 419612
gene: ANXA10
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: annexin A10 isoform X1
translation: METLKQVCPTDHLLRPLCSEVNNYHQNVLWRLYCDKDLLLDILTQRSGAQRQVIAEAYQGMCGRDLLGDLKEKLSGHFKDVMVGLMYPPPSYDAHELWHAMKGAGTEENCLIDILASRTNGEIFQMREAYYMQYSSDLQEDIYSETSGHFRDTLVNLVQGTREEGYADPAVAAQDAVVLWEACQQRTGEHKTLLQVILCTKSYQQLWLVFQEFQNISGQDIVDAINECYDGYFQELLVAIVLCVRDKPAYFAYRLYSAIHDFGFHNKTVIRIIIARSEIDLMTIRKRYKERYGKSLFHDIKNFASGHYEKALLALCAGDAEDY
SIO_010081: ANXA10
subclass of: SO_0000673
so part of: ANXA10
location: join(3713456..3713465,3718187..3718273,3742861..3742955,3752958..3753071,3754447..3754537,3755671..3755750,3761844..3761897,3761983..3762076,3762732..3762827,3764678..3764736,3767017..3767139,3769084..3769152)
location: region:3713456-3769152:1
so has part: feature:3713456-3713465:1:exon
so has part: feature:3718187-3718273:1:exon
so has part: feature:3742861-3742955:1:exon
so has part: feature:3752958-3753071:1:exon
so has part: feature:3754447-3754537:1:exon
so has part: feature:3755671-3755750:1:exon
so has part: feature:3761844-3761897:1:exon
so has part: feature:3761983-3762076:1:exon
so has part: feature:3762732-3762827:1:exon
so has part: feature:3764678-3764736:1:exon
so has part: feature:3767017-3767139:1:exon
so has part: feature:3769084-3769152:1:exon

XP_032326793.1
type: Protein
SIO_000068: ncbiprotein

position:3713456:1
position: 3713456
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3769152:1
position: 3769152
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3713456-3713465:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3718187-3718273:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3742861-3742955:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3752958-3753071:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3754447-3754537:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3755671-3755750:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3761844-3761897:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3761983-3762076:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3762732-3762827:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3764678-3764736:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3767017-3767139:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3769084-3769152:1:exon

ANXA10
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 419612
gene: ANXA10
product: annexin A10, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_032470904.1
SIO_010081: ANXA10
subclass of: SO_0000673
so part of: ANXA10
location: join(3718038..3718273,3742861..3742955,3752958..3753071,3754447..3754537,3755671..3755750,3761844..3761897,3761983..3762076,3762732..3762827,3764678..3764736,3767017..3767139,3769084..3769324)
location: region:3718038-3769324:1
so has part: feature:3718038-3718273:1:exon
so has part: feature:3742861-3742955:1:exon
so has part: feature:3752958-3753071:1:exon
so has part: feature:3754447-3754537:1:exon
so has part: feature:3755671-3755750:1:exon
so has part: feature:3761844-3761897:1:exon
so has part: feature:3761983-3762076:1:exon
so has part: feature:3762732-3762827:1:exon
so has part: feature:3764678-3764736:1:exon
so has part: feature:3767017-3767139:1:exon
so has part: feature:3769084-3769324:1:exon

position:3718038:1
position: 3718038
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3718038-3718273:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3742861-3742955:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3752958-3753071:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3754447-3754537:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3755671-3755750:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3761844-3761897:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3761983-3762076:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3762732-3762827:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3764678-3764736:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3767017-3767139:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3769084-3769324:1:exon

ANXA10
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 419612
gene: ANXA10
product: annexin A10, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 9 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_032470903.1
SIO_010081: ANXA10
subclass of: SO_0000673
so part of: ANXA10
location: join(3737492..3737573,3742861..3742955,3752958..3753071,3754447..3754537,3755671..3755750,3761844..3761897,3761983..3762076,3762732..3762827,3764678..3764736,3767017..3767139,3769084..3769324)
location: region:3737492-3769324:1
so has part: feature:3737492-3737573:1:exon
so has part: feature:3742861-3742955:1:exon
so has part: feature:3752958-3753071:1:exon
so has part: feature:3754447-3754537:1:exon
so has part: feature:3755671-3755750:1:exon
so has part: feature:3761844-3761897:1:exon
so has part: feature:3761983-3762076:1:exon
so has part: feature:3762732-3762827:1:exon
so has part: feature:3764678-3764736:1:exon
so has part: feature:3767017-3767139:1:exon
so has part: feature:3769084-3769324:1:exon

position:3737492:1
position: 3737492
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3737492-3737573:1:exon

position:3737573:1
position: 3737573
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3742861-3742955:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3752958-3753071:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3754447-3754537:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3755671-3755750:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3761844-3761897:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3761983-3762076:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3762732-3762827:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3764678-3764736:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3767017-3767139:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3769084-3769324:1:exon

ANXA10
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 419612
gene: ANXA10
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: annexin A10 isoform X2
translation: MQGTIFPAPNFNPVMDAQVLEGALQGFDCDKDLLLDILTQRSGAQRQVIAEAYQGMCGRDLLGDLKEKLSGHFKDVMVGLMYPPPSYDAHELWHAMKGAGTEENCLIDILASRTNGEIFQMREAYYMQYSSDLQEDIYSETSGHFRDTLVNLVQGTREEGYADPAVAAQDAVVLWEACQQRTGEHKTLLQVILCTKSYQQLWLVFQEFQNISGQDIVDAINECYDGYFQELLVAIVLCVRDKPAYFAYRLYSAIHDFGFHNKTVIRIIIARSEIDLMTIRKRYKERYGKSLFHDIKNFASGHYEKALLALCAGDAEDY
SIO_010081: ANXA10
subclass of: SO_0000673
so part of: ANXA10
location: join(3737492..3737573,3742861..3742955,3752958..3753071,3754447..3754537,3755671..3755750,3761844..3761897,3761983..3762076,3762732..3762827,3764678..3764736,3767017..3767139,3769084..3769152)
location: region:3737492-3769152:1
so has part: feature:3737492-3737573:1:exon
so has part: feature:3742861-3742955:1:exon
so has part: feature:3752958-3753071:1:exon
so has part: feature:3754447-3754537:1:exon
so has part: feature:3755671-3755750:1:exon
so has part: feature:3761844-3761897:1:exon
so has part: feature:3761983-3762076:1:exon
so has part: feature:3762732-3762827:1:exon
so has part: feature:3764678-3764736:1:exon
so has part: feature:3767017-3767139:1:exon
so has part: feature:3769084-3769152:1:exon

XP_032326794.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3737492-3737573:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3742861-3742955:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3752958-3753071:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3754447-3754537:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3755671-3755750:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3761844-3761897:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3761983-3762076:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3762732-3762827:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3764678-3764736:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3767017-3767139:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3769084-3769152:1:exon

ANXA10
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 419612
gene: ANXA10
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: annexin A10 isoform X3
translation: MCGRDLLGDLKEKLSGHFKDVMVGLMYPPPSYDAHELWHAMKGAGTEENCLIDILASRTNGEIFQMREAYYMQYSSDLQEDIYSETSGHFRDTLVNLVQGTREEGYADPAVAAQDAVVLWEACQQRTGEHKTLLQVILCTKSYQQLWLVFQEFQNISGQDIVDAINECYDGYFQELLVAIVLCVRDKPAYFAYRLYSAIHDFGFHNKTVIRIIIARSEIDLMTIRKRYKERYGKSLFHDIKNFASGHYEKALLALCAGDAEDY
SIO_010081: ANXA10
subclass of: SO_0000673
so part of: ANXA10
location: join(3742944..3742955,3752958..3753071,3754447..3754537,3755671..3755750,3761844..3761897,3761983..3762076,3762732..3762827,3764678..3764736,3767017..3767139,3769084..3769152)
location: region:3742944-3769152:1
so has part: feature:3742944-3742955:1:exon
so has part: feature:3752958-3753071:1:exon
so has part: feature:3754447-3754537:1:exon
so has part: feature:3755671-3755750:1:exon
so has part: feature:3761844-3761897:1:exon
so has part: feature:3761983-3762076:1:exon
so has part: feature:3762732-3762827:1:exon
so has part: feature:3764678-3764736:1:exon
so has part: feature:3767017-3767139:1:exon
so has part: feature:3769084-3769152:1:exon

XP_032326795.1
type: Protein
SIO_000068: ncbiprotein

position:3742944:1
position: 3742944
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3742944-3742955:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3752958-3753071:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3754447-3754537:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3755671-3755750:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3761844-3761897:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3761983-3762076:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3762732-3762827:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3764678-3764736:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3767017-3767139:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3769084-3769152:1:exon

LOC116660766
type: Gene
subclass of: SO_0000704
RO_0002162: 419612
gene: LOC116660766
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(3750446..3766025)
location: region:3750446-3766025:-1
so has part: feature:3750446-3766025:-1:exon
subclass of: SO_0000011

116660766
type: Gene
SIO_000068: ncbigene

position:3750446:-1
position: 3750446
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3766025:-1
position: 3766025
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3750446-3766025:-1:exon

LOC116660766
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 419612
nc RNA class: lncRNA
gene: LOC116660766
product: uncharacterized LOC116660766, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XR_004316380.1
SIO_010081: LOC116660766
subclass of: SO_0000673
so part of: LOC116660766
location: complement(join(3750446..3750539,3756402..3756567,3765853..3766025))
location: region:3750446-3766025:-1
so has part: feature:3765853-3766025:-1:exon
so has part: feature:3756402-3756567:-1:exon
so has part: feature:3750446-3750539:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3765853-3766025:-1:exon

position:3765853:-1
position: 3765853
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3756402-3756567:-1:exon

position:3756402:-1
position: 3756402
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3756567:-1
position: 3756567
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3750446-3750539:-1:exon

position:3750539:-1
position: 3750539
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC116660766
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 419612
nc RNA class: lncRNA
gene: LOC116660766
product: uncharacterized LOC116660766, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XR_004316381.1
SIO_010081: LOC116660766
subclass of: SO_0000673
so part of: LOC116660766
location: complement(join(3754450..3754529,3756402..3756567,3765853..3766025))
location: region:3754450-3766025:-1
so has part: feature:3765853-3766025:-1:exon
so has part: feature:3756402-3756567:-1:exon
so has part: feature:3754450-3754529:-1:exon

position:3754450:-1
position: 3754450
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3765853-3766025:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3756402-3756567:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3754450-3754529:-1:exon

position:3754529:-1
position: 3754529
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

DDX60
type: Gene
subclass of: SO_0000704
RO_0002162: 419612
gene: DDX60
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(3771545..3794414)
location: region:3771545-3794414:-1
so has part: feature:3771545-3794414:-1:exon
subclass of: SO_0000010

116660729
type: Gene
SIO_000068: ncbigene

position:3771545:-1
position: 3771545
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3794414:-1
position: 3794414
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3771545-3794414:-1:exon

DDX60
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 419612
gene: DDX60
product: DExD/H-box helicase 60
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins
transcript id: XM_032470832.1
SIO_010081: DDX60
subclass of: SO_0000673
so part of: DDX60
location: complement(join(3771545..3771630,3772156..3772266,3772363..3772505,3773342..3773456,3776399..3776495,3777555..3777674,3778022..3778044,3780559..3780673,3781128..3781233,3784672..3784827,3785808..3785949,3789959..3790117,3794400..3794414))
location: region:3771545-3794414:-1
so has part: feature:3794400-3794414:-1:exon
so has part: feature:3789959-3790117:-1:exon
so has part: feature:3785808-3785949:-1:exon
so has part: feature:3784672-3784827:-1:exon
so has part: feature:3781128-3781233:-1:exon
so has part: feature:3780559-3780673:-1:exon
so has part: feature:3778022-3778044:-1:exon
so has part: feature:3777555-3777674:-1:exon
so has part: feature:3776399-3776495:-1:exon
so has part: feature:3773342-3773456:-1:exon
so has part: feature:3772363-3772505:-1:exon
so has part: feature:3772156-3772266:-1:exon
so has part: feature:3771545-3771630:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3794400-3794414:-1:exon

position:3794400:-1
position: 3794400
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3789959-3790117:-1:exon

position:3789959:-1
position: 3789959
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3790117:-1
position: 3790117
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3785808-3785949:-1:exon

position:3785808:-1
position: 3785808
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3785949:-1
position: 3785949
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3784672-3784827:-1:exon

position:3784672:-1
position: 3784672
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3784827:-1
position: 3784827
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:3781128-3781233:-1:exon

position:3781128:-1
position: 3781128
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3781233:-1
position: 3781233
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:3780559-3780673:-1:exon

position:3780559:-1
position: 3780559
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3780673:-1
position: 3780673
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:3778022-3778044:-1:exon

position:3778022:-1
position: 3778022
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3778044:-1
position: 3778044
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:3777555-3777674:-1:exon

position:3777555:-1
position: 3777555
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3777674:-1
position: 3777674
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:3776399-3776495:-1:exon

position:3776399:-1
position: 3776399
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3776495:-1
position: 3776495
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:3773342-3773456:-1:exon

position:3773342:-1
position: 3773342
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3773456:-1
position: 3773456
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:3772363-3772505:-1:exon

position:3772363:-1
position: 3772363
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3772505:-1
position: 3772505
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:3772156-3772266:-1:exon

position:3772156:-1
position: 3772156
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3772266:-1
position: 3772266
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:3771545-3771630:-1:exon

position:3771630:-1
position: 3771630
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

DDX60
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 419612
gene: DDX60
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; substituted 2 bases at 2 genomic stop codons; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
transl except: (pos:complement(3785896..3785898),aa:OTHER)
transl except: (pos:complement(3784751..3784753),aa:OTHER)
product: LOW QUALITY PROTEIN: probable ATP-dependent RNA helicase DDX60
translation: MFFQKGERRGRALGQAEEVCRLRCLAAVLLLRAPLPQRAHARVVASRWTEGIQTASQMKNWCDCFILSNINVFEFXNLNLTHLSNLSDELLLKNTAFYYEEENVQGLRLNLGNVIMKDYEHLRDTVSKLVXKFDVGKPFPLRTTKLPFLRKAPSLIKDTFKDKMPNLGFIPVSCQVVDKFVGDILKDLPFLVSDDPAVALLVRQKEFDELVHWHPXRPLSDDYDRTECQFNDVQGDDPKALVNQVAATVQNCFNKNLPSGEALCGVFTRDYRHDALNSQVLVTVPACFEILLLAPHRQAWVKRIRYVIFDEVHCLAGEIRAEVWEHLLVMIRCPFLALSASISNPQHLTEWPQSVKRCWRQADSTMAKNAASQRPAGPRTGVHRDYALPKQSYKVRLVLYRERYNDLEKHVCSVRDGGIHFDHFHLCAVLTTDHVQRVGVCPEISLSLVLFSLWEGQQFCGH
SIO_010081: DDX60
subclass of: SO_0000673
so part of: DDX60
location: complement(join(3771545..3771630,3772156..3772266,3772363..3772505,3773342..3773456,3776399..3776495,3777555..3777674,3778022..3778044,3780559..3780673,3781128..3781233,3784672..3784827,3785808..3785949,3789959..3790117,3794400..3794414))
location: region:3771545-3794414:-1
so has part: feature:3794400-3794414:-1:exon
so has part: feature:3789959-3790117:-1:exon
so has part: feature:3785808-3785949:-1:exon
so has part: feature:3784672-3784827:-1:exon
so has part: feature:3781128-3781233:-1:exon
so has part: feature:3780559-3780673:-1:exon
so has part: feature:3778022-3778044:-1:exon
so has part: feature:3777555-3777674:-1:exon
so has part: feature:3776399-3776495:-1:exon
so has part: feature:3773342-3773456:-1:exon
so has part: feature:3772363-3772505:-1:exon
so has part: feature:3772156-3772266:-1:exon
so has part: feature:3771545-3771630:-1:exon

XP_032326723.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3794400-3794414:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3789959-3790117:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3785808-3785949:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3784672-3784827:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3781128-3781233:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3780559-3780673:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3778022-3778044:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3777555-3777674:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3776399-3776495:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3773342-3773456:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3772363-3772505:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3772156-3772266:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3771545-3771630:-1:exon

LOC116660744
type: Gene
subclass of: SO_0000704
RO_0002162: 419612
gene: LOC116660744
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 3805399..3809174
location: region:3805399-3809174:1
so has part: feature:3805399-3809174:1:exon
subclass of: SO_0000011

116660744
type: Gene
SIO_000068: ncbigene

position:3805399:1
position: 3805399
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3809174:1
position: 3809174
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3805399-3809174:1:exon

LOC116660744
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 419612
nc RNA class: lncRNA
gene: LOC116660744
product: uncharacterized LOC116660744
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XR_004316345.1
SIO_010081: LOC116660744
subclass of: SO_0000673
so part of: LOC116660744
location: join(3805399..3805530,3805999..3806058,3808285..3809174)
location: region:3805399-3809174:1
so has part: feature:3805399-3805530:1:exon
so has part: feature:3805999-3806058:1:exon
so has part: feature:3808285-3809174:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3805399-3805530:1:exon

position:3805530:1
position: 3805530
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3805999-3806058:1:exon

position:3805999:1
position: 3805999
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3806058:1
position: 3806058
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3808285-3809174:1:exon

position:3808285:1
position: 3808285
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

PALLD
type: Gene
subclass of: SO_0000704
RO_0002162: 419612
gene: PALLD
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 3812880..4096119
location: region:3812880-4096119:1
so has part: feature:3812880-4096119:1:exon
subclass of: SO_0000010

102518513
type: Gene
SIO_000068: ncbigene

position:3812880:1
position: 3812880
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4096119:1
position: 4096119
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3812880-4096119:1:exon

PALLD
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 419612
gene: PALLD
product: palladin, cytoskeletal associated protein, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
transcript id: XM_032470852.1
SIO_010081: PALLD
subclass of: SO_0000673
so part of: PALLD
location: join(3812880..3813033,3816534..3817502,3932193..3932371,3936819..3936885,3938141..3938246,3940581..3940655,3943218..3943359,3943852..3943875,3954010..3954129,3955869..3956205,4064814..4065359,4069580..4069715,4072498..4072596,4073328..4073378,4074445..4074666,4077748..4077897,4085253..4085347,4087929..4088061,4090546..4090753,4092312..4092477,4092951..4093084,4093239..4093283,4094140..4094275)
location: region:3812880-4094275:1
so has part: feature:3812880-3813033:1:exon
so has part: feature:3816534-3817502:1:exon
so has part: feature:3932193-3932371:1:exon
so has part: feature:3936819-3936885:1:exon
so has part: feature:3938141-3938246:1:exon
so has part: feature:3940581-3940655:1:exon
so has part: feature:3943218-3943359:1:exon
so has part: feature:3943852-3943875:1:exon
so has part: feature:3954010-3954129:1:exon
so has part: feature:3955869-3956205:1:exon
so has part: feature:4064814-4065359:1:exon
so has part: feature:4069580-4069715:1:exon
so has part: feature:4072498-4072596:1:exon
so has part: feature:4073328-4073378:1:exon
so has part: feature:4074445-4074666:1:exon
so has part: feature:4077748-4077897:1:exon
so has part: feature:4085253-4085347:1:exon
so has part: feature:4087929-4088061:1:exon
so has part: feature:4090546-4090753:1:exon
so has part: feature:4092312-4092477:1:exon
so has part: feature:4092951-4093084:1:exon
so has part: feature:4093239-4093283:1:exon
so has part: feature:4094140-4094275:1:exon

position:4094275:1
position: 4094275
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3812880-3813033:1:exon

position:3813033:1
position: 3813033
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3816534-3817502:1:exon

position:3816534:1
position: 3816534
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3817502:1
position: 3817502
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3932193-3932371:1:exon

position:3932193:1
position: 3932193
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3932371:1
position: 3932371
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3936819-3936885:1:exon

position:3936819:1
position: 3936819
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3936885:1
position: 3936885
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:3938141-3938246:1:exon

position:3938141:1
position: 3938141
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3938246:1
position: 3938246
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:3940581-3940655:1:exon

position:3940581:1
position: 3940581
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3940655:1
position: 3940655
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:3943218-3943359:1:exon

position:3943218:1
position: 3943218
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3943359:1
position: 3943359
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:3943852-3943875:1:exon

position:3943852:1
position: 3943852
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3943875:1
position: 3943875
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:3954010-3954129:1:exon

position:3954010:1
position: 3954010
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3954129:1
position: 3954129
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:3955869-3956205:1:exon

position:3955869:1
position: 3955869
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3956205:1
position: 3956205
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:4064814-4065359:1:exon

position:4064814:1
position: 4064814
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4065359:1
position: 4065359
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:4069580-4069715:1:exon

position:4069580:1
position: 4069580
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4069715:1
position: 4069715
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:4072498-4072596:1:exon

position:4072498:1
position: 4072498
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4072596:1
position: 4072596
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:4073328-4073378:1:exon

position:4073328:1
position: 4073328
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4073378:1
position: 4073378
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:4074445-4074666:1:exon

position:4074445:1
position: 4074445
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4074666:1
position: 4074666
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:4077748-4077897:1:exon

position:4077748:1
position: 4077748
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4077897:1
position: 4077897
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:4085253-4085347:1:exon

position:4085253:1
position: 4085253
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4085347:1
position: 4085347
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:4087929-4088061:1:exon

position:4087929:1
position: 4087929
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4088061:1
position: 4088061
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:4090546-4090753:1:exon

position:4090546:1
position: 4090546
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4090753:1
position: 4090753
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:4092312-4092477:1:exon

position:4092312:1
position: 4092312
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4092477:1
position: 4092477
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:4092951-4093084:1:exon

position:4092951:1
position: 4092951
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4093084:1
position: 4093084
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:4093239-4093283:1:exon

position:4093239:1
position: 4093239
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4093283:1
position: 4093283
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:4094140-4094275:1:exon

position:4094140:1
position: 4094140
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

PALLD
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 419612
gene: PALLD
product: palladin, cytoskeletal associated protein, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
transcript id: XM_032470850.1
SIO_010081: PALLD
subclass of: SO_0000673
so part of: PALLD
location: join(3812881..3813033,3816534..3817502,3932193..3932371,3936819..3936885,3938141..3938246,3940581..3940655,3943218..3943359,3943852..3943875,3954010..3954129,3955869..3956205,4064814..4065359,4069580..4069715,4072498..4072596,4073328..4073378,4074445..4074666,4077748..4077897,4085253..4085347,4087929..4088061,4090546..4090753,4092312..4092477,4092951..4093084,4094140..4096119)
location: region:3812881-4096119:1
so has part: feature:3812881-3813033:1:exon
so has part: feature:3816534-3817502:1:exon
so has part: feature:3932193-3932371:1:exon
so has part: feature:3936819-3936885:1:exon
so has part: feature:3938141-3938246:1:exon
so has part: feature:3940581-3940655:1:exon
so has part: feature:3943218-3943359:1:exon
so has part: feature:3943852-3943875:1:exon
so has part: feature:3954010-3954129:1:exon
so has part: feature:3955869-3956205:1:exon
so has part: feature:4064814-4065359:1:exon
so has part: feature:4069580-4069715:1:exon
so has part: feature:4072498-4072596:1:exon
so has part: feature:4073328-4073378:1:exon
so has part: feature:4074445-4074666:1:exon
so has part: feature:4077748-4077897:1:exon
so has part: feature:4085253-4085347:1:exon
so has part: feature:4087929-4088061:1:exon
so has part: feature:4090546-4090753:1:exon
so has part: feature:4092312-4092477:1:exon
so has part: feature:4092951-4093084:1:exon
so has part: feature:4094140-4096119:1:exon

position:3812881:1
position: 3812881
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3812881-3813033:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3816534-3817502:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3932193-3932371:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3936819-3936885:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3938141-3938246:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3940581-3940655:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3943218-3943359:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3943852-3943875:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3954010-3954129:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3955869-3956205:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:4064814-4065359:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:4069580-4069715:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:4072498-4072596:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:4073328-4073378:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:4074445-4074666:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:4077748-4077897:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:4085253-4085347:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:4087929-4088061:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:4090546-4090753:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:4092312-4092477:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:4092951-4093084:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:4094140-4096119:1:exon

PALLD
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 419612
gene: PALLD
product: palladin, cytoskeletal associated protein, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 13 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
transcript id: XM_032470851.1
SIO_010081: PALLD
subclass of: SO_0000673
so part of: PALLD
location: join(3812882..3813033,3816534..3817502,3932193..3932371,3936819..3936885,3938141..3938246,3940581..3940655,3943218..3943359,3943852..3943875,3954010..3954129,3955869..3956205,4064814..4065359,4069580..4069715,4072498..4072596,4074445..4074666,4077748..4077897,4085253..4085347,4087929..4088061,4090546..4090753,4092312..4092477,4092951..4093084,4094140..4096119)
location: region:3812882-4096119:1
so has part: feature:3812882-3813033:1:exon
so has part: feature:3816534-3817502:1:exon
so has part: feature:3932193-3932371:1:exon
so has part: feature:3936819-3936885:1:exon
so has part: feature:3938141-3938246:1:exon
so has part: feature:3940581-3940655:1:exon
so has part: feature:3943218-3943359:1:exon
so has part: feature:3943852-3943875:1:exon
so has part: feature:3954010-3954129:1:exon
so has part: feature:3955869-3956205:1:exon
so has part: feature:4064814-4065359:1:exon
so has part: feature:4069580-4069715:1:exon
so has part: feature:4072498-4072596:1:exon
so has part: feature:4074445-4074666:1:exon
so has part: feature:4077748-4077897:1:exon
so has part: feature:4085253-4085347:1:exon
so has part: feature:4087929-4088061:1:exon
so has part: feature:4090546-4090753:1:exon
so has part: feature:4092312-4092477:1:exon
so has part: feature:4092951-4093084:1:exon
so has part: feature:4094140-4096119:1:exon

position:3812882:1
position: 3812882
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3812882-3813033:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3816534-3817502:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3932193-3932371:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3936819-3936885:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3938141-3938246:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3940581-3940655:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3943218-3943359:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3943852-3943875:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3954010-3954129:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3955869-3956205:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:4064814-4065359:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:4069580-4069715:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:4072498-4072596:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:4074445-4074666:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:4077748-4077897:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:4085253-4085347:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:4087929-4088061:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:4090546-4090753:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:4092312-4092477:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:4092951-4093084:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:4094140-4096119:1:exon

PALLD
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 419612
gene: PALLD
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: palladin isoform X1
translation: MSETSSPDSFYDSLSDVQEDDRDAAFFPGLSAFLSQEEIHRSLDLARRAIANSEAEDCASETEIPQVVSRSPGSLCGRPSHQEGGGSGEPTAPGRPLDPRPTRGQPPPAERAGHVASPGPRRRAAASPLLASPSYIRSLRRAGKHRAQPPDPSATPRAPHPGRAGPQSQLCDKAASFIQELTSIFREAARPRNSSPNGESSPDSGYLSPKNQPLALESTSASRSPNGDGQEEEAARLPEPRMRTSPPARDAVQPCGRSPPPPPSARSLPTAPRFTQKLRSQEVAEGSRVYLECRVAGHPPPRVRWFCEGRELHDSPDIQIRCAGGDLHTLVIAEAFEDDTGRYTCLATNPSGSDTTSAEVFIEGASSTDSDSESSAFRARPGAMPQAQKKTTSVSLTIGSSSPKTGVTTAVIQPLSVPVQQAPSPASCLCRPDGPPAASFPPVFTKELQNIAASEGQVVVLECRVRGAPPLQVRWFRQGSEIQDSPDFRILQKKPRSTAEPEEICTLVIAETFPEDAGIFTCSASNDYGSVTSTAQLVVTSANMENCGYDSAGEAGSDHFQHLPPPPPVWETGPFELASKKPAELQQVNSPEIGLSTAALQPSSPDREARGVHPGHGVNGLINGKADGSVSPPAPAGLPSPAKEPPPVLARPKLDALRIQQLQHQIRLEREARARPSPPASPEPASPGPARPDPMSALAARPAPAMQASGSFSYARPKQFIAAQSLGPGAPHPGPGAPGPPAGRAPLPEPEHPWGALPPPPPPLSPPPGSPGSDVFPPPPPPPPPGPGPRASARPGPSPAPAALLRALLPSPPATGTPSVTTSVSPLGLPRAALAAGYPKKAGRPARVASDEEIQGSKDAVIQDLERKLRFKEDLLNNGQPRLTYEERMARRLLGAGSATVLSAPEPEEEAASQDPGSPHASVGSPLDGQKEYKVSSCEQRLISEIEYRLERCPVEDPEEEAPWGDVATEDGVAPLFQVKLRHYKIFEGMPVTFTCKVTGSPKPKIYWFKDGKQISPRNQHYSLQSDPDGTCSLRAAAATLEDDGNYTVLAANPQGRVSCTGRLMVQAVNQRGRSPRPSSGHPHGRRPRSRSRDSADESEPIQERFFRPHFLQAPGDLTIQEGRLCRMDCKVSGLPTPDLTWQLDGRPVRPDSAHRMLVRENGVHSLVIEPVTARDAGIYTCVATNRAGQNAFSLELVVAAKEAYKAPVFLEKLQNTGVADGYPVRLECRVSGAPPPQIFWKKENESLTHSTDRVSMHQDPHGYVCLLIQGATKDDAGWYTVSAKNEAGIVSCTARLDVYTQWQQPAQSTKPKRVRPSASRYAALSDQGLDIRAAFQPEASPSHLALSPGLVESEDL
SIO_010081: PALLD
subclass of: SO_0000673
so part of: PALLD
location: join(3816592..3817502,3932193..3932371,3936819..3936885,3938141..3938246,3940581..3940655,3943218..3943359,3943852..3943875,3954010..3954129,3955869..3956205,4064814..4065359,4069580..4069715,4072498..4072596,4073328..4073378,4074445..4074666,4077748..4077897,4085253..4085347,4087929..4088061,4090546..4090753,4092312..4092477,4092951..4093084,4094140..4094312)
location: region:3816592-4094312:1
so has part: feature:3816592-3817502:1:exon
so has part: feature:3932193-3932371:1:exon
so has part: feature:3936819-3936885:1:exon
so has part: feature:3938141-3938246:1:exon
so has part: feature:3940581-3940655:1:exon
so has part: feature:3943218-3943359:1:exon
so has part: feature:3943852-3943875:1:exon
so has part: feature:3954010-3954129:1:exon
so has part: feature:3955869-3956205:1:exon
so has part: feature:4064814-4065359:1:exon
so has part: feature:4069580-4069715:1:exon
so has part: feature:4072498-4072596:1:exon
so has part: feature:4073328-4073378:1:exon
so has part: feature:4074445-4074666:1:exon
so has part: feature:4077748-4077897:1:exon
so has part: feature:4085253-4085347:1:exon
so has part: feature:4087929-4088061:1:exon
so has part: feature:4090546-4090753:1:exon
so has part: feature:4092312-4092477:1:exon
so has part: feature:4092951-4093084:1:exon
so has part: feature:4094140-4094312:1:exon

XP_032326741.1
type: Protein
SIO_000068: ncbiprotein

position:3816592:1
position: 3816592
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4094312:1
position: 4094312
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3816592-3817502:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3932193-3932371:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3936819-3936885:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3938141-3938246:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3940581-3940655:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3943218-3943359:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3943852-3943875:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3954010-3954129:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3955869-3956205:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4064814-4065359:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:4069580-4069715:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:4072498-4072596:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:4073328-4073378:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:4074445-4074666:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:4077748-4077897:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:4085253-4085347:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:4087929-4088061:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:4090546-4090753:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:4092312-4092477:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:4092951-4093084:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:4094140-4094312:1:exon

PALLD
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 419612
gene: PALLD
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: palladin isoform X2
translation: MSETSSPDSFYDSLSDVQEDDRDAAFFPGLSAFLSQEEIHRSLDLARRAIANSEAEDCASETEIPQVVSRSPGSLCGRPSHQEGGGSGEPTAPGRPLDPRPTRGQPPPAERAGHVASPGPRRRAAASPLLASPSYIRSLRRAGKHRAQPPDPSATPRAPHPGRAGPQSQLCDKAASFIQELTSIFREAARPRNSSPNGESSPDSGYLSPKNQPLALESTSASRSPNGDGQEEEAARLPEPRMRTSPPARDAVQPCGRSPPPPPSARSLPTAPRFTQKLRSQEVAEGSRVYLECRVAGHPPPRVRWFCEGRELHDSPDIQIRCAGGDLHTLVIAEAFEDDTGRYTCLATNPSGSDTTSAEVFIEGASSTDSDSESSAFRARPGAMPQAQKKTTSVSLTIGSSSPKTGVTTAVIQPLSVPVQQAPSPASCLCRPDGPPAASFPPVFTKELQNIAASEGQVVVLECRVRGAPPLQVRWFRQGSEIQDSPDFRILQKKPRSTAEPEEICTLVIAETFPEDAGIFTCSASNDYGSVTSTAQLVVTSANMENCGYDSAGEAGSDHFQHLPPPPPVWETGPFELASKKPAELQQVNSPEIGLSTAALQPSSPDREARGVHPGHGVNGLINGKADGSVSPPAPAGLPSPAKEPPPVLARPKLDALRIQQLQHQIRLEREARARPSPPASPEPASPGPARPDPMSALAARPAPAMQASGSFSYARPKQFIAAQSLGPGAPHPGPGAPGPPAGRAPLPEPEHPWGALPPPPPPLSPPPGSPGSDVFPPPPPPPPPGPGPRASARPGPSPAPAALLRALLPSPPATGTPSVTTSVSPLGLPRAALAAGYPKKAGRPARVASDEEIQGSKDAVIQDLERKLRFKEDLLNNGQPRLTYEERMARRLLGAGSATVLSAPEPEEEAASQEYKVSSCEQRLISEIEYRLERCPVEDPEEEAPWGDVATEDGVAPLFQVKLRHYKIFEGMPVTFTCKVTGSPKPKIYWFKDGKQISPRNQHYSLQSDPDGTCSLRAAAATLEDDGNYTVLAANPQGRVSCTGRLMVQAVNQRGRSPRPSSGHPHGRRPRSRSRDSADESEPIQERFFRPHFLQAPGDLTIQEGRLCRMDCKVSGLPTPDLTWQLDGRPVRPDSAHRMLVRENGVHSLVIEPVTARDAGIYTCVATNRAGQNAFSLELVVAAKEAYKAPVFLEKLQNTGVADGYPVRLECRVSGAPPPQIFWKKENESLTHSTDRVSMHQDPHGYVCLLIQGATKDDAGWYTVSAKNEAGIVSCTARLDVYTQWQQPAQSTKPKRVRPSASRYAALSDQGLDIRAAFQPEASPSHLALSPGLVESEDL
SIO_010081: PALLD
subclass of: SO_0000673
so part of: PALLD
location: join(3816592..3817502,3932193..3932371,3936819..3936885,3938141..3938246,3940581..3940655,3943218..3943359,3943852..3943875,3954010..3954129,3955869..3956205,4064814..4065359,4069580..4069715,4072498..4072596,4074445..4074666,4077748..4077897,4085253..4085347,4087929..4088061,4090546..4090753,4092312..4092477,4092951..4093084,4094140..4094312)
location: region:3816592-4094312:1
so has part: feature:3816592-3817502:1:exon
so has part: feature:3932193-3932371:1:exon
so has part: feature:3936819-3936885:1:exon
so has part: feature:3938141-3938246:1:exon
so has part: feature:3940581-3940655:1:exon
so has part: feature:3943218-3943359:1:exon
so has part: feature:3943852-3943875:1:exon
so has part: feature:3954010-3954129:1:exon
so has part: feature:3955869-3956205:1:exon
so has part: feature:4064814-4065359:1:exon
so has part: feature:4069580-4069715:1:exon
so has part: feature:4072498-4072596:1:exon
so has part: feature:4074445-4074666:1:exon
so has part: feature:4077748-4077897:1:exon
so has part: feature:4085253-4085347:1:exon
so has part: feature:4087929-4088061:1:exon
so has part: feature:4090546-4090753:1:exon
so has part: feature:4092312-4092477:1:exon
so has part: feature:4092951-4093084:1:exon
so has part: feature:4094140-4094312:1:exon

XP_032326742.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3816592-3817502:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3932193-3932371:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3936819-3936885:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3938141-3938246:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3940581-3940655:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3943218-3943359:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3943852-3943875:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3954010-3954129:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3955869-3956205:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4064814-4065359:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:4069580-4069715:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:4072498-4072596:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:4074445-4074666:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:4077748-4077897:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:4085253-4085347:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:4087929-4088061:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:4090546-4090753:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:4092312-4092477:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:4092951-4093084:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:4094140-4094312:1:exon

PALLD
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 419612
gene: PALLD
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: palladin isoform X3
translation: MSETSSPDSFYDSLSDVQEDDRDAAFFPGLSAFLSQEEIHRSLDLARRAIANSEAEDCASETEIPQVVSRSPGSLCGRPSHQEGGGSGEPTAPGRPLDPRPTRGQPPPAERAGHVASPGPRRRAAASPLLASPSYIRSLRRAGKHRAQPPDPSATPRAPHPGRAGPQSQLCDKAASFIQELTSIFREAARPRNSSPNGESSPDSGYLSPKNQPLALESTSASRSPNGDGQEEEAARLPEPRMRTSPPARDAVQPCGRSPPPPPSARSLPTAPRFTQKLRSQEVAEGSRVYLECRVAGHPPPRVRWFCEGRELHDSPDIQIRCAGGDLHTLVIAEAFEDDTGRYTCLATNPSGSDTTSAEVFIEGASSTDSDSESSAFRARPGAMPQAQKKTTSVSLTIGSSSPKTGVTTAVIQPLSVPVQQAPSPASCLCRPDGPPAASFPPVFTKELQNIAASEGQVVVLECRVRGAPPLQVRWFRQGSEIQDSPDFRILQKKPRSTAEPEEICTLVIAETFPEDAGIFTCSASNDYGSVTSTAQLVVTSANMENCGYDSAGEAGSDHFQHLPPPPPVWETGPFELASKKPAELQQVNSPEIGLSTAALQPSSPDREARGVHPGHGVNGLINGKADGSVSPPAPAGLPSPAKEPPPVLARPKLDALRIQQLQHQIRLEREARARPSPPASPEPASPGPARPDPMSALAARPAPAMQASGSFSYARPKQFIAAQSLGPGAPHPGPGAPGPPAGRAPLPEPEHPWGALPPPPPPLSPPPGSPGSDVFPPPPPPPPPGPGPRASARPGPSPAPAALLRALLPSPPATGTPSVTTSVSPLGLPRAALAAGYPKKAGRPARVASDEEIQGSKDAVIQDLERKLRFKEDLLNNGQPRLTYEERMARRLLGAGSATVLSAPEPEEEAASQDPGSPHASVGSPLDGQKEYKVSSCEQRLISEIEYRLERCPVEDPEEEAPWGDVATEDGVAPLFQVKLRHYKIFEGMPVTFTCKVTGSPKPKIYWFKDGKQISPRNQHYSLQSDPDGTCSLRAAAATLEDDGNYTVLAANPQGRVSCTGRLMVQAVNQRGRSPRPSSGHPHGRRPRSRSRDSADESEPIQERFFRPHFLQAPGDLTIQEGRLCRMDCKVSGLPTPDLTWQLDGRPVRPDSAHRMLVRENGVHSLVIEPVTARDAGIYTCVATNRAGQNAFSLELVVAAKEAYKAPVFLEKLQNTGVADGYPVRLECRVSGAPPPQIFWKKENESLTHSTDRVSMHQDPHGYVCLLIQGATKDDAGWYTVSAKNEAGIVSCTARLDVYISQH
SIO_010081: PALLD
subclass of: SO_0000673
so part of: PALLD
location: join(3816592..3817502,3932193..3932371,3936819..3936885,3938141..3938246,3940581..3940655,3943218..3943359,3943852..3943875,3954010..3954129,3955869..3956205,4064814..4065359,4069580..4069715,4072498..4072596,4073328..4073378,4074445..4074666,4077748..4077897,4085253..4085347,4087929..4088061,4090546..4090753,4092312..4092477,4092951..4093084,4093239..4093252)
location: region:3816592-4093252:1
so has part: feature:3816592-3817502:1:exon
so has part: feature:3932193-3932371:1:exon
so has part: feature:3936819-3936885:1:exon
so has part: feature:3938141-3938246:1:exon
so has part: feature:3940581-3940655:1:exon
so has part: feature:3943218-3943359:1:exon
so has part: feature:3943852-3943875:1:exon
so has part: feature:3954010-3954129:1:exon
so has part: feature:3955869-3956205:1:exon
so has part: feature:4064814-4065359:1:exon
so has part: feature:4069580-4069715:1:exon
so has part: feature:4072498-4072596:1:exon
so has part: feature:4073328-4073378:1:exon
so has part: feature:4074445-4074666:1:exon
so has part: feature:4077748-4077897:1:exon
so has part: feature:4085253-4085347:1:exon
so has part: feature:4087929-4088061:1:exon
so has part: feature:4090546-4090753:1:exon
so has part: feature:4092312-4092477:1:exon
so has part: feature:4092951-4093084:1:exon
so has part: feature:4093239-4093252:1:exon

