Camelus ferus isolate YT-003-E chromosome 29, BCGSAC_Cfer_1.0, whole genome shotgun sequence.
type: Entry
definition: Camelus ferus isolate YT-003-E chromosome 29, BCGSAC_Cfer_1.0, whole genome shotgun sequence.
sequence version: NC_045724.1
sequence date: 2020-02-19
sequence: sequence
division: CON
label: NC_045724.1
type: RefSeq
SIO_000068: refseq
dblink: PRJNA605179
dblink: SAMN12102236
keyword: WGS
keyword: RefSeq
source: Camelus ferus (Wild Bactrian camel)
organism: Camelus ferus
taxonomy: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Tylopoda; Camelidae; Camelus.
comment: REFSEQ INFORMATION: The reference sequence is identical to\nCM020796.1.\nAssembly name: BCGSAC_Cfer_1.0\nThe genomic sequence for this RefSeq record is from the\nwhole-genome assembly released by The Bactrian Camels Genome\nSequencing and Analysis Consortium on 2020/01/08. The original\nwhole-genome shotgun project has the accession VSZR00000000.1.\n\n##Genome-Assembly-Data-START##\nAssembly Provider :: The Bactrian Camels Genome Sequencing and\n Analysis Consortium\nAssembly Method :: FALCON v. FEB-2018; LACHESIS v. MAR-2018\nAssembly Name :: BCGSAC_Cfer_1.0\nGenome Representation :: Full\nExpected Final Version :: Yes\nGenome Coverage :: 50.0x\nSequencing Technology :: PacBio Sequel; Hi-C\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI\nAnnotation Status :: Full annotation\nAnnotation Name :: Camelus ferus Annotation Release 102\nAnnotation Version :: 102\nAnnotation Pipeline :: NCBI eukaryotic genome annotation\n pipeline\nAnnotation Software Version :: 8.3\nAnnotation Method :: Best-placed RefSeq; Gnomon\nFeatures Annotated :: Gene; mRNA; CDS; ncRNA\n##Genome-Annotation-Data-END##

sequence
subclass of: SO_0000340
sequence length: 28622024
topology: linear
so has quality: SO_0000987
location: 1..28622024
location: region:1-28622024:1
RO_0002162: 419612

NC_045724
type: RefSeq
SIO_000068: refseq

PRJNA605179
type: BioProject
SIO_000068: bioproject

SAMN12102236
type: BioSample
SIO_000068: biosample

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:28622024:1
position: 28622024
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-28622024:1:source
so part of: sequence
organism: Camelus ferus
mol type: genomic DNA
isolate: YT-003-E
chromosome: 29
sex: male
tissue type: ear skin
country: Mongolia

419612
type: Taxonomy
SIO_000068: taxonomy

LOC116660431
type: Gene
subclass of: SO_0000704
RO_0002162: 419612
gene: LOC116660431
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(526116..>528381)
location: region:526116-528381:-1
so has part: feature:526116-528381:-1:exon
subclass of: SO_0000010

116660431
type: Gene
SIO_000068: ncbigene

position:526116:-1
position: 526116
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:528381:-1
position: 528381
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:526116-528381:-1:exon

LOC116660431
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 419612
gene: LOC116660431
product: glutamate receptor ionotropic, NMDA 2C-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_032469906.1
SIO_010081: LOC116660431
subclass of: SO_0000673
so part of: LOC116660431
location: complement(526116..>528381)
location: region:526116-528381:-1
so has part: feature:526116-528381:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:526116-528381:-1:exon

LOC116660431
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 419612
gene: LOC116660431
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: glutamate receptor ionotropic, NMDA 2C-like
translation: RWPSPPLCLSFLFVPLPPSPCLPWSLCRTLWWTWWGALGPALLLTSLLDAWAGLGPGQGEQAVMVAMVFGSSGPLQAQAHTRLIPQSFLDLLLEIQPLTVGVNTTNPSSLLTQICGLLGAARVQGIVSEGNVGTEAVAQILDVISSQPLVPILSISGGSAVVLTPKVPVQNHVPSSLEPGARLGLGEWG
SIO_010081: LOC116660431
subclass of: SO_0000673
so part of: LOC116660431
location: complement(527812..>528381)
location: region:527812-528381:-1
so has part: feature:527812-528381:-1:exon

XP_032325797.1
type: Protein
SIO_000068: ncbiprotein

position:527812:-1
position: 527812
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:527812-528381:-1:exon

LOC116660536
type: Gene
subclass of: SO_0000704
RO_0002162: 419612
gene: LOC116660536
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(531247..551325)
location: region:531247-551325:-1
so has part: feature:531247-551325:-1:exon
subclass of: SO_0000011

116660536
type: Gene
SIO_000068: ncbigene

position:531247:-1
position: 531247
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:551325:-1
position: 551325
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:531247-551325:-1:exon

LOC116660536
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 419612
nc RNA class: lncRNA
gene: LOC116660536
product: uncharacterized LOC116660536
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XR_004316124.1
SIO_010081: LOC116660536
subclass of: SO_0000673
so part of: LOC116660536
location: complement(join(531247..531322,531847..538705,540005..540267,541169..541450,550154..550769,551060..551325))
location: region:531247-551325:-1
so has part: feature:551060-551325:-1:exon
so has part: feature:550154-550769:-1:exon
so has part: feature:541169-541450:-1:exon
so has part: feature:540005-540267:-1:exon
so has part: feature:531847-538705:-1:exon
so has part: feature:531247-531322:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:551060-551325:-1:exon

position:551060:-1
position: 551060
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:550154-550769:-1:exon

position:550154:-1
position: 550154
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:550769:-1
position: 550769
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:541169-541450:-1:exon

position:541169:-1
position: 541169
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:541450:-1
position: 541450
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:540005-540267:-1:exon

position:540005:-1
position: 540005
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:540267:-1
position: 540267
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:531847-538705:-1:exon

position:531847:-1
position: 531847
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:538705:-1
position: 538705
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:531247-531322:-1:exon

position:531322:-1
position: 531322
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC116660535
type: Gene
subclass of: SO_0000704
RO_0002162: 419612
gene: LOC116660535
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: 554524..564802
location: region:554524-564802:1
so has part: feature:554524-564802:1:exon

116660535
type: Gene
SIO_000068: ncbigene

position:554524:1
position: 554524
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:564802:1
position: 564802
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:554524-564802:1:exon

LOC116660535
type: Exon
subclass of: SO_0000147
RO_0002162: 419612
gene: LOC116660535
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins, and 89% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
pseudo: true
SIO_010081: LOC116660535
subclass of: SO_0000673
so part of: LOC116660535
location: 554524..554620
location: region:554524-554620:1
so has part: feature:554524-554620:1:exon

position:554620:1
position: 554620
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:554524-554620:1:exon

LOC102523880
type: Gene
subclass of: SO_0000704
RO_0002162: 419612
gene: LOC102523880
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: complement(559830..560310)
location: region:559830-560310:-1
so has part: feature:559830-560310:-1:exon

102523880
type: Gene
SIO_000068: ncbigene

position:559830:-1
position: 559830
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:560310:-1
position: 560310
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:559830-560310:-1:exon

LOC102523880
type: Exon
subclass of: SO_0000147
RO_0002162: 419612
gene: LOC102523880
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 66% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC102523880
subclass of: SO_0000673
so part of: LOC102523880
location: complement(559830..560310)
location: region:559830-560310:-1
so has part: feature:559830-560310:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:559830-560310:-1:exon

LOC116660557
type: Gene
subclass of: SO_0000704
RO_0002162: 419612
gene: LOC116660557
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: 562697..562799
location: region:562697-562799:1
so has part: feature:562697-562799:1:exon
subclass of: SO_0000623

116660557
type: Gene
SIO_000068: ncbigene

position:562697:1
position: 562697
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:562799:1
position: 562799
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:562697-562799:1:exon

LOC116660557
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 419612
nc RNA class: snRNA
gene: LOC116660557
product: U6 spliceosomal RNA
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00026
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_004316152.1
SIO_010081: LOC116660557
subclass of: SO_0000673
so part of: LOC116660557
location: 562697..562799
location: region:562697-562799:1
so has part: feature:562697-562799:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:562697-562799:1:exon

LOC116660535
type: Exon
subclass of: SO_0000147
RO_0002162: 419612
gene: LOC116660535
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins, and 89% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
pseudo: true
SIO_010081: LOC116660535
subclass of: SO_0000673
so part of: LOC116660535
location: 564297..564802
location: region:564297-564802:1
so has part: feature:564297-564802:1:exon

position:564297:1
position: 564297
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:564297-564802:1:exon

LOC116660432
type: Gene
subclass of: SO_0000704
RO_0002162: 419612
gene: LOC116660432
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: complement(611223..674137)
location: region:611223-674137:-1
so has part: feature:611223-674137:-1:exon

116660432
type: Gene
SIO_000068: ncbigene

position:611223:-1
position: 611223
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:674137:-1
position: 674137
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:611223-674137:-1:exon

LOC116660432
type: Exon
subclass of: SO_0000147
RO_0002162: 419612
gene: LOC116660432
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 48% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC116660432
subclass of: SO_0000673
so part of: LOC116660432
location: complement(611223..611495)
location: region:611223-611495:-1
so has part: feature:611223-611495:-1:exon

position:611495:-1
position: 611495
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:611223-611495:-1:exon

LOC116660432
type: Exon
subclass of: SO_0000147
RO_0002162: 419612
gene: LOC116660432
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 48% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC116660432
subclass of: SO_0000673
so part of: LOC116660432
location: complement(611912..611947)
location: region:611912-611947:-1
so has part: feature:611912-611947:-1:exon

position:611912:-1
position: 611912
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:611947:-1
position: 611947
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:611912-611947:-1:exon

LOC116660432
type: Exon
subclass of: SO_0000147
RO_0002162: 419612
gene: LOC116660432
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 48% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC116660432
subclass of: SO_0000673
so part of: LOC116660432
location: complement(613409..613535)
location: region:613409-613535:-1
so has part: feature:613409-613535:-1:exon

position:613409:-1
position: 613409
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:613535:-1
position: 613535
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:613409-613535:-1:exon

LOC116660432
type: Exon
subclass of: SO_0000147
RO_0002162: 419612
gene: LOC116660432
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 48% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC116660432
subclass of: SO_0000673
so part of: LOC116660432
location: complement(613980..614143)
location: region:613980-614143:-1
so has part: feature:613980-614143:-1:exon

position:613980:-1
position: 613980
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:614143:-1
position: 614143
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:613980-614143:-1:exon

LOC116660432
type: Exon
subclass of: SO_0000147
RO_0002162: 419612
gene: LOC116660432
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 48% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC116660432
subclass of: SO_0000673
so part of: LOC116660432
location: complement(614258..614414)
location: region:614258-614414:-1
so has part: feature:614258-614414:-1:exon

position:614258:-1
position: 614258
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:614414:-1
position: 614414
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:614258-614414:-1:exon

LOC116660432
type: Exon
subclass of: SO_0000147
RO_0002162: 419612
gene: LOC116660432
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 48% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC116660432
subclass of: SO_0000673
so part of: LOC116660432
location: complement(614922..615042)
location: region:614922-615042:-1
so has part: feature:614922-615042:-1:exon

position:614922:-1
position: 614922
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:615042:-1
position: 615042
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:614922-615042:-1:exon

LOC116660432
type: Exon
subclass of: SO_0000147
RO_0002162: 419612
gene: LOC116660432
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 48% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC116660432
subclass of: SO_0000673
so part of: LOC116660432
location: complement(615247..615410)
location: region:615247-615410:-1
so has part: feature:615247-615410:-1:exon

position:615247:-1
position: 615247
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:615410:-1
position: 615410
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:615247-615410:-1:exon

LOC116660432
type: Exon
subclass of: SO_0000147
RO_0002162: 419612
gene: LOC116660432
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 48% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC116660432
subclass of: SO_0000673
so part of: LOC116660432
location: complement(616059..616191)
location: region:616059-616191:-1
so has part: feature:616059-616191:-1:exon

position:616059:-1
position: 616059
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:616191:-1
position: 616191
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:616059-616191:-1:exon

LOC116660432
type: Exon
subclass of: SO_0000147
RO_0002162: 419612
gene: LOC116660432
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 48% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC116660432
subclass of: SO_0000673
so part of: LOC116660432
location: complement(616583..616704)
location: region:616583-616704:-1
so has part: feature:616583-616704:-1:exon

position:616583:-1
position: 616583
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:616704:-1
position: 616704
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:616583-616704:-1:exon

LOC116660432
type: Exon
subclass of: SO_0000147
RO_0002162: 419612
gene: LOC116660432
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 48% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC116660432
subclass of: SO_0000673
so part of: LOC116660432
location: complement(616812..617005)
location: region:616812-617005:-1
so has part: feature:616812-617005:-1:exon

position:616812:-1
position: 616812
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:617005:-1
position: 617005
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:616812-617005:-1:exon

LOC116660432
type: Exon
subclass of: SO_0000147
RO_0002162: 419612
gene: LOC116660432
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 48% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC116660432
subclass of: SO_0000673
so part of: LOC116660432
location: complement(617323..617472)
location: region:617323-617472:-1
so has part: feature:617323-617472:-1:exon

position:617323:-1
position: 617323
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:617472:-1
position: 617472
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:617323-617472:-1:exon

LOC116660432
type: Exon
subclass of: SO_0000147
RO_0002162: 419612
gene: LOC116660432
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 48% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC116660432
subclass of: SO_0000673
so part of: LOC116660432
location: complement(617762..617879)
location: region:617762-617879:-1
so has part: feature:617762-617879:-1:exon

position:617762:-1
position: 617762
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:617879:-1
position: 617879
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:617762-617879:-1:exon

LOC116660432
type: Exon
subclass of: SO_0000147
RO_0002162: 419612
gene: LOC116660432
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 48% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC116660432
subclass of: SO_0000673
so part of: LOC116660432
location: complement(618038..618128)
location: region:618038-618128:-1
so has part: feature:618038-618128:-1:exon

position:618038:-1
position: 618038
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:618128:-1
position: 618128
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:618038-618128:-1:exon

LOC116660432
type: Exon
subclass of: SO_0000147
RO_0002162: 419612
gene: LOC116660432
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 48% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC116660432
subclass of: SO_0000673
so part of: LOC116660432
location: complement(618265..618347)
location: region:618265-618347:-1
so has part: feature:618265-618347:-1:exon

position:618265:-1
position: 618265
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:618347:-1
position: 618347
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:618265-618347:-1:exon

LOC116660432
type: Exon
subclass of: SO_0000147
RO_0002162: 419612
gene: LOC116660432
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 48% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC116660432
subclass of: SO_0000673
so part of: LOC116660432
location: complement(618703..618721)
location: region:618703-618721:-1
so has part: feature:618703-618721:-1:exon

position:618703:-1
position: 618703
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:618721:-1
position: 618721
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:618703-618721:-1:exon

LOC116660432
type: Exon
subclass of: SO_0000147
RO_0002162: 419612
gene: LOC116660432
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 48% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC116660432
subclass of: SO_0000673
so part of: LOC116660432
location: complement(618902..619023)
location: region:618902-619023:-1
so has part: feature:618902-619023:-1:exon

position:618902:-1
position: 618902
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:619023:-1
position: 619023
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:618902-619023:-1:exon

LOC116660432
type: Exon
subclass of: SO_0000147
RO_0002162: 419612
gene: LOC116660432
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 48% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC116660432
subclass of: SO_0000673
so part of: LOC116660432
location: complement(619150..619330)
location: region:619150-619330:-1
so has part: feature:619150-619330:-1:exon

position:619150:-1
position: 619150
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:619330:-1
position: 619330
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:619150-619330:-1:exon

LOC116660432
type: Exon
subclass of: SO_0000147
RO_0002162: 419612
gene: LOC116660432
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 48% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC116660432
subclass of: SO_0000673
so part of: LOC116660432
location: complement(619831..619939)
location: region:619831-619939:-1
so has part: feature:619831-619939:-1:exon

position:619831:-1
position: 619831
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:619939:-1
position: 619939
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:619831-619939:-1:exon

LOC116660432
type: Exon
subclass of: SO_0000147
RO_0002162: 419612
gene: LOC116660432
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 48% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC116660432
subclass of: SO_0000673
so part of: LOC116660432
location: complement(620406..620628)
location: region:620406-620628:-1
so has part: feature:620406-620628:-1:exon

position:620406:-1
position: 620406
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:620628:-1
position: 620628
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:620406-620628:-1:exon

LOC116660432
type: Exon
subclass of: SO_0000147
RO_0002162: 419612
gene: LOC116660432
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 48% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC116660432
subclass of: SO_0000673
so part of: LOC116660432
location: complement(620848..620966)
location: region:620848-620966:-1
so has part: feature:620848-620966:-1:exon

position:620848:-1
position: 620848
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:620966:-1
position: 620966
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:620848-620966:-1:exon

LOC116660432
type: Exon
subclass of: SO_0000147
RO_0002162: 419612
gene: LOC116660432
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 48% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC116660432
subclass of: SO_0000673
so part of: LOC116660432
location: complement(621254..621698)
location: region:621254-621698:-1
so has part: feature:621254-621698:-1:exon

position:621254:-1
position: 621254
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:621698:-1
position: 621698
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:621254-621698:-1:exon

LOC116660432
type: Exon
subclass of: SO_0000147
RO_0002162: 419612
gene: LOC116660432
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 48% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC116660432
subclass of: SO_0000673
so part of: LOC116660432
location: complement(623159..623262)
location: region:623159-623262:-1
so has part: feature:623159-623262:-1:exon

position:623159:-1
position: 623159
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:623262:-1
position: 623262
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:623159-623262:-1:exon

LOC116660432
type: Exon
subclass of: SO_0000147
RO_0002162: 419612
gene: LOC116660432
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 48% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC116660432
subclass of: SO_0000673
so part of: LOC116660432
location: complement(623677..623739)
location: region:623677-623739:-1
so has part: feature:623677-623739:-1:exon

position:623677:-1
position: 623677
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:623739:-1
position: 623739
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:623677-623739:-1:exon

LOC116660432
type: Exon
subclass of: SO_0000147
RO_0002162: 419612
gene: LOC116660432
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 48% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC116660432
subclass of: SO_0000673
so part of: LOC116660432
location: complement(627998..628128)
location: region:627998-628128:-1
so has part: feature:627998-628128:-1:exon

position:627998:-1
position: 627998
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:628128:-1
position: 628128
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:627998-628128:-1:exon

LOC116660432
type: Exon
subclass of: SO_0000147
RO_0002162: 419612
gene: LOC116660432
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 48% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC116660432
subclass of: SO_0000673
so part of: LOC116660432
location: complement(631757..631839)
location: region:631757-631839:-1
so has part: feature:631757-631839:-1:exon

position:631757:-1
position: 631757
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:631839:-1
position: 631839
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:631757-631839:-1:exon

LOC116660432
type: Exon
subclass of: SO_0000147
RO_0002162: 419612
gene: LOC116660432
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 48% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC116660432
subclass of: SO_0000673
so part of: LOC116660432
location: complement(632302..632422)
location: region:632302-632422:-1
so has part: feature:632302-632422:-1:exon

position:632302:-1
position: 632302
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:632422:-1
position: 632422
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:632302-632422:-1:exon

LOC116660432
type: Exon
subclass of: SO_0000147
RO_0002162: 419612
gene: LOC116660432
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 48% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC116660432
subclass of: SO_0000673
so part of: LOC116660432
location: complement(633794..633867)
location: region:633794-633867:-1
so has part: feature:633794-633867:-1:exon

position:633794:-1
position: 633794
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:633867:-1
position: 633867
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:633794-633867:-1:exon

LOC116660432
type: Exon
subclass of: SO_0000147
RO_0002162: 419612
gene: LOC116660432
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 48% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC116660432
subclass of: SO_0000673
so part of: LOC116660432
location: complement(635614..635755)
location: region:635614-635755:-1
so has part: feature:635614-635755:-1:exon

position:635614:-1
position: 635614
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:635755:-1
position: 635755
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:635614-635755:-1:exon

LOC116660432
type: Exon
subclass of: SO_0000147
RO_0002162: 419612
gene: LOC116660432
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 48% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC116660432
subclass of: SO_0000673
so part of: LOC116660432
location: complement(638473..638531)
location: region:638473-638531:-1
so has part: feature:638473-638531:-1:exon

position:638473:-1
position: 638473
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:638531:-1
position: 638531
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:638473-638531:-1:exon

LOC116660432
type: Exon
subclass of: SO_0000147
RO_0002162: 419612
gene: LOC116660432
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 48% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC116660432
subclass of: SO_0000673
so part of: LOC116660432
location: complement(639182..639421)
location: region:639182-639421:-1
so has part: feature:639182-639421:-1:exon

position:639182:-1
position: 639182
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:639421:-1
position: 639421
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:639182-639421:-1:exon

LOC116660432
type: Exon
subclass of: SO_0000147
RO_0002162: 419612
gene: LOC116660432
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 48% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC116660432
subclass of: SO_0000673
so part of: LOC116660432
location: complement(640247..640477)
location: region:640247-640477:-1
so has part: feature:640247-640477:-1:exon

position:640247:-1
position: 640247
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:640477:-1
position: 640477
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:640247-640477:-1:exon

LOC116660432
type: Exon
subclass of: SO_0000147
RO_0002162: 419612
gene: LOC116660432
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 48% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC116660432
subclass of: SO_0000673
so part of: LOC116660432
location: complement(642670..642777)
location: region:642670-642777:-1
so has part: feature:642670-642777:-1:exon

position:642670:-1
position: 642670
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:642777:-1
position: 642777
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:642670-642777:-1:exon

LOC116660432
type: Exon
subclass of: SO_0000147
RO_0002162: 419612
gene: LOC116660432
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 48% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC116660432
subclass of: SO_0000673
so part of: LOC116660432
location: complement(643449..643614)
location: region:643449-643614:-1
so has part: feature:643449-643614:-1:exon

position:643449:-1
position: 643449
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:643614:-1
position: 643614
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:643449-643614:-1:exon

LOC116660432
type: Exon
subclass of: SO_0000147
RO_0002162: 419612
gene: LOC116660432
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 48% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC116660432
subclass of: SO_0000673
so part of: LOC116660432
location: complement(651779..651863)
location: region:651779-651863:-1
so has part: feature:651779-651863:-1:exon

position:651779:-1
position: 651779
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:651863:-1
position: 651863
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:651779-651863:-1:exon

LOC116660432
type: Exon
subclass of: SO_0000147
RO_0002162: 419612
gene: LOC116660432
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 48% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC116660432
subclass of: SO_0000673
so part of: LOC116660432
location: complement(653844..653986)
location: region:653844-653986:-1
so has part: feature:653844-653986:-1:exon

position:653844:-1
position: 653844
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:653986:-1
position: 653986
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:653844-653986:-1:exon

LOC116660432
type: Exon
subclass of: SO_0000147
RO_0002162: 419612
gene: LOC116660432
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 48% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC116660432
subclass of: SO_0000673
so part of: LOC116660432
location: complement(656755..656820)
location: region:656755-656820:-1
so has part: feature:656755-656820:-1:exon

position:656755:-1
position: 656755
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:656820:-1
position: 656820
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:656755-656820:-1:exon

LOC116660432
type: Exon
subclass of: SO_0000147
RO_0002162: 419612
gene: LOC116660432
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 48% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC116660432
subclass of: SO_0000673
so part of: LOC116660432
location: complement(657828..657983)
location: region:657828-657983:-1
so has part: feature:657828-657983:-1:exon

position:657828:-1
position: 657828
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:657983:-1
position: 657983
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:657828-657983:-1:exon

LOC116660432
type: Exon
subclass of: SO_0000147
RO_0002162: 419612
gene: LOC116660432
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 48% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC116660432
subclass of: SO_0000673
so part of: LOC116660432
location: complement(658427..658618)
location: region:658427-658618:-1
so has part: feature:658427-658618:-1:exon

position:658427:-1
position: 658427
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:658618:-1
position: 658618
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:658427-658618:-1:exon

LOC116660432
type: Exon
subclass of: SO_0000147
RO_0002162: 419612
gene: LOC116660432
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 48% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC116660432
subclass of: SO_0000673
so part of: LOC116660432
location: complement(660190..660344)
location: region:660190-660344:-1
so has part: feature:660190-660344:-1:exon

position:660190:-1
position: 660190
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:660344:-1
position: 660344
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:660190-660344:-1:exon

LOC116660432
type: Exon
subclass of: SO_0000147
RO_0002162: 419612
gene: LOC116660432
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 48% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC116660432
subclass of: SO_0000673
so part of: LOC116660432
location: complement(661338..661531)
location: region:661338-661531:-1
so has part: feature:661338-661531:-1:exon

position:661338:-1
position: 661338
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:661531:-1
position: 661531
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:661338-661531:-1:exon

LOC116660432
type: Exon
subclass of: SO_0000147
RO_0002162: 419612
gene: LOC116660432
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 48% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC116660432
subclass of: SO_0000673
so part of: LOC116660432
location: complement(663292..663373)
location: region:663292-663373:-1
so has part: feature:663292-663373:-1:exon

position:663292:-1
position: 663292
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:663373:-1
position: 663373
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:663292-663373:-1:exon

LOC116660432
type: Exon
subclass of: SO_0000147
RO_0002162: 419612
gene: LOC116660432
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 48% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC116660432
subclass of: SO_0000673
so part of: LOC116660432
location: complement(672877..673048)
location: region:672877-673048:-1
so has part: feature:672877-673048:-1:exon

position:672877:-1
position: 672877
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:673048:-1
position: 673048
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:672877-673048:-1:exon

LOC116660432
type: Exon
subclass of: SO_0000147
RO_0002162: 419612
gene: LOC116660432
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 48% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC116660432
subclass of: SO_0000673
so part of: LOC116660432
location: complement(673169..674137)
location: region:673169-674137:-1
so has part: feature:673169-674137:-1:exon

position:673169:-1
position: 673169
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:673169-674137:-1:exon

LOC116660495
type: Gene
subclass of: SO_0000704
RO_0002162: 419612
gene: LOC116660495
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 678144..685891
location: region:678144-685891:1
so has part: feature:678144-685891:1:exon
subclass of: SO_0000011

116660495
type: Gene
SIO_000068: ncbigene

position:678144:1
position: 678144
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:685891:1
position: 685891
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:678144-685891:1:exon

LOC116660495
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 419612
nc RNA class: lncRNA
gene: LOC116660495
product: uncharacterized LOC116660495
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XR_004316045.1
SIO_010081: LOC116660495
subclass of: SO_0000673
so part of: LOC116660495
location: join(678144..678443,680248..680414,681095..681244,685875..685891)
location: region:678144-685891:1
so has part: feature:678144-678443:1:exon
so has part: feature:680248-680414:1:exon
so has part: feature:681095-681244:1:exon
so has part: feature:685875-685891:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:678144-678443:1:exon

position:678443:1
position: 678443
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:680248-680414:1:exon

position:680248:1
position: 680248
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:680414:1
position: 680414
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:681095-681244:1:exon

position:681095:1
position: 681095
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:681244:1
position: 681244
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:685875-685891:1:exon

position:685875:1
position: 685875
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC116660497
type: Gene
subclass of: SO_0000704
RO_0002162: 419612
gene: LOC116660497
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(680289..696553)
location: region:680289-696553:-1
so has part: feature:680289-696553:-1:exon
subclass of: SO_0000011

116660497
type: Gene
SIO_000068: ncbigene

position:680289:-1
position: 680289
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:696553:-1
position: 696553
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:680289-696553:-1:exon

LOC116660497
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 419612
nc RNA class: lncRNA
gene: LOC116660497
product: uncharacterized LOC116660497
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XR_004316047.1
SIO_010081: LOC116660497
subclass of: SO_0000673
so part of: LOC116660497
location: complement(join(680289..680383,693730..694363,696104..696553))
location: region:680289-696553:-1
so has part: feature:696104-696553:-1:exon
so has part: feature:693730-694363:-1:exon
so has part: feature:680289-680383:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:696104-696553:-1:exon

position:696104:-1
position: 696104
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:693730-694363:-1:exon

position:693730:-1
position: 693730
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:694363:-1
position: 694363
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:680289-680383:-1:exon

position:680383:-1
position: 680383
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC116660496
type: Gene
subclass of: SO_0000704
RO_0002162: 419612
gene: LOC116660496
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 685958..692579
location: region:685958-692579:1
so has part: feature:685958-692579:1:exon
subclass of: SO_0000011

116660496
type: Gene
SIO_000068: ncbigene

position:685958:1
position: 685958
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:692579:1
position: 692579
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:685958-692579:1:exon

LOC116660496
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 419612
nc RNA class: lncRNA
gene: LOC116660496
product: uncharacterized LOC116660496
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XR_004316046.1
SIO_010081: LOC116660496
subclass of: SO_0000673
so part of: LOC116660496
location: join(685958..686063,688052..688233,689952..690156,692494..692579)
location: region:685958-692579:1
so has part: feature:685958-686063:1:exon
so has part: feature:688052-688233:1:exon
so has part: feature:689952-690156:1:exon
so has part: feature:692494-692579:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:685958-686063:1:exon

position:686063:1
position: 686063
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:688052-688233:1:exon

position:688052:1
position: 688052
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:688233:1
position: 688233
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:689952-690156:1:exon

position:689952:1
position: 689952
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:690156:1
position: 690156
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:692494-692579:1:exon

position:692494:1
position: 692494
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC116660433
type: Gene
subclass of: SO_0000704
RO_0002162: 419612
gene: LOC116660433
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 701178..745676
location: region:701178-745676:1
so has part: feature:701178-745676:1:exon
subclass of: SO_0000010

116660433
type: Gene
SIO_000068: ncbigene

position:701178:1
position: 701178
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:745676:1
position: 745676
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:701178-745676:1:exon

LOC116660433
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 419612
gene: LOC116660433
product: guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-4-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 82% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_032469907.1
SIO_010081: LOC116660433
subclass of: SO_0000673
so part of: LOC116660433
location: join(701178..701721,722855..722961,726666..726774,743136..743330,745620..745676)
location: region:701178-745676:1
so has part: feature:701178-701721:1:exon
so has part: feature:722855-722961:1:exon
so has part: feature:726666-726774:1:exon
so has part: feature:743136-743330:1:exon
so has part: feature:745620-745676:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:701178-701721:1:exon

position:701721:1
position: 701721
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:722855-722961:1:exon

position:722855:1
position: 722855
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:722961:1
position: 722961
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:726666-726774:1:exon

position:726666:1
position: 726666
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:726774:1
position: 726774
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:743136-743330:1:exon

position:743136:1
position: 743136
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:743330:1
position: 743330
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:745620-745676:1:exon

position:745620:1
position: 745620
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC116660433
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 419612
gene: LOC116660433
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-4-like
translation: MKEGMSSNSTTSISQARKAVEQLKMEACMDRVKVSQAADLLAYCEAHVWEDPLIIPVPASENHPLTPSVNKSIFVVSLAEAAHALCCREAAHLPLQDQHECPVTQGKLLGLPYLGL
SIO_010081: LOC116660433
subclass of: SO_0000673
so part of: LOC116660433
location: join(726676..726774,743136..743330,745620..745676)
location: region:726676-745676:1
so has part: feature:726676-726774:1:exon
so has part: feature:743136-743330:1:exon
so has part: feature:745620-745676:1:exon

XP_032325798.1
type: Protein
SIO_000068: ncbiprotein

position:726676:1
position: 726676
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:726676-726774:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:743136-743330:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:745620-745676:1:exon

LOC102522922
type: Gene
subclass of: SO_0000704
RO_0002162: 419612
gene: LOC102522922
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 761440..808633
location: region:761440-808633:1
so has part: feature:761440-808633:1:exon
subclass of: SO_0000010

102522922
type: Gene
SIO_000068: ncbigene

position:761440:1
position: 761440
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:808633:1
position: 808633
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:761440-808633:1:exon

LOC102522922
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 419612
gene: LOC102522922
product: UDP-GalNAc:beta-1, 3-N-acetylgalactosaminyltransferase 2
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 3 bases in 2 codons; deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 83% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_032470086.1
SIO_010081: LOC102522922
subclass of: SO_0000673
so part of: LOC102522922
location: join(761440..761800,771458..771605,778168..778268,782138..782331,786872..786965,797755..797864,800152..800234,803403..803563,804409..804410,805172..805297,805878..806041,806631..806680,808291..808633)
location: region:761440-808633:1
so has part: feature:761440-761800:1:exon
so has part: feature:771458-771605:1:exon
so has part: feature:778168-778268:1:exon
so has part: feature:782138-782331:1:exon
so has part: feature:786872-786965:1:exon
so has part: feature:797755-797864:1:exon
so has part: feature:800152-800234:1:exon
so has part: feature:803403-803563:1:exon
so has part: feature:804409-804410:1:exon
so has part: feature:805172-805297:1:exon
so has part: feature:805878-806041:1:exon
so has part: feature:806631-806680:1:exon
so has part: feature:808291-808633:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:761440-761800:1:exon

position:761800:1
position: 761800
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:771458-771605:1:exon

position:771458:1
position: 771458
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:771605:1
position: 771605
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:778168-778268:1:exon

position:778168:1
position: 778168
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:778268:1
position: 778268
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:782138-782331:1:exon

position:782138:1
position: 782138
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:782331:1
position: 782331
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:786872-786965:1:exon

position:786872:1
position: 786872
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:786965:1
position: 786965
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:797755-797864:1:exon

position:797755:1
position: 797755
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:797864:1
position: 797864
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:800152-800234:1:exon

position:800152:1
position: 800152
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:800234:1
position: 800234
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:803403-803563:1:exon

position:803403:1
position: 803403
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:803563:1
position: 803563
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:804409-804410:1:exon

position:804409:1
position: 804409
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:804410:1
position: 804410
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:805172-805297:1:exon

position:805172:1
position: 805172
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:805297:1
position: 805297
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:805878-806041:1:exon

position:805878:1
position: 805878
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:806041:1
position: 806041
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:806631-806680:1:exon

position:806631:1
position: 806631
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:806680:1
position: 806680
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:808291-808633:1:exon

position:808291:1
position: 808291
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC102522922
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 419612
gene: LOC102522922
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 3 bases in 2 codons; deleted 1 base in 1 codon; substituted 2 bases at 2 genomic stop codons; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
transl except: (pos:800180..800182,aa:OTHER)
transl except: (pos:805897..805899,aa:OTHER)
product: LOW QUALITY PROTEIN: UDP-GalNAc:beta-1,3-N-acetylgalactosaminyltransferase 2
translation: MRNWLVLMCPRVLGAALHLWLRLRSPQPARASGAGPADQLTLLPQWKSSHYDVVVGVLSAHNNHELRNIIRSTWLKHSLQHPALSQHVLVKFVMGARGCQVPVEDREDPYPCRLLNITNPVLNQEIEAFSLSEDTSSGLSEDRVVSVSFHVLYPIVITSLGVFYDASDGGFQRNITVKLYQADQEEALFVARFSPPSCGVQVNKXWYKPVEQFILPESFEGTXVWDSQDLQGPVSRNLHRVAVNDGGGVLRVLTAGEGALPHEXFMEGVEGVAGDFIYTIQEGEALLKNLHSRPRRLLDHISNLLGRGRLHGDIVFVDIIDTYRNVPAKLLNFYQWTVETTNFDLLLKTDDDCYIDLEAVFNRIALKNLDGPNFWWGKLNWAVDXTGKWQELEYPSPVYPAFVCGSGYVISKDIIIHWLASNSGHLKTYLGKDMSMGIWMAAIGPKRYQDSLWLCEKTCEPGMLSSPQYSLWELAALWELKESGRDPCQCAAR
SIO_010081: LOC102522922
subclass of: SO_0000673
so part of: LOC102522922
location: join(761689..761800,771458..771605,778168..778268,782138..782331,786872..786965,797755..797864,800152..800234,803403..803563,804409..804410,805172..805297,805878..806041,806631..806680,808291..808425)
location: region:761689-808425:1
so has part: feature:761689-761800:1:exon
so has part: feature:771458-771605:1:exon
so has part: feature:778168-778268:1:exon
so has part: feature:782138-782331:1:exon
so has part: feature:786872-786965:1:exon
so has part: feature:797755-797864:1:exon
so has part: feature:800152-800234:1:exon
so has part: feature:803403-803563:1:exon
so has part: feature:804409-804410:1:exon
so has part: feature:805172-805297:1:exon
so has part: feature:805878-806041:1:exon
so has part: feature:806631-806680:1:exon
so has part: feature:808291-808425:1:exon

XP_032325977.1
type: Protein
SIO_000068: ncbiprotein

position:761689:1
position: 761689
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:808425:1
position: 808425
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:761689-761800:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:771458-771605:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:778168-778268:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:782138-782331:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:786872-786965:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:797755-797864:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:800152-800234:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:803403-803563:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:804409-804410:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:805172-805297:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:805878-806041:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:806631-806680:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:808291-808425:1:exon

LOC106729930
type: Gene
subclass of: SO_0000704
RO_0002162: 419612
gene: LOC106729930
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(809468..829286)
location: region:809468-829286:-1
so has part: feature:809468-829286:-1:exon
subclass of: SO_0000010

106729930
type: Gene
SIO_000068: ncbigene

position:809468:-1
position: 809468
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:829286:-1
position: 829286
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:809468-829286:-1:exon

LOC106729930
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 419612
gene: LOC106729930
product: tubulin-specific chaperone E-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_032470085.1
SIO_010081: LOC106729930
subclass of: SO_0000673
so part of: LOC106729930
location: complement(join(809468..809753,809853..810013,812657..812716,813124..814088,814514..814667,815063..815215,815533..815597,815686..815750,816253..816348,817505..817581,818675..818777,829256..829286))
location: region:809468-829286:-1
so has part: feature:829256-829286:-1:exon
so has part: feature:818675-818777:-1:exon
so has part: feature:817505-817581:-1:exon
so has part: feature:816253-816348:-1:exon
so has part: feature:815686-815750:-1:exon
so has part: feature:815533-815597:-1:exon
so has part: feature:815063-815215:-1:exon
so has part: feature:814514-814667:-1:exon
so has part: feature:813124-814088:-1:exon
so has part: feature:812657-812716:-1:exon
so has part: feature:809853-810013:-1:exon
so has part: feature:809468-809753:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:829256-829286:-1:exon

position:829256:-1
position: 829256
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:818675-818777:-1:exon

position:818675:-1
position: 818675
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:818777:-1
position: 818777
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:817505-817581:-1:exon

position:817505:-1
position: 817505
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:817581:-1
position: 817581
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:816253-816348:-1:exon

position:816253:-1
position: 816253
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:816348:-1
position: 816348
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:815686-815750:-1:exon

position:815686:-1
position: 815686
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:815750:-1
position: 815750
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:815533-815597:-1:exon

position:815533:-1
position: 815533
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:815597:-1
position: 815597
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:815063-815215:-1:exon

position:815063:-1
position: 815063
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:815215:-1
position: 815215
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:814514-814667:-1:exon

position:814514:-1
position: 814514
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:814667:-1
position: 814667
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:813124-814088:-1:exon

position:813124:-1
position: 813124
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:814088:-1
position: 814088
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:812657-812716:-1:exon

position:812657:-1
position: 812657
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:812716:-1
position: 812716
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:809853-810013:-1:exon

position:809853:-1
position: 809853
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:810013:-1
position: 810013
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:809468-809753:-1:exon

position:809753:-1
position: 809753
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC106729930
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 419612
gene: LOC106729930
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tubulin-specific chaperone E-like
translation: MFPSLQYLVLNDNQMSHWSVIRELDKLSSLHALSCTRNPLTEGGRDPQTTRQLIIARVGQLRTLNKCAVEPEERHGAELHYWKAFGTEWKAAGGHQDPDRHLPSADFLAPHPRYQLLCHSNFTVPESQVLSWRPCAQCPRLLSVPGGLAILF
SIO_010081: LOC106729930
subclass of: SO_0000673
so part of: LOC106729930
location: complement(join(813988..814088,814514..814667,815063..815215,815533..815583))
location: region:813988-815583:-1
so has part: feature:815533-815583:-1:exon
so has part: feature:815063-815215:-1:exon
so has part: feature:814514-814667:-1:exon
so has part: feature:813988-814088:-1:exon

XP_032325976.1
type: Protein
SIO_000068: ncbiprotein

position:813988:-1
position: 813988
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:815583:-1
position: 815583
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:815533-815583:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:815063-815215:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:814514-814667:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:813988-814088:-1:exon

LOC116660494
type: Gene
subclass of: SO_0000704
RO_0002162: 419612
gene: LOC116660494
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: 822188..824196
location: region:822188-824196:1
so has part: feature:822188-824196:1:exon

116660494
type: Gene
SIO_000068: ncbigene

position:822188:1
position: 822188
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:824196:1
position: 824196
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:822188-824196:1:exon

LOC116660494
type: Exon
subclass of: SO_0000147
RO_0002162: 419612
gene: LOC116660494
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC116660494
subclass of: SO_0000673
so part of: LOC116660494
location: 822188..824196
location: region:822188-824196:1
so has part: feature:822188-824196:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:822188-824196:1:exon

LOC106730815
type: Gene
subclass of: SO_0000704
RO_0002162: 419612
gene: LOC106730815
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(831995..854694)
location: region:831995-854694:-1
so has part: feature:831995-854694:-1:exon
subclass of: SO_0000011

106730815
type: Gene
SIO_000068: ncbigene

position:831995:-1
position: 831995
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:854694:-1
position: 854694
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:831995-854694:-1:exon

LOC106730815
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 419612
nc RNA class: lncRNA
gene: LOC106730815
product: uncharacterized LOC106730815
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XR_004316044.1
SIO_010081: LOC106730815
subclass of: SO_0000673
so part of: LOC106730815
location: complement(join(831995..833056,838674..838756,854247..854694))
location: region:831995-854694:-1
so has part: feature:854247-854694:-1:exon
so has part: feature:838674-838756:-1:exon
so has part: feature:831995-833056:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:854247-854694:-1:exon

position:854247:-1
position: 854247
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:838674-838756:-1:exon

position:838674:-1
position: 838674
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:838756:-1
position: 838756
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:831995-833056:-1:exon

position:833056:-1
position: 833056
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC102511068
type: Gene
subclass of: SO_0000704
RO_0002162: 419612
gene: LOC102511068
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: complement(879290..880073)
location: region:879290-880073:-1
so has part: feature:879290-880073:-1:exon

102511068
type: Gene
SIO_000068: ncbigene

position:879290:-1
position: 879290
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:880073:-1
position: 880073
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:879290-880073:-1:exon

LOC102511068
type: Exon
subclass of: SO_0000147
RO_0002162: 419612
gene: LOC102511068
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 85% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC102511068
subclass of: SO_0000673
so part of: LOC102511068
location: complement(879290..880073)
location: region:879290-880073:-1
so has part: feature:879290-880073:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:879290-880073:-1:exon

LOC116660456
type: Gene
subclass of: SO_0000704
RO_0002162: 419612
gene: LOC116660456
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(970286..971613)
location: region:970286-971613:-1
so has part: feature:970286-971613:-1:exon
subclass of: SO_0000010

116660456
type: Gene
SIO_000068: ncbigene

position:970286:-1
position: 970286
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:971613:-1
position: 971613
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:970286-971613:-1:exon

LOC116660456
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 419612
gene: LOC116660456
product: TLE family member 5-like
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_032470000.1
SIO_010081: LOC116660456
subclass of: SO_0000673
so part of: LOC116660456
location: complement(970286..971613)
location: region:970286-971613:-1
so has part: feature:970286-971613:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:970286-971613:-1:exon

LOC116660456
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 419612
gene: LOC116660456
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: TLE family member 5-like
translation: MMFRQSRHSGSLHLPQQLKFTPSDSCDRIKDEFQLMLAQYHSLKLERDKLASEKXEVQRHYVMCYDMSYGLNIEMHKQAVIVKRLNWICAQVLPYLSQEHQQQVLGAIERAKQVTAPELNSIIRQQLHPHQLSQLQALALPLTLLPVGLQPPSLLAVRAGTGLLSLSALGSQAHLSEDKNEHEGDTHQEDDGEKSD
SIO_010081: LOC116660456
subclass of: SO_0000673
so part of: LOC116660456
location: complement(970967..971556)
location: region:970967-971556:-1
so has part: feature:970967-971556:-1:exon