XP_032326743.1
type: Protein
SIO_000068: ncbiprotein

position:4093252:1
position: 4093252
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3816592-3817502:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3932193-3932371:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3936819-3936885:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3938141-3938246:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3940581-3940655:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3943218-3943359:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3943852-3943875:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3954010-3954129:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3955869-3956205:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4064814-4065359:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:4069580-4069715:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:4072498-4072596:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:4073328-4073378:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:4074445-4074666:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:4077748-4077897:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:4085253-4085347:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:4087929-4088061:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:4090546-4090753:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:4092312-4092477:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:4092951-4093084:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:4093239-4093252:1:exon

LOC116660742
type: Gene
subclass of: SO_0000704
RO_0002162: 419612
gene: LOC116660742
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(3819198..3833198)
location: region:3819198-3833198:-1
so has part: feature:3819198-3833198:-1:exon
subclass of: SO_0000011

116660742
type: Gene
SIO_000068: ncbigene

position:3819198:-1
position: 3819198
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3833198:-1
position: 3833198
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3819198-3833198:-1:exon

LOC116660742
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 419612
nc RNA class: lncRNA
gene: LOC116660742
product: uncharacterized LOC116660742
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XR_004316336.1
SIO_010081: LOC116660742
subclass of: SO_0000673
so part of: LOC116660742
location: complement(join(3819198..3819326,3822494..3822635,3833102..3833198))
location: region:3819198-3833198:-1
so has part: feature:3833102-3833198:-1:exon
so has part: feature:3822494-3822635:-1:exon
so has part: feature:3819198-3819326:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3833102-3833198:-1:exon

position:3833102:-1
position: 3833102
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3822494-3822635:-1:exon

position:3822494:-1
position: 3822494
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3822635:-1
position: 3822635
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3819198-3819326:-1:exon

position:3819326:-1
position: 3819326
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC116660741
type: Gene
subclass of: SO_0000704
RO_0002162: 419612
gene: LOC116660741
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 3825786..3832683
location: region:3825786-3832683:1
so has part: feature:3825786-3832683:1:exon
subclass of: SO_0000011

116660741
type: Gene
SIO_000068: ncbigene

position:3825786:1
position: 3825786
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3832683:1
position: 3832683
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3825786-3832683:1:exon

LOC116660741
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 419612
nc RNA class: lncRNA
gene: LOC116660741
product: uncharacterized LOC116660741
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XR_004316335.1
SIO_010081: LOC116660741
subclass of: SO_0000673
so part of: LOC116660741
location: join(3825786..3827301,3827997..3830477,3830594..3832683)
location: region:3825786-3832683:1
so has part: feature:3825786-3827301:1:exon
so has part: feature:3827997-3830477:1:exon
so has part: feature:3830594-3832683:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3825786-3827301:1:exon

position:3827301:1
position: 3827301
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3827997-3830477:1:exon

position:3827997:1
position: 3827997
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3830477:1
position: 3830477
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3830594-3832683:1:exon

position:3830594:1
position: 3830594
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

PALLD
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 419612
gene: PALLD
product: palladin, cytoskeletal associated protein, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 19 samples with support for all annotated introns
transcript id: XM_032470853.1
SIO_010081: PALLD
subclass of: SO_0000673
so part of: PALLD
location: join(3902040..3902198,3932193..3932371,3936819..3936885,3938141..3938246,3940581..3940655,3943218..3943359,3943852..3943875,3954010..3954129,3955869..3956205,4064814..4065359,4069580..4069715,4072498..4072596,4073328..4073378,4074445..4074666,4077748..4077897,4085253..4085347,4087929..4088061,4090546..4090753,4092312..4092477,4092951..4093084,4094140..4096119)
location: region:3902040-4096119:1
so has part: feature:3902040-3902198:1:exon
so has part: feature:3932193-3932371:1:exon
so has part: feature:3936819-3936885:1:exon
so has part: feature:3938141-3938246:1:exon
so has part: feature:3940581-3940655:1:exon
so has part: feature:3943218-3943359:1:exon
so has part: feature:3943852-3943875:1:exon
so has part: feature:3954010-3954129:1:exon
so has part: feature:3955869-3956205:1:exon
so has part: feature:4064814-4065359:1:exon
so has part: feature:4069580-4069715:1:exon
so has part: feature:4072498-4072596:1:exon
so has part: feature:4073328-4073378:1:exon
so has part: feature:4074445-4074666:1:exon
so has part: feature:4077748-4077897:1:exon
so has part: feature:4085253-4085347:1:exon
so has part: feature:4087929-4088061:1:exon
so has part: feature:4090546-4090753:1:exon
so has part: feature:4092312-4092477:1:exon
so has part: feature:4092951-4093084:1:exon
so has part: feature:4094140-4096119:1:exon

position:3902040:1
position: 3902040
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3902040-3902198:1:exon

position:3902198:1
position: 3902198
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3932193-3932371:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3936819-3936885:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3938141-3938246:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3940581-3940655:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3943218-3943359:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3943852-3943875:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3954010-3954129:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3955869-3956205:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4064814-4065359:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:4069580-4069715:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:4072498-4072596:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:4073328-4073378:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:4074445-4074666:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:4077748-4077897:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:4085253-4085347:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:4087929-4088061:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:4090546-4090753:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:4092312-4092477:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:4092951-4093084:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:4094140-4096119:1:exon

PALLD
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 419612
gene: PALLD
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: palladin isoform X4
translation: MPQAQKKTTSVSLTIGSSSPKTGVTTAVIQPLSVPVQQAPSPASCLCRPDGPPAASFPPVFTKELQNIAASEGQVVVLECRVRGAPPLQVRWFRQGSEIQDSPDFRILQKKPRSTAEPEEICTLVIAETFPEDAGIFTCSASNDYGSVTSTAQLVVTSANMENCGYDSAGEAGSDHFQHLPPPPPVWETGPFELASKKPAELQQVNSPEIGLSTAALQPSSPDREARGVHPGHGVNGLINGKADGSVSPPAPAGLPSPAKEPPPVLARPKLDALRIQQLQHQIRLEREARARPSPPASPEPASPGPARPDPMSALAARPAPAMQASGSFSYARPKQFIAAQSLGPGAPHPGPGAPGPPAGRAPLPEPEHPWGALPPPPPPLSPPPGSPGSDVFPPPPPPPPPGPGPRASARPGPSPAPAALLRALLPSPPATGTPSVTTSVSPLGLPRAALAAGYPKKAGRPARVASDEEIQGSKDAVIQDLERKLRFKEDLLNNGQPRLTYEERMARRLLGAGSATVLSAPEPEEEAASQDPGSPHASVGSPLDGQKEYKVSSCEQRLISEIEYRLERCPVEDPEEEAPWGDVATEDGVAPLFQVKLRHYKIFEGMPVTFTCKVTGSPKPKIYWFKDGKQISPRNQHYSLQSDPDGTCSLRAAAATLEDDGNYTVLAANPQGRVSCTGRLMVQAVNQRGRSPRPSSGHPHGRRPRSRSRDSADESEPIQERFFRPHFLQAPGDLTIQEGRLCRMDCKVSGLPTPDLTWQLDGRPVRPDSAHRMLVRENGVHSLVIEPVTARDAGIYTCVATNRAGQNAFSLELVVAAKEAYKAPVFLEKLQNTGVADGYPVRLECRVSGAPPPQIFWKKENESLTHSTDRVSMHQDPHGYVCLLIQGATKDDAGWYTVSAKNEAGIVSCTARLDVYTQWQQPAQSTKPKRVRPSASRYAALSDQGLDIRAAFQPEASPSHLALSPGLVESEDL
SIO_010081: PALLD
subclass of: SO_0000673
so part of: PALLD
location: join(3936878..3936885,3938141..3938246,3940581..3940655,3943218..3943359,3943852..3943875,3954010..3954129,3955869..3956205,4064814..4065359,4069580..4069715,4072498..4072596,4073328..4073378,4074445..4074666,4077748..4077897,4085253..4085347,4087929..4088061,4090546..4090753,4092312..4092477,4092951..4093084,4094140..4094312)
location: region:3936878-4094312:1
so has part: feature:3936878-3936885:1:exon
so has part: feature:3938141-3938246:1:exon
so has part: feature:3940581-3940655:1:exon
so has part: feature:3943218-3943359:1:exon
so has part: feature:3943852-3943875:1:exon
so has part: feature:3954010-3954129:1:exon
so has part: feature:3955869-3956205:1:exon
so has part: feature:4064814-4065359:1:exon
so has part: feature:4069580-4069715:1:exon
so has part: feature:4072498-4072596:1:exon
so has part: feature:4073328-4073378:1:exon
so has part: feature:4074445-4074666:1:exon
so has part: feature:4077748-4077897:1:exon
so has part: feature:4085253-4085347:1:exon
so has part: feature:4087929-4088061:1:exon
so has part: feature:4090546-4090753:1:exon
so has part: feature:4092312-4092477:1:exon
so has part: feature:4092951-4093084:1:exon
so has part: feature:4094140-4094312:1:exon

XP_032326744.1
type: Protein
SIO_000068: ncbiprotein

position:3936878:1
position: 3936878
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3936878-3936885:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3938141-3938246:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3940581-3940655:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3943218-3943359:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3943852-3943875:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3954010-3954129:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3955869-3956205:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4064814-4065359:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4069580-4069715:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4072498-4072596:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:4073328-4073378:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:4074445-4074666:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:4077748-4077897:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:4085253-4085347:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:4087929-4088061:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:4090546-4090753:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:4092312-4092477:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:4092951-4093084:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:4094140-4094312:1:exon

PALLD
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 419612
gene: PALLD
product: palladin, cytoskeletal associated protein, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 21 samples with support for all annotated introns
transcript id: XM_032470854.1
SIO_010081: PALLD
subclass of: SO_0000673
so part of: PALLD
location: join(4028097..4028230,4064814..4065359,4069580..4069715,4072498..4072596,4073328..4073378,4074445..4074666,4077748..4077897,4085253..4085347,4087929..4088061,4090546..4090753,4092312..4092477,4092951..4093084,4094140..4096119)
location: region:4028097-4096119:1
so has part: feature:4028097-4028230:1:exon
so has part: feature:4064814-4065359:1:exon
so has part: feature:4069580-4069715:1:exon
so has part: feature:4072498-4072596:1:exon
so has part: feature:4073328-4073378:1:exon
so has part: feature:4074445-4074666:1:exon
so has part: feature:4077748-4077897:1:exon
so has part: feature:4085253-4085347:1:exon
so has part: feature:4087929-4088061:1:exon
so has part: feature:4090546-4090753:1:exon
so has part: feature:4092312-4092477:1:exon
so has part: feature:4092951-4093084:1:exon
so has part: feature:4094140-4096119:1:exon

position:4028097:1
position: 4028097
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4028097-4028230:1:exon

position:4028230:1
position: 4028230
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4064814-4065359:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4069580-4069715:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4072498-4072596:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4073328-4073378:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4074445-4074666:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4077748-4077897:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4085253-4085347:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4087929-4088061:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4090546-4090753:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:4092312-4092477:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:4092951-4093084:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:4094140-4096119:1:exon

PALLD
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 419612
gene: PALLD
product: palladin, cytoskeletal associated protein, transcript variant X7
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 16 samples with support for all annotated introns
transcript id: XM_032470856.1
SIO_010081: PALLD
subclass of: SO_0000673
so part of: PALLD
location: join(4028140..4028230,4069580..4069715,4072498..4072596,4073328..4073378,4074445..4074666,4077748..4077897,4085253..4085347,4087929..4088061,4090546..4090753,4092312..4092477,4092951..4093084,4094140..4096119)
location: region:4028140-4096119:1
so has part: feature:4028140-4028230:1:exon
so has part: feature:4069580-4069715:1:exon
so has part: feature:4072498-4072596:1:exon
so has part: feature:4073328-4073378:1:exon
so has part: feature:4074445-4074666:1:exon
so has part: feature:4077748-4077897:1:exon
so has part: feature:4085253-4085347:1:exon
so has part: feature:4087929-4088061:1:exon
so has part: feature:4090546-4090753:1:exon
so has part: feature:4092312-4092477:1:exon
so has part: feature:4092951-4093084:1:exon
so has part: feature:4094140-4096119:1:exon

position:4028140:1
position: 4028140
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4028140-4028230:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4069580-4069715:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4072498-4072596:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4073328-4073378:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4074445-4074666:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4077748-4077897:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4085253-4085347:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4087929-4088061:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4090546-4090753:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4092312-4092477:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:4092951-4093084:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:4094140-4096119:1:exon

PALLD
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 419612
gene: PALLD
product: palladin, cytoskeletal associated protein, transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 20 samples with support for all annotated introns
transcript id: XM_032470855.1
SIO_010081: PALLD
subclass of: SO_0000673
so part of: PALLD
location: join(4028143..4028230,4069580..4069715,4072498..4072596,4074445..4074666,4077748..4077897,4085253..4085347,4087929..4088061,4090546..4090753,4092312..4092477,4092951..4093084,4094140..4096119)
location: region:4028143-4096119:1
so has part: feature:4028143-4028230:1:exon
so has part: feature:4069580-4069715:1:exon
so has part: feature:4072498-4072596:1:exon
so has part: feature:4074445-4074666:1:exon
so has part: feature:4077748-4077897:1:exon
so has part: feature:4085253-4085347:1:exon
so has part: feature:4087929-4088061:1:exon
so has part: feature:4090546-4090753:1:exon
so has part: feature:4092312-4092477:1:exon
so has part: feature:4092951-4093084:1:exon
so has part: feature:4094140-4096119:1:exon

position:4028143:1
position: 4028143
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4028143-4028230:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4069580-4069715:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4072498-4072596:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4074445-4074666:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4077748-4077897:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4085253-4085347:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4087929-4088061:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4090546-4090753:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4092312-4092477:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4092951-4093084:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:4094140-4096119:1:exon

PALLD
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 419612
gene: PALLD
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: palladin isoform X5
translation: MSALAARPAPAMQASGSFSYARPKQFIAAQSLGPGAPHPGPGAPGPPAGRAPLPEPEHPWGALPPPPPPLSPPPGSPGSDVFPPPPPPPPPGPGPRASARPGPSPAPAALLRALLPSPPATGTPSVTTSVSPLGLPRAALAAGYPKKAGRPARVASDEEIQGSKDAVIQDLERKLRFKEDLLNNGQPRLTYEERMARRLLGAGSATVLSAPEPEEEAASQDPGSPHASVGSPLDGQKEYKVSSCEQRLISEIEYRLERCPVEDPEEEAPWGDVATEDGVAPLFQVKLRHYKIFEGMPVTFTCKVTGSPKPKIYWFKDGKQISPRNQHYSLQSDPDGTCSLRAAAATLEDDGNYTVLAANPQGRVSCTGRLMVQAVNQRGRSPRPSSGHPHGRRPRSRSRDSADESEPIQERFFRPHFLQAPGDLTIQEGRLCRMDCKVSGLPTPDLTWQLDGRPVRPDSAHRMLVRENGVHSLVIEPVTARDAGIYTCVATNRAGQNAFSLELVVAAKEAYKAPVFLEKLQNTGVADGYPVRLECRVSGAPPPQIFWKKENESLTHSTDRVSMHQDPHGYVCLLIQGATKDDAGWYTVSAKNEAGIVSCTARLDVYTQWQQPAQSTKPKRVRPSASRYAALSDQGLDIRAAFQPEASPSHLALSPGLVESEDL
SIO_010081: PALLD
subclass of: SO_0000673
so part of: PALLD
location: join(4064935..4065359,4069580..4069715,4072498..4072596,4073328..4073378,4074445..4074666,4077748..4077897,4085253..4085347,4087929..4088061,4090546..4090753,4092312..4092477,4092951..4093084,4094140..4094312)
location: region:4064935-4094312:1
so has part: feature:4064935-4065359:1:exon
so has part: feature:4069580-4069715:1:exon
so has part: feature:4072498-4072596:1:exon
so has part: feature:4073328-4073378:1:exon
so has part: feature:4074445-4074666:1:exon
so has part: feature:4077748-4077897:1:exon
so has part: feature:4085253-4085347:1:exon
so has part: feature:4087929-4088061:1:exon
so has part: feature:4090546-4090753:1:exon
so has part: feature:4092312-4092477:1:exon
so has part: feature:4092951-4093084:1:exon
so has part: feature:4094140-4094312:1:exon

XP_032326745.1
type: Protein
SIO_000068: ncbiprotein

position:4064935:1
position: 4064935
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4064935-4065359:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4069580-4069715:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4072498-4072596:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4073328-4073378:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4074445-4074666:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4077748-4077897:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4085253-4085347:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4087929-4088061:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4090546-4090753:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4092312-4092477:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:4092951-4093084:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:4094140-4094312:1:exon

PALLD
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 419612
gene: PALLD
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: palladin isoform X7
translation: MARRLLGAGSATVLSAPEPEEEAASQDPGSPHASVGSPLDGQKEYKVSSCEQRLISEIEYRLERCPVEDPEEEAPWGDVATEDGVAPLFQVKLRHYKIFEGMPVTFTCKVTGSPKPKIYWFKDGKQISPRNQHYSLQSDPDGTCSLRAAAATLEDDGNYTVLAANPQGRVSCTGRLMVQAVNQRGRSPRPSSGHPHGRRPRSRSRDSADESEPIQERFFRPHFLQAPGDLTIQEGRLCRMDCKVSGLPTPDLTWQLDGRPVRPDSAHRMLVRENGVHSLVIEPVTARDAGIYTCVATNRAGQNAFSLELVVAAKEAYKAPVFLEKLQNTGVADGYPVRLECRVSGAPPPQIFWKKENESLTHSTDRVSMHQDPHGYVCLLIQGATKDDAGWYTVSAKNEAGIVSCTARLDVYTQWQQPAQSTKPKRVRPSASRYAALSDQGLDIRAAFQPEASPSHLALSPGLVESEDL
SIO_010081: PALLD
subclass of: SO_0000673
so part of: PALLD
location: join(4072519..4072596,4073328..4073378,4074445..4074666,4077748..4077897,4085253..4085347,4087929..4088061,4090546..4090753,4092312..4092477,4092951..4093084,4094140..4094312)
location: region:4072519-4094312:1
so has part: feature:4072519-4072596:1:exon
so has part: feature:4073328-4073378:1:exon
so has part: feature:4074445-4074666:1:exon
so has part: feature:4077748-4077897:1:exon
so has part: feature:4085253-4085347:1:exon
so has part: feature:4087929-4088061:1:exon
so has part: feature:4090546-4090753:1:exon
so has part: feature:4092312-4092477:1:exon
so has part: feature:4092951-4093084:1:exon
so has part: feature:4094140-4094312:1:exon

XP_032326747.1
type: Protein
SIO_000068: ncbiprotein

position:4072519:1
position: 4072519
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4072519-4072596:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4073328-4073378:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4074445-4074666:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4077748-4077897:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4085253-4085347:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4087929-4088061:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4090546-4090753:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4092312-4092477:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4092951-4093084:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4094140-4094312:1:exon

PALLD
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 419612
gene: PALLD
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: palladin isoform X6
translation: MARRLLGAGSATVLSAPEPEEEAASQEYKVSSCEQRLISEIEYRLERCPVEDPEEEAPWGDVATEDGVAPLFQVKLRHYKIFEGMPVTFTCKVTGSPKPKIYWFKDGKQISPRNQHYSLQSDPDGTCSLRAAAATLEDDGNYTVLAANPQGRVSCTGRLMVQAVNQRGRSPRPSSGHPHGRRPRSRSRDSADESEPIQERFFRPHFLQAPGDLTIQEGRLCRMDCKVSGLPTPDLTWQLDGRPVRPDSAHRMLVRENGVHSLVIEPVTARDAGIYTCVATNRAGQNAFSLELVVAAKEAYKAPVFLEKLQNTGVADGYPVRLECRVSGAPPPQIFWKKENESLTHSTDRVSMHQDPHGYVCLLIQGATKDDAGWYTVSAKNEAGIVSCTARLDVYTQWQQPAQSTKPKRVRPSASRYAALSDQGLDIRAAFQPEASPSHLALSPGLVESEDL
SIO_010081: PALLD
subclass of: SO_0000673
so part of: PALLD
location: join(4072519..4072596,4074445..4074666,4077748..4077897,4085253..4085347,4087929..4088061,4090546..4090753,4092312..4092477,4092951..4093084,4094140..4094312)
location: region:4072519-4094312:1
so has part: feature:4072519-4072596:1:exon
so has part: feature:4074445-4074666:1:exon
so has part: feature:4077748-4077897:1:exon
so has part: feature:4085253-4085347:1:exon
so has part: feature:4087929-4088061:1:exon
so has part: feature:4090546-4090753:1:exon
so has part: feature:4092312-4092477:1:exon
so has part: feature:4092951-4093084:1:exon
so has part: feature:4094140-4094312:1:exon

XP_032326746.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4072519-4072596:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4074445-4074666:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4077748-4077897:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4085253-4085347:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4087929-4088061:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4090546-4090753:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4092312-4092477:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4092951-4093084:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4094140-4094312:1:exon

LOC106729196
type: Gene
subclass of: SO_0000704
RO_0002162: 419612
gene: LOC106729196
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(4077907..4112834)
location: region:4077907-4112834:-1
so has part: feature:4077907-4112834:-1:exon
subclass of: SO_0000011

106729196
type: Gene
SIO_000068: ncbigene

position:4077907:-1
position: 4077907
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4112834:-1
position: 4112834
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4077907-4112834:-1:exon

LOC106729196
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 419612
nc RNA class: lncRNA
gene: LOC106729196
product: uncharacterized LOC106729196, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XR_004316334.1
SIO_010081: LOC106729196
subclass of: SO_0000673
so part of: LOC106729196
location: complement(join(4077907..4078140,4078899..4079507,4081522..4082268))
location: region:4077907-4082268:-1
so has part: feature:4081522-4082268:-1:exon
so has part: feature:4078899-4079507:-1:exon
so has part: feature:4077907-4078140:-1:exon

position:4082268:-1
position: 4082268
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4081522-4082268:-1:exon

position:4081522:-1
position: 4081522
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4078899-4079507:-1:exon

position:4078899:-1
position: 4078899
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4079507:-1
position: 4079507
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4077907-4078140:-1:exon

position:4078140:-1
position: 4078140
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC106729196
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 419612
nc RNA class: lncRNA
gene: LOC106729196
product: uncharacterized LOC106729196, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 13 samples with support for all annotated introns
transcript id: XR_001365535.2
SIO_010081: LOC106729196
subclass of: SO_0000673
so part of: LOC106729196
location: complement(join(4078647..4078993,4079238..4079507,4081522..4082268))
location: region:4078647-4082268:-1
so has part: feature:4081522-4082268:-1:exon
so has part: feature:4079238-4079507:-1:exon
so has part: feature:4078647-4078993:-1:exon

position:4078647:-1
position: 4078647
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4081522-4082268:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4079238-4079507:-1:exon

position:4079238:-1
position: 4079238
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4078647-4078993:-1:exon

position:4078993:-1
position: 4078993
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC106729196
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 419612
nc RNA class: lncRNA
gene: LOC106729196
product: uncharacterized LOC106729196, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 13 samples with support for all annotated introns
transcript id: XR_004316333.1
SIO_010081: LOC106729196
subclass of: SO_0000673
so part of: LOC106729196
location: complement(join(4078647..4079021,4079238..4079507,4081522..4082268))
location: region:4078647-4082268:-1
so has part: feature:4081522-4082268:-1:exon
so has part: feature:4079238-4079507:-1:exon
so has part: feature:4078647-4079021:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4081522-4082268:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4079238-4079507:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4078647-4079021:-1:exon

position:4079021:-1
position: 4079021
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC106729196
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 419612
nc RNA class: lncRNA
gene: LOC106729196
product: uncharacterized LOC106729196, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 20 samples with support for all annotated introns
transcript id: XR_004316332.1
SIO_010081: LOC106729196
subclass of: SO_0000673
so part of: LOC106729196
location: complement(join(4079018..4079507,4081522..4081729,4112664..4112834))
location: region:4079018-4112834:-1
so has part: feature:4112664-4112834:-1:exon
so has part: feature:4081522-4081729:-1:exon
so has part: feature:4079018-4079507:-1:exon

position:4079018:-1
position: 4079018
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4112664-4112834:-1:exon

position:4112664:-1
position: 4112664
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4081522-4081729:-1:exon

position:4081729:-1
position: 4081729
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4079018-4079507:-1:exon

LOC102518267
type: Gene
subclass of: SO_0000704
RO_0002162: 419612
gene: LOC102518267
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: 4107694..4108840
location: region:4107694-4108840:1
so has part: feature:4107694-4108840:1:exon

102518267
type: Gene
SIO_000068: ncbigene

position:4107694:1
position: 4107694
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4108840:1
position: 4108840
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4107694-4108840:1:exon

LOC102518267
type: Exon
subclass of: SO_0000147
RO_0002162: 419612
gene: LOC102518267
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 15 Proteins, and 59% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC102518267
subclass of: SO_0000673
so part of: LOC102518267
location: 4107694..4108840
location: region:4107694-4108840:1
so has part: feature:4107694-4108840:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4107694-4108840:1:exon

CBR4
type: Gene
subclass of: SO_0000704
RO_0002162: 419612
gene: CBR4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(4115157..4132133)
location: region:4115157-4132133:-1
so has part: feature:4115157-4132133:-1:exon
subclass of: SO_0000010

102518024
type: Gene
SIO_000068: ncbigene

position:4115157:-1
position: 4115157
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4132133:-1
position: 4132133
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4115157-4132133:-1:exon

CBR4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 419612
gene: CBR4
product: carbonyl reductase 4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 45 samples with support for all annotated introns
transcript id: XM_032471201.1
SIO_010081: CBR4
subclass of: SO_0000673
so part of: CBR4
location: complement(join(4115157..4117073,4125938..4126072,4128287..4128423,4129701..4129821,4131827..4132133))
location: region:4115157-4132133:-1
so has part: feature:4131827-4132133:-1:exon
so has part: feature:4129701-4129821:-1:exon
so has part: feature:4128287-4128423:-1:exon
so has part: feature:4125938-4126072:-1:exon
so has part: feature:4115157-4117073:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4131827-4132133:-1:exon

position:4131827:-1
position: 4131827
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4129701-4129821:-1:exon

position:4129701:-1
position: 4129701
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4129821:-1
position: 4129821
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4128287-4128423:-1:exon

position:4128287:-1
position: 4128287
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4128423:-1
position: 4128423
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:4125938-4126072:-1:exon

position:4125938:-1
position: 4125938
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4126072:-1
position: 4126072
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:4115157-4117073:-1:exon

position:4117073:-1
position: 4117073
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

CBR4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 419612
gene: CBR4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: carbonyl reductase family member 4
translation: MDKVCAVFGGSRGIGRAVARLMAQRGYQLAIVARNLQGARAAAGDLGGDHLAFSCDVSKEHDVQRTFEEIEKTLGHVNFLVNAAGINRDSLLVRTNTEDMLSQLHTNLLGSMLTCKAAVKTMIKQQRGSIVNVGSVIGLKGNAGQSVYSATKGGLVGFSRALAKEVARKKIRVNVVAPGFVHTDMTKDLKEEHLKKSIPLERFGEPEDVARAVVFLLESPYVTGHVLVVDGGLQLTM
SIO_010081: CBR4
subclass of: SO_0000673
so part of: CBR4
location: complement(join(4116895..4117073,4125938..4126072,4128287..4128423,4129701..4129821,4131827..4131968))
location: region:4116895-4131968:-1
so has part: feature:4131827-4131968:-1:exon
so has part: feature:4129701-4129821:-1:exon
so has part: feature:4128287-4128423:-1:exon
so has part: feature:4125938-4126072:-1:exon
so has part: feature:4116895-4117073:-1:exon

XP_032327092.1
type: Protein
SIO_000068: ncbiprotein

position:4116895:-1
position: 4116895
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4131968:-1
position: 4131968
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4131827-4131968:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4129701-4129821:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4128287-4128423:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4125938-4126072:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4116895-4117073:-1:exon

LOC106729195
type: Gene
subclass of: SO_0000704
RO_0002162: 419612
gene: LOC106729195
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(4145311..4165615)
location: region:4145311-4165615:-1
so has part: feature:4145311-4165615:-1:exon
subclass of: SO_0000011

106729195
type: Gene
SIO_000068: ncbigene

position:4145311:-1
position: 4145311
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4165615:-1
position: 4165615
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4145311-4165615:-1:exon

LOC106729195
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 419612
nc RNA class: lncRNA
gene: LOC106729195
product: uncharacterized LOC106729195, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XR_004316341.1
SIO_010081: LOC106729195
subclass of: SO_0000673
so part of: LOC106729195
location: complement(join(4145311..4147021,4147752..4147933,4148159..4148232,4154761..4154952,4155607..4156433,4156690..4157018))
location: region:4145311-4157018:-1
so has part: feature:4156690-4157018:-1:exon
so has part: feature:4155607-4156433:-1:exon
so has part: feature:4154761-4154952:-1:exon
so has part: feature:4148159-4148232:-1:exon
so has part: feature:4147752-4147933:-1:exon
so has part: feature:4145311-4147021:-1:exon

position:4157018:-1
position: 4157018
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4156690-4157018:-1:exon

position:4156690:-1
position: 4156690
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4155607-4156433:-1:exon

position:4155607:-1
position: 4155607
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4156433:-1
position: 4156433
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4154761-4154952:-1:exon

position:4154761:-1
position: 4154761
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4154952:-1
position: 4154952
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:4148159-4148232:-1:exon

position:4148159:-1
position: 4148159
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4148232:-1
position: 4148232
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:4147752-4147933:-1:exon

position:4147752:-1
position: 4147752
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4147933:-1
position: 4147933
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:4145311-4147021:-1:exon

position:4147021:-1
position: 4147021
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC106729195
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 419612
nc RNA class: lncRNA
gene: LOC106729195
product: uncharacterized LOC106729195, transcript variant X10
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XR_004316344.1
SIO_010081: LOC106729195
subclass of: SO_0000673
so part of: LOC106729195
location: complement(join(4145311..4147021,4147752..4147933,4148159..4148232,4148314..4148592,4154761..4154952,4155607..4157018))
location: region:4145311-4157018:-1
so has part: feature:4155607-4157018:-1:exon
so has part: feature:4154761-4154952:-1:exon
so has part: feature:4148314-4148592:-1:exon
so has part: feature:4148159-4148232:-1:exon
so has part: feature:4147752-4147933:-1:exon
so has part: feature:4145311-4147021:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4155607-4157018:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4154761-4154952:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4148314-4148592:-1:exon

position:4148314:-1
position: 4148314
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4148592:-1
position: 4148592
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:4148159-4148232:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4147752-4147933:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4145311-4147021:-1:exon

LOC106729195
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 419612
nc RNA class: lncRNA
gene: LOC106729195
product: uncharacterized LOC106729195, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XR_004316339.1
SIO_010081: LOC106729195
subclass of: SO_0000673
so part of: LOC106729195
location: complement(join(4145311..4147021,4147752..4147933,4148159..4148592,4154761..4154952,4155607..4157018))
location: region:4145311-4157018:-1
so has part: feature:4155607-4157018:-1:exon
so has part: feature:4154761-4154952:-1:exon
so has part: feature:4148159-4148592:-1:exon
so has part: feature:4147752-4147933:-1:exon
so has part: feature:4145311-4147021:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4155607-4157018:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4154761-4154952:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4148159-4148592:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4147752-4147933:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4145311-4147021:-1:exon

LOC106729195
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 419612
nc RNA class: lncRNA
gene: LOC106729195
product: uncharacterized LOC106729195, transcript variant X9
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XR_004316343.1
SIO_010081: LOC106729195
subclass of: SO_0000673
so part of: LOC106729195
location: complement(join(4145311..4147021,4147752..4147933,4148100..4148592,4154761..4154952,4155607..4157018))
location: region:4145311-4157018:-1
so has part: feature:4155607-4157018:-1:exon
so has part: feature:4154761-4154952:-1:exon
so has part: feature:4148100-4148592:-1:exon
so has part: feature:4147752-4147933:-1:exon
so has part: feature:4145311-4147021:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4155607-4157018:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4154761-4154952:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4148100-4148592:-1:exon

position:4148100:-1
position: 4148100
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:4147752-4147933:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4145311-4147021:-1:exon

LOC106729195
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 419612
nc RNA class: lncRNA
gene: LOC106729195
product: uncharacterized LOC106729195, transcript variant X7
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XR_004316342.1
SIO_010081: LOC106729195
subclass of: SO_0000673
so part of: LOC106729195
location: complement(join(4145636..4147021,4147752..4147933,4148159..4148232,4154761..4154952,4165544..4165615))
location: region:4145636-4165615:-1
so has part: feature:4165544-4165615:-1:exon
so has part: feature:4154761-4154952:-1:exon
so has part: feature:4148159-4148232:-1:exon
so has part: feature:4147752-4147933:-1:exon
so has part: feature:4145636-4147021:-1:exon

position:4145636:-1
position: 4145636
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4165544-4165615:-1:exon

position:4165544:-1
position: 4165544
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4154761-4154952:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4148159-4148232:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4147752-4147933:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4145636-4147021:-1:exon

LOC106729195
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 419612
nc RNA class: lncRNA
gene: LOC106729195
product: uncharacterized LOC106729195, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 25 samples with support for all annotated introns
transcript id: XR_001365534.2
SIO_010081: LOC106729195
subclass of: SO_0000673
so part of: LOC106729195
location: complement(join(4145636..4147021,4147752..4147933,4148159..4148232,4154761..4154952,4157165..4157549))
location: region:4145636-4157549:-1
so has part: feature:4157165-4157549:-1:exon
so has part: feature:4154761-4154952:-1:exon
so has part: feature:4148159-4148232:-1:exon
so has part: feature:4147752-4147933:-1:exon
so has part: feature:4145636-4147021:-1:exon

position:4157549:-1
position: 4157549
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4157165-4157549:-1:exon

position:4157165:-1
position: 4157165
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4154761-4154952:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4148159-4148232:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4147752-4147933:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4145636-4147021:-1:exon

LOC106729195
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 419612
nc RNA class: lncRNA
gene: LOC106729195
product: uncharacterized LOC106729195, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 16 samples with support for all annotated introns
transcript id: XR_004316338.1
SIO_010081: LOC106729195
subclass of: SO_0000673
so part of: LOC106729195
location: complement(join(4145636..4147021,4147752..4147933,4148159..4148232,4154761..4154952,4155607..4157018))
location: region:4145636-4157018:-1
so has part: feature:4155607-4157018:-1:exon
so has part: feature:4154761-4154952:-1:exon
so has part: feature:4148159-4148232:-1:exon
so has part: feature:4147752-4147933:-1:exon
so has part: feature:4145636-4147021:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4155607-4157018:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4154761-4154952:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4148159-4148232:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4147752-4147933:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4145636-4147021:-1:exon

LOC106729195
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 419612
nc RNA class: lncRNA
gene: LOC106729195
product: uncharacterized LOC106729195, transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
transcript id: XR_001365533.2
SIO_010081: LOC106729195
subclass of: SO_0000673
so part of: LOC106729195
location: complement(join(4145636..4147021,4147752..4147933,4148159..4148232,4154761..4154952,4155358..4155434))
location: region:4145636-4155434:-1
so has part: feature:4155358-4155434:-1:exon
so has part: feature:4154761-4154952:-1:exon
so has part: feature:4148159-4148232:-1:exon
so has part: feature:4147752-4147933:-1:exon
so has part: feature:4145636-4147021:-1:exon

position:4155434:-1
position: 4155434
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4155358-4155434:-1:exon

position:4155358:-1
position: 4155358
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4154761-4154952:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4148159-4148232:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4147752-4147933:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4145636-4147021:-1:exon

LOC106729195
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 419612
nc RNA class: lncRNA
gene: LOC106729195
product: uncharacterized LOC106729195, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XR_004316340.1
SIO_010081: LOC106729195
subclass of: SO_0000673
so part of: LOC106729195
location: complement(join(4145636..4147021,4147752..4147933,4148159..4148232,4154761..4154952,4155105..4155342))
location: region:4145636-4155342:-1
so has part: feature:4155105-4155342:-1:exon
so has part: feature:4154761-4154952:-1:exon
so has part: feature:4148159-4148232:-1:exon
so has part: feature:4147752-4147933:-1:exon
so has part: feature:4145636-4147021:-1:exon

position:4155342:-1
position: 4155342
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4155105-4155342:-1:exon

position:4155105:-1
position: 4155105
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4154761-4154952:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4148159-4148232:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4147752-4147933:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4145636-4147021:-1:exon

LOC106729195
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 419612
nc RNA class: lncRNA
gene: LOC106729195
product: uncharacterized LOC106729195, transcript variant X8
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XR_001365532.2
SIO_010081: LOC106729195
subclass of: SO_0000673
so part of: LOC106729195
location: complement(join(4145636..4147021,4147752..4147933,4148159..4148592,4148697..4150409))
location: region:4145636-4150409:-1
so has part: feature:4148697-4150409:-1:exon
so has part: feature:4148159-4148592:-1:exon
so has part: feature:4147752-4147933:-1:exon
so has part: feature:4145636-4147021:-1:exon

position:4150409:-1
position: 4150409
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4148697-4150409:-1:exon

position:4148697:-1
position: 4148697
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4148159-4148592:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4147752-4147933:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4145636-4147021:-1:exon