XP_032325891.1
type: Protein
SIO_000068: ncbiprotein

position:970967:-1
position: 970967
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:971556:-1
position: 971556
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:970967-971556:-1:exon

LOC102504428
type: Gene
subclass of: SO_0000704
RO_0002162: 419612
gene: LOC102504428
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: 1133488..1134227
location: region:1133488-1134227:1
so has part: feature:1133488-1134227:1:exon

102504428
type: Gene
SIO_000068: ncbigene

position:1133488:1
position: 1133488
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1134227:1
position: 1134227
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1133488-1134227:1:exon

LOC102504428
type: Exon
subclass of: SO_0000147
RO_0002162: 419612
gene: LOC102504428
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 45% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC102504428
subclass of: SO_0000673
so part of: LOC102504428
location: 1133488..1133502
location: region:1133488-1133502:1
so has part: feature:1133488-1133502:1:exon

position:1133502:1
position: 1133502
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1133488-1133502:1:exon

LOC102504428
type: Exon
subclass of: SO_0000147
RO_0002162: 419612
gene: LOC102504428
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 45% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC102504428
subclass of: SO_0000673
so part of: LOC102504428
location: 1133588..1134227
location: region:1133588-1134227:1
so has part: feature:1133588-1134227:1:exon

position:1133588:1
position: 1133588
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1133588-1134227:1:exon

LOC116660465
type: Gene
subclass of: SO_0000704
RO_0002162: 419612
gene: LOC116660465
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1159195..1180313
location: region:1159195-1180313:1
so has part: feature:1159195-1180313:1:exon
subclass of: SO_0000011

116660465
type: Gene
SIO_000068: ncbigene

position:1159195:1
position: 1159195
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1180313:1
position: 1180313
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1159195-1180313:1:exon

LOC116660465
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 419612
nc RNA class: lncRNA
gene: LOC116660465
product: uncharacterized LOC116660465
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XR_004315999.1
SIO_010081: LOC116660465
subclass of: SO_0000673
so part of: LOC116660465
location: join(1159195..1159393,1166518..1166521,1180302..1180313)
location: region:1159195-1180313:1
so has part: feature:1159195-1159393:1:exon
so has part: feature:1166518-1166521:1:exon
so has part: feature:1180302-1180313:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1159195-1159393:1:exon

position:1159393:1
position: 1159393
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1166518-1166521:1:exon

position:1166518:1
position: 1166518
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1166521:1
position: 1166521
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1180302-1180313:1:exon

position:1180302:1
position: 1180302
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC102504683
type: Gene
subclass of: SO_0000704
RO_0002162: 419612
gene: LOC102504683
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: complement(1214656..1215058)
location: region:1214656-1215058:-1
so has part: feature:1214656-1215058:-1:exon

102504683
type: Gene
SIO_000068: ncbigene

position:1214656:-1
position: 1214656
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1215058:-1
position: 1215058
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1214656-1215058:-1:exon

LOC102504683
type: Exon
subclass of: SO_0000147
RO_0002162: 419612
gene: LOC102504683
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 50% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC102504683
subclass of: SO_0000673
so part of: LOC102504683
location: complement(1214656..1215058)
location: region:1214656-1215058:-1
so has part: feature:1214656-1215058:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1214656-1215058:-1:exon

CALB1
type: Gene
subclass of: SO_0000704
RO_0002162: 419612
gene: CALB1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1305290..1328289
location: region:1305290-1328289:1
so has part: feature:1305290-1328289:1:exon
subclass of: SO_0000010

102506067
type: Gene
SIO_000068: ncbigene

position:1305290:1
position: 1305290
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1328289:1
position: 1328289
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1305290-1328289:1:exon

CALB1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 419612
gene: CALB1
product: calbindin 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 mRNAs, 15 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 20 samples with support for all annotated introns
transcript id: XM_006188550.3
SIO_010081: CALB1
subclass of: SO_0000673
so part of: CALB1
location: join(1305290..1305610,1306138..1306214,1310016..1310090,1317440..1317523,1317639..1317695,1320801..1320878,1323331..1323386,1323470..1323509,1323613..1323666,1326241..1326312,1326649..1328289)
location: region:1305290-1328289:1
so has part: feature:1305290-1305610:1:exon
so has part: feature:1306138-1306214:1:exon
so has part: feature:1310016-1310090:1:exon
so has part: feature:1317440-1317523:1:exon
so has part: feature:1317639-1317695:1:exon
so has part: feature:1320801-1320878:1:exon
so has part: feature:1323331-1323386:1:exon
so has part: feature:1323470-1323509:1:exon
so has part: feature:1323613-1323666:1:exon
so has part: feature:1326241-1326312:1:exon
so has part: feature:1326649-1328289:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1305290-1305610:1:exon

position:1305610:1
position: 1305610
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1306138-1306214:1:exon

position:1306138:1
position: 1306138
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1306214:1
position: 1306214
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1310016-1310090:1:exon

position:1310016:1
position: 1310016
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1310090:1
position: 1310090
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1317440-1317523:1:exon

position:1317440:1
position: 1317440
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1317523:1
position: 1317523
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1317639-1317695:1:exon

position:1317639:1
position: 1317639
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1317695:1
position: 1317695
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1320801-1320878:1:exon

position:1320801:1
position: 1320801
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1320878:1
position: 1320878
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1323331-1323386:1:exon

position:1323331:1
position: 1323331
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1323386:1
position: 1323386
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1323470-1323509:1:exon

position:1323470:1
position: 1323470
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1323509:1
position: 1323509
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1323613-1323666:1:exon

position:1323613:1
position: 1323613
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1323666:1
position: 1323666
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1326241-1326312:1:exon

position:1326241:1
position: 1326241
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1326312:1
position: 1326312
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1326649-1328289:1:exon

position:1326649:1
position: 1326649
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

CALB1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 419612
gene: CALB1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: calbindin
translation: MAESHLQSSLISASQFFEIWLHFDADGSGYLEGKELQNLIQELQQARKKAGLELSPEMKTFVDQYGQRDDGKIGIVELAHVLPTEENFLLLFRCQQLKSCEEFMKTWRRYDTDHSGFIETEELKNFLKDLLEKANKTVDDTKLAEYTDLMLKLFDSNNDGKLELTEMARLLPVQENFLLKFQGVKMCGKEFNKAFELYDQDGNGYIDENELDALLKDLCEKNKQDLDINNIPTYKKSIMALSDGGKLYRTDLALILSAGDN
SIO_010081: CALB1
subclass of: SO_0000673
so part of: CALB1
location: join(1305532..1305610,1306138..1306214,1310016..1310090,1317440..1317523,1317639..1317695,1320801..1320878,1323331..1323386,1323470..1323509,1323613..1323666,1326241..1326312,1326649..1326762)
location: region:1305532-1326762:1
so has part: feature:1305532-1305610:1:exon
so has part: feature:1306138-1306214:1:exon
so has part: feature:1310016-1310090:1:exon
so has part: feature:1317440-1317523:1:exon
so has part: feature:1317639-1317695:1:exon
so has part: feature:1320801-1320878:1:exon
so has part: feature:1323331-1323386:1:exon
so has part: feature:1323470-1323509:1:exon
so has part: feature:1323613-1323666:1:exon
so has part: feature:1326241-1326312:1:exon
so has part: feature:1326649-1326762:1:exon

XP_006188612.1
type: Protein
SIO_000068: ncbiprotein

position:1305532:1
position: 1305532
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1326762:1
position: 1326762
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1305532-1305610:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1306138-1306214:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1310016-1310090:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1317440-1317523:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1317639-1317695:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1320801-1320878:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1323331-1323386:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1323470-1323509:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1323613-1323666:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1326241-1326312:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1326649-1326762:1:exon

DECR1
type: Gene
subclass of: SO_0000704
RO_0002162: 419612
gene: DECR1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1330970..1362708)
location: region:1330970-1362708:-1
so has part: feature:1330970-1362708:-1:exon
subclass of: SO_0000010

102506320
type: Gene
SIO_000068: ncbigene

position:1330970:-1
position: 1330970
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1362708:-1
position: 1362708
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1330970-1362708:-1:exon

DECR1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 419612
gene: DECR1
product: 2,4-dienoyl-CoA reductase 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 41 samples with support for all annotated introns
transcript id: XM_032470237.1
SIO_010081: DECR1
subclass of: SO_0000673
so part of: DECR1
location: complement(join(1330970..1331589,1331686..1331748,1332435..1332581,1334624..1334696,1338660..1338735,1352239..1352386,1353925..1354011,1354134..1354191,1355382..1355581,1362529..1362708))
location: region:1330970-1362708:-1
so has part: feature:1362529-1362708:-1:exon
so has part: feature:1355382-1355581:-1:exon
so has part: feature:1354134-1354191:-1:exon
so has part: feature:1353925-1354011:-1:exon
so has part: feature:1352239-1352386:-1:exon
so has part: feature:1338660-1338735:-1:exon
so has part: feature:1334624-1334696:-1:exon
so has part: feature:1332435-1332581:-1:exon
so has part: feature:1331686-1331748:-1:exon
so has part: feature:1330970-1331589:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1362529-1362708:-1:exon

position:1362529:-1
position: 1362529
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1355382-1355581:-1:exon

position:1355382:-1
position: 1355382
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1355581:-1
position: 1355581
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1354134-1354191:-1:exon

position:1354134:-1
position: 1354134
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1354191:-1
position: 1354191
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1353925-1354011:-1:exon

position:1353925:-1
position: 1353925
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1354011:-1
position: 1354011
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1352239-1352386:-1:exon

position:1352239:-1
position: 1352239
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1352386:-1
position: 1352386
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1338660-1338735:-1:exon

position:1338660:-1
position: 1338660
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1338735:-1
position: 1338735
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1334624-1334696:-1:exon

position:1334624:-1
position: 1334624
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1334696:-1
position: 1334696
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1332435-1332581:-1:exon

position:1332435:-1
position: 1332435
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1332581:-1
position: 1332581
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1331686-1331748:-1:exon

position:1331686:-1
position: 1331686
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1331748:-1
position: 1331748
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1330970-1331589:-1:exon

position:1331589:-1
position: 1331589
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

DECR1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 419612
gene: DECR1
product: 2,4-dienoyl-CoA reductase 1, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 36 samples with support for all annotated introns
transcript id: XM_032470238.1
SIO_010081: DECR1
subclass of: SO_0000673
so part of: DECR1
location: complement(join(1330970..1331589,1332435..1332581,1334624..1334696,1338660..1338759,1352239..1352386,1353925..1354011,1354134..1354191,1355382..1355581,1362529..1362708))
location: region:1330970-1362708:-1
so has part: feature:1362529-1362708:-1:exon
so has part: feature:1355382-1355581:-1:exon
so has part: feature:1354134-1354191:-1:exon
so has part: feature:1353925-1354011:-1:exon
so has part: feature:1352239-1352386:-1:exon
so has part: feature:1338660-1338759:-1:exon
so has part: feature:1334624-1334696:-1:exon
so has part: feature:1332435-1332581:-1:exon
so has part: feature:1330970-1331589:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1362529-1362708:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1355382-1355581:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1354134-1354191:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1353925-1354011:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1352239-1352386:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1338660-1338759:-1:exon

position:1338759:-1
position: 1338759
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1334624-1334696:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1332435-1332581:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1330970-1331589:-1:exon

DECR1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 419612
gene: DECR1
product: 2,4-dienoyl-CoA reductase 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 43 samples with support for all annotated introns
transcript id: XM_006188551.3
SIO_010081: DECR1
subclass of: SO_0000673
so part of: DECR1
location: complement(join(1330970..1331589,1331686..1331748,1332435..1332581,1334624..1334696,1338660..1338759,1352239..1352386,1353925..1354011,1354134..1354191,1355382..1355581,1362529..1362708))
location: region:1330970-1362708:-1
so has part: feature:1362529-1362708:-1:exon
so has part: feature:1355382-1355581:-1:exon
so has part: feature:1354134-1354191:-1:exon
so has part: feature:1353925-1354011:-1:exon
so has part: feature:1352239-1352386:-1:exon
so has part: feature:1338660-1338759:-1:exon
so has part: feature:1334624-1334696:-1:exon
so has part: feature:1332435-1332581:-1:exon
so has part: feature:1331686-1331748:-1:exon
so has part: feature:1330970-1331589:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1362529-1362708:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1355382-1355581:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1354134-1354191:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1353925-1354011:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1352239-1352386:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1338660-1338759:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1334624-1334696:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1332435-1332581:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1331686-1331748:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1330970-1331589:-1:exon

DECR1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 419612
gene: DECR1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: 2,4-dienoyl-CoA reductase, mitochondrial isoform X2
translation: MVSAARARPLQSTPRPLPSRPTHSAEPFRFRATFVKLNMSLLGRVFFAPGRGPRRFFSYGTQIYQTTDAFQSKFFPPVQNVMLPPNSFQGKVAFITGGGTGLGKGMTTHLSSLGAQCVIASRKIDVLKATAEQISSQTGNKVHAIQCDVRDLDMVKNTVSELIKVAGHPDIVINNAAGNFISPTERLSPNAWKTITDIVLNGTAYVTLEIGKQLIKAQKAIYADTGSGFVVPSASAKAGVETMSKSLAAEWGKYGMRFNMIQPGPIKTKGAFSRMDPAGAFEKEMIERIPCGRLGTVGELANLAVFLCSDYASWINGAVIRFDGGEKALISGEFNSLRKVTKEQWDTIEGLIRKTKGS
SIO_010081: DECR1
subclass of: SO_0000673
so part of: DECR1
location: complement(join(1331530..1331589,1331686..1331748,1332435..1332581,1334624..1334696,1338660..1338735,1352239..1352386,1353925..1354011,1354134..1354191,1355382..1355581,1362529..1362693))
location: region:1331530-1362693:-1
so has part: feature:1362529-1362693:-1:exon
so has part: feature:1355382-1355581:-1:exon
so has part: feature:1354134-1354191:-1:exon
so has part: feature:1353925-1354011:-1:exon
so has part: feature:1352239-1352386:-1:exon
so has part: feature:1338660-1338735:-1:exon
so has part: feature:1334624-1334696:-1:exon
so has part: feature:1332435-1332581:-1:exon
so has part: feature:1331686-1331748:-1:exon
so has part: feature:1331530-1331589:-1:exon

XP_032326128.1
type: Protein
SIO_000068: ncbiprotein

position:1331530:-1
position: 1331530
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1362693:-1
position: 1362693
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1362529-1362693:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1355382-1355581:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1354134-1354191:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1353925-1354011:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1352239-1352386:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1338660-1338735:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1334624-1334696:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1332435-1332581:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1331686-1331748:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1331530-1331589:-1:exon

DECR1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 419612
gene: DECR1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: 2,4-dienoyl-CoA reductase, mitochondrial isoform X3
translation: MVSAARARPLQSTPRPLPSRPTHSAEPFRFRATFVKLNMSLLGRVFFAPGRGPRRFFSYGTQIYQTTDAFQSKFFPPVQNVMLPPNSFQGKVAFITGGGTGLGKGMTTHLSSLGAQCVIASRKIDVLKATAEQISSQTGNKVHAIQCDVRDLDMVKNTVSELIKVAGHPDIVINNAAGNFISPTERLSPNAWKTITDIVLNGTAYVTLEIGKQLIKAQKGATFLAITAIYADTGSGFVVPSASAKAGVETMSKSLAAEWGKYGMRFNMIQPGPIKTKGAFSRMDPAGAFEKEMIERIPCGRLGTVGELANLAVFLCSDYASWINGAVTKEQWDTIEGLIRKTKGS
SIO_010081: DECR1
subclass of: SO_0000673
so part of: DECR1
location: complement(join(1331530..1331589,1332435..1332581,1334624..1334696,1338660..1338759,1352239..1352386,1353925..1354011,1354134..1354191,1355382..1355581,1362529..1362693))
location: region:1331530-1362693:-1
so has part: feature:1362529-1362693:-1:exon
so has part: feature:1355382-1355581:-1:exon
so has part: feature:1354134-1354191:-1:exon
so has part: feature:1353925-1354011:-1:exon
so has part: feature:1352239-1352386:-1:exon
so has part: feature:1338660-1338759:-1:exon
so has part: feature:1334624-1334696:-1:exon
so has part: feature:1332435-1332581:-1:exon
so has part: feature:1331530-1331589:-1:exon

XP_032326129.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1362529-1362693:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1355382-1355581:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1354134-1354191:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1353925-1354011:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1352239-1352386:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1338660-1338759:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1334624-1334696:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1332435-1332581:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1331530-1331589:-1:exon

DECR1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 419612
gene: DECR1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: 2,4-dienoyl-CoA reductase, mitochondrial isoform X1
translation: MVSAARARPLQSTPRPLPSRPTHSAEPFRFRATFVKLNMSLLGRVFFAPGRGPRRFFSYGTQIYQTTDAFQSKFFPPVQNVMLPPNSFQGKVAFITGGGTGLGKGMTTHLSSLGAQCVIASRKIDVLKATAEQISSQTGNKVHAIQCDVRDLDMVKNTVSELIKVAGHPDIVINNAAGNFISPTERLSPNAWKTITDIVLNGTAYVTLEIGKQLIKAQKGATFLAITAIYADTGSGFVVPSASAKAGVETMSKSLAAEWGKYGMRFNMIQPGPIKTKGAFSRMDPAGAFEKEMIERIPCGRLGTVGELANLAVFLCSDYASWINGAVIRFDGGEKALISGEFNSLRKVTKEQWDTIEGLIRKTKGS
SIO_010081: DECR1
subclass of: SO_0000673
so part of: DECR1
location: complement(join(1331530..1331589,1331686..1331748,1332435..1332581,1334624..1334696,1338660..1338759,1352239..1352386,1353925..1354011,1354134..1354191,1355382..1355581,1362529..1362693))
location: region:1331530-1362693:-1
so has part: feature:1362529-1362693:-1:exon
so has part: feature:1355382-1355581:-1:exon
so has part: feature:1354134-1354191:-1:exon
so has part: feature:1353925-1354011:-1:exon
so has part: feature:1352239-1352386:-1:exon
so has part: feature:1338660-1338759:-1:exon
so has part: feature:1334624-1334696:-1:exon
so has part: feature:1332435-1332581:-1:exon
so has part: feature:1331686-1331748:-1:exon
so has part: feature:1331530-1331589:-1:exon

XP_006188613.2
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1362529-1362693:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1355382-1355581:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1354134-1354191:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1353925-1354011:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1352239-1352386:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1338660-1338759:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1334624-1334696:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1332435-1332581:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1331686-1331748:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1331530-1331589:-1:exon

NBN
type: Gene
subclass of: SO_0000704
RO_0002162: 419612
gene: NBN
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1377225..1432526
location: region:1377225-1432526:1
so has part: feature:1377225-1432526:1:exon
subclass of: SO_0000010

102506568
type: Gene
SIO_000068: ncbigene

position:1377225:1
position: 1377225
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1432526:1
position: 1432526
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1377225-1432526:1:exon

NBN
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 419612
gene: NBN
product: nibrin
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 97% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_032470295.1
SIO_010081: NBN
subclass of: SO_0000673
so part of: NBN
location: join(1377225..1377354,1379301..1379431,1380547..1380696,1381156..1381315,1383696..1383799,1400762..1400879,1401477..1401670,1403052..1403054,1407115..1407209,1412342..1412471,1414089..1414364,1416095..1416539,1421537..1421605,1422879..1423034,1425511..1425624,1431026..1431075,1432348..1432526)
location: region:1377225-1432526:1
so has part: feature:1377225-1377354:1:exon
so has part: feature:1379301-1379431:1:exon
so has part: feature:1380547-1380696:1:exon
so has part: feature:1381156-1381315:1:exon
so has part: feature:1383696-1383799:1:exon
so has part: feature:1400762-1400879:1:exon
so has part: feature:1401477-1401670:1:exon
so has part: feature:1403052-1403054:1:exon
so has part: feature:1407115-1407209:1:exon
so has part: feature:1412342-1412471:1:exon
so has part: feature:1414089-1414364:1:exon
so has part: feature:1416095-1416539:1:exon
so has part: feature:1421537-1421605:1:exon
so has part: feature:1422879-1423034:1:exon
so has part: feature:1425511-1425624:1:exon
so has part: feature:1431026-1431075:1:exon
so has part: feature:1432348-1432526:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1377225-1377354:1:exon

position:1377354:1
position: 1377354
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1379301-1379431:1:exon

position:1379301:1
position: 1379301
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1379431:1
position: 1379431
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1380547-1380696:1:exon

position:1380547:1
position: 1380547
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1380696:1
position: 1380696
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1381156-1381315:1:exon

position:1381156:1
position: 1381156
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1381315:1
position: 1381315
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1383696-1383799:1:exon

position:1383696:1
position: 1383696
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1383799:1
position: 1383799
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1400762-1400879:1:exon

position:1400762:1
position: 1400762
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1400879:1
position: 1400879
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1401477-1401670:1:exon

position:1401477:1
position: 1401477
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1401670:1
position: 1401670
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1403052-1403054:1:exon

position:1403052:1
position: 1403052
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1403054:1
position: 1403054
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1407115-1407209:1:exon

position:1407115:1
position: 1407115
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1407209:1
position: 1407209
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1412342-1412471:1:exon

position:1412342:1
position: 1412342
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1412471:1
position: 1412471
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1414089-1414364:1:exon

position:1414089:1
position: 1414089
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1414364:1
position: 1414364
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1416095-1416539:1:exon

position:1416095:1
position: 1416095
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1416539:1
position: 1416539
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1421537-1421605:1:exon

position:1421537:1
position: 1421537
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1421605:1
position: 1421605
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:1422879-1423034:1:exon

position:1422879:1
position: 1422879
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1423034:1
position: 1423034
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:1425511-1425624:1:exon

position:1425511:1
position: 1425511
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1425624:1
position: 1425624
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:1431026-1431075:1:exon

position:1431026:1
position: 1431026
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1431075:1
position: 1431075
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:1432348-1432526:1:exon

position:1432348:1
position: 1432348
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

NBN
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 419612
gene: NBN
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: nibrin
translation: MWKLLPATGPAREPYRLLTGVEYIVGRKNCGILIEDDQSISRNHAVLTANFPVTNLSQADEIPILTIKDNSKYGTFVNEEKVQNGLSRTLKTGDRITFGVFASKFRVEYEPLVACSSCLDVSGKTALSQAVLRLGGLTVNNWTEECTHLVMMSVKVTIKTICALICGRPIVKPEYFTEFLKAVQSKKQPPEIVSFYPPVDEPTIGSKNIDLSGRPERKQIFKGKTFVFLNAKQHKKLSTAVIFGGGDTRLITEENEEDDSFFSAPGTCVVDVGMTDSQMLIPNSQKKWIHSIMDRLQRRVLRPIPEAEIGLAVIFMSTENYCDPQGQPSTGLKTTTPGPSPSPGFSGNGNLTPGVPVNTTAYVADTESEQADTCMDLSEKPKEIKIFGLERKFRLPSQETSTVRDPPRVSATSKSTVSHTLVRTAVPNHQLSPAKLPGANKSGDRASQQPQTNSIKNYFKPSTQKRERDEENQEMSLSKSARIEMSCSLLEQTQPITPSMWTRKEQHLSRNEPVGKETDSSFADVDLKSTVKNSATKSLSTEELRSEKRKEIDDLAIEDEVLEELFKNIKPELEMEVKVQKQEEDVNIRKRPRLDLETNGTFNDEARPESNKISQENEIGKKCELKKESLWSTKELSNNEELKDDGEVLPRKVLLTEFRSLVVSNSASRNAASVSNDYGQLKNFKKFKKVSFPGARKLPHIIGGSDLIAHHARKNTELEEWLRQEMEVQNQHAKEESLADDLFRYNPNIKRRR
SIO_010081: NBN
subclass of: SO_0000673
so part of: NBN
location: join(1377318..1377354,1379301..1379431,1380547..1380696,1381156..1381315,1383696..1383799,1400762..1400879,1401477..1401670,1403052..1403054,1407115..1407209,1412342..1412471,1414089..1414364,1416095..1416539,1421537..1421605,1422879..1423034,1425511..1425624,1431026..1431075,1432348..1432378)
location: region:1377318-1432378:1
so has part: feature:1377318-1377354:1:exon
so has part: feature:1379301-1379431:1:exon
so has part: feature:1380547-1380696:1:exon
so has part: feature:1381156-1381315:1:exon
so has part: feature:1383696-1383799:1:exon
so has part: feature:1400762-1400879:1:exon
so has part: feature:1401477-1401670:1:exon
so has part: feature:1403052-1403054:1:exon
so has part: feature:1407115-1407209:1:exon
so has part: feature:1412342-1412471:1:exon
so has part: feature:1414089-1414364:1:exon
so has part: feature:1416095-1416539:1:exon
so has part: feature:1421537-1421605:1:exon
so has part: feature:1422879-1423034:1:exon
so has part: feature:1425511-1425624:1:exon
so has part: feature:1431026-1431075:1:exon
so has part: feature:1432348-1432378:1:exon

XP_032326186.1
type: Protein
SIO_000068: ncbiprotein

position:1377318:1
position: 1377318
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1432378:1
position: 1432378
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1377318-1377354:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1379301-1379431:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1380547-1380696:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1381156-1381315:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1383696-1383799:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1400762-1400879:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1401477-1401670:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1403052-1403054:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1407115-1407209:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1412342-1412471:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1414089-1414364:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1416095-1416539:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1421537-1421605:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1422879-1423034:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1425511-1425624:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1431026-1431075:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1432348-1432378:1:exon

OSGIN2
type: Gene
subclass of: SO_0000704
RO_0002162: 419612
gene: OSGIN2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1442965..1468721)
location: region:1442965-1468721:-1
so has part: feature:1442965-1468721:-1:exon
subclass of: SO_0000010

102506830
type: Gene
SIO_000068: ncbigene

position:1442965:-1
position: 1442965
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1468721:-1
position: 1468721
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1442965-1468721:-1:exon

OSGIN2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 419612
gene: OSGIN2
product: oxidative stress induced growth inhibitor family member 2
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments, including 37 samples with support for all annotated introns
transcript id: XM_032469892.1
SIO_010081: OSGIN2
subclass of: SO_0000673
so part of: OSGIN2
location: complement(join(1442965..1447579,1450863..1450954,1453812..1454003,1454527..1454663,1459953..1460107,1468678..1468721))
location: region:1442965-1468721:-1
so has part: feature:1468678-1468721:-1:exon
so has part: feature:1459953-1460107:-1:exon
so has part: feature:1454527-1454663:-1:exon
so has part: feature:1453812-1454003:-1:exon
so has part: feature:1450863-1450954:-1:exon
so has part: feature:1442965-1447579:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1468678-1468721:-1:exon

position:1468678:-1
position: 1468678
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1459953-1460107:-1:exon

position:1459953:-1
position: 1459953
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1460107:-1
position: 1460107
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1454527-1454663:-1:exon

position:1454527:-1
position: 1454527
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1454663:-1
position: 1454663
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1453812-1454003:-1:exon

position:1453812:-1
position: 1453812
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1454003:-1
position: 1454003
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1450863-1450954:-1:exon

position:1450863:-1
position: 1450863
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1450954:-1
position: 1450954
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1442965-1447579:-1:exon

position:1447579:-1
position: 1447579
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

OSGIN2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 419612
gene: OSGIN2
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: oxidative stress-induced growth inhibitor 2
translation: MPVWCCRCSLAAHFRNYSDTETEGEIFNSLVQYLGDNLGRKVTAMPLVEETSLLGDSSVTLPVVVIGNGPSGICLSYMLSGYRPYLSSEAIHPNAILHGKLEEARHLSIVDQDLEYLSEGLEGRSSNPVAVLFDTLLHPDADFGYDYPSVLHWKLEQHHYIPHLVLGKGPPGGAWHNMEGSMLTISFGNWMELPGLKFKDWVSSKRRNIKGDRVMPEEIAHYYKHYXKVMGLQKNFRENTYITSVSRLYRDQIDNDGQDRDISTQPLQIEKSKFIKRNWEIRGYQRAADGSPVPFCLFAENVALATGSLDSPGRLEIEGEDFPFVFHSMPEFGAAISKGKLRGKVDPVLIVGSGLTAADAVLCAYNNNVPVIHVFRRRVTDPSLIFKQLPKKLYPEYHKVYHMMCTQSYSLHSRLLPDYTSFPEHHVLSFKSDLKCILQSISGLKKIFKLSAAVVLIGSHPNLSFLKEQGCYLGHNSSQPITCKGNPVEIDAYTYECVKEANLFALGPLVGDNFVRFLKGGALGVTRCLATRQKKKQHLFVERGGGDGIA
SIO_010081: OSGIN2
subclass of: SO_0000673
so part of: OSGIN2
location: complement(join(1446548..1447579,1450863..1450954,1453812..1454003,1454527..1454663,1459953..1460107,1468678..1468721))
location: region:1446548-1468721:-1
so has part: feature:1468678-1468721:-1:exon
so has part: feature:1459953-1460107:-1:exon
so has part: feature:1454527-1454663:-1:exon
so has part: feature:1453812-1454003:-1:exon
so has part: feature:1450863-1450954:-1:exon
so has part: feature:1446548-1447579:-1:exon

XP_032325783.1
type: Protein
SIO_000068: ncbiprotein

position:1446548:-1
position: 1446548
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1468678-1468721:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1459953-1460107:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1454527-1454663:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1453812-1454003:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1450863-1450954:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1446548-1447579:-1:exon

TRNAA-GGC
type: Gene
subclass of: SO_0000704
RO_0002162: 419612
gene: TRNAA-GGC
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
so part of: sequence
location: 1482737..1482809
location: region:1482737-1482809:1
so has part: feature:1482737-1482809:1:exon
subclass of: SO_0000663

116660563
type: Gene
SIO_000068: ncbigene

position:1482737:1
position: 1482737
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1482809:1
position: 1482809
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1482737-1482809:1:exon

TRNAA-GGC
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 419612
gene: TRNAA-GGC
product: tRNA-Ala
inference: COORDINATES: profile:tRNAscan-SE:1.23
note: transfer RNA alanine (anticodon GGC); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:1482770..1482772,aa:Ala,seq:ggc)
SIO_010081: TRNAA-GGC
subclass of: SO_0000673
so part of: TRNAA-GGC
location: 1482737..1482809
location: region:1482737-1482809:1
so has part: feature:1482737-1482809:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1482737-1482809:1:exon

LOC116660476
type: Gene
subclass of: SO_0000704
RO_0002162: 419612
gene: LOC116660476
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1553719..1557731
location: region:1553719-1557731:1
so has part: feature:1553719-1557731:1:exon
subclass of: SO_0000010

116660476
type: Gene
SIO_000068: ncbigene

position:1553719:1
position: 1553719
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1557731:1
position: 1557731
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1553719-1557731:1:exon

LOC116660476
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 419612
gene: LOC116660476
product: rab11 family-interacting protein 4-like
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins, and 97% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_032470040.1
SIO_010081: LOC116660476
subclass of: SO_0000673
so part of: LOC116660476
location: 1553719..1557731
location: region:1553719-1557731:1
so has part: feature:1553719-1557731:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1553719-1557731:1:exon

LOC116660476
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 419612
gene: LOC116660476
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; deleted 1 base in 1 codon; substituted 1 base at 1 genomic stop codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
transl except: (pos:1556105..1556107,aa:OTHER)
product: LOW QUALITY PROTEIN: rab11 family-interacting protein 4-like
translation: MPSPASSRGSDWTVPAPFAPPAVSPSAPPTRARRLLSAAHRPAAGRGMRTPPASVGQGSEVPDPTSADGELLLRDPGFFPEDEDEAMTLAPPEGPQESDMDGPMESTQGLEGAVRIPAEEKDAGLGALFLPEDKSLVHTPSMTTSDLSTHSTTSLISNEEQFEDYGEADDVDCALSSPCPDDETRTNVYSDLGXSVSSSAGQTPRKMXHAYNSLLLDVYCSQCCENINLLNDLEARLKNLEANSPKRKISSTAFGRQLTHSSNFRSGNGSTEDLFRDSINSCDNDITEKVSFLEKKVTELKNDSPTNGDLKSKLKQENTQLVHRVHELEEMVKDQETKAEHALEEARRHREAYSWLERERGTEIELLNTRVKQLEEENTELRTTVTRLKSQTEKLDEERQRMSDRLEDTSLRLKDEMDLYKRVMDKLTQNRLEFQKEREATQELIEDLRKELEHLQMYKLDCERPGRGRGSSSGLGEFSARARELELEHEIKRLKQENHKLRDQNDDLNGQILSLSLYEAKNLFATQTKAQSLAAEIDTASRDELMEALKEQEEINFRLRQYMDKIILAILDHNPSILEIKH
SIO_010081: LOC116660476
subclass of: SO_0000673
so part of: LOC116660476
location: 1555526..1557274
location: region:1555526-1557274:1
so has part: feature:1555526-1557274:1:exon

XP_032325931.1
type: Protein
SIO_000068: ncbiprotein

position:1555526:1
position: 1555526
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1557274:1
position: 1557274
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1555526-1557274:1:exon

RIPK2
type: Gene
subclass of: SO_0000704
RO_0002162: 419612
gene: RIPK2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1562873..1590922)
location: region:1562873-1590922:-1
so has part: feature:1562873-1590922:-1:exon
subclass of: SO_0000010

102507090
type: Gene
SIO_000068: ncbigene

position:1562873:-1
position: 1562873
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1590922:-1
position: 1590922
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1562873-1590922:-1:exon

RIPK2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 419612
gene: RIPK2
product: receptor interacting serine/threonine kinase 2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 mRNAs, 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 38 samples with support for all annotated introns
transcript id: XM_032469853.1
SIO_010081: RIPK2
subclass of: SO_0000673
so part of: RIPK2
location: complement(join(1562873..1563923,1564507..1564662,1566352..1566445,1567698..1567787,1569477..1569562,1573755..1573916,1574738..1574787,1575511..1575668,1583030..1583185,1585479..1585632,1590573..1590922))
location: region:1562873-1590922:-1
so has part: feature:1590573-1590922:-1:exon
so has part: feature:1585479-1585632:-1:exon
so has part: feature:1583030-1583185:-1:exon
so has part: feature:1575511-1575668:-1:exon
so has part: feature:1574738-1574787:-1:exon
so has part: feature:1573755-1573916:-1:exon
so has part: feature:1569477-1569562:-1:exon
so has part: feature:1567698-1567787:-1:exon
so has part: feature:1566352-1566445:-1:exon
so has part: feature:1564507-1564662:-1:exon
so has part: feature:1562873-1563923:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1590573-1590922:-1:exon

position:1590573:-1
position: 1590573
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1585479-1585632:-1:exon

position:1585479:-1
position: 1585479
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1585632:-1
position: 1585632
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1583030-1583185:-1:exon

position:1583030:-1
position: 1583030
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1583185:-1
position: 1583185
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1575511-1575668:-1:exon

position:1575511:-1
position: 1575511
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1575668:-1
position: 1575668
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1574738-1574787:-1:exon

position:1574738:-1
position: 1574738
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1574787:-1
position: 1574787
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1573755-1573916:-1:exon

position:1573755:-1
position: 1573755
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1573916:-1
position: 1573916
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1569477-1569562:-1:exon

position:1569477:-1
position: 1569477
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1569562:-1
position: 1569562
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1567698-1567787:-1:exon

position:1567698:-1
position: 1567698
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1567787:-1
position: 1567787
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1566352-1566445:-1:exon

position:1566352:-1
position: 1566352
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1566445:-1
position: 1566445
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1564507-1564662:-1:exon

position:1564507:-1
position: 1564507
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1564662:-1
position: 1564662
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1562873-1563923:-1:exon

position:1563923:-1
position: 1563923
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

RIPK2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 419612
gene: RIPK2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: receptor-interacting serine/threonine-protein kinase 2
translation: MDHEAICSALPSIPYHKLADLRYLSRGASGTVSSARHADWRVQVAVKHLHIHTPLLDSERIDVLREAEILHKARFSYILPILGICNEPEFLGIVTEYMPNGSLNELLHRKNEYPDVPWPLRFRILHEIALGVNYLHNMNPPLLHHDLKTQNILLDNEFHVKIADFGLSKWRLMSLSQSQSSKSAPEGGTIIYMPPENYEPGQKSRASVKHDIYSYAVITWEVLSRKHPFEEVTNPLQIMYSVSQGHRPDTKEETLPCDIPHRALMVSLIESGWAQNPDERPSFLKCLIELEPVMRTFEEITFLEAVIQLKKTKLQSASSTIPLCDKKKMESSMNISVNHGPQEESCDSSQLRKTTGSPRTSGFLSAPQDNDFLPRKTQDFSVLRQCPVNHSWNSNISVAQRAACCDHKTAPCSLAIINPLSAEGNSERFQTGIAQQWIQSKREDIVSQMTEACLNQSLDALLSRDLIMKEDYELISTKPTRTSKVRQLLDTSDIQGEEFAKVIVQKLKDNKQMGLQPYPEILVVSQLSSLNLFQNKSL
SIO_010081: RIPK2
subclass of: SO_0000673
so part of: RIPK2
location: complement(join(1563586..1563923,1564507..1564662,1566352..1566445,1567698..1567787,1569477..1569562,1573755..1573916,1574738..1574787,1575511..1575668,1583030..1583185,1585479..1585632,1590573..1590745))
location: region:1563586-1590745:-1
so has part: feature:1590573-1590745:-1:exon
so has part: feature:1585479-1585632:-1:exon
so has part: feature:1583030-1583185:-1:exon
so has part: feature:1575511-1575668:-1:exon
so has part: feature:1574738-1574787:-1:exon
so has part: feature:1573755-1573916:-1:exon
so has part: feature:1569477-1569562:-1:exon
so has part: feature:1567698-1567787:-1:exon
so has part: feature:1566352-1566445:-1:exon
so has part: feature:1564507-1564662:-1:exon
so has part: feature:1563586-1563923:-1:exon

XP_032325744.1
type: Protein
SIO_000068: ncbiprotein

position:1563586:-1
position: 1563586
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1590745:-1
position: 1590745
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1590573-1590745:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1585479-1585632:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1583030-1583185:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1575511-1575668:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1574738-1574787:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1573755-1573916:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1569477-1569562:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1567698-1567787:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1566352-1566445:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1564507-1564662:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1563586-1563923:-1:exon

LOC106730113
type: Gene
subclass of: SO_0000704
RO_0002162: 419612
gene: LOC106730113
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: complement(1580967..1583015)
location: region:1580967-1583015:-1
so has part: feature:1580967-1583015:-1:exon

106730113
type: Gene
SIO_000068: ncbigene

position:1580967:-1
position: 1580967
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1583015:-1
position: 1583015
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1580967-1583015:-1:exon

LOC106730113
type: Exon
subclass of: SO_0000147
RO_0002162: 419612
gene: LOC106730113
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 95% coverage of the annotated genomic feature by RNAseq alignments, including 19 samples with support for all annotated introns
pseudo: true
SIO_010081: LOC106730113
subclass of: SO_0000673
so part of: LOC106730113
location: complement(1580967..1582585)
location: region:1580967-1582585:-1
so has part: feature:1580967-1582585:-1:exon

position:1582585:-1
position: 1582585
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1580967-1582585:-1:exon

LOC106730113
type: Exon
subclass of: SO_0000147
RO_0002162: 419612
gene: LOC106730113
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 95% coverage of the annotated genomic feature by RNAseq alignments, including 19 samples with support for all annotated introns
pseudo: true
SIO_010081: LOC106730113
subclass of: SO_0000673
so part of: LOC106730113
location: complement(1582663..1583015)
location: region:1582663-1583015:-1
so has part: feature:1582663-1583015:-1:exon

position:1582663:-1
position: 1582663
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1582663-1583015:-1:exon

LOC116660419
type: Gene
subclass of: SO_0000704
RO_0002162: 419612
gene: LOC116660419
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1596218..1603732)
location: region:1596218-1603732:-1
so has part: feature:1596218-1603732:-1:exon
subclass of: SO_0000011

116660419
type: Gene
SIO_000068: ncbigene

position:1596218:-1
position: 1596218
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1603732:-1
position: 1603732
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1596218-1603732:-1:exon

LOC116660419
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 419612
nc RNA class: lncRNA
gene: LOC116660419
product: uncharacterized LOC116660419
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XR_004315917.1
SIO_010081: LOC116660419
subclass of: SO_0000673
so part of: LOC116660419
location: complement(join(1596218..1596365,1601574..1601579,1603697..1603732))
location: region:1596218-1603732:-1
so has part: feature:1603697-1603732:-1:exon
so has part: feature:1601574-1601579:-1:exon
so has part: feature:1596218-1596365:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1603697-1603732:-1:exon

position:1603697:-1
position: 1603697
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1601574-1601579:-1:exon

position:1601574:-1
position: 1601574
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1601579:-1
position: 1601579
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1596218-1596365:-1:exon

position:1596365:-1
position: 1596365
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC102504944
type: Gene
subclass of: SO_0000704
RO_0002162: 419612
gene: LOC102504944
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: complement(1605356..1608499)
location: region:1605356-1608499:-1
so has part: feature:1605356-1608499:-1:exon

102504944
type: Gene
SIO_000068: ncbigene

position:1605356:-1
position: 1605356
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1608499:-1
position: 1608499
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1605356-1608499:-1:exon

LOC102504944
type: Exon
subclass of: SO_0000147
RO_0002162: 419612
gene: LOC102504944
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 Proteins, and 94% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC102504944
subclass of: SO_0000673
so part of: LOC102504944
location: complement(1605356..1608499)
location: region:1605356-1608499:-1
so has part: feature:1605356-1608499:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1605356-1608499:-1:exon

LOC102505209
type: Gene
subclass of: SO_0000704
RO_0002162: 419612
gene: LOC102505209
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: 1653651..1654659
location: region:1653651-1654659:1
so has part: feature:1653651-1654659:1:exon

102505209
type: Gene
SIO_000068: ncbigene

position:1653651:1
position: 1653651
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1654659:1
position: 1654659
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1653651-1654659:1:exon

LOC102505209
type: Exon
subclass of: SO_0000147
RO_0002162: 419612
gene: LOC102505209
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 88% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC102505209
subclass of: SO_0000673
so part of: LOC102505209
location: 1653651..1654659
location: region:1653651-1654659:1
so has part: feature:1653651-1654659:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1653651-1654659:1:exon

LOC102515617
type: Gene
subclass of: SO_0000704
RO_0002162: 419612
gene: LOC102515617
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1953880..1955478
location: region:1953880-1955478:1
so has part: feature:1953880-1955478:1:exon
subclass of: SO_0000010

102515617
type: Gene
SIO_000068: ncbigene

position:1953880:1
position: 1953880
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1955478:1
position: 1955478
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1953880-1955478:1:exon

LOC102515617
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 419612
gene: LOC102515617
product: brain-specific angiogenesis inhibitor 1-associated protein 2-like
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 2 bases in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 98% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_032469854.1
SIO_010081: LOC102515617
subclass of: SO_0000673
so part of: LOC102515617
location: 1953880..1955478
location: region:1953880-1955478:1
so has part: feature:1953880-1955478:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1953880-1955478:1:exon