SH3RF1
type: Gene
subclass of: SO_0000704
RO_0002162: 419612
gene: SH3RF1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(4175194..4283225)
location: region:4175194-4283225:-1
so has part: feature:4175194-4283225:-1:exon
subclass of: SO_0000010

102517779
type: Gene
SIO_000068: ncbigene

position:4175194:-1
position: 4175194
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4283225:-1
position: 4283225
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4175194-4283225:-1:exon

SH3RF1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 419612
gene: SH3RF1
product: SH3 domain containing ring finger 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 35 samples with support for all annotated introns
transcript id: XM_032471010.1
SIO_010081: SH3RF1
subclass of: SO_0000673
so part of: SH3RF1
location: complement(join(4175194..4177199,4183035..4183321,4188254..4188495,4189509..4189765,4192560..4192730,4193969..4194105,4201327..4201437,4205421..4205708,4216065..4216160,4216944..4217219,4281064..4281551,4283088..4283225))
location: region:4175194-4283225:-1
so has part: feature:4283088-4283225:-1:exon
so has part: feature:4281064-4281551:-1:exon
so has part: feature:4216944-4217219:-1:exon
so has part: feature:4216065-4216160:-1:exon
so has part: feature:4205421-4205708:-1:exon
so has part: feature:4201327-4201437:-1:exon
so has part: feature:4193969-4194105:-1:exon
so has part: feature:4192560-4192730:-1:exon
so has part: feature:4189509-4189765:-1:exon
so has part: feature:4188254-4188495:-1:exon
so has part: feature:4183035-4183321:-1:exon
so has part: feature:4175194-4177199:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4283088-4283225:-1:exon

position:4283088:-1
position: 4283088
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4281064-4281551:-1:exon

position:4281064:-1
position: 4281064
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4281551:-1
position: 4281551
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4216944-4217219:-1:exon

position:4216944:-1
position: 4216944
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4217219:-1
position: 4217219
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:4216065-4216160:-1:exon

position:4216065:-1
position: 4216065
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4216160:-1
position: 4216160
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:4205421-4205708:-1:exon

position:4205421:-1
position: 4205421
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4205708:-1
position: 4205708
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:4201327-4201437:-1:exon

position:4201327:-1
position: 4201327
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4201437:-1
position: 4201437
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:4193969-4194105:-1:exon

position:4193969:-1
position: 4193969
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4194105:-1
position: 4194105
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:4192560-4192730:-1:exon

position:4192560:-1
position: 4192560
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4192730:-1
position: 4192730
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:4189509-4189765:-1:exon

position:4189509:-1
position: 4189509
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4189765:-1
position: 4189765
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:4188254-4188495:-1:exon

position:4188254:-1
position: 4188254
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4188495:-1
position: 4188495
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:4183035-4183321:-1:exon

position:4183035:-1
position: 4183035
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4183321:-1
position: 4183321
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:4175194-4177199:-1:exon

position:4177199:-1
position: 4177199
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

SH3RF1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 419612
gene: SH3RF1
product: SH3 domain containing ring finger 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 28 samples with support for all annotated introns
transcript id: XM_032471011.1
SIO_010081: SH3RF1
subclass of: SO_0000673
so part of: SH3RF1
location: complement(join(4175194..4177199,4183035..4183321,4188254..4188495,4189509..4189765,4192560..4192730,4193969..4194105,4201327..4201437,4205421..4205708,4216065..4216160,4216944..4217219,4281064..4281546,4283088..4283218))
location: region:4175194-4283218:-1
so has part: feature:4283088-4283218:-1:exon
so has part: feature:4281064-4281546:-1:exon
so has part: feature:4216944-4217219:-1:exon
so has part: feature:4216065-4216160:-1:exon
so has part: feature:4205421-4205708:-1:exon
so has part: feature:4201327-4201437:-1:exon
so has part: feature:4193969-4194105:-1:exon
so has part: feature:4192560-4192730:-1:exon
so has part: feature:4189509-4189765:-1:exon
so has part: feature:4188254-4188495:-1:exon
so has part: feature:4183035-4183321:-1:exon
so has part: feature:4175194-4177199:-1:exon

position:4283218:-1
position: 4283218
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4283088-4283218:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4281064-4281546:-1:exon

position:4281546:-1
position: 4281546
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4216944-4217219:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4216065-4216160:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4205421-4205708:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4201327-4201437:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4193969-4194105:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4192560-4192730:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4189509-4189765:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4188254-4188495:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:4183035-4183321:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:4175194-4177199:-1:exon

SH3RF1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 419612
gene: SH3RF1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: E3 ubiquitin-protein ligase SH3RF1
translation: MDESALLDLLECPVCLERLDASAKVLPCQHTFCKRCLLGIVGSRNELRCPECRTLVGAGVEELPSNILLVRLLDGIKQRPCKAGPAAGGGTNCANTARAQSSSGASCGSKDLQSSQGGPQPRVQAWSPPARGTPQLPCAKALYNYEGKEPGDLKFSKGDIIILRRQVDENWYHGEVNGVHGFFPTNFVQIIKPLPQPPPQCKALYDFEVKDKEADKDCLPFAKDDVLTVIRRVDVNWAEGMLADRIGIFPISYVEFNSAAKQLIEWDQPPGPGTGAGEGPSATAPKQPDAKKNTRKRHSFTSLTTAGKSTHAGQQRHSMDISPPVLISSSNPAAAARIGELAGLSCSAPSQVHISTTGLIVTPPPSSPVTASPAFTFPSEGPYPAALGTVNPPLPPPPLQAATPAGAAVGTGTRPAAGPTDQTAHLRPQTRPSVYVAVYPYTPRKEDELELRKGEMFLVFERCQDGWFKGTSMHTSKTGVFPGNYVAPVTRTVTSASQGKVPVAAGQAGRGVTTGSPSTAGGPAQQLQGNGVAGGPGVVPTAVVSAAHLQTSPPAKVLMHMSGQMTVSQARSVVRTASAHGQERPMAAVTPIQAQSAVGLPHHPPAPMAMVGPGGLGRVGAALAPPNIPAASLETALPGLPTSPDGSSAVKPDKDGKKEKKGLLKLLSGASTKRRPRGSPPASPTLDSEPGAEPGSPCACPGPCDADGPALDPGLQRRAGSLDSAAPVAPPPRQPCSSLVPAAGEARPVVCERHRVVVSYPPQSEAELELKEGDIVFVHKKREDGWFKGTLQRNGKTGLFPGSFVENI
SIO_010081: SH3RF1
subclass of: SO_0000673
so part of: SH3RF1
location: complement(join(4177031..4177199,4183035..4183321,4188254..4188495,4189509..4189765,4192560..4192730,4193969..4194105,4201327..4201437,4205421..4205708,4216065..4216160,4216944..4217219,4281064..4281456))
location: region:4177031-4281456:-1
so has part: feature:4281064-4281456:-1:exon
so has part: feature:4216944-4217219:-1:exon
so has part: feature:4216065-4216160:-1:exon
so has part: feature:4205421-4205708:-1:exon
so has part: feature:4201327-4201437:-1:exon
so has part: feature:4193969-4194105:-1:exon
so has part: feature:4192560-4192730:-1:exon
so has part: feature:4189509-4189765:-1:exon
so has part: feature:4188254-4188495:-1:exon
so has part: feature:4183035-4183321:-1:exon
so has part: feature:4177031-4177199:-1:exon

XP_032326901.1
type: Protein
SIO_000068: ncbiprotein

position:4177031:-1
position: 4177031
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4281456:-1
position: 4281456
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4281064-4281456:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4216944-4217219:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4216065-4216160:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4205421-4205708:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4201327-4201437:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4193969-4194105:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4192560-4192730:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4189509-4189765:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4188254-4188495:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4183035-4183321:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:4177031-4177199:-1:exon

SH3RF1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 419612
gene: SH3RF1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: E3 ubiquitin-protein ligase SH3RF1
translation: MDESALLDLLECPVCLERLDASAKVLPCQHTFCKRCLLGIVGSRNELRCPECRTLVGAGVEELPSNILLVRLLDGIKQRPCKAGPAAGGGTNCANTARAQSSSGASCGSKDLQSSQGGPQPRVQAWSPPARGTPQLPCAKALYNYEGKEPGDLKFSKGDIIILRRQVDENWYHGEVNGVHGFFPTNFVQIIKPLPQPPPQCKALYDFEVKDKEADKDCLPFAKDDVLTVIRRVDVNWAEGMLADRIGIFPISYVEFNSAAKQLIEWDQPPGPGTGAGEGPSATAPKQPDAKKNTRKRHSFTSLTTAGKSTHAGQQRHSMDISPPVLISSSNPAAAARIGELAGLSCSAPSQVHISTTGLIVTPPPSSPVTASPAFTFPSEGPYPAALGTVNPPLPPPPLQAATPAGAAVGTGTRPAAGPTDQTAHLRPQTRPSVYVAVYPYTPRKEDELELRKGEMFLVFERCQDGWFKGTSMHTSKTGVFPGNYVAPVTRTVTSASQGKVPVAAGQAGRGVTTGSPSTAGGPAQQLQGNGVAGGPGVVPTAVVSAAHLQTSPPAKVLMHMSGQMTVSQARSVVRTASAHGQERPMAAVTPIQAQSAVGLPHHPPAPMAMVGPGGLGRVGAALAPPNIPAASLETALPGLPTSPDGSSAVKPDKDGKKEKKGLLKLLSGASTKRRPRGSPPASPTLDSEPGAEPGSPCACPGPCDADGPALDPGLQRRAGSLDSAAPVAPPPRQPCSSLVPAAGEARPVVCERHRVVVSYPPQSEAELELKEGDIVFVHKKREDGWFKGTLQRNGKTGLFPGSFVENI
SIO_010081: SH3RF1
subclass of: SO_0000673
so part of: SH3RF1
location: complement(join(4177031..4177199,4183035..4183321,4188254..4188495,4189509..4189765,4192560..4192730,4193969..4194105,4201327..4201437,4205421..4205708,4216065..4216160,4216944..4217219,4281064..4281456))
location: region:4177031-4281456:-1
so has part: feature:4281064-4281456:-1:exon
so has part: feature:4216944-4217219:-1:exon
so has part: feature:4216065-4216160:-1:exon
so has part: feature:4205421-4205708:-1:exon
so has part: feature:4201327-4201437:-1:exon
so has part: feature:4193969-4194105:-1:exon
so has part: feature:4192560-4192730:-1:exon
so has part: feature:4189509-4189765:-1:exon
so has part: feature:4188254-4188495:-1:exon
so has part: feature:4183035-4183321:-1:exon
so has part: feature:4177031-4177199:-1:exon

XP_032326902.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4281064-4281456:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4216944-4217219:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4216065-4216160:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4205421-4205708:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4201327-4201437:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4193969-4194105:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4192560-4192730:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4189509-4189765:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4188254-4188495:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4183035-4183321:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:4177031-4177199:-1:exon

LOC116660788
type: Gene
subclass of: SO_0000704
RO_0002162: 419612
gene: LOC116660788
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(4201447..4205414)
location: region:4201447-4205414:-1
so has part: feature:4201447-4205414:-1:exon
subclass of: SO_0000010

116660788
type: Gene
SIO_000068: ncbigene

position:4201447:-1
position: 4201447
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4205414:-1
position: 4205414
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4201447-4205414:-1:exon

LOC116660788
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 419612
gene: LOC116660788
product: proline-rich extensin-like protein EPR1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_032471013.1
SIO_010081: LOC116660788
subclass of: SO_0000673
so part of: LOC116660788
location: complement(join(4201447..4205121,4205200..4205414))
location: region:4201447-4205414:-1
so has part: feature:4205200-4205414:-1:exon
so has part: feature:4201447-4205121:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4205200-4205414:-1:exon

position:4205200:-1
position: 4205200
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4201447-4205121:-1:exon

position:4205121:-1
position: 4205121
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC116660788
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 419612
gene: LOC116660788
product: proline-rich extensin-like protein EPR1, transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_032471017.1
SIO_010081: LOC116660788
subclass of: SO_0000673
so part of: LOC116660788
location: complement(join(4201447..4204216,4204699..4204808,4204855..4204949,4204981..4205414))
location: region:4201447-4205414:-1
so has part: feature:4204981-4205414:-1:exon
so has part: feature:4204855-4204949:-1:exon
so has part: feature:4204699-4204808:-1:exon
so has part: feature:4201447-4204216:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4204981-4205414:-1:exon

position:4204981:-1
position: 4204981
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4204855-4204949:-1:exon

position:4204855:-1
position: 4204855
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4204949:-1
position: 4204949
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4204699-4204808:-1:exon

position:4204699:-1
position: 4204699
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4204808:-1
position: 4204808
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:4201447-4204216:-1:exon

position:4204216:-1
position: 4204216
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC116660788
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 419612
gene: LOC116660788
product: proline-rich extensin-like protein EPR1, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_032471014.1
SIO_010081: LOC116660788
subclass of: SO_0000673
so part of: LOC116660788
location: complement(join(4201447..4204808,4204887..4205414))
location: region:4201447-4205414:-1
so has part: feature:4204887-4205414:-1:exon
so has part: feature:4201447-4204808:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4204887-4205414:-1:exon

position:4204887:-1
position: 4204887
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4201447-4204808:-1:exon

LOC116660788
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 419612
gene: LOC116660788
product: proline-rich extensin-like protein EPR1, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_032471016.1
SIO_010081: LOC116660788
subclass of: SO_0000673
so part of: LOC116660788
location: complement(join(4201447..4204480,4204511..4204698,4204761..4205414))
location: region:4201447-4205414:-1
so has part: feature:4204761-4205414:-1:exon
so has part: feature:4204511-4204698:-1:exon
so has part: feature:4201447-4204480:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4204761-4205414:-1:exon

position:4204761:-1
position: 4204761
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4204511-4204698:-1:exon

position:4204511:-1
position: 4204511
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4204698:-1
position: 4204698
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4201447-4204480:-1:exon

position:4204480:-1
position: 4204480
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC116660788
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 419612
gene: LOC116660788
product: proline-rich extensin-like protein EPR1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_032471012.1
SIO_010081: LOC116660788
subclass of: SO_0000673
so part of: LOC116660788
location: complement(join(4201447..4204480,4204511..4205414))
location: region:4201447-4205414:-1
so has part: feature:4204511-4205414:-1:exon
so has part: feature:4201447-4204480:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4204511-4205414:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4201447-4204480:-1:exon

LOC116660788
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 419612
gene: LOC116660788
product: proline-rich extensin-like protein EPR1, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_032471015.1
SIO_010081: LOC116660788
subclass of: SO_0000673
so part of: LOC116660788
location: complement(join(4201447..4204263,4204387..4205414))
location: region:4201447-4205414:-1
so has part: feature:4204387-4205414:-1:exon
so has part: feature:4201447-4204263:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4204387-4205414:-1:exon

position:4204387:-1
position: 4204387
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4201447-4204263:-1:exon

position:4204263:-1
position: 4204263
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC116660788
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 419612
gene: LOC116660788
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: extensin-like isoform X6
translation: MPRLRYPCLRYTPSQVRPVSGTPRLRYTPSQVPPSQVPPSQVYPISGTPCLRYTPSQVPPSQVRPVSGTPHLRYPRLRYAPSQVPPSQVHPISGMPRLRYPCLRYTPSQVRPVSGTPRLRYTPSQVPPVSGTPHLRYPRLRYAPSQVHPISGTPISGTPRLRYPRLRYAHLGYPPPHPRTRPGHLLRIVHPWPGSGSSRVSTQDPAATSKRGSRNDKTTQVKLVASSATSAFQSLPTC
SIO_010081: LOC116660788
subclass of: SO_0000673
so part of: LOC116660788
location: complement(join(4203969..4204216,4204699..4204808,4204855..4204949,4204981..4205244))
location: region:4203969-4205244:-1
so has part: feature:4204981-4205244:-1:exon
so has part: feature:4204855-4204949:-1:exon
so has part: feature:4204699-4204808:-1:exon
so has part: feature:4203969-4204216:-1:exon

XP_032326908.1
type: Protein
SIO_000068: ncbiprotein

position:4203969:-1
position: 4203969
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4205244:-1
position: 4205244
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4204981-4205244:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4204855-4204949:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4204699-4204808:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4203969-4204216:-1:exon

LOC116660788
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 419612
gene: LOC116660788
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: proline-rich extensin-like protein EPR1 isoform X2
translation: MPRLRYPCLRYTPSQVYPISGTPCLRYTPSQVPPSQVRPVSGTPHLRYPRLRYAPSQVPPSQVCLVSGTPVSGTPHLRYAPSQVPLSQVHPVSGTPRLRYPPSQVHPVSGTPVSGTPISGIPHLRYPLSQVHPISGTPVSGTPRLRYTPSQVPPSQVSPISGTPRLRYAPFQVRPVSGTPVSGTPVSGTPRLRYPRLRYAPSQVPPSQVCPISGTHHLRYPHLRYPHLRYAPSQVPPSQVRPVSGTPISGMPHLRYAPSQVPPSQVPPSQVPPSQVHPISGTPRLRYAPSQVPPSQVPPSQVHPVSGTPHLRYPRLRYAPSQVPPSQVRPSRVPPAPPQDPPRSSAEDSASLAGVRQLEGVHPGPCGHFQKGEQK
SIO_010081: LOC116660788
subclass of: SO_0000673
so part of: LOC116660788
location: complement(join(4204039..4205121,4205200..4205244))
location: region:4204039-4205244:-1
so has part: feature:4205200-4205244:-1:exon
so has part: feature:4204039-4205121:-1:exon

XP_032326904.1
type: Protein
SIO_000068: ncbiprotein

position:4204039:-1
position: 4204039
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4205200-4205244:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4204039-4205121:-1:exon

LOC116660788
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 419612
gene: LOC116660788
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: vegetative cell wall protein gp1-like isoform X3
translation: MPRLRYPCLRYTPSQVRPVSGTPRLRYTPSQVPPSQVPPSQVYPISGTPCLRYTPSQVPPSQVRPVSGTPHLRYPRLRYAPSQVPPSQVCLVSGTPVSGTPHLRYAPSQVPLSQVHPVSGIPHLRYPLSQVHPISGTPVSGTPRLRYTPSQVPPSQVSPISGTPRLRYAPFQVRPVSGTPVSGTPVSGTPRLRYPRLRYAPSQVPPSQVCPISGTHHLRYPHLRYPHLRYAPSQVPPSQVRPVSGTPISGMPHLRYAPSQVPPSQVPPSQVPPSQVHPISGTPRLRYAPSQVPPSQVPPSQVHPVSGTPHLRYPRLRYAPSQVPPSQVRPSRVPPAPPQDPPRSSAEDSASLAGVRQLEGVHPGPCGHFQKGEQK
SIO_010081: LOC116660788
subclass of: SO_0000673
so part of: LOC116660788
location: complement(join(4204039..4204808,4204887..4205244))
location: region:4204039-4205244:-1
so has part: feature:4204887-4205244:-1:exon
so has part: feature:4204039-4204808:-1:exon

XP_032326905.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4204887-4205244:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4204039-4204808:-1:exon

LOC116660788
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 419612
gene: LOC116660788
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: vegetative cell wall protein gp1-like isoform X1
translation: MPRLRYPCLRYTPSQVRPVSGTPRLRYTPSQVPPSQVPPSQVYPISGTPCLRYTPSQVPPSQVRPVSGTPHLRYPRLRYAPSQVPPSQVCLVSGTPVSGTPHLRYAPSQVPLSQVHPVSGTPRLRYPPSQVHPVSGTPVSGTPISGIPHLRYPLSQVHPISGTPVSGTPRLRYTPSQVPPSQVSPISGTPRLRYAPFQVRPVSGTPVSGTPVSGTPRLRYPRLRYAPSQVPPSQVCPISGTHHLRYAPSQVPPSQVRPVSGTPISGMPHLRYAPSQVPPSQVPPSQVPPSQVHPISGTPRLRYAPSQVPPSQVPPSQVHPVSGTPHLRYPRLRYAPSQVPPSQVRPSRVPPAPPQDPPRSSAEDSASLAGVRQLEGVHPGPCGHFQKGEQK
SIO_010081: LOC116660788
subclass of: SO_0000673
so part of: LOC116660788
location: complement(join(4204039..4204480,4204511..4205244))
location: region:4204039-4205244:-1
so has part: feature:4204511-4205244:-1:exon
so has part: feature:4204039-4204480:-1:exon

XP_032326903.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4204511-4205244:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4204039-4204480:-1:exon

LOC116660788
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 419612
gene: LOC116660788
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: vegetative cell wall protein gp1-like isoform X4
translation: MPRLRYPCLRYTPSQVRPVSGTPRLRYTPSQVPPSQVPPSQVYPISGTPCLRYTPSQVPPSQVRPVSGTPHLRYPRLRYAPSQVPPSQVCLVSGTPVSGTPHLRYAPSQVPLSQVHPVSGTPRLRYPPSQVHPVSGTPVSGTPISGIPHLRYPLSQVHPISGTPVSGTPRLRYTPSQVPPSQVSPISGTPRLRYAPFQVRPVSGTPVSGTPVSGTPRLRYPRLRYAPSQVPPSQVCPISGTHHLRYPHLRYPHLRYAPSQVPPSQVRPVSGTPISGMPHLRYAPSQVHPVSGTPHLRYPRLRYAPSQVPPSQVRPSRVPPAPPQDPPRSSAEDSASLAGVRQLEGVHPGPCGHFQKGEQK
SIO_010081: LOC116660788
subclass of: SO_0000673
so part of: LOC116660788
location: complement(join(4204039..4204263,4204387..4205244))
location: region:4204039-4205244:-1
so has part: feature:4204387-4205244:-1:exon
so has part: feature:4204039-4204263:-1:exon

XP_032326906.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4204387-4205244:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4204039-4204263:-1:exon

LOC116660788
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 419612
gene: LOC116660788
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: vegetative cell wall protein gp1-like isoform X5
translation: MPRLRYPCLRYTPSQVRPVSGTPRLRYTPSQVPPSQVPPSQVYPISGTPCLRYTPSQVPPSQVRPVSGTPHLRYPRLRYAPSQVPPSQVCLVSGTPVSGTPHLRYAPSQVPLSQVHPVSGTPRLRYPPSQVHPVSGTPVSGTPISGIPHLRYPLSQVHPISGKPHLRYAPSQVCPVSGTPRLRYPRLRYPRLRYAPSQVPPSQVRPVSGTPISGMPHLRYAPSQVRPVSGTPVSGTPRLRYPHLRYAPSQVRTISGTPISGTPISGTPISGTPHLRYTPSQVRPVSGTPVSGTPISGTPRLRYAPSQVPPSQVRPVSGTPVSGTPISGTPRPTPGPAQVIC
SIO_010081: LOC116660788
subclass of: SO_0000673
so part of: LOC116660788
location: complement(join(4204127..4204480,4204511..4204698,4204761..4205244))
location: region:4204127-4205244:-1
so has part: feature:4204761-4205244:-1:exon
so has part: feature:4204511-4204698:-1:exon
so has part: feature:4204127-4204480:-1:exon

XP_032326907.1
type: Protein
SIO_000068: ncbiprotein

position:4204127:-1
position: 4204127
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4204761-4205244:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4204511-4204698:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4204127-4204480:-1:exon

NEK1
type: Gene
subclass of: SO_0000704
RO_0002162: 419612
gene: NEK1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(4322782..4412118)
location: region:4322782-4412118:-1
so has part: feature:4322782-4412118:-1:exon
subclass of: SO_0000010

102517527
type: Gene
SIO_000068: ncbigene

position:4322782:-1
position: 4322782
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4412118:-1
position: 4412118
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4322782-4412118:-1:exon

NEK1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 419612
gene: NEK1
product: NIMA related kinase 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 27 samples with support for all annotated introns
transcript id: XM_032470760.1
SIO_010081: NEK1
subclass of: SO_0000673
so part of: NEK1
location: complement(join(4322782..4324050,4330294..4330426,4330593..4330723,4331641..4331831,4333976..4334127,4337734..4337981,4338924..4339012,4344093..4344213,4346591..4346767,4356070..4356222,4358905..4359130,4359211..4359276,4361134..4361265,4370618..4370713,4371350..4371427,4371861..4371944,4372361..4372444,4382095..4382197,4384178..4384341,4384936..4385010,4385144..4385191,4385285..4385344,4385582..4385641,4389342..4389493,4392171..4392231,4396344..4396544,4397079..4397133,4397655..4397741,4397872..4397939,4400056..4400139,4403293..4403390,4405892..4405988,4406400..4406544,4411972..4412118))
location: region:4322782-4412118:-1
so has part: feature:4411972-4412118:-1:exon
so has part: feature:4406400-4406544:-1:exon
so has part: feature:4405892-4405988:-1:exon
so has part: feature:4403293-4403390:-1:exon
so has part: feature:4400056-4400139:-1:exon
so has part: feature:4397872-4397939:-1:exon
so has part: feature:4397655-4397741:-1:exon
so has part: feature:4397079-4397133:-1:exon
so has part: feature:4396344-4396544:-1:exon
so has part: feature:4392171-4392231:-1:exon
so has part: feature:4389342-4389493:-1:exon
so has part: feature:4385582-4385641:-1:exon
so has part: feature:4385285-4385344:-1:exon
so has part: feature:4385144-4385191:-1:exon
so has part: feature:4384936-4385010:-1:exon
so has part: feature:4384178-4384341:-1:exon
so has part: feature:4382095-4382197:-1:exon
so has part: feature:4372361-4372444:-1:exon
so has part: feature:4371861-4371944:-1:exon
so has part: feature:4371350-4371427:-1:exon
so has part: feature:4370618-4370713:-1:exon
so has part: feature:4361134-4361265:-1:exon
so has part: feature:4359211-4359276:-1:exon
so has part: feature:4358905-4359130:-1:exon
so has part: feature:4356070-4356222:-1:exon
so has part: feature:4346591-4346767:-1:exon
so has part: feature:4344093-4344213:-1:exon
so has part: feature:4338924-4339012:-1:exon
so has part: feature:4337734-4337981:-1:exon
so has part: feature:4333976-4334127:-1:exon
so has part: feature:4331641-4331831:-1:exon
so has part: feature:4330593-4330723:-1:exon
so has part: feature:4330294-4330426:-1:exon
so has part: feature:4322782-4324050:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4411972-4412118:-1:exon

position:4411972:-1
position: 4411972
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4406400-4406544:-1:exon

position:4406400:-1
position: 4406400
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4406544:-1
position: 4406544
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4405892-4405988:-1:exon

position:4405892:-1
position: 4405892
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4405988:-1
position: 4405988
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:4403293-4403390:-1:exon

position:4403293:-1
position: 4403293
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4403390:-1
position: 4403390
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:4400056-4400139:-1:exon

position:4400056:-1
position: 4400056
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4400139:-1
position: 4400139
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:4397872-4397939:-1:exon

position:4397872:-1
position: 4397872
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4397939:-1
position: 4397939
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:4397655-4397741:-1:exon

position:4397655:-1
position: 4397655
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4397741:-1
position: 4397741
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:4397079-4397133:-1:exon

position:4397079:-1
position: 4397079
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4397133:-1
position: 4397133
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:4396344-4396544:-1:exon

position:4396344:-1
position: 4396344
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4396544:-1
position: 4396544
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:4392171-4392231:-1:exon

position:4392171:-1
position: 4392171
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4392231:-1
position: 4392231
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:4389342-4389493:-1:exon

position:4389342:-1
position: 4389342
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4389493:-1
position: 4389493
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:4385582-4385641:-1:exon

position:4385582:-1
position: 4385582
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4385641:-1
position: 4385641
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:4385285-4385344:-1:exon

position:4385285:-1
position: 4385285
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4385344:-1
position: 4385344
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:4385144-4385191:-1:exon

position:4385144:-1
position: 4385144
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4385191:-1
position: 4385191
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:4384936-4385010:-1:exon

position:4384936:-1
position: 4384936
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4385010:-1
position: 4385010
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:4384178-4384341:-1:exon

position:4384178:-1
position: 4384178
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4384341:-1
position: 4384341
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:4382095-4382197:-1:exon

position:4382095:-1
position: 4382095
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4382197:-1
position: 4382197
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:4372361-4372444:-1:exon

position:4372361:-1
position: 4372361
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4372444:-1
position: 4372444
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:4371861-4371944:-1:exon

position:4371861:-1
position: 4371861
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4371944:-1
position: 4371944
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:4371350-4371427:-1:exon

position:4371350:-1
position: 4371350
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4371427:-1
position: 4371427
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:4370618-4370713:-1:exon

position:4370618:-1
position: 4370618
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4370713:-1
position: 4370713
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:4361134-4361265:-1:exon

position:4361134:-1
position: 4361134
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4361265:-1
position: 4361265
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:4359211-4359276:-1:exon

position:4359211:-1
position: 4359211
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4359276:-1
position: 4359276
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:4358905-4359130:-1:exon

position:4358905:-1
position: 4358905
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4359130:-1
position: 4359130
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:4356070-4356222:-1:exon

position:4356070:-1
position: 4356070
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4356222:-1
position: 4356222
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 26
SIO_000628: feature:4346591-4346767:-1:exon

position:4346591:-1
position: 4346591
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4346767:-1
position: 4346767
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 27
SIO_000628: feature:4344093-4344213:-1:exon

position:4344093:-1
position: 4344093
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4344213:-1
position: 4344213
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 28
SIO_000628: feature:4338924-4339012:-1:exon

position:4338924:-1
position: 4338924
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4339012:-1
position: 4339012
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 29
SIO_000628: feature:4337734-4337981:-1:exon

position:4337734:-1
position: 4337734
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4337981:-1
position: 4337981
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 30
SIO_000628: feature:4333976-4334127:-1:exon

position:4333976:-1
position: 4333976
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4334127:-1
position: 4334127
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 31
SIO_000628: feature:4331641-4331831:-1:exon

position:4331641:-1
position: 4331641
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4331831:-1
position: 4331831
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 32
SIO_000628: feature:4330593-4330723:-1:exon

position:4330593:-1
position: 4330593
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4330723:-1
position: 4330723
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 33
SIO_000628: feature:4330294-4330426:-1:exon

position:4330294:-1
position: 4330294
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4330426:-1
position: 4330426
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 34
SIO_000628: feature:4322782-4324050:-1:exon

position:4324050:-1
position: 4324050
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

NEK1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 419612
gene: NEK1
product: NIMA related kinase 1, transcript variant X7
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
transcript id: XM_032470767.1
SIO_010081: NEK1
subclass of: SO_0000673
so part of: NEK1
location: complement(join(4322782..4324050,4330294..4330426,4330593..4330723,4331641..4331831,4333976..4334127,4337734..4337981,4338924..4339012,4344093..4344213,4346591..4346767,4356070..4356222,4358905..4359130,4359211..4359276,4361134..4361265,4370618..4370713,4371350..4371427,4371861..4371944,4372361..4372444,4382095..4382197,4384178..4384341,4384936..4385010,4385285..4385344,4389342..4389493,4392171..4392231,4396344..4396544,4397079..4397133,4397655..4397741,4397872..4397939,4400056..4400139,4403293..4403390,4405892..4405988,4406400..4406544,4411646..4412113))
location: region:4322782-4412113:-1
so has part: feature:4411646-4412113:-1:exon
so has part: feature:4406400-4406544:-1:exon
so has part: feature:4405892-4405988:-1:exon
so has part: feature:4403293-4403390:-1:exon
so has part: feature:4400056-4400139:-1:exon
so has part: feature:4397872-4397939:-1:exon
so has part: feature:4397655-4397741:-1:exon
so has part: feature:4397079-4397133:-1:exon
so has part: feature:4396344-4396544:-1:exon
so has part: feature:4392171-4392231:-1:exon
so has part: feature:4389342-4389493:-1:exon
so has part: feature:4385285-4385344:-1:exon
so has part: feature:4384936-4385010:-1:exon
so has part: feature:4384178-4384341:-1:exon
so has part: feature:4382095-4382197:-1:exon
so has part: feature:4372361-4372444:-1:exon
so has part: feature:4371861-4371944:-1:exon
so has part: feature:4371350-4371427:-1:exon
so has part: feature:4370618-4370713:-1:exon
so has part: feature:4361134-4361265:-1:exon
so has part: feature:4359211-4359276:-1:exon
so has part: feature:4358905-4359130:-1:exon
so has part: feature:4356070-4356222:-1:exon
so has part: feature:4346591-4346767:-1:exon
so has part: feature:4344093-4344213:-1:exon
so has part: feature:4338924-4339012:-1:exon
so has part: feature:4337734-4337981:-1:exon
so has part: feature:4333976-4334127:-1:exon
so has part: feature:4331641-4331831:-1:exon
so has part: feature:4330593-4330723:-1:exon
so has part: feature:4330294-4330426:-1:exon
so has part: feature:4322782-4324050:-1:exon

position:4412113:-1
position: 4412113
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4411646-4412113:-1:exon

position:4411646:-1
position: 4411646
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4406400-4406544:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4405892-4405988:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4403293-4403390:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4400056-4400139:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4397872-4397939:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4397655-4397741:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4397079-4397133:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4396344-4396544:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4392171-4392231:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:4389342-4389493:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:4385285-4385344:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:4384936-4385010:-1:exon

urn:…
SIO_000300: 14
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urn:…
SIO_000300: 32
SIO_000628: feature:4322782-4324050:-1:exon

NEK1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 419612
gene: NEK1
product: NIMA related kinase 1, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 28 samples with support for all annotated introns
transcript id: XM_032470765.1
SIO_010081: NEK1
subclass of: SO_0000673
so part of: NEK1
location: complement(join(4322782..4324050,4330294..4330426,4330593..4330723,4331641..4331831,4333976..4334127,4337734..4337981,4338924..4339012,4344093..4344213,4346591..4346767,4356070..4356222,4358905..4359130,4359211..4359276,4361134..4361265,4370618..4370713,4371350..4371427,4371861..4371944,4372361..4372444,4382095..4382197,4384178..4384341,4384936..4385010,4385144..4385191,4385285..4385344,4389342..4389493,4392171..4392231,4396344..4396544,4397079..4397133,4397655..4397741,4397872..4397939,4400056..4400139,4403293..4403390,4405892..4405988,4406400..4406544,4411646..4412113))
location: region:4322782-4412113:-1
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urn:…
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SIO_000628: feature:4322782-4324050:-1:exon

NEK1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 419612
gene: NEK1
product: NIMA related kinase 1, transcript variant X9
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
transcript id: XM_032470768.1
SIO_010081: NEK1
subclass of: SO_0000673
so part of: NEK1
location: complement(join(4322782..4324050,4330294..4330426,4330593..4330723,4331641..4331831,4333976..4334127,4337734..4337981,4338924..4339012,4344093..4344213,4346591..4346767,4356070..4356222,4358905..4359130,4359211..4359276,4361134..4361265,4370618..4370713,4371350..4371427,4371861..4371944,4382095..4382197,4384178..4384341,4384936..4385010,4385285..4385344,4385582..4385641,4389342..4389493,4392171..4392231,4396344..4396544,4397079..4397133,4397655..4397741,4397872..4397939,4400056..4400139,4403293..4403390,4405892..4405988,4406400..4406544,4411646..4412113))
location: region:4322782-4412113:-1
so has part: feature:4411646-4412113:-1:exon
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urn:…
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urn:…
SIO_000300: 32
SIO_000628: feature:4322782-4324050:-1:exon

NEK1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 419612
gene: NEK1
product: NIMA related kinase 1, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
transcript id: XM_032470762.1
SIO_010081: NEK1
subclass of: SO_0000673
so part of: NEK1
location: complement(join(4322782..4324050,4330294..4330426,4330593..4330723,4331641..4331831,4333976..4334127,4337734..4337981,4338924..4339012,4344093..4344213,4346591..4346767,4356070..4356222,4358905..4359130,4359211..4359276,4361134..4361265,4370618..4370713,4371350..4371427,4371861..4371944,4372361..4372444,4382095..4382197,4384178..4384341,4384936..4385010,4385285..4385344,4385582..4385641,4389342..4389493,4392171..4392231,4396344..4396544,4397079..4397133,4397655..4397741,4397872..4397939,4400056..4400139,4403293..4403390,4405892..4405988,4406400..4406544,4411646..4412113))
location: region:4322782-4412113:-1
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urn:…
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urn:…
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NEK1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 419612
gene: NEK1
product: NIMA related kinase 1, transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 31 samples with support for all annotated introns
transcript id: XM_032470766.1
SIO_010081: NEK1
subclass of: SO_0000673
so part of: NEK1
location: complement(join(4322782..4324050,4330294..4330426,4330593..4330723,4331641..4331831,4333976..4334127,4337734..4337981,4338924..4339012,4344093..4344213,4346591..4346767,4356070..4356222,4358905..4359130,4359211..4359276,4361134..4361265,4370618..4370713,4371350..4371427,4371861..4371944,4382095..4382197,4384178..4384341,4384936..4385010,4385144..4385191,4385285..4385344,4385582..4385641,4389342..4389493,4392171..4392231,4396344..4396544,4397079..4397133,4397655..4397741,4397872..4397939,4400056..4400139,4403293..4403390,4405892..4405988,4406400..4406544,4411646..4412113))
location: region:4322782-4412113:-1
so has part: feature:4411646-4412113:-1:exon
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so has part: feature:4384936-4385010:-1:exon
so has part: feature:4384178-4384341:-1:exon
so has part: feature:4382095-4382197:-1:exon
so has part: feature:4371861-4371944:-1:exon
so has part: feature:4371350-4371427:-1:exon
so has part: feature:4370618-4370713:-1:exon
so has part: feature:4361134-4361265:-1:exon
so has part: feature:4359211-4359276:-1:exon
so has part: feature:4358905-4359130:-1:exon
so has part: feature:4356070-4356222:-1:exon
so has part: feature:4346591-4346767:-1:exon
so has part: feature:4344093-4344213:-1:exon
so has part: feature:4338924-4339012:-1:exon
so has part: feature:4337734-4337981:-1:exon
so has part: feature:4333976-4334127:-1:exon
so has part: feature:4331641-4331831:-1:exon
so has part: feature:4330593-4330723:-1:exon
so has part: feature:4330294-4330426:-1:exon
so has part: feature:4322782-4324050:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4411646-4412113:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4406400-4406544:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4405892-4405988:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4403293-4403390:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4400056-4400139:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4397872-4397939:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4397655-4397741:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4397079-4397133:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4396344-4396544:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4392171-4392231:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:4389342-4389493:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:4385582-4385641:-1:exon

urn:…
SIO_000300: 13
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urn:…
SIO_000300: 14
SIO_000628: feature:4385144-4385191:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:4384936-4385010:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:4384178-4384341:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:4382095-4382197:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:4371861-4371944:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:4371350-4371427:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:4370618-4370713:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:4361134-4361265:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:4359211-4359276:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:4358905-4359130:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:4356070-4356222:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:4346591-4346767:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:4344093-4344213:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:4338924-4339012:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:4337734-4337981:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:4333976-4334127:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:4331641-4331831:-1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:4330593-4330723:-1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:4330294-4330426:-1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:4322782-4324050:-1:exon