LOC102515617
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 419612
gene: LOC102515617
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 2 bases in 1 codon; substituted 1 base at 1 genomic stop codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
transl except: (pos:1954852..1954854,aa:OTHER)
product: LOW QUALITY PROTEIN: brain-specific angiogenesis inhibitor 1-associated protein 2-like
translation: MSLSRSEEMHRLTENVYKTIMEQFNPSLRNFIAMGKNYKKALAGVMYAAKGYFDALVKMGELASESQGSKQLGDVLFQMAEVHRQIQNQLEEMLKSFHKELLTQLEQKVELDSRYLSTTLKKYQXRSKGDALDKCQAELKKLRKKSQGSKNSQNYSDKELQYIDAIGNKQGELESHVSDGYKTALTEERRRFCFLVEKQCAVAKNSAAYHSKGKELLAQKLPLWQQACTDPNKIPDRTVQLVQQVASSNGSILPSALSASKSNLVISGHIPGAKPLPVPPELAPFVGRLSAQDHAPVLNGVSGRDSEDYNPXADRKTAQSKTTCPPPTRQSQSKLSDSYSSTLPLRKSVAPKSSYAATENKTLPRSSSMAAGLVRNGRMQVKAIFSYVAGDNSTLLSFKESDLITPLVPEARDGWHYGESEKTKMWGWFPFSYTRVLDSDGGDRLHIQPAAGEEQQHWEPPGQGGPGHPAP
SIO_010081: LOC102515617
subclass of: SO_0000673
so part of: LOC102515617
location: 1953921..1955334
location: region:1953921-1955334:1
so has part: feature:1953921-1955334:1:exon

XP_032325745.1
type: Protein
SIO_000068: ncbiprotein

position:1953921:1
position: 1953921
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1955334:1
position: 1955334
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1953921-1955334:1:exon

LOC102515055
type: Gene
subclass of: SO_0000704
RO_0002162: 419612
gene: LOC102515055
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: 2049030..2128318
location: region:2049030-2128318:1
so has part: feature:2049030-2128318:1:exon

102515055
type: Gene
SIO_000068: ncbigene

position:2049030:1
position: 2049030
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2128318:1
position: 2128318
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2049030-2128318:1:exon

LOC102515055
type: Exon
subclass of: SO_0000147
RO_0002162: 419612
gene: LOC102515055
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 65% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC102515055
subclass of: SO_0000673
so part of: LOC102515055
location: 2049030..2049085
location: region:2049030-2049085:1
so has part: feature:2049030-2049085:1:exon

position:2049085:1
position: 2049085
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2049030-2049085:1:exon

LOC102515055
type: Exon
subclass of: SO_0000147
RO_0002162: 419612
gene: LOC102515055
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 65% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC102515055
subclass of: SO_0000673
so part of: LOC102515055
location: 2127462..2128318
location: region:2127462-2128318:1
so has part: feature:2127462-2128318:1:exon

position:2127462:1
position: 2127462
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2127462-2128318:1:exon

LOC102514785
type: Gene
subclass of: SO_0000704
RO_0002162: 419612
gene: LOC102514785
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: 2226676..2265146
location: region:2226676-2265146:1
so has part: feature:2226676-2265146:1:exon

102514785
type: Gene
SIO_000068: ncbigene

position:2226676:1
position: 2226676
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2265146:1
position: 2265146
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2226676-2265146:1:exon

LOC102514785
type: Exon
subclass of: SO_0000147
RO_0002162: 419612
gene: LOC102514785
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 64% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC102514785
subclass of: SO_0000673
so part of: LOC102514785
location: 2226676..2226745
location: region:2226676-2226745:1
so has part: feature:2226676-2226745:1:exon

position:2226745:1
position: 2226745
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2226676-2226745:1:exon

LOC102514785
type: Exon
subclass of: SO_0000147
RO_0002162: 419612
gene: LOC102514785
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 64% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC102514785
subclass of: SO_0000673
so part of: LOC102514785
location: 2264258..2265146
location: region:2264258-2265146:1
so has part: feature:2264258-2265146:1:exon

position:2264258:1
position: 2264258
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2264258-2265146:1:exon

LOC102514528
type: Gene
subclass of: SO_0000704
RO_0002162: 419612
gene: LOC102514528
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2296694..2297689
location: region:2296694-2297689:1
so has part: feature:2296694-2297689:1:exon
subclass of: SO_0000010

102514528
type: Gene
SIO_000068: ncbigene

position:2296694:1
position: 2296694
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2297689:1
position: 2297689
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2296694-2297689:1:exon

LOC102514528
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 419612
gene: LOC102514528
product: endonuclease G, mitochondrial
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 90% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_032469904.1
SIO_010081: LOC102514528
subclass of: SO_0000673
so part of: LOC102514528
location: 2296694..2297689
location: region:2296694-2297689:1
so has part: feature:2296694-2297689:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2296694-2297689:1:exon

LOC102514528
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 419612
gene: LOC102514528
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: substituted 1 base at 1 genomic stop codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
transl except: (pos:2296952..2296954,aa:OTHER)
product: LOW QUALITY PROTEIN: endonuclease G, mitochondrial
translation: MQALRASLTLALSAGLGAAAEGWRQRRRRRRRRAPEAPGLLSRLPVLPVAAAAELPAVSGALAGGSPGELAKYGLPGLAQIKSHESXYLLCYDPRPRGALWVVEQLRPERLRGDGDRCSCDFREDDSVHAYHRATNADYRDSGFDRGHLAAAANHRWSQKAMDDTFCLSNVALQVPHLNQNAWNNLEKYSRSLTRTYQNVYVCTGPLFLPRTEADGKSYVKYQVIGKNHVAVPTHFFKVLILEAAGGQIELRSYVMPNAPVDEAILLERFLVPIESIEWASGLLFVPNILARTSNLKAITAGSK
SIO_010081: LOC102514528
subclass of: SO_0000673
so part of: LOC102514528
location: 2296694..2297608
location: region:2296694-2297608:1
so has part: feature:2296694-2297608:1:exon

XP_032325795.1
type: Protein
SIO_000068: ncbiprotein

position:2297608:1
position: 2297608
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2296694-2297608:1:exon

MMP16
type: Gene
subclass of: SO_0000704
RO_0002162: 419612
gene: MMP16
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2442689..2717589
location: region:2442689-2717589:1
so has part: feature:2442689-2717589:1:exon
subclass of: SO_0000010

102509964
type: Gene
SIO_000068: ncbigene

position:2442689:1
position: 2442689
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2717589:1
position: 2717589
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2442689-2717589:1:exon

MMP16
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 419612
gene: MMP16
product: matrix metallopeptidase 16
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 32 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 19 samples with support for all annotated introns
transcript id: XM_006193949.2
SIO_010081: MMP16
subclass of: SO_0000673
so part of: MMP16
location: join(2442689..2443189,2576782..2576930,2586288..2586410,2597610..2597914,2642707..2642868,2644803..2645014,2684931..2685069,2700671..2700821,2709727..2709842,2716011..2717589)
location: region:2442689-2717589:1
so has part: feature:2442689-2443189:1:exon
so has part: feature:2576782-2576930:1:exon
so has part: feature:2586288-2586410:1:exon
so has part: feature:2597610-2597914:1:exon
so has part: feature:2642707-2642868:1:exon
so has part: feature:2644803-2645014:1:exon
so has part: feature:2684931-2685069:1:exon
so has part: feature:2700671-2700821:1:exon
so has part: feature:2709727-2709842:1:exon
so has part: feature:2716011-2717589:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2442689-2443189:1:exon

position:2443189:1
position: 2443189
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2576782-2576930:1:exon

position:2576782:1
position: 2576782
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2576930:1
position: 2576930
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2586288-2586410:1:exon

position:2586288:1
position: 2586288
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2586410:1
position: 2586410
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2597610-2597914:1:exon

position:2597610:1
position: 2597610
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2597914:1
position: 2597914
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2642707-2642868:1:exon

position:2642707:1
position: 2642707
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2642868:1
position: 2642868
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2644803-2645014:1:exon

position:2644803:1
position: 2644803
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2645014:1
position: 2645014
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:2684931-2685069:1:exon

position:2684931:1
position: 2684931
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2685069:1
position: 2685069
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:2700671-2700821:1:exon

position:2700671:1
position: 2700671
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2700821:1
position: 2700821
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:2709727-2709842:1:exon

position:2709727:1
position: 2709727
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2709842:1
position: 2709842
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:2716011-2717589:1:exon

position:2716011:1
position: 2716011
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

MMP16
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 419612
gene: MMP16
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: matrix metalloproteinase-16
translation: MILLTFGTGRRLDFVHHSGAFFLQTLLWILCATVCGTEQYFNVEVWLQKYGYLPPTDPRMSVLRSAETMQSALAAMQQFYGINMTGKVDRNTIDWMKKPRCGVPDQTRGSSKFNIRRKRYALTGQKWQHKHITYSIKNVTPKVGDPETRKAIRRAFDVWQNVTPLTFEEVPYSELENGKRDVDITIIFASGFHGDSSPFDGEGGFLAHAYFPGPGIGGDTHFDSDEPWTLGNPNHDGNDLFLVAVHELGHALGLEHSNDPTAIMAPFYQYMETDNFKLPNDDLQGIQKIYGPPDKIPPPTRPLPTVPPHRSIPPADPRKNDRPKPPRPPTGRPSYPGAKPNICDGNFNTLAILRREMFVFKDQWFWRVRNNRVMDGYPMQITYFWRGLPPSIDAVYENSDGNFVFFKGNKYWVFKDTTLQPGYPHDLISLGSGIPPHGIDSAIWWEDVGKTYFFKGDRYWRYSEEMKTMDPGYPKPITVWKGIPESPQGAFVHKENGFTYFYKGKEYWKFNNQILKVEPGYPRSILKDFMGCDGPTDRDKEGHSPPDDVDIVIKLDNTASTVKAIAIVIPCILALCLLVLVYTVFQFKRKGTPRHILYCKRSMQEWV
SIO_010081: MMP16
subclass of: SO_0000673
so part of: MMP16
location: join(2443058..2443189,2576782..2576930,2586288..2586410,2597610..2597914,2642707..2642868,2644803..2645014,2684931..2685069,2700671..2700821,2709727..2709842,2716011..2716345)
location: region:2443058-2716345:1
so has part: feature:2443058-2443189:1:exon
so has part: feature:2576782-2576930:1:exon
so has part: feature:2586288-2586410:1:exon
so has part: feature:2597610-2597914:1:exon
so has part: feature:2642707-2642868:1:exon
so has part: feature:2644803-2645014:1:exon
so has part: feature:2684931-2685069:1:exon
so has part: feature:2700671-2700821:1:exon
so has part: feature:2709727-2709842:1:exon
so has part: feature:2716011-2716345:1:exon

XP_006194011.1
type: Protein
SIO_000068: ncbiprotein

position:2443058:1
position: 2443058
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2716345:1
position: 2716345
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2443058-2443189:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2576782-2576930:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2586288-2586410:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2597610-2597914:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2642707-2642868:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2644803-2645014:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2684931-2685069:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2700671-2700821:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2709727-2709842:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2716011-2716345:1:exon

LOC116660504
type: Gene
subclass of: SO_0000704
RO_0002162: 419612
gene: LOC116660504
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2601314..2612335)
location: region:2601314-2612335:-1
so has part: feature:2601314-2612335:-1:exon
subclass of: SO_0000011

116660504
type: Gene
SIO_000068: ncbigene

position:2601314:-1
position: 2601314
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2612335:-1
position: 2612335
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2601314-2612335:-1:exon

LOC116660504
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 419612
nc RNA class: lncRNA
gene: LOC116660504
product: uncharacterized LOC116660504
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XR_004316058.1
SIO_010081: LOC116660504
subclass of: SO_0000673
so part of: LOC116660504
location: complement(join(2601314..2601326,2608906..2608910,2611948..2612335))
location: region:2601314-2612335:-1
so has part: feature:2611948-2612335:-1:exon
so has part: feature:2608906-2608910:-1:exon
so has part: feature:2601314-2601326:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2611948-2612335:-1:exon

position:2611948:-1
position: 2611948
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2608906-2608910:-1:exon

position:2608906:-1
position: 2608906
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2608910:-1
position: 2608910
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2601314-2601326:-1:exon

position:2601326:-1
position: 2601326
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC116660439
type: Gene
subclass of: SO_0000704
RO_0002162: 419612
gene: LOC116660439
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 3090496..3106911
location: region:3090496-3106911:1
so has part: feature:3090496-3106911:1:exon
subclass of: SO_0000011

116660439
type: Gene
SIO_000068: ncbigene

position:3090496:1
position: 3090496
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3106911:1
position: 3106911
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3090496-3106911:1:exon

LOC116660439
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 419612
nc RNA class: lncRNA
gene: LOC116660439
product: uncharacterized LOC116660439
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XR_004315959.1
SIO_010081: LOC116660439
subclass of: SO_0000673
so part of: LOC116660439
location: join(3090496..3090506,3091228..3091233,3106833..3106911)
location: region:3090496-3106911:1
so has part: feature:3090496-3090506:1:exon
so has part: feature:3091228-3091233:1:exon
so has part: feature:3106833-3106911:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3090496-3090506:1:exon

position:3090506:1
position: 3090506
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3091228-3091233:1:exon

position:3091228:1
position: 3091228
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3091233:1
position: 3091233
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3106833-3106911:1:exon

position:3106833:1
position: 3106833
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

CNBD1
type: Gene
subclass of: SO_0000704
RO_0002162: 419612
gene: CNBD1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(3121265..3351697)
location: region:3121265-3351697:-1
so has part: feature:3121265-3351697:-1:exon
subclass of: SO_0000010

102514288
type: Gene
SIO_000068: ncbigene

position:3121265:-1
position: 3121265
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3351697:-1
position: 3351697
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3121265-3351697:-1:exon

CNBD1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 419612
gene: CNBD1
product: cyclic nucleotide binding domain containing 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 39% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_032469909.1
SIO_010081: CNBD1
subclass of: SO_0000673
so part of: CNBD1
location: complement(join(3121265..3121403,3140334..3140518,3142140..3142249,3177066..3177198,3178390..3178527,3198007..3198200,3211145..3211290,3309557..3309715,3325547..3325650,3330341..3330353,3335664..3335730,3351024..3351697))
location: region:3121265-3351697:-1
so has part: feature:3351024-3351697:-1:exon
so has part: feature:3335664-3335730:-1:exon
so has part: feature:3330341-3330353:-1:exon
so has part: feature:3325547-3325650:-1:exon
so has part: feature:3309557-3309715:-1:exon
so has part: feature:3211145-3211290:-1:exon
so has part: feature:3198007-3198200:-1:exon
so has part: feature:3178390-3178527:-1:exon
so has part: feature:3177066-3177198:-1:exon
so has part: feature:3142140-3142249:-1:exon
so has part: feature:3140334-3140518:-1:exon
so has part: feature:3121265-3121403:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3351024-3351697:-1:exon

position:3351024:-1
position: 3351024
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3335664-3335730:-1:exon

position:3335664:-1
position: 3335664
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3335730:-1
position: 3335730
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3330341-3330353:-1:exon

position:3330341:-1
position: 3330341
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3330353:-1
position: 3330353
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3325547-3325650:-1:exon

position:3325547:-1
position: 3325547
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3325650:-1
position: 3325650
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:3309557-3309715:-1:exon

position:3309557:-1
position: 3309557
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3309715:-1
position: 3309715
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:3211145-3211290:-1:exon

position:3211145:-1
position: 3211145
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3211290:-1
position: 3211290
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:3198007-3198200:-1:exon

position:3198007:-1
position: 3198007
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3198200:-1
position: 3198200
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:3178390-3178527:-1:exon

position:3178390:-1
position: 3178390
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3178527:-1
position: 3178527
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:3177066-3177198:-1:exon

position:3177066:-1
position: 3177066
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3177198:-1
position: 3177198
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:3142140-3142249:-1:exon

position:3142140:-1
position: 3142140
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3142249:-1
position: 3142249
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:3140334-3140518:-1:exon

position:3140334:-1
position: 3140334
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3140518:-1
position: 3140518
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:3121265-3121403:-1:exon

position:3121403:-1
position: 3121403
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

CNBD1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 419612
gene: CNBD1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cyclic nucleotide-binding domain-containing protein 1
translation: MPKSPLPEAILSRMVAISNLPPPPPRSIPSLKMSKLIDYGQLNALCHRRGLHQRNLRNILSAHNMFIKEYPKIFLKKKTKLPKLFEEEGKRKPAEGTEESQPQQPDDSHNVAIHVKKEHGGLTLYGPKKSEEQLTEFLAILKKLPIHRTPSEHNAVWKMLKKIPDLTSQLIDEHLKILSKSVISETWIKGSTVVGNDGFYVILKGVARPRTQMYKNLIEENEPTASFIPQNFHSFAFSEELRDSVVSAMHIPSCDPVLGQWSTFGTLEVTAKIESETKAYSVVTEEDCEILKIPAKNCAKLKSEKTKLENKRKVKLILKCPYYKEWPTLSIYELVALIKWKTFPPGHVIVESGNIISFVAYINSGYCKIYRNIVGLSKPQSKKVKKVQKLVYMGTLQEKESFGEISVLLQVPFTCTVVTGNGVEMAIIEDKDLFGKYINILYLTVISSTSSASAASETARPTLPHAPPPQPTQHEDDNDEDLYDDLPPLNE
SIO_010081: CNBD1
subclass of: SO_0000673
so part of: CNBD1
location: complement(join(3121265..3121403,3140334..3140518,3142140..3142249,3177066..3177198,3178390..3178527,3198007..3198200,3211145..3211290,3309557..3309715,3325547..3325650,3330341..3330353,3335664..3335730,3351024..3351111))
location: region:3121265-3351111:-1
so has part: feature:3351024-3351111:-1:exon
so has part: feature:3335664-3335730:-1:exon
so has part: feature:3330341-3330353:-1:exon
so has part: feature:3325547-3325650:-1:exon
so has part: feature:3309557-3309715:-1:exon
so has part: feature:3211145-3211290:-1:exon
so has part: feature:3198007-3198200:-1:exon
so has part: feature:3178390-3178527:-1:exon
so has part: feature:3177066-3177198:-1:exon
so has part: feature:3142140-3142249:-1:exon
so has part: feature:3140334-3140518:-1:exon
so has part: feature:3121265-3121403:-1:exon

XP_032325800.1
type: Protein
SIO_000068: ncbiprotein

position:3351111:-1
position: 3351111
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3351024-3351111:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3335664-3335730:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3330341-3330353:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3325547-3325650:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3309557-3309715:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3211145-3211290:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3198007-3198200:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3178390-3178527:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3177066-3177198:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3142140-3142249:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3140334-3140518:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3121265-3121403:-1:exon

TRNAA-UGC
type: Gene
subclass of: SO_0000704
RO_0002162: 419612
gene: TRNAA-UGC
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
so part of: sequence
location: complement(3181019..3181090)
location: region:3181019-3181090:-1
so has part: feature:3181019-3181090:-1:exon
subclass of: SO_0000663

116660569
type: Gene
SIO_000068: ncbigene

position:3181019:-1
position: 3181019
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3181090:-1
position: 3181090
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3181019-3181090:-1:exon

TRNAA-UGC
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 419612
gene: TRNAA-UGC
product: tRNA-Ala
inference: COORDINATES: profile:tRNAscan-SE:1.23
note: transfer RNA alanine (anticodon UGC); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:complement(3181056..3181058),aa:Ala, seq:tgc)
SIO_010081: TRNAA-UGC
subclass of: SO_0000673
so part of: TRNAA-UGC
location: complement(3181019..3181090)
location: region:3181019-3181090:-1
so has part: feature:3181019-3181090:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3181019-3181090:-1:exon

TRNAT-GGU
type: Gene
subclass of: SO_0000704
RO_0002162: 419612
gene: TRNAT-GGU
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
so part of: sequence
location: 3348763..3348834
location: region:3348763-3348834:1
so has part: feature:3348763-3348834:1:exon
subclass of: SO_0000663

116660574
type: Gene
SIO_000068: ncbigene

position:3348763:1
position: 3348763
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3348834:1
position: 3348834
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3348763-3348834:1:exon

TRNAT-GGU
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 419612
gene: TRNAT-GGU
product: tRNA-Thr
inference: COORDINATES: profile:tRNAscan-SE:1.23
note: transfer RNA threonine (anticodon GGU); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:3348795..3348797,aa:Thr,seq:ggt)
SIO_010081: TRNAT-GGU
subclass of: SO_0000673
so part of: TRNAT-GGU
location: 3348763..3348834
location: region:3348763-3348834:1
so has part: feature:3348763-3348834:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3348763-3348834:1:exon

CNGB3
type: Gene
subclass of: SO_0000704
RO_0002162: 419612
gene: CNGB3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 3450523..3560527
location: region:3450523-3560527:1
so has part: feature:3450523-3560527:1:exon
subclass of: SO_0000010

102509725
type: Gene
SIO_000068: ncbigene

position:3450523:1
position: 3450523
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3560527:1
position: 3560527
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3450523-3560527:1:exon

CNGB3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 419612
gene: CNGB3
product: cyclic nucleotide gated channel subunit beta 3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins, and 59% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_032469998.1
SIO_010081: CNGB3
subclass of: SO_0000673
so part of: CNGB3
location: join(3450523..3450683,3454279..3454360,3465877..3466003,3493012..3493166,3494538..3494666,3495531..3495739,3501108..3501158,3503650..3503736,3506836..3506900,3507648..3507770,3516941..3517082,3521003..3521162,3523038..3523129,3525706..3525711,3537249..3537332,3543157..3543275,3557127..3557273,3557506..3557680,3560005..3560527)
location: region:3450523-3560527:1
so has part: feature:3450523-3450683:1:exon
so has part: feature:3454279-3454360:1:exon
so has part: feature:3465877-3466003:1:exon
so has part: feature:3493012-3493166:1:exon
so has part: feature:3494538-3494666:1:exon
so has part: feature:3495531-3495739:1:exon
so has part: feature:3501108-3501158:1:exon
so has part: feature:3503650-3503736:1:exon
so has part: feature:3506836-3506900:1:exon
so has part: feature:3507648-3507770:1:exon
so has part: feature:3516941-3517082:1:exon
so has part: feature:3521003-3521162:1:exon
so has part: feature:3523038-3523129:1:exon
so has part: feature:3525706-3525711:1:exon
so has part: feature:3537249-3537332:1:exon
so has part: feature:3543157-3543275:1:exon
so has part: feature:3557127-3557273:1:exon
so has part: feature:3557506-3557680:1:exon
so has part: feature:3560005-3560527:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3450523-3450683:1:exon

position:3450683:1
position: 3450683
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3454279-3454360:1:exon

position:3454279:1
position: 3454279
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3454360:1
position: 3454360
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3465877-3466003:1:exon

position:3465877:1
position: 3465877
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3466003:1
position: 3466003
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3493012-3493166:1:exon

position:3493012:1
position: 3493012
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3493166:1
position: 3493166
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:3494538-3494666:1:exon

position:3494538:1
position: 3494538
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3494666:1
position: 3494666
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:3495531-3495739:1:exon

position:3495531:1
position: 3495531
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3495739:1
position: 3495739
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:3501108-3501158:1:exon

position:3501108:1
position: 3501108
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3501158:1
position: 3501158
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:3503650-3503736:1:exon

position:3503650:1
position: 3503650
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3503736:1
position: 3503736
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:3506836-3506900:1:exon

position:3506836:1
position: 3506836
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3506900:1
position: 3506900
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:3507648-3507770:1:exon

position:3507648:1
position: 3507648
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3507770:1
position: 3507770
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:3516941-3517082:1:exon

position:3516941:1
position: 3516941
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3517082:1
position: 3517082
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:3521003-3521162:1:exon

position:3521003:1
position: 3521003
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3521162:1
position: 3521162
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:3523038-3523129:1:exon

position:3523038:1
position: 3523038
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3523129:1
position: 3523129
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:3525706-3525711:1:exon

position:3525706:1
position: 3525706
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3525711:1
position: 3525711
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:3537249-3537332:1:exon

position:3537249:1
position: 3537249
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3537332:1
position: 3537332
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:3543157-3543275:1:exon

position:3543157:1
position: 3543157
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3543275:1
position: 3543275
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:3557127-3557273:1:exon

position:3557127:1
position: 3557127
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3557273:1
position: 3557273
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:3557506-3557680:1:exon

position:3557506:1
position: 3557506
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3557680:1
position: 3557680
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:3560005-3560527:1:exon

position:3560005:1
position: 3560005
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

CNGB3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 419612
gene: CNGB3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cyclic nucleotide-gated cation channel beta-3
translation: MLKSLTIKFNKVKPSEENDENKRGPGTRSEPPRPTTQGENKNEKKSLETEMPPVSSEESHTKIQDKTSEKTALRNQTVNPDSQNPAESTGTKPEQEDMGPGKEGLVSPKTKPLGAPVINEYADAQLHNLVRRLRQRTDFYKKKLAEDDLSSPEASPQTAKPTVVSSAQESSAMLKEEHHQKVPLTEHLKRIRLPRSIDSYTDRFYLLWLLPVAIAYNWNCWLVPLRAVFPYQTPDNTHYWLVTDIACDFIYLFDLLLIQPRLQFMRGGDIIVDSNELKRHYRSSTKFQLDVASIMPFDVFYLFFGFNPIFRINRMLKYTSFFEFNHHLESIMNKAYIYRVIRTTGYLLFTLHINACLYYWASDYEGIGSTRWVYDGEGNKYLRCYYWAVRSLITIGGLPEPQTTFEIVFQLLNFFSGVFVFSSLIGQMQDVIGAATANQNNFRACMDHTVAYMNTYSIPKIVQNRVRTWYEYTWDSQRMLDESDLLETLPTTMQLALTVDVNFSIISKVRLFEGCDTQMIYDMLLKLKSIVYLPGDFVCKKGEIGKEMYIIKQGEVQVLGGADGAQVLVTLKAGAVFGEISLLAARGGNRRTANVVAHGFANLLTLDKKTLQEILVHYPDSEKLLMKKARVLLKKKAPGKGATPPNKGLAFLFPPKQETPKMFKALLGGAGKAGLARLLTLKREQAIQEKSENAEGEEDKTKEHEEKGSEPAETPLDAAKHGANSVTAEARPQPIRRAGLPRGTTGQSLIISMAPSAEAGEEVLTIEVKEKAKQ
SIO_010081: CNGB3
subclass of: SO_0000673
so part of: CNGB3
location: join(3450573..3450683,3454279..3454360,3465877..3466003,3493012..3493166,3494538..3494666,3495531..3495739,3501108..3501158,3503650..3503736,3506836..3506900,3507648..3507770,3516941..3517082,3521003..3521162,3523038..3523129,3525706..3525711,3537249..3537332,3543157..3543275,3557127..3557273,3557506..3557680,3560005..3560265)
location: region:3450573-3560265:1
so has part: feature:3450573-3450683:1:exon
so has part: feature:3454279-3454360:1:exon
so has part: feature:3465877-3466003:1:exon
so has part: feature:3493012-3493166:1:exon
so has part: feature:3494538-3494666:1:exon
so has part: feature:3495531-3495739:1:exon
so has part: feature:3501108-3501158:1:exon
so has part: feature:3503650-3503736:1:exon
so has part: feature:3506836-3506900:1:exon
so has part: feature:3507648-3507770:1:exon
so has part: feature:3516941-3517082:1:exon
so has part: feature:3521003-3521162:1:exon
so has part: feature:3523038-3523129:1:exon
so has part: feature:3525706-3525711:1:exon
so has part: feature:3537249-3537332:1:exon
so has part: feature:3543157-3543275:1:exon
so has part: feature:3557127-3557273:1:exon
so has part: feature:3557506-3557680:1:exon
so has part: feature:3560005-3560265:1:exon

XP_032325889.1
type: Protein
SIO_000068: ncbiprotein

position:3450573:1
position: 3450573
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3560265:1
position: 3560265
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3450573-3450683:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3454279-3454360:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3465877-3466003:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3493012-3493166:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3494538-3494666:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3495531-3495739:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3501108-3501158:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3503650-3503736:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3506836-3506900:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3507648-3507770:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3516941-3517082:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3521003-3521162:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3523038-3523129:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:3525706-3525711:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:3537249-3537332:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:3543157-3543275:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:3557127-3557273:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:3557506-3557680:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:3560005-3560265:1:exon

LOC116660455
type: Gene
subclass of: SO_0000704
RO_0002162: 419612
gene: LOC116660455
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 3480115..3490306
location: region:3480115-3490306:1
so has part: feature:3480115-3490306:1:exon
subclass of: SO_0000011

116660455
type: Gene
SIO_000068: ncbigene

position:3480115:1
position: 3480115
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3490306:1
position: 3490306
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3480115-3490306:1:exon

LOC116660455
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 419612
nc RNA class: lncRNA
gene: LOC116660455
product: uncharacterized LOC116660455
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XR_004315992.1
SIO_010081: LOC116660455
subclass of: SO_0000673
so part of: LOC116660455
location: join(3480115..3480324,3480429..3480434,3490295..3490306)
location: region:3480115-3490306:1
so has part: feature:3480115-3480324:1:exon
so has part: feature:3480429-3480434:1:exon
so has part: feature:3490295-3490306:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3480115-3480324:1:exon

position:3480324:1
position: 3480324
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3480429-3480434:1:exon

position:3480429:1
position: 3480429
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3480434:1
position: 3480434
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3490295-3490306:1:exon

position:3490295:1
position: 3490295
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

CPNE3
type: Gene
subclass of: SO_0000704
RO_0002162: 419612
gene: CPNE3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(3575633..3609626)
location: region:3575633-3609626:-1
so has part: feature:3575633-3609626:-1:exon
subclass of: SO_0000010

102513800
type: Gene
SIO_000068: ncbigene

position:3575633:-1
position: 3575633
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3609626:-1
position: 3609626
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3575633-3609626:-1:exon

CPNE3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 419612
gene: CPNE3
product: copine 3
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 34 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
transcript id: XM_014567026.2
SIO_010081: CPNE3
subclass of: SO_0000673
so part of: CPNE3
location: complement(join(3575633..3579395,3581289..3581525,3582615..3582748,3585910..3585961,3586044..3586098,3589852..3589985,3590527..3590586,3591465..3591551,3594508..3594606,3597955..3598044,3598948..3599031,3600752..3600823,3602135..3602209,3603787..3603967,3604245..3604384,3609608..3609626))
location: region:3575633-3609626:-1
so has part: feature:3609608-3609626:-1:exon
so has part: feature:3604245-3604384:-1:exon
so has part: feature:3603787-3603967:-1:exon
so has part: feature:3602135-3602209:-1:exon
so has part: feature:3600752-3600823:-1:exon
so has part: feature:3598948-3599031:-1:exon
so has part: feature:3597955-3598044:-1:exon
so has part: feature:3594508-3594606:-1:exon
so has part: feature:3591465-3591551:-1:exon
so has part: feature:3590527-3590586:-1:exon
so has part: feature:3589852-3589985:-1:exon
so has part: feature:3586044-3586098:-1:exon
so has part: feature:3585910-3585961:-1:exon
so has part: feature:3582615-3582748:-1:exon
so has part: feature:3581289-3581525:-1:exon
so has part: feature:3575633-3579395:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3609608-3609626:-1:exon

position:3609608:-1
position: 3609608
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3604245-3604384:-1:exon

position:3604245:-1
position: 3604245
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3604384:-1
position: 3604384
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3603787-3603967:-1:exon

position:3603787:-1
position: 3603787
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3603967:-1
position: 3603967
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3602135-3602209:-1:exon

position:3602135:-1
position: 3602135
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3602209:-1
position: 3602209
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:3600752-3600823:-1:exon

position:3600752:-1
position: 3600752
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3600823:-1
position: 3600823
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:3598948-3599031:-1:exon

position:3598948:-1
position: 3598948
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3599031:-1
position: 3599031
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:3597955-3598044:-1:exon

position:3597955:-1
position: 3597955
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3598044:-1
position: 3598044
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:3594508-3594606:-1:exon

position:3594508:-1
position: 3594508
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3594606:-1
position: 3594606
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:3591465-3591551:-1:exon

position:3591465:-1
position: 3591465
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3591551:-1
position: 3591551
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:3590527-3590586:-1:exon

position:3590527:-1
position: 3590527
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3590586:-1
position: 3590586
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:3589852-3589985:-1:exon

position:3589852:-1
position: 3589852
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3589985:-1
position: 3589985
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:3586044-3586098:-1:exon

position:3586044:-1
position: 3586044
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3586098:-1
position: 3586098
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:3585910-3585961:-1:exon

position:3585910:-1
position: 3585910
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3585961:-1
position: 3585961
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:3582615-3582748:-1:exon

position:3582615:-1
position: 3582615
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3582748:-1
position: 3582748
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:3581289-3581525:-1:exon

position:3581289:-1
position: 3581289
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3581525:-1
position: 3581525
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:3575633-3579395:-1:exon

position:3579395:-1
position: 3579395
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

CPNE3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 419612
gene: CPNE3
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: copine-3
translation: MAAQCVTKVELNISCDNLLDADVGSKSDPLCVLFLNTSGQQWYEVDRTERIKNCLNPKFSKTFIIDYYFEVVQKLKFGIYDIDNKTIELSDDDFLGECECTLGQIVSSKKLTRPLVLKNGRPAGKGSITISAEEIKDNRVVLFEMEARKLDNKDLFGKSDPYLEFHKQTSDGNWLMVHRTEVIKNNLNPVWRPFKISLNSLCYGDMDKTIKVECYDYDNDGSHDLIGTFQTTMTKLKGASRNSPIEFECINEKKRQKKKSYKNSGIISVKQCEITVECTFLDYIMGGCQLNFTVGVDFTGSNGDPRSPDSLHYISPNGVNEYLTAIWSVGLVVQDYDADKMFPAFGFGAQVPPQWQVSHEFPMNFNPSNPYCNGIQGIVEAYRACLPQIKLYGPTNFSPIINHVARFAAAATQQQTASQYFVLLIITDGVITDLDETRQAIVNAAKLPMSIIIVGVGGADFSAMEFLDGDGGSLRSPSGEVAIRDIVQFVPFRQFQNAPKEALAQCVLAEIPQQVVGYFNTYKLLPPKNPAAQ
SIO_010081: CPNE3
subclass of: SO_0000673
so part of: CPNE3
location: complement(join(3579285..3579395,3581289..3581525,3582615..3582748,3585910..3585961,3586044..3586098,3589852..3589985,3590527..3590586,3591465..3591551,3594508..3594606,3597955..3598044,3598948..3599031,3600752..3600823,3602135..3602209,3603787..3603967,3604245..3604376))
location: region:3579285-3604376:-1
so has part: feature:3604245-3604376:-1:exon
so has part: feature:3603787-3603967:-1:exon
so has part: feature:3602135-3602209:-1:exon
so has part: feature:3600752-3600823:-1:exon
so has part: feature:3598948-3599031:-1:exon
so has part: feature:3597955-3598044:-1:exon
so has part: feature:3594508-3594606:-1:exon
so has part: feature:3591465-3591551:-1:exon
so has part: feature:3590527-3590586:-1:exon
so has part: feature:3589852-3589985:-1:exon
so has part: feature:3586044-3586098:-1:exon
so has part: feature:3585910-3585961:-1:exon
so has part: feature:3582615-3582748:-1:exon
so has part: feature:3581289-3581525:-1:exon
so has part: feature:3579285-3579395:-1:exon

XP_014422512.1
type: Protein
SIO_000068: ncbiprotein

position:3579285:-1
position: 3579285
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3604376:-1
position: 3604376
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3604245-3604376:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3603787-3603967:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3602135-3602209:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3600752-3600823:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3598948-3599031:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3597955-3598044:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3594508-3594606:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3591465-3591551:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3590527-3590586:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3589852-3589985:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3586044-3586098:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3585910-3585961:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3582615-3582748:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:3581289-3581525:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:3579285-3579395:-1:exon

RMDN1
type: Gene
subclass of: SO_0000704
RO_0002162: 419612
gene: RMDN1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 3617396..3641317
location: region:3617396-3641317:1
so has part: feature:3617396-3641317:1:exon
subclass of: SO_0000010

102513559
type: Gene
SIO_000068: ncbigene

position:3617396:1
position: 3617396
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3641317:1
position: 3641317
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3617396-3641317:1:exon

RMDN1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 419612
gene: RMDN1
product: regulator of microtubule dynamics 1, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 32 samples with support for all annotated introns
transcript id: XM_032469933.1
SIO_010081: RMDN1
subclass of: SO_0000673
so part of: RMDN1
location: join(3617396..3617672,3620618..3620735,3625162..3625258,3626915..3627074,3631257..3631346,3636719..3636749,3639081..3639214,3639636..3639761)
location: region:3617396-3639761:1
so has part: feature:3617396-3617672:1:exon
so has part: feature:3620618-3620735:1:exon
so has part: feature:3625162-3625258:1:exon
so has part: feature:3626915-3627074:1:exon
so has part: feature:3631257-3631346:1:exon
so has part: feature:3636719-3636749:1:exon
so has part: feature:3639081-3639214:1:exon
so has part: feature:3639636-3639761:1:exon

position:3639761:1
position: 3639761
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3617396-3617672:1:exon

position:3617672:1
position: 3617672
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3620618-3620735:1:exon

position:3620618:1
position: 3620618
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3620735:1
position: 3620735
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3625162-3625258:1:exon

position:3625162:1
position: 3625162
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3625258:1
position: 3625258
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3626915-3627074:1:exon

position:3626915:1
position: 3626915
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3627074:1
position: 3627074
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:3631257-3631346:1:exon

position:3631257:1
position: 3631257
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3631346:1
position: 3631346
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:3636719-3636749:1:exon

position:3636719:1
position: 3636719
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3636749:1
position: 3636749
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:3639081-3639214:1:exon

position:3639081:1
position: 3639081
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3639214:1
position: 3639214
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:3639636-3639761:1:exon

position:3639636:1
position: 3639636
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

RMDN1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 419612
gene: RMDN1
product: regulator of microtubule dynamics 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 24 samples with support for all annotated introns
transcript id: XM_032469930.1
SIO_010081: RMDN1
subclass of: SO_0000673
so part of: RMDN1
location: join(3617397..3617672,3620618..3620735,3625162..3625258,3626915..3627074,3631257..3631346,3634185..3634240,3635561..3635648,3636719..3636749,3639081..3639214,3640894..3641317)
location: region:3617397-3641317:1
so has part: feature:3617397-3617672:1:exon
so has part: feature:3620618-3620735:1:exon
so has part: feature:3625162-3625258:1:exon
so has part: feature:3626915-3627074:1:exon
so has part: feature:3631257-3631346:1:exon
so has part: feature:3634185-3634240:1:exon
so has part: feature:3635561-3635648:1:exon
so has part: feature:3636719-3636749:1:exon
so has part: feature:3639081-3639214:1:exon
so has part: feature:3640894-3641317:1:exon

position:3617397:1
position: 3617397
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3617397-3617672:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3620618-3620735:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3625162-3625258:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3626915-3627074:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3631257-3631346:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3634185-3634240:1:exon

position:3634185:1
position: 3634185
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3634240:1
position: 3634240
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:3635561-3635648:1:exon

position:3635561:1
position: 3635561
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3635648:1
position: 3635648
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:3636719-3636749:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3639081-3639214:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3640894-3641317:1:exon

position:3640894:1
position: 3640894
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

RMDN1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 419612
gene: RMDN1
product: regulator of microtubule dynamics 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 mRNAs, 6 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 40 samples with support for all annotated introns
transcript id: XM_032469929.1
SIO_010081: RMDN1
subclass of: SO_0000673
so part of: RMDN1
location: join(3617454..3617672,3620618..3620735,3625162..3625258,3626915..3627074,3631257..3631346,3634185..3634240,3635561..3635648,3636719..3636749,3639081..3639214,3639636..3639761)
location: region:3617454-3639761:1
so has part: feature:3617454-3617672:1:exon
so has part: feature:3620618-3620735:1:exon
so has part: feature:3625162-3625258:1:exon
so has part: feature:3626915-3627074:1:exon
so has part: feature:3631257-3631346:1:exon
so has part: feature:3634185-3634240:1:exon
so has part: feature:3635561-3635648:1:exon
so has part: feature:3636719-3636749:1:exon
so has part: feature:3639081-3639214:1:exon
so has part: feature:3639636-3639761:1:exon

position:3617454:1
position: 3617454
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3617454-3617672:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3620618-3620735:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3625162-3625258:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3626915-3627074:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3631257-3631346:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3634185-3634240:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3635561-3635648:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3636719-3636749:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3639081-3639214:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3639636-3639761:1:exon

RMDN1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 419612
gene: RMDN1
product: regulator of microtubule dynamics 1, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 96% coverage of the annotated genomic feature by RNAseq alignments, including 36 samples with support for all annotated introns
transcript id: XM_032469932.1
SIO_010081: RMDN1
subclass of: SO_0000673
so part of: RMDN1
location: join(3617494..3617641,3620618..3620735,3625162..3625258,3626915..3627074,3631257..3631346,3634185..3634240,3635561..3635648,3636719..3636749,3639081..3639214,3639636..3639686)
location: region:3617494-3639686:1
so has part: feature:3617494-3617641:1:exon
so has part: feature:3620618-3620735:1:exon
so has part: feature:3625162-3625258:1:exon
so has part: feature:3626915-3627074:1:exon
so has part: feature:3631257-3631346:1:exon
so has part: feature:3634185-3634240:1:exon
so has part: feature:3635561-3635648:1:exon
so has part: feature:3636719-3636749:1:exon
so has part: feature:3639081-3639214:1:exon
so has part: feature:3639636-3639686:1:exon

position:3617494:1
position: 3617494
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3639686:1
position: 3639686
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3617494-3617641:1:exon

position:3617641:1
position: 3617641
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3620618-3620735:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3625162-3625258:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3626915-3627074:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3631257-3631346:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3634185-3634240:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3635561-3635648:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3636719-3636749:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3639081-3639214:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3639636-3639686:1:exon

RMDN1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 419612
gene: RMDN1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: regulator of microtubule dynamics protein 1 isoform X2
translation: MAVAVRLGRFLPLGRSSAPAPRLPTCAAGSRGRCVPWRPRGSEVMGNPGAFKRSLLFSALSYLGFETYQVISQAAVVHAAAKVFRIEEILEQADYLYESGETEKLYQLLSQYKESEDAELLWRLARASRDIAQLSGTSEEEKKLLVYEALEYAKRALEKNESSFAAHKWYAICISDVGDYEGIKAKIANSYIIKEHFEKAIELNPKDATSVHLMGIWCYTFAEMPWYQRRIAKMLFAAPPSSTYEEALGYFHRAEQVDPNFYSKNLLLLGKTYLKLRNKKLAAFWLTKAKDYPAHTEEDKQH
SIO_010081: RMDN1
subclass of: SO_0000673
so part of: RMDN1
location: join(3617544..3617672,3620618..3620735,3625162..3625258,3626915..3627074,3631257..3631346,3634185..3634240,3635561..3635648,3636719..3636749,3639081..3639214,3640894..3640899)
location: region:3617544-3640899:1
so has part: feature:3617544-3617672:1:exon
so has part: feature:3620618-3620735:1:exon
so has part: feature:3625162-3625258:1:exon
so has part: feature:3626915-3627074:1:exon
so has part: feature:3631257-3631346:1:exon
so has part: feature:3634185-3634240:1:exon
so has part: feature:3635561-3635648:1:exon
so has part: feature:3636719-3636749:1:exon
so has part: feature:3639081-3639214:1:exon
so has part: feature:3640894-3640899:1:exon

XP_032325821.1
type: Protein
SIO_000068: ncbiprotein

position:3617544:1
position: 3617544
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3640899:1
position: 3640899
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3617544-3617672:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3620618-3620735:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3625162-3625258:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3626915-3627074:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3631257-3631346:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3634185-3634240:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3635561-3635648:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3636719-3636749:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3639081-3639214:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3640894-3640899:1:exon

RMDN1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 419612
gene: RMDN1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: regulator of microtubule dynamics protein 1 isoform X1
translation: MAVAVRLGRFLPLGRSSAPAPRLPTCAAGSRGRCVPWRPRGSEVMGNPGAFKRSLLFSALSYLGFETYQVISQAAVVHAAAKVFRIEEILEQADYLYESGETEKLYQLLSQYKESEDAELLWRLARASRDIAQLSGTSEEEKKLLVYEALEYAKRALEKNESSFAAHKWYAICISDVGDYEGIKAKIANSYIIKEHFEKAIELNPKDATSVHLMGIWCYTFAEMPWYQRRIAKMLFAAPPSSTYEEALGYFHRAEQVDPNFYSKNLLLLGKTYLKLRNKKLAAFWLTKAKDYPAHTEEDKQVQTEAAQLLTGFSDKN
SIO_010081: RMDN1
subclass of: SO_0000673
so part of: RMDN1
location: join(3617544..3617672,3620618..3620735,3625162..3625258,3626915..3627074,3631257..3631346,3634185..3634240,3635561..3635648,3636719..3636749,3639081..3639214,3639636..3639686)
location: region:3617544-3639686:1
so has part: feature:3617544-3617672:1:exon
so has part: feature:3620618-3620735:1:exon
so has part: feature:3625162-3625258:1:exon
so has part: feature:3626915-3627074:1:exon
so has part: feature:3631257-3631346:1:exon
so has part: feature:3634185-3634240:1:exon
so has part: feature:3635561-3635648:1:exon
so has part: feature:3636719-3636749:1:exon
so has part: feature:3639081-3639214:1:exon
so has part: feature:3639636-3639686:1:exon

XP_032325820.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3617544-3617672:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3620618-3620735:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3625162-3625258:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3626915-3627074:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3631257-3631346:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3634185-3634240:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3635561-3635648:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3636719-3636749:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3639081-3639214:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3639636-3639686:1:exon

RMDN1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 419612
gene: RMDN1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: regulator of microtubule dynamics protein 1 isoform X4
translation: MAVAVRLGRFLPLGRSSAPAPRLPTCAAGSRGRCVPWRPRGSEVMGNPGAFKRSLLFSALSYLGFETYQVISQAAVVHAAAKVFRIEEILEQADYLYESGETEKLYQLLSQYKESEDAELLWRLARASRDIAQLSGTSEEEKKLLVYEALEYAKRALEKNESSFAAHKWYAICISDVGDYEGIKAKIANSYIIKEHFEALGYFHRAEQVDPNFYSKNLLLLGKTYLKLRNKKLAAFWLTKAKDYPAHTEEDKQVQTEAAQLLTGFSDKN
SIO_010081: RMDN1
subclass of: SO_0000673
so part of: RMDN1
location: join(3617544..3617672,3620618..3620735,3625162..3625258,3626915..3627074,3631257..3631346,3636719..3636749,3639081..3639214,3639636..3639686)
location: region:3617544-3639686:1
so has part: feature:3617544-3617672:1:exon
so has part: feature:3620618-3620735:1:exon
so has part: feature:3625162-3625258:1:exon
so has part: feature:3626915-3627074:1:exon
so has part: feature:3631257-3631346:1:exon
so has part: feature:3636719-3636749:1:exon
so has part: feature:3639081-3639214:1:exon
so has part: feature:3639636-3639686:1:exon

XP_032325824.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3617544-3617672:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3620618-3620735:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3625162-3625258:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3626915-3627074:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3631257-3631346:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3636719-3636749:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3639081-3639214:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3639636-3639686:1:exon

RMDN1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 419612
gene: RMDN1
product: regulator of microtubule dynamics 1, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 96% coverage of the annotated genomic feature by RNAseq alignments, including 34 samples with support for all annotated introns
transcript id: XM_032469931.1
SIO_010081: RMDN1
subclass of: SO_0000673
so part of: RMDN1
location: join(3617641..3617769,3620618..3620735,3625162..3625258,3626915..3627074,3631257..3631346,3634185..3634240,3635561..3635648,3636719..3636749,3639081..3639214,3639636..3639686)
location: region:3617641-3639686:1
so has part: feature:3617641-3617769:1:exon
so has part: feature:3620618-3620735:1:exon
so has part: feature:3625162-3625258:1:exon
so has part: feature:3626915-3627074:1:exon
so has part: feature:3631257-3631346:1:exon
so has part: feature:3634185-3634240:1:exon
so has part: feature:3635561-3635648:1:exon
so has part: feature:3636719-3636749:1:exon
so has part: feature:3639081-3639214:1:exon
so has part: feature:3639636-3639686:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3617641-3617769:1:exon

position:3617769:1
position: 3617769
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3620618-3620735:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3625162-3625258:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3626915-3627074:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3631257-3631346:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3634185-3634240:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3635561-3635648:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3636719-3636749:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3639081-3639214:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3639636-3639686:1:exon

RMDN1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 419612
gene: RMDN1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: regulator of microtubule dynamics protein 1 isoform X3
translation: MGNPGAFKRSLLFSALSYLGFETYQVISQAAVVHAAAKVFRIEEILEQADYLYESGETEKLYQLLSQYKESEDAELLWRLARASRDIAQLSGTSEEEKKLLVYEALEYAKRALEKNESSFAAHKWYAICISDVGDYEGIKAKIANSYIIKEHFEKAIELNPKDATSVHLMGIWCYTFAEMPWYQRRIAKMLFAAPPSSTYEEALGYFHRAEQVDPNFYSKNLLLLGKTYLKLRNKKLAAFWLTKAKDYPAHTEEDKQVQTEAAQLLTGFSDKN
SIO_010081: RMDN1
subclass of: SO_0000673
so part of: RMDN1
location: join(3620621..3620735,3625162..3625258,3626915..3627074,3631257..3631346,3634185..3634240,3635561..3635648,3636719..3636749,3639081..3639214,3639636..3639686)
location: region:3620621-3639686:1
so has part: feature:3620621-3620735:1:exon
so has part: feature:3625162-3625258:1:exon
so has part: feature:3626915-3627074:1:exon
so has part: feature:3631257-3631346:1:exon
so has part: feature:3634185-3634240:1:exon
so has part: feature:3635561-3635648:1:exon
so has part: feature:3636719-3636749:1:exon
so has part: feature:3639081-3639214:1:exon
so has part: feature:3639636-3639686:1:exon

XP_032325822.1
type: Protein
SIO_000068: ncbiprotein

position:3620621:1
position: 3620621
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3620621-3620735:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3625162-3625258:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3626915-3627074:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3631257-3631346:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3634185-3634240:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3635561-3635648:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3636719-3636749:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3639081-3639214:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3639636-3639686:1:exon

RMDN1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 419612
gene: RMDN1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: regulator of microtubule dynamics protein 1 isoform X3
translation: MGNPGAFKRSLLFSALSYLGFETYQVISQAAVVHAAAKVFRIEEILEQADYLYESGETEKLYQLLSQYKESEDAELLWRLARASRDIAQLSGTSEEEKKLLVYEALEYAKRALEKNESSFAAHKWYAICISDVGDYEGIKAKIANSYIIKEHFEKAIELNPKDATSVHLMGIWCYTFAEMPWYQRRIAKMLFAAPPSSTYEEALGYFHRAEQVDPNFYSKNLLLLGKTYLKLRNKKLAAFWLTKAKDYPAHTEEDKQVQTEAAQLLTGFSDKN
SIO_010081: RMDN1
subclass of: SO_0000673
so part of: RMDN1
location: join(3620621..3620735,3625162..3625258,3626915..3627074,3631257..3631346,3634185..3634240,3635561..3635648,3636719..3636749,3639081..3639214,3639636..3639686)
location: region:3620621-3639686:1
so has part: feature:3620621-3620735:1:exon
so has part: feature:3625162-3625258:1:exon
so has part: feature:3626915-3627074:1:exon
so has part: feature:3631257-3631346:1:exon
so has part: feature:3634185-3634240:1:exon
so has part: feature:3635561-3635648:1:exon
so has part: feature:3636719-3636749:1:exon
so has part: feature:3639081-3639214:1:exon
so has part: feature:3639636-3639686:1:exon

XP_032325823.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3620621-3620735:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3625162-3625258:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3626915-3627074:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3631257-3631346:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3634185-3634240:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3635561-3635648:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3636719-3636749:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3639081-3639214:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3639636-3639686:1:exon

LOC102510199
type: Gene
subclass of: SO_0000704
RO_0002162: 419612
gene: LOC102510199
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: 3622488..3625150
location: region:3622488-3625150:1
so has part: feature:3622488-3625150:1:exon

102510199
type: Gene
SIO_000068: ncbigene

position:3622488:1
position: 3622488
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3625150:1
position: 3625150
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3622488-3625150:1:exon

LOC102510199
type: Exon
subclass of: SO_0000147
RO_0002162: 419612
gene: LOC102510199
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 81% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC102510199
subclass of: SO_0000673
so part of: LOC102510199
location: 3622488..3625150
location: region:3622488-3625150:1
so has part: feature:3622488-3625150:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3622488-3625150:1:exon

WWP1
type: Gene
subclass of: SO_0000704
RO_0002162: 419612
gene: WWP1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(3645237..3731209)
location: region:3645237-3731209:-1
so has part: feature:3645237-3731209:-1:exon
subclass of: SO_0000010

102509478
type: Gene
SIO_000068: ncbigene

position:3645237:-1
position: 3645237
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3731209:-1
position: 3731209
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3645237-3731209:-1:exon

WWP1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 419612
gene: WWP1
product: WW domain containing E3 ubiquitin protein ligase 1, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 18 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 44 samples with support for all annotated introns
transcript id: XM_032469923.1
SIO_010081: WWP1
subclass of: SO_0000673
so part of: WWP1
location: complement(join(3645237..3646220,3651744..3651816,3652226..3652322,3654709..3654813,3659414..3659534,3660239..3660379,3660472..3660605,3664166..3664325,3668023..3668111,3670807..3670878,3670986..3671061,3673908..3674036,3674161..3674245,3674330..3674384,3676698..3676872,3678365..3678460,3685567..3685903,3691901..3692085,3694810..3694876,3694970..3695107,3698419..3698543,3699158..3699296,3703251..3703344,3710998..3711047))
location: region:3645237-3711047:-1
so has part: feature:3710998-3711047:-1:exon
so has part: feature:3703251-3703344:-1:exon
so has part: feature:3699158-3699296:-1:exon
so has part: feature:3698419-3698543:-1:exon
so has part: feature:3694970-3695107:-1:exon
so has part: feature:3694810-3694876:-1:exon
so has part: feature:3691901-3692085:-1:exon
so has part: feature:3685567-3685903:-1:exon
so has part: feature:3678365-3678460:-1:exon
so has part: feature:3676698-3676872:-1:exon
so has part: feature:3674330-3674384:-1:exon
so has part: feature:3674161-3674245:-1:exon
so has part: feature:3673908-3674036:-1:exon
so has part: feature:3670986-3671061:-1:exon
so has part: feature:3670807-3670878:-1:exon
so has part: feature:3668023-3668111:-1:exon
so has part: feature:3664166-3664325:-1:exon
so has part: feature:3660472-3660605:-1:exon
so has part: feature:3660239-3660379:-1:exon
so has part: feature:3659414-3659534:-1:exon
so has part: feature:3654709-3654813:-1:exon
so has part: feature:3652226-3652322:-1:exon
so has part: feature:3651744-3651816:-1:exon
so has part: feature:3645237-3646220:-1:exon

position:3711047:-1
position: 3711047
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3710998-3711047:-1:exon

position:3710998:-1
position: 3710998
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3703251-3703344:-1:exon

position:3703251:-1
position: 3703251
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3703344:-1
position: 3703344
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3699158-3699296:-1:exon

position:3699158:-1
position: 3699158
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3699296:-1
position: 3699296
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3698419-3698543:-1:exon

position:3698419:-1
position: 3698419
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3698543:-1
position: 3698543
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:3694970-3695107:-1:exon

position:3694970:-1
position: 3694970
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3695107:-1
position: 3695107
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:3694810-3694876:-1:exon

position:3694810:-1
position: 3694810
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3694876:-1
position: 3694876
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:3691901-3692085:-1:exon

position:3691901:-1
position: 3691901
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3692085:-1
position: 3692085
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:3685567-3685903:-1:exon

position:3685567:-1
position: 3685567
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3685903:-1
position: 3685903
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:3678365-3678460:-1:exon

position:3678365:-1
position: 3678365
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3678460:-1
position: 3678460
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:3676698-3676872:-1:exon

position:3676698:-1
position: 3676698
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3676872:-1
position: 3676872
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:3674330-3674384:-1:exon

position:3674330:-1
position: 3674330
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3674384:-1
position: 3674384
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:3674161-3674245:-1:exon

position:3674161:-1
position: 3674161
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3674245:-1
position: 3674245
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:3673908-3674036:-1:exon

position:3673908:-1
position: 3673908
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3674036:-1
position: 3674036
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:3670986-3671061:-1:exon

position:3670986:-1
position: 3670986
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3671061:-1
position: 3671061
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:3670807-3670878:-1:exon

position:3670807:-1
position: 3670807
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3670878:-1
position: 3670878
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:3668023-3668111:-1:exon

position:3668023:-1
position: 3668023
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3668111:-1
position: 3668111
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:3664166-3664325:-1:exon

position:3664166:-1
position: 3664166
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3664325:-1
position: 3664325
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:3660472-3660605:-1:exon

position:3660472:-1
position: 3660472
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3660605:-1
position: 3660605
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:3660239-3660379:-1:exon

position:3660239:-1
position: 3660239
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3660379:-1
position: 3660379
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:3659414-3659534:-1:exon

position:3659414:-1
position: 3659414
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3659534:-1
position: 3659534
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:3654709-3654813:-1:exon

position:3654709:-1
position: 3654709
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3654813:-1
position: 3654813
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:3652226-3652322:-1:exon

position:3652226:-1
position: 3652226
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3652322:-1
position: 3652322
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:3651744-3651816:-1:exon

position:3651744:-1
position: 3651744
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3651816:-1
position: 3651816
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:3645237-3646220:-1:exon

position:3646220:-1
position: 3646220
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

WWP1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 419612
gene: WWP1
product: WW domain containing E3 ubiquitin protein ligase 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 18 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 26 samples with support for all annotated introns
transcript id: XM_032469921.1
SIO_010081: WWP1
subclass of: SO_0000673
so part of: WWP1
location: complement(join(3645532..3646220,3651744..3651816,3652226..3652322,3654709..3654813,3659414..3659534,3660239..3660379,3660472..3660605,3664166..3664325,3668023..3668111,3670807..3670878,3670986..3671061,3673908..3674036,3674161..3674245,3674330..3674384,3676698..3676872,3678365..3678460,3685567..3685903,3691901..3692085,3694810..3694876,3694970..3695107,3698419..3698543,3699158..3699296,3703251..3703344,3710998..3711093,3714493..3714537,3731074..3731209))
location: region:3645532-3731209:-1
so has part: feature:3731074-3731209:-1:exon
so has part: feature:3714493-3714537:-1:exon
so has part: feature:3710998-3711093:-1:exon
so has part: feature:3703251-3703344:-1:exon
so has part: feature:3699158-3699296:-1:exon
so has part: feature:3698419-3698543:-1:exon
so has part: feature:3694970-3695107:-1:exon
so has part: feature:3694810-3694876:-1:exon
so has part: feature:3691901-3692085:-1:exon
so has part: feature:3685567-3685903:-1:exon
so has part: feature:3678365-3678460:-1:exon
so has part: feature:3676698-3676872:-1:exon
so has part: feature:3674330-3674384:-1:exon
so has part: feature:3674161-3674245:-1:exon
so has part: feature:3673908-3674036:-1:exon
so has part: feature:3670986-3671061:-1:exon
so has part: feature:3670807-3670878:-1:exon
so has part: feature:3668023-3668111:-1:exon
so has part: feature:3664166-3664325:-1:exon
so has part: feature:3660472-3660605:-1:exon
so has part: feature:3660239-3660379:-1:exon
so has part: feature:3659414-3659534:-1:exon
so has part: feature:3654709-3654813:-1:exon
so has part: feature:3652226-3652322:-1:exon
so has part: feature:3651744-3651816:-1:exon
so has part: feature:3645532-3646220:-1:exon

position:3645532:-1
position: 3645532
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3731074-3731209:-1:exon

position:3731074:-1
position: 3731074
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3714493-3714537:-1:exon

position:3714493:-1
position: 3714493
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3714537:-1
position: 3714537
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3710998-3711093:-1:exon

position:3711093:-1
position: 3711093
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3703251-3703344:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3699158-3699296:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3698419-3698543:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3694970-3695107:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3694810-3694876:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3691901-3692085:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3685567-3685903:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3678365-3678460:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3676698-3676872:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3674330-3674384:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:3674161-3674245:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:3673908-3674036:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:3670986-3671061:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:3670807-3670878:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:3668023-3668111:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:3664166-3664325:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:3660472-3660605:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:3660239-3660379:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:3659414-3659534:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:3654709-3654813:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:3652226-3652322:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:3651744-3651816:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:3645532-3646220:-1:exon

WWP1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 419612
gene: WWP1
product: WW domain containing E3 ubiquitin protein ligase 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 18 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 38 samples with support for all annotated introns
transcript id: XM_032469920.1
SIO_010081: WWP1
subclass of: SO_0000673
so part of: WWP1
location: complement(join(3645532..3646220,3651744..3651816,3652226..3652322,3654709..3654813,3659414..3659534,3660239..3660379,3660472..3660605,3664166..3664325,3668023..3668111,3670807..3670878,3670986..3671061,3673908..3674036,3674161..3674245,3674330..3674384,3676698..3676872,3678365..3678460,3685567..3685903,3691901..3692085,3694810..3694876,3694970..3695107,3698419..3698543,3699158..3699296,3703251..3703344,3710998..3711093,3731074..3731207))
location: region:3645532-3731207:-1
so has part: feature:3731074-3731207:-1:exon
so has part: feature:3710998-3711093:-1:exon
so has part: feature:3703251-3703344:-1:exon
so has part: feature:3699158-3699296:-1:exon
so has part: feature:3698419-3698543:-1:exon
so has part: feature:3694970-3695107:-1:exon
so has part: feature:3694810-3694876:-1:exon
so has part: feature:3691901-3692085:-1:exon
so has part: feature:3685567-3685903:-1:exon
so has part: feature:3678365-3678460:-1:exon
so has part: feature:3676698-3676872:-1:exon
so has part: feature:3674330-3674384:-1:exon
so has part: feature:3674161-3674245:-1:exon
so has part: feature:3673908-3674036:-1:exon
so has part: feature:3670986-3671061:-1:exon
so has part: feature:3670807-3670878:-1:exon
so has part: feature:3668023-3668111:-1:exon
so has part: feature:3664166-3664325:-1:exon
so has part: feature:3660472-3660605:-1:exon
so has part: feature:3660239-3660379:-1:exon
so has part: feature:3659414-3659534:-1:exon
so has part: feature:3654709-3654813:-1:exon
so has part: feature:3652226-3652322:-1:exon
so has part: feature:3651744-3651816:-1:exon
so has part: feature:3645532-3646220:-1:exon

position:3731207:-1
position: 3731207
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3731074-3731207:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3710998-3711093:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3703251-3703344:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3699158-3699296:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3698419-3698543:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3694970-3695107:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3694810-3694876:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3691901-3692085:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3685567-3685903:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3678365-3678460:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3676698-3676872:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3674330-3674384:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3674161-3674245:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:3673908-3674036:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:3670986-3671061:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:3670807-3670878:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:3668023-3668111:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:3664166-3664325:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:3660472-3660605:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:3660239-3660379:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:3659414-3659534:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:3654709-3654813:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:3652226-3652322:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:3651744-3651816:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:3645532-3646220:-1:exon

WWP1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 419612
gene: WWP1
product: WW domain containing E3 ubiquitin protein ligase 1, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 18 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 16 samples with support for all annotated introns
transcript id: XM_032469922.1
SIO_010081: WWP1
subclass of: SO_0000673
so part of: WWP1
location: complement(join(3645532..3646220,3651744..3651816,3652226..3652322,3654709..3654813,3659414..3659534,3660239..3660379,3660472..3660605,3664166..3664325,3668023..3668111,3670807..3670878,3670986..3671061,3673908..3674036,3674161..3674245,3674330..3674384,3676698..3676872,3678365..3678460,3685567..3685903,3691901..3692085,3694810..3694876,3694970..3695107,3698419..3698543,3699158..3699296,3703251..3703344,3710998..3711093,3714493..3714537,3727003..3727087))
location: region:3645532-3727087:-1
so has part: feature:3727003-3727087:-1:exon
so has part: feature:3714493-3714537:-1:exon
so has part: feature:3710998-3711093:-1:exon
so has part: feature:3703251-3703344:-1:exon
so has part: feature:3699158-3699296:-1:exon
so has part: feature:3698419-3698543:-1:exon
so has part: feature:3694970-3695107:-1:exon
so has part: feature:3694810-3694876:-1:exon
so has part: feature:3691901-3692085:-1:exon
so has part: feature:3685567-3685903:-1:exon
so has part: feature:3678365-3678460:-1:exon
so has part: feature:3676698-3676872:-1:exon
so has part: feature:3674330-3674384:-1:exon
so has part: feature:3674161-3674245:-1:exon
so has part: feature:3673908-3674036:-1:exon
so has part: feature:3670986-3671061:-1:exon
so has part: feature:3670807-3670878:-1:exon
so has part: feature:3668023-3668111:-1:exon
so has part: feature:3664166-3664325:-1:exon
so has part: feature:3660472-3660605:-1:exon
so has part: feature:3660239-3660379:-1:exon
so has part: feature:3659414-3659534:-1:exon
so has part: feature:3654709-3654813:-1:exon
so has part: feature:3652226-3652322:-1:exon
so has part: feature:3651744-3651816:-1:exon
so has part: feature:3645532-3646220:-1:exon

position:3727087:-1
position: 3727087
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3727003-3727087:-1:exon

position:3727003:-1
position: 3727003
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3714493-3714537:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3710998-3711093:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3703251-3703344:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3699158-3699296:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3698419-3698543:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3694970-3695107:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3694810-3694876:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3691901-3692085:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3685567-3685903:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3678365-3678460:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3676698-3676872:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3674330-3674384:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:3674161-3674245:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:3673908-3674036:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:3670986-3671061:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:3670807-3670878:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:3668023-3668111:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:3664166-3664325:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:3660472-3660605:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:3660239-3660379:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:3659414-3659534:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:3654709-3654813:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:3652226-3652322:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:3651744-3651816:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:3645532-3646220:-1:exon

WWP1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 419612
gene: WWP1
product: WW domain containing E3 ubiquitin protein ligase 1, transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 37 samples with support for all annotated introns
transcript id: XM_032469927.1
SIO_010081: WWP1
subclass of: SO_0000673
so part of: WWP1
location: complement(join(3646121..3646220,3651744..3651816,3652226..3652322,3654709..3654813,3659414..3659534,3660239..3660379,3660472..3660605,3664166..3664325,3668023..3668111,3670807..3670878,3670986..3671061,3673908..3674036,3674161..3674245,3674330..3674384,3676698..3676872,3678365..3678460,3685567..3685903,3691901..3692085,3694810..3694873,3694970..3695107,3698419..3698543,3699158..3699296,3703251..3703344,3710998..3711093,3731074..3731207))
location: region:3646121-3731207:-1
so has part: feature:3731074-3731207:-1:exon
so has part: feature:3710998-3711093:-1:exon
so has part: feature:3703251-3703344:-1:exon
so has part: feature:3699158-3699296:-1:exon
so has part: feature:3698419-3698543:-1:exon
so has part: feature:3694970-3695107:-1:exon
so has part: feature:3694810-3694873:-1:exon
so has part: feature:3691901-3692085:-1:exon
so has part: feature:3685567-3685903:-1:exon
so has part: feature:3678365-3678460:-1:exon
so has part: feature:3676698-3676872:-1:exon
so has part: feature:3674330-3674384:-1:exon
so has part: feature:3674161-3674245:-1:exon
so has part: feature:3673908-3674036:-1:exon
so has part: feature:3670986-3671061:-1:exon
so has part: feature:3670807-3670878:-1:exon
so has part: feature:3668023-3668111:-1:exon
so has part: feature:3664166-3664325:-1:exon
so has part: feature:3660472-3660605:-1:exon
so has part: feature:3660239-3660379:-1:exon
so has part: feature:3659414-3659534:-1:exon
so has part: feature:3654709-3654813:-1:exon
so has part: feature:3652226-3652322:-1:exon
so has part: feature:3651744-3651816:-1:exon
so has part: feature:3646121-3646220:-1:exon

position:3646121:-1
position: 3646121
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3731074-3731207:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3710998-3711093:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3703251-3703344:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3699158-3699296:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3698419-3698543:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3694970-3695107:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3694810-3694873:-1:exon

position:3694873:-1
position: 3694873
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:3691901-3692085:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3685567-3685903:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3678365-3678460:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3676698-3676872:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3674330-3674384:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3674161-3674245:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:3673908-3674036:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:3670986-3671061:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:3670807-3670878:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:3668023-3668111:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:3664166-3664325:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:3660472-3660605:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:3660239-3660379:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:3659414-3659534:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:3654709-3654813:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:3652226-3652322:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:3651744-3651816:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:3646121-3646220:-1:exon

WWP1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 419612
gene: WWP1
product: WW domain containing E3 ubiquitin protein ligase 1, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 18 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 28 samples with support for all annotated introns
transcript id: XM_032469924.1
SIO_010081: WWP1
subclass of: SO_0000673
so part of: WWP1
location: complement(join(3646121..3646220,3651744..3651816,3652226..3652322,3654709..3654813,3659414..3659534,3660239..3660379,3660472..3660605,3664166..3664325,3668023..3668111,3670807..3670878,3670986..3671061,3673908..3674036,3674161..3674245,3674330..3674384,3676698..3676872,3678365..3678460,3685567..3685903,3691901..3692085,3694810..3694876,3694970..3695107,3698419..3698543,3699158..3699296,3703251..3703344,3731074..3731205))
location: region:3646121-3731205:-1
so has part: feature:3731074-3731205:-1:exon
so has part: feature:3703251-3703344:-1:exon
so has part: feature:3699158-3699296:-1:exon
so has part: feature:3698419-3698543:-1:exon
so has part: feature:3694970-3695107:-1:exon
so has part: feature:3694810-3694876:-1:exon
so has part: feature:3691901-3692085:-1:exon
so has part: feature:3685567-3685903:-1:exon
so has part: feature:3678365-3678460:-1:exon
so has part: feature:3676698-3676872:-1:exon
so has part: feature:3674330-3674384:-1:exon
so has part: feature:3674161-3674245:-1:exon
so has part: feature:3673908-3674036:-1:exon
so has part: feature:3670986-3671061:-1:exon
so has part: feature:3670807-3670878:-1:exon
so has part: feature:3668023-3668111:-1:exon
so has part: feature:3664166-3664325:-1:exon
so has part: feature:3660472-3660605:-1:exon
so has part: feature:3660239-3660379:-1:exon
so has part: feature:3659414-3659534:-1:exon
so has part: feature:3654709-3654813:-1:exon
so has part: feature:3652226-3652322:-1:exon
so has part: feature:3651744-3651816:-1:exon
so has part: feature:3646121-3646220:-1:exon

position:3731205:-1
position: 3731205
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3731074-3731205:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3703251-3703344:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3699158-3699296:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3698419-3698543:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3694970-3695107:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3694810-3694876:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3691901-3692085:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3685567-3685903:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3678365-3678460:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3676698-3676872:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3674330-3674384:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3674161-3674245:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3673908-3674036:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:3670986-3671061:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:3670807-3670878:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:3668023-3668111:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:3664166-3664325:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:3660472-3660605:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:3660239-3660379:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:3659414-3659534:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:3654709-3654813:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:3652226-3652322:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:3651744-3651816:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:3646121-3646220:-1:exon

WWP1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 419612
gene: WWP1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: NEDD4-like E3 ubiquitin-protein ligase WWP1 isoform X2
translation: MATASPRSDTSNGNHSGRLQLQVTVSSAKLKRKKNWFGTAIYTEVVVDGESKKTAKSSSSSNPKWDEQLTINVTPQTTLEFRVWSHHTLKADALLGRATIDLKQALLVHNRKLERVKEQLKLSLETKNGVVQTGELTVVLDGLVIEQENITNCSSSPAKIQQNGDALHENGEPSARTATRLAAEGTNGVDNHVPTGTVVQNSCCSYVVNGDSAPSSPSQVAARPKNTPAPKPLTSEPANDTVNGESSSSAPTGDASTAGTAGVAEETALSSNCISTAVEDPPVQEILASSENSECIHPNGAAFGSEARSALDPSTSNSGSSSASEAAKLRQPEGSVEPMRPQSANASTETLPSGWEQRKDPHGRTYYVDHNTRTTTWERPQPLPPGWERRVDDRGRVYYVDHNTRTTTWQRPTMESVRNFEQWQSQRSQLQGAMQQFNQRYLYSASMLAAENDPYGPLPPGWEKRVDSTDRVYFVNHNTKTTQWEDPRTQGLQNEEPLPEGWEIRYTREGVRYFVDHNTRTTTFKDPRNGKSSVTKGGPQIAYERSFRWKLAHFRYLCQSNALPSHVKINVSRQTLFEDSFQQIMALKPYDLRRRLYVIFRGEEGLDYGGLAREWFFLLSHEVLNPMYCLFEYAGKNNYCLQINPASTINPDHLSYFCFIGRFIAMALFHGKFIDTGFSLPFYKRMLSKKLTIKDLESIDTEFYNSLIWIRDNNIEECGLEMYFSVDMEILGKVTSHDLKLGGSNILVTEENKDEYIGLMTEWRFSRGVQEQTKAFLDGFNEVVPLQWLQYFDEKELEVMLCGMQEVDLADWQRNTVYRHYTRNSKQIIWFWQFVKETDNEVRMRLLQFVTGTCRLPLGGFAELMGSNGPQKFCVEKVGKDTWLPRSHTCFNRLDLPPYKSYEQLKEKLLFAIEETEGFGQE
SIO_010081: WWP1
subclass of: SO_0000673
so part of: WWP1
location: complement(join(3646121..3646220,3651744..3651816,3652226..3652322,3654709..3654813,3659414..3659534,3660239..3660379,3660472..3660605,3664166..3664325,3668023..3668111,3670807..3670878,3670986..3671061,3673908..3674036,3674161..3674245,3674330..3674384,3676698..3676872,3678365..3678460,3685567..3685903,3691901..3692085,3694810..3694873,3694970..3695107,3698419..3698543,3699158..3699296,3703251..3703323))
location: region:3646121-3703323:-1
so has part: feature:3703251-3703323:-1:exon
so has part: feature:3699158-3699296:-1:exon
so has part: feature:3698419-3698543:-1:exon
so has part: feature:3694970-3695107:-1:exon
so has part: feature:3694810-3694873:-1:exon
so has part: feature:3691901-3692085:-1:exon
so has part: feature:3685567-3685903:-1:exon
so has part: feature:3678365-3678460:-1:exon
so has part: feature:3676698-3676872:-1:exon
so has part: feature:3674330-3674384:-1:exon
so has part: feature:3674161-3674245:-1:exon
so has part: feature:3673908-3674036:-1:exon
so has part: feature:3670986-3671061:-1:exon
so has part: feature:3670807-3670878:-1:exon
so has part: feature:3668023-3668111:-1:exon
so has part: feature:3664166-3664325:-1:exon
so has part: feature:3660472-3660605:-1:exon
so has part: feature:3660239-3660379:-1:exon
so has part: feature:3659414-3659534:-1:exon
so has part: feature:3654709-3654813:-1:exon
so has part: feature:3652226-3652322:-1:exon
so has part: feature:3651744-3651816:-1:exon
so has part: feature:3646121-3646220:-1:exon

XP_032325818.1
type: Protein
SIO_000068: ncbiprotein

position:3703323:-1
position: 3703323
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3703251-3703323:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3699158-3699296:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3698419-3698543:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3694970-3695107:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3694810-3694873:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3691901-3692085:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3685567-3685903:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3678365-3678460:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3676698-3676872:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3674330-3674384:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3674161-3674245:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3673908-3674036:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3670986-3671061:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:3670807-3670878:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:3668023-3668111:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:3664166-3664325:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:3660472-3660605:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:3660239-3660379:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:3659414-3659534:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:3654709-3654813:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:3652226-3652322:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:3651744-3651816:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:3646121-3646220:-1:exon

WWP1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 419612
gene: WWP1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: NEDD4-like E3 ubiquitin-protein ligase WWP1 isoform X1
translation: MATASPRSDTSNGNHSGRLQLQVTVSSAKLKRKKNWFGTAIYTEVVVDGESKKTAKSSSSSNPKWDEQLTINVTPQTTLEFRVWSHHTLKADALLGRATIDLKQALLVHNRKLERVKEQLKLSLETKNGVVQTGELTVVLDGLVIEQENITNCSSSPAIEIQQNGDALHENGEPSARTATRLAAEGTNGVDNHVPTGTVVQNSCCSYVVNGDSAPSSPSQVAARPKNTPAPKPLTSEPANDTVNGESSSSAPTGDASTAGTAGVAEETALSSNCISTAVEDPPVQEILASSENSECIHPNGAAFGSEARSALDPSTSNSGSSSASEAAKLRQPEGSVEPMRPQSANASTETLPSGWEQRKDPHGRTYYVDHNTRTTTWERPQPLPPGWERRVDDRGRVYYVDHNTRTTTWQRPTMESVRNFEQWQSQRSQLQGAMQQFNQRYLYSASMLAAENDPYGPLPPGWEKRVDSTDRVYFVNHNTKTTQWEDPRTQGLQNEEPLPEGWEIRYTREGVRYFVDHNTRTTTFKDPRNGKSSVTKGGPQIAYERSFRWKLAHFRYLCQSNALPSHVKINVSRQTLFEDSFQQIMALKPYDLRRRLYVIFRGEEGLDYGGLAREWFFLLSHEVLNPMYCLFEYAGKNNYCLQINPASTINPDHLSYFCFIGRFIAMALFHGKFIDTGFSLPFYKRMLSKKLTIKDLESIDTEFYNSLIWIRDNNIEECGLEMYFSVDMEILGKVTSHDLKLGGSNILVTEENKDEYIGLMTEWRFSRGVQEQTKAFLDGFNEVVPLQWLQYFDEKELEVMLCGMQEVDLADWQRNTVYRHYTRNSKQIIWFWQFVKETDNEVRMRLLQFVTGTCRLPLGGFAELMGSNGPQKFCVEKVGKDTWLPRSHTCFNRLDLPPYKSYEQLKEKLLFAIEETEGFGQE
SIO_010081: WWP1
subclass of: SO_0000673
so part of: WWP1
location: complement(join(3646121..3646220,3651744..3651816,3652226..3652322,3654709..3654813,3659414..3659534,3660239..3660379,3660472..3660605,3664166..3664325,3668023..3668111,3670807..3670878,3670986..3671061,3673908..3674036,3674161..3674245,3674330..3674384,3676698..3676872,3678365..3678460,3685567..3685903,3691901..3692085,3694810..3694876,3694970..3695107,3698419..3698543,3699158..3699296,3703251..3703323))
location: region:3646121-3703323:-1
so has part: feature:3703251-3703323:-1:exon
so has part: feature:3699158-3699296:-1:exon
so has part: feature:3698419-3698543:-1:exon
so has part: feature:3694970-3695107:-1:exon
so has part: feature:3694810-3694876:-1:exon
so has part: feature:3691901-3692085:-1:exon
so has part: feature:3685567-3685903:-1:exon
so has part: feature:3678365-3678460:-1:exon
so has part: feature:3676698-3676872:-1:exon
so has part: feature:3674330-3674384:-1:exon
so has part: feature:3674161-3674245:-1:exon
so has part: feature:3673908-3674036:-1:exon
so has part: feature:3670986-3671061:-1:exon
so has part: feature:3670807-3670878:-1:exon
so has part: feature:3668023-3668111:-1:exon
so has part: feature:3664166-3664325:-1:exon
so has part: feature:3660472-3660605:-1:exon
so has part: feature:3660239-3660379:-1:exon
so has part: feature:3659414-3659534:-1:exon
so has part: feature:3654709-3654813:-1:exon
so has part: feature:3652226-3652322:-1:exon
so has part: feature:3651744-3651816:-1:exon
so has part: feature:3646121-3646220:-1:exon

XP_032325811.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3703251-3703323:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3699158-3699296:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3698419-3698543:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3694970-3695107:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3694810-3694876:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3691901-3692085:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3685567-3685903:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3678365-3678460:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3676698-3676872:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3674330-3674384:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3674161-3674245:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3673908-3674036:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3670986-3671061:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:3670807-3670878:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:3668023-3668111:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:3664166-3664325:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:3660472-3660605:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:3660239-3660379:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:3659414-3659534:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:3654709-3654813:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:3652226-3652322:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:3651744-3651816:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:3646121-3646220:-1:exon

WWP1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 419612
gene: WWP1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: NEDD4-like E3 ubiquitin-protein ligase WWP1 isoform X1
translation: MATASPRSDTSNGNHSGRLQLQVTVSSAKLKRKKNWFGTAIYTEVVVDGESKKTAKSSSSSNPKWDEQLTINVTPQTTLEFRVWSHHTLKADALLGRATIDLKQALLVHNRKLERVKEQLKLSLETKNGVVQTGELTVVLDGLVIEQENITNCSSSPAIEIQQNGDALHENGEPSARTATRLAAEGTNGVDNHVPTGTVVQNSCCSYVVNGDSAPSSPSQVAARPKNTPAPKPLTSEPANDTVNGESSSSAPTGDASTAGTAGVAEETALSSNCISTAVEDPPVQEILASSENSECIHPNGAAFGSEARSALDPSTSNSGSSSASEAAKLRQPEGSVEPMRPQSANASTETLPSGWEQRKDPHGRTYYVDHNTRTTTWERPQPLPPGWERRVDDRGRVYYVDHNTRTTTWQRPTMESVRNFEQWQSQRSQLQGAMQQFNQRYLYSASMLAAENDPYGPLPPGWEKRVDSTDRVYFVNHNTKTTQWEDPRTQGLQNEEPLPEGWEIRYTREGVRYFVDHNTRTTTFKDPRNGKSSVTKGGPQIAYERSFRWKLAHFRYLCQSNALPSHVKINVSRQTLFEDSFQQIMALKPYDLRRRLYVIFRGEEGLDYGGLAREWFFLLSHEVLNPMYCLFEYAGKNNYCLQINPASTINPDHLSYFCFIGRFIAMALFHGKFIDTGFSLPFYKRMLSKKLTIKDLESIDTEFYNSLIWIRDNNIEECGLEMYFSVDMEILGKVTSHDLKLGGSNILVTEENKDEYIGLMTEWRFSRGVQEQTKAFLDGFNEVVPLQWLQYFDEKELEVMLCGMQEVDLADWQRNTVYRHYTRNSKQIIWFWQFVKETDNEVRMRLLQFVTGTCRLPLGGFAELMGSNGPQKFCVEKVGKDTWLPRSHTCFNRLDLPPYKSYEQLKEKLLFAIEETEGFGQE
SIO_010081: WWP1
subclass of: SO_0000673
so part of: WWP1
location: complement(join(3646121..3646220,3651744..3651816,3652226..3652322,3654709..3654813,3659414..3659534,3660239..3660379,3660472..3660605,3664166..3664325,3668023..3668111,3670807..3670878,3670986..3671061,3673908..3674036,3674161..3674245,3674330..3674384,3676698..3676872,3678365..3678460,3685567..3685903,3691901..3692085,3694810..3694876,3694970..3695107,3698419..3698543,3699158..3699296,3703251..3703323))
location: region:3646121-3703323:-1
so has part: feature:3703251-3703323:-1:exon
so has part: feature:3699158-3699296:-1:exon
so has part: feature:3698419-3698543:-1:exon
so has part: feature:3694970-3695107:-1:exon
so has part: feature:3694810-3694876:-1:exon
so has part: feature:3691901-3692085:-1:exon
so has part: feature:3685567-3685903:-1:exon
so has part: feature:3678365-3678460:-1:exon
so has part: feature:3676698-3676872:-1:exon
so has part: feature:3674330-3674384:-1:exon
so has part: feature:3674161-3674245:-1:exon
so has part: feature:3673908-3674036:-1:exon
so has part: feature:3670986-3671061:-1:exon
so has part: feature:3670807-3670878:-1:exon
so has part: feature:3668023-3668111:-1:exon
so has part: feature:3664166-3664325:-1:exon
so has part: feature:3660472-3660605:-1:exon
so has part: feature:3660239-3660379:-1:exon
so has part: feature:3659414-3659534:-1:exon
so has part: feature:3654709-3654813:-1:exon
so has part: feature:3652226-3652322:-1:exon
so has part: feature:3651744-3651816:-1:exon
so has part: feature:3646121-3646220:-1:exon

XP_032325812.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3703251-3703323:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3699158-3699296:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3698419-3698543:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3694970-3695107:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3694810-3694876:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3691901-3692085:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3685567-3685903:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3678365-3678460:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3676698-3676872:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3674330-3674384:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3674161-3674245:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3673908-3674036:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3670986-3671061:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:3670807-3670878:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:3668023-3668111:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:3664166-3664325:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:3660472-3660605:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:3660239-3660379:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:3659414-3659534:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:3654709-3654813:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:3652226-3652322:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:3651744-3651816:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:3646121-3646220:-1:exon

WWP1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 419612
gene: WWP1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: NEDD4-like E3 ubiquitin-protein ligase WWP1 isoform X1
translation: MATASPRSDTSNGNHSGRLQLQVTVSSAKLKRKKNWFGTAIYTEVVVDGESKKTAKSSSSSNPKWDEQLTINVTPQTTLEFRVWSHHTLKADALLGRATIDLKQALLVHNRKLERVKEQLKLSLETKNGVVQTGELTVVLDGLVIEQENITNCSSSPAIEIQQNGDALHENGEPSARTATRLAAEGTNGVDNHVPTGTVVQNSCCSYVVNGDSAPSSPSQVAARPKNTPAPKPLTSEPANDTVNGESSSSAPTGDASTAGTAGVAEETALSSNCISTAVEDPPVQEILASSENSECIHPNGAAFGSEARSALDPSTSNSGSSSASEAAKLRQPEGSVEPMRPQSANASTETLPSGWEQRKDPHGRTYYVDHNTRTTTWERPQPLPPGWERRVDDRGRVYYVDHNTRTTTWQRPTMESVRNFEQWQSQRSQLQGAMQQFNQRYLYSASMLAAENDPYGPLPPGWEKRVDSTDRVYFVNHNTKTTQWEDPRTQGLQNEEPLPEGWEIRYTREGVRYFVDHNTRTTTFKDPRNGKSSVTKGGPQIAYERSFRWKLAHFRYLCQSNALPSHVKINVSRQTLFEDSFQQIMALKPYDLRRRLYVIFRGEEGLDYGGLAREWFFLLSHEVLNPMYCLFEYAGKNNYCLQINPASTINPDHLSYFCFIGRFIAMALFHGKFIDTGFSLPFYKRMLSKKLTIKDLESIDTEFYNSLIWIRDNNIEECGLEMYFSVDMEILGKVTSHDLKLGGSNILVTEENKDEYIGLMTEWRFSRGVQEQTKAFLDGFNEVVPLQWLQYFDEKELEVMLCGMQEVDLADWQRNTVYRHYTRNSKQIIWFWQFVKETDNEVRMRLLQFVTGTCRLPLGGFAELMGSNGPQKFCVEKVGKDTWLPRSHTCFNRLDLPPYKSYEQLKEKLLFAIEETEGFGQE
SIO_010081: WWP1
subclass of: SO_0000673
so part of: WWP1
location: complement(join(3646121..3646220,3651744..3651816,3652226..3652322,3654709..3654813,3659414..3659534,3660239..3660379,3660472..3660605,3664166..3664325,3668023..3668111,3670807..3670878,3670986..3671061,3673908..3674036,3674161..3674245,3674330..3674384,3676698..3676872,3678365..3678460,3685567..3685903,3691901..3692085,3694810..3694876,3694970..3695107,3698419..3698543,3699158..3699296,3703251..3703323))
location: region:3646121-3703323:-1
so has part: feature:3703251-3703323:-1:exon
so has part: feature:3699158-3699296:-1:exon
so has part: feature:3698419-3698543:-1:exon
so has part: feature:3694970-3695107:-1:exon
so has part: feature:3694810-3694876:-1:exon
so has part: feature:3691901-3692085:-1:exon
so has part: feature:3685567-3685903:-1:exon
so has part: feature:3678365-3678460:-1:exon
so has part: feature:3676698-3676872:-1:exon
so has part: feature:3674330-3674384:-1:exon
so has part: feature:3674161-3674245:-1:exon
so has part: feature:3673908-3674036:-1:exon
so has part: feature:3670986-3671061:-1:exon
so has part: feature:3670807-3670878:-1:exon
so has part: feature:3668023-3668111:-1:exon
so has part: feature:3664166-3664325:-1:exon
so has part: feature:3660472-3660605:-1:exon
so has part: feature:3660239-3660379:-1:exon
so has part: feature:3659414-3659534:-1:exon
so has part: feature:3654709-3654813:-1:exon
so has part: feature:3652226-3652322:-1:exon
so has part: feature:3651744-3651816:-1:exon
so has part: feature:3646121-3646220:-1:exon