NEK1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 419612
gene: NEK1
product: NIMA related kinase 1, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 32 samples with support for all annotated introns
transcript id: XM_032470761.1
SIO_010081: NEK1
subclass of: SO_0000673
so part of: NEK1
location: complement(join(4322782..4324050,4330294..4330426,4330593..4330723,4331641..4331831,4333976..4334127,4337734..4337981,4338939..4339012,4344093..4344213,4346591..4346767,4356070..4356222,4358905..4359130,4359211..4359276,4361134..4361265,4370618..4370713,4371350..4371427,4371861..4371944,4372361..4372444,4382095..4382197,4384178..4384341,4384936..4385010,4385144..4385191,4385285..4385344,4385582..4385641,4389342..4389493,4392171..4392231,4396344..4396544,4397079..4397133,4397655..4397741,4397872..4397939,4400056..4400139,4403293..4403390,4405892..4405988,4406400..4406544,4411646..4412113))
location: region:4322782-4412113:-1
so has part: feature:4411646-4412113:-1:exon
so has part: feature:4406400-4406544:-1:exon
so has part: feature:4405892-4405988:-1:exon
so has part: feature:4403293-4403390:-1:exon
so has part: feature:4400056-4400139:-1:exon
so has part: feature:4397872-4397939:-1:exon
so has part: feature:4397655-4397741:-1:exon
so has part: feature:4397079-4397133:-1:exon
so has part: feature:4396344-4396544:-1:exon
so has part: feature:4392171-4392231:-1:exon
so has part: feature:4389342-4389493:-1:exon
so has part: feature:4385582-4385641:-1:exon
so has part: feature:4385285-4385344:-1:exon
so has part: feature:4385144-4385191:-1:exon
so has part: feature:4384936-4385010:-1:exon
so has part: feature:4384178-4384341:-1:exon
so has part: feature:4382095-4382197:-1:exon
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so has part: feature:4371861-4371944:-1:exon
so has part: feature:4371350-4371427:-1:exon
so has part: feature:4370618-4370713:-1:exon
so has part: feature:4361134-4361265:-1:exon
so has part: feature:4359211-4359276:-1:exon
so has part: feature:4358905-4359130:-1:exon
so has part: feature:4356070-4356222:-1:exon
so has part: feature:4346591-4346767:-1:exon
so has part: feature:4344093-4344213:-1:exon
so has part: feature:4338939-4339012:-1:exon
so has part: feature:4337734-4337981:-1:exon
so has part: feature:4333976-4334127:-1:exon
so has part: feature:4331641-4331831:-1:exon
so has part: feature:4330593-4330723:-1:exon
so has part: feature:4330294-4330426:-1:exon
so has part: feature:4322782-4324050:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4411646-4412113:-1:exon

urn:…
SIO_000300: 2
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urn:…
SIO_000300: 3
SIO_000628: feature:4405892-4405988:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4403293-4403390:-1:exon

urn:…
SIO_000300: 5
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urn:…
SIO_000300: 6
SIO_000628: feature:4397872-4397939:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4397655-4397741:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4397079-4397133:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4396344-4396544:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4392171-4392231:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:4389342-4389493:-1:exon

urn:…
SIO_000300: 12
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urn:…
SIO_000300: 13
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urn:…
SIO_000300: 14
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urn:…
SIO_000300: 15
SIO_000628: feature:4384936-4385010:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:4384178-4384341:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:4382095-4382197:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:4372361-4372444:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:4371861-4371944:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:4371350-4371427:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:4370618-4370713:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:4361134-4361265:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:4359211-4359276:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:4358905-4359130:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:4356070-4356222:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:4346591-4346767:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:4344093-4344213:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:4338939-4339012:-1:exon

position:4338939:-1
position: 4338939
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 29
SIO_000628: feature:4337734-4337981:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:4333976-4334127:-1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:4331641-4331831:-1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:4330593-4330723:-1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:4330294-4330426:-1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:4322782-4324050:-1:exon

NEK1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 419612
gene: NEK1
product: NIMA related kinase 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 32 samples with support for all annotated introns
transcript id: XM_032470759.1
SIO_010081: NEK1
subclass of: SO_0000673
so part of: NEK1
location: complement(join(4322782..4324050,4330294..4330426,4330593..4330723,4331641..4331831,4333976..4334127,4337734..4337981,4338924..4339012,4344093..4344213,4346591..4346767,4356070..4356222,4358905..4359130,4359211..4359276,4361134..4361265,4370618..4370713,4371350..4371427,4371861..4371944,4372361..4372444,4382095..4382197,4384178..4384341,4384936..4385010,4385144..4385191,4385285..4385344,4385582..4385641,4389342..4389493,4392171..4392231,4396344..4396544,4397079..4397133,4397655..4397741,4397872..4397939,4400056..4400139,4403293..4403390,4405892..4405988,4406400..4406544,4411646..4412113))
location: region:4322782-4412113:-1
so has part: feature:4411646-4412113:-1:exon
so has part: feature:4406400-4406544:-1:exon
so has part: feature:4405892-4405988:-1:exon
so has part: feature:4403293-4403390:-1:exon
so has part: feature:4400056-4400139:-1:exon
so has part: feature:4397872-4397939:-1:exon
so has part: feature:4397655-4397741:-1:exon
so has part: feature:4397079-4397133:-1:exon
so has part: feature:4396344-4396544:-1:exon
so has part: feature:4392171-4392231:-1:exon
so has part: feature:4389342-4389493:-1:exon
so has part: feature:4385582-4385641:-1:exon
so has part: feature:4385285-4385344:-1:exon
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so has part: feature:4370618-4370713:-1:exon
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so has part: feature:4359211-4359276:-1:exon
so has part: feature:4358905-4359130:-1:exon
so has part: feature:4356070-4356222:-1:exon
so has part: feature:4346591-4346767:-1:exon
so has part: feature:4344093-4344213:-1:exon
so has part: feature:4338924-4339012:-1:exon
so has part: feature:4337734-4337981:-1:exon
so has part: feature:4333976-4334127:-1:exon
so has part: feature:4331641-4331831:-1:exon
so has part: feature:4330593-4330723:-1:exon
so has part: feature:4330294-4330426:-1:exon
so has part: feature:4322782-4324050:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4411646-4412113:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4406400-4406544:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4405892-4405988:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4403293-4403390:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4400056-4400139:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4397872-4397939:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4397655-4397741:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4397079-4397133:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4396344-4396544:-1:exon

urn:…
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SIO_000628: feature:4392171-4392231:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:4389342-4389493:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:4385582-4385641:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:4385285-4385344:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:4385144-4385191:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:4384936-4385010:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:4384178-4384341:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:4382095-4382197:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:4372361-4372444:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:4371861-4371944:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:4371350-4371427:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:4370618-4370713:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:4361134-4361265:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:4359211-4359276:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:4358905-4359130:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:4356070-4356222:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:4346591-4346767:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:4344093-4344213:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:4338924-4339012:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:4337734-4337981:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:4333976-4334127:-1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:4331641-4331831:-1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:4330593-4330723:-1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:4330294-4330426:-1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:4322782-4324050:-1:exon

NEK1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 419612
gene: NEK1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: serine/threonine-protein kinase Nek1 isoform X6
translation: MEKYVRVQKIGEGSFGKAILVKSTEDGRQYVIKEINISRMSNKEREESRREVAVLANMKHPNIVQYRESFEENGSLYIVMDYCEGGDLFRRINAQKGVLFQEDQILDWFVQICLALKHVHDRKILHRDIKSQNIFLTKDGTIQLGDFGIARVLNSTVELARTCIGTPYYLSPEICENKPYNNKSDVWALGCVLYEMCTLKHAFEAGSMKNLVLKIISGSFPPVSLHYSHDLRSLLSQLFKRNPRDRPSVNSILEKGFIARRIEKFLSPQLIAEEFCLKTFSKFGAQPIPAKRPASGQSLASVVSAQKITKPAAKYGVPLTYKKYGDKKLHEKKPLQRHKQEVTRKRRSELTEKEKKHKDQLERINRAREQGWRDVLSAGGGGEVKAPFFGSGGAVAPASFSSRGQYEHYHAIFDQMQQQRAEDREVKWKGNIPGRRPLERPRGPPAAERARQVEEFLQRRREARQNKARAEGHLGILHNLAALCGGRPSSSRGGKPRSKEEEVYLARLRQIRLQNFNERQQIRAKLRGEKKEADSPEGQEGSEEAGVRRKKVEALKAQASARAAVLKEQLERKRREAYERERKAWEEQLVAKGMKNSDMSPPSGQRGAGGPPSKQQAGPVFSVTSALKGVGLDRSLTDTQETPEEVQKTSSAVSSKREILRRLNQNLKAQEEENEKQGPSEPELSAAHEDAPGQERERAPADRRKWEAGGRLAVPAEGLTLDTSFSASGKHTVGEVIKLDPGGSPRKVWGRSPTDSVLKILGEAELQLQTGPLEDTVLGSEISPEREKCKPLMTGEEEVKCISPETDLSATADSSVETNGPNLSEASPQSSLKPEGNGDEPDDLETEVLQELRAADGGGGSPRTAVDVWVSEVEGTHAAELQDRITIQQSEASEDGAPGSTEQLGEPHAEPGADDSQHSECGIEKSVPPEPFFHRVVHPNHLSVASQVQSPPCSRGESFPLRPHSDSPPKSRKQNSLLIGLSTGLFDANNPKMLRTCSLPDLSKLFQTLMDVPTVGDVRQDSLEMDDVEEEHVKEGPSDSEDIAFAEADADLQELQASMERLLREPGDEDSEEERPALQSSGAGPGPGDEDDNPSSDSALHEAWHSDNSDGEVTSECEYESVFNHLEELRLHLEQEMGFEKFFEVYEKIKAVHEDEDENIEICSTVVQNLLGNEHEHLYAKILHLVMADGAYQEDNDE
SIO_010081: NEK1
subclass of: SO_0000673
so part of: NEK1
location: complement(join(4324037..4324050,4330294..4330426,4330593..4330723,4331641..4331831,4333976..4334127,4337734..4337981,4338924..4339012,4344093..4344213,4346591..4346767,4356070..4356222,4358905..4359130,4359211..4359276,4361134..4361265,4370618..4370713,4371350..4371427,4371861..4371944,4372361..4372444,4382095..4382197,4384178..4384341,4384936..4385010,4385285..4385344,4389342..4389493,4392171..4392231,4396344..4396544,4397079..4397133,4397655..4397741,4397872..4397939,4400056..4400139,4403293..4403390,4405892..4405988,4406400..4406516))
location: region:4324037-4406516:-1
so has part: feature:4406400-4406516:-1:exon
so has part: feature:4405892-4405988:-1:exon
so has part: feature:4403293-4403390:-1:exon
so has part: feature:4400056-4400139:-1:exon
so has part: feature:4397872-4397939:-1:exon
so has part: feature:4397655-4397741:-1:exon
so has part: feature:4397079-4397133:-1:exon
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so has part: feature:4392171-4392231:-1:exon
so has part: feature:4389342-4389493:-1:exon
so has part: feature:4385285-4385344:-1:exon
so has part: feature:4384936-4385010:-1:exon
so has part: feature:4384178-4384341:-1:exon
so has part: feature:4382095-4382197:-1:exon
so has part: feature:4372361-4372444:-1:exon
so has part: feature:4371861-4371944:-1:exon
so has part: feature:4371350-4371427:-1:exon
so has part: feature:4370618-4370713:-1:exon
so has part: feature:4361134-4361265:-1:exon
so has part: feature:4359211-4359276:-1:exon
so has part: feature:4358905-4359130:-1:exon
so has part: feature:4356070-4356222:-1:exon
so has part: feature:4346591-4346767:-1:exon
so has part: feature:4344093-4344213:-1:exon
so has part: feature:4338924-4339012:-1:exon
so has part: feature:4337734-4337981:-1:exon
so has part: feature:4333976-4334127:-1:exon
so has part: feature:4331641-4331831:-1:exon
so has part: feature:4330593-4330723:-1:exon
so has part: feature:4330294-4330426:-1:exon
so has part: feature:4324037-4324050:-1:exon

XP_032326658.1
type: Protein
SIO_000068: ncbiprotein

position:4324037:-1
position: 4324037
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4406516:-1
position: 4406516
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4406400-4406516:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4405892-4405988:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4403293-4403390:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4400056-4400139:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4397872-4397939:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4397655-4397741:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4397079-4397133:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4396344-4396544:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4392171-4392231:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4389342-4389493:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:4385285-4385344:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:4384936-4385010:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:4384178-4384341:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:4382095-4382197:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:4372361-4372444:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:4371861-4371944:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:4371350-4371427:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:4370618-4370713:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:4361134-4361265:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:4359211-4359276:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:4358905-4359130:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:4356070-4356222:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:4346591-4346767:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:4344093-4344213:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:4338924-4339012:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:4337734-4337981:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:4333976-4334127:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:4331641-4331831:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:4330593-4330723:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:4330294-4330426:-1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:4324037-4324050:-1:exon

NEK1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 419612
gene: NEK1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: serine/threonine-protein kinase Nek1 isoform X4
translation: MEKYVRVQKIGEGSFGKAILVKSTEDGRQYVIKEINISRMSNKEREESRREVAVLANMKHPNIVQYRESFEENGSLYIVMDYCEGGDLFRRINAQKGVLFQEDQILDWFVQICLALKHVHDRKILHRDIKSQNIFLTKDGTIQLGDFGIARVLNSTVELARTCIGTPYYLSPEICENKPYNNKSDVWALGCVLYEMCTLKHAFEAGSMKNLVLKIISGSFPPVSLHYSHDLRSLLSQLFKRNPRDRPSVNSILEKGFIARRIEKFLSPQLIAEEFCLKTFSKFGAQPIPAKRPASGQSLASVVSAQKITKPAAKYGVPLTYKKYGDKKLHEKKPLQRHKQEVTRKRRSELTEKEKKHKDQISFLKAEQLRRQEKDRLERINRAREQGWRDVLSAGGGGEVKAPFFGSGGAVAPASFSSRGQYEHYHAIFDQMQQQRAEDREVKWKGNIPGRRPLERPRGPPAAERARQVEEFLQRRREARQNKARAEGHLGILHNLAALCGGRPSSSRGGKPRSKEEEVYLARLRQIRLQNFNERQQIRAKLRGEKKEADSPEGQEGSEEAGVRRKKVEALKAQASARAAVLKEQLERKRREAYERERKAWEEQLVAKGMKNSDMSPPSGQRGAGGPPSKQQAGPVFSVTSALKGVGLDRSLTDTQETPEEVQKTSSAVSSKREILRRLNQNLKAQEEENEKQGPSEPELSAAHEDAPGQERERAPADRRKWEAGGRLAVPAEGLTLDTSFSASGKHTVGEVIKLDPGGSPRKVWGRSPTDSVLKILGEAELQLQTGPLEDTVLGSEISPEREKCKPLMTGEEEVKCISPETDLSATADSSVETNGPNLSEASPQSSLKPEGNGDEPDDLETEVLQELRAADGGGGSPRTAVDVWVSEVEGTHAAELQDRITIQQSEASEDGAPGSTEQLGEPHAEPGADDSQHSECGIEKSVPPEPFFHRVVHPNHLSVASQVQSPPCSRGESFPLRPHSDSPPKSRKQNSLLIGLSTGLFDANNPKMLRTCSLPDLSKLFQTLMDVPTVGDVRQDSLEMDDVEEEHVKEGPSDSEDIAFAEADADLQELQASMERLLREPGDEDSEEERPALQSSGAGPGPGDEDDNPSSDSALHEAWHSDNSDGEVTSECEYESVFNHLEELRLHLEQEMGFEKFFEVYEKIKAVHEDEDENIEICSTVVQNLLGNEHEHLYAKILHLVMADGAYQEDNDE
SIO_010081: NEK1
subclass of: SO_0000673
so part of: NEK1
location: complement(join(4324037..4324050,4330294..4330426,4330593..4330723,4331641..4331831,4333976..4334127,4337734..4337981,4338924..4339012,4344093..4344213,4346591..4346767,4356070..4356222,4358905..4359130,4359211..4359276,4361134..4361265,4370618..4370713,4371350..4371427,4371861..4371944,4372361..4372444,4382095..4382197,4384178..4384341,4384936..4385010,4385144..4385191,4385285..4385344,4389342..4389493,4392171..4392231,4396344..4396544,4397079..4397133,4397655..4397741,4397872..4397939,4400056..4400139,4403293..4403390,4405892..4405988,4406400..4406516))
location: region:4324037-4406516:-1
so has part: feature:4406400-4406516:-1:exon
so has part: feature:4405892-4405988:-1:exon
so has part: feature:4403293-4403390:-1:exon
so has part: feature:4400056-4400139:-1:exon
so has part: feature:4397872-4397939:-1:exon
so has part: feature:4397655-4397741:-1:exon
so has part: feature:4397079-4397133:-1:exon
so has part: feature:4396344-4396544:-1:exon
so has part: feature:4392171-4392231:-1:exon
so has part: feature:4389342-4389493:-1:exon
so has part: feature:4385285-4385344:-1:exon
so has part: feature:4385144-4385191:-1:exon
so has part: feature:4384936-4385010:-1:exon
so has part: feature:4384178-4384341:-1:exon
so has part: feature:4382095-4382197:-1:exon
so has part: feature:4372361-4372444:-1:exon
so has part: feature:4371861-4371944:-1:exon
so has part: feature:4371350-4371427:-1:exon
so has part: feature:4370618-4370713:-1:exon
so has part: feature:4361134-4361265:-1:exon
so has part: feature:4359211-4359276:-1:exon
so has part: feature:4358905-4359130:-1:exon
so has part: feature:4356070-4356222:-1:exon
so has part: feature:4346591-4346767:-1:exon
so has part: feature:4344093-4344213:-1:exon
so has part: feature:4338924-4339012:-1:exon
so has part: feature:4337734-4337981:-1:exon
so has part: feature:4333976-4334127:-1:exon
so has part: feature:4331641-4331831:-1:exon
so has part: feature:4330593-4330723:-1:exon
so has part: feature:4330294-4330426:-1:exon
so has part: feature:4324037-4324050:-1:exon

XP_032326656.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4406400-4406516:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4405892-4405988:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4403293-4403390:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4400056-4400139:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4397872-4397939:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4397655-4397741:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4397079-4397133:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4396344-4396544:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4392171-4392231:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4389342-4389493:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:4385285-4385344:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:4385144-4385191:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:4384936-4385010:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:4384178-4384341:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:4382095-4382197:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:4372361-4372444:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:4371861-4371944:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:4371350-4371427:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:4370618-4370713:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:4361134-4361265:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:4359211-4359276:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:4358905-4359130:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:4356070-4356222:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:4346591-4346767:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:4344093-4344213:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:4338924-4339012:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:4337734-4337981:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:4333976-4334127:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:4331641-4331831:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:4330593-4330723:-1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:4330294-4330426:-1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:4324037-4324050:-1:exon

NEK1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 419612
gene: NEK1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: serine/threonine-protein kinase Nek1 isoform X7
translation: MEKYVRVQKIGEGSFGKAILVKSTEDGRQYVIKEINISRMSNKEREESRREVAVLANMKHPNIVQYRESFEENGSLYIVMDYCEGGDLFRRINAQKGVLFQEDQILDWFVQICLALKHVHDRKILHRDIKSQNIFLTKDGTIQLGDFGIARVLNSTVELARTCIGTPYYLSPEICENKPYNNKSDVWALGCVLYEMCTLKHAFEAGSMKNLVLKIISGSFPPVSLHYSHDLRSLLSQLFKRNPRDRPSVNSILEKGFIARRIEKFLSPQLIAEEFCLKTFSKFGAQPIPAKRPASGQSLASVVSAQKITKPAAKYGVPLTYKKYGDKKLHEKKPLQRHKQTHQTPVKKMNPGEERRKMFEEVTRKRRSELTEKEKKHKDQLERINRAREQGWRDVLSAGGGGEVKAPFFGSGGAVAPASFSSRGQYEHYHAIFDQMQQQRAEDREVKWKGNIPGRRPLERPRGPPAAERARQVEEFLQRRREARQNKARAEGHLVYLARLRQIRLQNFNERQQIRAKLRGEKKEADSPEGQEGSEEAGVRRKKVEALKAQASARAAVLKEQLERKRREAYERERKAWEEQLVAKGMKNSDMSPPSGQRGAGGPPSKQQAGPVFSVTSALKGVGLDRSLTDTQETPEEVQKTSSAVSSKREILRRLNQNLKAQEEENEKQGPSEPELSAAHEDAPGQERERAPADRRKWEAGGRLAVPAEGLTLDTSFSASGKHTVGEVIKLDPGGSPRKVWGRSPTDSVLKILGEAELQLQTGPLEDTVLGSEISPEREKCKPLMTGEEEVKCISPETDLSATADSSVETNGPNLSEASPQSSLKPEGNGDEPDDLETEVLQELRAADGGGGSPRTAVDVWVSEVEGTHAAELQDRITIQQSEASEDGAPGSTEQLGEPHAEPGADDSQHSECGIEKSVPPEPFFHRVVHPNHLSVASQVQSPPCSRGESFPLRPHSDSPPKSRKQNSLLIGLSTGLFDANNPKMLRTCSLPDLSKLFQTLMDVPTVGDVRQDSLEMDDVEEEHVKEGPSDSEDIAFAEADADLQELQASMERLLREPGDEDSEEERPALQSSGAGPGPGDEDDNPSSDSALHEAWHSDNSDGEVTSECEYESVFNHLEELRLHLEQEMGFEKFFEVYEKIKAVHEDEDENIEICSTVVQNLLGNEHEHLYAKILHLVMADGAYQEDNDE
SIO_010081: NEK1
subclass of: SO_0000673
so part of: NEK1
location: complement(join(4324037..4324050,4330294..4330426,4330593..4330723,4331641..4331831,4333976..4334127,4337734..4337981,4338924..4339012,4344093..4344213,4346591..4346767,4356070..4356222,4358905..4359130,4359211..4359276,4361134..4361265,4370618..4370713,4371350..4371427,4371861..4371944,4382095..4382197,4384178..4384341,4384936..4385010,4385285..4385344,4385582..4385641,4389342..4389493,4392171..4392231,4396344..4396544,4397079..4397133,4397655..4397741,4397872..4397939,4400056..4400139,4403293..4403390,4405892..4405988,4406400..4406516))
location: region:4324037-4406516:-1
so has part: feature:4406400-4406516:-1:exon
so has part: feature:4405892-4405988:-1:exon
so has part: feature:4403293-4403390:-1:exon
so has part: feature:4400056-4400139:-1:exon
so has part: feature:4397872-4397939:-1:exon
so has part: feature:4397655-4397741:-1:exon
so has part: feature:4397079-4397133:-1:exon
so has part: feature:4396344-4396544:-1:exon
so has part: feature:4392171-4392231:-1:exon
so has part: feature:4389342-4389493:-1:exon
so has part: feature:4385582-4385641:-1:exon
so has part: feature:4385285-4385344:-1:exon
so has part: feature:4384936-4385010:-1:exon
so has part: feature:4384178-4384341:-1:exon
so has part: feature:4382095-4382197:-1:exon
so has part: feature:4371861-4371944:-1:exon
so has part: feature:4371350-4371427:-1:exon
so has part: feature:4370618-4370713:-1:exon
so has part: feature:4361134-4361265:-1:exon
so has part: feature:4359211-4359276:-1:exon
so has part: feature:4358905-4359130:-1:exon
so has part: feature:4356070-4356222:-1:exon
so has part: feature:4346591-4346767:-1:exon
so has part: feature:4344093-4344213:-1:exon
so has part: feature:4338924-4339012:-1:exon
so has part: feature:4337734-4337981:-1:exon
so has part: feature:4333976-4334127:-1:exon
so has part: feature:4331641-4331831:-1:exon
so has part: feature:4330593-4330723:-1:exon
so has part: feature:4330294-4330426:-1:exon
so has part: feature:4324037-4324050:-1:exon

XP_032326659.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4406400-4406516:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4405892-4405988:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4403293-4403390:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4400056-4400139:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4397872-4397939:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4397655-4397741:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4397079-4397133:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4396344-4396544:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4392171-4392231:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4389342-4389493:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:4385582-4385641:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:4385285-4385344:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:4384936-4385010:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:4384178-4384341:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:4382095-4382197:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:4371861-4371944:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:4371350-4371427:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:4370618-4370713:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:4361134-4361265:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:4359211-4359276:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:4358905-4359130:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:4356070-4356222:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:4346591-4346767:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:4344093-4344213:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:4338924-4339012:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:4337734-4337981:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:4333976-4334127:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:4331641-4331831:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:4330593-4330723:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:4330294-4330426:-1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:4324037-4324050:-1:exon

NEK1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 419612
gene: NEK1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: serine/threonine-protein kinase Nek1 isoform X3
translation: MEKYVRVQKIGEGSFGKAILVKSTEDGRQYVIKEINISRMSNKEREESRREVAVLANMKHPNIVQYRESFEENGSLYIVMDYCEGGDLFRRINAQKGVLFQEDQILDWFVQICLALKHVHDRKILHRDIKSQNIFLTKDGTIQLGDFGIARVLNSTVELARTCIGTPYYLSPEICENKPYNNKSDVWALGCVLYEMCTLKHAFEAGSMKNLVLKIISGSFPPVSLHYSHDLRSLLSQLFKRNPRDRPSVNSILEKGFIARRIEKFLSPQLIAEEFCLKTFSKFGAQPIPAKRPASGQSLASVVSAQKITKPAAKYGVPLTYKKYGDKKLHEKKPLQRHKQTHQTPVKKMNPGEERRKMFEEVTRKRRSELTEKEKKHKDQLERINRAREQGWRDVLSAGGGGEVKAPFFGSGGAVAPASFSSRGQYEHYHAIFDQMQQQRAEDREVKWKGNIPGRRPLERPRGPPAAERARQVEEFLQRRREARQNKARAEGHLGILHNLAALCGGRPSSSRGGKPRSKEEEVYLARLRQIRLQNFNERQQIRAKLRGEKKEADSPEGQEGSEEAGVRRKKVEALKAQASARAAVLKEQLERKRREAYERERKAWEEQLVAKGMKNSDMSPPSGQRGAGGPPSKQQAGPVFSVTSALKGVGLDRSLTDTQETPEEVQKTSSAVSSKREILRRLNQNLKAQEEENEKQGPSEPELSAAHEDAPGQERERAPADRRKWEAGGRLAVPAEGLTLDTSFSASGKHTVGEVIKLDPGGSPRKVWGRSPTDSVLKILGEAELQLQTGPLEDTVLGSEISPEREKCKPLMTGEEEVKCISPETDLSATADSSVETNGPNLSEASPQSSLKPEGNGDEPDDLETEVLQELRAADGGGGSPRTAVDVWVSEVEGTHAAELQDRITIQQSEASEDGAPGSTEQLGEPHAEPGADDSQHSECGIEKSVPPEPFFHRVVHPNHLSVASQVQSPPCSRGESFPLRPHSDSPPKSRKQNSLLIGLSTGLFDANNPKMLRTCSLPDLSKLFQTLMDVPTVGDVRQDSLEMDDVEEEHVKEGPSDSEDIAFAEADADLQELQASMERLLREPGDEDSEEERPALQSSGAGPGPGDEDDNPSSDSALHEAWHSDNSDGEVTSECEYESVFNHLEELRLHLEQEMGFEKFFEVYEKIKAVHEDEDENIEICSTVVQNLLGNEHEHLYAKILHLVMADGAYQEDNDE
SIO_010081: NEK1
subclass of: SO_0000673
so part of: NEK1
location: complement(join(4324037..4324050,4330294..4330426,4330593..4330723,4331641..4331831,4333976..4334127,4337734..4337981,4338924..4339012,4344093..4344213,4346591..4346767,4356070..4356222,4358905..4359130,4359211..4359276,4361134..4361265,4370618..4370713,4371350..4371427,4371861..4371944,4372361..4372444,4382095..4382197,4384178..4384341,4384936..4385010,4385285..4385344,4385582..4385641,4389342..4389493,4392171..4392231,4396344..4396544,4397079..4397133,4397655..4397741,4397872..4397939,4400056..4400139,4403293..4403390,4405892..4405988,4406400..4406516))
location: region:4324037-4406516:-1
so has part: feature:4406400-4406516:-1:exon
so has part: feature:4405892-4405988:-1:exon
so has part: feature:4403293-4403390:-1:exon
so has part: feature:4400056-4400139:-1:exon
so has part: feature:4397872-4397939:-1:exon
so has part: feature:4397655-4397741:-1:exon
so has part: feature:4397079-4397133:-1:exon
so has part: feature:4396344-4396544:-1:exon
so has part: feature:4392171-4392231:-1:exon
so has part: feature:4389342-4389493:-1:exon
so has part: feature:4385582-4385641:-1:exon
so has part: feature:4385285-4385344:-1:exon
so has part: feature:4384936-4385010:-1:exon
so has part: feature:4384178-4384341:-1:exon
so has part: feature:4382095-4382197:-1:exon
so has part: feature:4372361-4372444:-1:exon
so has part: feature:4371861-4371944:-1:exon
so has part: feature:4371350-4371427:-1:exon
so has part: feature:4370618-4370713:-1:exon
so has part: feature:4361134-4361265:-1:exon
so has part: feature:4359211-4359276:-1:exon
so has part: feature:4358905-4359130:-1:exon
so has part: feature:4356070-4356222:-1:exon
so has part: feature:4346591-4346767:-1:exon
so has part: feature:4344093-4344213:-1:exon
so has part: feature:4338924-4339012:-1:exon
so has part: feature:4337734-4337981:-1:exon
so has part: feature:4333976-4334127:-1:exon
so has part: feature:4331641-4331831:-1:exon
so has part: feature:4330593-4330723:-1:exon
so has part: feature:4330294-4330426:-1:exon
so has part: feature:4324037-4324050:-1:exon

XP_032326653.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4406400-4406516:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4405892-4405988:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4403293-4403390:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4400056-4400139:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4397872-4397939:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4397655-4397741:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4397079-4397133:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4396344-4396544:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4392171-4392231:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4389342-4389493:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:4385582-4385641:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:4385285-4385344:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:4384936-4385010:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:4384178-4384341:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:4382095-4382197:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:4372361-4372444:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:4371861-4371944:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:4371350-4371427:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:4370618-4370713:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:4361134-4361265:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:4359211-4359276:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:4358905-4359130:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:4356070-4356222:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:4346591-4346767:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:4344093-4344213:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:4338924-4339012:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:4337734-4337981:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:4333976-4334127:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:4331641-4331831:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:4330593-4330723:-1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:4330294-4330426:-1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:4324037-4324050:-1:exon

NEK1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 419612
gene: NEK1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: serine/threonine-protein kinase Nek1 isoform X5
translation: MEKYVRVQKIGEGSFGKAILVKSTEDGRQYVIKEINISRMSNKEREESRREVAVLANMKHPNIVQYRESFEENGSLYIVMDYCEGGDLFRRINAQKGVLFQEDQILDWFVQICLALKHVHDRKILHRDIKSQNIFLTKDGTIQLGDFGIARVLNSTVELARTCIGTPYYLSPEICENKPYNNKSDVWALGCVLYEMCTLKHAFEAGSMKNLVLKIISGSFPPVSLHYSHDLRSLLSQLFKRNPRDRPSVNSILEKGFIARRIEKFLSPQLIAEEFCLKTFSKFGAQPIPAKRPASGQSLASVVSAQKITKPAAKYGVPLTYKKYGDKKLHEKKPLQRHKQTHQTPVKKMNPGEERRKMFEEVTRKRRSELTEKEKKHKDQISFLKAEQLRRQEKDRLERINRAREQGWRDVLSAGGGGEVKAPFFGSGGAVAPASFSSRGQYEHYHAIFDQMQQQRAEDREVKWKGNIPGRRPLERPRGPPAAERARQVEEFLQRRREARQNKARAEGHLVYLARLRQIRLQNFNERQQIRAKLRGEKKEADSPEGQEGSEEAGVRRKKVEALKAQASARAAVLKEQLERKRREAYERERKAWEEQLVAKGMKNSDMSPPSGQRGAGGPPSKQQAGPVFSVTSALKGVGLDRSLTDTQETPEEVQKTSSAVSSKREILRRLNQNLKAQEEENEKQGPSEPELSAAHEDAPGQERERAPADRRKWEAGGRLAVPAEGLTLDTSFSASGKHTVGEVIKLDPGGSPRKVWGRSPTDSVLKILGEAELQLQTGPLEDTVLGSEISPEREKCKPLMTGEEEVKCISPETDLSATADSSVETNGPNLSEASPQSSLKPEGNGDEPDDLETEVLQELRAADGGGGSPRTAVDVWVSEVEGTHAAELQDRITIQQSEASEDGAPGSTEQLGEPHAEPGADDSQHSECGIEKSVPPEPFFHRVVHPNHLSVASQVQSPPCSRGESFPLRPHSDSPPKSRKQNSLLIGLSTGLFDANNPKMLRTCSLPDLSKLFQTLMDVPTVGDVRQDSLEMDDVEEEHVKEGPSDSEDIAFAEADADLQELQASMERLLREPGDEDSEEERPALQSSGAGPGPGDEDDNPSSDSALHEAWHSDNSDGEVTSECEYESVFNHLEELRLHLEQEMGFEKFFEVYEKIKAVHEDEDENIEICSTVVQNLLGNEHEHLYAKILHLVMADGAYQEDNDE
SIO_010081: NEK1
subclass of: SO_0000673
so part of: NEK1
location: complement(join(4324037..4324050,4330294..4330426,4330593..4330723,4331641..4331831,4333976..4334127,4337734..4337981,4338924..4339012,4344093..4344213,4346591..4346767,4356070..4356222,4358905..4359130,4359211..4359276,4361134..4361265,4370618..4370713,4371350..4371427,4371861..4371944,4382095..4382197,4384178..4384341,4384936..4385010,4385144..4385191,4385285..4385344,4385582..4385641,4389342..4389493,4392171..4392231,4396344..4396544,4397079..4397133,4397655..4397741,4397872..4397939,4400056..4400139,4403293..4403390,4405892..4405988,4406400..4406516))
location: region:4324037-4406516:-1
so has part: feature:4406400-4406516:-1:exon
so has part: feature:4405892-4405988:-1:exon
so has part: feature:4403293-4403390:-1:exon
so has part: feature:4400056-4400139:-1:exon
so has part: feature:4397872-4397939:-1:exon
so has part: feature:4397655-4397741:-1:exon
so has part: feature:4397079-4397133:-1:exon
so has part: feature:4396344-4396544:-1:exon
so has part: feature:4392171-4392231:-1:exon
so has part: feature:4389342-4389493:-1:exon
so has part: feature:4385582-4385641:-1:exon
so has part: feature:4385285-4385344:-1:exon
so has part: feature:4385144-4385191:-1:exon
so has part: feature:4384936-4385010:-1:exon
so has part: feature:4384178-4384341:-1:exon
so has part: feature:4382095-4382197:-1:exon
so has part: feature:4371861-4371944:-1:exon
so has part: feature:4371350-4371427:-1:exon
so has part: feature:4370618-4370713:-1:exon
so has part: feature:4361134-4361265:-1:exon
so has part: feature:4359211-4359276:-1:exon
so has part: feature:4358905-4359130:-1:exon
so has part: feature:4356070-4356222:-1:exon
so has part: feature:4346591-4346767:-1:exon
so has part: feature:4344093-4344213:-1:exon
so has part: feature:4338924-4339012:-1:exon
so has part: feature:4337734-4337981:-1:exon
so has part: feature:4333976-4334127:-1:exon
so has part: feature:4331641-4331831:-1:exon
so has part: feature:4330593-4330723:-1:exon
so has part: feature:4330294-4330426:-1:exon
so has part: feature:4324037-4324050:-1:exon

XP_032326657.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4406400-4406516:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4405892-4405988:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4403293-4403390:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4400056-4400139:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4397872-4397939:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4397655-4397741:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4397079-4397133:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4396344-4396544:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4392171-4392231:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4389342-4389493:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:4385582-4385641:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:4385285-4385344:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:4385144-4385191:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:4384936-4385010:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:4384178-4384341:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:4382095-4382197:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:4371861-4371944:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:4371350-4371427:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:4370618-4370713:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:4361134-4361265:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:4359211-4359276:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:4358905-4359130:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:4356070-4356222:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:4346591-4346767:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:4344093-4344213:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:4338924-4339012:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:4337734-4337981:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:4333976-4334127:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:4331641-4331831:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:4330593-4330723:-1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:4330294-4330426:-1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:4324037-4324050:-1:exon