XP_032325813.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3703251-3703323:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3699158-3699296:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3698419-3698543:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3694970-3695107:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3694810-3694876:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3691901-3692085:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3685567-3685903:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3678365-3678460:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3676698-3676872:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3674330-3674384:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3674161-3674245:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3673908-3674036:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3670986-3671061:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:3670807-3670878:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:3668023-3668111:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:3664166-3664325:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:3660472-3660605:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:3660239-3660379:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:3659414-3659534:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:3654709-3654813:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:3652226-3652322:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:3651744-3651816:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:3646121-3646220:-1:exon

WWP1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 419612
gene: WWP1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: NEDD4-like E3 ubiquitin-protein ligase WWP1 isoform X1
translation: MATASPRSDTSNGNHSGRLQLQVTVSSAKLKRKKNWFGTAIYTEVVVDGESKKTAKSSSSSNPKWDEQLTINVTPQTTLEFRVWSHHTLKADALLGRATIDLKQALLVHNRKLERVKEQLKLSLETKNGVVQTGELTVVLDGLVIEQENITNCSSSPAIEIQQNGDALHENGEPSARTATRLAAEGTNGVDNHVPTGTVVQNSCCSYVVNGDSAPSSPSQVAARPKNTPAPKPLTSEPANDTVNGESSSSAPTGDASTAGTAGVAEETALSSNCISTAVEDPPVQEILASSENSECIHPNGAAFGSEARSALDPSTSNSGSSSASEAAKLRQPEGSVEPMRPQSANASTETLPSGWEQRKDPHGRTYYVDHNTRTTTWERPQPLPPGWERRVDDRGRVYYVDHNTRTTTWQRPTMESVRNFEQWQSQRSQLQGAMQQFNQRYLYSASMLAAENDPYGPLPPGWEKRVDSTDRVYFVNHNTKTTQWEDPRTQGLQNEEPLPEGWEIRYTREGVRYFVDHNTRTTTFKDPRNGKSSVTKGGPQIAYERSFRWKLAHFRYLCQSNALPSHVKINVSRQTLFEDSFQQIMALKPYDLRRRLYVIFRGEEGLDYGGLAREWFFLLSHEVLNPMYCLFEYAGKNNYCLQINPASTINPDHLSYFCFIGRFIAMALFHGKFIDTGFSLPFYKRMLSKKLTIKDLESIDTEFYNSLIWIRDNNIEECGLEMYFSVDMEILGKVTSHDLKLGGSNILVTEENKDEYIGLMTEWRFSRGVQEQTKAFLDGFNEVVPLQWLQYFDEKELEVMLCGMQEVDLADWQRNTVYRHYTRNSKQIIWFWQFVKETDNEVRMRLLQFVTGTCRLPLGGFAELMGSNGPQKFCVEKVGKDTWLPRSHTCFNRLDLPPYKSYEQLKEKLLFAIEETEGFGQE
SIO_010081: WWP1
subclass of: SO_0000673
so part of: WWP1
location: complement(join(3646121..3646220,3651744..3651816,3652226..3652322,3654709..3654813,3659414..3659534,3660239..3660379,3660472..3660605,3664166..3664325,3668023..3668111,3670807..3670878,3670986..3671061,3673908..3674036,3674161..3674245,3674330..3674384,3676698..3676872,3678365..3678460,3685567..3685903,3691901..3692085,3694810..3694876,3694970..3695107,3698419..3698543,3699158..3699296,3703251..3703323))
location: region:3646121-3703323:-1
so has part: feature:3703251-3703323:-1:exon
so has part: feature:3699158-3699296:-1:exon
so has part: feature:3698419-3698543:-1:exon
so has part: feature:3694970-3695107:-1:exon
so has part: feature:3694810-3694876:-1:exon
so has part: feature:3691901-3692085:-1:exon
so has part: feature:3685567-3685903:-1:exon
so has part: feature:3678365-3678460:-1:exon
so has part: feature:3676698-3676872:-1:exon
so has part: feature:3674330-3674384:-1:exon
so has part: feature:3674161-3674245:-1:exon
so has part: feature:3673908-3674036:-1:exon
so has part: feature:3670986-3671061:-1:exon
so has part: feature:3670807-3670878:-1:exon
so has part: feature:3668023-3668111:-1:exon
so has part: feature:3664166-3664325:-1:exon
so has part: feature:3660472-3660605:-1:exon
so has part: feature:3660239-3660379:-1:exon
so has part: feature:3659414-3659534:-1:exon
so has part: feature:3654709-3654813:-1:exon
so has part: feature:3652226-3652322:-1:exon
so has part: feature:3651744-3651816:-1:exon
so has part: feature:3646121-3646220:-1:exon

XP_032325814.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3703251-3703323:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3699158-3699296:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3698419-3698543:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3694970-3695107:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3694810-3694876:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3691901-3692085:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3685567-3685903:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3678365-3678460:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3676698-3676872:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3674330-3674384:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3674161-3674245:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3673908-3674036:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3670986-3671061:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:3670807-3670878:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:3668023-3668111:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:3664166-3664325:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:3660472-3660605:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:3660239-3660379:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:3659414-3659534:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:3654709-3654813:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:3652226-3652322:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:3651744-3651816:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:3646121-3646220:-1:exon

WWP1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 419612
gene: WWP1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: NEDD4-like E3 ubiquitin-protein ligase WWP1 isoform X1
translation: MATASPRSDTSNGNHSGRLQLQVTVSSAKLKRKKNWFGTAIYTEVVVDGESKKTAKSSSSSNPKWDEQLTINVTPQTTLEFRVWSHHTLKADALLGRATIDLKQALLVHNRKLERVKEQLKLSLETKNGVVQTGELTVVLDGLVIEQENITNCSSSPAIEIQQNGDALHENGEPSARTATRLAAEGTNGVDNHVPTGTVVQNSCCSYVVNGDSAPSSPSQVAARPKNTPAPKPLTSEPANDTVNGESSSSAPTGDASTAGTAGVAEETALSSNCISTAVEDPPVQEILASSENSECIHPNGAAFGSEARSALDPSTSNSGSSSASEAAKLRQPEGSVEPMRPQSANASTETLPSGWEQRKDPHGRTYYVDHNTRTTTWERPQPLPPGWERRVDDRGRVYYVDHNTRTTTWQRPTMESVRNFEQWQSQRSQLQGAMQQFNQRYLYSASMLAAENDPYGPLPPGWEKRVDSTDRVYFVNHNTKTTQWEDPRTQGLQNEEPLPEGWEIRYTREGVRYFVDHNTRTTTFKDPRNGKSSVTKGGPQIAYERSFRWKLAHFRYLCQSNALPSHVKINVSRQTLFEDSFQQIMALKPYDLRRRLYVIFRGEEGLDYGGLAREWFFLLSHEVLNPMYCLFEYAGKNNYCLQINPASTINPDHLSYFCFIGRFIAMALFHGKFIDTGFSLPFYKRMLSKKLTIKDLESIDTEFYNSLIWIRDNNIEECGLEMYFSVDMEILGKVTSHDLKLGGSNILVTEENKDEYIGLMTEWRFSRGVQEQTKAFLDGFNEVVPLQWLQYFDEKELEVMLCGMQEVDLADWQRNTVYRHYTRNSKQIIWFWQFVKETDNEVRMRLLQFVTGTCRLPLGGFAELMGSNGPQKFCVEKVGKDTWLPRSHTCFNRLDLPPYKSYEQLKEKLLFAIEETEGFGQE
SIO_010081: WWP1
subclass of: SO_0000673
so part of: WWP1
location: complement(join(3646121..3646220,3651744..3651816,3652226..3652322,3654709..3654813,3659414..3659534,3660239..3660379,3660472..3660605,3664166..3664325,3668023..3668111,3670807..3670878,3670986..3671061,3673908..3674036,3674161..3674245,3674330..3674384,3676698..3676872,3678365..3678460,3685567..3685903,3691901..3692085,3694810..3694876,3694970..3695107,3698419..3698543,3699158..3699296,3703251..3703323))
location: region:3646121-3703323:-1
so has part: feature:3703251-3703323:-1:exon
so has part: feature:3699158-3699296:-1:exon
so has part: feature:3698419-3698543:-1:exon
so has part: feature:3694970-3695107:-1:exon
so has part: feature:3694810-3694876:-1:exon
so has part: feature:3691901-3692085:-1:exon
so has part: feature:3685567-3685903:-1:exon
so has part: feature:3678365-3678460:-1:exon
so has part: feature:3676698-3676872:-1:exon
so has part: feature:3674330-3674384:-1:exon
so has part: feature:3674161-3674245:-1:exon
so has part: feature:3673908-3674036:-1:exon
so has part: feature:3670986-3671061:-1:exon
so has part: feature:3670807-3670878:-1:exon
so has part: feature:3668023-3668111:-1:exon
so has part: feature:3664166-3664325:-1:exon
so has part: feature:3660472-3660605:-1:exon
so has part: feature:3660239-3660379:-1:exon
so has part: feature:3659414-3659534:-1:exon
so has part: feature:3654709-3654813:-1:exon
so has part: feature:3652226-3652322:-1:exon
so has part: feature:3651744-3651816:-1:exon
so has part: feature:3646121-3646220:-1:exon

XP_032325815.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3703251-3703323:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3699158-3699296:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3698419-3698543:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3694970-3695107:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3694810-3694876:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3691901-3692085:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3685567-3685903:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3678365-3678460:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3676698-3676872:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3674330-3674384:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3674161-3674245:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3673908-3674036:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3670986-3671061:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:3670807-3670878:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:3668023-3668111:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:3664166-3664325:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:3660472-3660605:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:3660239-3660379:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:3659414-3659534:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:3654709-3654813:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:3652226-3652322:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:3651744-3651816:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:3646121-3646220:-1:exon

WWP1
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 419612
gene: WWP1
product: WW domain containing E3 ubiquitin protein ligase 1, transcript variant X8
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 32 samples with support for all annotated introns
transcript id: XR_004315961.1
SIO_010081: WWP1
so part of: WWP1
location: complement(join(3646145..3646220,3651744..3651816,3652183..3652322,3654709..3654813,3659414..3659534,3660239..3660379,3660472..3660605,3664166..3664325,3668023..3668111,3670807..3670878,3670986..3671061,3673908..3674036,3674161..3674245,3674330..3674384,3676698..3676872,3678365..3678460,3685567..3685903,3691901..3692085,3694810..3694876,3694970..3695107,3698419..3698543,3699158..3699296,3703251..3703344,3710998..3711093,3731074..3731207))
location: region:3646145-3731207:-1
so has part: feature:3731074-3731207:-1:exon
so has part: feature:3710998-3711093:-1:exon
so has part: feature:3703251-3703344:-1:exon
so has part: feature:3699158-3699296:-1:exon
so has part: feature:3698419-3698543:-1:exon
so has part: feature:3694970-3695107:-1:exon
so has part: feature:3694810-3694876:-1:exon
so has part: feature:3691901-3692085:-1:exon
so has part: feature:3685567-3685903:-1:exon
so has part: feature:3678365-3678460:-1:exon
so has part: feature:3676698-3676872:-1:exon
so has part: feature:3674330-3674384:-1:exon
so has part: feature:3674161-3674245:-1:exon
so has part: feature:3673908-3674036:-1:exon
so has part: feature:3670986-3671061:-1:exon
so has part: feature:3670807-3670878:-1:exon
so has part: feature:3668023-3668111:-1:exon
so has part: feature:3664166-3664325:-1:exon
so has part: feature:3660472-3660605:-1:exon
so has part: feature:3660239-3660379:-1:exon
so has part: feature:3659414-3659534:-1:exon
so has part: feature:3654709-3654813:-1:exon
so has part: feature:3652183-3652322:-1:exon
so has part: feature:3651744-3651816:-1:exon
so has part: feature:3646145-3646220:-1:exon

position:3646145:-1
position: 3646145
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3731074-3731207:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3710998-3711093:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3703251-3703344:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3699158-3699296:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3698419-3698543:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3694970-3695107:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3694810-3694876:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3691901-3692085:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3685567-3685903:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3678365-3678460:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3676698-3676872:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3674330-3674384:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3674161-3674245:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:3673908-3674036:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:3670986-3671061:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:3670807-3670878:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:3668023-3668111:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:3664166-3664325:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:3660472-3660605:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:3660239-3660379:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:3659414-3659534:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:3654709-3654813:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:3652183-3652322:-1:exon

position:3652183:-1
position: 3652183
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:3651744-3651816:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:3646145-3646220:-1:exon

WWP1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 419612
gene: WWP1
product: WW domain containing E3 ubiquitin protein ligase 1, transcript variant X7
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 29 samples with support for all annotated introns
transcript id: XM_032469928.1
SIO_010081: WWP1
subclass of: SO_0000673
so part of: WWP1
location: complement(join(3646263..3650897,3651744..3651816,3652226..3652322,3654709..3654813,3659414..3659534,3660239..3660379,3660472..3660605,3664166..3664325,3668023..3668111,3670807..3670878,3670986..3671061,3673908..3674036,3674161..3674245,3674330..3674384,3676698..3676872,3678365..3678460,3685567..3685903,3691901..3692085,3694810..3694876,3694970..3695107,3698419..3698543,3699158..3699296,3703251..3703344,3710998..3711093,3731074..3731207))
location: region:3646263-3731207:-1
so has part: feature:3731074-3731207:-1:exon
so has part: feature:3710998-3711093:-1:exon
so has part: feature:3703251-3703344:-1:exon
so has part: feature:3699158-3699296:-1:exon
so has part: feature:3698419-3698543:-1:exon
so has part: feature:3694970-3695107:-1:exon
so has part: feature:3694810-3694876:-1:exon
so has part: feature:3691901-3692085:-1:exon
so has part: feature:3685567-3685903:-1:exon
so has part: feature:3678365-3678460:-1:exon
so has part: feature:3676698-3676872:-1:exon
so has part: feature:3674330-3674384:-1:exon
so has part: feature:3674161-3674245:-1:exon
so has part: feature:3673908-3674036:-1:exon
so has part: feature:3670986-3671061:-1:exon
so has part: feature:3670807-3670878:-1:exon
so has part: feature:3668023-3668111:-1:exon
so has part: feature:3664166-3664325:-1:exon
so has part: feature:3660472-3660605:-1:exon
so has part: feature:3660239-3660379:-1:exon
so has part: feature:3659414-3659534:-1:exon
so has part: feature:3654709-3654813:-1:exon
so has part: feature:3652226-3652322:-1:exon
so has part: feature:3651744-3651816:-1:exon
so has part: feature:3646263-3650897:-1:exon

position:3646263:-1
position: 3646263
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3731074-3731207:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3710998-3711093:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3703251-3703344:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3699158-3699296:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3698419-3698543:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3694970-3695107:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3694810-3694876:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3691901-3692085:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3685567-3685903:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3678365-3678460:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3676698-3676872:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3674330-3674384:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3674161-3674245:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:3673908-3674036:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:3670986-3671061:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:3670807-3670878:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:3668023-3668111:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:3664166-3664325:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:3660472-3660605:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:3660239-3660379:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:3659414-3659534:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:3654709-3654813:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:3652226-3652322:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:3651744-3651816:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:3646263-3650897:-1:exon

position:3650897:-1
position: 3650897
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

WWP1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 419612
gene: WWP1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: NEDD4-like E3 ubiquitin-protein ligase WWP1 isoform X3
translation: MATASPRSDTSNGNHSGRLQLQVTVSSAKLKRKKNWFGTAIYTEVVVDGESKKTAKSSSSSNPKWDEQLTINVTPQTTLEFRVWSHHTLKADALLGRATIDLKQALLVHNRKLERVKEQLKLSLETKNGVVQTGELTVVLDGLVIEQENITNCSSSPAIEIQQNGDALHENGEPSARTATRLAAEGTNGVDNHVPTGTVVQNSCCSYVVNGDSAPSSPSQVAARPKNTPAPKPLTSEPANDTVNGESSSSAPTGDASTAGTAGVAEETALSSNCISTAVEDPPVQEILASSENSECIHPNGAAFGSEARSALDPSTSNSGSSSASEAAKLRQPEGSVEPMRPQSANASTETLPSGWEQRKDPHGRTYYVDHNTRTTTWERPQPLPPGWERRVDDRGRVYYVDHNTRTTTWQRPTMESVRNFEQWQSQRSQLQGAMQQFNQRYLYSASMLAAENDPYGPLPPGWEKRVDSTDRVYFVNHNTKTTQWEDPRTQGLQNEEPLPEGWEIRYTREGVRYFVDHNTRTTTFKDPRNGKSSVTKGGPQIAYERSFRWKLAHFRYLCQSNALPSHVKINVSRQTLFEDSFQQIMALKPYDLRRRLYVIFRGEEGLDYGGLAREWFFLLSHEVLNPMYCLFEYAGKNNYCLQINPASTINPDHLSYFCFIGRFIAMALFHGKFIDTGFSLPFYKRMLSKKLTIKDLESIDTEFYNSLIWIRDNNIEECGLEMYFSVDMEILGKVTSHDLKLGGSNILVTEENKDEYIGLMTEWRFSRGVQEQTKAFLDGFNEVVPLQWLQYFDEKELEVMLCGMQEVDLADWQRNTVYRHYTRNSKQIIWFWQFVKETDNEVRMRLLQFVTGTCRLPLGGFAELMGSNGPQKFCVEKVGKDTWLPRSHT
SIO_010081: WWP1
subclass of: SO_0000673
so part of: WWP1
location: complement(join(3650897,3651744..3651816,3652226..3652322,3654709..3654813,3659414..3659534,3660239..3660379,3660472..3660605,3664166..3664325,3668023..3668111,3670807..3670878,3670986..3671061,3673908..3674036,3674161..3674245,3674330..3674384,3676698..3676872,3678365..3678460,3685567..3685903,3691901..3692085,3694810..3694876,3694970..3695107,3698419..3698543,3699158..3699296,3703251..3703323))
location: region:3650897-3703323:-1
so has part: feature:3703251-3703323:-1:exon
so has part: feature:3699158-3699296:-1:exon
so has part: feature:3698419-3698543:-1:exon
so has part: feature:3694970-3695107:-1:exon
so has part: feature:3694810-3694876:-1:exon
so has part: feature:3691901-3692085:-1:exon
so has part: feature:3685567-3685903:-1:exon
so has part: feature:3678365-3678460:-1:exon
so has part: feature:3676698-3676872:-1:exon
so has part: feature:3674330-3674384:-1:exon
so has part: feature:3674161-3674245:-1:exon
so has part: feature:3673908-3674036:-1:exon
so has part: feature:3670986-3671061:-1:exon
so has part: feature:3670807-3670878:-1:exon
so has part: feature:3668023-3668111:-1:exon
so has part: feature:3664166-3664325:-1:exon
so has part: feature:3660472-3660605:-1:exon
so has part: feature:3660239-3660379:-1:exon
so has part: feature:3659414-3659534:-1:exon
so has part: feature:3654709-3654813:-1:exon
so has part: feature:3652226-3652322:-1:exon
so has part: feature:3651744-3651816:-1:exon
so has part: feature:3650897-3650897:-1:exon

XP_032325819.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3703251-3703323:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3699158-3699296:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3698419-3698543:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3694970-3695107:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3694810-3694876:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3691901-3692085:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3685567-3685903:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3678365-3678460:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3676698-3676872:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3674330-3674384:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3674161-3674245:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3673908-3674036:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3670986-3671061:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:3670807-3670878:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:3668023-3668111:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:3664166-3664325:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:3660472-3660605:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:3660239-3660379:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:3659414-3659534:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:3654709-3654813:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:3652226-3652322:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:3651744-3651816:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:3650897-3650897:-1:exon

LOC102513323
type: Gene
subclass of: SO_0000704
RO_0002162: 419612
gene: LOC102513323
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: 3704427..3705829
location: region:3704427-3705829:1
so has part: feature:3704427-3705829:1:exon

102513323
type: Gene
SIO_000068: ncbigene

position:3704427:1
position: 3704427
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3705829:1
position: 3705829
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3704427-3705829:1:exon

LOC102513323
type: Exon
subclass of: SO_0000147
RO_0002162: 419612
gene: LOC102513323
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein
pseudo: true
SIO_010081: LOC102513323
subclass of: SO_0000673
so part of: LOC102513323
location: 3704427..3704565
location: region:3704427-3704565:1
so has part: feature:3704427-3704565:1:exon

position:3704565:1
position: 3704565
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3704427-3704565:1:exon

LOC102513323
type: Exon
subclass of: SO_0000147
RO_0002162: 419612
gene: LOC102513323
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein
pseudo: true
SIO_010081: LOC102513323
subclass of: SO_0000673
so part of: LOC102513323
location: 3705025..3705829
location: region:3705025-3705829:1
so has part: feature:3705025-3705829:1:exon

position:3705025:1
position: 3705025
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3705025-3705829:1:exon

LOC116660440
type: Gene
subclass of: SO_0000704
RO_0002162: 419612
gene: LOC116660440
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 3749299..3758613
location: region:3749299-3758613:1
so has part: feature:3749299-3758613:1:exon
subclass of: SO_0000011

116660440
type: Gene
SIO_000068: ncbigene

position:3749299:1
position: 3749299
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3758613:1
position: 3758613
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3749299-3758613:1:exon

LOC116660440
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 419612
nc RNA class: lncRNA
gene: LOC116660440
product: uncharacterized LOC116660440, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XR_004315963.1
SIO_010081: LOC116660440
subclass of: SO_0000673
so part of: LOC116660440
location: join(3749299..3749677,3750802..3750948,3752260..3752432,3757463..3758613)
location: region:3749299-3758613:1
so has part: feature:3749299-3749677:1:exon
so has part: feature:3750802-3750948:1:exon
so has part: feature:3752260-3752432:1:exon
so has part: feature:3757463-3758613:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3749299-3749677:1:exon

position:3749677:1
position: 3749677
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3750802-3750948:1:exon

position:3750802:1
position: 3750802
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3750948:1
position: 3750948
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3752260-3752432:1:exon

position:3752260:1
position: 3752260
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3752432:1
position: 3752432
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3757463-3758613:1:exon

position:3757463:1
position: 3757463
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC116660440
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 419612
nc RNA class: lncRNA
gene: LOC116660440
product: uncharacterized LOC116660440, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 15 samples with support for all annotated introns
transcript id: XR_004315962.1
SIO_010081: LOC116660440
subclass of: SO_0000673
so part of: LOC116660440
location: join(3749300..3749677,3750802..3750948,3752260..3755374)
location: region:3749300-3755374:1
so has part: feature:3749300-3749677:1:exon
so has part: feature:3750802-3750948:1:exon
so has part: feature:3752260-3755374:1:exon

position:3749300:1
position: 3749300
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3755374:1
position: 3755374
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3749300-3749677:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3750802-3750948:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3752260-3755374:1:exon

LOC116660562
type: Gene
subclass of: SO_0000704
RO_0002162: 419612
gene: LOC116660562
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: complement(3788436..3788594)
location: region:3788436-3788594:-1
so has part: feature:3788436-3788594:-1:exon
subclass of: SO_0000623

116660562
type: Gene
SIO_000068: ncbigene

position:3788436:-1
position: 3788436
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3788594:-1
position: 3788594
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3788436-3788594:-1:exon

LOC116660562
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 419612
nc RNA class: snRNA
gene: LOC116660562
product: U1 spliceosomal RNA
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00003
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_004316156.1
SIO_010081: LOC116660562
subclass of: SO_0000673
so part of: LOC116660562
location: complement(3788436..3788594)
location: region:3788436-3788594:-1
so has part: feature:3788436-3788594:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3788436-3788594:-1:exon

SLC7A13
type: Gene
subclass of: SO_0000704
RO_0002162: 419612
gene: SLC7A13
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 3788529..3807311
location: region:3788529-3807311:1
so has part: feature:3788529-3807311:1:exon
subclass of: SO_0000010

102513070
type: Gene
SIO_000068: ncbigene

position:3788529:1
position: 3788529
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3807311:1
position: 3807311
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3788529-3807311:1:exon

SLC7A13
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 419612
gene: SLC7A13
product: solute carrier family 7 member 13
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 51% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_032469910.1
SIO_010081: SLC7A13
subclass of: SO_0000673
so part of: SLC7A13
location: join(3788529..3788586,3806635..3807311)
location: region:3788529-3807311:1
so has part: feature:3788529-3788586:1:exon
so has part: feature:3806635-3807311:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3788529-3788586:1:exon

position:3788586:1
position: 3788586
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3806635-3807311:1:exon

position:3806635:1
position: 3806635
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

SLC7A13
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 419612
gene: SLC7A13
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: substituted 4 bases at 4 genomic stop codons; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
transl except: (pos:3806994..3806996,aa:OTHER)
transl except: (pos:3807150..3807152,aa:OTHER)
transl except: (pos:3807159..3807161,aa:OTHER)
transl except: (pos:3807198..3807200,aa:OTHER)
product: LOW QUALITY PROTEIN: solute carrier family 7 member 13
translation: MDEPHPGKTTFVIMVSPLPVDEKKIQLQRTFGSCWGVSFSLLVSSEQAFLWPRRGAEVLRERGLSLCTWAGCALLSRMAPLCSAEMRVTFPCRGAHYHFLKRCFGNLISFLNLWTALFLGPGLAASRALLLAEYSIQPFXPSCSAAKLPKKCLALAALRTVEILNSRGVKEVTWLQITSTTLKWPYSALILXVAXCCWWGKQNVDIFXNLFNAEFPEASRFIDAIFLGYFAYSGGGCVTFIAGN
SIO_010081: SLC7A13
subclass of: SO_0000673
so part of: SLC7A13
location: join(3788529..3788586,3806635..3807311)
location: region:3788529-3807311:1
so has part: feature:3788529-3788586:1:exon
so has part: feature:3806635-3807311:1:exon

XP_032325801.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3788529-3788586:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3806635-3807311:1:exon

LOC116660423
type: Gene
subclass of: SO_0000704
RO_0002162: 419612
gene: LOC116660423
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(3841077..3844095)
location: region:3841077-3844095:-1
so has part: feature:3841077-3844095:-1:exon
subclass of: SO_0000011

116660423
type: Gene
SIO_000068: ncbigene

position:3841077:-1
position: 3841077
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3844095:-1
position: 3844095
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3841077-3844095:-1:exon

LOC116660423
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 419612
nc RNA class: lncRNA
gene: LOC116660423
product: uncharacterized LOC116660423
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XR_004315926.1
SIO_010081: LOC116660423
subclass of: SO_0000673
so part of: LOC116660423
location: complement(join(3841077..3843203,3843342..3844095))
location: region:3841077-3844095:-1
so has part: feature:3843342-3844095:-1:exon
so has part: feature:3841077-3843203:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3843342-3844095:-1:exon

position:3843342:-1
position: 3843342
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3841077-3843203:-1:exon

position:3843203:-1
position: 3843203
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

ATP6V0D2
type: Gene
subclass of: SO_0000704
RO_0002162: 419612
gene: ATP6V0D2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(3845058..3895806)
location: region:3845058-3895806:-1
so has part: feature:3845058-3895806:-1:exon
subclass of: SO_0000010

102509234
type: Gene
SIO_000068: ncbigene

position:3845058:-1
position: 3845058
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3895806:-1
position: 3895806
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3845058-3895806:-1:exon

ATP6V0D2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 419612
gene: ATP6V0D2
product: ATPase H+ transporting V0 subunit d2
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 12 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 18 samples with support for all annotated introns
transcript id: XM_032469882.1
SIO_010081: ATP6V0D2
subclass of: SO_0000673
so part of: ATP6V0D2
location: complement(join(3845058..3846043,3847671..3847748,3848989..3849166,3856283..3856360,3857775..3857854,3859031..3859209,3882342..3882513,3895382..3895806))
location: region:3845058-3895806:-1
so has part: feature:3895382-3895806:-1:exon
so has part: feature:3882342-3882513:-1:exon
so has part: feature:3859031-3859209:-1:exon
so has part: feature:3857775-3857854:-1:exon
so has part: feature:3856283-3856360:-1:exon
so has part: feature:3848989-3849166:-1:exon
so has part: feature:3847671-3847748:-1:exon
so has part: feature:3845058-3846043:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3895382-3895806:-1:exon

position:3895382:-1
position: 3895382
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3882342-3882513:-1:exon

position:3882342:-1
position: 3882342
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3882513:-1
position: 3882513
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3859031-3859209:-1:exon

position:3859031:-1
position: 3859031
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3859209:-1
position: 3859209
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3857775-3857854:-1:exon

position:3857775:-1
position: 3857775
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3857854:-1
position: 3857854
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:3856283-3856360:-1:exon

position:3856283:-1
position: 3856283
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3856360:-1
position: 3856360
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:3848989-3849166:-1:exon

position:3848989:-1
position: 3848989
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3849166:-1
position: 3849166
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:3847671-3847748:-1:exon

position:3847671:-1
position: 3847671
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3847748:-1
position: 3847748
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:3845058-3846043:-1:exon

position:3846043:-1
position: 3846043
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

ATP6V0D2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 419612
gene: ATP6V0D2
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: V-type proton ATPase subunit d 2
translation: MLEGAELCFNVDHGYLEGLVRGCKAGLLTQQDYVNLVQCETLEDLKIHLQTTDYGNFLANQTSPLTVSTIDTEMRKKLCREFEYFRNHSLEPLSTFFTYMTCSYMIDNVILLMNGALQKKSVKEMLVKCHPLGRFTEMEAVNIAETPSELFNAILVETPLAPFFQDCMSENTLDELNIEILRNKLYKSYIEAFYKFCKNHGDVTAEIMCPILEFEADRRAFIITLNSFGTELSKEDRETLYPTCGKLYPEGLRLLAQAEDFEQMKRVADHYGVYKPLFEAVGDGSGAKTLEDVFYEREVQMNVLAFNRQFHYGVFYAYTKLKEQEMRNVVWIAECISQRHRAKINSYIPIL
SIO_010081: ATP6V0D2
subclass of: SO_0000673
so part of: ATP6V0D2
location: complement(join(3845882..3846043,3847671..3847748,3848989..3849166,3856283..3856360,3857775..3857854,3859031..3859209,3882342..3882513,3895382..3895511))
location: region:3845882-3895511:-1
so has part: feature:3895382-3895511:-1:exon
so has part: feature:3882342-3882513:-1:exon
so has part: feature:3859031-3859209:-1:exon
so has part: feature:3857775-3857854:-1:exon
so has part: feature:3856283-3856360:-1:exon
so has part: feature:3848989-3849166:-1:exon
so has part: feature:3847671-3847748:-1:exon
so has part: feature:3845882-3846043:-1:exon

XP_032325773.1
type: Protein
SIO_000068: ncbiprotein

position:3845882:-1
position: 3845882
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3895511:-1
position: 3895511
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3895382-3895511:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3882342-3882513:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3859031-3859209:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3857775-3857854:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3856283-3856360:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3848989-3849166:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3847671-3847748:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3845882-3846043:-1:exon

PSKH2
type: Gene
subclass of: SO_0000704
RO_0002162: 419612
gene: PSKH2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 3909582..3921596
location: region:3909582-3921596:1
so has part: feature:3909582-3921596:1:exon
subclass of: SO_0000010

102508986
type: Gene
SIO_000068: ncbigene

position:3909582:1
position: 3909582
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3921596:1
position: 3921596
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3909582-3921596:1:exon

PSKH2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 419612
gene: PSKH2
product: protein serine kinase H2
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 2 bases in 2 codons; deleted 4 bases in 4 codons; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 8% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_006193945.2
SIO_010081: PSKH2
subclass of: SO_0000673
so part of: PSKH2
location: join(3909582..3909764,3913860..3914519,3921310..3921596)
location: region:3909582-3921596:1
so has part: feature:3909582-3909764:1:exon
so has part: feature:3913860-3914519:1:exon
so has part: feature:3921310-3921596:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3909582-3909764:1:exon

position:3909764:1
position: 3909764
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3913860-3914519:1:exon

position:3913860:1
position: 3913860
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3914519:1
position: 3914519
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3921310-3921596:1:exon

position:3921310:1
position: 3921310
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

PSKH2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 419612
gene: PSKH2
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 2 bases in 2 codons; deleted 4 bases in 4 codons; substituted 2 bases at 2 genomic stop codons; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
transl except: (pos:3914053..3914055,aa:OTHER)
transl except: (pos:3914105..3914107,aa:OTHER)
product: LOW QUALITY PROTEIN: serine/threonine-protein kinase H2
translation: MRCGASRKVVLEPPAAAPIQCEGQGQGSWVVGPGPEAATKAAGRMQGAQFQAKFHPRGLSRYDIKALISKAVRVEQKTTKKPFAIKVMETRMREGRVVCESELTILWRVSRRDSVQLMEIFEVQGXVSIVMELMAKGGELFDXLLTQGSTTEQDAVRTLQMVADGIRYLHALRITHKDLKLENRLYYHPGAKSEILITDFGXTQSGHKSGAWTMRALCRTPDYIAPEVLLRKPYPGAVDTWALGILIMYVSLSGFPPCDDESHMRLYREILNGKYNYMGEPSHLAKDFIDKLLILEAGHRMSAGQALDQPWVITMAAGATTKNLQKVVSQNLMQKXPHSQSPASAQSSKSPSYYKSRFTWSKGNLMVEESPLSSL
SIO_010081: PSKH2
subclass of: SO_0000673
so part of: PSKH2
location: join(3909582..3909764,3913860..3914519,3921310..3921596)
location: region:3909582-3921596:1
so has part: feature:3909582-3909764:1:exon
so has part: feature:3913860-3914519:1:exon
so has part: feature:3921310-3921596:1:exon

XP_006194007.2
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3909582-3909764:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3913860-3914519:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3921310-3921596:1:exon

LOC116660453
type: Gene
subclass of: SO_0000704
RO_0002162: 419612
gene: LOC116660453
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: 4046255..4046985
location: region:4046255-4046985:1
so has part: feature:4046255-4046985:1:exon

116660453
type: Gene
SIO_000068: ncbigene

position:4046255:1
position: 4046255
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4046985:1
position: 4046985
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4046255-4046985:1:exon

LOC116660453
type: Exon
subclass of: SO_0000147
RO_0002162: 419612
gene: LOC116660453
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC116660453
subclass of: SO_0000673
so part of: LOC116660453
location: 4046255..4046985
location: region:4046255-4046985:1
so has part: feature:4046255-4046985:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4046255-4046985:1:exon

LOC102512588
type: Gene
subclass of: SO_0000704
RO_0002162: 419612
gene: LOC102512588
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: complement(4047156..4049693)
location: region:4047156-4049693:-1
so has part: feature:4047156-4049693:-1:exon

102512588
type: Gene
SIO_000068: ncbigene

position:4047156:-1
position: 4047156
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4049693:-1
position: 4049693
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4047156-4049693:-1:exon

LOC102512588
type: Exon
subclass of: SO_0000147
RO_0002162: 419612
gene: LOC102512588
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins
pseudo: true
SIO_010081: LOC102512588
subclass of: SO_0000673
so part of: LOC102512588
location: complement(4047156..4047922)
location: region:4047156-4047922:-1
so has part: feature:4047156-4047922:-1:exon

position:4047922:-1
position: 4047922
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4047156-4047922:-1:exon

LOC102512588
type: Exon
subclass of: SO_0000147
RO_0002162: 419612
gene: LOC102512588
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins
pseudo: true
SIO_010081: LOC102512588
subclass of: SO_0000673
so part of: LOC102512588
location: complement(4049688..4049693)
location: region:4049688-4049693:-1
so has part: feature:4049688-4049693:-1:exon

position:4049688:-1
position: 4049688
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4049688-4049693:-1:exon

LOC116660444
type: Gene
subclass of: SO_0000704
RO_0002162: 419612
gene: LOC116660444
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(4053687..4072355)
location: region:4053687-4072355:-1
so has part: feature:4053687-4072355:-1:exon
subclass of: SO_0000011

116660444
type: Gene
SIO_000068: ncbigene

position:4053687:-1
position: 4053687
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4072355:-1
position: 4072355
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4053687-4072355:-1:exon

LOC116660444
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 419612
nc RNA class: lncRNA
gene: LOC116660444
product: uncharacterized LOC116660444
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XR_004315966.1
SIO_010081: LOC116660444
subclass of: SO_0000673
so part of: LOC116660444
location: complement(join(4053687..4053696,4070034..4070040,4072239..4072355))
location: region:4053687-4072355:-1
so has part: feature:4072239-4072355:-1:exon
so has part: feature:4070034-4070040:-1:exon
so has part: feature:4053687-4053696:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4072239-4072355:-1:exon

position:4072239:-1
position: 4072239
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4070034-4070040:-1:exon

position:4070034:-1
position: 4070034
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4070040:-1
position: 4070040
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4053687-4053696:-1:exon

position:4053696:-1
position: 4053696
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC116660549
type: Gene
subclass of: SO_0000704
RO_0002162: 419612
gene: LOC116660549
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: complement(4064695..4064801)
location: region:4064695-4064801:-1
so has part: feature:4064695-4064801:-1:exon
subclass of: SO_0000623

116660549
type: Gene
SIO_000068: ncbigene

position:4064695:-1
position: 4064695
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4064801:-1
position: 4064801
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4064695-4064801:-1:exon

LOC116660549
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 419612
nc RNA class: snRNA
gene: LOC116660549
product: U6 spliceosomal RNA
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00026
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_004316146.1
SIO_010081: LOC116660549
subclass of: SO_0000673
so part of: LOC116660549
location: complement(4064695..4064801)
location: region:4064695-4064801:-1
so has part: feature:4064695-4064801:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4064695-4064801:-1:exon

LOC116660469
type: Gene
subclass of: SO_0000704
RO_0002162: 419612
gene: LOC116660469
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(4084468..4091427)
location: region:4084468-4091427:-1
so has part: feature:4084468-4091427:-1:exon
subclass of: SO_0000011

116660469
type: Gene
SIO_000068: ncbigene

position:4084468:-1
position: 4084468
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4091427:-1
position: 4091427
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4084468-4091427:-1:exon

LOC116660469
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 419612
nc RNA class: lncRNA
gene: LOC116660469
product: uncharacterized LOC116660469
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XR_004316007.1
SIO_010081: LOC116660469
subclass of: SO_0000673
so part of: LOC116660469
location: complement(join(4084468..4084675,4088647..4088860,4090274..4090358,4091206..4091427))
location: region:4084468-4091427:-1
so has part: feature:4091206-4091427:-1:exon
so has part: feature:4090274-4090358:-1:exon
so has part: feature:4088647-4088860:-1:exon
so has part: feature:4084468-4084675:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4091206-4091427:-1:exon

position:4091206:-1
position: 4091206
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4090274-4090358:-1:exon

position:4090274:-1
position: 4090274
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4090358:-1
position: 4090358
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4088647-4088860:-1:exon

position:4088647:-1
position: 4088647
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4088860:-1
position: 4088860
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:4084468-4084675:-1:exon

position:4084675:-1
position: 4084675
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC116660526
type: Gene
subclass of: SO_0000704
RO_0002162: 419612
gene: LOC116660526
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 4211229..4225472
location: region:4211229-4225472:1
so has part: feature:4211229-4225472:1:exon
subclass of: SO_0000011

116660526
type: Gene
SIO_000068: ncbigene

position:4211229:1
position: 4211229
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4225472:1
position: 4225472
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4211229-4225472:1:exon

LOC116660526
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 419612
nc RNA class: lncRNA
gene: LOC116660526
product: uncharacterized LOC116660526
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XR_004316105.1
SIO_010081: LOC116660526
subclass of: SO_0000673
so part of: LOC116660526
location: join(4211229..4211568,4223970..4224073,4225338..4225472)
location: region:4211229-4225472:1
so has part: feature:4211229-4211568:1:exon
so has part: feature:4223970-4224073:1:exon
so has part: feature:4225338-4225472:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4211229-4211568:1:exon

position:4211568:1
position: 4211568
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4223970-4224073:1:exon

position:4223970:1
position: 4223970
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4224073:1
position: 4224073
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4225338-4225472:1:exon

position:4225338:1
position: 4225338
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

CA2
type: Gene
subclass of: SO_0000704
RO_0002162: 419612
gene: CA2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(4214450..4228717)
location: region:4214450-4228717:-1
so has part: feature:4214450-4228717:-1:exon
subclass of: SO_0000010

102512347
type: Gene
SIO_000068: ncbigene

position:4214450:-1
position: 4214450
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4228717:-1
position: 4228717
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4214450-4228717:-1:exon

CA2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 419612
gene: CA2
product: carbonic anhydrase 2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 27 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 43 samples with support for all annotated introns
transcript id: XM_032470247.1
SIO_010081: CA2
subclass of: SO_0000673
so part of: CA2
location: complement(join(4214450..4215248,4216594..4216752,4218676..4218738,4219776..4219868,4220335..4220453,4227265..4227462,4228560..4228717))
location: region:4214450-4228717:-1
so has part: feature:4228560-4228717:-1:exon
so has part: feature:4227265-4227462:-1:exon
so has part: feature:4220335-4220453:-1:exon
so has part: feature:4219776-4219868:-1:exon
so has part: feature:4218676-4218738:-1:exon
so has part: feature:4216594-4216752:-1:exon
so has part: feature:4214450-4215248:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4228560-4228717:-1:exon

position:4228560:-1
position: 4228560
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4227265-4227462:-1:exon

position:4227265:-1
position: 4227265
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4227462:-1
position: 4227462
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4220335-4220453:-1:exon

position:4220335:-1
position: 4220335
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4220453:-1
position: 4220453
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:4219776-4219868:-1:exon

position:4219776:-1
position: 4219776
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4219868:-1
position: 4219868
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:4218676-4218738:-1:exon

position:4218676:-1
position: 4218676
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4218738:-1
position: 4218738
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:4216594-4216752:-1:exon

position:4216594:-1
position: 4216594
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4216752:-1
position: 4216752
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:4214450-4215248:-1:exon

position:4215248:-1
position: 4215248
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

CA2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 419612
gene: CA2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: carbonic anhydrase 2
translation: MSHHWGYGKHNGPEHWHKDFPNAKGDRQSPVDFDTKAVLYDPSLKPLSVRYDQATSRRIVNNGHSFNVEFDDSQDKAVLEGGPLTGTYRLAHFHFHWGSSDGQGSEHSVDKKKYAAELHFVHWNTKYGDFGKAVQQPDGLAVLGIFLKIGDAKPGLQKVVDALGAIKTKGQSADFTNFDPRGLLPQNLASYWTYPGSLTTPPLQESVIWIVLKEPIAVSSEQVAKFRTLSFSAGGEPEDPMVDNWRPTQPLKGRQVRASFQ
SIO_010081: CA2
subclass of: SO_0000673
so part of: CA2
location: complement(join(4215129..4215248,4216594..4216752,4218676..4218738,4219776..4219868,4220335..4220453,4227265..4227462,4228560..4228593))
location: region:4215129-4228593:-1
so has part: feature:4228560-4228593:-1:exon
so has part: feature:4227265-4227462:-1:exon
so has part: feature:4220335-4220453:-1:exon
so has part: feature:4219776-4219868:-1:exon
so has part: feature:4218676-4218738:-1:exon
so has part: feature:4216594-4216752:-1:exon
so has part: feature:4215129-4215248:-1:exon

XP_032326138.1
type: Protein
SIO_000068: ncbiprotein

position:4215129:-1
position: 4215129
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4228593:-1
position: 4228593
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4228560-4228593:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4227265-4227462:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4220335-4220453:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4219776-4219868:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4218676-4218738:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4216594-4216752:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4215129-4215248:-1:exon

CA3
type: Gene
subclass of: SO_0000704
RO_0002162: 419612
gene: CA3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(4243646..4253379)
location: region:4243646-4253379:-1
so has part: feature:4243646-4253379:-1:exon
subclass of: SO_0000010

102508751
type: Gene
SIO_000068: ncbigene

position:4243646:-1
position: 4243646
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4253379:-1
position: 4253379
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4243646-4253379:-1:exon

CA3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 419612
gene: CA3
product: carbonic anhydrase 3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 16 mRNAs, 24 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 31 samples with support for all annotated introns
transcript id: XM_006193944.3
SIO_010081: CA3
subclass of: SO_0000673
so part of: CA3
location: complement(join(4243646..4244615,4245549..4245704,4246796..4246858,4247991..4248083,4249939..4250057,4252246..4252443,4253139..4253379))
location: region:4243646-4253379:-1
so has part: feature:4253139-4253379:-1:exon
so has part: feature:4252246-4252443:-1:exon
so has part: feature:4249939-4250057:-1:exon
so has part: feature:4247991-4248083:-1:exon
so has part: feature:4246796-4246858:-1:exon
so has part: feature:4245549-4245704:-1:exon
so has part: feature:4243646-4244615:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4253139-4253379:-1:exon

position:4253139:-1
position: 4253139
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4252246-4252443:-1:exon

position:4252246:-1
position: 4252246
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4252443:-1
position: 4252443
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4249939-4250057:-1:exon

position:4249939:-1
position: 4249939
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4250057:-1
position: 4250057
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:4247991-4248083:-1:exon

position:4247991:-1
position: 4247991
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4248083:-1
position: 4248083
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:4246796-4246858:-1:exon

position:4246796:-1
position: 4246796
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4246858:-1
position: 4246858
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:4245549-4245704:-1:exon

position:4245549:-1
position: 4245549
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4245704:-1
position: 4245704
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:4243646-4244615:-1:exon

position:4244615:-1
position: 4244615
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

CA3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 419612
gene: CA3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: carbonic anhydrase 3
translation: MAKEWGYASHNGPDHWHELYPIAKGDNQSPIELHTKDISHDPSLLPWTAAYDPGSAKTILNNGKTCRVVFDDTYDRSMLRGGPLTGAYRLRQFHLHWGSSDDHGSEHIVDGVKYAAELHLVHWNSKYNSFASALKKPDGVAVIGIFLKIGHEKGEFQLFLDALDKIKTKGKEAPFTNFNPSSLFPACRDYWTYQGSFTTPPCEECIVWILLKEPITVSSDQMAKLRSLYASAENEPPVPLMGNWRPPQPLKGRVVKASFK
SIO_010081: CA3
subclass of: SO_0000673
so part of: CA3
location: complement(join(4244496..4244615,4245549..4245704,4246796..4246858,4247991..4248083,4249939..4250057,4252246..4252443,4253139..4253172))
location: region:4244496-4253172:-1
so has part: feature:4253139-4253172:-1:exon
so has part: feature:4252246-4252443:-1:exon
so has part: feature:4249939-4250057:-1:exon
so has part: feature:4247991-4248083:-1:exon
so has part: feature:4246796-4246858:-1:exon
so has part: feature:4245549-4245704:-1:exon
so has part: feature:4244496-4244615:-1:exon

XP_006194006.2
type: Protein
SIO_000068: ncbiprotein

position:4244496:-1
position: 4244496
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4253172:-1
position: 4253172
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4253139-4253172:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4252246-4252443:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4249939-4250057:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4247991-4248083:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4246796-4246858:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4245549-4245704:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4244496-4244615:-1:exon

LOC116660525
type: Gene
subclass of: SO_0000704
RO_0002162: 419612
gene: LOC116660525
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 4252741..4265582
location: region:4252741-4265582:1
so has part: feature:4252741-4265582:1:exon
subclass of: SO_0000011

116660525
type: Gene
SIO_000068: ncbigene

position:4252741:1
position: 4252741
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4265582:1
position: 4265582
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4252741-4265582:1:exon

LOC116660525
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 419612
nc RNA class: lncRNA
gene: LOC116660525
product: uncharacterized LOC116660525
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XR_004316103.1
SIO_010081: LOC116660525
subclass of: SO_0000673
so part of: LOC116660525
location: join(4252741..4253035,4262379..4262607,4263139..4265582)
location: region:4252741-4265582:1
so has part: feature:4252741-4253035:1:exon
so has part: feature:4262379-4262607:1:exon
so has part: feature:4263139-4265582:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4252741-4253035:1:exon

position:4253035:1
position: 4253035
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4262379-4262607:1:exon

position:4262379:1
position: 4262379
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4262607:1
position: 4262607
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4263139-4265582:1:exon

position:4263139:1
position: 4263139
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

CA1
type: Gene
subclass of: SO_0000704
RO_0002162: 419612
gene: CA1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 4285467..4337078
location: region:4285467-4337078:1
so has part: feature:4285467-4337078:1:exon
subclass of: SO_0000010

102508503
type: Gene
SIO_000068: ncbigene

position:4285467:1
position: 4285467
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4337078:1
position: 4337078
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4285467-4337078:1:exon

CA1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 419612
gene: CA1
product: carbonic anhydrase 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 27 Proteins, and 95% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_032470001.1
SIO_010081: CA1
subclass of: SO_0000673
so part of: CA1
location: join(4285467..4285507,4291217..4291286,4292618..4292695,4326791..4326851,4327995..4328192,4329684..4329802,4331842..4331937,4332816..4332878,4335494..4335649,4336632..4337078)
location: region:4285467-4337078:1
so has part: feature:4285467-4285507:1:exon
so has part: feature:4291217-4291286:1:exon
so has part: feature:4292618-4292695:1:exon
so has part: feature:4326791-4326851:1:exon
so has part: feature:4327995-4328192:1:exon
so has part: feature:4329684-4329802:1:exon
so has part: feature:4331842-4331937:1:exon
so has part: feature:4332816-4332878:1:exon
so has part: feature:4335494-4335649:1:exon
so has part: feature:4336632-4337078:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4285467-4285507:1:exon

position:4285507:1
position: 4285507
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4291217-4291286:1:exon

position:4291217:1
position: 4291217
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4291286:1
position: 4291286
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4292618-4292695:1:exon

position:4292618:1
position: 4292618
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4292695:1
position: 4292695
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:4326791-4326851:1:exon

position:4326791:1
position: 4326791
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4326851:1
position: 4326851
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:4327995-4328192:1:exon

position:4327995:1
position: 4327995
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4328192:1
position: 4328192
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:4329684-4329802:1:exon

position:4329684:1
position: 4329684
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4329802:1
position: 4329802
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:4331842-4331937:1:exon

position:4331842:1
position: 4331842
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4331937:1
position: 4331937
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:4332816-4332878:1:exon

position:4332816:1
position: 4332816
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4332878:1
position: 4332878
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:4335494-4335649:1:exon

position:4335494:1
position: 4335494
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4335649:1
position: 4335649
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:4336632-4337078:1:exon

position:4336632:1
position: 4336632
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC116660459
type: Gene
subclass of: SO_0000704
RO_0002162: 419612
gene: LOC116660459
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(4300815..4305007)
location: region:4300815-4305007:-1
so has part: feature:4300815-4305007:-1:exon
subclass of: SO_0000011

116660459
type: Gene
SIO_000068: ncbigene

position:4300815:-1
position: 4300815
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4305007:-1
position: 4305007
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4300815-4305007:-1:exon

LOC116660459
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 419612
nc RNA class: lncRNA
gene: LOC116660459
product: uncharacterized LOC116660459
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XR_004315996.1
SIO_010081: LOC116660459
subclass of: SO_0000673
so part of: LOC116660459
location: complement(join(4300815..4300985,4301114..4301234,4304920..4305007))
location: region:4300815-4305007:-1
so has part: feature:4304920-4305007:-1:exon
so has part: feature:4301114-4301234:-1:exon
so has part: feature:4300815-4300985:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4304920-4305007:-1:exon

position:4304920:-1
position: 4304920
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4301114-4301234:-1:exon

position:4301114:-1
position: 4301114
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4301234:-1
position: 4301234
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4300815-4300985:-1:exon

position:4300985:-1
position: 4300985
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC116660458
type: Gene
subclass of: SO_0000704
RO_0002162: 419612
gene: LOC116660458
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(4307146..4315228)
location: region:4307146-4315228:-1
so has part: feature:4307146-4315228:-1:exon
subclass of: SO_0000011

116660458
type: Gene
SIO_000068: ncbigene

position:4307146:-1
position: 4307146
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4315228:-1
position: 4315228
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4307146-4315228:-1:exon

LOC116660458
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 419612
nc RNA class: lncRNA
gene: LOC116660458
product: uncharacterized LOC116660458
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XR_004315995.1
SIO_010081: LOC116660458
subclass of: SO_0000673
so part of: LOC116660458
location: complement(join(4307146..4308485,4309869..4310018,4315108..4315228))
location: region:4307146-4315228:-1
so has part: feature:4315108-4315228:-1:exon
so has part: feature:4309869-4310018:-1:exon
so has part: feature:4307146-4308485:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4315108-4315228:-1:exon

position:4315108:-1
position: 4315108
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4309869-4310018:-1:exon

position:4309869:-1
position: 4309869
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4310018:-1
position: 4310018
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4307146-4308485:-1:exon

position:4308485:-1
position: 4308485
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

CA1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 419612
gene: CA1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: carbonic anhydrase 1
translation: MSSPDWGYDGDNGPEQWGKLYPIANGNNQSPINIKTSETKHDTSLKPISVSYNPATAKEIVNVGHSFHVNFEDNDNRSVLKGGPLSGSYRLRQFHFHWGITDDYGSEHLVDGVKYSAEFHIVHWNSAKYSSFAEAASQADGLAIIGVLMKVGPANPKLQKILDALKSVKTKGKSAPFTNFDPSVLLPSSLDYWTYFGSLTHPPLHESVIWIILKESISISSEQLAQFRSLLSNVEGGKEAPIKHNNRPPQPLKGRTVKASF
SIO_010081: CA1
subclass of: SO_0000673
so part of: CA1
location: join(4326815..4326851,4327995..4328192,4329684..4329802,4331842..4331937,4332816..4332878,4335494..4335649,4336632..4336748)
location: region:4326815-4336748:1
so has part: feature:4326815-4326851:1:exon
so has part: feature:4327995-4328192:1:exon
so has part: feature:4329684-4329802:1:exon
so has part: feature:4331842-4331937:1:exon
so has part: feature:4332816-4332878:1:exon
so has part: feature:4335494-4335649:1:exon
so has part: feature:4336632-4336748:1:exon

XP_032325892.1
type: Protein
SIO_000068: ncbiprotein

position:4326815:1
position: 4326815
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4336748:1
position: 4336748
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4326815-4326851:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4327995-4328192:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4329684-4329802:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4331842-4331937:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4332816-4332878:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4335494-4335649:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4336632-4336748:1:exon

CA13
type: Gene
subclass of: SO_0000704
RO_0002162: 419612
gene: CA13
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(4369343..4398249)
location: region:4369343-4398249:-1
so has part: feature:4369343-4398249:-1:exon
subclass of: SO_0000010

102508250
type: Gene
SIO_000068: ncbigene

position:4369343:-1
position: 4369343
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4398249:-1
position: 4398249
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4369343-4398249:-1:exon

CA13
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 419612
gene: CA13
product: carbonic anhydrase 13
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 29 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 28 samples with support for all annotated introns
transcript id: XM_006193942.3
SIO_010081: CA13
subclass of: SO_0000673
so part of: CA13
location: complement(join(4369343..4371624,4379143..4379298,4379814..4379876,4381174..4381269,4387465..4387583,4393272..4393469,4398002..4398249))
location: region:4369343-4398249:-1
so has part: feature:4398002-4398249:-1:exon
so has part: feature:4393272-4393469:-1:exon
so has part: feature:4387465-4387583:-1:exon
so has part: feature:4381174-4381269:-1:exon
so has part: feature:4379814-4379876:-1:exon
so has part: feature:4379143-4379298:-1:exon
so has part: feature:4369343-4371624:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4398002-4398249:-1:exon

position:4398002:-1
position: 4398002
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4393272-4393469:-1:exon

position:4393272:-1
position: 4393272
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4393469:-1
position: 4393469
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4387465-4387583:-1:exon

position:4387465:-1
position: 4387465
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4387583:-1
position: 4387583
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:4381174-4381269:-1:exon

position:4381174:-1
position: 4381174
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4381269:-1
position: 4381269
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:4379814-4379876:-1:exon

position:4379814:-1
position: 4379814
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4379876:-1
position: 4379876
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:4379143-4379298:-1:exon

position:4379143:-1
position: 4379143
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4379298:-1
position: 4379298
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:4369343-4371624:-1:exon

position:4371624:-1
position: 4371624
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

CA13
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 419612
gene: CA13
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: carbonic anhydrase 13
translation: MSRFSWGYGEHNGPIHWNQFFPIADGDQQSPIEIKTKEVKYDSSLRPLSIKYDASSAKIISNSGHSFCVDFDDTEDKSVLRGGPLTGSYRLRQFHLHWGSADDHGSEHVVDGVRYAAELHIVHWNSDKYPSFVEAAHEPDGLAVLGVFLQVGEHNSQLQKITDILELIKEKGKQTRFTNFDPLSLLPPSWDYWTYPGSLTVPPLLESVTWIVLKQPISISSQQLATFRTLMCTGEGEAAAFLLSNHRPPQPLKGRTVRASFH
SIO_010081: CA13
subclass of: SO_0000673
so part of: CA13
location: complement(join(4371505..4371624,4379143..4379298,4379814..4379876,4381174..4381269,4387465..4387583,4393272..4393469,4398002..4398038))
location: region:4371505-4398038:-1
so has part: feature:4398002-4398038:-1:exon
so has part: feature:4393272-4393469:-1:exon
so has part: feature:4387465-4387583:-1:exon
so has part: feature:4381174-4381269:-1:exon
so has part: feature:4379814-4379876:-1:exon
so has part: feature:4379143-4379298:-1:exon
so has part: feature:4371505-4371624:-1:exon

XP_006194004.1
type: Protein
SIO_000068: ncbiprotein

position:4371505:-1
position: 4371505
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4398038:-1
position: 4398038
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4398002-4398038:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4393272-4393469:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4387465-4387583:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4381174-4381269:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4379814-4379876:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4379143-4379298:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4371505-4371624:-1:exon

RBIS
type: Gene
subclass of: SO_0000704
RO_0002162: 419612
gene: RBIS
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 4411354..4416347
location: region:4411354-4416347:1
so has part: feature:4411354-4416347:1:exon
subclass of: SO_0000010

102507589
type: Gene
SIO_000068: ncbigene

position:4411354:1
position: 4411354
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4416347:1
position: 4416347
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4411354-4416347:1:exon

RBIS
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 419612
gene: RBIS
product: ribosomal biogenesis factor, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 47 samples with support for all annotated introns
transcript id: XM_032470267.1
SIO_010081: RBIS
subclass of: SO_0000673
so part of: RBIS
location: join(4411354..4411509,4413618..4413734,4415824..4415940,4416218..4416347)
location: region:4411354-4416347:1
so has part: feature:4411354-4411509:1:exon
so has part: feature:4413618-4413734:1:exon
so has part: feature:4415824-4415940:1:exon
so has part: feature:4416218-4416347:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4411354-4411509:1:exon

position:4411509:1
position: 4411509
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4413618-4413734:1:exon

position:4413618:1
position: 4413618
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4413734:1
position: 4413734
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4415824-4415940:1:exon

position:4415824:1
position: 4415824
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4415940:1
position: 4415940
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:4416218-4416347:1:exon

position:4416218:1
position: 4416218
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

RBIS
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 419612
gene: RBIS
product: ribosomal biogenesis factor, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 44 samples with support for all annotated introns
transcript id: XM_032470266.1
SIO_010081: RBIS
subclass of: SO_0000673
so part of: RBIS
location: join(4411358..4411509,4413367..4413510,4413618..4413734,4415824..4415940,4416218..4416347)
location: region:4411358-4416347:1
so has part: feature:4411358-4411509:1:exon
so has part: feature:4413367-4413510:1:exon
so has part: feature:4413618-4413734:1:exon
so has part: feature:4415824-4415940:1:exon
so has part: feature:4416218-4416347:1:exon

position:4411358:1
position: 4411358
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4411358-4411509:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4413367-4413510:1:exon

position:4413367:1
position: 4413367
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4413510:1
position: 4413510
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4413618-4413734:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4415824-4415940:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4416218-4416347:1:exon

RBIS
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 419612
gene: RBIS
product: ribosomal biogenesis factor, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 38 samples with support for all annotated introns
transcript id: XM_014567028.2
SIO_010081: RBIS
subclass of: SO_0000673
so part of: RBIS
location: join(4411375..4411509,4412059..4412227,4413618..4413734,4415824..4415940,4416218..4416347)
location: region:4411375-4416347:1
so has part: feature:4411375-4411509:1:exon
so has part: feature:4412059-4412227:1:exon
so has part: feature:4413618-4413734:1:exon
so has part: feature:4415824-4415940:1:exon
so has part: feature:4416218-4416347:1:exon

position:4411375:1
position: 4411375
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4411375-4411509:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4412059-4412227:1:exon

position:4412059:1
position: 4412059
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4412227:1
position: 4412227
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4413618-4413734:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4415824-4415940:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4416218-4416347:1:exon

RBIS
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 419612
gene: RBIS
product: ribosomal biogenesis factor, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 mRNAs, 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 47 samples with support for all annotated introns
transcript id: XM_006193939.3
SIO_010081: RBIS
subclass of: SO_0000673
so part of: RBIS
location: join(4411384..4411514,4413618..4413734,4415824..4415940,4416218..4416347)
location: region:4411384-4416347:1
so has part: feature:4411384-4411514:1:exon
so has part: feature:4413618-4413734:1:exon
so has part: feature:4415824-4415940:1:exon
so has part: feature:4416218-4416347:1:exon

position:4411384:1
position: 4411384
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4411384-4411514:1:exon

position:4411514:1
position: 4411514
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4413618-4413734:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4415824-4415940:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4416218-4416347:1:exon

RBIS
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 419612
gene: RBIS
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ribosomal biogenesis factor isoform X1
translation: MSSLGQTMAKNKLRGQKSRNVFHIASQKSFKVKNKAKPVTTNLKKIKIVNDEKVNRMNKAFIDIQKELAHFSRGLCLEPLQKQLTPEQRHEDKPVNVDEATRLMAQL
SIO_010081: RBIS
subclass of: SO_0000673
so part of: RBIS
location: join(4412210..4412227,4413618..4413734,4415824..4415940,4416218..4416289)
location: region:4412210-4416289:1
so has part: feature:4412210-4412227:1:exon
so has part: feature:4413618-4413734:1:exon
so has part: feature:4415824-4415940:1:exon
so has part: feature:4416218-4416289:1:exon

XP_014422514.1
type: Protein
SIO_000068: ncbiprotein

position:4412210:1
position: 4412210
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4416289:1
position: 4416289
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4412210-4412227:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4413618-4413734:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4415824-4415940:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4416218-4416289:1:exon

RBIS
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 419612
gene: RBIS
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ribosomal biogenesis factor isoform X2
translation: MAKNKLRGQKSRNVFHIASQKSFKVKNKAKPVTTNLKKIKIVNDEKVNRMNKAFIDIQKELAHFSRGLCLEPLQKQLTPEQRHEDKPVNVDEATRLMAQL
SIO_010081: RBIS
subclass of: SO_0000673
so part of: RBIS
location: join(4413621..4413734,4415824..4415940,4416218..4416289)
location: region:4413621-4416289:1
so has part: feature:4413621-4413734:1:exon
so has part: feature:4415824-4415940:1:exon
so has part: feature:4416218-4416289:1:exon

XP_032326157.1
type: Protein
SIO_000068: ncbiprotein

position:4413621:1
position: 4413621
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4413621-4413734:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4415824-4415940:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4416218-4416289:1:exon

RBIS
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 419612
gene: RBIS
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ribosomal biogenesis factor isoform X2
translation: MAKNKLRGQKSRNVFHIASQKSFKVKNKAKPVTTNLKKIKIVNDEKVNRMNKAFIDIQKELAHFSRGLCLEPLQKQLTPEQRHEDKPVNVDEATRLMAQL
SIO_010081: RBIS
subclass of: SO_0000673
so part of: RBIS
location: join(4413621..4413734,4415824..4415940,4416218..4416289)
location: region:4413621-4416289:1
so has part: feature:4413621-4413734:1:exon
so has part: feature:4415824-4415940:1:exon
so has part: feature:4416218-4416289:1:exon

XP_032326158.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4413621-4413734:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4415824-4415940:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4416218-4416289:1:exon

RBIS
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 419612
gene: RBIS
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ribosomal biogenesis factor isoform X2
translation: MAKNKLRGQKSRNVFHIASQKSFKVKNKAKPVTTNLKKIKIVNDEKVNRMNKAFIDIQKELAHFSRGLCLEPLQKQLTPEQRHEDKPVNVDEATRLMAQL
SIO_010081: RBIS
subclass of: SO_0000673
so part of: RBIS
location: join(4413621..4413734,4415824..4415940,4416218..4416289)
location: region:4413621-4416289:1
so has part: feature:4413621-4413734:1:exon
so has part: feature:4415824-4415940:1:exon
so has part: feature:4416218-4416289:1:exon

XP_006194001.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4413621-4413734:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4415824-4415940:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4416218-4416289:1:exon

E2F5
type: Gene
subclass of: SO_0000704
RO_0002162: 419612
gene: E2F5
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(4416331..4444896)
location: region:4416331-4444896:-1
so has part: feature:4416331-4444896:-1:exon
subclass of: SO_0000010

102507844
type: Gene
SIO_000068: ncbigene

position:4416331:-1
position: 4416331
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4444896:-1
position: 4444896
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4416331-4444896:-1:exon

E2F5
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 419612
gene: E2F5
product: E2F transcription factor 5, transcript variant X7
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 15 samples with support for all annotated introns
transcript id: XM_032470265.1
SIO_010081: E2F5
subclass of: SO_0000673
so part of: E2F5
location: complement(join(4416331..4417120,4418146..4418190,4419975..4420092,4421351..4421397,4422702..4422745,4424059..4424220,4425077..4425186,4444526..4444896))
location: region:4416331-4444896:-1
so has part: feature:4444526-4444896:-1:exon
so has part: feature:4425077-4425186:-1:exon
so has part: feature:4424059-4424220:-1:exon
so has part: feature:4422702-4422745:-1:exon
so has part: feature:4421351-4421397:-1:exon
so has part: feature:4419975-4420092:-1:exon
so has part: feature:4418146-4418190:-1:exon
so has part: feature:4416331-4417120:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4444526-4444896:-1:exon

position:4444526:-1
position: 4444526
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4425077-4425186:-1:exon

position:4425077:-1
position: 4425077
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4425186:-1
position: 4425186
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4424059-4424220:-1:exon

position:4424059:-1
position: 4424059
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4424220:-1
position: 4424220
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:4422702-4422745:-1:exon

position:4422702:-1
position: 4422702
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4422745:-1
position: 4422745
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:4421351-4421397:-1:exon

position:4421351:-1
position: 4421351
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4421397:-1
position: 4421397
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:4419975-4420092:-1:exon

position:4419975:-1
position: 4419975
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4420092:-1
position: 4420092
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:4418146-4418190:-1:exon

position:4418146:-1
position: 4418146
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4418190:-1
position: 4418190
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:4416331-4417120:-1:exon

position:4417120:-1
position: 4417120
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

E2F5
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 419612
gene: E2F5
product: E2F transcription factor 5, transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 15 samples with support for all annotated introns
transcript id: XM_032470264.1
SIO_010081: E2F5
subclass of: SO_0000673
so part of: E2F5
location: complement(join(4416331..4417120,4418146..4418193,4419975..4420092,4421351..4421397,4422702..4422745,4424059..4424220,4425077..4425186,4444526..4444896))
location: region:4416331-4444896:-1
so has part: feature:4444526-4444896:-1:exon
so has part: feature:4425077-4425186:-1:exon
so has part: feature:4424059-4424220:-1:exon
so has part: feature:4422702-4422745:-1:exon
so has part: feature:4421351-4421397:-1:exon
so has part: feature:4419975-4420092:-1:exon
so has part: feature:4418146-4418193:-1:exon
so has part: feature:4416331-4417120:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4444526-4444896:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4425077-4425186:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4424059-4424220:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4422702-4422745:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4421351-4421397:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4419975-4420092:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4418146-4418193:-1:exon

position:4418193:-1
position: 4418193
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:4416331-4417120:-1:exon

E2F5
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 419612
gene: E2F5
product: E2F transcription factor 5, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 32 samples with support for all annotated introns
transcript id: XM_032470261.1
SIO_010081: E2F5
subclass of: SO_0000673
so part of: E2F5
location: complement(join(4416331..4417120,4418146..4418193,4419975..4420242,4421351..4421397,4422702..4422745,4424059..4424220,4425077..4425186,4444526..4444896))
location: region:4416331-4444896:-1
so has part: feature:4444526-4444896:-1:exon
so has part: feature:4425077-4425186:-1:exon
so has part: feature:4424059-4424220:-1:exon
so has part: feature:4422702-4422745:-1:exon
so has part: feature:4421351-4421397:-1:exon
so has part: feature:4419975-4420242:-1:exon
so has part: feature:4418146-4418193:-1:exon
so has part: feature:4416331-4417120:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4444526-4444896:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4425077-4425186:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4424059-4424220:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4422702-4422745:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4421351-4421397:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4419975-4420242:-1:exon

position:4420242:-1
position: 4420242
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:4418146-4418193:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4416331-4417120:-1:exon

E2F5
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 419612
gene: E2F5
product: E2F transcription factor 5, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 36 samples with support for all annotated introns
transcript id: XM_032470263.1
SIO_010081: E2F5
subclass of: SO_0000673
so part of: E2F5
location: complement(join(4416331..4417120,4418146..4418190,4419975..4420092,4421333..4421397,4422702..4422745,4424059..4424220,4425077..4425186,4444526..4444896))
location: region:4416331-4444896:-1
so has part: feature:4444526-4444896:-1:exon
so has part: feature:4425077-4425186:-1:exon
so has part: feature:4424059-4424220:-1:exon
so has part: feature:4422702-4422745:-1:exon
so has part: feature:4421333-4421397:-1:exon
so has part: feature:4419975-4420092:-1:exon
so has part: feature:4418146-4418190:-1:exon
so has part: feature:4416331-4417120:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4444526-4444896:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4425077-4425186:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4424059-4424220:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4422702-4422745:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4421333-4421397:-1:exon

position:4421333:-1
position: 4421333
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:4419975-4420092:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4418146-4418190:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4416331-4417120:-1:exon

E2F5
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 419612
gene: E2F5
product: E2F transcription factor 5, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 36 samples with support for all annotated introns
transcript id: XM_032470262.1
SIO_010081: E2F5
subclass of: SO_0000673
so part of: E2F5
location: complement(join(4416331..4417120,4418146..4418193,4419975..4420092,4421333..4421397,4422702..4422745,4424059..4424220,4425077..4425186,4444526..4444896))
location: region:4416331-4444896:-1
so has part: feature:4444526-4444896:-1:exon
so has part: feature:4425077-4425186:-1:exon
so has part: feature:4424059-4424220:-1:exon
so has part: feature:4422702-4422745:-1:exon
so has part: feature:4421333-4421397:-1:exon
so has part: feature:4419975-4420092:-1:exon
so has part: feature:4418146-4418193:-1:exon
so has part: feature:4416331-4417120:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4444526-4444896:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4425077-4425186:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4424059-4424220:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4422702-4422745:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4421333-4421397:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4419975-4420092:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4418146-4418193:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4416331-4417120:-1:exon

E2F5
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 419612
gene: E2F5
product: E2F transcription factor 5, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 38 samples with support for all annotated introns
transcript id: XM_032470260.1
SIO_010081: E2F5
subclass of: SO_0000673
so part of: E2F5
location: complement(join(4416331..4417120,4418146..4418190,4419975..4420242,4421333..4421397,4422702..4422745,4424059..4424220,4425077..4425186,4444526..4444895))
location: region:4416331-4444895:-1
so has part: feature:4444526-4444895:-1:exon
so has part: feature:4425077-4425186:-1:exon
so has part: feature:4424059-4424220:-1:exon
so has part: feature:4422702-4422745:-1:exon
so has part: feature:4421333-4421397:-1:exon
so has part: feature:4419975-4420242:-1:exon
so has part: feature:4418146-4418190:-1:exon
so has part: feature:4416331-4417120:-1:exon

position:4444895:-1
position: 4444895
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4444526-4444895:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4425077-4425186:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4424059-4424220:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4422702-4422745:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4421333-4421397:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4419975-4420242:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4418146-4418190:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4416331-4417120:-1:exon

E2F5
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 419612
gene: E2F5
product: E2F transcription factor 5, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 38 samples with support for all annotated introns
transcript id: XM_032470259.1
SIO_010081: E2F5
subclass of: SO_0000673
so part of: E2F5
location: complement(join(4416331..4417120,4418146..4418193,4419975..4420242,4421333..4421397,4422702..4422745,4424059..4424220,4425077..4425186,4444526..4444895))
location: region:4416331-4444895:-1
so has part: feature:4444526-4444895:-1:exon
so has part: feature:4425077-4425186:-1:exon
so has part: feature:4424059-4424220:-1:exon
so has part: feature:4422702-4422745:-1:exon
so has part: feature:4421333-4421397:-1:exon
so has part: feature:4419975-4420242:-1:exon
so has part: feature:4418146-4418193:-1:exon
so has part: feature:4416331-4417120:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4444526-4444895:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4425077-4425186:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4424059-4424220:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4422702-4422745:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4421333-4421397:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4419975-4420242:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4418146-4418193:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4416331-4417120:-1:exon

E2F5
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 419612
gene: E2F5
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transcription factor E2F5 isoform X7
translation: MAAAEPASSGQPAPQGQGQGQGQRPQPPPSQAQPPPPPPPPPQPLGGGGGGSSRHEKSLGLLTTKFVSLLQEAKDGVLDLKAAADTLAVRQKRRIYDITNVLEGIDLIEKKSKNSIQWKGVGAGCNTKEVIDRLRYLKAEIEDLELKERELDQQKLWLQQSIKNVMDDSVNNRFSYVTHEDICNCFNGDTLLAIQAPSGTQLEPSTPVTPQKSNPATQNLPEQHVTERSQNVQQTPATDLSSGSISGDIIDELMSSDVFPLLRLSPTPADDYNFNLDDNEGVCDLFDVQILNY
SIO_010081: E2F5
subclass of: SO_0000673
so part of: E2F5
location: complement(join(4417011..4417120,4418146..4418190,4419975..4420092,4421351..4421397,4422702..4422745,4424059..4424220,4425077..4425186,4444526..4444771))
location: region:4417011-4444771:-1
so has part: feature:4444526-4444771:-1:exon
so has part: feature:4425077-4425186:-1:exon
so has part: feature:4424059-4424220:-1:exon
so has part: feature:4422702-4422745:-1:exon
so has part: feature:4421351-4421397:-1:exon
so has part: feature:4419975-4420092:-1:exon
so has part: feature:4418146-4418190:-1:exon
so has part: feature:4417011-4417120:-1:exon

XP_032326156.1
type: Protein
SIO_000068: ncbiprotein

position:4417011:-1
position: 4417011
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4444771:-1
position: 4444771
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4444526-4444771:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4425077-4425186:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4424059-4424220:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4422702-4422745:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4421351-4421397:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4419975-4420092:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4418146-4418190:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4417011-4417120:-1:exon

E2F5
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 419612
gene: E2F5
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transcription factor E2F5 isoform X6
translation: MAAAEPASSGQPAPQGQGQGQGQRPQPPPSQAQPPPPPPPPPQPLGGGGGGSSRHEKSLGLLTTKFVSLLQEAKDGVLDLKAAADTLAVRQKRRIYDITNVLEGIDLIEKKSKNSIQWKGVGAGCNTKEVIDRLRYLKAEIEDLELKERELDQQKLWLQQSIKNVMDDSVNNRFSYVTHEDICNCFNGDTLLAIQAPSGTQLEPSTPVTPQKSNPATQNLPEQHVTERSQNVQQTPATDLSSAGSISGDIIDELMSSDVFPLLRLSPTPADDYNFNLDDNEGVCDLFDVQILNY
SIO_010081: E2F5
subclass of: SO_0000673
so part of: E2F5
location: complement(join(4417011..4417120,4418146..4418193,4419975..4420092,4421351..4421397,4422702..4422745,4424059..4424220,4425077..4425186,4444526..4444771))
location: region:4417011-4444771:-1
so has part: feature:4444526-4444771:-1:exon
so has part: feature:4425077-4425186:-1:exon
so has part: feature:4424059-4424220:-1:exon
so has part: feature:4422702-4422745:-1:exon
so has part: feature:4421351-4421397:-1:exon
so has part: feature:4419975-4420092:-1:exon
so has part: feature:4418146-4418193:-1:exon
so has part: feature:4417011-4417120:-1:exon

XP_032326155.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4444526-4444771:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4425077-4425186:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4424059-4424220:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4422702-4422745:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4421351-4421397:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4419975-4420092:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4418146-4418193:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4417011-4417120:-1:exon

E2F5
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 419612
gene: E2F5
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transcription factor E2F5 isoform X3
translation: MAAAEPASSGQPAPQGQGQGQGQRPQPPPSQAQPPPPPPPPPQPLGGGGGGSSRHEKSLGLLTTKFVSLLQEAKDGVLDLKAAADTLAVRQKRRIYDITNVLEGIDLIEKKSKNSIQWKGVGAGCNTKEVIDRLRYLKAEIEDLELKERELDQQKLWLQQSIKNVMDDSVNNRFSYVTHEDICNCFNGDTLLAIQAPSGTQLEGQNGQKKYQINLKSHSGPIHVLLINKESSSSKPVVFPVPPPDDLTQPSSQPSTPVTPQKSNPATQNLPEQHVTERSQNVQQTPATDLSSAGSISGDIIDELMSSDVFPLLRLSPTPADDYNFNLDDNEGVCDLFDVQILNY
SIO_010081: E2F5
subclass of: SO_0000673
so part of: E2F5
location: complement(join(4417011..4417120,4418146..4418193,4419975..4420242,4421351..4421397,4422702..4422745,4424059..4424220,4425077..4425186,4444526..4444771))
location: region:4417011-4444771:-1
so has part: feature:4444526-4444771:-1:exon
so has part: feature:4425077-4425186:-1:exon
so has part: feature:4424059-4424220:-1:exon
so has part: feature:4422702-4422745:-1:exon
so has part: feature:4421351-4421397:-1:exon
so has part: feature:4419975-4420242:-1:exon
so has part: feature:4418146-4418193:-1:exon
so has part: feature:4417011-4417120:-1:exon

XP_032326152.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4444526-4444771:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4425077-4425186:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4424059-4424220:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4422702-4422745:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4421351-4421397:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4419975-4420242:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4418146-4418193:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4417011-4417120:-1:exon

E2F5
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 419612
gene: E2F5
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transcription factor E2F5 isoform X5
translation: MAAAEPASSGQPAPQGQGQGQGQRPQPPPSQAQPPPPPPPPPQPLGGGGGGSSRHEKSLGLLTTKFVSLLQEAKDGVLDLKAAADTLAVRQKRRIYDITNVLEGIDLIEKKSKNSIQWKGVGAGCNTKEVIDRLRYLKAEIEDLELKERELDQQKLWLQQSIKNVMDDSVNNRFSYVTHEDICNCFNGDTLLAIQAPSGTQLEVPIPEMPSTPVTPQKSNPATQNLPEQHVTERSQNVQQTPATDLSSGSISGDIIDELMSSDVFPLLRLSPTPADDYNFNLDDNEGVCDLFDVQILNY
SIO_010081: E2F5
subclass of: SO_0000673
so part of: E2F5
location: complement(join(4417011..4417120,4418146..4418190,4419975..4420092,4421333..4421397,4422702..4422745,4424059..4424220,4425077..4425186,4444526..4444771))
location: region:4417011-4444771:-1
so has part: feature:4444526-4444771:-1:exon
so has part: feature:4425077-4425186:-1:exon
so has part: feature:4424059-4424220:-1:exon
so has part: feature:4422702-4422745:-1:exon
so has part: feature:4421333-4421397:-1:exon
so has part: feature:4419975-4420092:-1:exon
so has part: feature:4418146-4418190:-1:exon
so has part: feature:4417011-4417120:-1:exon

XP_032326154.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4444526-4444771:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4425077-4425186:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4424059-4424220:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4422702-4422745:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4421333-4421397:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4419975-4420092:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4418146-4418190:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4417011-4417120:-1:exon

E2F5
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 419612
gene: E2F5
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transcription factor E2F5 isoform X4
translation: MAAAEPASSGQPAPQGQGQGQGQRPQPPPSQAQPPPPPPPPPQPLGGGGGGSSRHEKSLGLLTTKFVSLLQEAKDGVLDLKAAADTLAVRQKRRIYDITNVLEGIDLIEKKSKNSIQWKGVGAGCNTKEVIDRLRYLKAEIEDLELKERELDQQKLWLQQSIKNVMDDSVNNRFSYVTHEDICNCFNGDTLLAIQAPSGTQLEVPIPEMPSTPVTPQKSNPATQNLPEQHVTERSQNVQQTPATDLSSAGSISGDIIDELMSSDVFPLLRLSPTPADDYNFNLDDNEGVCDLFDVQILNY
SIO_010081: E2F5
subclass of: SO_0000673
so part of: E2F5
location: complement(join(4417011..4417120,4418146..4418193,4419975..4420092,4421333..4421397,4422702..4422745,4424059..4424220,4425077..4425186,4444526..4444771))
location: region:4417011-4444771:-1
so has part: feature:4444526-4444771:-1:exon
so has part: feature:4425077-4425186:-1:exon
so has part: feature:4424059-4424220:-1:exon
so has part: feature:4422702-4422745:-1:exon
so has part: feature:4421333-4421397:-1:exon
so has part: feature:4419975-4420092:-1:exon
so has part: feature:4418146-4418193:-1:exon
so has part: feature:4417011-4417120:-1:exon

XP_032326153.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4444526-4444771:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4425077-4425186:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4424059-4424220:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4422702-4422745:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4421333-4421397:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4419975-4420092:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4418146-4418193:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4417011-4417120:-1:exon

E2F5
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 419612
gene: E2F5
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transcription factor E2F5 isoform X2
translation: MAAAEPASSGQPAPQGQGQGQGQRPQPPPSQAQPPPPPPPPPQPLGGGGGGSSRHEKSLGLLTTKFVSLLQEAKDGVLDLKAAADTLAVRQKRRIYDITNVLEGIDLIEKKSKNSIQWKGVGAGCNTKEVIDRLRYLKAEIEDLELKERELDQQKLWLQQSIKNVMDDSVNNRFSYVTHEDICNCFNGDTLLAIQAPSGTQLEVPIPEMGQNGQKKYQINLKSHSGPIHVLLINKESSSSKPVVFPVPPPDDLTQPSSQPSTPVTPQKSNPATQNLPEQHVTERSQNVQQTPATDLSSGSISGDIIDELMSSDVFPLLRLSPTPADDYNFNLDDNEGVCDLFDVQILNY
SIO_010081: E2F5
subclass of: SO_0000673
so part of: E2F5
location: complement(join(4417011..4417120,4418146..4418190,4419975..4420242,4421333..4421397,4422702..4422745,4424059..4424220,4425077..4425186,4444526..4444771))
location: region:4417011-4444771:-1
so has part: feature:4444526-4444771:-1:exon
so has part: feature:4425077-4425186:-1:exon
so has part: feature:4424059-4424220:-1:exon
so has part: feature:4422702-4422745:-1:exon
so has part: feature:4421333-4421397:-1:exon
so has part: feature:4419975-4420242:-1:exon
so has part: feature:4418146-4418190:-1:exon
so has part: feature:4417011-4417120:-1:exon

XP_032326151.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4444526-4444771:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4425077-4425186:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4424059-4424220:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4422702-4422745:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4421333-4421397:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4419975-4420242:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4418146-4418190:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4417011-4417120:-1:exon

E2F5
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 419612
gene: E2F5
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transcription factor E2F5 isoform X1
translation: MAAAEPASSGQPAPQGQGQGQGQRPQPPPSQAQPPPPPPPPPQPLGGGGGGSSRHEKSLGLLTTKFVSLLQEAKDGVLDLKAAADTLAVRQKRRIYDITNVLEGIDLIEKKSKNSIQWKGVGAGCNTKEVIDRLRYLKAEIEDLELKERELDQQKLWLQQSIKNVMDDSVNNRFSYVTHEDICNCFNGDTLLAIQAPSGTQLEVPIPEMGQNGQKKYQINLKSHSGPIHVLLINKESSSSKPVVFPVPPPDDLTQPSSQPSTPVTPQKSNPATQNLPEQHVTERSQNVQQTPATDLSSAGSISGDIIDELMSSDVFPLLRLSPTPADDYNFNLDDNEGVCDLFDVQILNY
SIO_010081: E2F5
subclass of: SO_0000673
so part of: E2F5
location: complement(join(4417011..4417120,4418146..4418193,4419975..4420242,4421333..4421397,4422702..4422745,4424059..4424220,4425077..4425186,4444526..4444771))
location: region:4417011-4444771:-1
so has part: feature:4444526-4444771:-1:exon
so has part: feature:4425077-4425186:-1:exon
so has part: feature:4424059-4424220:-1:exon
so has part: feature:4422702-4422745:-1:exon
so has part: feature:4421333-4421397:-1:exon
so has part: feature:4419975-4420242:-1:exon
so has part: feature:4418146-4418193:-1:exon
so has part: feature:4417011-4417120:-1:exon

XP_032326150.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4444526-4444771:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4425077-4425186:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4424059-4424220:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4422702-4422745:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4421333-4421397:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4419975-4420242:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4418146-4418193:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4417011-4417120:-1:exon

LRRCC1
type: Gene
subclass of: SO_0000704
RO_0002162: 419612
gene: LRRCC1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(4452201..4482218)
location: region:4452201-4482218:-1
so has part: feature:4452201-4482218:-1:exon
subclass of: SO_0000010

102507312
type: Gene
SIO_000068: ncbigene

position:4452201:-1
position: 4452201
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4482218:-1
position: 4482218
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4452201-4482218:-1:exon