NEK1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 419612
gene: NEK1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: serine/threonine-protein kinase Nek1 isoform X2
translation: MEKYVRVQKIGEGSFGKAILVKSTEDGRQYVIKEINISRMSNKEREESRREVAVLANMKHPNIVQYRESFEENGSLYIVMDYCEGGDLFRRINAQKGVLFQEDQILDWFVQICLALKHVHDRKILHRDIKSQNIFLTKDGTIQLGDFGIARVLNSTVELARTCIGTPYYLSPEICENKPYNNKSDVWALGCVLYEMCTLKHAFEAGSMKNLVLKIISGSFPPVSLHYSHDLRSLLSQLFKRNPRDRPSVNSILEKGFIARRIEKFLSPQLIAEEFCLKTFSKFGAQPIPAKRPASGQSLASVVSAQKITKPAAKYGVPLTYKKYGDKKLHEKKPLQRHKQTHQTPVKKMNPGEERRKMFEEVTRKRRSELTEKEKKHKDQISFLKAEQLRRQEKDRLERINRAREQGWRDVLSAGGGGEVKAPFFGSGGAVAPASFSSRGQYEHYHAIFDQMQQQRAEDREVKWKGNIPGRRPLERPRGPPAAERARQVEEFLQRRREARQNKARAEGHLGILHNLAALCGGRPSSSRGGKPRSKEEEVYLARLRQIRLQNFNERQQIRAKLRGEKKEADSPEGQEGSEEAGVRRKKVEALKAQASARAAVLKEQLERKRREAYERERKAWEEQLVAKGMKNSDMSPPSGQRGAGGPPSKQQAGPVFSVTSALKGVGLDRSLTDTQETPEEVQKTSSAVSSKREILRRLNQNLKAQEEENEKQGPSEPELSAAHEDAPGQERERAPADRRKWEAGGRLAVPAEGLTLDTSFSASGKHTVGEVIKLDPGGSPRKVWGRSPTDSVLKILGEAELQLQTGPLEDTVLGSEISPEREKCKPLMTGEEEVKCISPETDLSATADSSVETNGPNLSEASPQSSLKPEGNGDEPDDLETEVLQELRAADGGGGSPRTAVDVWVSEVEGTHAAELQDRITIQQSEASEDGAPGSTEQLEPGADDSQHSECGIEKSVPPEPFFHRVVHPNHLSVASQVQSPPCSRGESFPLRPHSDSPPKSRKQNSLLIGLSTGLFDANNPKMLRTCSLPDLSKLFQTLMDVPTVGDVRQDSLEMDDVEEEHVKEGPSDSEDIAFAEADADLQELQASMERLLREPGDEDSEEERPALQSSGAGPGPGDEDDNPSSDSALHEAWHSDNSDGEVTSECEYESVFNHLEELRLHLEQEMGFEKFFEVYEKIKAVHEDEDENIEICSTVVQNLLGNEHEHLYAKILHLVMADGAYQEDNDE
SIO_010081: NEK1
subclass of: SO_0000673
so part of: NEK1
location: complement(join(4324037..4324050,4330294..4330426,4330593..4330723,4331641..4331831,4333976..4334127,4337734..4337981,4338939..4339012,4344093..4344213,4346591..4346767,4356070..4356222,4358905..4359130,4359211..4359276,4361134..4361265,4370618..4370713,4371350..4371427,4371861..4371944,4372361..4372444,4382095..4382197,4384178..4384341,4384936..4385010,4385144..4385191,4385285..4385344,4385582..4385641,4389342..4389493,4392171..4392231,4396344..4396544,4397079..4397133,4397655..4397741,4397872..4397939,4400056..4400139,4403293..4403390,4405892..4405988,4406400..4406516))
location: region:4324037-4406516:-1
so has part: feature:4406400-4406516:-1:exon
so has part: feature:4405892-4405988:-1:exon
so has part: feature:4403293-4403390:-1:exon
so has part: feature:4400056-4400139:-1:exon
so has part: feature:4397872-4397939:-1:exon
so has part: feature:4397655-4397741:-1:exon
so has part: feature:4397079-4397133:-1:exon
so has part: feature:4396344-4396544:-1:exon
so has part: feature:4392171-4392231:-1:exon
so has part: feature:4389342-4389493:-1:exon
so has part: feature:4385582-4385641:-1:exon
so has part: feature:4385285-4385344:-1:exon
so has part: feature:4385144-4385191:-1:exon
so has part: feature:4384936-4385010:-1:exon
so has part: feature:4384178-4384341:-1:exon
so has part: feature:4382095-4382197:-1:exon
so has part: feature:4372361-4372444:-1:exon
so has part: feature:4371861-4371944:-1:exon
so has part: feature:4371350-4371427:-1:exon
so has part: feature:4370618-4370713:-1:exon
so has part: feature:4361134-4361265:-1:exon
so has part: feature:4359211-4359276:-1:exon
so has part: feature:4358905-4359130:-1:exon
so has part: feature:4356070-4356222:-1:exon
so has part: feature:4346591-4346767:-1:exon
so has part: feature:4344093-4344213:-1:exon
so has part: feature:4338939-4339012:-1:exon
so has part: feature:4337734-4337981:-1:exon
so has part: feature:4333976-4334127:-1:exon
so has part: feature:4331641-4331831:-1:exon
so has part: feature:4330593-4330723:-1:exon
so has part: feature:4330294-4330426:-1:exon
so has part: feature:4324037-4324050:-1:exon

XP_032326652.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4406400-4406516:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4405892-4405988:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4403293-4403390:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4400056-4400139:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4397872-4397939:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4397655-4397741:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4397079-4397133:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4396344-4396544:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4392171-4392231:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4389342-4389493:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:4385582-4385641:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:4385285-4385344:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:4385144-4385191:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:4384936-4385010:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:4384178-4384341:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:4382095-4382197:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:4372361-4372444:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:4371861-4371944:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:4371350-4371427:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:4370618-4370713:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:4361134-4361265:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:4359211-4359276:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:4358905-4359130:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:4356070-4356222:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:4346591-4346767:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:4344093-4344213:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:4338939-4339012:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:4337734-4337981:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:4333976-4334127:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:4331641-4331831:-1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:4330593-4330723:-1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:4330294-4330426:-1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:4324037-4324050:-1:exon

NEK1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 419612
gene: NEK1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: serine/threonine-protein kinase Nek1 isoform X1
translation: MEKYVRVQKIGEGSFGKAILVKSTEDGRQYVIKEINISRMSNKEREESRREVAVLANMKHPNIVQYRESFEENGSLYIVMDYCEGGDLFRRINAQKGVLFQEDQILDWFVQICLALKHVHDRKILHRDIKSQNIFLTKDGTIQLGDFGIARVLNSTVELARTCIGTPYYLSPEICENKPYNNKSDVWALGCVLYEMCTLKHAFEAGSMKNLVLKIISGSFPPVSLHYSHDLRSLLSQLFKRNPRDRPSVNSILEKGFIARRIEKFLSPQLIAEEFCLKTFSKFGAQPIPAKRPASGQSLASVVSAQKITKPAAKYGVPLTYKKYGDKKLHEKKPLQRHKQTHQTPVKKMNPGEERRKMFEEVTRKRRSELTEKEKKHKDQISFLKAEQLRRQEKDRLERINRAREQGWRDVLSAGGGGEVKAPFFGSGGAVAPASFSSRGQYEHYHAIFDQMQQQRAEDREVKWKGNIPGRRPLERPRGPPAAERARQVEEFLQRRREARQNKARAEGHLGILHNLAALCGGRPSSSRGGKPRSKEEEVYLARLRQIRLQNFNERQQIRAKLRGEKKEADSPEGQEGSEEAGVRRKKVEALKAQASARAAVLKEQLERKRREAYERERKAWEEQLVAKGMKNSDMSPPSGQRGAGGPPSKQQAGPVFSVTSALKGVGLDRSLTDTQETPEEVQKTSSAVSSKREILRRLNQNLKAQEEENEKQGPSEPELSAAHEDAPGQERERAPADRRKWEAGGRLAVPAEGLTLDTSFSASGKHTVGEVIKLDPGGSPRKVWGRSPTDSVLKILGEAELQLQTGPLEDTVLGSEISPEREKCKPLMTGEEEVKCISPETDLSATADSSVETNGPNLSEASPQSSLKPEGNGDEPDDLETEVLQELRAADGGGGSPRTAVDVWVSEVEGTHAAELQDRITIQQSEASEDGAPGSTEQLGEPHAEPGADDSQHSECGIEKSVPPEPFFHRVVHPNHLSVASQVQSPPCSRGESFPLRPHSDSPPKSRKQNSLLIGLSTGLFDANNPKMLRTCSLPDLSKLFQTLMDVPTVGDVRQDSLEMDDVEEEHVKEGPSDSEDIAFAEADADLQELQASMERLLREPGDEDSEEERPALQSSGAGPGPGDEDDNPSSDSALHEAWHSDNSDGEVTSECEYESVFNHLEELRLHLEQEMGFEKFFEVYEKIKAVHEDEDENIEICSTVVQNLLGNEHEHLYAKILHLVMADGAYQEDNDE
SIO_010081: NEK1
subclass of: SO_0000673
so part of: NEK1
location: complement(join(4324037..4324050,4330294..4330426,4330593..4330723,4331641..4331831,4333976..4334127,4337734..4337981,4338924..4339012,4344093..4344213,4346591..4346767,4356070..4356222,4358905..4359130,4359211..4359276,4361134..4361265,4370618..4370713,4371350..4371427,4371861..4371944,4372361..4372444,4382095..4382197,4384178..4384341,4384936..4385010,4385144..4385191,4385285..4385344,4385582..4385641,4389342..4389493,4392171..4392231,4396344..4396544,4397079..4397133,4397655..4397741,4397872..4397939,4400056..4400139,4403293..4403390,4405892..4405988,4406400..4406516))
location: region:4324037-4406516:-1
so has part: feature:4406400-4406516:-1:exon
so has part: feature:4405892-4405988:-1:exon
so has part: feature:4403293-4403390:-1:exon
so has part: feature:4400056-4400139:-1:exon
so has part: feature:4397872-4397939:-1:exon
so has part: feature:4397655-4397741:-1:exon
so has part: feature:4397079-4397133:-1:exon
so has part: feature:4396344-4396544:-1:exon
so has part: feature:4392171-4392231:-1:exon
so has part: feature:4389342-4389493:-1:exon
so has part: feature:4385582-4385641:-1:exon
so has part: feature:4385285-4385344:-1:exon
so has part: feature:4385144-4385191:-1:exon
so has part: feature:4384936-4385010:-1:exon
so has part: feature:4384178-4384341:-1:exon
so has part: feature:4382095-4382197:-1:exon
so has part: feature:4372361-4372444:-1:exon
so has part: feature:4371861-4371944:-1:exon
so has part: feature:4371350-4371427:-1:exon
so has part: feature:4370618-4370713:-1:exon
so has part: feature:4361134-4361265:-1:exon
so has part: feature:4359211-4359276:-1:exon
so has part: feature:4358905-4359130:-1:exon
so has part: feature:4356070-4356222:-1:exon
so has part: feature:4346591-4346767:-1:exon
so has part: feature:4344093-4344213:-1:exon
so has part: feature:4338924-4339012:-1:exon
so has part: feature:4337734-4337981:-1:exon
so has part: feature:4333976-4334127:-1:exon
so has part: feature:4331641-4331831:-1:exon
so has part: feature:4330593-4330723:-1:exon
so has part: feature:4330294-4330426:-1:exon
so has part: feature:4324037-4324050:-1:exon

XP_032326650.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4406400-4406516:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4405892-4405988:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4403293-4403390:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4400056-4400139:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4397872-4397939:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4397655-4397741:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4397079-4397133:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4396344-4396544:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4392171-4392231:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4389342-4389493:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:4385582-4385641:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:4385285-4385344:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:4385144-4385191:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:4384936-4385010:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:4384178-4384341:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:4382095-4382197:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:4372361-4372444:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:4371861-4371944:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:4371350-4371427:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:4370618-4370713:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:4361134-4361265:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:4359211-4359276:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:4358905-4359130:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:4356070-4356222:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:4346591-4346767:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:4344093-4344213:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:4338924-4339012:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:4337734-4337981:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:4333976-4334127:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:4331641-4331831:-1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:4330593-4330723:-1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:4330294-4330426:-1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:4324037-4324050:-1:exon

NEK1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 419612
gene: NEK1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: serine/threonine-protein kinase Nek1 isoform X1
translation: MEKYVRVQKIGEGSFGKAILVKSTEDGRQYVIKEINISRMSNKEREESRREVAVLANMKHPNIVQYRESFEENGSLYIVMDYCEGGDLFRRINAQKGVLFQEDQILDWFVQICLALKHVHDRKILHRDIKSQNIFLTKDGTIQLGDFGIARVLNSTVELARTCIGTPYYLSPEICENKPYNNKSDVWALGCVLYEMCTLKHAFEAGSMKNLVLKIISGSFPPVSLHYSHDLRSLLSQLFKRNPRDRPSVNSILEKGFIARRIEKFLSPQLIAEEFCLKTFSKFGAQPIPAKRPASGQSLASVVSAQKITKPAAKYGVPLTYKKYGDKKLHEKKPLQRHKQTHQTPVKKMNPGEERRKMFEEVTRKRRSELTEKEKKHKDQISFLKAEQLRRQEKDRLERINRAREQGWRDVLSAGGGGEVKAPFFGSGGAVAPASFSSRGQYEHYHAIFDQMQQQRAEDREVKWKGNIPGRRPLERPRGPPAAERARQVEEFLQRRREARQNKARAEGHLGILHNLAALCGGRPSSSRGGKPRSKEEEVYLARLRQIRLQNFNERQQIRAKLRGEKKEADSPEGQEGSEEAGVRRKKVEALKAQASARAAVLKEQLERKRREAYERERKAWEEQLVAKGMKNSDMSPPSGQRGAGGPPSKQQAGPVFSVTSALKGVGLDRSLTDTQETPEEVQKTSSAVSSKREILRRLNQNLKAQEEENEKQGPSEPELSAAHEDAPGQERERAPADRRKWEAGGRLAVPAEGLTLDTSFSASGKHTVGEVIKLDPGGSPRKVWGRSPTDSVLKILGEAELQLQTGPLEDTVLGSEISPEREKCKPLMTGEEEVKCISPETDLSATADSSVETNGPNLSEASPQSSLKPEGNGDEPDDLETEVLQELRAADGGGGSPRTAVDVWVSEVEGTHAAELQDRITIQQSEASEDGAPGSTEQLGEPHAEPGADDSQHSECGIEKSVPPEPFFHRVVHPNHLSVASQVQSPPCSRGESFPLRPHSDSPPKSRKQNSLLIGLSTGLFDANNPKMLRTCSLPDLSKLFQTLMDVPTVGDVRQDSLEMDDVEEEHVKEGPSDSEDIAFAEADADLQELQASMERLLREPGDEDSEEERPALQSSGAGPGPGDEDDNPSSDSALHEAWHSDNSDGEVTSECEYESVFNHLEELRLHLEQEMGFEKFFEVYEKIKAVHEDEDENIEICSTVVQNLLGNEHEHLYAKILHLVMADGAYQEDNDE
SIO_010081: NEK1
subclass of: SO_0000673
so part of: NEK1
location: complement(join(4324037..4324050,4330294..4330426,4330593..4330723,4331641..4331831,4333976..4334127,4337734..4337981,4338924..4339012,4344093..4344213,4346591..4346767,4356070..4356222,4358905..4359130,4359211..4359276,4361134..4361265,4370618..4370713,4371350..4371427,4371861..4371944,4372361..4372444,4382095..4382197,4384178..4384341,4384936..4385010,4385144..4385191,4385285..4385344,4385582..4385641,4389342..4389493,4392171..4392231,4396344..4396544,4397079..4397133,4397655..4397741,4397872..4397939,4400056..4400139,4403293..4403390,4405892..4405988,4406400..4406516))
location: region:4324037-4406516:-1
so has part: feature:4406400-4406516:-1:exon
so has part: feature:4405892-4405988:-1:exon
so has part: feature:4403293-4403390:-1:exon
so has part: feature:4400056-4400139:-1:exon
so has part: feature:4397872-4397939:-1:exon
so has part: feature:4397655-4397741:-1:exon
so has part: feature:4397079-4397133:-1:exon
so has part: feature:4396344-4396544:-1:exon
so has part: feature:4392171-4392231:-1:exon
so has part: feature:4389342-4389493:-1:exon
so has part: feature:4385582-4385641:-1:exon
so has part: feature:4385285-4385344:-1:exon
so has part: feature:4385144-4385191:-1:exon
so has part: feature:4384936-4385010:-1:exon
so has part: feature:4384178-4384341:-1:exon
so has part: feature:4382095-4382197:-1:exon
so has part: feature:4372361-4372444:-1:exon
so has part: feature:4371861-4371944:-1:exon
so has part: feature:4371350-4371427:-1:exon
so has part: feature:4370618-4370713:-1:exon
so has part: feature:4361134-4361265:-1:exon
so has part: feature:4359211-4359276:-1:exon
so has part: feature:4358905-4359130:-1:exon
so has part: feature:4356070-4356222:-1:exon
so has part: feature:4346591-4346767:-1:exon
so has part: feature:4344093-4344213:-1:exon
so has part: feature:4338924-4339012:-1:exon
so has part: feature:4337734-4337981:-1:exon
so has part: feature:4333976-4334127:-1:exon
so has part: feature:4331641-4331831:-1:exon
so has part: feature:4330593-4330723:-1:exon
so has part: feature:4330294-4330426:-1:exon
so has part: feature:4324037-4324050:-1:exon

XP_032326651.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4406400-4406516:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4405892-4405988:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4403293-4403390:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4400056-4400139:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4397872-4397939:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4397655-4397741:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4397079-4397133:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4396344-4396544:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4392171-4392231:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4389342-4389493:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:4385582-4385641:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:4385285-4385344:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:4385144-4385191:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:4384936-4385010:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:4384178-4384341:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:4382095-4382197:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:4372361-4372444:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:4371861-4371944:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:4371350-4371427:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:4370618-4370713:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:4361134-4361265:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:4359211-4359276:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:4358905-4359130:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:4356070-4356222:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:4346591-4346767:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:4344093-4344213:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:4338924-4339012:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:4337734-4337981:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:4333976-4334127:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:4331641-4331831:-1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:4330593-4330723:-1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:4330294-4330426:-1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:4324037-4324050:-1:exon

NEK1
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 419612
gene: NEK1
product: NIMA related kinase 1, transcript variant X8
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
transcript id: XR_004316313.1
SIO_010081: NEK1
so part of: NEK1
location: complement(join(4344099..4344213,4345197..4345317,4346591..4346767,4356070..4356222,4358905..4359130,4359211..4359276,4361134..4361265,4370618..4370713,4371350..4371427,4371861..4371944,4372361..4372444,4382095..4382197,4384178..4384341,4384936..4385010,4385144..4385191,4385285..4385344,4385582..4385641,4389342..4389493,4392171..4392231,4396344..4396544,4397079..4397133,4397655..4397741,4397872..4397939,4400056..4400139,4403293..4403390,4405892..4405988,4406400..4406544,4411646..4412114))
location: region:4344099-4412114:-1
so has part: feature:4411646-4412114:-1:exon
so has part: feature:4406400-4406544:-1:exon
so has part: feature:4405892-4405988:-1:exon
so has part: feature:4403293-4403390:-1:exon
so has part: feature:4400056-4400139:-1:exon
so has part: feature:4397872-4397939:-1:exon
so has part: feature:4397655-4397741:-1:exon
so has part: feature:4397079-4397133:-1:exon
so has part: feature:4396344-4396544:-1:exon
so has part: feature:4392171-4392231:-1:exon
so has part: feature:4389342-4389493:-1:exon
so has part: feature:4385582-4385641:-1:exon
so has part: feature:4385285-4385344:-1:exon
so has part: feature:4385144-4385191:-1:exon
so has part: feature:4384936-4385010:-1:exon
so has part: feature:4384178-4384341:-1:exon
so has part: feature:4382095-4382197:-1:exon
so has part: feature:4372361-4372444:-1:exon
so has part: feature:4371861-4371944:-1:exon
so has part: feature:4371350-4371427:-1:exon
so has part: feature:4370618-4370713:-1:exon
so has part: feature:4361134-4361265:-1:exon
so has part: feature:4359211-4359276:-1:exon
so has part: feature:4358905-4359130:-1:exon
so has part: feature:4356070-4356222:-1:exon
so has part: feature:4346591-4346767:-1:exon
so has part: feature:4345197-4345317:-1:exon
so has part: feature:4344099-4344213:-1:exon

position:4344099:-1
position: 4344099
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4412114:-1
position: 4412114
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4411646-4412114:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4406400-4406544:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4405892-4405988:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4403293-4403390:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4400056-4400139:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4397872-4397939:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4397655-4397741:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4397079-4397133:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4396344-4396544:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4392171-4392231:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:4389342-4389493:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:4385582-4385641:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:4385285-4385344:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:4385144-4385191:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:4384936-4385010:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:4384178-4384341:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:4382095-4382197:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:4372361-4372444:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:4371861-4371944:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:4371350-4371427:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:4370618-4370713:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:4361134-4361265:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:4359211-4359276:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:4358905-4359130:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:4356070-4356222:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:4346591-4346767:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:4345197-4345317:-1:exon

position:4345197:-1
position: 4345197
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4345317:-1
position: 4345317
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 28
SIO_000628: feature:4344099-4344213:-1:exon

CLCN3
type: Gene
subclass of: SO_0000704
RO_0002162: 419612
gene: CLCN3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 4417153..4485155
location: region:4417153-4485155:1
so has part: feature:4417153-4485155:1:exon
subclass of: SO_0000010

102516696
type: Gene
SIO_000068: ncbigene

position:4417153:1
position: 4417153
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4485155:1
position: 4485155
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4417153-4485155:1:exon

CLCN3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 419612
gene: CLCN3
product: chloride voltage-gated channel 3, transcript variant X7
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 16 samples with support for all annotated introns
transcript id: XM_032471007.1
SIO_010081: CLCN3
subclass of: SO_0000673
so part of: CLCN3
location: join(4417153..4417577,4426030..4426205,4456490..4456647,4459405..4459504,4460740..4460927,4461924..4462046,4463185..4463391,4465404..4465484,4466436..4466981,4468900..4469086,4476877..4477093,4480776..4480851,4482413..4485155)
location: region:4417153-4485155:1
so has part: feature:4417153-4417577:1:exon
so has part: feature:4426030-4426205:1:exon
so has part: feature:4456490-4456647:1:exon
so has part: feature:4459405-4459504:1:exon
so has part: feature:4460740-4460927:1:exon
so has part: feature:4461924-4462046:1:exon
so has part: feature:4463185-4463391:1:exon
so has part: feature:4465404-4465484:1:exon
so has part: feature:4466436-4466981:1:exon
so has part: feature:4468900-4469086:1:exon
so has part: feature:4476877-4477093:1:exon
so has part: feature:4480776-4480851:1:exon
so has part: feature:4482413-4485155:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4417153-4417577:1:exon

position:4417577:1
position: 4417577
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4426030-4426205:1:exon

position:4426030:1
position: 4426030
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4426205:1
position: 4426205
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4456490-4456647:1:exon

position:4456490:1
position: 4456490
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4456647:1
position: 4456647
reference: sequence
type: ForwardStrandPosition
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urn:…
SIO_000300: 4
SIO_000628: feature:4459405-4459504:1:exon

position:4459405:1
position: 4459405
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4459504:1
position: 4459504
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:4460740-4460927:1:exon

position:4460740:1
position: 4460740
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4460927:1
position: 4460927
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:4461924-4462046:1:exon

position:4461924:1
position: 4461924
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4462046:1
position: 4462046
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:4463185-4463391:1:exon

position:4463185:1
position: 4463185
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4463391:1
position: 4463391
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:4465404-4465484:1:exon

position:4465404:1
position: 4465404
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4465484:1
position: 4465484
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:4466436-4466981:1:exon

position:4466436:1
position: 4466436
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4466981:1
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reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:4468900-4469086:1:exon

position:4468900:1
position: 4468900
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4469086:1
position: 4469086
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:4476877-4477093:1:exon

position:4476877:1
position: 4476877
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4477093:1
position: 4477093
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:4480776-4480851:1:exon

position:4480776:1
position: 4480776
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4480851:1
position: 4480851
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:4482413-4485155:1:exon

position:4482413:1
position: 4482413
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

CLCN3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 419612
gene: CLCN3
product: chloride voltage-gated channel 3, transcript variant X8
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 30 samples with support for all annotated introns
transcript id: XM_032471008.1
SIO_010081: CLCN3
subclass of: SO_0000673
so part of: CLCN3
location: join(4417154..4417577,4426030..4426205,4456490..4456647,4459405..4459504,4460740..4460927,4461924..4462046,4463185..4463391,4465404..4465484,4466436..4466981,4468900..4469086,4471444..4471842,4482413..4482577)
location: region:4417154-4482577:1
so has part: feature:4417154-4417577:1:exon
so has part: feature:4426030-4426205:1:exon
so has part: feature:4456490-4456647:1:exon
so has part: feature:4459405-4459504:1:exon
so has part: feature:4460740-4460927:1:exon
so has part: feature:4461924-4462046:1:exon
so has part: feature:4463185-4463391:1:exon
so has part: feature:4465404-4465484:1:exon
so has part: feature:4466436-4466981:1:exon
so has part: feature:4468900-4469086:1:exon
so has part: feature:4471444-4471842:1:exon
so has part: feature:4482413-4482577:1:exon

position:4417154:1
position: 4417154
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4482577:1
position: 4482577
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4417154-4417577:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4426030-4426205:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4456490-4456647:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4459405-4459504:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4460740-4460927:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4461924-4462046:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4463185-4463391:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4465404-4465484:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4466436-4466981:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4468900-4469086:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:4471444-4471842:1:exon

position:4471444:1
position: 4471444
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4471842:1
position: 4471842
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:4482413-4482577:1:exon

CLCN3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 419612
gene: CLCN3
product: chloride voltage-gated channel 3, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 10 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 30 samples with support for all annotated introns
transcript id: XM_032471001.1
SIO_010081: CLCN3
subclass of: SO_0000673
so part of: CLCN3
location: join(4417155..4417577,4426030..4426205,4456490..4456647,4459405..4459504,4460740..4460927,4461924..4462046,4463185..4463391,4465404..4465484,4466436..4466981,4468900..4469086,4471444..4471842,4476877..4477093,4480776..4480851,4482413..4485155)
location: region:4417155-4485155:1
so has part: feature:4417155-4417577:1:exon
so has part: feature:4426030-4426205:1:exon
so has part: feature:4456490-4456647:1:exon
so has part: feature:4459405-4459504:1:exon
so has part: feature:4460740-4460927:1:exon
so has part: feature:4461924-4462046:1:exon
so has part: feature:4463185-4463391:1:exon
so has part: feature:4465404-4465484:1:exon
so has part: feature:4466436-4466981:1:exon
so has part: feature:4468900-4469086:1:exon
so has part: feature:4471444-4471842:1:exon
so has part: feature:4476877-4477093:1:exon
so has part: feature:4480776-4480851:1:exon
so has part: feature:4482413-4485155:1:exon

position:4417155:1
position: 4417155
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4417155-4417577:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4426030-4426205:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4456490-4456647:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4459405-4459504:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4460740-4460927:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4461924-4462046:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4463185-4463391:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4465404-4465484:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4466436-4466981:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4468900-4469086:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:4471444-4471842:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:4476877-4477093:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:4480776-4480851:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:4482413-4485155:1:exon

CLCN3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 419612
gene: CLCN3
product: chloride voltage-gated channel 3, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 10 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 30 samples with support for all annotated introns
transcript id: XM_032471002.1
SIO_010081: CLCN3
subclass of: SO_0000673
so part of: CLCN3
location: join(4417155..4417343,4426030..4426205,4456490..4456647,4459405..4459504,4460740..4460927,4461924..4462046,4463185..4463391,4465404..4465484,4466436..4466981,4468900..4469086,4471444..4471842,4476877..4477093,4480776..4480851,4482413..4485155)
location: region:4417155-4485155:1
so has part: feature:4417155-4417343:1:exon
so has part: feature:4426030-4426205:1:exon
so has part: feature:4456490-4456647:1:exon
so has part: feature:4459405-4459504:1:exon
so has part: feature:4460740-4460927:1:exon
so has part: feature:4461924-4462046:1:exon
so has part: feature:4463185-4463391:1:exon
so has part: feature:4465404-4465484:1:exon
so has part: feature:4466436-4466981:1:exon
so has part: feature:4468900-4469086:1:exon
so has part: feature:4471444-4471842:1:exon
so has part: feature:4476877-4477093:1:exon
so has part: feature:4480776-4480851:1:exon
so has part: feature:4482413-4485155:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4417155-4417343:1:exon

position:4417343:1
position: 4417343
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4426030-4426205:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4456490-4456647:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4459405-4459504:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4460740-4460927:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4461924-4462046:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4463185-4463391:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4465404-4465484:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4466436-4466981:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4468900-4469086:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:4471444-4471842:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:4476877-4477093:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:4480776-4480851:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:4482413-4485155:1:exon

CLCN3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 419612
gene: CLCN3
product: chloride voltage-gated channel 3, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 29 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 38 samples with support for all annotated introns
transcript id: XM_032471005.1
SIO_010081: CLCN3
subclass of: SO_0000673
so part of: CLCN3
location: join(4417156..4417577,4426030..4426205,4456490..4456647,4459405..4459504,4460740..4460927,4461924..4462046,4463185..4463391,4465404..4465484,4466436..4466981,4468900..4469086,4471444..4471842,4476877..4477093,4482413..4485155)
location: region:4417156-4485155:1
so has part: feature:4417156-4417577:1:exon
so has part: feature:4426030-4426205:1:exon
so has part: feature:4456490-4456647:1:exon
so has part: feature:4459405-4459504:1:exon
so has part: feature:4460740-4460927:1:exon
so has part: feature:4461924-4462046:1:exon
so has part: feature:4463185-4463391:1:exon
so has part: feature:4465404-4465484:1:exon
so has part: feature:4466436-4466981:1:exon
so has part: feature:4468900-4469086:1:exon
so has part: feature:4471444-4471842:1:exon
so has part: feature:4476877-4477093:1:exon
so has part: feature:4482413-4485155:1:exon

position:4417156:1
position: 4417156
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4417156-4417577:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4426030-4426205:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4456490-4456647:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4459405-4459504:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4460740-4460927:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4461924-4462046:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4463185-4463391:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4465404-4465484:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4466436-4466981:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4468900-4469086:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:4471444-4471842:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:4476877-4477093:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:4482413-4485155:1:exon

CLCN3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 419612
gene: CLCN3
product: chloride voltage-gated channel 3, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 10 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 12 samples with support for all annotated introns
transcript id: XM_032471003.1
SIO_010081: CLCN3
subclass of: SO_0000673
so part of: CLCN3
location: join(4417874..4417896,4426030..4426205,4456490..4456647,4459405..4459504,4460740..4460927,4461924..4462046,4463185..4463391,4465404..4465484,4466436..4466981,4468900..4469086,4471444..4471842,4476877..4477093,4480776..4480851,4482413..4485155)
location: region:4417874-4485155:1
so has part: feature:4417874-4417896:1:exon
so has part: feature:4426030-4426205:1:exon
so has part: feature:4456490-4456647:1:exon
so has part: feature:4459405-4459504:1:exon
so has part: feature:4460740-4460927:1:exon
so has part: feature:4461924-4462046:1:exon
so has part: feature:4463185-4463391:1:exon
so has part: feature:4465404-4465484:1:exon
so has part: feature:4466436-4466981:1:exon
so has part: feature:4468900-4469086:1:exon
so has part: feature:4471444-4471842:1:exon
so has part: feature:4476877-4477093:1:exon
so has part: feature:4480776-4480851:1:exon
so has part: feature:4482413-4485155:1:exon

position:4417874:1
position: 4417874
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4417874-4417896:1:exon

position:4417896:1
position: 4417896
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4426030-4426205:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4456490-4456647:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4459405-4459504:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4460740-4460927:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4461924-4462046:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4463185-4463391:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4465404-4465484:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4466436-4466981:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4468900-4469086:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:4471444-4471842:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:4476877-4477093:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:4480776-4480851:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:4482413-4485155:1:exon

CLCN3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 419612
gene: CLCN3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: H(+)/Cl(-) exchange transporter 3 isoform X1
translation: MESEQLFHRGSYRNSYNSITSASSDEELLDGAGVIMDFQTSEDDSLLDGDAAAGTHYTMTNGGSISSSTHLLDLLDEPIPGVGTYDDFHTIDWVREKCKDRERHRRINSKKKESAWEMTKSLCDAWSGWLVVTLTGLASGALAGLIDIAADWMTDLKEGVCLSALWYNHEQCCWGSNETTFEERDKCPQWTTWAELIIGQAEGPGSYIMNYIMYIFWALSFAFLAVSLVKVFAPYACGSGIPEIKTILSGFIIRGYLGKWTLMIKTITLVLAVASGLSLGKEGPLVHVACCCGNIFSYLFPKYSTNEAKKREVLSAASAAGVSVAFGAPIGGVLFSLEEVSYYFPLKTLWRSFFAALVAAFVLRSINPFGNSRLVLFYVEYHTPWYLFELFPFILLGVFGGLWGAFFIRANIAWCRRRKSTRFGKYPVLEVIVVAAITAVIAFPNPYTRLNTSELIKELFTDCGPLESSSLCDYRNDMNASKIVDDIPDRPAGLGVYSAIWQLGLALVFKIIMTVFTFGIKVPSGLFIPSMAVGAIAGRIVGIAVEQLAYYHHDWFIFQEWCEVGADCITPGLYAMVGAAACLGGVTRMTVSLVVIVFELTGGLEYIVPLMAAVMTSKWVGDAFGREGIYEAHIRLNGYPFLDAKEEFTHTTLAADVMRPRRSDPPLAVLTQDNMTVDDIENLINETSYNGFPVITSRESQRLVGFALRRDLTIAIESARKKQEGIVGSSRVCFAQHTPSLPAESPRPLKLRSILDMSPFTVTDHTPMEIVVDIFRKLGLRQCLVTHSGTVLGIITKKNMVEHLEELARRTEPLAPPWYHNKKRYPPSYGPDGKPRSRFHHVQLSAAQEQGEGAEEEARLLDSTAL
SIO_010081: CLCN3
subclass of: SO_0000673
so part of: CLCN3
location: join(4426046..4426205,4456490..4456647,4459405..4459504,4460740..4460927,4461924..4462046,4463185..4463391,4465404..4465484,4466436..4466981,4468900..4469086,4471444..4471842,4476877..4477093,4480776..4480851,4482413..4482571)
location: region:4426046-4482571:1
so has part: feature:4426046-4426205:1:exon
so has part: feature:4456490-4456647:1:exon
so has part: feature:4459405-4459504:1:exon
so has part: feature:4460740-4460927:1:exon
so has part: feature:4461924-4462046:1:exon
so has part: feature:4463185-4463391:1:exon
so has part: feature:4465404-4465484:1:exon
so has part: feature:4466436-4466981:1:exon
so has part: feature:4468900-4469086:1:exon
so has part: feature:4471444-4471842:1:exon
so has part: feature:4476877-4477093:1:exon
so has part: feature:4480776-4480851:1:exon
so has part: feature:4482413-4482571:1:exon

XP_032326892.1
type: Protein
SIO_000068: ncbiprotein

position:4426046:1
position: 4426046
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4482571:1
position: 4482571
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4426046-4426205:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4456490-4456647:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4459405-4459504:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4460740-4460927:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4461924-4462046:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4463185-4463391:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4465404-4465484:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4466436-4466981:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4468900-4469086:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4471444-4471842:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:4476877-4477093:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:4480776-4480851:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:4482413-4482571:1:exon

CLCN3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 419612
gene: CLCN3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: H(+)/Cl(-) exchange transporter 3 isoform X1
translation: MESEQLFHRGSYRNSYNSITSASSDEELLDGAGVIMDFQTSEDDSLLDGDAAAGTHYTMTNGGSISSSTHLLDLLDEPIPGVGTYDDFHTIDWVREKCKDRERHRRINSKKKESAWEMTKSLCDAWSGWLVVTLTGLASGALAGLIDIAADWMTDLKEGVCLSALWYNHEQCCWGSNETTFEERDKCPQWTTWAELIIGQAEGPGSYIMNYIMYIFWALSFAFLAVSLVKVFAPYACGSGIPEIKTILSGFIIRGYLGKWTLMIKTITLVLAVASGLSLGKEGPLVHVACCCGNIFSYLFPKYSTNEAKKREVLSAASAAGVSVAFGAPIGGVLFSLEEVSYYFPLKTLWRSFFAALVAAFVLRSINPFGNSRLVLFYVEYHTPWYLFELFPFILLGVFGGLWGAFFIRANIAWCRRRKSTRFGKYPVLEVIVVAAITAVIAFPNPYTRLNTSELIKELFTDCGPLESSSLCDYRNDMNASKIVDDIPDRPAGLGVYSAIWQLGLALVFKIIMTVFTFGIKVPSGLFIPSMAVGAIAGRIVGIAVEQLAYYHHDWFIFQEWCEVGADCITPGLYAMVGAAACLGGVTRMTVSLVVIVFELTGGLEYIVPLMAAVMTSKWVGDAFGREGIYEAHIRLNGYPFLDAKEEFTHTTLAADVMRPRRSDPPLAVLTQDNMTVDDIENLINETSYNGFPVITSRESQRLVGFALRRDLTIAIESARKKQEGIVGSSRVCFAQHTPSLPAESPRPLKLRSILDMSPFTVTDHTPMEIVVDIFRKLGLRQCLVTHSGTVLGIITKKNMVEHLEELARRTEPLAPPWYHNKKRYPPSYGPDGKPRSRFHHVQLSAAQEQGEGAEEEARLLDSTAL
SIO_010081: CLCN3
subclass of: SO_0000673
so part of: CLCN3
location: join(4426046..4426205,4456490..4456647,4459405..4459504,4460740..4460927,4461924..4462046,4463185..4463391,4465404..4465484,4466436..4466981,4468900..4469086,4471444..4471842,4476877..4477093,4480776..4480851,4482413..4482571)
location: region:4426046-4482571:1
so has part: feature:4426046-4426205:1:exon
so has part: feature:4456490-4456647:1:exon
so has part: feature:4459405-4459504:1:exon
so has part: feature:4460740-4460927:1:exon
so has part: feature:4461924-4462046:1:exon
so has part: feature:4463185-4463391:1:exon
so has part: feature:4465404-4465484:1:exon
so has part: feature:4466436-4466981:1:exon
so has part: feature:4468900-4469086:1:exon
so has part: feature:4471444-4471842:1:exon
so has part: feature:4476877-4477093:1:exon
so has part: feature:4480776-4480851:1:exon
so has part: feature:4482413-4482571:1:exon

XP_032326893.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4426046-4426205:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4456490-4456647:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4459405-4459504:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4460740-4460927:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4461924-4462046:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4463185-4463391:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4465404-4465484:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4466436-4466981:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4468900-4469086:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4471444-4471842:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:4476877-4477093:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:4480776-4480851:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:4482413-4482571:1:exon

CLCN3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 419612
gene: CLCN3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: H(+)/Cl(-) exchange transporter 3 isoform X1
translation: MESEQLFHRGSYRNSYNSITSASSDEELLDGAGVIMDFQTSEDDSLLDGDAAAGTHYTMTNGGSISSSTHLLDLLDEPIPGVGTYDDFHTIDWVREKCKDRERHRRINSKKKESAWEMTKSLCDAWSGWLVVTLTGLASGALAGLIDIAADWMTDLKEGVCLSALWYNHEQCCWGSNETTFEERDKCPQWTTWAELIIGQAEGPGSYIMNYIMYIFWALSFAFLAVSLVKVFAPYACGSGIPEIKTILSGFIIRGYLGKWTLMIKTITLVLAVASGLSLGKEGPLVHVACCCGNIFSYLFPKYSTNEAKKREVLSAASAAGVSVAFGAPIGGVLFSLEEVSYYFPLKTLWRSFFAALVAAFVLRSINPFGNSRLVLFYVEYHTPWYLFELFPFILLGVFGGLWGAFFIRANIAWCRRRKSTRFGKYPVLEVIVVAAITAVIAFPNPYTRLNTSELIKELFTDCGPLESSSLCDYRNDMNASKIVDDIPDRPAGLGVYSAIWQLGLALVFKIIMTVFTFGIKVPSGLFIPSMAVGAIAGRIVGIAVEQLAYYHHDWFIFQEWCEVGADCITPGLYAMVGAAACLGGVTRMTVSLVVIVFELTGGLEYIVPLMAAVMTSKWVGDAFGREGIYEAHIRLNGYPFLDAKEEFTHTTLAADVMRPRRSDPPLAVLTQDNMTVDDIENLINETSYNGFPVITSRESQRLVGFALRRDLTIAIESARKKQEGIVGSSRVCFAQHTPSLPAESPRPLKLRSILDMSPFTVTDHTPMEIVVDIFRKLGLRQCLVTHSGTVLGIITKKNMVEHLEELARRTEPLAPPWYHNKKRYPPSYGPDGKPRSRFHHVQLSAAQEQGEGAEEEARLLDSTAL
SIO_010081: CLCN3
subclass of: SO_0000673
so part of: CLCN3
location: join(4426046..4426205,4456490..4456647,4459405..4459504,4460740..4460927,4461924..4462046,4463185..4463391,4465404..4465484,4466436..4466981,4468900..4469086,4471444..4471842,4476877..4477093,4480776..4480851,4482413..4482571)
location: region:4426046-4482571:1
so has part: feature:4426046-4426205:1:exon
so has part: feature:4456490-4456647:1:exon
so has part: feature:4459405-4459504:1:exon
so has part: feature:4460740-4460927:1:exon
so has part: feature:4461924-4462046:1:exon
so has part: feature:4463185-4463391:1:exon
so has part: feature:4465404-4465484:1:exon
so has part: feature:4466436-4466981:1:exon
so has part: feature:4468900-4469086:1:exon
so has part: feature:4471444-4471842:1:exon
so has part: feature:4476877-4477093:1:exon
so has part: feature:4480776-4480851:1:exon
so has part: feature:4482413-4482571:1:exon