LRRCC1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 419612
gene: LRRCC1
product: leucine rich repeat and coiled-coil centrosomal protein 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 30 samples with support for all annotated introns
transcript id: XM_014567030.2
SIO_010081: LRRCC1
subclass of: SO_0000673
so part of: LRRCC1
location: complement(join(4452201..4452912,4454822..4454957,4456959..4457096,4457186..4457394,4460036..4460199,4461095..4461269,4462001..4462186,4462777..4462978,4464368..4464507,4465052..4465256,4468650..4468798,4469749..4469896,4470167..4470363,4475777..4475986,4476088..4476263,4478225..4478392,4479189..4479254,4481995..4482218))
location: region:4452201-4482218:-1
so has part: feature:4481995-4482218:-1:exon
so has part: feature:4479189-4479254:-1:exon
so has part: feature:4478225-4478392:-1:exon
so has part: feature:4476088-4476263:-1:exon
so has part: feature:4475777-4475986:-1:exon
so has part: feature:4470167-4470363:-1:exon
so has part: feature:4469749-4469896:-1:exon
so has part: feature:4468650-4468798:-1:exon
so has part: feature:4465052-4465256:-1:exon
so has part: feature:4464368-4464507:-1:exon
so has part: feature:4462777-4462978:-1:exon
so has part: feature:4462001-4462186:-1:exon
so has part: feature:4461095-4461269:-1:exon
so has part: feature:4460036-4460199:-1:exon
so has part: feature:4457186-4457394:-1:exon
so has part: feature:4456959-4457096:-1:exon
so has part: feature:4454822-4454957:-1:exon
so has part: feature:4452201-4452912:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4481995-4482218:-1:exon

position:4481995:-1
position: 4481995
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4479189-4479254:-1:exon

position:4479189:-1
position: 4479189
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4479254:-1
position: 4479254
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4478225-4478392:-1:exon

position:4478225:-1
position: 4478225
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4478392:-1
position: 4478392
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:4476088-4476263:-1:exon

position:4476088:-1
position: 4476088
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4476263:-1
position: 4476263
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:4475777-4475986:-1:exon

position:4475777:-1
position: 4475777
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4475986:-1
position: 4475986
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:4470167-4470363:-1:exon

position:4470167:-1
position: 4470167
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4470363:-1
position: 4470363
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:4469749-4469896:-1:exon

position:4469749:-1
position: 4469749
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4469896:-1
position: 4469896
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:4468650-4468798:-1:exon

position:4468650:-1
position: 4468650
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4468798:-1
position: 4468798
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:4465052-4465256:-1:exon

position:4465052:-1
position: 4465052
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4465256:-1
position: 4465256
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:4464368-4464507:-1:exon

position:4464368:-1
position: 4464368
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4464507:-1
position: 4464507
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:4462777-4462978:-1:exon

position:4462777:-1
position: 4462777
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4462978:-1
position: 4462978
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:4462001-4462186:-1:exon

position:4462001:-1
position: 4462001
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4462186:-1
position: 4462186
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:4461095-4461269:-1:exon

position:4461095:-1
position: 4461095
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4461269:-1
position: 4461269
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:4460036-4460199:-1:exon

position:4460036:-1
position: 4460036
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4460199:-1
position: 4460199
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:4457186-4457394:-1:exon

position:4457186:-1
position: 4457186
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4457394:-1
position: 4457394
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:4456959-4457096:-1:exon

position:4456959:-1
position: 4456959
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4457096:-1
position: 4457096
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:4454822-4454957:-1:exon

position:4454822:-1
position: 4454822
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4454957:-1
position: 4454957
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:4452201-4452912:-1:exon

position:4452912:-1
position: 4452912
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LRRCC1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 419612
gene: LRRCC1
product: leucine rich repeat and coiled-coil centrosomal protein 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 11 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 31 samples with support for all annotated introns
transcript id: XM_032469893.1
SIO_010081: LRRCC1
subclass of: SO_0000673
so part of: LRRCC1
location: complement(join(4452201..4452912,4454822..4454957,4456959..4457096,4457186..4457394,4460036..4460199,4461095..4461269,4462001..4462186,4462777..4462978,4464368..4464507,4465052..4465256,4468650..4468798,4469749..4469896,4470167..4470363,4475777..4475986,4476088..4476263,4478225..4478392,4479189..4479254,4479574..4479779,4481995..4482218))
location: region:4452201-4482218:-1
so has part: feature:4481995-4482218:-1:exon
so has part: feature:4479574-4479779:-1:exon
so has part: feature:4479189-4479254:-1:exon
so has part: feature:4478225-4478392:-1:exon
so has part: feature:4476088-4476263:-1:exon
so has part: feature:4475777-4475986:-1:exon
so has part: feature:4470167-4470363:-1:exon
so has part: feature:4469749-4469896:-1:exon
so has part: feature:4468650-4468798:-1:exon
so has part: feature:4465052-4465256:-1:exon
so has part: feature:4464368-4464507:-1:exon
so has part: feature:4462777-4462978:-1:exon
so has part: feature:4462001-4462186:-1:exon
so has part: feature:4461095-4461269:-1:exon
so has part: feature:4460036-4460199:-1:exon
so has part: feature:4457186-4457394:-1:exon
so has part: feature:4456959-4457096:-1:exon
so has part: feature:4454822-4454957:-1:exon
so has part: feature:4452201-4452912:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4481995-4482218:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4479574-4479779:-1:exon

position:4479574:-1
position: 4479574
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4479779:-1
position: 4479779
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4479189-4479254:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4478225-4478392:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4476088-4476263:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4475777-4475986:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4470167-4470363:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4469749-4469896:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4468650-4468798:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4465052-4465256:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:4464368-4464507:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:4462777-4462978:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:4462001-4462186:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:4461095-4461269:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:4460036-4460199:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:4457186-4457394:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:4456959-4457096:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:4454822-4454957:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:4452201-4452912:-1:exon

LRRCC1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 419612
gene: LRRCC1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: leucine-rich repeat and coiled-coil domain-containing protein 1 isoform X2
translation: MEAPVEAEVENEDGDSSCGDLCFMDKGLRSISELSLDSALHAINLHCNNISKIKAIDHIWNLRHLDLSSNQISQIEGLNTLTKLSTLNLSCNLITRIEGLEALTNLTRLNLSYNHINDLSGLMPLHGIKHKLRYIDLHSNCIDSIHHLLQCTVGLHFLTNLILEKNGEDNPVCHLPGYRAIMLQTLPQLRILDCKNIFGEPVDMAEINSSRLQCFEGLLDNLVSSDSPLNISEDEIIDGTPVVTPPIDEIAPLDQFASTPTDTGLASLISVCPSSEPEKVNHENDFQNEMKLQKLDNQLLQLLSETSNSLIDNVPEKDLRPKRDTDMTSESDYGIRKECSRKIPRRSKIPYYSKTIQTIKHHSKNNSPFISCNRKMKQPFFKELYVRSSLVNSNVLEESEEQKTEMIKVNNGSTEDTTYRALVEQLDQEREKRWKAEQAEKKLMDYIDELHQHANEKKDIHSLALLTTDRLKEIIFKERNSKLQLEIMVHRLQNEIKKLTIELIKARDQQEDHIRHLRTLEKALEKMEKQKGQHQAAQMRLIQEVELKAAAADREINLLRTSLHQEKEQVQQLHELLALKEQEHRKDLETREFFTEAEFQEALAKEIAKEERKHEQVIQEYQNKIDALNQQYLDLENEFRIALTVEARRFKDVKDGFENVATELAKSKHALVWAQRKENESSSLIKDLTCMVKEQKTKLAEVSKLKQETATNLQNQINTLEILIDDDKQKSIQIELLKHEKMQLIAELAAKESLIYGLRTERKVWGHELAQQGSSLAQHHGKLEAQIESLCRENESLRKAGERDNDALKIKCKIIDDQTETIGKLKECLQEREEEIKILQEKITEIQKCTQEQLDEKSSQLDDIIEKLERHNERKEKLKQQLKVKELELEEIRKAYSTLNQKWHDKGELLCHLEMQVKEAKENFENQERKLKAERDKSIELQKDAVEKLHNMDHVFKKQVDAIVEAHQAEIIQLASEKQKCIDSANSKVHRVEEEMRELLQETCKNKKAMEEKIKQLAFALNQIQQEM
SIO_010081: LRRCC1
subclass of: SO_0000673
so part of: LRRCC1
location: complement(join(4452790..4452912,4454822..4454957,4456959..4457096,4457186..4457394,4460036..4460199,4461095..4461269,4462001..4462186,4462777..4462978,4464368..4464507,4465052..4465256,4468650..4468798,4469749..4469896,4470167..4470363,4475777..4475986,4476088..4476263,4478225..4478392,4479189..4479254,4479574..4479779,4481995..4482083))
location: region:4452790-4482083:-1
so has part: feature:4481995-4482083:-1:exon
so has part: feature:4479574-4479779:-1:exon
so has part: feature:4479189-4479254:-1:exon
so has part: feature:4478225-4478392:-1:exon
so has part: feature:4476088-4476263:-1:exon
so has part: feature:4475777-4475986:-1:exon
so has part: feature:4470167-4470363:-1:exon
so has part: feature:4469749-4469896:-1:exon
so has part: feature:4468650-4468798:-1:exon
so has part: feature:4465052-4465256:-1:exon
so has part: feature:4464368-4464507:-1:exon
so has part: feature:4462777-4462978:-1:exon
so has part: feature:4462001-4462186:-1:exon
so has part: feature:4461095-4461269:-1:exon
so has part: feature:4460036-4460199:-1:exon
so has part: feature:4457186-4457394:-1:exon
so has part: feature:4456959-4457096:-1:exon
so has part: feature:4454822-4454957:-1:exon
so has part: feature:4452790-4452912:-1:exon

XP_032325784.1
type: Protein
SIO_000068: ncbiprotein

position:4452790:-1
position: 4452790
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4482083:-1
position: 4482083
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4481995-4482083:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4479574-4479779:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4479189-4479254:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4478225-4478392:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4476088-4476263:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4475777-4475986:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4470167-4470363:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4469749-4469896:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4468650-4468798:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4465052-4465256:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:4464368-4464507:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:4462777-4462978:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:4462001-4462186:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:4461095-4461269:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:4460036-4460199:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:4457186-4457394:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:4456959-4457096:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:4454822-4454957:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:4452790-4452912:-1:exon

LRRCC1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 419612
gene: LRRCC1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: leucine-rich repeat and coiled-coil domain-containing protein 1 isoform X1
translation: MRMATAAAGICASWTKACGGLEALTNLTRLNLSYNHINDLSGLMPLHGIKHKLRYIDLHSNCIDSIHHLLQCTVGLHFLTNLILEKNGEDNPVCHLPGYRAIMLQTLPQLRILDCKNIFGEPVDMAEINSSRLQCFEGLLDNLVSSDSPLNISEDEIIDGTPVVTPPIDEIAPLDQFASTPTDTGLASLISVCPSSEPEKVNHENDFQNEMKLQKLDNQLLQLLSETSNSLIDNVPEKDLRPKRDTDMTSESDYGIRKECSRKIPRRSKIPYYSKTIQTIKHHSKNNSPFISCNRKMKQPFFKELYVRSSLVNSNVLEESEEQKTEMIKVNNGSTEDTTYRALVEQLDQEREKRWKAEQAEKKLMDYIDELHQHANEKKDIHSLALLTTDRLKEIIFKERNSKLQLEIMVHRLQNEIKKLTIELIKARDQQEDHIRHLRTLEKALEKMEKQKGQHQAAQMRLIQEVELKAAAADREINLLRTSLHQEKEQVQQLHELLALKEQEHRKDLETREFFTEAEFQEALAKEIAKEERKHEQVIQEYQNKIDALNQQYLDLENEFRIALTVEARRFKDVKDGFENVATELAKSKHALVWAQRKENESSSLIKDLTCMVKEQKTKLAEVSKLKQETATNLQNQINTLEILIDDDKQKSIQIELLKHEKMQLIAELAAKESLIYGLRTERKVWGHELAQQGSSLAQHHGKLEAQIESLCRENESLRKAGERDNDALKIKCKIIDDQTETIGKLKECLQEREEEIKILQEKITEIQKCTQEQLDEKSSQLDDIIEKLERHNERKEKLKQQLKVKELELEEIRKAYSTLNQKWHDKGELLCHLEMQVKEAKENFENQERKLKAERDKSIELQKDAVEKLHNMDHVFKKQVDAIVEAHQAEIIQLASEKQKCIDSANSKVHRVEEEMRELLQETCKNKKAMEEKIKQLAFALNQIQQEM
SIO_010081: LRRCC1
subclass of: SO_0000673
so part of: LRRCC1
location: complement(join(4452790..4452912,4454822..4454957,4456959..4457096,4457186..4457394,4460036..4460199,4461095..4461269,4462001..4462186,4462777..4462978,4464368..4464507,4465052..4465256,4468650..4468798,4469749..4469896,4470167..4470363,4475777..4475986,4476088..4476263,4478225..4478392,4479189..4479254,4481995..4482052))
location: region:4452790-4482052:-1
so has part: feature:4481995-4482052:-1:exon
so has part: feature:4479189-4479254:-1:exon
so has part: feature:4478225-4478392:-1:exon
so has part: feature:4476088-4476263:-1:exon
so has part: feature:4475777-4475986:-1:exon
so has part: feature:4470167-4470363:-1:exon
so has part: feature:4469749-4469896:-1:exon
so has part: feature:4468650-4468798:-1:exon
so has part: feature:4465052-4465256:-1:exon
so has part: feature:4464368-4464507:-1:exon
so has part: feature:4462777-4462978:-1:exon
so has part: feature:4462001-4462186:-1:exon
so has part: feature:4461095-4461269:-1:exon
so has part: feature:4460036-4460199:-1:exon
so has part: feature:4457186-4457394:-1:exon
so has part: feature:4456959-4457096:-1:exon
so has part: feature:4454822-4454957:-1:exon
so has part: feature:4452790-4452912:-1:exon

XP_014422516.2
type: Protein
SIO_000068: ncbiprotein

position:4482052:-1
position: 4482052
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4481995-4482052:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4479189-4479254:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4478225-4478392:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4476088-4476263:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4475777-4475986:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4470167-4470363:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4469749-4469896:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4468650-4468798:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4465052-4465256:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4464368-4464507:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:4462777-4462978:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:4462001-4462186:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:4461095-4461269:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:4460036-4460199:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:4457186-4457394:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:4456959-4457096:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:4454822-4454957:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:4452790-4452912:-1:exon

LOC106730894
type: Gene
subclass of: SO_0000704
RO_0002162: 419612
gene: LOC106730894
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 4482279..4614557
location: region:4482279-4614557:1
so has part: feature:4482279-4614557:1:exon
subclass of: SO_0000011

106730894
type: Gene
SIO_000068: ncbigene

position:4482279:1
position: 4482279
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4614557:1
position: 4614557
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4482279-4614557:1:exon

LOC106730894
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 419612
nc RNA class: lncRNA
gene: LOC106730894
product: uncharacterized LOC106730894, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XR_004316127.1
SIO_010081: LOC106730894
subclass of: SO_0000673
so part of: LOC106730894
location: join(4482279..4482376,4482492..4482610,4609627..4609763,4614528..4614557)
location: region:4482279-4614557:1
so has part: feature:4482279-4482376:1:exon
so has part: feature:4482492-4482610:1:exon
so has part: feature:4609627-4609763:1:exon
so has part: feature:4614528-4614557:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4482279-4482376:1:exon

position:4482376:1
position: 4482376
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4482492-4482610:1:exon

position:4482492:1
position: 4482492
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4482610:1
position: 4482610
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4609627-4609763:1:exon

position:4609627:1
position: 4609627
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4609763:1
position: 4609763
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:4614528-4614557:1:exon

position:4614528:1
position: 4614528
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC106730894
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 419612
nc RNA class: lncRNA
gene: LOC106730894
product: uncharacterized LOC106730894, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XR_001367339.2
SIO_010081: LOC106730894
subclass of: SO_0000673
so part of: LOC106730894
location: join(4482279..4482376,4482492..4482610,4609627..4610638)
location: region:4482279-4610638:1
so has part: feature:4482279-4482376:1:exon
so has part: feature:4482492-4482610:1:exon
so has part: feature:4609627-4610638:1:exon

position:4610638:1
position: 4610638
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4482279-4482376:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4482492-4482610:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4609627-4610638:1:exon

LOC106730894
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 419612
nc RNA class: lncRNA
gene: LOC106730894
product: uncharacterized LOC106730894, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XR_004316129.1
SIO_010081: LOC106730894
subclass of: SO_0000673
so part of: LOC106730894
location: join(4482279..4482376,4482492..4482610,4559596..4559904)
location: region:4482279-4559904:1
so has part: feature:4482279-4482376:1:exon
so has part: feature:4482492-4482610:1:exon
so has part: feature:4559596-4559904:1:exon

position:4559904:1
position: 4559904
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4482279-4482376:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4482492-4482610:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4559596-4559904:1:exon

position:4559596:1
position: 4559596
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC106730894
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 419612
nc RNA class: lncRNA
gene: LOC106730894
product: uncharacterized LOC106730894, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XR_004316128.1
SIO_010081: LOC106730894
subclass of: SO_0000673
so part of: LOC106730894
location: join(4482279..4482376,4482492..4482610,4530564..4531379)
location: region:4482279-4531379:1
so has part: feature:4482279-4482376:1:exon
so has part: feature:4482492-4482610:1:exon
so has part: feature:4530564-4531379:1:exon

position:4531379:1
position: 4531379
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4482279-4482376:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4482492-4482610:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4530564-4531379:1:exon

position:4530564:1
position: 4530564
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC102512103
type: Gene
subclass of: SO_0000704
RO_0002162: 419612
gene: LOC102512103
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(4496244..4507245)
location: region:4496244-4507245:-1
so has part: feature:4496244-4507245:-1:exon
subclass of: SO_0000010

102512103
type: Gene
SIO_000068: ncbigene

position:4496244:-1
position: 4496244
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4507245:-1
position: 4507245
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4496244-4507245:-1:exon

LOC102512103
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 419612
gene: LOC102512103
product: solute carrier family 7 member 13-like, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_032470301.1
SIO_010081: LOC102512103
subclass of: SO_0000673
so part of: LOC102512103
location: complement(join(4496244..4496768,4499132..4499247,4504588..4504719,4506446..4507245))
location: region:4496244-4507245:-1
so has part: feature:4506446-4507245:-1:exon
so has part: feature:4504588-4504719:-1:exon
so has part: feature:4499132-4499247:-1:exon
so has part: feature:4496244-4496768:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4506446-4507245:-1:exon

position:4506446:-1
position: 4506446
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4504588-4504719:-1:exon

position:4504588:-1
position: 4504588
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4504719:-1
position: 4504719
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4499132-4499247:-1:exon

position:4499132:-1
position: 4499132
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4499247:-1
position: 4499247
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:4496244-4496768:-1:exon

position:4496768:-1
position: 4496768
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC102512103
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 419612
gene: LOC102512103
product: solute carrier family 7 member 13-like, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_006193954.3
SIO_010081: LOC102512103
subclass of: SO_0000673
so part of: LOC102512103
location: complement(join(4496244..4496768,4499132..4499493,4504588..4504719,4506446..4507245))
location: region:4496244-4507245:-1
so has part: feature:4506446-4507245:-1:exon
so has part: feature:4504588-4504719:-1:exon
so has part: feature:4499132-4499493:-1:exon
so has part: feature:4496244-4496768:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4506446-4507245:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4504588-4504719:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4499132-4499493:-1:exon

position:4499493:-1
position: 4499493
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:4496244-4496768:-1:exon

LOC102512103
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 419612
gene: LOC102512103
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: solute carrier family 7 member 13-like isoform X2
translation: MKMGGSTQLQRVIGYFHGTIFLFSIIIGAGIFVAPKGVLKYSSLNVGVSLSIWAACAVVSTMAALSHAELGTTFPRSGAQYYFLKRSLGPFIAFFYLWINLFSTPAGIAARGLLLAGYITQPFYPGCFVPEMPKKCLALAILWCLGILNARGVKEVTWFQTVSTVVKMTVLCFVSVTGLVLVVRGRKENLDRFEKAFDGEVPNASQIAEAFLQGLYAYSGWGVLVRIAGELKNPSETIPKCVITALTLVALIYLLVNVSYIAVLTPREIISSDLILLINYVGFTDWIQLGLMMTGLLKLRYQEPHLSRPYKVRLPFVFGTIAVSLFLVLTPVIKSPQMHHIYVLLFILSGLLFYLPFVHFNLGSTYFNKITCFLQLLLNVSPADDTDEYISTEETLQKNPPETPAKKE
SIO_010081: LOC102512103
subclass of: SO_0000673
so part of: LOC102512103
location: complement(join(4496475..4496768,4499132..4499247,4504588..4504719,4506446..4507130))
location: region:4496475-4507130:-1
so has part: feature:4506446-4507130:-1:exon
so has part: feature:4504588-4504719:-1:exon
so has part: feature:4499132-4499247:-1:exon
so has part: feature:4496475-4496768:-1:exon

XP_032326192.1
type: Protein
SIO_000068: ncbiprotein

position:4496475:-1
position: 4496475
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4507130:-1
position: 4507130
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4506446-4507130:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4504588-4504719:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4499132-4499247:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4496475-4496768:-1:exon

LOC102512103
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 419612
gene: LOC102512103
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: solute carrier family 7 member 13-like isoform X1
translation: MKMGGSTQLQRVIGYFHGTIFLFSIIIGAGIFVAPKGVLKYSSLNVGVSLSIWAACAVVSTMAALSHAELGTTFPRSGAQYYFLKRSLGPFIAFFYLWINLFSTPAGIAARGLLLAGYITQPFYPGCFVPEMPKKCLALAILWCLGILNARGVKEVTWFQTVSTVVKMTVLCFVSVTGLVLVVRGRKENLDRFEKAFDGEVPNASQIAEAFLQGLYAYSGWGVLVRIAGELKNPSETIPKCVITALTLVALIYLLVNVSYIAVLTPREIISSDAVAITWMDRVIPSMQWAISIGVSSSIVSSLNCTVFSTSRLWYMASQQGQLPLIFSTLNIQSCPIVAVIQMLIFASILIIPSDLILLINYVGFTDWIQLGLMMTGLLKLRYQEPHLSRPYKVRLPFVFGTIAVSLFLVLTPVIKSPQMHHIYVLLFILSGLLFYLPFVHFNLGSTYFNKITCFLQLLLNVSPADDTDEYISTEETLQKNPPETPAKKE
SIO_010081: LOC102512103
subclass of: SO_0000673
so part of: LOC102512103
location: complement(join(4496475..4496768,4499132..4499493,4504588..4504719,4506446..4507130))
location: region:4496475-4507130:-1
so has part: feature:4506446-4507130:-1:exon
so has part: feature:4504588-4504719:-1:exon
so has part: feature:4499132-4499493:-1:exon
so has part: feature:4496475-4496768:-1:exon

XP_006194016.2
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4506446-4507130:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4504588-4504719:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4499132-4499493:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4496475-4496768:-1:exon

RALYL
type: Gene
subclass of: SO_0000704
RO_0002162: 419612
gene: RALYL
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(4591240..5176576)
location: region:4591240-5176576:-1
so has part: feature:4591240-5176576:-1:exon
subclass of: SO_0000010

102506710
type: Gene
SIO_000068: ncbigene

position:4591240:-1
position: 4591240
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5176576:-1
position: 5176576
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4591240-5176576:-1:exon

RALYL
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 419612
gene: RALYL
product: RALY RNA binding protein like, transcript variant X8
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 15 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_032470310.1
SIO_010081: RALYL
subclass of: SO_0000673
so part of: RALYL
location: complement(join(4591240..4592225,4624105..4624277,4635865..4635978,4651727..4651890,4660907..4660954,4672040..4672072,4697685..4697760,4889298..4889576,5175646..5175868))
location: region:4591240-5175868:-1
so has part: feature:5175646-5175868:-1:exon
so has part: feature:4889298-4889576:-1:exon
so has part: feature:4697685-4697760:-1:exon
so has part: feature:4672040-4672072:-1:exon
so has part: feature:4660907-4660954:-1:exon
so has part: feature:4651727-4651890:-1:exon
so has part: feature:4635865-4635978:-1:exon
so has part: feature:4624105-4624277:-1:exon
so has part: feature:4591240-4592225:-1:exon

position:5175868:-1
position: 5175868
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5175646-5175868:-1:exon

position:5175646:-1
position: 5175646
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4889298-4889576:-1:exon

position:4889298:-1
position: 4889298
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4889576:-1
position: 4889576
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4697685-4697760:-1:exon

position:4697685:-1
position: 4697685
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4697760:-1
position: 4697760
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:4672040-4672072:-1:exon

position:4672040:-1
position: 4672040
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4672072:-1
position: 4672072
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:4660907-4660954:-1:exon

position:4660907:-1
position: 4660907
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4660954:-1
position: 4660954
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:4651727-4651890:-1:exon

position:4651727:-1
position: 4651727
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4651890:-1
position: 4651890
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:4635865-4635978:-1:exon

position:4635865:-1
position: 4635865
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4635978:-1
position: 4635978
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:4624105-4624277:-1:exon

position:4624105:-1
position: 4624105
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4624277:-1
position: 4624277
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:4591240-4592225:-1:exon

position:4592225:-1
position: 4592225
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

RALYL
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 419612
gene: RALYL
product: RALY RNA binding protein like, transcript variant X10
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_032470312.1
SIO_010081: RALYL
subclass of: SO_0000673
so part of: RALYL
location: complement(join(4591247..4592225,4635865..4635978,4651727..4651890,4660907..4660954,4672040..4672072,4697685..4697760,4889298..4889576,5174462..5174530))
location: region:4591247-5174530:-1
so has part: feature:5174462-5174530:-1:exon
so has part: feature:4889298-4889576:-1:exon
so has part: feature:4697685-4697760:-1:exon
so has part: feature:4672040-4672072:-1:exon
so has part: feature:4660907-4660954:-1:exon
so has part: feature:4651727-4651890:-1:exon
so has part: feature:4635865-4635978:-1:exon
so has part: feature:4591247-4592225:-1:exon

position:4591247:-1
position: 4591247
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5174530:-1
position: 5174530
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5174462-5174530:-1:exon

position:5174462:-1
position: 5174462
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4889298-4889576:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4697685-4697760:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4672040-4672072:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4660907-4660954:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4651727-4651890:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4635865-4635978:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4591247-4592225:-1:exon

RALYL
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 419612
gene: RALYL
product: RALY RNA binding protein like, transcript variant X7
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 15 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_032470309.1
SIO_010081: RALYL
subclass of: SO_0000673
so part of: RALYL
location: complement(join(4591247..4592225,4624105..4624277,4635865..4635978,4651727..4651890,4660907..4660954,4672040..4672072,4697685..4697760,4889298..4889576,5174462..5174530))
location: region:4591247-5174530:-1
so has part: feature:5174462-5174530:-1:exon
so has part: feature:4889298-4889576:-1:exon
so has part: feature:4697685-4697760:-1:exon
so has part: feature:4672040-4672072:-1:exon
so has part: feature:4660907-4660954:-1:exon
so has part: feature:4651727-4651890:-1:exon
so has part: feature:4635865-4635978:-1:exon
so has part: feature:4624105-4624277:-1:exon
so has part: feature:4591247-4592225:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5174462-5174530:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4889298-4889576:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4697685-4697760:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4672040-4672072:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4660907-4660954:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4651727-4651890:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4635865-4635978:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4624105-4624277:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4591247-4592225:-1:exon

RALYL
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 419612
gene: RALYL
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: RNA-binding Raly-like protein isoform X4
translation: MTGKTQTSNVTNKNDPKSINSRVFIGNLNTAIVKKVDIEAIFSKYGKIVGCSVHKGYAFVQYMSERHARAAVAGENARIIAGQPLDINMAGEPKPYRPKPGNKRPLSALYRLESKEPFLSVGGYVFDYDYYRDDFYNRLFDYHGRVPPPPRAVIPLKRPRVAVTTTRRGKGVFSMKGGSRSTVSGSSSSGSKLKSDELQTIKKELTQIKTKIDSLLGRLEKIEKQQKAEAVSTDKVI
SIO_010081: RALYL
subclass of: SO_0000673
so part of: RALYL
location: complement(join(4592203..4592225,4635865..4635978,4651727..4651890,4660907..4660954,4672040..4672072,4697685..4697760,4889298..4889553))
location: region:4592203-4889553:-1
so has part: feature:4889298-4889553:-1:exon
so has part: feature:4697685-4697760:-1:exon
so has part: feature:4672040-4672072:-1:exon
so has part: feature:4660907-4660954:-1:exon
so has part: feature:4651727-4651890:-1:exon
so has part: feature:4635865-4635978:-1:exon
so has part: feature:4592203-4592225:-1:exon

XP_032326203.1
type: Protein
SIO_000068: ncbiprotein

position:4592203:-1
position: 4592203
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4889553:-1
position: 4889553
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4889298-4889553:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4697685-4697760:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4672040-4672072:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4660907-4660954:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4651727-4651890:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4635865-4635978:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4592203-4592225:-1:exon

RALYL
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 419612
gene: RALYL
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: RNA-binding Raly-like protein isoform X2
translation: MTGKTQTSNVTNKNDPKSINSRVFIGNLNTAIVKKVDIEAIFSKYGKIVGCSVHKGYAFVQYMSERHARAAVAGENARIIAGQPLDINMAGEPKPYRPKPGNKRPLSALYRLESKEPFLSVGGYVFDYDYYRDDFYNRLFDYHGRVPPPPRAVIPLKRPRVAVTTTRRGKGVFSMKGGSRSTVSGSSSSGSKLKSDELQTIKKELTQIKTKIDSLLGRLEKIEKQQKAEAEAQKKQLEESIELIQDECVSENADHSTEEPAEGGPDADGEEMTDGIEEDFDEDGGHELFLQIK
SIO_010081: RALYL
subclass of: SO_0000673
so part of: RALYL
location: complement(join(4592208..4592225,4624105..4624277,4635865..4635978,4651727..4651890,4660907..4660954,4672040..4672072,4697685..4697760,4889298..4889553))
location: region:4592208-4889553:-1
so has part: feature:4889298-4889553:-1:exon
so has part: feature:4697685-4697760:-1:exon
so has part: feature:4672040-4672072:-1:exon
so has part: feature:4660907-4660954:-1:exon
so has part: feature:4651727-4651890:-1:exon
so has part: feature:4635865-4635978:-1:exon
so has part: feature:4624105-4624277:-1:exon
so has part: feature:4592208-4592225:-1:exon

XP_032326200.1
type: Protein
SIO_000068: ncbiprotein

position:4592208:-1
position: 4592208
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4889298-4889553:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4697685-4697760:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4672040-4672072:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4660907-4660954:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4651727-4651890:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4635865-4635978:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4624105-4624277:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4592208-4592225:-1:exon

RALYL
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 419612
gene: RALYL
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: RNA-binding Raly-like protein isoform X2
translation: MTGKTQTSNVTNKNDPKSINSRVFIGNLNTAIVKKVDIEAIFSKYGKIVGCSVHKGYAFVQYMSERHARAAVAGENARIIAGQPLDINMAGEPKPYRPKPGNKRPLSALYRLESKEPFLSVGGYVFDYDYYRDDFYNRLFDYHGRVPPPPRAVIPLKRPRVAVTTTRRGKGVFSMKGGSRSTVSGSSSSGSKLKSDELQTIKKELTQIKTKIDSLLGRLEKIEKQQKAEAEAQKKQLEESIELIQDECVSENADHSTEEPAEGGPDADGEEMTDGIEEDFDEDGGHELFLQIK
SIO_010081: RALYL
subclass of: SO_0000673
so part of: RALYL
location: complement(join(4592208..4592225,4624105..4624277,4635865..4635978,4651727..4651890,4660907..4660954,4672040..4672072,4697685..4697760,4889298..4889553))
location: region:4592208-4889553:-1
so has part: feature:4889298-4889553:-1:exon
so has part: feature:4697685-4697760:-1:exon
so has part: feature:4672040-4672072:-1:exon
so has part: feature:4660907-4660954:-1:exon
so has part: feature:4651727-4651890:-1:exon
so has part: feature:4635865-4635978:-1:exon
so has part: feature:4624105-4624277:-1:exon
so has part: feature:4592208-4592225:-1:exon

XP_032326201.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4889298-4889553:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4697685-4697760:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4672040-4672072:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4660907-4660954:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4651727-4651890:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4635865-4635978:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4624105-4624277:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4592208-4592225:-1:exon

RALYL
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 419612
gene: RALYL
product: RALY RNA binding protein like, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 15 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_032470307.1
SIO_010081: RALYL
subclass of: SO_0000673
so part of: RALYL
location: complement(join(4623872..4624277,4635865..4635978,4651727..4651890,4660907..4660954,4672040..4672072,4697685..4697760,4889298..4889576,5176511..5176576))
location: region:4623872-5176576:-1
so has part: feature:5176511-5176576:-1:exon
so has part: feature:4889298-4889576:-1:exon
so has part: feature:4697685-4697760:-1:exon
so has part: feature:4672040-4672072:-1:exon
so has part: feature:4660907-4660954:-1:exon
so has part: feature:4651727-4651890:-1:exon
so has part: feature:4635865-4635978:-1:exon
so has part: feature:4623872-4624277:-1:exon

position:4623872:-1
position: 4623872
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5176511-5176576:-1:exon

position:5176511:-1
position: 5176511
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4889298-4889576:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4697685-4697760:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4672040-4672072:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4660907-4660954:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4651727-4651890:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4635865-4635978:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4623872-4624277:-1:exon

RALYL
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 419612
gene: RALYL
product: RALY RNA binding protein like, transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 15 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_032470308.1
SIO_010081: RALYL
subclass of: SO_0000673
so part of: RALYL
location: complement(join(4623872..4624277,4635865..4635978,4651727..4651890,4660907..4660954,4672040..4672072,4697685..4697760,4889298..4889576,5176206..5176504))
location: region:4623872-5176504:-1
so has part: feature:5176206-5176504:-1:exon
so has part: feature:4889298-4889576:-1:exon
so has part: feature:4697685-4697760:-1:exon
so has part: feature:4672040-4672072:-1:exon
so has part: feature:4660907-4660954:-1:exon
so has part: feature:4651727-4651890:-1:exon
so has part: feature:4635865-4635978:-1:exon
so has part: feature:4623872-4624277:-1:exon

position:5176504:-1
position: 5176504
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5176206-5176504:-1:exon

position:5176206:-1
position: 5176206
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4889298-4889576:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4697685-4697760:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4672040-4672072:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4660907-4660954:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4651727-4651890:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4635865-4635978:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4623872-4624277:-1:exon

RALYL
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 419612
gene: RALYL
product: RALY RNA binding protein like, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 15 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_032470306.1
SIO_010081: RALYL
subclass of: SO_0000673
so part of: RALYL
location: complement(join(4623872..4624277,4635865..4635978,4651727..4651890,4660907..4660954,4672040..4672072,4697685..4697760,4889298..4889576,5175646..5175872))
location: region:4623872-5175872:-1
so has part: feature:5175646-5175872:-1:exon
so has part: feature:4889298-4889576:-1:exon
so has part: feature:4697685-4697760:-1:exon
so has part: feature:4672040-4672072:-1:exon
so has part: feature:4660907-4660954:-1:exon
so has part: feature:4651727-4651890:-1:exon
so has part: feature:4635865-4635978:-1:exon
so has part: feature:4623872-4624277:-1:exon

position:5175872:-1
position: 5175872
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5175646-5175872:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4889298-4889576:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4697685-4697760:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4672040-4672072:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4660907-4660954:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4651727-4651890:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4635865-4635978:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4623872-4624277:-1:exon

RALYL
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 419612
gene: RALYL
product: RALY RNA binding protein like, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 17 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
transcript id: XM_032470302.1
SIO_010081: RALYL
subclass of: SO_0000673
so part of: RALYL
location: complement(join(4623872..4624277,4635865..4635978,4651727..4651890,4660907..4660954,4672040..4672072,4697685..4697760,4889298..4889576,5174462..5174530))
location: region:4623872-5174530:-1
so has part: feature:5174462-5174530:-1:exon
so has part: feature:4889298-4889576:-1:exon
so has part: feature:4697685-4697760:-1:exon
so has part: feature:4672040-4672072:-1:exon
so has part: feature:4660907-4660954:-1:exon
so has part: feature:4651727-4651890:-1:exon
so has part: feature:4635865-4635978:-1:exon
so has part: feature:4623872-4624277:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5174462-5174530:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4889298-4889576:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4697685-4697760:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4672040-4672072:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4660907-4660954:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4651727-4651890:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4635865-4635978:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4623872-4624277:-1:exon

RALYL
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 419612
gene: RALYL
product: RALY RNA binding protein like, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 15 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_032470305.1
SIO_010081: RALYL
subclass of: SO_0000673
so part of: RALYL
location: complement(join(4623872..4624277,4635865..4635978,4651727..4651890,4660907..4660954,4672040..4672072,4697685..4697760,4889298..4889576,5079395..5079919))
location: region:4623872-5079919:-1
so has part: feature:5079395-5079919:-1:exon
so has part: feature:4889298-4889576:-1:exon
so has part: feature:4697685-4697760:-1:exon
so has part: feature:4672040-4672072:-1:exon
so has part: feature:4660907-4660954:-1:exon
so has part: feature:4651727-4651890:-1:exon
so has part: feature:4635865-4635978:-1:exon
so has part: feature:4623872-4624277:-1:exon

position:5079919:-1
position: 5079919
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5079395-5079919:-1:exon

position:5079395:-1
position: 5079395
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4889298-4889576:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4697685-4697760:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4672040-4672072:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4660907-4660954:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4651727-4651890:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4635865-4635978:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4623872-4624277:-1:exon

RALYL
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 419612
gene: RALYL
product: RALY RNA binding protein like, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 15 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 11 samples with support for all annotated introns
transcript id: XM_032470303.1
SIO_010081: RALYL
subclass of: SO_0000673
so part of: RALYL
location: complement(join(4623873..4624277,4635865..4635978,4651727..4651890,4660907..4660954,4672040..4672072,4697685..4697760,4889298..4889576,5174784..5175628))
location: region:4623873-5175628:-1
so has part: feature:5174784-5175628:-1:exon
so has part: feature:4889298-4889576:-1:exon
so has part: feature:4697685-4697760:-1:exon
so has part: feature:4672040-4672072:-1:exon
so has part: feature:4660907-4660954:-1:exon
so has part: feature:4651727-4651890:-1:exon
so has part: feature:4635865-4635978:-1:exon
so has part: feature:4623873-4624277:-1:exon

position:4623873:-1
position: 4623873
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5175628:-1
position: 5175628
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5174784-5175628:-1:exon

position:5174784:-1
position: 5174784
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4889298-4889576:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4697685-4697760:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4672040-4672072:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4660907-4660954:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4651727-4651890:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4635865-4635978:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4623873-4624277:-1:exon

RALYL
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 419612
gene: RALYL
product: RALY RNA binding protein like, transcript variant X9
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
transcript id: XM_032470311.1
SIO_010081: RALYL
subclass of: SO_0000673
so part of: RALYL
location: complement(join(4623876..4624277,4635865..4635978,4651727..4651890,4660907..4660954,4672040..4672072,4697685..4697760,4750452..4750714))
location: region:4623876-4750714:-1
so has part: feature:4750452-4750714:-1:exon
so has part: feature:4697685-4697760:-1:exon
so has part: feature:4672040-4672072:-1:exon
so has part: feature:4660907-4660954:-1:exon
so has part: feature:4651727-4651890:-1:exon
so has part: feature:4635865-4635978:-1:exon
so has part: feature:4623876-4624277:-1:exon

position:4623876:-1
position: 4623876
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4750714:-1
position: 4750714
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4750452-4750714:-1:exon

position:4750452:-1
position: 4750452
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4697685-4697760:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4672040-4672072:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4660907-4660954:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4651727-4651890:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4635865-4635978:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4623876-4624277:-1:exon

RALYL
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 419612
gene: RALYL
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: RNA-binding Raly-like protein isoform X1
translation: MTGKTQTSNVTNKNDPKSINSRVFIGNLNTAIVKKVDIEAIFSKYGKIVGCSVHKGYAFVQYMSERHARAAVAGENARIIAGQPLDINMAGEPKPYRPKPGNKRPLSALYRLESKEPFLSVGGYVFDYDYYRDDFYNRLFDYHGRVPPPPRAVIPLKRPRVAVTTTRRGKGVFSMKGGSRSTVSGSSSSGSKLKSDELQTIKKELTQIKTKIDSLLGRLEKIEKQQKAEAEAQKKQLEESIELIQDECVSENADHSTEEPAEGGPDADGEEMTDGIEEDFDEDGGHELVGTKHLVPAPFGNSPSMSATHSF
SIO_010081: RALYL
subclass of: SO_0000673
so part of: RALYL
location: complement(join(4624033..4624277,4635865..4635978,4651727..4651890,4660907..4660954,4672040..4672072,4697685..4697760,4889298..4889553))
location: region:4624033-4889553:-1
so has part: feature:4889298-4889553:-1:exon
so has part: feature:4697685-4697760:-1:exon
so has part: feature:4672040-4672072:-1:exon
so has part: feature:4660907-4660954:-1:exon
so has part: feature:4651727-4651890:-1:exon
so has part: feature:4635865-4635978:-1:exon
so has part: feature:4624033-4624277:-1:exon

XP_032326193.1
type: Protein
SIO_000068: ncbiprotein

position:4624033:-1
position: 4624033
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4889298-4889553:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4697685-4697760:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4672040-4672072:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4660907-4660954:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4651727-4651890:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4635865-4635978:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4624033-4624277:-1:exon

RALYL
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 419612
gene: RALYL
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: RNA-binding Raly-like protein isoform X1
translation: MTGKTQTSNVTNKNDPKSINSRVFIGNLNTAIVKKVDIEAIFSKYGKIVGCSVHKGYAFVQYMSERHARAAVAGENARIIAGQPLDINMAGEPKPYRPKPGNKRPLSALYRLESKEPFLSVGGYVFDYDYYRDDFYNRLFDYHGRVPPPPRAVIPLKRPRVAVTTTRRGKGVFSMKGGSRSTVSGSSSSGSKLKSDELQTIKKELTQIKTKIDSLLGRLEKIEKQQKAEAEAQKKQLEESIELIQDECVSENADHSTEEPAEGGPDADGEEMTDGIEEDFDEDGGHELVGTKHLVPAPFGNSPSMSATHSF
SIO_010081: RALYL
subclass of: SO_0000673
so part of: RALYL
location: complement(join(4624033..4624277,4635865..4635978,4651727..4651890,4660907..4660954,4672040..4672072,4697685..4697760,4889298..4889553))
location: region:4624033-4889553:-1
so has part: feature:4889298-4889553:-1:exon
so has part: feature:4697685-4697760:-1:exon
so has part: feature:4672040-4672072:-1:exon
so has part: feature:4660907-4660954:-1:exon
so has part: feature:4651727-4651890:-1:exon
so has part: feature:4635865-4635978:-1:exon
so has part: feature:4624033-4624277:-1:exon

XP_032326194.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4889298-4889553:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4697685-4697760:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4672040-4672072:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4660907-4660954:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4651727-4651890:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4635865-4635978:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4624033-4624277:-1:exon

RALYL
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 419612
gene: RALYL
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: RNA-binding Raly-like protein isoform X1
translation: MTGKTQTSNVTNKNDPKSINSRVFIGNLNTAIVKKVDIEAIFSKYGKIVGCSVHKGYAFVQYMSERHARAAVAGENARIIAGQPLDINMAGEPKPYRPKPGNKRPLSALYRLESKEPFLSVGGYVFDYDYYRDDFYNRLFDYHGRVPPPPRAVIPLKRPRVAVTTTRRGKGVFSMKGGSRSTVSGSSSSGSKLKSDELQTIKKELTQIKTKIDSLLGRLEKIEKQQKAEAEAQKKQLEESIELIQDECVSENADHSTEEPAEGGPDADGEEMTDGIEEDFDEDGGHELVGTKHLVPAPFGNSPSMSATHSF
SIO_010081: RALYL
subclass of: SO_0000673
so part of: RALYL
location: complement(join(4624033..4624277,4635865..4635978,4651727..4651890,4660907..4660954,4672040..4672072,4697685..4697760,4889298..4889553))
location: region:4624033-4889553:-1
so has part: feature:4889298-4889553:-1:exon
so has part: feature:4697685-4697760:-1:exon
so has part: feature:4672040-4672072:-1:exon
so has part: feature:4660907-4660954:-1:exon
so has part: feature:4651727-4651890:-1:exon
so has part: feature:4635865-4635978:-1:exon
so has part: feature:4624033-4624277:-1:exon

XP_032326196.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4889298-4889553:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4697685-4697760:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4672040-4672072:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4660907-4660954:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4651727-4651890:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4635865-4635978:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4624033-4624277:-1:exon