XP_032326894.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4426046-4426205:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4456490-4456647:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4459405-4459504:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4460740-4460927:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4461924-4462046:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4463185-4463391:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4465404-4465484:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4466436-4466981:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4468900-4469086:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4471444-4471842:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:4476877-4477093:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:4480776-4480851:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:4482413-4482571:1:exon

CLCN3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 419612
gene: CLCN3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: H(+)/Cl(-) exchange transporter 3 isoform X5
translation: MESEQLFHRGSYRNSYNSITSASSDEELLDGAGVIMDFQTSEDDSLLDGDAAAGTHYTMTNGGSISSSTHLLDLLDEPIPGVGTYDDFHTIDWVREKCKDRERHRRINSKKKESAWEMTKSLCDAWSGWLVVTLTGLASGALAGLIDIAADWMTDLKEGVCLSALWYNHEQCCWGSNETTFEERDKCPQWTTWAELIIGQAEGPGSYIMNYIMYIFWALSFAFLAVSLVKVFAPYACGSGIPEIKTILSGFIIRGYLGKWTLMIKTITLVLAVASGLSLGKEGPLVHVACCCGNIFSYLFPKYSTNEAKKREVLSAASAAGVSVAFGAPIGGVLFSLEEVSYYFPLKTLWRSFFAALVAAFVLRSINPFGNSRLVLFYVEYHTPWYLFELFPFILLGVFGGLWGAFFIRANIAWCRRRKSTRFGKYPVLEVIVVAAITAVIAFPNPYTRLNTSELIKELFTDCGPLESSSLCDYRNDMNASKIVDDIPDRPAGLGVYSAIWQLGLALVFKIIMTVFTFGIKVPSGLFIPSMAVGAIAGRIVGIAVEQLAYYHHDWFIFQEWCEVGADCITPGLYAMVGAAACLESARKKQEGIVGSSRVCFAQHTPSLPAESPRPLKLRSILDMSPFTVTDHTPMEIVVDIFRKLGLRQCLVTHSGTVLGIITKKNMVEHLEELARRTEPLAPPWYHNKKRYPPSYGPDGKPRSRFHHVQLSAAQEQGEGAEEEARLLDSTAL
SIO_010081: CLCN3
subclass of: SO_0000673
so part of: CLCN3
location: join(4426046..4426205,4456490..4456647,4459405..4459504,4460740..4460927,4461924..4462046,4463185..4463391,4465404..4465484,4466436..4466981,4468900..4469086,4476877..4477093,4480776..4480851,4482413..4482571)
location: region:4426046-4482571:1
so has part: feature:4426046-4426205:1:exon
so has part: feature:4456490-4456647:1:exon
so has part: feature:4459405-4459504:1:exon
so has part: feature:4460740-4460927:1:exon
so has part: feature:4461924-4462046:1:exon
so has part: feature:4463185-4463391:1:exon
so has part: feature:4465404-4465484:1:exon
so has part: feature:4466436-4466981:1:exon
so has part: feature:4468900-4469086:1:exon
so has part: feature:4476877-4477093:1:exon
so has part: feature:4480776-4480851:1:exon
so has part: feature:4482413-4482571:1:exon

XP_032326898.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4426046-4426205:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4456490-4456647:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4459405-4459504:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4460740-4460927:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4461924-4462046:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4463185-4463391:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4465404-4465484:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4466436-4466981:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4468900-4469086:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4476877-4477093:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:4480776-4480851:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:4482413-4482571:1:exon

CLCN3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 419612
gene: CLCN3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: H(+)/Cl(-) exchange transporter 3 isoform X3
translation: MESEQLFHRGSYRNSYNSITSASSDEELLDGAGVIMDFQTSEDDSLLDGDAAAGTHYTMTNGGSISSSTHLLDLLDEPIPGVGTYDDFHTIDWVREKCKDRERHRRINSKKKESAWEMTKSLCDAWSGWLVVTLTGLASGALAGLIDIAADWMTDLKEGVCLSALWYNHEQCCWGSNETTFEERDKCPQWTTWAELIIGQAEGPGSYIMNYIMYIFWALSFAFLAVSLVKVFAPYACGSGIPEIKTILSGFIIRGYLGKWTLMIKTITLVLAVASGLSLGKEGPLVHVACCCGNIFSYLFPKYSTNEAKKREVLSAASAAGVSVAFGAPIGGVLFSLEEVSYYFPLKTLWRSFFAALVAAFVLRSINPFGNSRLVLFYVEYHTPWYLFELFPFILLGVFGGLWGAFFIRANIAWCRRRKSTRFGKYPVLEVIVVAAITAVIAFPNPYTRLNTSELIKELFTDCGPLESSSLCDYRNDMNASKIVDDIPDRPAGLGVYSAIWQLGLALVFKIIMTVFTFGIKVPSGLFIPSMAVGAIAGRIVGIAVEQLAYYHHDWFIFQEWCEVGADCITPGLYAMVGAAACLGGVTRMTVSLVVIVFELTGGLEYIVPLMAAVMTSKWVGDAFGREGIYEAHIRLNGYPFLDAKEEFTHTTLAADVMRPRRSDPPLAVLTQDNMTVDDIENLINETSYNGFPVITSRESQRLVGFALRRDLTIAIESARKKQEGIVGSSRVCFAQHTPSLPAESPRPLKLRSILDMSPFTVTDHTPMEIVVDIFRKLGLRQCLVTHSGRLLGIITKKDILRHMAQTANQDPASIMFN
SIO_010081: CLCN3
subclass of: SO_0000673
so part of: CLCN3
location: join(4426046..4426205,4456490..4456647,4459405..4459504,4460740..4460927,4461924..4462046,4463185..4463391,4465404..4465484,4466436..4466981,4468900..4469086,4471444..4471842,4476877..4477093,4482413..4482503)
location: region:4426046-4482503:1
so has part: feature:4426046-4426205:1:exon
so has part: feature:4456490-4456647:1:exon
so has part: feature:4459405-4459504:1:exon
so has part: feature:4460740-4460927:1:exon
so has part: feature:4461924-4462046:1:exon
so has part: feature:4463185-4463391:1:exon
so has part: feature:4465404-4465484:1:exon
so has part: feature:4466436-4466981:1:exon
so has part: feature:4468900-4469086:1:exon
so has part: feature:4471444-4471842:1:exon
so has part: feature:4476877-4477093:1:exon
so has part: feature:4482413-4482503:1:exon

XP_032326896.1
type: Protein
SIO_000068: ncbiprotein

position:4482503:1
position: 4482503
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4426046-4426205:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4456490-4456647:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4459405-4459504:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4460740-4460927:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4461924-4462046:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4463185-4463391:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4465404-4465484:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4466436-4466981:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4468900-4469086:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4471444-4471842:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:4476877-4477093:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:4482413-4482503:1:exon

CLCN3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 419612
gene: CLCN3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: H(+)/Cl(-) exchange transporter 3 isoform X6
translation: MESEQLFHRGSYRNSYNSITSASSDEELLDGAGVIMDFQTSEDDSLLDGDAAAGTHYTMTNGGSISSSTHLLDLLDEPIPGVGTYDDFHTIDWVREKCKDRERHRRINSKKKESAWEMTKSLCDAWSGWLVVTLTGLASGALAGLIDIAADWMTDLKEGVCLSALWYNHEQCCWGSNETTFEERDKCPQWTTWAELIIGQAEGPGSYIMNYIMYIFWALSFAFLAVSLVKVFAPYACGSGIPEIKTILSGFIIRGYLGKWTLMIKTITLVLAVASGLSLGKEGPLVHVACCCGNIFSYLFPKYSTNEAKKREVLSAASAAGVSVAFGAPIGGVLFSLEEVSYYFPLKTLWRSFFAALVAAFVLRSINPFGNSRLVLFYVEYHTPWYLFELFPFILLGVFGGLWGAFFIRANIAWCRRRKSTRFGKYPVLEVIVVAAITAVIAFPNPYTRLNTSELIKELFTDCGPLESSSLCDYRNDMNASKIVDDIPDRPAGLGVYSAIWQLGLALVFKIIMTVFTFGIKVPSGLFIPSMAVGAIAGRIVGIAVEQLAYYHHDWFIFQEWCEVGADCITPGLYAMVGAAACLGGVTRMTVSLVVIVFELTGGLEYIVPLMAAVMTSKWVGDAFGREGIYEAHIRLNGYPFLDAKEEFTHTTLAADVMRPRRSDPPLAVLTQDNMTVDDIENLINETSYNGFPVITSRESQRLVGFALRRDLTIAIGASLVS
SIO_010081: CLCN3
subclass of: SO_0000673
so part of: CLCN3
location: join(4426046..4426205,4456490..4456647,4459405..4459504,4460740..4460927,4461924..4462046,4463185..4463391,4465404..4465484,4466436..4466981,4468900..4469086,4471444..4471842,4482413..4482432)
location: region:4426046-4482432:1
so has part: feature:4426046-4426205:1:exon
so has part: feature:4456490-4456647:1:exon
so has part: feature:4459405-4459504:1:exon
so has part: feature:4460740-4460927:1:exon
so has part: feature:4461924-4462046:1:exon
so has part: feature:4463185-4463391:1:exon
so has part: feature:4465404-4465484:1:exon
so has part: feature:4466436-4466981:1:exon
so has part: feature:4468900-4469086:1:exon
so has part: feature:4471444-4471842:1:exon
so has part: feature:4482413-4482432:1:exon

XP_032326899.1
type: Protein
SIO_000068: ncbiprotein

position:4482432:1
position: 4482432
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4426046-4426205:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4456490-4456647:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4459405-4459504:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4460740-4460927:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4461924-4462046:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4463185-4463391:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4465404-4465484:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4466436-4466981:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4468900-4469086:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4471444-4471842:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:4482413-4482432:1:exon

CLCN3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 419612
gene: CLCN3
product: chloride voltage-gated channel 3, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 31 samples with support for all annotated introns
transcript id: XM_032471004.1
SIO_010081: CLCN3
subclass of: SO_0000673
so part of: CLCN3
location: join(4444623..4444810,4456490..4456647,4459405..4459504,4460740..4460927,4461924..4462046,4463185..4463391,4465404..4465484,4466436..4466981,4468900..4469086,4471444..4471842,4476877..4477093,4480776..4480851,4482413..4485155)
location: region:4444623-4485155:1
so has part: feature:4444623-4444810:1:exon
so has part: feature:4456490-4456647:1:exon
so has part: feature:4459405-4459504:1:exon
so has part: feature:4460740-4460927:1:exon
so has part: feature:4461924-4462046:1:exon
so has part: feature:4463185-4463391:1:exon
so has part: feature:4465404-4465484:1:exon
so has part: feature:4466436-4466981:1:exon
so has part: feature:4468900-4469086:1:exon
so has part: feature:4471444-4471842:1:exon
so has part: feature:4476877-4477093:1:exon
so has part: feature:4480776-4480851:1:exon
so has part: feature:4482413-4485155:1:exon

position:4444623:1
position: 4444623
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4444623-4444810:1:exon

position:4444810:1
position: 4444810
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4456490-4456647:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4459405-4459504:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4460740-4460927:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4461924-4462046:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4463185-4463391:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4465404-4465484:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4466436-4466981:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4468900-4469086:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4471444-4471842:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:4476877-4477093:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:4480776-4480851:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:4482413-4485155:1:exon

CLCN3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 419612
gene: CLCN3
product: chloride voltage-gated channel 3, transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 27 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 40 samples with support for all annotated introns
transcript id: XM_032471006.1
SIO_010081: CLCN3
subclass of: SO_0000673
so part of: CLCN3
location: join(4444624..4444810,4456490..4456647,4459405..4459504,4460740..4460927,4461924..4462046,4463185..4463391,4465404..4465484,4466436..4466981,4468900..4469086,4471444..4471842,4476877..4477093,4482413..4485155)
location: region:4444624-4485155:1
so has part: feature:4444624-4444810:1:exon
so has part: feature:4456490-4456647:1:exon
so has part: feature:4459405-4459504:1:exon
so has part: feature:4460740-4460927:1:exon
so has part: feature:4461924-4462046:1:exon
so has part: feature:4463185-4463391:1:exon
so has part: feature:4465404-4465484:1:exon
so has part: feature:4466436-4466981:1:exon
so has part: feature:4468900-4469086:1:exon
so has part: feature:4471444-4471842:1:exon
so has part: feature:4476877-4477093:1:exon
so has part: feature:4482413-4485155:1:exon

position:4444624:1
position: 4444624
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4444624-4444810:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4456490-4456647:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4459405-4459504:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4460740-4460927:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4461924-4462046:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4463185-4463391:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4465404-4465484:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4466436-4466981:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4468900-4469086:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4471444-4471842:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:4476877-4477093:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:4482413-4485155:1:exon

CLCN3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 419612
gene: CLCN3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: H(+)/Cl(-) exchange transporter 3 isoform X2
translation: MDAAADPYLPYDGGGDAIPLRELHKRGTHYTMTNGGSISSSTHLLDLLDEPIPGVGTYDDFHTIDWVREKCKDRERHRRINSKKKESAWEMTKSLCDAWSGWLVVTLTGLASGALAGLIDIAADWMTDLKEGVCLSALWYNHEQCCWGSNETTFEERDKCPQWTTWAELIIGQAEGPGSYIMNYIMYIFWALSFAFLAVSLVKVFAPYACGSGIPEIKTILSGFIIRGYLGKWTLMIKTITLVLAVASGLSLGKEGPLVHVACCCGNIFSYLFPKYSTNEAKKREVLSAASAAGVSVAFGAPIGGVLFSLEEVSYYFPLKTLWRSFFAALVAAFVLRSINPFGNSRLVLFYVEYHTPWYLFELFPFILLGVFGGLWGAFFIRANIAWCRRRKSTRFGKYPVLEVIVVAAITAVIAFPNPYTRLNTSELIKELFTDCGPLESSSLCDYRNDMNASKIVDDIPDRPAGLGVYSAIWQLGLALVFKIIMTVFTFGIKVPSGLFIPSMAVGAIAGRIVGIAVEQLAYYHHDWFIFQEWCEVGADCITPGLYAMVGAAACLGGVTRMTVSLVVIVFELTGGLEYIVPLMAAVMTSKWVGDAFGREGIYEAHIRLNGYPFLDAKEEFTHTTLAADVMRPRRSDPPLAVLTQDNMTVDDIENLINETSYNGFPVITSRESQRLVGFALRRDLTIAIESARKKQEGIVGSSRVCFAQHTPSLPAESPRPLKLRSILDMSPFTVTDHTPMEIVVDIFRKLGLRQCLVTHSGTVLGIITKKNMVEHLEELARRTEPLAPPWYHNKKRYPPSYGPDGKPRSRFHHVQLSAAQEQGEGAEEEARLLDSTAL
SIO_010081: CLCN3
subclass of: SO_0000673
so part of: CLCN3
location: join(4444732..4444810,4456490..4456647,4459405..4459504,4460740..4460927,4461924..4462046,4463185..4463391,4465404..4465484,4466436..4466981,4468900..4469086,4471444..4471842,4476877..4477093,4480776..4480851,4482413..4482571)
location: region:4444732-4482571:1
so has part: feature:4444732-4444810:1:exon
so has part: feature:4456490-4456647:1:exon
so has part: feature:4459405-4459504:1:exon
so has part: feature:4460740-4460927:1:exon
so has part: feature:4461924-4462046:1:exon
so has part: feature:4463185-4463391:1:exon
so has part: feature:4465404-4465484:1:exon
so has part: feature:4466436-4466981:1:exon
so has part: feature:4468900-4469086:1:exon
so has part: feature:4471444-4471842:1:exon
so has part: feature:4476877-4477093:1:exon
so has part: feature:4480776-4480851:1:exon
so has part: feature:4482413-4482571:1:exon

XP_032326895.1
type: Protein
SIO_000068: ncbiprotein

position:4444732:1
position: 4444732
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4444732-4444810:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4456490-4456647:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4459405-4459504:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4460740-4460927:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4461924-4462046:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4463185-4463391:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4465404-4465484:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4466436-4466981:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4468900-4469086:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4471444-4471842:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:4476877-4477093:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:4480776-4480851:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:4482413-4482571:1:exon

CLCN3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 419612
gene: CLCN3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: H(+)/Cl(-) exchange transporter 3 isoform X4
translation: MDAAADPYLPYDGGGDAIPLRELHKRGTHYTMTNGGSISSSTHLLDLLDEPIPGVGTYDDFHTIDWVREKCKDRERHRRINSKKKESAWEMTKSLCDAWSGWLVVTLTGLASGALAGLIDIAADWMTDLKEGVCLSALWYNHEQCCWGSNETTFEERDKCPQWTTWAELIIGQAEGPGSYIMNYIMYIFWALSFAFLAVSLVKVFAPYACGSGIPEIKTILSGFIIRGYLGKWTLMIKTITLVLAVASGLSLGKEGPLVHVACCCGNIFSYLFPKYSTNEAKKREVLSAASAAGVSVAFGAPIGGVLFSLEEVSYYFPLKTLWRSFFAALVAAFVLRSINPFGNSRLVLFYVEYHTPWYLFELFPFILLGVFGGLWGAFFIRANIAWCRRRKSTRFGKYPVLEVIVVAAITAVIAFPNPYTRLNTSELIKELFTDCGPLESSSLCDYRNDMNASKIVDDIPDRPAGLGVYSAIWQLGLALVFKIIMTVFTFGIKVPSGLFIPSMAVGAIAGRIVGIAVEQLAYYHHDWFIFQEWCEVGADCITPGLYAMVGAAACLGGVTRMTVSLVVIVFELTGGLEYIVPLMAAVMTSKWVGDAFGREGIYEAHIRLNGYPFLDAKEEFTHTTLAADVMRPRRSDPPLAVLTQDNMTVDDIENLINETSYNGFPVITSRESQRLVGFALRRDLTIAIESARKKQEGIVGSSRVCFAQHTPSLPAESPRPLKLRSILDMSPFTVTDHTPMEIVVDIFRKLGLRQCLVTHSGRLLGIITKKDILRHMAQTANQDPASIMFN
SIO_010081: CLCN3
subclass of: SO_0000673
so part of: CLCN3
location: join(4444732..4444810,4456490..4456647,4459405..4459504,4460740..4460927,4461924..4462046,4463185..4463391,4465404..4465484,4466436..4466981,4468900..4469086,4471444..4471842,4476877..4477093,4482413..4482503)
location: region:4444732-4482503:1
so has part: feature:4444732-4444810:1:exon
so has part: feature:4456490-4456647:1:exon
so has part: feature:4459405-4459504:1:exon
so has part: feature:4460740-4460927:1:exon
so has part: feature:4461924-4462046:1:exon
so has part: feature:4463185-4463391:1:exon
so has part: feature:4465404-4465484:1:exon
so has part: feature:4466436-4466981:1:exon
so has part: feature:4468900-4469086:1:exon
so has part: feature:4471444-4471842:1:exon
so has part: feature:4476877-4477093:1:exon
so has part: feature:4482413-4482503:1:exon

XP_032326897.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4444732-4444810:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4456490-4456647:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4459405-4459504:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4460740-4460927:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4461924-4462046:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4463185-4463391:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4465404-4465484:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4466436-4466981:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4468900-4469086:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4471444-4471842:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:4476877-4477093:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:4482413-4482503:1:exon

LOC102517281
type: Gene
subclass of: SO_0000704
RO_0002162: 419612
gene: LOC102517281
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(4489230..4507569)
location: region:4489230-4507569:-1
so has part: feature:4489230-4507569:-1:exon
subclass of: SO_0000010

102517281
type: Gene
SIO_000068: ncbigene

position:4489230:-1
position: 4489230
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4507569:-1
position: 4507569
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4489230-4507569:-1:exon

LOC102517281
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 419612
gene: LOC102517281
product: histone PARylation factor 1
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 2 bases in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 96% coverage of the annotated genomic feature by RNAseq alignments, including 40 samples with support for all annotated introns
transcript id: XM_032470807.1
SIO_010081: LOC102517281
subclass of: SO_0000673
so part of: LOC102517281
location: complement(join(4489230..4489460,4490740..4490912,4494376..4494463,4496418..4496568,4501126..4501224,4502262..4502448,4504313..4504472,4507509..4507569))
location: region:4489230-4507569:-1
so has part: feature:4507509-4507569:-1:exon
so has part: feature:4504313-4504472:-1:exon
so has part: feature:4502262-4502448:-1:exon
so has part: feature:4501126-4501224:-1:exon
so has part: feature:4496418-4496568:-1:exon
so has part: feature:4494376-4494463:-1:exon
so has part: feature:4490740-4490912:-1:exon
so has part: feature:4489230-4489460:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4507509-4507569:-1:exon

position:4507509:-1
position: 4507509
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4504313-4504472:-1:exon

position:4504313:-1
position: 4504313
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4504472:-1
position: 4504472
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4502262-4502448:-1:exon

position:4502262:-1
position: 4502262
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4502448:-1
position: 4502448
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:4501126-4501224:-1:exon

position:4501126:-1
position: 4501126
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4501224:-1
position: 4501224
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:4496418-4496568:-1:exon

position:4496418:-1
position: 4496418
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4496568:-1
position: 4496568
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:4494376-4494463:-1:exon

position:4494376:-1
position: 4494376
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4494463:-1
position: 4494463
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:4490740-4490912:-1:exon

position:4490740:-1
position: 4490740
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4490912:-1
position: 4490912
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:4489230-4489460:-1:exon

position:4489460:-1
position: 4489460
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC102517281
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 419612
gene: LOC102517281
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 2 bases in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: histone PARylation factor 1
translation: MVGGGGKXRPGGEGPQCEKAAAVKRSKSCAADVPSDLREEVERHYRLPLPEDFYHFWRFCEGLDPEKPADSLSASLGLRLVGPYDILAGKHKVRKPARLNCNLHWRFYYDPPELQTIIVGDGNTQFHMGYFRDSPDELPVFVGTNEAKKNCTIVQNGDNVFAAVKLFLMKKLKEVTDKKKTSLLKNIDEKLTEAARELGFSLEQRSMKMRQRDKRVVTKSFHGAGLVVPVDKNDVGYRELPETDASLRRICRTIAEAPSDDERLRAFAPVQEMVTFVQFANDECDYGMGLELGTDLFCHGSHYFHKVAGQLLPLAYNLLKRNLFAEIIEDHLAHRSKEDVDQLAA
SIO_010081: LOC102517281
subclass of: SO_0000673
so part of: LOC102517281
location: complement(join(4489329..4489460,4490740..4490912,4494376..4494463,4496418..4496568,4501126..4501224,4502262..4502448,4504313..4504472,4507509..4507554))
location: region:4489329-4507554:-1
so has part: feature:4507509-4507554:-1:exon
so has part: feature:4504313-4504472:-1:exon
so has part: feature:4502262-4502448:-1:exon
so has part: feature:4501126-4501224:-1:exon
so has part: feature:4496418-4496568:-1:exon
so has part: feature:4494376-4494463:-1:exon
so has part: feature:4490740-4490912:-1:exon
so has part: feature:4489329-4489460:-1:exon

XP_032326698.1
type: Protein
SIO_000068: ncbiprotein

position:4489329:-1
position: 4489329
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4507554:-1
position: 4507554
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4507509-4507554:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4504313-4504472:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4502262-4502448:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4501126-4501224:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4496418-4496568:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4494376-4494463:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4490740-4490912:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4489329-4489460:-1:exon

MFAP3L
type: Gene
subclass of: SO_0000704
RO_0002162: 419612
gene: MFAP3L
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(4594096..4623634)
location: region:4594096-4623634:-1
so has part: feature:4594096-4623634:-1:exon
subclass of: SO_0000010

102516278
type: Gene
SIO_000068: ncbigene

position:4594096:-1
position: 4594096
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4623634:-1
position: 4623634
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4594096-4623634:-1:exon

MFAP3L
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 419612
gene: MFAP3L
product: microfibril associated protein 3 like, transcript variant X7
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 18 samples with support for all annotated introns
transcript id: XM_032470796.1
SIO_010081: MFAP3L
subclass of: SO_0000673
so part of: MFAP3L
location: complement(join(4594096..4599795,4608762..4609175,4623381..4623634))
location: region:4594096-4623634:-1
so has part: feature:4623381-4623634:-1:exon
so has part: feature:4608762-4609175:-1:exon
so has part: feature:4594096-4599795:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4623381-4623634:-1:exon

position:4623381:-1
position: 4623381
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4608762-4609175:-1:exon

position:4608762:-1
position: 4608762
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4609175:-1
position: 4609175
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4594096-4599795:-1:exon

position:4599795:-1
position: 4599795
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

MFAP3L
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 419612
gene: MFAP3L
product: microfibril associated protein 3 like, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
transcript id: XM_032470792.1
SIO_010081: MFAP3L
subclass of: SO_0000673
so part of: MFAP3L
location: complement(join(4594096..4599795,4608762..4609175,4614397..4614691,4623381..4623634))
location: region:4594096-4623634:-1
so has part: feature:4623381-4623634:-1:exon
so has part: feature:4614397-4614691:-1:exon
so has part: feature:4608762-4609175:-1:exon
so has part: feature:4594096-4599795:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4623381-4623634:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4614397-4614691:-1:exon

position:4614397:-1
position: 4614397
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4614691:-1
position: 4614691
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4608762-4609175:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4594096-4599795:-1:exon

MFAP3L
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 419612
gene: MFAP3L
product: microfibril associated protein 3 like, transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 18 samples with support for all annotated introns
transcript id: XM_032470795.1
SIO_010081: MFAP3L
subclass of: SO_0000673
so part of: MFAP3L
location: complement(join(4594096..4599795,4608762..4609175,4622937..4623127))
location: region:4594096-4623127:-1
so has part: feature:4622937-4623127:-1:exon
so has part: feature:4608762-4609175:-1:exon
so has part: feature:4594096-4599795:-1:exon

position:4623127:-1
position: 4623127
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4622937-4623127:-1:exon

position:4622937:-1
position: 4622937
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4608762-4609175:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4594096-4599795:-1:exon

MFAP3L
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 419612
gene: MFAP3L
product: microfibril associated protein 3 like, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
transcript id: XM_032470793.1
SIO_010081: MFAP3L
subclass of: SO_0000673
so part of: MFAP3L
location: complement(join(4594096..4599795,4608762..4609175,4614397..4614691,4622937..4623127))
location: region:4594096-4623127:-1
so has part: feature:4622937-4623127:-1:exon
so has part: feature:4614397-4614691:-1:exon
so has part: feature:4608762-4609175:-1:exon
so has part: feature:4594096-4599795:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4622937-4623127:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4614397-4614691:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4608762-4609175:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4594096-4599795:-1:exon

MFAP3L
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 419612
gene: MFAP3L
product: microfibril associated protein 3 like, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_032470794.1
SIO_010081: MFAP3L
subclass of: SO_0000673
so part of: MFAP3L
location: complement(join(4594096..4599795,4608762..4609175,4614397..4614691,4616697..4617039))
location: region:4594096-4617039:-1
so has part: feature:4616697-4617039:-1:exon
so has part: feature:4614397-4614691:-1:exon
so has part: feature:4608762-4609175:-1:exon
so has part: feature:4594096-4599795:-1:exon

position:4617039:-1
position: 4617039
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4616697-4617039:-1:exon

position:4616697:-1
position: 4616697
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4614397-4614691:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4608762-4609175:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4594096-4599795:-1:exon

MFAP3L
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 419612
gene: MFAP3L
product: microfibril associated protein 3 like, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 15 samples with support for all annotated introns
transcript id: XM_006181369.3
SIO_010081: MFAP3L
subclass of: SO_0000673
so part of: MFAP3L
location: complement(join(4594096..4599795,4608762..4609175,4614397..4616169))
location: region:4594096-4616169:-1
so has part: feature:4614397-4616169:-1:exon
so has part: feature:4608762-4609175:-1:exon
so has part: feature:4594096-4599795:-1:exon

position:4616169:-1
position: 4616169
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4614397-4616169:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4608762-4609175:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4594096-4599795:-1:exon

MFAP3L
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 419612
gene: MFAP3L
product: microfibril associated protein 3 like, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_032470791.1
SIO_010081: MFAP3L
subclass of: SO_0000673
so part of: MFAP3L
location: complement(join(4594096..4599795,4608762..4609175,4614397..4614691,4614790..4614809))
location: region:4594096-4614809:-1
so has part: feature:4614790-4614809:-1:exon
so has part: feature:4614397-4614691:-1:exon
so has part: feature:4608762-4609175:-1:exon
so has part: feature:4594096-4599795:-1:exon

position:4614809:-1
position: 4614809
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4614790-4614809:-1:exon

position:4614790:-1
position: 4614790
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4614397-4614691:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4608762-4609175:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4594096-4599795:-1:exon

MFAP3L
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 419612
gene: MFAP3L
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: microfibrillar-associated protein 3-like
translation: MGGSRSLLPVCFLPSVPFLILASTLATAKSLANSTLNGTDVVAGSAPVVTARTDHVIVREGNSALINCSVSGVPEPQFRWYNSIGKLLEEEEREGGKWQMHSGLLNITQVSFSDRGKYTCVASNAHGSANNSVTLRVVFTSGDMGVYYMVVCLVAFTVVLVLNVTRLCMMSSHLKKTEKAINEFFRTEGAEKLQKAFEIAKRIPIITSAKTLELAKVTQFKTMEFARYIEELARSVPLPPLIMNCRTIMEDILEVVGLEEQGQNFVRHAPEGQEAADGDEVYTIPDSPKRSDSPTGDSDASSLPEHPQQIAIKVSVHPPSRREHADAHEGAPFPAGEEEDTEPSAERSPESAEPSTDVTSAALTSEEPTPVEVSDRVLPPPLLEAAEPAGAQDRDACVVYESHV
SIO_010081: MFAP3L
subclass of: SO_0000673
so part of: MFAP3L
location: complement(join(4598867..4599795,4608762..4609047))
location: region:4598867-4609047:-1
so has part: feature:4608762-4609047:-1:exon
so has part: feature:4598867-4599795:-1:exon

XP_006181431.2
type: Protein
SIO_000068: ncbiprotein

position:4598867:-1
position: 4598867
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4609047:-1
position: 4609047
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4608762-4609047:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4598867-4599795:-1:exon

MFAP3L
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 419612
gene: MFAP3L
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: microfibrillar-associated protein 3-like
translation: MGGSRSLLPVCFLPSVPFLILASTLATAKSLANSTLNGTDVVAGSAPVVTARTDHVIVREGNSALINCSVSGVPEPQFRWYNSIGKLLEEEEREGGKWQMHSGLLNITQVSFSDRGKYTCVASNAHGSANNSVTLRVVFTSGDMGVYYMVVCLVAFTVVLVLNVTRLCMMSSHLKKTEKAINEFFRTEGAEKLQKAFEIAKRIPIITSAKTLELAKVTQFKTMEFARYIEELARSVPLPPLIMNCRTIMEDILEVVGLEEQGQNFVRHAPEGQEAADGDEVYTIPDSPKRSDSPTGDSDASSLPEHPQQIAIKVSVHPPSRREHADAHEGAPFPAGEEEDTEPSAERSPESAEPSTDVTSAALTSEEPTPVEVSDRVLPPPLLEAAEPAGAQDRDACVVYESHV
SIO_010081: MFAP3L
subclass of: SO_0000673
so part of: MFAP3L
location: complement(join(4598867..4599795,4608762..4609047))
location: region:4598867-4609047:-1
so has part: feature:4608762-4609047:-1:exon
so has part: feature:4598867-4599795:-1:exon

XP_032326682.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4608762-4609047:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4598867-4599795:-1:exon

MFAP3L
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 419612
gene: MFAP3L
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: microfibrillar-associated protein 3-like
translation: MGGSRSLLPVCFLPSVPFLILASTLATAKSLANSTLNGTDVVAGSAPVVTARTDHVIVREGNSALINCSVSGVPEPQFRWYNSIGKLLEEEEREGGKWQMHSGLLNITQVSFSDRGKYTCVASNAHGSANNSVTLRVVFTSGDMGVYYMVVCLVAFTVVLVLNVTRLCMMSSHLKKTEKAINEFFRTEGAEKLQKAFEIAKRIPIITSAKTLELAKVTQFKTMEFARYIEELARSVPLPPLIMNCRTIMEDILEVVGLEEQGQNFVRHAPEGQEAADGDEVYTIPDSPKRSDSPTGDSDASSLPEHPQQIAIKVSVHPPSRREHADAHEGAPFPAGEEEDTEPSAERSPESAEPSTDVTSAALTSEEPTPVEVSDRVLPPPLLEAAEPAGAQDRDACVVYESHV
SIO_010081: MFAP3L
subclass of: SO_0000673
so part of: MFAP3L
location: complement(join(4598867..4599795,4608762..4609047))
location: region:4598867-4609047:-1
so has part: feature:4608762-4609047:-1:exon
so has part: feature:4598867-4599795:-1:exon

XP_032326683.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4608762-4609047:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4598867-4599795:-1:exon

MFAP3L
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 419612
gene: MFAP3L
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: microfibrillar-associated protein 3-like
translation: MGGSRSLLPVCFLPSVPFLILASTLATAKSLANSTLNGTDVVAGSAPVVTARTDHVIVREGNSALINCSVSGVPEPQFRWYNSIGKLLEEEEREGGKWQMHSGLLNITQVSFSDRGKYTCVASNAHGSANNSVTLRVVFTSGDMGVYYMVVCLVAFTVVLVLNVTRLCMMSSHLKKTEKAINEFFRTEGAEKLQKAFEIAKRIPIITSAKTLELAKVTQFKTMEFARYIEELARSVPLPPLIMNCRTIMEDILEVVGLEEQGQNFVRHAPEGQEAADGDEVYTIPDSPKRSDSPTGDSDASSLPEHPQQIAIKVSVHPPSRREHADAHEGAPFPAGEEEDTEPSAERSPESAEPSTDVTSAALTSEEPTPVEVSDRVLPPPLLEAAEPAGAQDRDACVVYESHV
SIO_010081: MFAP3L
subclass of: SO_0000673
so part of: MFAP3L
location: complement(join(4598867..4599795,4608762..4609047))
location: region:4598867-4609047:-1
so has part: feature:4608762-4609047:-1:exon
so has part: feature:4598867-4599795:-1:exon

XP_032326684.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4608762-4609047:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4598867-4599795:-1:exon

MFAP3L
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 419612
gene: MFAP3L
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: microfibrillar-associated protein 3-like
translation: MGGSRSLLPVCFLPSVPFLILASTLATAKSLANSTLNGTDVVAGSAPVVTARTDHVIVREGNSALINCSVSGVPEPQFRWYNSIGKLLEEEEREGGKWQMHSGLLNITQVSFSDRGKYTCVASNAHGSANNSVTLRVVFTSGDMGVYYMVVCLVAFTVVLVLNVTRLCMMSSHLKKTEKAINEFFRTEGAEKLQKAFEIAKRIPIITSAKTLELAKVTQFKTMEFARYIEELARSVPLPPLIMNCRTIMEDILEVVGLEEQGQNFVRHAPEGQEAADGDEVYTIPDSPKRSDSPTGDSDASSLPEHPQQIAIKVSVHPPSRREHADAHEGAPFPAGEEEDTEPSAERSPESAEPSTDVTSAALTSEEPTPVEVSDRVLPPPLLEAAEPAGAQDRDACVVYESHV
SIO_010081: MFAP3L
subclass of: SO_0000673
so part of: MFAP3L
location: complement(join(4598867..4599795,4608762..4609047))
location: region:4598867-4609047:-1
so has part: feature:4608762-4609047:-1:exon
so has part: feature:4598867-4599795:-1:exon

XP_032326685.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4608762-4609047:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4598867-4599795:-1:exon

MFAP3L
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 419612
gene: MFAP3L
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: microfibrillar-associated protein 3-like
translation: MGGSRSLLPVCFLPSVPFLILASTLATAKSLANSTLNGTDVVAGSAPVVTARTDHVIVREGNSALINCSVSGVPEPQFRWYNSIGKLLEEEEREGGKWQMHSGLLNITQVSFSDRGKYTCVASNAHGSANNSVTLRVVFTSGDMGVYYMVVCLVAFTVVLVLNVTRLCMMSSHLKKTEKAINEFFRTEGAEKLQKAFEIAKRIPIITSAKTLELAKVTQFKTMEFARYIEELARSVPLPPLIMNCRTIMEDILEVVGLEEQGQNFVRHAPEGQEAADGDEVYTIPDSPKRSDSPTGDSDASSLPEHPQQIAIKVSVHPPSRREHADAHEGAPFPAGEEEDTEPSAERSPESAEPSTDVTSAALTSEEPTPVEVSDRVLPPPLLEAAEPAGAQDRDACVVYESHV
SIO_010081: MFAP3L
subclass of: SO_0000673
so part of: MFAP3L
location: complement(join(4598867..4599795,4608762..4609047))
location: region:4598867-4609047:-1
so has part: feature:4608762-4609047:-1:exon
so has part: feature:4598867-4599795:-1:exon

XP_032326686.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4608762-4609047:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4598867-4599795:-1:exon

MFAP3L
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 419612
gene: MFAP3L
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: microfibrillar-associated protein 3-like
translation: MGGSRSLLPVCFLPSVPFLILASTLATAKSLANSTLNGTDVVAGSAPVVTARTDHVIVREGNSALINCSVSGVPEPQFRWYNSIGKLLEEEEREGGKWQMHSGLLNITQVSFSDRGKYTCVASNAHGSANNSVTLRVVFTSGDMGVYYMVVCLVAFTVVLVLNVTRLCMMSSHLKKTEKAINEFFRTEGAEKLQKAFEIAKRIPIITSAKTLELAKVTQFKTMEFARYIEELARSVPLPPLIMNCRTIMEDILEVVGLEEQGQNFVRHAPEGQEAADGDEVYTIPDSPKRSDSPTGDSDASSLPEHPQQIAIKVSVHPPSRREHADAHEGAPFPAGEEEDTEPSAERSPESAEPSTDVTSAALTSEEPTPVEVSDRVLPPPLLEAAEPAGAQDRDACVVYESHV
SIO_010081: MFAP3L
subclass of: SO_0000673
so part of: MFAP3L
location: complement(join(4598867..4599795,4608762..4609047))
location: region:4598867-4609047:-1
so has part: feature:4608762-4609047:-1:exon
so has part: feature:4598867-4599795:-1:exon

XP_032326687.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4608762-4609047:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4598867-4599795:-1:exon

AADAT
type: Gene
subclass of: SO_0000704
RO_0002162: 419612
gene: AADAT
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(4636751..4661634)
location: region:4636751-4661634:-1
so has part: feature:4636751-4661634:-1:exon
subclass of: SO_0000010

102515842
type: Gene
SIO_000068: ncbigene

position:4636751:-1
position: 4636751
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4661634:-1
position: 4661634
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4636751-4661634:-1:exon

AADAT
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 419612
gene: AADAT
product: aminoadipate aminotransferase, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_006181368.3
SIO_010081: AADAT
subclass of: SO_0000673
so part of: AADAT
location: complement(join(4636751..4637137,4638071..4638172,4642398..4642504,4643773..4643837,4644106..4644167,4645390..4645486,4645938..4646020,4647262..4647327,4649095..4649304,4653018..4653092,4656498..4656630,4657619..4657787,4658331..4658441,4661307..4661634))
location: region:4636751-4661634:-1
so has part: feature:4661307-4661634:-1:exon
so has part: feature:4658331-4658441:-1:exon
so has part: feature:4657619-4657787:-1:exon
so has part: feature:4656498-4656630:-1:exon
so has part: feature:4653018-4653092:-1:exon
so has part: feature:4649095-4649304:-1:exon
so has part: feature:4647262-4647327:-1:exon
so has part: feature:4645938-4646020:-1:exon
so has part: feature:4645390-4645486:-1:exon
so has part: feature:4644106-4644167:-1:exon
so has part: feature:4643773-4643837:-1:exon
so has part: feature:4642398-4642504:-1:exon
so has part: feature:4638071-4638172:-1:exon
so has part: feature:4636751-4637137:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4661307-4661634:-1:exon

position:4661307:-1
position: 4661307
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4658331-4658441:-1:exon

position:4658331:-1
position: 4658331
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4658441:-1
position: 4658441
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4657619-4657787:-1:exon

position:4657619:-1
position: 4657619
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4657787:-1
position: 4657787
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:4656498-4656630:-1:exon

position:4656498:-1
position: 4656498
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4656630:-1
position: 4656630
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:4653018-4653092:-1:exon

position:4653018:-1
position: 4653018
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4653092:-1
position: 4653092
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:4649095-4649304:-1:exon

position:4649095:-1
position: 4649095
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4649304:-1
position: 4649304
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:4647262-4647327:-1:exon

position:4647262:-1
position: 4647262
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4647327:-1
position: 4647327
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:4645938-4646020:-1:exon

position:4645938:-1
position: 4645938
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4646020:-1
position: 4646020
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:4645390-4645486:-1:exon

position:4645390:-1
position: 4645390
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4645486:-1
position: 4645486
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:4644106-4644167:-1:exon

position:4644106:-1
position: 4644106
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4644167:-1
position: 4644167
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:4643773-4643837:-1:exon

position:4643773:-1
position: 4643773
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4643837:-1
position: 4643837
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:4642398-4642504:-1:exon

position:4642398:-1
position: 4642398
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4642504:-1
position: 4642504
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:4638071-4638172:-1:exon

position:4638071:-1
position: 4638071
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4638172:-1
position: 4638172
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:4636751-4637137:-1:exon

position:4637137:-1
position: 4637137
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

AADAT
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 419612
gene: AADAT
product: aminoadipate aminotransferase, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_032470847.1
SIO_010081: AADAT
subclass of: SO_0000673
so part of: AADAT
location: complement(join(4636751..4637137,4638071..4638172,4642398..4642504,4643773..4643837,4644106..4644167,4645390..4645486,4645938..4646020,4647262..4647327,4649095..4649304,4653018..4653092,4656498..4656630,4657619..4657787,4658331..4658441,4658604..4658745))
location: region:4636751-4658745:-1
so has part: feature:4658604-4658745:-1:exon
so has part: feature:4658331-4658441:-1:exon
so has part: feature:4657619-4657787:-1:exon
so has part: feature:4656498-4656630:-1:exon
so has part: feature:4653018-4653092:-1:exon
so has part: feature:4649095-4649304:-1:exon
so has part: feature:4647262-4647327:-1:exon
so has part: feature:4645938-4646020:-1:exon
so has part: feature:4645390-4645486:-1:exon
so has part: feature:4644106-4644167:-1:exon
so has part: feature:4643773-4643837:-1:exon
so has part: feature:4642398-4642504:-1:exon
so has part: feature:4638071-4638172:-1:exon
so has part: feature:4636751-4637137:-1:exon

position:4658745:-1
position: 4658745
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4658604-4658745:-1:exon

position:4658604:-1
position: 4658604
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4658331-4658441:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4657619-4657787:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4656498-4656630:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4653018-4653092:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4649095-4649304:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4647262-4647327:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4645938-4646020:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4645390-4645486:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4644106-4644167:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:4643773-4643837:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:4642398-4642504:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:4638071-4638172:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:4636751-4637137:-1:exon

AADAT
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 419612
gene: AADAT
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: kynurenine/alpha-aminoadipate aminotransferase, mitochondrial
translation: MNYARFLTATSAARKACAIRVVADIMEKAPKSLIPLATGAPNPDTFPFKTAVITIEDGQTIQLNEQMMKTALQYSQSAGIPELLSWLKQLQVHLHNPPTIHYPSSEGQMDICVMSGSQEGLCKVFEMIINPGDNILVNEPIYAGTIHALQPLGCNIINVASDEYGIIPNSLREILSKWKPEDSKNPEKNTPKFLYTIPNGNNPTGHSLTSNRKKEIYELARKYDFLIVEDDPYYFLQFNKPWEPTFLSMDVDGRVIRADSFSKVLSSGLRIGFITGPKFLIERLVLHTQVSTLHPSTFSQVLVSQLLHQWGQEGFLAHVERVTDFYRKQKDALLEAADKWLHGLAEWHVPTAGLFLWIKIKGIDDARKLTEKKALKKEVLLVPGCGFYVDDSAPSPYFRASFSLASPEQMDVAFQRLAQLIKESL
SIO_010081: AADAT
subclass of: SO_0000673
so part of: AADAT
location: complement(join(4637096..4637137,4638071..4638172,4642398..4642504,4643773..4643837,4644106..4644167,4645390..4645486,4645938..4646020,4647262..4647327,4649095..4649304,4653018..4653092,4656498..4656630,4657619..4657787,4658331..4658397))
location: region:4637096-4658397:-1
so has part: feature:4658331-4658397:-1:exon
so has part: feature:4657619-4657787:-1:exon
so has part: feature:4656498-4656630:-1:exon
so has part: feature:4653018-4653092:-1:exon
so has part: feature:4649095-4649304:-1:exon
so has part: feature:4647262-4647327:-1:exon
so has part: feature:4645938-4646020:-1:exon
so has part: feature:4645390-4645486:-1:exon
so has part: feature:4644106-4644167:-1:exon
so has part: feature:4643773-4643837:-1:exon
so has part: feature:4642398-4642504:-1:exon
so has part: feature:4638071-4638172:-1:exon
so has part: feature:4637096-4637137:-1:exon

XP_006181430.2
type: Protein
SIO_000068: ncbiprotein

position:4637096:-1
position: 4637096
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4658397:-1
position: 4658397
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4658331-4658397:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4657619-4657787:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4656498-4656630:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4653018-4653092:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4649095-4649304:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4647262-4647327:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4645938-4646020:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4645390-4645486:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4644106-4644167:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4643773-4643837:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:4642398-4642504:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:4638071-4638172:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:4637096-4637137:-1:exon

AADAT
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 419612
gene: AADAT
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: kynurenine/alpha-aminoadipate aminotransferase, mitochondrial
translation: MNYARFLTATSAARKACAIRVVADIMEKAPKSLIPLATGAPNPDTFPFKTAVITIEDGQTIQLNEQMMKTALQYSQSAGIPELLSWLKQLQVHLHNPPTIHYPSSEGQMDICVMSGSQEGLCKVFEMIINPGDNILVNEPIYAGTIHALQPLGCNIINVASDEYGIIPNSLREILSKWKPEDSKNPEKNTPKFLYTIPNGNNPTGHSLTSNRKKEIYELARKYDFLIVEDDPYYFLQFNKPWEPTFLSMDVDGRVIRADSFSKVLSSGLRIGFITGPKFLIERLVLHTQVSTLHPSTFSQVLVSQLLHQWGQEGFLAHVERVTDFYRKQKDALLEAADKWLHGLAEWHVPTAGLFLWIKIKGIDDARKLTEKKALKKEVLLVPGCGFYVDDSAPSPYFRASFSLASPEQMDVAFQRLAQLIKESL
SIO_010081: AADAT
subclass of: SO_0000673
so part of: AADAT
location: complement(join(4637096..4637137,4638071..4638172,4642398..4642504,4643773..4643837,4644106..4644167,4645390..4645486,4645938..4646020,4647262..4647327,4649095..4649304,4653018..4653092,4656498..4656630,4657619..4657787,4658331..4658397))
location: region:4637096-4658397:-1
so has part: feature:4658331-4658397:-1:exon
so has part: feature:4657619-4657787:-1:exon
so has part: feature:4656498-4656630:-1:exon
so has part: feature:4653018-4653092:-1:exon
so has part: feature:4649095-4649304:-1:exon
so has part: feature:4647262-4647327:-1:exon
so has part: feature:4645938-4646020:-1:exon
so has part: feature:4645390-4645486:-1:exon
so has part: feature:4644106-4644167:-1:exon
so has part: feature:4643773-4643837:-1:exon
so has part: feature:4642398-4642504:-1:exon
so has part: feature:4638071-4638172:-1:exon
so has part: feature:4637096-4637137:-1:exon

XP_032326738.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4658331-4658397:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4657619-4657787:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4656498-4656630:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4653018-4653092:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4649095-4649304:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4647262-4647327:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4645938-4646020:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4645390-4645486:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4644106-4644167:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4643773-4643837:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:4642398-4642504:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:4638071-4638172:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:4637096-4637137:-1:exon

LOC116660767
type: Gene
subclass of: SO_0000704
RO_0002162: 419612
gene: LOC116660767
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 4845388..4878753
location: region:4845388-4878753:1
so has part: feature:4845388-4878753:1:exon
subclass of: SO_0000011

116660767
type: Gene
SIO_000068: ncbigene

position:4845388:1
position: 4845388
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4878753:1
position: 4878753
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4845388-4878753:1:exon

LOC116660767
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 419612
nc RNA class: lncRNA
gene: LOC116660767
product: uncharacterized LOC116660767
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XR_004316382.1
SIO_010081: LOC116660767
subclass of: SO_0000673
so part of: LOC116660767
location: join(4845388..4845784,4854538..4854735,4855402..4855547,4857405..4857521,4869330..4869407,4876419..4878753)
location: region:4845388-4878753:1
so has part: feature:4845388-4845784:1:exon
so has part: feature:4854538-4854735:1:exon
so has part: feature:4855402-4855547:1:exon
so has part: feature:4857405-4857521:1:exon
so has part: feature:4869330-4869407:1:exon
so has part: feature:4876419-4878753:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4845388-4845784:1:exon

position:4845784:1
position: 4845784
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4854538-4854735:1:exon

position:4854538:1
position: 4854538
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4854735:1
position: 4854735
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4855402-4855547:1:exon

position:4855402:1
position: 4855402
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4855547:1
position: 4855547
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:4857405-4857521:1:exon

position:4857405:1
position: 4857405
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4857521:1
position: 4857521
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:4869330-4869407:1:exon

position:4869330:1
position: 4869330
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4869407:1
position: 4869407
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:4876419-4878753:1:exon

position:4876419:1
position: 4876419
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC116660769
type: Gene
subclass of: SO_0000704
RO_0002162: 419612
gene: LOC116660769
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(4923417..4926837)
location: region:4923417-4926837:-1
so has part: feature:4923417-4926837:-1:exon
subclass of: SO_0000011

116660769
type: Gene
SIO_000068: ncbigene

position:4923417:-1
position: 4923417
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4926837:-1
position: 4926837
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4923417-4926837:-1:exon

LOC116660769
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 419612
nc RNA class: lncRNA
gene: LOC116660769
product: uncharacterized LOC116660769, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XR_004316385.1
SIO_010081: LOC116660769
subclass of: SO_0000673
so part of: LOC116660769
location: complement(join(4923417..4924073,4924769..4924964,4926343..4926530,4926690..4926837))
location: region:4923417-4926837:-1
so has part: feature:4926690-4926837:-1:exon
so has part: feature:4926343-4926530:-1:exon
so has part: feature:4924769-4924964:-1:exon
so has part: feature:4923417-4924073:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4926690-4926837:-1:exon

position:4926690:-1
position: 4926690
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4926343-4926530:-1:exon

position:4926343:-1
position: 4926343
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4926530:-1
position: 4926530
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4924769-4924964:-1:exon

position:4924769:-1
position: 4924769
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4924964:-1
position: 4924964
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:4923417-4924073:-1:exon

position:4924073:-1
position: 4924073
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC116660769
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 419612
nc RNA class: lncRNA
gene: LOC116660769
product: uncharacterized LOC116660769, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XR_004316384.1
SIO_010081: LOC116660769
subclass of: SO_0000673
so part of: LOC116660769
location: complement(join(4923417..4924073,4924769..4925167,4926343..4926530,4926690..4926837))
location: region:4923417-4926837:-1
so has part: feature:4926690-4926837:-1:exon
so has part: feature:4926343-4926530:-1:exon
so has part: feature:4924769-4925167:-1:exon
so has part: feature:4923417-4924073:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4926690-4926837:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4926343-4926530:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4924769-4925167:-1:exon

position:4925167:-1
position: 4925167
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:4923417-4924073:-1:exon

GALNTL6
type: Gene
subclass of: SO_0000704
RO_0002162: 419612
gene: GALNTL6
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 5514467..6317994
location: region:5514467-6317994:1
so has part: feature:5514467-6317994:1:exon
subclass of: SO_0000010

102506962
type: Gene
SIO_000068: ncbigene

position:5514467:1
position: 5514467
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6317994:1
position: 6317994
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5514467-6317994:1:exon

GALNTL6
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 419612
gene: GALNTL6
product: polypeptide N-acetylgalactosaminyltransferase like 6, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_032470884.1
SIO_010081: GALNTL6
subclass of: SO_0000673
so part of: GALNTL6
location: join(5514467..5514516,5802903..5803011,5836116..5836254,5857536..5857702,6176748..6176933,6180737..6180920,6237283..6237400,6262087..6262194,6274586..6274807,6293595..6293711,6301651..6301800,6317530..6317994)
location: region:5514467-6317994:1
so has part: feature:5514467-5514516:1:exon
so has part: feature:5802903-5803011:1:exon
so has part: feature:5836116-5836254:1:exon
so has part: feature:5857536-5857702:1:exon
so has part: feature:6176748-6176933:1:exon
so has part: feature:6180737-6180920:1:exon
so has part: feature:6237283-6237400:1:exon
so has part: feature:6262087-6262194:1:exon
so has part: feature:6274586-6274807:1:exon
so has part: feature:6293595-6293711:1:exon
so has part: feature:6301651-6301800:1:exon
so has part: feature:6317530-6317994:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5514467-5514516:1:exon

position:5514516:1
position: 5514516
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:5802903-5803011:1:exon

position:5802903:1
position: 5802903
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5803011:1
position: 5803011
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:5836116-5836254:1:exon

position:5836116:1
position: 5836116
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5836254:1
position: 5836254
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:5857536-5857702:1:exon

position:5857536:1
position: 5857536
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5857702:1
position: 5857702
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:6176748-6176933:1:exon

position:6176748:1
position: 6176748
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6176933:1
position: 6176933
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:6180737-6180920:1:exon

position:6180737:1
position: 6180737
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6180920:1
position: 6180920
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:6237283-6237400:1:exon

position:6237283:1
position: 6237283
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6237400:1
position: 6237400
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:6262087-6262194:1:exon

position:6262087:1
position: 6262087
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6262194:1
position: 6262194
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:6274586-6274807:1:exon

position:6274586:1
position: 6274586
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6274807:1
position: 6274807
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:6293595-6293711:1:exon

position:6293595:1
position: 6293595
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6293711:1
position: 6293711
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:6301651-6301800:1:exon

position:6301651:1
position: 6301651
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6301800:1
position: 6301800
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:6317530-6317994:1:exon

position:6317530:1
position: 6317530
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

GALNTL6
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 419612
gene: GALNTL6
product: polypeptide N-acetylgalactosaminyltransferase like 6, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 12 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_032470880.1
SIO_010081: GALNTL6
subclass of: SO_0000673
so part of: GALNTL6
location: join(5515686..5516388,5802903..5803011,5836116..5836254,5857536..5857702,6176748..6176933,6180737..6180920,6237283..6237400,6262087..6262194,6274586..6274807,6293595..6293711,6301651..6301800,6317530..6317994)
location: region:5515686-6317994:1
so has part: feature:5515686-5516388:1:exon
so has part: feature:5802903-5803011:1:exon
so has part: feature:5836116-5836254:1:exon
so has part: feature:5857536-5857702:1:exon
so has part: feature:6176748-6176933:1:exon
so has part: feature:6180737-6180920:1:exon
so has part: feature:6237283-6237400:1:exon
so has part: feature:6262087-6262194:1:exon
so has part: feature:6274586-6274807:1:exon
so has part: feature:6293595-6293711:1:exon
so has part: feature:6301651-6301800:1:exon
so has part: feature:6317530-6317994:1:exon

position:5515686:1
position: 5515686
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5515686-5516388:1:exon

position:5516388:1
position: 5516388
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:5802903-5803011:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5836116-5836254:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5857536-5857702:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6176748-6176933:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:6180737-6180920:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:6237283-6237400:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:6262087-6262194:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:6274586-6274807:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:6293595-6293711:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:6301651-6301800:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:6317530-6317994:1:exon

GALNTL6
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 419612
gene: GALNTL6
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: polypeptide N-acetylgalactosaminyltransferase-like 6 isoform X1
translation: MRLFCRCPSPSESCRLVLSTQQKFLASPQFLVLRRGEERTLALNSRRGQGTTSCNFPSLLPFAMKRKQKRFLQMTLLFMVALIFLPNVGLWSLYKEKHLVKSAEPGEQQTFPLGLGDGQFYAWTDGLRRKDWHDYESIQREAMRSGKGEHGKPYPLTEEDHDDSAYRENGFNIFVSNNIALERSLPDIRHANCKHKMYLERLPNTSIIIPFHNEGWTSLLRTIHSIINRTPESLVAEVILVDDFSDREHLKDKLEEYMARFSKVRIVRTKKREGLIRTRLLGASLARGEVLTFLDSHCEVNVNWLPPLLNQIALNHKTIVCPMIDVIDHNHFGYEAQAGDAMRGAFDWEMYYKRIPIPPELQREDPSDPFESPVMAGGLFAVDRKWFWELGGYDPGLEIWGGEQYEISFKVWMCGGEMFDVPCSRVGHIYRKYVPYKVPSGTSLARNLKRVAETWMDEFAEFVYQRRPEYRHLSTGDLSAQKELRRQLQCKDFKWFMAAVAWDVPKYYPPVEPPPAAWGELRNVAANLCVDSKHGATGTELRLDVCVKDGSERTWSHEQLFTFGWREDIRPGEPLHTRKFCFDAISHSSAVTLYDCHGMKGNQLWGHRKDRTLFHPVSNSCMDCNPAEKKIFMARCDPLSETQQWIFEHINMTVLEKFNYRASS
SIO_010081: GALNTL6
subclass of: SO_0000673
so part of: GALNTL6
location: join(5516062..5516388,5802903..5803011,5836116..5836254,5857536..5857702,6176748..6176933,6180737..6180920,6237283..6237400,6262087..6262194,6274586..6274807,6293595..6293711,6301651..6301800,6317530..6317697)
location: region:5516062-6317697:1
so has part: feature:5516062-5516388:1:exon
so has part: feature:5802903-5803011:1:exon
so has part: feature:5836116-5836254:1:exon
so has part: feature:5857536-5857702:1:exon
so has part: feature:6176748-6176933:1:exon
so has part: feature:6180737-6180920:1:exon
so has part: feature:6237283-6237400:1:exon
so has part: feature:6262087-6262194:1:exon
so has part: feature:6274586-6274807:1:exon
so has part: feature:6293595-6293711:1:exon
so has part: feature:6301651-6301800:1:exon
so has part: feature:6317530-6317697:1:exon

XP_032326771.1
type: Protein
SIO_000068: ncbiprotein

position:5516062:1
position: 5516062
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6317697:1
position: 6317697
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5516062-5516388:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5802903-5803011:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5836116-5836254:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5857536-5857702:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6176748-6176933:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:6180737-6180920:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:6237283-6237400:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:6262087-6262194:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:6274586-6274807:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:6293595-6293711:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:6301651-6301800:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:6317530-6317697:1:exon

LOC116660756
type: Gene
subclass of: SO_0000704
RO_0002162: 419612
gene: LOC116660756
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 5573317..5593720
location: region:5573317-5593720:1
so has part: feature:5573317-5593720:1:exon
subclass of: SO_0000011

116660756
type: Gene
SIO_000068: ncbigene

position:5573317:1
position: 5573317
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5593720:1
position: 5593720
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5573317-5593720:1:exon

LOC116660756
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 419612
nc RNA class: lncRNA
gene: LOC116660756
product: uncharacterized LOC116660756
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XR_004316369.1
SIO_010081: LOC116660756
subclass of: SO_0000673
so part of: LOC116660756
location: join(5573317..5573326,5575147..5575156,5592754..5593720)
location: region:5573317-5593720:1
so has part: feature:5573317-5573326:1:exon
so has part: feature:5575147-5575156:1:exon
so has part: feature:5592754-5593720:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5573317-5573326:1:exon

position:5573326:1
position: 5573326
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:5575147-5575156:1:exon

position:5575147:1
position: 5575147
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5575156:1
position: 5575156
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:5592754-5593720:1:exon

position:5592754:1
position: 5592754
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

GALNTL6
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 419612
gene: GALNTL6
product: polypeptide N-acetylgalactosaminyltransferase like 6, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_032470881.1
SIO_010081: GALNTL6
subclass of: SO_0000673
so part of: GALNTL6
location: join(5652097..5652235,5802903..5803011,5836116..5836254,5857536..5857702,6176748..6176933,6180737..6180920,6237283..6237400,6262087..6262194,6274586..6274807,6293595..6293711,6301651..6301800,6317530..6317994)
location: region:5652097-6317994:1
so has part: feature:5652097-5652235:1:exon
so has part: feature:5802903-5803011:1:exon
so has part: feature:5836116-5836254:1:exon
so has part: feature:5857536-5857702:1:exon
so has part: feature:6176748-6176933:1:exon
so has part: feature:6180737-6180920:1:exon
so has part: feature:6237283-6237400:1:exon
so has part: feature:6262087-6262194:1:exon
so has part: feature:6274586-6274807:1:exon
so has part: feature:6293595-6293711:1:exon
so has part: feature:6301651-6301800:1:exon
so has part: feature:6317530-6317994:1:exon

position:5652097:1
position: 5652097
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5652097-5652235:1:exon

position:5652235:1
position: 5652235
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:5802903-5803011:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5836116-5836254:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5857536-5857702:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6176748-6176933:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:6180737-6180920:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:6237283-6237400:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:6262087-6262194:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:6274586-6274807:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:6293595-6293711:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:6301651-6301800:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:6317530-6317994:1:exon

LOC116660761
type: Gene
subclass of: SO_0000704
RO_0002162: 419612
gene: LOC116660761
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 5762065..5781731
location: region:5762065-5781731:1
so has part: feature:5762065-5781731:1:exon
subclass of: SO_0000011

116660761
type: Gene
SIO_000068: ncbigene

position:5762065:1
position: 5762065
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5781731:1
position: 5781731
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5762065-5781731:1:exon

LOC116660761
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 419612
nc RNA class: lncRNA
gene: LOC116660761
product: uncharacterized LOC116660761
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XR_004316374.1
SIO_010081: LOC116660761
subclass of: SO_0000673
so part of: LOC116660761
location: join(5762065..5762076,5763037..5763043,5781603..5781731)
location: region:5762065-5781731:1
so has part: feature:5762065-5762076:1:exon
so has part: feature:5763037-5763043:1:exon
so has part: feature:5781603-5781731:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5762065-5762076:1:exon

position:5762076:1
position: 5762076
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:5763037-5763043:1:exon

position:5763037:1
position: 5763037
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5763043:1
position: 5763043
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:5781603-5781731:1:exon

position:5781603:1
position: 5781603
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

GALNTL6
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 419612
gene: GALNTL6
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: polypeptide N-acetylgalactosaminyltransferase-like 6 isoform X2
translation: MRSGKGEHGKPYPLTEEDHDDSAYRENGFNIFVSNNIALERSLPDIRHANCKHKMYLERLPNTSIIIPFHNEGWTSLLRTIHSIINRTPESLVAEVILVDDFSDREHLKDKLEEYMARFSKVRIVRTKKREGLIRTRLLGASLARGEVLTFLDSHCEVNVNWLPPLLNQIALNHKTIVCPMIDVIDHNHFGYEAQAGDAMRGAFDWEMYYKRIPIPPELQREDPSDPFESPVMAGGLFAVDRKWFWELGGYDPGLEIWGGEQYEISFKVWMCGGEMFDVPCSRVGHIYRKYVPYKVPSGTSLARNLKRVAETWMDEFAEFVYQRRPEYRHLSTGDLSAQKELRRQLQCKDFKWFMAAVAWDVPKYYPPVEPPPAAWGELRNVAANLCVDSKHGATGTELRLDVCVKDGSERTWSHEQLFTFGWREDIRPGEPLHTRKFCFDAISHSSAVTLYDCHGMKGNQLWGHRKDRTLFHPVSNSCMDCNPAEKKIFMARCDPLSETQQWIFEHINMTVLEKFNYRASS
SIO_010081: GALNTL6
subclass of: SO_0000673
so part of: GALNTL6
location: join(5803002..5803011,5836116..5836254,5857536..5857702,6176748..6176933,6180737..6180920,6237283..6237400,6262087..6262194,6274586..6274807,6293595..6293711,6301651..6301800,6317530..6317697)
location: region:5803002-6317697:1
so has part: feature:5803002-5803011:1:exon
so has part: feature:5836116-5836254:1:exon
so has part: feature:5857536-5857702:1:exon
so has part: feature:6176748-6176933:1:exon
so has part: feature:6180737-6180920:1:exon
so has part: feature:6237283-6237400:1:exon
so has part: feature:6262087-6262194:1:exon
so has part: feature:6274586-6274807:1:exon
so has part: feature:6293595-6293711:1:exon
so has part: feature:6301651-6301800:1:exon
so has part: feature:6317530-6317697:1:exon

XP_032326772.1
type: Protein
SIO_000068: ncbiprotein

position:5803002:1
position: 5803002
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5803002-5803011:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5836116-5836254:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5857536-5857702:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6176748-6176933:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6180737-6180920:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:6237283-6237400:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:6262087-6262194:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:6274586-6274807:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:6293595-6293711:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:6301651-6301800:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:6317530-6317697:1:exon

GALNTL6
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 419612
gene: GALNTL6
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: polypeptide N-acetylgalactosaminyltransferase-like 6 isoform X2
translation: MRSGKGEHGKPYPLTEEDHDDSAYRENGFNIFVSNNIALERSLPDIRHANCKHKMYLERLPNTSIIIPFHNEGWTSLLRTIHSIINRTPESLVAEVILVDDFSDREHLKDKLEEYMARFSKVRIVRTKKREGLIRTRLLGASLARGEVLTFLDSHCEVNVNWLPPLLNQIALNHKTIVCPMIDVIDHNHFGYEAQAGDAMRGAFDWEMYYKRIPIPPELQREDPSDPFESPVMAGGLFAVDRKWFWELGGYDPGLEIWGGEQYEISFKVWMCGGEMFDVPCSRVGHIYRKYVPYKVPSGTSLARNLKRVAETWMDEFAEFVYQRRPEYRHLSTGDLSAQKELRRQLQCKDFKWFMAAVAWDVPKYYPPVEPPPAAWGELRNVAANLCVDSKHGATGTELRLDVCVKDGSERTWSHEQLFTFGWREDIRPGEPLHTRKFCFDAISHSSAVTLYDCHGMKGNQLWGHRKDRTLFHPVSNSCMDCNPAEKKIFMARCDPLSETQQWIFEHINMTVLEKFNYRASS
SIO_010081: GALNTL6
subclass of: SO_0000673
so part of: GALNTL6
location: join(5803002..5803011,5836116..5836254,5857536..5857702,6176748..6176933,6180737..6180920,6237283..6237400,6262087..6262194,6274586..6274807,6293595..6293711,6301651..6301800,6317530..6317697)
location: region:5803002-6317697:1
so has part: feature:5803002-5803011:1:exon
so has part: feature:5836116-5836254:1:exon
so has part: feature:5857536-5857702:1:exon
so has part: feature:6176748-6176933:1:exon
so has part: feature:6180737-6180920:1:exon
so has part: feature:6237283-6237400:1:exon
so has part: feature:6262087-6262194:1:exon
so has part: feature:6274586-6274807:1:exon
so has part: feature:6293595-6293711:1:exon
so has part: feature:6301651-6301800:1:exon
so has part: feature:6317530-6317697:1:exon

XP_032326775.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:5803002-5803011:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5836116-5836254:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5857536-5857702:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6176748-6176933:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6180737-6180920:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:6237283-6237400:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:6262087-6262194:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:6274586-6274807:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:6293595-6293711:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:6301651-6301800:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:6317530-6317697:1:exon

GALNTL6
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 419612
gene: GALNTL6
product: polypeptide N-acetylgalactosaminyltransferase like 6, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_032470883.1
SIO_010081: GALNTL6
subclass of: SO_0000673
so part of: GALNTL6
location: join(5836189..5836254,5854564..5854622,5857536..5857702,6176748..6176933,6180737..6180920,6237283..6237400,6262087..6262194,6274586..6274807,6293595..6293711,6301651..6301800,6317530..6317994)
location: region:5836189-6317994:1
so has part: feature:5836189-5836254:1:exon
so has part: feature:5854564-5854622:1:exon
so has part: feature:5857536-5857702:1:exon
so has part: feature:6176748-6176933:1:exon
so has part: feature:6180737-6180920:1:exon
so has part: feature:6237283-6237400:1:exon
so has part: feature:6262087-6262194:1:exon
so has part: feature:6274586-6274807:1:exon
so has part: feature:6293595-6293711:1:exon
so has part: feature:6301651-6301800:1:exon
so has part: feature:6317530-6317994:1:exon

position:5836189:1
position: 5836189
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5836189-5836254:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5854564-5854622:1:exon

position:5854564:1
position: 5854564
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5854622:1
position: 5854622
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:5857536-5857702:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6176748-6176933:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6180737-6180920:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:6237283-6237400:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:6262087-6262194:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:6274586-6274807:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:6293595-6293711:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:6301651-6301800:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:6317530-6317994:1:exon

GALNTL6
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 419612
gene: GALNTL6
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: polypeptide N-acetylgalactosaminyltransferase-like 6 isoform X3
translation: MYLERLPNTSIIIPFHNEGWTSLLRTIHSIINRTPESLVAEVILVDDFSDREHLKDKLEEYMARFSKVRIVRTKKREGLIRTRLLGASLARGEVLTFLDSHCEVNVNWLPPLLNQIALNHKTIVCPMIDVIDHNHFGYEAQAGDAMRGAFDWEMYYKRIPIPPELQREDPSDPFESPVMAGGLFAVDRKWFWELGGYDPGLEIWGGEQYEISFKVWMCGGEMFDVPCSRVGHIYRKYVPYKVPSGTSLARNLKRVAETWMDEFAEFVYQRRPEYRHLSTGDLSAQKELRRQLQCKDFKWFMAAVAWDVPKYYPPVEPPPAAWGELRNVAANLCVDSKHGATGTELRLDVCVKDGSERTWSHEQLFTFGWREDIRPGEPLHTRKFCFDAISHSSAVTLYDCHGMKGNQLWGHRKDRTLFHPVSNSCMDCNPAEKKIFMARCDPLSETQQWIFEHINMTVLEKFNYRASS
SIO_010081: GALNTL6
subclass of: SO_0000673
so part of: GALNTL6
location: join(5857549..5857702,6176748..6176933,6180737..6180920,6237283..6237400,6262087..6262194,6274586..6274807,6293595..6293711,6301651..6301800,6317530..6317697)
location: region:5857549-6317697:1
so has part: feature:5857549-5857702:1:exon
so has part: feature:6176748-6176933:1:exon
so has part: feature:6180737-6180920:1:exon
so has part: feature:6237283-6237400:1:exon
so has part: feature:6262087-6262194:1:exon
so has part: feature:6274586-6274807:1:exon
so has part: feature:6293595-6293711:1:exon
so has part: feature:6301651-6301800:1:exon
so has part: feature:6317530-6317697:1:exon

XP_032326774.1
type: Protein
SIO_000068: ncbiprotein

position:5857549:1
position: 5857549
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5857549-5857702:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6176748-6176933:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6180737-6180920:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6237283-6237400:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6262087-6262194:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:6274586-6274807:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:6293595-6293711:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:6301651-6301800:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:6317530-6317697:1:exon

LOC116660755
type: Gene
subclass of: SO_0000704
RO_0002162: 419612
gene: LOC116660755
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 5869707..5872390
location: region:5869707-5872390:1
so has part: feature:5869707-5872390:1:exon
subclass of: SO_0000011

116660755
type: Gene
SIO_000068: ncbigene

position:5869707:1
position: 5869707
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5872390:1
position: 5872390
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5869707-5872390:1:exon

LOC116660755
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 419612
nc RNA class: lncRNA
gene: LOC116660755
product: uncharacterized LOC116660755
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XR_004316368.1
SIO_010081: LOC116660755
subclass of: SO_0000673
so part of: LOC116660755
location: join(5869707..5870134,5871317..5871468,5871670..5872390)
location: region:5869707-5872390:1
so has part: feature:5869707-5870134:1:exon
so has part: feature:5871317-5871468:1:exon
so has part: feature:5871670-5872390:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5869707-5870134:1:exon

position:5870134:1
position: 5870134
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:5871317-5871468:1:exon

position:5871317:1
position: 5871317
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5871468:1
position: 5871468
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:5871670-5872390:1:exon

position:5871670:1
position: 5871670
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC116660759
type: Gene
subclass of: SO_0000704
RO_0002162: 419612
gene: LOC116660759
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(6032617..6049795)
location: region:6032617-6049795:-1
so has part: feature:6032617-6049795:-1:exon
subclass of: SO_0000011

116660759
type: Gene
SIO_000068: ncbigene

position:6032617:-1
position: 6032617
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6049795:-1
position: 6049795
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6032617-6049795:-1:exon

LOC116660759
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 419612
nc RNA class: lncRNA
gene: LOC116660759
product: uncharacterized LOC116660759
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XR_004316372.1
SIO_010081: LOC116660759
subclass of: SO_0000673
so part of: LOC116660759
location: complement(join(6032617..6032627,6039983..6039994,6048909..6049795))
location: region:6032617-6049795:-1
so has part: feature:6048909-6049795:-1:exon
so has part: feature:6039983-6039994:-1:exon
so has part: feature:6032617-6032627:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6048909-6049795:-1:exon

position:6048909:-1
position: 6048909
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:6039983-6039994:-1:exon

position:6039983:-1
position: 6039983
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6039994:-1
position: 6039994
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:6032617-6032627:-1:exon

position:6032627:-1
position: 6032627
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC116660760
type: Gene
subclass of: SO_0000704
RO_0002162: 419612
gene: LOC116660760
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 6108330..6123115
location: region:6108330-6123115:1
so has part: feature:6108330-6123115:1:exon
subclass of: SO_0000011

116660760
type: Gene
SIO_000068: ncbigene

position:6108330:1
position: 6108330
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6123115:1
position: 6123115
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6108330-6123115:1:exon

LOC116660760
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 419612
nc RNA class: lncRNA
gene: LOC116660760
product: uncharacterized LOC116660760
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XR_004316373.1
SIO_010081: LOC116660760
subclass of: SO_0000673
so part of: LOC116660760
location: join(6108330..6108339,6116189..6116190,6122722..6123115)
location: region:6108330-6123115:1
so has part: feature:6108330-6108339:1:exon
so has part: feature:6116189-6116190:1:exon
so has part: feature:6122722-6123115:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6108330-6108339:1:exon

position:6108339:1
position: 6108339
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:6116189-6116190:1:exon

position:6116189:1
position: 6116189
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6116190:1
position: 6116190
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:6122722-6123115:1:exon

position:6122722:1
position: 6122722
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC116660757
type: Gene
subclass of: SO_0000704
RO_0002162: 419612
gene: LOC116660757
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(6242972..6267743)
location: region:6242972-6267743:-1
so has part: feature:6242972-6267743:-1:exon
subclass of: SO_0000011

116660757
type: Gene
SIO_000068: ncbigene

position:6242972:-1
position: 6242972
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6267743:-1
position: 6267743
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6242972-6267743:-1:exon

LOC116660757
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 419612
nc RNA class: lncRNA
gene: LOC116660757
product: uncharacterized LOC116660757
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XR_004316370.1
SIO_010081: LOC116660757
subclass of: SO_0000673
so part of: LOC116660757
location: complement(join(6242972..6242982,6258718..6258723,6267580..6267743))
location: region:6242972-6267743:-1
so has part: feature:6267580-6267743:-1:exon
so has part: feature:6258718-6258723:-1:exon
so has part: feature:6242972-6242982:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6267580-6267743:-1:exon

position:6267580:-1
position: 6267580
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:6258718-6258723:-1:exon

position:6258718:-1
position: 6258718
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6258723:-1
position: 6258723
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:6242972-6242982:-1:exon

position:6242982:-1
position: 6242982
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC116660758
type: Gene
subclass of: SO_0000704
RO_0002162: 419612
gene: LOC116660758
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(6361782..6396365)
location: region:6361782-6396365:-1
so has part: feature:6361782-6396365:-1:exon
subclass of: SO_0000011

116660758
type: Gene
SIO_000068: ncbigene

position:6361782:-1
position: 6361782
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6396365:-1
position: 6396365
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6361782-6396365:-1:exon

LOC116660758
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 419612
nc RNA class: lncRNA
gene: LOC116660758
product: uncharacterized LOC116660758
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XR_004316371.1
SIO_010081: LOC116660758
subclass of: SO_0000673
so part of: LOC116660758
location: complement(join(6361782..6362332,6362441..6362635,6395868..6396365))
location: region:6361782-6396365:-1
so has part: feature:6395868-6396365:-1:exon
so has part: feature:6362441-6362635:-1:exon
so has part: feature:6361782-6362332:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6395868-6396365:-1:exon

position:6395868:-1
position: 6395868
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:6362441-6362635:-1:exon

position:6362441:-1
position: 6362441
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6362635:-1
position: 6362635
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:6361782-6362332:-1:exon

position:6362332:-1
position: 6362332
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

GALNT7
type: Gene
subclass of: SO_0000704
RO_0002162: 419612
gene: GALNT7
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 6394982..6489595
location: region:6394982-6489595:1
so has part: feature:6394982-6489595:1:exon
subclass of: SO_0000010

102508429
type: Gene
SIO_000068: ncbigene

position:6394982:1
position: 6394982
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6489595:1
position: 6489595
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6394982-6489595:1:exon

GALNT7
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 419612
gene: GALNT7
product: polypeptide N-acetylgalactosaminyltransferase 7, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 34 samples with support for all annotated introns
transcript id: XM_032470885.1
SIO_010081: GALNT7
subclass of: SO_0000673
so part of: GALNT7
location: join(6394982..6395198,6442697..6443160,6466990..6467156,6470959..6471089,6471347..6471426,6473299..6473481,6476634..6476751,6478148..6478270,6481076..6481294,6483233..6483331,6484044..6484172,6487136..6489595)
location: region:6394982-6489595:1
so has part: feature:6394982-6395198:1:exon
so has part: feature:6442697-6443160:1:exon
so has part: feature:6466990-6467156:1:exon
so has part: feature:6470959-6471089:1:exon
so has part: feature:6471347-6471426:1:exon
so has part: feature:6473299-6473481:1:exon
so has part: feature:6476634-6476751:1:exon
so has part: feature:6478148-6478270:1:exon
so has part: feature:6481076-6481294:1:exon
so has part: feature:6483233-6483331:1:exon
so has part: feature:6484044-6484172:1:exon
so has part: feature:6487136-6489595:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6394982-6395198:1:exon

position:6395198:1
position: 6395198
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:6442697-6443160:1:exon

position:6442697:1
position: 6442697
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6443160:1
position: 6443160
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:6466990-6467156:1:exon

position:6466990:1
position: 6466990
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6467156:1
position: 6467156
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:6470959-6471089:1:exon

position:6470959:1
position: 6470959
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6471089:1
position: 6471089
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:6471347-6471426:1:exon

position:6471347:1
position: 6471347
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6471426:1
position: 6471426
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:6473299-6473481:1:exon

position:6473299:1
position: 6473299
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6473481:1
position: 6473481
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:6476634-6476751:1:exon

position:6476634:1
position: 6476634
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6476751:1
position: 6476751
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:6478148-6478270:1:exon

position:6478148:1
position: 6478148
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6478270:1
position: 6478270
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:6481076-6481294:1:exon

position:6481076:1
position: 6481076
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6481294:1
position: 6481294
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:6483233-6483331:1:exon

position:6483233:1
position: 6483233
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6483331:1
position: 6483331
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:6484044-6484172:1:exon

position:6484044:1
position: 6484044
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6484172:1
position: 6484172
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:6487136-6489595:1:exon

position:6487136:1
position: 6487136
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

GALNT7
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 419612
gene: GALNT7
product: polypeptide N-acetylgalactosaminyltransferase 7, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 27 samples with support for all annotated introns
transcript id: XM_032470886.1
SIO_010081: GALNT7
subclass of: SO_0000673
so part of: GALNT7
location: join(6394982..6395198,6442697..6443160,6466990..6467156,6470959..6471089,6471347..6471426,6473629..6473811,6476634..6476751,6478148..6478270,6481076..6481294,6483233..6483331,6484044..6484172,6487136..6489595)
location: region:6394982-6489595:1
so has part: feature:6394982-6395198:1:exon
so has part: feature:6442697-6443160:1:exon
so has part: feature:6466990-6467156:1:exon
so has part: feature:6470959-6471089:1:exon
so has part: feature:6471347-6471426:1:exon
so has part: feature:6473629-6473811:1:exon
so has part: feature:6476634-6476751:1:exon
so has part: feature:6478148-6478270:1:exon
so has part: feature:6481076-6481294:1:exon
so has part: feature:6483233-6483331:1:exon
so has part: feature:6484044-6484172:1:exon
so has part: feature:6487136-6489595:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6394982-6395198:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6442697-6443160:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6466990-6467156:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6470959-6471089:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6471347-6471426:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:6473629-6473811:1:exon

position:6473629:1
position: 6473629
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6473811:1
position: 6473811
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:6476634-6476751:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:6478148-6478270:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:6481076-6481294:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:6483233-6483331:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:6484044-6484172:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:6487136-6489595:1:exon

GALNT7
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 419612
gene: GALNT7
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: N-acetylgalactosaminyltransferase 7 isoform X1
translation: MRLKIGLLLRSLLVVGSFLGLVVLWSSLSPRPDEPSPLSRMREDRAVNNPLPDRGGNGLALGEDRFKPVVPWPHVEGVEVDLESIRRKNKAGPEQERRAGGGDNQRDVMQRQYLTFKPQTLTYRDPVLRPGVLGNFEPKEPEPHGVVGGPGEKAQPLVLGPEFKHAVQASIKEFGFNMVASDMISLDRSVNDLRQEECKYWHYDENLLTASVVIVFHNEGWSTLMRTVHSVIKRTPRKYLAEIVLIDDFSNKEHLKGKLDEYIKLWNGLVKVFRNERREGLIQARSIGAQKAKLGQVLIYLDAHCEVAANWYAPLVAPISKDRTTCTVPLIDYIDGNDYSIEPQQGGDEDGFARGAWDWSLLWKRIPLSHKEKAKRKHKTEPYRSPAMAGGLFAIERDFFFELGLYDPGLQIWGGENFEISYKIWQCGGKLLFVPCSRVGHIYRLEGWQGNPPPIYVGSSPTLKNYVRVVEVWWDEYKDYFYASRPESKALAYGDISELKKFREDHNCKSFKWFMEEIAYDVTSHYPLPPRNVEWGEIRGFETAYCIDSMGRTNGGLVELGPCHRMGGNQLFRINEANQLMQYDQCLTKGPDGSKIMITHCNLNEFKEWQYFKNLHRLTHVPSGMCLDRSEILHQVFISNCDSSKTTQKWEINNIHSV
SIO_010081: GALNT7
subclass of: SO_0000673
so part of: GALNT7
location: join(6395073..6395198,6442697..6443160,6466990..6467156,6470959..6471089,6471347..6471426,6473299..6473481,6476634..6476751,6478148..6478270,6481076..6481294,6483233..6483331,6484044..6484172,6487136..6487273)
location: region:6395073-6487273:1
so has part: feature:6395073-6395198:1:exon
so has part: feature:6442697-6443160:1:exon
so has part: feature:6466990-6467156:1:exon
so has part: feature:6470959-6471089:1:exon
so has part: feature:6471347-6471426:1:exon
so has part: feature:6473299-6473481:1:exon
so has part: feature:6476634-6476751:1:exon
so has part: feature:6478148-6478270:1:exon
so has part: feature:6481076-6481294:1:exon
so has part: feature:6483233-6483331:1:exon
so has part: feature:6484044-6484172:1:exon
so has part: feature:6487136-6487273:1:exon

XP_032326776.1
type: Protein
SIO_000068: ncbiprotein

position:6395073:1
position: 6395073
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6487273:1
position: 6487273
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6395073-6395198:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6442697-6443160:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6466990-6467156:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6470959-6471089:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6471347-6471426:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:6473299-6473481:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:6476634-6476751:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:6478148-6478270:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:6481076-6481294:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:6483233-6483331:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:6484044-6484172:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:6487136-6487273:1:exon

GALNT7
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 419612
gene: GALNT7
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: N-acetylgalactosaminyltransferase 7 isoform X2
translation: MRLKIGLLLRSLLVVGSFLGLVVLWSSLSPRPDEPSPLSRMREDRAVNNPLPDRGGNGLALGEDRFKPVVPWPHVEGVEVDLESIRRKNKAGPEQERRAGGGDNQRDVMQRQYLTFKPQTLTYRDPVLRPGVLGNFEPKEPEPHGVVGGPGEKAQPLVLGPEFKHAVQASIKEFGFNMVASDMISLDRSVNDLRQEECKYWHYDENLLTASVVIVFHNEGWSTLMRTVHSVIKRTPRKYLAEIVLIDDFSNKEHLKGKLDEYIKLWNGLVKVFRNERREGLIQARSIGAQKAKLGQVLIYLDAHCEVAANWYAPLVAPISKDRTICTVPIIDVINGNTYEIVPQGGGDEDGYARGVWDWSMLWKRVPLTPREKRMRKTKTEPYRSPAMAGGLFAIERDFFFELGLYDPGLQIWGGENFEISYKIWQCGGKLLFVPCSRVGHIYRLEGWQGNPPPIYVGSSPTLKNYVRVVEVWWDEYKDYFYASRPESKALAYGDISELKKFREDHNCKSFKWFMEEIAYDVTSHYPLPPRNVEWGEIRGFETAYCIDSMGRTNGGLVELGPCHRMGGNQLFRINEANQLMQYDQCLTKGPDGSKIMITHCNLNEFKEWQYFKNLHRLTHVPSGMCLDRSEILHQVFISNCDSSKTTQKWEINNIHSV
SIO_010081: GALNT7
subclass of: SO_0000673
so part of: GALNT7
location: join(6395073..6395198,6442697..6443160,6466990..6467156,6470959..6471089,6471347..6471426,6473629..6473811,6476634..6476751,6478148..6478270,6481076..6481294,6483233..6483331,6484044..6484172,6487136..6487273)
location: region:6395073-6487273:1
so has part: feature:6395073-6395198:1:exon
so has part: feature:6442697-6443160:1:exon
so has part: feature:6466990-6467156:1:exon
so has part: feature:6470959-6471089:1:exon
so has part: feature:6471347-6471426:1:exon
so has part: feature:6473629-6473811:1:exon
so has part: feature:6476634-6476751:1:exon
so has part: feature:6478148-6478270:1:exon
so has part: feature:6481076-6481294:1:exon
so has part: feature:6483233-6483331:1:exon
so has part: feature:6484044-6484172:1:exon
so has part: feature:6487136-6487273:1:exon

XP_032326777.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:6395073-6395198:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6442697-6443160:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6466990-6467156:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6470959-6471089:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6471347-6471426:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:6473629-6473811:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:6476634-6476751:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:6478148-6478270:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:6481076-6481294:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:6483233-6483331:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:6484044-6484172:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:6487136-6487273:1:exon

LOC116660754
type: Gene
subclass of: SO_0000704
RO_0002162: 419612
gene: LOC116660754
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(6451958..6466963)
location: region:6451958-6466963:-1
so has part: feature:6451958-6466963:-1:exon
subclass of: SO_0000011

116660754
type: Gene
SIO_000068: ncbigene

position:6451958:-1
position: 6451958
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6466963:-1
position: 6466963
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6451958-6466963:-1:exon

LOC116660754
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 419612
nc RNA class: lncRNA
gene: LOC116660754
product: uncharacterized LOC116660754, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XR_004316366.1
SIO_010081: LOC116660754
subclass of: SO_0000673
so part of: LOC116660754
location: complement(join(6451958..6457357,6458101..6458475,6460414..6460478,6460976..6462344,6466742..6466845))
location: region:6451958-6466845:-1
so has part: feature:6466742-6466845:-1:exon
so has part: feature:6460976-6462344:-1:exon
so has part: feature:6460414-6460478:-1:exon
so has part: feature:6458101-6458475:-1:exon
so has part: feature:6451958-6457357:-1:exon

position:6466845:-1
position: 6466845
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6466742-6466845:-1:exon

position:6466742:-1
position: 6466742
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:6460976-6462344:-1:exon

position:6460976:-1
position: 6460976
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6462344:-1
position: 6462344
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:6460414-6460478:-1:exon

position:6460414:-1
position: 6460414
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6460478:-1
position: 6460478
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:6458101-6458475:-1:exon

position:6458101:-1
position: 6458101
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6458475:-1
position: 6458475
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:6451958-6457357:-1:exon

position:6457357:-1
position: 6457357
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC116660754
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 419612
nc RNA class: lncRNA
gene: LOC116660754
product: uncharacterized LOC116660754, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XR_004316365.1
SIO_010081: LOC116660754
subclass of: SO_0000673
so part of: LOC116660754
location: complement(join(6451958..6457357,6458101..6458475,6459966..6460030,6460384..6460478,6460976..6462344,6466742..6466845))
location: region:6451958-6466845:-1
so has part: feature:6466742-6466845:-1:exon
so has part: feature:6460976-6462344:-1:exon
so has part: feature:6460384-6460478:-1:exon
so has part: feature:6459966-6460030:-1:exon
so has part: feature:6458101-6458475:-1:exon
so has part: feature:6451958-6457357:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6466742-6466845:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6460976-6462344:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6460384-6460478:-1:exon

position:6460384:-1
position: 6460384
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:6459966-6460030:-1:exon

position:6459966:-1
position: 6459966
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6460030:-1
position: 6460030
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:6458101-6458475:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:6451958-6457357:-1:exon

LOC116660754
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 419612
nc RNA class: lncRNA
gene: LOC116660754
product: uncharacterized LOC116660754, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XR_004316367.1
SIO_010081: LOC116660754
subclass of: SO_0000673
so part of: LOC116660754
location: complement(join(6454404..6457357,6458101..6458475,6459966..6460030,6460384..6460478,6460976..6462344,6466880..6466963))
location: region:6454404-6466963:-1
so has part: feature:6466880-6466963:-1:exon
so has part: feature:6460976-6462344:-1:exon
so has part: feature:6460384-6460478:-1:exon
so has part: feature:6459966-6460030:-1:exon
so has part: feature:6458101-6458475:-1:exon
so has part: feature:6454404-6457357:-1:exon

position:6454404:-1
position: 6454404
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6466880-6466963:-1:exon

position:6466880:-1
position: 6466880
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:6460976-6462344:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6460384-6460478:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6459966-6460030:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6458101-6458475:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:6454404-6457357:-1:exon

HMGB2
type: Gene
subclass of: SO_0000704
RO_0002162: 419612
gene: HMGB2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(6496378..6498866)
location: region:6496378-6498866:-1
so has part: feature:6496378-6498866:-1:exon
subclass of: SO_0000010

102507944
type: Gene
SIO_000068: ncbigene

position:6496378:-1
position: 6496378
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6498866:-1
position: 6498866
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6496378-6498866:-1:exon

HMGB2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 419612
gene: HMGB2
product: high mobility group box 2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 31 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 48 samples with support for all annotated introns
transcript id: XM_032470859.1
SIO_010081: HMGB2
subclass of: SO_0000673
so part of: HMGB2
location: complement(join(6496378..6496927,6497515..6497689,6497772..6497917,6498135..6498344,6498714..6498866))
location: region:6496378-6498866:-1
so has part: feature:6498714-6498866:-1:exon
so has part: feature:6498135-6498344:-1:exon
so has part: feature:6497772-6497917:-1:exon
so has part: feature:6497515-6497689:-1:exon
so has part: feature:6496378-6496927:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6498714-6498866:-1:exon

position:6498714:-1
position: 6498714
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:6498135-6498344:-1:exon

position:6498135:-1
position: 6498135
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6498344:-1
position: 6498344
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:6497772-6497917:-1:exon

position:6497772:-1
position: 6497772
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6497917:-1
position: 6497917
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:6497515-6497689:-1:exon

position:6497515:-1
position: 6497515
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6497689:-1
position: 6497689
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:6496378-6496927:-1:exon

position:6496927:-1
position: 6496927
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

HMGB2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 419612
gene: HMGB2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: high mobility group protein B2
translation: MGKGDPNKPRGKMSSYAFFVQTCREEHKKKHPDSSVNFAEFSKKCSERWKTMSAKEKSKFEDMAKSDKARYDREMKNYVPPKGDKKGKKKDPNAPKRPPSAFFLFCSEHRPKIKSEHPGLSIGDTAKKLGEMWSEQSAKDKQPYEQKAAKLKEKYEKDIAAYRAKGKSEAGKKGPGRPTGSKKKNEPEDEEEEEEEEEEEDEEEEDEDEE
SIO_010081: HMGB2
subclass of: SO_0000673
so part of: HMGB2
location: complement(join(6496766..6496927,6497515..6497689,6497772..6497917,6498135..6498284))
location: region:6496766-6498284:-1
so has part: feature:6498135-6498284:-1:exon
so has part: feature:6497772-6497917:-1:exon
so has part: feature:6497515-6497689:-1:exon
so has part: feature:6496766-6496927:-1:exon

XP_032326750.1
type: Protein
SIO_000068: ncbiprotein

position:6496766:-1
position: 6496766
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6498284:-1
position: 6498284
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6498135-6498284:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6497772-6497917:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6497515-6497689:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6496766-6496927:-1:exon

SAP30
type: Gene
subclass of: SO_0000704
RO_0002162: 419612
gene: SAP30
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 6521374..6526812
location: region:6521374-6526812:1
so has part: feature:6521374-6526812:1:exon
subclass of: SO_0000010

102508674
type: Gene
SIO_000068: ncbigene

position:6521374:1
position: 6521374
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6526812:1
position: 6526812
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6521374-6526812:1:exon

SAP30
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 419612
gene: SAP30
product: Sin3A associated protein 30
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 41 samples with support for all annotated introns
transcript id: XM_032470875.1
SIO_010081: SAP30
subclass of: SO_0000673
so part of: SAP30
location: join(6521374..6522012,6523595..6523720,6524299..6524397,6526475..6526812)
location: region:6521374-6526812:1
so has part: feature:6521374-6522012:1:exon
so has part: feature:6523595-6523720:1:exon
so has part: feature:6524299-6524397:1:exon
so has part: feature:6526475-6526812:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6521374-6522012:1:exon

position:6522012:1
position: 6522012
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:6523595-6523720:1:exon

position:6523595:1
position: 6523595
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6523720:1
position: 6523720
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:6524299-6524397:1:exon

position:6524299:1
position: 6524299
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6524397:1
position: 6524397
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:6526475-6526812:1:exon

position:6526475:1
position: 6526475
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

SAP30
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 419612
gene: SAP30
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: histone deacetylase complex subunit SAP30
translation: MNGFTPEDMSRGGDAAAAVAAVVAAAAAAAAASAGNGAGAGAGAEVPVAGAVSAAGPPGAAGPGPGQLCCLREDGERCGRAAGNASFSKRIQKSISQKKVKIELDKSARHLYICDYHKNLIQSVRNRRKRKGSDDDGGDSPVQDIDTPEVDLYQLQVNTLRRYKRHFKLPTRPGLNKAQLVEIVGCHFRSIPVNEKDTLTYFIYSVKNDKNKSDLKVDSGVH
SIO_010081: SAP30
subclass of: SO_0000673
so part of: SAP30
location: join(6521692..6522012,6523595..6523720,6524299..6524397,6526475..6526597)
location: region:6521692-6526597:1
so has part: feature:6521692-6522012:1:exon
so has part: feature:6523595-6523720:1:exon
so has part: feature:6524299-6524397:1:exon
so has part: feature:6526475-6526597:1:exon

XP_032326766.1
type: Protein
SIO_000068: ncbiprotein

position:6521692:1
position: 6521692
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6526597:1
position: 6526597
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6521692-6522012:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6523595-6523720:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6524299-6524397:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6526475-6526597:1:exon

SCRG1
type: Gene
subclass of: SO_0000704
RO_0002162: 419612
gene: SCRG1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(6535481..6549657)
location: region:6535481-6549657:-1
so has part: feature:6535481-6549657:-1:exon
subclass of: SO_0000010

106730901
type: Gene
SIO_000068: ncbigene

position:6535481:-1
position: 6535481
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6549657:-1
position: 6549657
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6535481-6549657:-1:exon

SCRG1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 419612
gene: SCRG1
product: stimulator of chondrogenesis 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 mRNAs, 3 Proteins, and 70% coverage of the annotated genomic feature by RNAseq alignments, including 12 samples with support for all annotated introns
transcript id: XM_032470962.1
SIO_010081: SCRG1
subclass of: SO_0000673
so part of: SCRG1
location: complement(join(6535481..6535989,6538532..6538787,6549536..6549657))
location: region:6535481-6549657:-1
so has part: feature:6549536-6549657:-1:exon
so has part: feature:6538532-6538787:-1:exon
so has part: feature:6535481-6535989:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6549536-6549657:-1:exon

position:6549536:-1
position: 6549536
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:6538532-6538787:-1:exon

position:6538532:-1
position: 6538532
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6538787:-1
position: 6538787
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:6535481-6535989:-1:exon

position:6535989:-1
position: 6535989
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

SCRG1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 419612
gene: SCRG1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: scrapie-responsive protein 1
translation: MKFILLAVTIGLTLLLGVQAMPANRLSCYGKILKDRNCHNLPEGVADLTKVDVNVQDHFWDGKGCEMICYCNFSELLCCPKDVFFGPKISFVIPCNRQ
SIO_010081: SCRG1
subclass of: SO_0000673
so part of: SCRG1
location: complement(join(6535935..6535989,6538532..6538773))
location: region:6535935-6538773:-1
so has part: feature:6538532-6538773:-1:exon
so has part: feature:6535935-6535989:-1:exon

XP_032326853.1
type: Protein
SIO_000068: ncbiprotein

position:6535935:-1
position: 6535935
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6538773:-1
position: 6538773
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6538532-6538773:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6535935-6535989:-1:exon

LOC106730902
type: Gene
subclass of: SO_0000704
RO_0002162: 419612
gene: LOC106730902
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(6573473..6647318)
location: region:6573473-6647318:-1
so has part: feature:6573473-6647318:-1:exon
subclass of: SO_0000010

106730902
type: Gene
SIO_000068: ncbigene

position:6573473:-1
position: 6573473
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6647318:-1
position: 6647318
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6573473-6647318:-1:exon

LOC106730902
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 419612
gene: LOC106730902
product: uncharacterized LOC106730902, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XR_004316413.1
SIO_010081: LOC106730902
so part of: LOC106730902
location: complement(join(6573473..6574055,6575726..6575871,6575971..6576075,6582981..6583112,6588818..6588920,6589259..6590394,6626742..6626875,6645482..6645589,6645680..6647318))
location: region:6573473-6647318:-1
so has part: feature:6645680-6647318:-1:exon
so has part: feature:6645482-6645589:-1:exon
so has part: feature:6626742-6626875:-1:exon
so has part: feature:6589259-6590394:-1:exon
so has part: feature:6588818-6588920:-1:exon
so has part: feature:6582981-6583112:-1:exon
so has part: feature:6575971-6576075:-1:exon
so has part: feature:6575726-6575871:-1:exon
so has part: feature:6573473-6574055:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6645680-6647318:-1:exon

position:6645680:-1
position: 6645680
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:6645482-6645589:-1:exon

position:6645482:-1
position: 6645482
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6645589:-1
position: 6645589
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:6626742-6626875:-1:exon

position:6626742:-1
position: 6626742
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6626875:-1
position: 6626875
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:6589259-6590394:-1:exon

position:6589259:-1
position: 6589259
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6590394:-1
position: 6590394
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:6588818-6588920:-1:exon

position:6588818:-1
position: 6588818
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6588920:-1
position: 6588920
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:6582981-6583112:-1:exon

position:6582981:-1
position: 6582981
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6583112:-1
position: 6583112
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:6575971-6576075:-1:exon

position:6575971:-1
position: 6575971
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6576075:-1
position: 6576075
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:6575726-6575871:-1:exon

position:6575726:-1
position: 6575726
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6575871:-1
position: 6575871
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:6573473-6574055:-1:exon

position:6574055:-1
position: 6574055
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC106730902
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 419612
gene: LOC106730902
product: uncharacterized LOC106730902, transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XR_004316414.1
SIO_010081: LOC106730902
so part of: LOC106730902
location: complement(join(6573473..6574055,6575726..6575871,6575971..6576075,6582981..6583112,6588818..6588920,6589259..6590394,6626742..6626875,6645669..6647318))
location: region:6573473-6647318:-1
so has part: feature:6645669-6647318:-1:exon
so has part: feature:6626742-6626875:-1:exon
so has part: feature:6589259-6590394:-1:exon
so has part: feature:6588818-6588920:-1:exon
so has part: feature:6582981-6583112:-1:exon
so has part: feature:6575971-6576075:-1:exon
so has part: feature:6575726-6575871:-1:exon
so has part: feature:6573473-6574055:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6645669-6647318:-1:exon

position:6645669:-1
position: 6645669
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:6626742-6626875:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6589259-6590394:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6588818-6588920:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6582981-6583112:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:6575971-6576075:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:6575726-6575871:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:6573473-6574055:-1:exon

LOC106730902
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 419612
gene: LOC106730902
product: uncharacterized LOC106730902, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XR_004316412.1
SIO_010081: LOC106730902
so part of: LOC106730902
location: complement(join(6573473..6574055,6575726..6575871,6575971..6576075,6582981..6583112,6626742..6626875,6645482..6645589,6645669..6647318))
location: region:6573473-6647318:-1
so has part: feature:6645669-6647318:-1:exon
so has part: feature:6645482-6645589:-1:exon
so has part: feature:6626742-6626875:-1:exon
so has part: feature:6582981-6583112:-1:exon
so has part: feature:6575971-6576075:-1:exon
so has part: feature:6575726-6575871:-1:exon
so has part: feature:6573473-6574055:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6645669-6647318:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6645482-6645589:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6626742-6626875:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6582981-6583112:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6575971-6576075:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:6575726-6575871:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:6573473-6574055:-1:exon

LOC106730902
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 419612
gene: LOC106730902
product: uncharacterized LOC106730902, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XR_004316410.1
SIO_010081: LOC106730902
so part of: LOC106730902
location: complement(join(6573473..6574055,6575726..6575871,6575971..6576075,6582981..6583112,6588818..6588920,6589259..6590394,6626742..6626875,6645482..6645589,6645669..6647318))
location: region:6573473-6647318:-1
so has part: feature:6645669-6647318:-1:exon
so has part: feature:6645482-6645589:-1:exon
so has part: feature:6626742-6626875:-1:exon
so has part: feature:6589259-6590394:-1:exon
so has part: feature:6588818-6588920:-1:exon
so has part: feature:6582981-6583112:-1:exon
so has part: feature:6575971-6576075:-1:exon
so has part: feature:6575726-6575871:-1:exon
so has part: feature:6573473-6574055:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6645669-6647318:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6645482-6645589:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6626742-6626875:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6589259-6590394:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6588818-6588920:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:6582981-6583112:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:6575971-6576075:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:6575726-6575871:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:6573473-6574055:-1:exon

LOC106730902
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 419612
gene: LOC106730902
product: uncharacterized LOC106730902, transcript variant X9
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XR_001367348.2
SIO_010081: LOC106730902
so part of: LOC106730902
location: complement(join(6573473..6574055,6575726..6575871,6575971..6576075,6582981..6583112,6583592..6586153))
location: region:6573473-6586153:-1
so has part: feature:6583592-6586153:-1:exon
so has part: feature:6582981-6583112:-1:exon
so has part: feature:6575971-6576075:-1:exon
so has part: feature:6575726-6575871:-1:exon
so has part: feature:6573473-6574055:-1:exon

position:6586153:-1
position: 6586153
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6583592-6586153:-1:exon

position:6583592:-1
position: 6583592
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:6582981-6583112:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6575971-6576075:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6575726-6575871:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6573473-6574055:-1:exon

LOC106730902
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 419612
gene: LOC106730902
product: uncharacterized LOC106730902, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XR_004316411.1
SIO_010081: LOC106730902
so part of: LOC106730902
location: complement(join(6575062..6575871,6575971..6576075,6582981..6583112,6588818..6588920,6589259..6590394,6626742..6626875,6645482..6645589,6645669..6647318))
location: region:6575062-6647318:-1
so has part: feature:6645669-6647318:-1:exon
so has part: feature:6645482-6645589:-1:exon
so has part: feature:6626742-6626875:-1:exon
so has part: feature:6589259-6590394:-1:exon
so has part: feature:6588818-6588920:-1:exon
so has part: feature:6582981-6583112:-1:exon
so has part: feature:6575971-6576075:-1:exon
so has part: feature:6575062-6575871:-1:exon

position:6575062:-1
position: 6575062
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6645669-6647318:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6645482-6645589:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6626742-6626875:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6589259-6590394:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6588818-6588920:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:6582981-6583112:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:6575971-6576075:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:6575062-6575871:-1:exon

LOC106730902
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 419612
gene: LOC106730902
product: uncharacterized LOC106730902, transcript variant X7
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XR_004316415.1
SIO_010081: LOC106730902
so part of: LOC106730902
location: complement(join(6604398..6605103,6626742..6626875,6645482..6645589,6645669..6647318))
location: region:6604398-6647318:-1
so has part: feature:6645669-6647318:-1:exon
so has part: feature:6645482-6645589:-1:exon
so has part: feature:6626742-6626875:-1:exon
so has part: feature:6604398-6605103:-1:exon

position:6604398:-1
position: 6604398
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6645669-6647318:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6645482-6645589:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6626742-6626875:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6604398-6605103:-1:exon

position:6605103:-1
position: 6605103
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC106730902
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 419612
gene: LOC106730902
product: uncharacterized LOC106730902, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_032470958.1
SIO_010081: LOC106730902
subclass of: SO_0000673
so part of: LOC106730902
location: complement(join(6635577..6636952,6645482..6645589,6645680..6647318))
location: region:6635577-6647318:-1
so has part: feature:6645680-6647318:-1:exon
so has part: feature:6645482-6645589:-1:exon
so has part: feature:6635577-6636952:-1:exon

position:6635577:-1
position: 6635577
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6645680-6647318:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6645482-6645589:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6635577-6636952:-1:exon

position:6636952:-1
position: 6636952
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC106730902
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 419612
gene: LOC106730902
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC106730902
translation: MGPLLYGRLSFSAENLPSLLNVFKNLLQILQVASCKTEKVQPKATRLLRAQTWRAWWFLFARPQRRAVDSAPRGPKAIRRFPSPPGGTPRSPRTTARGGPMSAGQARAPTGSGSGGRRGGSELTGKAGPRRPEAGGARGGAASPAGRPRPPPRGGPTRRSRPRTLLLAAAVGGAPGATREAQAWRTETGGRGLASAGFRPLRPGPRRPTSRRGSALWAVLRARADLPSACTRCPGITRFCGSDLGSKPCYLHQLIRVTAATHSGIRLVLVLQNKLRRLFPNLYHLPPTTLSPRGSDAAGFTEGGRLSCPARGSESRKRERVEQVSKPDEAPDEARARIQREAFTPPPPGSRALLQPLPVSLGGYRARSRRKRAGDDL
SIO_010081: LOC106730902
subclass of: SO_0000673
so part of: LOC106730902
location: complement(join(6636055..6636952,6645482..6645589,6645680..6645807))
location: region:6636055-6645807:-1
so has part: feature:6645680-6645807:-1:exon
so has part: feature:6645482-6645589:-1:exon
so has part: feature:6636055-6636952:-1:exon

XP_032326849.1
type: Protein
SIO_000068: ncbiprotein

position:6636055:-1
position: 6636055
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6645807:-1
position: 6645807
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6645680-6645807:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6645482-6645589:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6636055-6636952:-1:exon

LOC106730902
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 419612
gene: LOC106730902
product: uncharacterized LOC106730902, transcript variant X8
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
transcript id: XR_004316416.1
SIO_010081: LOC106730902
so part of: LOC106730902
location: complement(join(6641611..6642130,6642428..6642535,6645482..6645589,6645669..6647318))
location: region:6641611-6647318:-1
so has part: feature:6645669-6647318:-1:exon
so has part: feature:6645482-6645589:-1:exon
so has part: feature:6642428-6642535:-1:exon
so has part: feature:6641611-6642130:-1:exon

position:6641611:-1
position: 6641611
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6645669-6647318:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6645482-6645589:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6642428-6642535:-1:exon

position:6642428:-1
position: 6642428
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6642535:-1
position: 6642535
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:6641611-6642130:-1:exon

position:6642130:-1
position: 6642130
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

HAND2
type: Gene
subclass of: SO_0000704
RO_0002162: 419612
gene: HAND2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(6653170..6655958)
location: region:6653170-6655958:-1
so has part: feature:6653170-6655958:-1:exon
subclass of: SO_0000010

102506633
type: Gene
SIO_000068: ncbigene

position:6653170:-1
position: 6653170
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6655958:-1
position: 6655958
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6653170-6655958:-1:exon

HAND2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 419612
gene: HAND2
product: heart and neural crest derivatives expressed 2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 31 samples with support for all annotated introns
transcript id: XM_032470959.1
SIO_010081: HAND2
subclass of: SO_0000673
so part of: HAND2
location: complement(join(6653170..6653953,6655328..6655958))
location: region:6653170-6655958:-1
so has part: feature:6655328-6655958:-1:exon
so has part: feature:6653170-6653953:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6655328-6655958:-1:exon

position:6655328:-1
position: 6655328
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:6653170-6653953:-1:exon

position:6653953:-1
position: 6653953
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

HAND2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 419612
gene: HAND2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: heart- and neural crest derivatives-expressed protein 2
translation: MSLVGGFPHHPVVHHEGYPFAAAAAAAAAAAASRCSHEENPYFHGWLIGHPEMSPPDYSMALSYSPEYASGAAGLDHSHYGGVPPGAGPPGLGGPRPVKRRGTANRKERRRTQSINSAFAELRECIPNVPADTKLSKIKTLRLATSYIAYLMDLLAKDDQNGEAEAFKAEIKKTDVKEEKRKKELNEILKSTVSSNDKKTKGRTGWPQHVWALELKQ
SIO_010081: HAND2
subclass of: SO_0000673
so part of: HAND2
location: complement(join(6653855..6653953,6655328..6655882))
location: region:6653855-6655882:-1
so has part: feature:6655328-6655882:-1:exon
so has part: feature:6653855-6653953:-1:exon

XP_032326850.1
type: Protein
SIO_000068: ncbiprotein

position:6653855:-1
position: 6653855
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6655882:-1
position: 6655882
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6655328-6655882:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6653855-6653953:-1:exon

TRNAG-ACC
type: Gene
subclass of: SO_0000704
RO_0002162: 419612
gene: TRNAG-ACC
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
so part of: sequence
location: 6693367..6693439
location: region:6693367-6693439:1
so has part: feature:6693367-6693439:1:exon
subclass of: SO_0000663

116660845
type: Gene
SIO_000068: ncbigene

position:6693367:1
position: 6693367
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6693439:1
position: 6693439
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6693367-6693439:1:exon

TRNAG-ACC
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 419612
gene: TRNAG-ACC
product: tRNA-Gly
inference: COORDINATES: profile:tRNAscan-SE:1.23
note: transfer RNA glycine (anticodon ACC); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:6693400..6693402,aa:Gly,seq:acc)
SIO_010081: TRNAG-ACC
subclass of: SO_0000673
so part of: TRNAG-ACC
location: 6693367..6693439
location: region:6693367-6693439:1
so has part: feature:6693367-6693439:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6693367-6693439:1:exon

FBXO8
type: Gene
subclass of: SO_0000704
RO_0002162: 419612
gene: FBXO8
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(7107437..7142170)
location: region:7107437-7142170:-1
so has part: feature:7107437-7142170:-1:exon
subclass of: SO_0000010

102514700
type: Gene
SIO_000068: ncbigene

position:7107437:-1
position: 7107437
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7142170:-1
position: 7142170
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7107437-7142170:-1:exon

FBXO8
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 419612
gene: FBXO8
product: F-box protein 8
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 mRNAs, 10 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 42 samples with support for all annotated introns
transcript id: XM_006194544.3
SIO_010081: FBXO8
subclass of: SO_0000673
so part of: FBXO8
location: complement(join(7107437..7108075,7109099..7109295,7111189..7111307,7125843..7125969,7128215..7128551,7141924..7142170))
location: region:7107437-7142170:-1
so has part: feature:7141924-7142170:-1:exon
so has part: feature:7128215-7128551:-1:exon
so has part: feature:7125843-7125969:-1:exon
so has part: feature:7111189-7111307:-1:exon
so has part: feature:7109099-7109295:-1:exon
so has part: feature:7107437-7108075:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:7141924-7142170:-1:exon

position:7141924:-1
position: 7141924
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:7128215-7128551:-1:exon

position:7128215:-1
position: 7128215
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7128551:-1
position: 7128551
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:7125843-7125969:-1:exon

position:7125843:-1
position: 7125843
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7125969:-1
position: 7125969
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:7111189-7111307:-1:exon

position:7111189:-1
position: 7111189
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7111307:-1
position: 7111307
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:7109099-7109295:-1:exon

position:7109099:-1
position: 7109099
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7109295:-1
position: 7109295
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:7107437-7108075:-1:exon

position:7108075:-1
position: 7108075
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

FBXO8
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 419612
gene: FBXO8
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: F-box only protein 8
translation: MGQGLWRVARNQQLQQESYGEQGYLSREQSRRMAASSVSSTSHRKQVQGGIDIYHLLKTRKSKEQEGFINLEMLPPELSFTILSYLNATDLCLASCVWQDLANDELLWQGLCKSTWGHCSIYNKNPPLGFSFRKLYMQLDEGSLTFNASPDEGVNYLMSKGILDDSPKEIAKFIFCTRTLNWKKLRIYLDERRDVLDDLVTLHNFRNQFLPNALREFFRHIHAPEERGEYLETLITKFSHRFCACNPDLMRELGLSPDGVYVLCYSLILLSIDLTSPHVKNKMSKREFIRNTRRAAQNISEDFVGHLYDNIYLIGHVAA
SIO_010081: FBXO8
subclass of: SO_0000673
so part of: FBXO8
location: complement(join(7107888..7108075,7109099..7109295,7111189..7111307,7125843..7125969,7128215..7128543))
location: region:7107888-7128543:-1
so has part: feature:7128215-7128543:-1:exon
so has part: feature:7125843-7125969:-1:exon
so has part: feature:7111189-7111307:-1:exon
so has part: feature:7109099-7109295:-1:exon
so has part: feature:7107888-7108075:-1:exon

XP_006194606.1
type: Protein
SIO_000068: ncbiprotein

position:7107888:-1
position: 7107888
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7128543:-1
position: 7128543
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7128215-7128543:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7125843-7125969:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7111189-7111307:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7109099-7109295:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:7107888-7108075:-1:exon

CEP44
type: Gene
subclass of: SO_0000704
RO_0002162: 419612
gene: CEP44
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 7142468..7160612
location: region:7142468-7160612:1
so has part: feature:7142468-7160612:1:exon
subclass of: SO_0000010

102515238
type: Gene
SIO_000068: ncbigene

position:7142468:1
position: 7142468
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7160612:1
position: 7160612
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7142468-7160612:1:exon

CEP44
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 419612
gene: CEP44
product: centrosomal protein 44, transcript variant X7
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 35 samples with support for all annotated introns
transcript id: XM_032471180.1
SIO_010081: CEP44
subclass of: SO_0000673
so part of: CEP44
location: join(7142468..7142678,7144907..7144954,7147807..7147941,7150695..7150842,7152372..7152518,7152873..7152995,7154181..7154345,7155699..7155905,7156397..7156472,7158921..7159045,7159296..7159333,7160096..7160612)
location: region:7142468-7160612:1
so has part: feature:7142468-7142678:1:exon
so has part: feature:7144907-7144954:1:exon
so has part: feature:7147807-7147941:1:exon
so has part: feature:7150695-7150842:1:exon
so has part: feature:7152372-7152518:1:exon
so has part: feature:7152873-7152995:1:exon
so has part: feature:7154181-7154345:1:exon
so has part: feature:7155699-7155905:1:exon
so has part: feature:7156397-7156472:1:exon
so has part: feature:7158921-7159045:1:exon
so has part: feature:7159296-7159333:1:exon
so has part: feature:7160096-7160612:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:7142468-7142678:1:exon

position:7142678:1
position: 7142678
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:7144907-7144954:1:exon

position:7144907:1
position: 7144907
reference: sequence
type: ForwardStrandPosition
type: ExactPosition