RALYL
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 419612
gene: RALYL
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: RNA-binding Raly-like protein isoform X1
translation: MTGKTQTSNVTNKNDPKSINSRVFIGNLNTAIVKKVDIEAIFSKYGKIVGCSVHKGYAFVQYMSERHARAAVAGENARIIAGQPLDINMAGEPKPYRPKPGNKRPLSALYRLESKEPFLSVGGYVFDYDYYRDDFYNRLFDYHGRVPPPPRAVIPLKRPRVAVTTTRRGKGVFSMKGGSRSTVSGSSSSGSKLKSDELQTIKKELTQIKTKIDSLLGRLEKIEKQQKAEAEAQKKQLEESIELIQDECVSENADHSTEEPAEGGPDADGEEMTDGIEEDFDEDGGHELVGTKHLVPAPFGNSPSMSATHSF
SIO_010081: RALYL
subclass of: SO_0000673
so part of: RALYL
location: complement(join(4624033..4624277,4635865..4635978,4651727..4651890,4660907..4660954,4672040..4672072,4697685..4697760,4889298..4889553))
location: region:4624033-4889553:-1
so has part: feature:4889298-4889553:-1:exon
so has part: feature:4697685-4697760:-1:exon
so has part: feature:4672040-4672072:-1:exon
so has part: feature:4660907-4660954:-1:exon
so has part: feature:4651727-4651890:-1:exon
so has part: feature:4635865-4635978:-1:exon
so has part: feature:4624033-4624277:-1:exon

XP_032326197.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4889298-4889553:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4697685-4697760:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4672040-4672072:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4660907-4660954:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4651727-4651890:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4635865-4635978:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4624033-4624277:-1:exon

RALYL
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 419612
gene: RALYL
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: RNA-binding Raly-like protein isoform X1
translation: MTGKTQTSNVTNKNDPKSINSRVFIGNLNTAIVKKVDIEAIFSKYGKIVGCSVHKGYAFVQYMSERHARAAVAGENARIIAGQPLDINMAGEPKPYRPKPGNKRPLSALYRLESKEPFLSVGGYVFDYDYYRDDFYNRLFDYHGRVPPPPRAVIPLKRPRVAVTTTRRGKGVFSMKGGSRSTVSGSSSSGSKLKSDELQTIKKELTQIKTKIDSLLGRLEKIEKQQKAEAEAQKKQLEESIELIQDECVSENADHSTEEPAEGGPDADGEEMTDGIEEDFDEDGGHELVGTKHLVPAPFGNSPSMSATHSF
SIO_010081: RALYL
subclass of: SO_0000673
so part of: RALYL
location: complement(join(4624033..4624277,4635865..4635978,4651727..4651890,4660907..4660954,4672040..4672072,4697685..4697760,4889298..4889553))
location: region:4624033-4889553:-1
so has part: feature:4889298-4889553:-1:exon
so has part: feature:4697685-4697760:-1:exon
so has part: feature:4672040-4672072:-1:exon
so has part: feature:4660907-4660954:-1:exon
so has part: feature:4651727-4651890:-1:exon
so has part: feature:4635865-4635978:-1:exon
so has part: feature:4624033-4624277:-1:exon

XP_032326198.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4889298-4889553:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4697685-4697760:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4672040-4672072:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4660907-4660954:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4651727-4651890:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4635865-4635978:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4624033-4624277:-1:exon

RALYL
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 419612
gene: RALYL
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: RNA-binding Raly-like protein isoform X1
translation: MTGKTQTSNVTNKNDPKSINSRVFIGNLNTAIVKKVDIEAIFSKYGKIVGCSVHKGYAFVQYMSERHARAAVAGENARIIAGQPLDINMAGEPKPYRPKPGNKRPLSALYRLESKEPFLSVGGYVFDYDYYRDDFYNRLFDYHGRVPPPPRAVIPLKRPRVAVTTTRRGKGVFSMKGGSRSTVSGSSSSGSKLKSDELQTIKKELTQIKTKIDSLLGRLEKIEKQQKAEAEAQKKQLEESIELIQDECVSENADHSTEEPAEGGPDADGEEMTDGIEEDFDEDGGHELVGTKHLVPAPFGNSPSMSATHSF
SIO_010081: RALYL
subclass of: SO_0000673
so part of: RALYL
location: complement(join(4624033..4624277,4635865..4635978,4651727..4651890,4660907..4660954,4672040..4672072,4697685..4697760,4889298..4889553))
location: region:4624033-4889553:-1
so has part: feature:4889298-4889553:-1:exon
so has part: feature:4697685-4697760:-1:exon
so has part: feature:4672040-4672072:-1:exon
so has part: feature:4660907-4660954:-1:exon
so has part: feature:4651727-4651890:-1:exon
so has part: feature:4635865-4635978:-1:exon
so has part: feature:4624033-4624277:-1:exon

XP_032326199.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4889298-4889553:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4697685-4697760:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4672040-4672072:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4660907-4660954:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4651727-4651890:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4635865-4635978:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4624033-4624277:-1:exon

RALYL
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 419612
gene: RALYL
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: RNA-binding Raly-like protein isoform X3
translation: MTMYRSKRRHQRYINMAGEPKPYRPKPGNKRPLSALYRLESKEPFLSVGGYVFDYDYYRDDFYNRLFDYHGRVPPPPRAVIPLKRPRVAVTTTRRGKGVFSMKGGSRSTVSGSSSSGSKLKSDELQTIKKELTQIKTKIDSLLGRLEKIEKQQKAEAEAQKKQLEESIELIQDECVSENADHSTEEPAEGGPDADGEEMTDGIEEDFDEDGGHELVGTKHLVPAPFGNSPSMSATHSF
SIO_010081: RALYL
subclass of: SO_0000673
so part of: RALYL
location: complement(join(4624033..4624277,4635865..4635978,4651727..4651890,4660907..4660954,4672040..4672072,4697685..4697760,4750452..4750488))
location: region:4624033-4750488:-1
so has part: feature:4750452-4750488:-1:exon
so has part: feature:4697685-4697760:-1:exon
so has part: feature:4672040-4672072:-1:exon
so has part: feature:4660907-4660954:-1:exon
so has part: feature:4651727-4651890:-1:exon
so has part: feature:4635865-4635978:-1:exon
so has part: feature:4624033-4624277:-1:exon

XP_032326202.1
type: Protein
SIO_000068: ncbiprotein

position:4750488:-1
position: 4750488
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4750452-4750488:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4697685-4697760:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4672040-4672072:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4660907-4660954:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4651727-4651890:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4635865-4635978:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4624033-4624277:-1:exon

LOC116660538
type: Gene
subclass of: SO_0000704
RO_0002162: 419612
gene: LOC116660538
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 5185207..5261050
location: region:5185207-5261050:1
so has part: feature:5185207-5261050:1:exon
subclass of: SO_0000011

116660538
type: Gene
SIO_000068: ncbigene

position:5185207:1
position: 5185207
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5261050:1
position: 5261050
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5185207-5261050:1:exon

LOC116660538
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 419612
nc RNA class: lncRNA
gene: LOC116660538
product: uncharacterized LOC116660538
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XR_004316130.1
SIO_010081: LOC116660538
subclass of: SO_0000673
so part of: LOC116660538
location: join(5185207..5185268,5186983..5187164,5255067..5255127,5260863..5261050)
location: region:5185207-5261050:1
so has part: feature:5185207-5185268:1:exon
so has part: feature:5186983-5187164:1:exon
so has part: feature:5255067-5255127:1:exon
so has part: feature:5260863-5261050:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5185207-5185268:1:exon

position:5185268:1
position: 5185268
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:5186983-5187164:1:exon

position:5186983:1
position: 5186983
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5187164:1
position: 5187164
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:5255067-5255127:1:exon

position:5255067:1
position: 5255067
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5255127:1
position: 5255127
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:5260863-5261050:1:exon

position:5260863:1
position: 5260863
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC116660449
type: Gene
subclass of: SO_0000704
RO_0002162: 419612
gene: LOC116660449
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 5405829..5430799
location: region:5405829-5430799:1
so has part: feature:5405829-5430799:1:exon
subclass of: SO_0000011

116660449
type: Gene
SIO_000068: ncbigene

position:5405829:1
position: 5405829
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5430799:1
position: 5430799
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5405829-5430799:1:exon

LOC116660449
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 419612
nc RNA class: lncRNA
gene: LOC116660449
product: uncharacterized LOC116660449
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XR_004315978.1
SIO_010081: LOC116660449
subclass of: SO_0000673
so part of: LOC116660449
location: join(5405829..5405925,5411455..5411459,5415323..5415329,5430788..5430799)
location: region:5405829-5430799:1
so has part: feature:5405829-5405925:1:exon
so has part: feature:5411455-5411459:1:exon
so has part: feature:5415323-5415329:1:exon
so has part: feature:5430788-5430799:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5405829-5405925:1:exon

position:5405925:1
position: 5405925
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:5411455-5411459:1:exon

position:5411455:1
position: 5411455
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5411459:1
position: 5411459
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:5415323-5415329:1:exon

position:5415323:1
position: 5415323
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5415329:1
position: 5415329
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:5430788-5430799:1:exon

position:5430788:1
position: 5430788
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC116660427
type: Gene
subclass of: SO_0000704
RO_0002162: 419612
gene: LOC116660427
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(5636453..5650954)
location: region:5636453-5650954:-1
so has part: feature:5636453-5650954:-1:exon
subclass of: SO_0000011

116660427
type: Gene
SIO_000068: ncbigene

position:5636453:-1
position: 5636453
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5650954:-1
position: 5650954
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5636453-5650954:-1:exon

LOC116660427
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 419612
nc RNA class: lncRNA
gene: LOC116660427
product: uncharacterized LOC116660427
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XR_004315934.1
SIO_010081: LOC116660427
subclass of: SO_0000673
so part of: LOC116660427
location: complement(join(5636453..5636464,5640753..5640755,5650877..5650954))
location: region:5636453-5650954:-1
so has part: feature:5650877-5650954:-1:exon
so has part: feature:5640753-5640755:-1:exon
so has part: feature:5636453-5636464:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5650877-5650954:-1:exon

position:5650877:-1
position: 5650877
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:5640753-5640755:-1:exon

position:5640753:-1
position: 5640753
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5640755:-1
position: 5640755
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:5636453-5636464:-1:exon

position:5636464:-1
position: 5636464
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC102511865
type: Gene
subclass of: SO_0000704
RO_0002162: 419612
gene: LOC102511865
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: complement(5735775..5751193)
location: region:5735775-5751193:-1
so has part: feature:5735775-5751193:-1:exon

102511865
type: Gene
SIO_000068: ncbigene

position:5735775:-1
position: 5735775
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5751193:-1
position: 5751193
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5735775-5751193:-1:exon

LOC102511865
type: Exon
subclass of: SO_0000147
RO_0002162: 419612
gene: LOC102511865
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 43% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC102511865
subclass of: SO_0000673
so part of: LOC102511865
location: complement(5735775..5736341)
location: region:5735775-5736341:-1
so has part: feature:5735775-5736341:-1:exon

position:5736341:-1
position: 5736341
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5735775-5736341:-1:exon

LOC102511865
type: Exon
subclass of: SO_0000147
RO_0002162: 419612
gene: LOC102511865
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 43% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC102511865
subclass of: SO_0000673
so part of: LOC102511865
location: complement(5749924..5750064)
location: region:5749924-5750064:-1
so has part: feature:5749924-5750064:-1:exon

position:5749924:-1
position: 5749924
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5750064:-1
position: 5750064
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5749924-5750064:-1:exon

LOC102511865
type: Exon
subclass of: SO_0000147
RO_0002162: 419612
gene: LOC102511865
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 43% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC102511865
subclass of: SO_0000673
so part of: LOC102511865
location: complement(5751068..5751193)
location: region:5751068-5751193:-1
so has part: feature:5751068-5751193:-1:exon

position:5751068:-1
position: 5751068
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5751068-5751193:-1:exon

LOC116660552
type: Gene
subclass of: SO_0000704
RO_0002162: 419612
gene: LOC116660552
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: 5943560..5943665
location: region:5943560-5943665:1
so has part: feature:5943560-5943665:1:exon
subclass of: SO_0000623

116660552
type: Gene
SIO_000068: ncbigene

position:5943560:1
position: 5943560
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5943665:1
position: 5943665
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5943560-5943665:1:exon

LOC116660552
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 419612
nc RNA class: snRNA
gene: LOC116660552
product: U6 spliceosomal RNA
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00026
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_004316149.1
SIO_010081: LOC116660552
subclass of: SO_0000673
so part of: LOC116660552
location: 5943560..5943665
location: region:5943560-5943665:1
so has part: feature:5943560-5943665:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5943560-5943665:1:exon

SNX16
type: Gene
subclass of: SO_0000704
RO_0002162: 419612
gene: SNX16
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 6345950..6378595
location: region:6345950-6378595:1
so has part: feature:6345950-6378595:1:exon
subclass of: SO_0000010

102506281
type: Gene
SIO_000068: ncbigene

position:6345950:1
position: 6345950
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6378595:1
position: 6378595
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6345950-6378595:1:exon

SNX16
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 419612
gene: SNX16
product: sorting nexin 16, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 38 samples with support for all annotated introns
transcript id: XM_032470220.1
SIO_010081: SNX16
subclass of: SO_0000673
so part of: SNX16
location: join(6345950..6346098,6347791..6348265,6352836..6352922,6359920..6360068,6368194..6368263,6374784..6374920,6375452..6375571,6376324..6378595)
location: region:6345950-6378595:1
so has part: feature:6345950-6346098:1:exon
so has part: feature:6347791-6348265:1:exon
so has part: feature:6352836-6352922:1:exon
so has part: feature:6359920-6360068:1:exon
so has part: feature:6368194-6368263:1:exon
so has part: feature:6374784-6374920:1:exon
so has part: feature:6375452-6375571:1:exon
so has part: feature:6376324-6378595:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6345950-6346098:1:exon

position:6346098:1
position: 6346098
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:6347791-6348265:1:exon

position:6347791:1
position: 6347791
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6348265:1
position: 6348265
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:6352836-6352922:1:exon

position:6352836:1
position: 6352836
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6352922:1
position: 6352922
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:6359920-6360068:1:exon

position:6359920:1
position: 6359920
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6360068:1
position: 6360068
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:6368194-6368263:1:exon

position:6368194:1
position: 6368194
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6368263:1
position: 6368263
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:6374784-6374920:1:exon

position:6374784:1
position: 6374784
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6374920:1
position: 6374920
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:6375452-6375571:1:exon

position:6375452:1
position: 6375452
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6375571:1
position: 6375571
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:6376324-6378595:1:exon

position:6376324:1
position: 6376324
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

SNX16
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 419612
gene: SNX16
product: sorting nexin 16, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 28 samples with support for all annotated introns
transcript id: XM_032470221.1
SIO_010081: SNX16
subclass of: SO_0000673
so part of: SNX16
location: join(6345950..6346098,6347791..6348038,6348126..6348265,6352836..6352922,6359920..6360068,6368194..6368263,6374784..6374920,6375452..6375571,6376324..6378595)
location: region:6345950-6378595:1
so has part: feature:6345950-6346098:1:exon
so has part: feature:6347791-6348038:1:exon
so has part: feature:6348126-6348265:1:exon
so has part: feature:6352836-6352922:1:exon
so has part: feature:6359920-6360068:1:exon
so has part: feature:6368194-6368263:1:exon
so has part: feature:6374784-6374920:1:exon
so has part: feature:6375452-6375571:1:exon
so has part: feature:6376324-6378595:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6345950-6346098:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6347791-6348038:1:exon

position:6348038:1
position: 6348038
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:6348126-6348265:1:exon

position:6348126:1
position: 6348126
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:6352836-6352922:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6359920-6360068:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:6368194-6368263:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:6374784-6374920:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:6375452-6375571:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:6376324-6378595:1:exon

SNX16
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 419612
gene: SNX16
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: sorting nexin-16 isoform X1
translation: MATPYVPVPMPIGNSASSFTTSRNQRSSSFGSISTSSNSSKGQLEDANMGNFKQTSVPDQMDSTSSVCSSPLIRTKFTGADSSIEYSARPRESDEQNPETVNWEDRPSTPTILGYEVMEERAKFTVYKILVKKTPEESWVVFRRYTDFSRLNDKLKEMFPGFRLALPPKRWFKDNYNADFLEDRQLGLQAFLQNLVAHKDIANCLAVREFLCLDDPPGPFDSLEESRAFCETLEETNYRFQKELLEKQKELESLKKLLSEKQLHIDTLENRLRALSLEPEESLLMSGTGGGQILKVESSALEVDQDVLDEESRADNKQYLSSHEPENSVSDIEVAEVAYNAEED
SIO_010081: SNX16
subclass of: SO_0000673
so part of: SNX16
location: join(6347891..6348265,6352836..6352922,6359920..6360068,6368194..6368263,6374784..6374920,6375452..6375571,6376324..6376420)
location: region:6347891-6376420:1
so has part: feature:6347891-6348265:1:exon
so has part: feature:6352836-6352922:1:exon
so has part: feature:6359920-6360068:1:exon
so has part: feature:6368194-6368263:1:exon
so has part: feature:6374784-6374920:1:exon
so has part: feature:6375452-6375571:1:exon
so has part: feature:6376324-6376420:1:exon

XP_032326111.1
type: Protein
SIO_000068: ncbiprotein

position:6347891:1
position: 6347891
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6376420:1
position: 6376420
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6347891-6348265:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6352836-6352922:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6359920-6360068:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6368194-6368263:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6374784-6374920:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:6375452-6375571:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:6376324-6376420:1:exon

SNX16
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 419612
gene: SNX16
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: sorting nexin-16 isoform X2
translation: MATPYVPVPMPIGNSASSFTTSRNQRSSSFGSISTSSNSSKGQLEDANMGADSSIEYSARPRESDEQNPETVNWEDRPSTPTILGYEVMEERAKFTVYKILVKKTPEESWVVFRRYTDFSRLNDKLKEMFPGFRLALPPKRWFKDNYNADFLEDRQLGLQAFLQNLVAHKDIANCLAVREFLCLDDPPGPFDSLEESRAFCETLEETNYRFQKELLEKQKELESLKKLLSEKQLHIDTLENRLRALSLEPEESLLMSGTGGGQILKVESSALEVDQDVLDEESRADNKQYLSSHEPENSVSDIEVAEVAYNAEED
SIO_010081: SNX16
subclass of: SO_0000673
so part of: SNX16
location: join(6347891..6348038,6348126..6348265,6352836..6352922,6359920..6360068,6368194..6368263,6374784..6374920,6375452..6375571,6376324..6376420)
location: region:6347891-6376420:1
so has part: feature:6347891-6348038:1:exon
so has part: feature:6348126-6348265:1:exon
so has part: feature:6352836-6352922:1:exon
so has part: feature:6359920-6360068:1:exon
so has part: feature:6368194-6368263:1:exon
so has part: feature:6374784-6374920:1:exon
so has part: feature:6375452-6375571:1:exon
so has part: feature:6376324-6376420:1:exon

XP_032326112.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:6347891-6348038:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6348126-6348265:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6352836-6352922:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6359920-6360068:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6368194-6368263:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:6374784-6374920:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:6375452-6375571:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:6376324-6376420:1:exon

CHMP4C
type: Gene
subclass of: SO_0000704
RO_0002162: 419612
gene: CHMP4C
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(6397275..6422450)
location: region:6397275-6422450:-1
so has part: feature:6397275-6422450:-1:exon
subclass of: SO_0000010

102506029
type: Gene
SIO_000068: ncbigene

position:6397275:-1
position: 6397275
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6422450:-1
position: 6422450
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6397275-6422450:-1:exon

CHMP4C
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 419612
gene: CHMP4C
product: charged multivesicular body protein 4C
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 11 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 36 samples with support for all annotated introns
transcript id: XM_006193932.3
SIO_010081: CHMP4C
subclass of: SO_0000673
so part of: CHMP4C
location: complement(join(6397275..6398862,6399047..6399212,6401871..6401985,6404166..6404343,6422060..6422450))
location: region:6397275-6422450:-1
so has part: feature:6422060-6422450:-1:exon
so has part: feature:6404166-6404343:-1:exon
so has part: feature:6401871-6401985:-1:exon
so has part: feature:6399047-6399212:-1:exon
so has part: feature:6397275-6398862:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6422060-6422450:-1:exon

position:6422060:-1
position: 6422060
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:6404166-6404343:-1:exon

position:6404166:-1
position: 6404166
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6404343:-1
position: 6404343
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:6401871-6401985:-1:exon

position:6401871:-1
position: 6401871
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6401985:-1
position: 6401985
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:6399047-6399212:-1:exon

position:6399047:-1
position: 6399047
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6399212:-1
position: 6399212
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:6397275-6398862:-1:exon

position:6398862:-1
position: 6398862
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

CHMP4C
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 419612
gene: CHMP4C
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: charged multivesicular body protein 4c
translation: MSKLGKFFKGGGSSKSRAAPSPQEALARLRETEEMLGKKQEYLENRIQRELSLAKKHGTRNKRAALQALKRKKRYEKQLTQIDGTLSTIEFQREALENSHTNTEVLRNMGLAAKAMKAVHENMDVNKIDDLMQEITEQQDIAQEISEAFSQRVGFGDDFDEDELMAELEELEQEELNKKMTNIRLPSVPSSSLPAQPDRVPGRMPSVPSSAHRARAASSRRAEEEDDDIKQLAAWAT
SIO_010081: CHMP4C
subclass of: SO_0000673
so part of: CHMP4C
location: complement(join(6398798..6398862,6399047..6399212,6401871..6401985,6404166..6404343,6422060..6422249))
location: region:6398798-6422249:-1
so has part: feature:6422060-6422249:-1:exon
so has part: feature:6404166-6404343:-1:exon
so has part: feature:6401871-6401985:-1:exon
so has part: feature:6399047-6399212:-1:exon
so has part: feature:6398798-6398862:-1:exon

XP_006193994.1
type: Protein
SIO_000068: ncbiprotein

position:6398798:-1
position: 6398798
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6422249:-1
position: 6422249
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6422060-6422249:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6404166-6404343:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6401871-6401985:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6399047-6399212:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6398798-6398862:-1:exon

ZFAND1
type: Gene
subclass of: SO_0000704
RO_0002162: 419612
gene: ZFAND1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 6433027..6450040
location: region:6433027-6450040:1
so has part: feature:6433027-6450040:1:exon
subclass of: SO_0000010

102511609
type: Gene
SIO_000068: ncbigene

position:6433027:1
position: 6433027
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6450040:1
position: 6450040
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6433027-6450040:1:exon

ZFAND1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 419612
gene: ZFAND1
product: zinc finger AN1-type containing 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 37 samples with support for all annotated introns
transcript id: XM_032470319.1
SIO_010081: ZFAND1
subclass of: SO_0000673
so part of: ZFAND1
location: join(6433027..6433155,6434447..6434489,6435402..6435441,6437501..6437628,6437714..6437805,6438574..6438695,6448669..6448824,6448917..6450040)
location: region:6433027-6450040:1
so has part: feature:6433027-6433155:1:exon
so has part: feature:6434447-6434489:1:exon
so has part: feature:6435402-6435441:1:exon
so has part: feature:6437501-6437628:1:exon
so has part: feature:6437714-6437805:1:exon
so has part: feature:6438574-6438695:1:exon
so has part: feature:6448669-6448824:1:exon
so has part: feature:6448917-6450040:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6433027-6433155:1:exon

position:6433155:1
position: 6433155
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:6434447-6434489:1:exon

position:6434447:1
position: 6434447
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6434489:1
position: 6434489
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:6435402-6435441:1:exon

position:6435402:1
position: 6435402
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6435441:1
position: 6435441
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:6437501-6437628:1:exon

position:6437501:1
position: 6437501
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6437628:1
position: 6437628
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:6437714-6437805:1:exon

position:6437714:1
position: 6437714
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6437805:1
position: 6437805
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:6438574-6438695:1:exon

position:6438574:1
position: 6438574
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6438695:1
position: 6438695
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:6448669-6448824:1:exon

position:6448669:1
position: 6448669
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6448824:1
position: 6448824
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:6448917-6450040:1:exon

position:6448917:1
position: 6448917
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

ZFAND1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 419612
gene: ZFAND1
product: zinc finger AN1-type containing 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 34 samples with support for all annotated introns
transcript id: XM_032470320.1
SIO_010081: ZFAND1
subclass of: SO_0000673
so part of: ZFAND1
location: join(6433027..6433155,6434447..6434489,6435402..6435441,6437501..6437628,6437714..6437805,6438574..6438695,6448705..6448824,6448917..6450040)
location: region:6433027-6450040:1
so has part: feature:6433027-6433155:1:exon
so has part: feature:6434447-6434489:1:exon
so has part: feature:6435402-6435441:1:exon
so has part: feature:6437501-6437628:1:exon
so has part: feature:6437714-6437805:1:exon
so has part: feature:6438574-6438695:1:exon
so has part: feature:6448705-6448824:1:exon
so has part: feature:6448917-6450040:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6433027-6433155:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6434447-6434489:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6435402-6435441:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6437501-6437628:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6437714-6437805:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:6438574-6438695:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:6448705-6448824:1:exon

position:6448705:1
position: 6448705
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:6448917-6450040:1:exon

ZFAND1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 419612
gene: ZFAND1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: AN1-type zinc finger protein 1 isoform X1
translation: MAELNIGQHCQVEHCRQRDFLPFVCDGCSGIFCLEHRSRESHGCPEVTVINERLKSDTHTSYPCSFKDCAGRELVPVVCPYCEKNFCLRHRHQSDHECEKLEIPKPRMAATQKLVKDIIDSKTGETASKRRKGAKNSETAAKVALMKLKMHADGDKSLPQAERIYFQVFFPKGSKEKSRPMFFCQRWSIGKVIDAAASLASLRNDNNKSTAQKLRLCHVTSGEALPLDHILETWIAKEDCPLHNGGNIILEYLNDEEQFLKNIDSYLE
SIO_010081: ZFAND1
subclass of: SO_0000673
so part of: ZFAND1
location: join(6433101..6433155,6434447..6434489,6435402..6435441,6437501..6437628,6437714..6437805,6438574..6438695,6448669..6448824,6448917..6449087)
location: region:6433101-6449087:1
so has part: feature:6433101-6433155:1:exon
so has part: feature:6434447-6434489:1:exon
so has part: feature:6435402-6435441:1:exon
so has part: feature:6437501-6437628:1:exon
so has part: feature:6437714-6437805:1:exon
so has part: feature:6438574-6438695:1:exon
so has part: feature:6448669-6448824:1:exon
so has part: feature:6448917-6449087:1:exon

XP_032326210.1
type: Protein
SIO_000068: ncbiprotein

position:6433101:1
position: 6433101
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6449087:1
position: 6449087
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6433101-6433155:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6434447-6434489:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6435402-6435441:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6437501-6437628:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6437714-6437805:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:6438574-6438695:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:6448669-6448824:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:6448917-6449087:1:exon

ZFAND1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 419612
gene: ZFAND1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: AN1-type zinc finger protein 1 isoform X2
translation: MAELNIGQHCQVEHCRQRDFLPFVCDGCSGIFCLEHRSRESHGCPEVTVINERLKSDTHTSYPCSFKDCAGRELVPVVCPYCEKNFCLRHRHQSDHECEKLEIPKPRMAATQKLVKDIIDSKTGETASKRRKGAKNSETAAKVALMKLKMHADGDKSLPQGSKEKSRPMFFCQRWSIGKVIDAAASLASLRNDNNKSTAQKLRLCHVTSGEALPLDHILETWIAKEDCPLHNGGNIILEYLNDEEQFLKNIDSYLE
SIO_010081: ZFAND1
subclass of: SO_0000673
so part of: ZFAND1
location: join(6433101..6433155,6434447..6434489,6435402..6435441,6437501..6437628,6437714..6437805,6438574..6438695,6448705..6448824,6448917..6449087)
location: region:6433101-6449087:1
so has part: feature:6433101-6433155:1:exon
so has part: feature:6434447-6434489:1:exon
so has part: feature:6435402-6435441:1:exon
so has part: feature:6437501-6437628:1:exon
so has part: feature:6437714-6437805:1:exon
so has part: feature:6438574-6438695:1:exon
so has part: feature:6448705-6448824:1:exon
so has part: feature:6448917-6449087:1:exon

XP_032326211.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:6433101-6433155:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6434447-6434489:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6435402-6435441:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6437501-6437628:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6437714-6437805:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:6438574-6438695:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:6448705-6448824:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:6448917-6449087:1:exon

SLC10A5
type: Gene
subclass of: SO_0000704
RO_0002162: 419612
gene: SLC10A5
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 6452440..6459331
location: region:6452440-6459331:1
so has part: feature:6452440-6459331:1:exon
subclass of: SO_0000010

102511360
type: Gene
SIO_000068: ncbigene

position:6452440:1
position: 6452440
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6459331:1
position: 6459331
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6452440-6459331:1:exon

SLC10A5
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 419612
gene: SLC10A5
product: solute carrier family 10 member 5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_032470314.1
SIO_010081: SLC10A5
subclass of: SO_0000673
so part of: SLC10A5
location: 6452440..6459331
location: region:6452440-6459331:1
so has part: feature:6452440-6459331:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6452440-6459331:1:exon

SLC10A5
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 419612
gene: SLC10A5
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: sodium/bile acid cotransporter 5
translation: MIRELLIVLLLSFVTLGEARKSFLSFLNREKTEIFFFTQTEETIVVRSNYREKQPNSSFLFVQLEDPKILQVVNVTKTFSDVTDFTINLVTDEDGETNLTVQLWVSKGRRERLIEVKNVKVRVLRPRPDGLFQASNHIDRNILMLFLPMILLNKCAFGCKIELQVFQTVWKRPLPIILATITQFFLMPFCGFLLTQILALPEAQAFGFVMTCTCPGGGGGYLFALLLEGDVTLAILMTCMSTLLALIMMPANSYIYSRLLGLSGTLHSPVFKIMSTLLFILTPISVGIVIKHRLPEKATFLERIVRPLSLILMFIGVYLTFRMGLSFLKAVNLEVLLLSVFVPALGLLFGFFFAKISMLPLPVCKTVSIESGVVNSFLALAIIQLSFSQTHADLASVAPFTVAMCSGCEMLLILLFYKAKKRWILILEEKRQKNLPV
SIO_010081: SLC10A5
subclass of: SO_0000673
so part of: SLC10A5
location: 6452723..6454036
location: region:6452723-6454036:1
so has part: feature:6452723-6454036:1:exon

XP_032326205.1
type: Protein
SIO_000068: ncbiprotein

position:6452723:1
position: 6452723
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6454036:1
position: 6454036
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6452723-6454036:1:exon

IMPA1
type: Gene
subclass of: SO_0000704
RO_0002162: 419612
gene: IMPA1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 6459529..6478305
location: region:6459529-6478305:1
so has part: feature:6459529-6478305:1:exon
subclass of: SO_0000010

102505773
type: Gene
SIO_000068: ncbigene

position:6459529:1
position: 6459529
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6478305:1
position: 6478305
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6459529-6478305:1:exon

IMPA1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 419612
gene: IMPA1
product: inositol monophosphatase 1, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 mRNAs, 10 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 14 samples with support for all annotated introns
transcript id: XM_032470317.1
SIO_010081: IMPA1
subclass of: SO_0000673
so part of: IMPA1
location: join(6459529..6459669,6463776..6463841,6464218..6464351,6466347..6466451,6467776..6467821,6470057..6470165,6471568..6471676,6475331..6475482,6476338..6478305)
location: region:6459529-6478305:1
so has part: feature:6459529-6459669:1:exon
so has part: feature:6463776-6463841:1:exon
so has part: feature:6464218-6464351:1:exon
so has part: feature:6466347-6466451:1:exon
so has part: feature:6467776-6467821:1:exon
so has part: feature:6470057-6470165:1:exon
so has part: feature:6471568-6471676:1:exon
so has part: feature:6475331-6475482:1:exon
so has part: feature:6476338-6478305:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6459529-6459669:1:exon

position:6459669:1
position: 6459669
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:6463776-6463841:1:exon

position:6463776:1
position: 6463776
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6463841:1
position: 6463841
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:6464218-6464351:1:exon

position:6464218:1
position: 6464218
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6464351:1
position: 6464351
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:6466347-6466451:1:exon

position:6466347:1
position: 6466347
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6466451:1
position: 6466451
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:6467776-6467821:1:exon

position:6467776:1
position: 6467776
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6467821:1
position: 6467821
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:6470057-6470165:1:exon

position:6470057:1
position: 6470057
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6470165:1
position: 6470165
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:6471568-6471676:1:exon

position:6471568:1
position: 6471568
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6471676:1
position: 6471676
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:6475331-6475482:1:exon

position:6475331:1
position: 6475331
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6475482:1
position: 6475482
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:6476338-6478305:1:exon

position:6476338:1
position: 6476338
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

IMPA1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 419612
gene: IMPA1
product: inositol monophosphatase 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 mRNAs, 10 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 40 samples with support for all annotated introns
transcript id: XM_032470315.1
SIO_010081: IMPA1
subclass of: SO_0000673
so part of: IMPA1
location: join(6460674..6460787,6463776..6463841,6464218..6464351,6466347..6466451,6467776..6467821,6470057..6470165,6471568..6471676,6475331..6475482,6476338..6478305)
location: region:6460674-6478305:1
so has part: feature:6460674-6460787:1:exon
so has part: feature:6463776-6463841:1:exon
so has part: feature:6464218-6464351:1:exon
so has part: feature:6466347-6466451:1:exon
so has part: feature:6467776-6467821:1:exon
so has part: feature:6470057-6470165:1:exon
so has part: feature:6471568-6471676:1:exon
so has part: feature:6475331-6475482:1:exon
so has part: feature:6476338-6478305:1:exon

position:6460674:1
position: 6460674
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6460674-6460787:1:exon

position:6460787:1
position: 6460787
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:6463776-6463841:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6464218-6464351:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6466347-6466451:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6467776-6467821:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:6470057-6470165:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:6471568-6471676:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:6475331-6475482:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:6476338-6478305:1:exon

IMPA1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 419612
gene: IMPA1
product: inositol monophosphatase 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 mRNAs, 10 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 41 samples with support for all annotated introns
transcript id: XM_032470316.1
SIO_010081: IMPA1
subclass of: SO_0000673
so part of: IMPA1
location: join(6460679..6460787,6463779..6463841,6464218..6464351,6466347..6466451,6467776..6467821,6470057..6470165,6471568..6471676,6475331..6475482,6476338..6478305)
location: region:6460679-6478305:1
so has part: feature:6460679-6460787:1:exon
so has part: feature:6463779-6463841:1:exon
so has part: feature:6464218-6464351:1:exon
so has part: feature:6466347-6466451:1:exon
so has part: feature:6467776-6467821:1:exon
so has part: feature:6470057-6470165:1:exon
so has part: feature:6471568-6471676:1:exon
so has part: feature:6475331-6475482:1:exon
so has part: feature:6476338-6478305:1:exon

position:6460679:1
position: 6460679
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6460679-6460787:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6463779-6463841:1:exon

position:6463779:1
position: 6463779
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:6464218-6464351:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6466347-6466451:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6467776-6467821:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:6470057-6470165:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:6471568-6471676:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:6475331-6475482:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:6476338-6478305:1:exon

IMPA1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 419612
gene: IMPA1
product: inositol monophosphatase 1, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 mRNAs, 10 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
transcript id: XM_032470318.1
SIO_010081: IMPA1
subclass of: SO_0000673
so part of: IMPA1
location: join(6460701..6460827,6463776..6463841,6464218..6464351,6466347..6466451,6467776..6467821,6470057..6470165,6471568..6471676,6475331..6475482,6476338..6478305)
location: region:6460701-6478305:1
so has part: feature:6460701-6460827:1:exon
so has part: feature:6463776-6463841:1:exon
so has part: feature:6464218-6464351:1:exon
so has part: feature:6466347-6466451:1:exon
so has part: feature:6467776-6467821:1:exon
so has part: feature:6470057-6470165:1:exon
so has part: feature:6471568-6471676:1:exon
so has part: feature:6475331-6475482:1:exon
so has part: feature:6476338-6478305:1:exon

position:6460701:1
position: 6460701
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6460701-6460827:1:exon

position:6460827:1
position: 6460827
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:6463776-6463841:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6464218-6464351:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6466347-6466451:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6467776-6467821:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:6470057-6470165:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:6471568-6471676:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:6475331-6475482:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:6476338-6478305:1:exon

IMPA1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 419612
gene: IMPA1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: inositol monophosphatase 1
translation: MADPWQECMDYAVTLARKAGEVVREALKNERNIMIKSSPVDLVTATDQKVEKMLISSIKEKYPSHSFIGEESVAAGEKSILTDNPTWIIDPIDGTTNFVHGFPFVAVSIGFVVNKKMEFGIVYSCMEDKMYTGRKGRGAFCNGQKLQVSHQEDVTKSLLMTELGSSRTPETLRIILSNMERLLCLPIHGIRGVGTAALNMCLVAAGYADAYYEMGIHCWDVAGAGIIVTEAGGVLMDVTGGPFDMMSRRIIASSNKTLAERIAKEIQIIPLQRDDED
SIO_010081: IMPA1
subclass of: SO_0000673
so part of: IMPA1
location: join(6463779..6463841,6464218..6464351,6466347..6466451,6467776..6467821,6470057..6470165,6471568..6471676,6475331..6475482,6476338..6476453)
location: region:6463779-6476453:1
so has part: feature:6463779-6463841:1:exon
so has part: feature:6464218-6464351:1:exon
so has part: feature:6466347-6466451:1:exon
so has part: feature:6467776-6467821:1:exon
so has part: feature:6470057-6470165:1:exon
so has part: feature:6471568-6471676:1:exon
so has part: feature:6475331-6475482:1:exon
so has part: feature:6476338-6476453:1:exon

XP_032326206.1
type: Protein
SIO_000068: ncbiprotein

position:6476453:1
position: 6476453
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6463779-6463841:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6464218-6464351:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6466347-6466451:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6467776-6467821:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6470057-6470165:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:6471568-6471676:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:6475331-6475482:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:6476338-6476453:1:exon

IMPA1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 419612
gene: IMPA1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: inositol monophosphatase 1
translation: MADPWQECMDYAVTLARKAGEVVREALKNERNIMIKSSPVDLVTATDQKVEKMLISSIKEKYPSHSFIGEESVAAGEKSILTDNPTWIIDPIDGTTNFVHGFPFVAVSIGFVVNKKMEFGIVYSCMEDKMYTGRKGRGAFCNGQKLQVSHQEDVTKSLLMTELGSSRTPETLRIILSNMERLLCLPIHGIRGVGTAALNMCLVAAGYADAYYEMGIHCWDVAGAGIIVTEAGGVLMDVTGGPFDMMSRRIIASSNKTLAERIAKEIQIIPLQRDDED
SIO_010081: IMPA1
subclass of: SO_0000673
so part of: IMPA1
location: join(6463779..6463841,6464218..6464351,6466347..6466451,6467776..6467821,6470057..6470165,6471568..6471676,6475331..6475482,6476338..6476453)
location: region:6463779-6476453:1
so has part: feature:6463779-6463841:1:exon
so has part: feature:6464218-6464351:1:exon
so has part: feature:6466347-6466451:1:exon
so has part: feature:6467776-6467821:1:exon
so has part: feature:6470057-6470165:1:exon
so has part: feature:6471568-6471676:1:exon
so has part: feature:6475331-6475482:1:exon
so has part: feature:6476338-6476453:1:exon

XP_032326207.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:6463779-6463841:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6464218-6464351:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6466347-6466451:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6467776-6467821:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6470057-6470165:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:6471568-6471676:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:6475331-6475482:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:6476338-6476453:1:exon

IMPA1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 419612
gene: IMPA1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: inositol monophosphatase 1
translation: MADPWQECMDYAVTLARKAGEVVREALKNERNIMIKSSPVDLVTATDQKVEKMLISSIKEKYPSHSFIGEESVAAGEKSILTDNPTWIIDPIDGTTNFVHGFPFVAVSIGFVVNKKMEFGIVYSCMEDKMYTGRKGRGAFCNGQKLQVSHQEDVTKSLLMTELGSSRTPETLRIILSNMERLLCLPIHGIRGVGTAALNMCLVAAGYADAYYEMGIHCWDVAGAGIIVTEAGGVLMDVTGGPFDMMSRRIIASSNKTLAERIAKEIQIIPLQRDDED
SIO_010081: IMPA1
subclass of: SO_0000673
so part of: IMPA1
location: join(6463779..6463841,6464218..6464351,6466347..6466451,6467776..6467821,6470057..6470165,6471568..6471676,6475331..6475482,6476338..6476453)
location: region:6463779-6476453:1
so has part: feature:6463779-6463841:1:exon
so has part: feature:6464218-6464351:1:exon
so has part: feature:6466347-6466451:1:exon
so has part: feature:6467776-6467821:1:exon
so has part: feature:6470057-6470165:1:exon
so has part: feature:6471568-6471676:1:exon
so has part: feature:6475331-6475482:1:exon
so has part: feature:6476338-6476453:1:exon

XP_032326208.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:6463779-6463841:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6464218-6464351:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6466347-6466451:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6467776-6467821:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6470057-6470165:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:6471568-6471676:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:6475331-6475482:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:6476338-6476453:1:exon

IMPA1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 419612
gene: IMPA1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: inositol monophosphatase 1
translation: MADPWQECMDYAVTLARKAGEVVREALKNERNIMIKSSPVDLVTATDQKVEKMLISSIKEKYPSHSFIGEESVAAGEKSILTDNPTWIIDPIDGTTNFVHGFPFVAVSIGFVVNKKMEFGIVYSCMEDKMYTGRKGRGAFCNGQKLQVSHQEDVTKSLLMTELGSSRTPETLRIILSNMERLLCLPIHGIRGVGTAALNMCLVAAGYADAYYEMGIHCWDVAGAGIIVTEAGGVLMDVTGGPFDMMSRRIIASSNKTLAERIAKEIQIIPLQRDDED
SIO_010081: IMPA1
subclass of: SO_0000673
so part of: IMPA1
location: join(6463779..6463841,6464218..6464351,6466347..6466451,6467776..6467821,6470057..6470165,6471568..6471676,6475331..6475482,6476338..6476453)
location: region:6463779-6476453:1
so has part: feature:6463779-6463841:1:exon
so has part: feature:6464218-6464351:1:exon
so has part: feature:6466347-6466451:1:exon
so has part: feature:6467776-6467821:1:exon
so has part: feature:6470057-6470165:1:exon
so has part: feature:6471568-6471676:1:exon
so has part: feature:6475331-6475482:1:exon
so has part: feature:6476338-6476453:1:exon

XP_032326209.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:6463779-6463841:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6464218-6464351:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6466347-6466451:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6467776-6467821:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6470057-6470165:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:6471568-6471676:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:6475331-6475482:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:6476338-6476453:1:exon

LOC116660539
type: Gene
subclass of: SO_0000704
RO_0002162: 419612
gene: LOC116660539
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(6512356..6611184)
location: region:6512356-6611184:-1
so has part: feature:6512356-6611184:-1:exon
subclass of: SO_0000011

116660539
type: Gene
SIO_000068: ncbigene

position:6512356:-1
position: 6512356
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6611184:-1
position: 6611184
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6512356-6611184:-1:exon

LOC116660539
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 419612
nc RNA class: lncRNA
gene: LOC116660539
product: uncharacterized LOC116660539, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XR_004316133.1
SIO_010081: LOC116660539
subclass of: SO_0000673
so part of: LOC116660539
location: complement(join(6512356..6512577,6528924..6529020,6603175..6603275,6610329..6610420,6610771..6611184))
location: region:6512356-6611184:-1
so has part: feature:6610771-6611184:-1:exon
so has part: feature:6610329-6610420:-1:exon
so has part: feature:6603175-6603275:-1:exon
so has part: feature:6528924-6529020:-1:exon
so has part: feature:6512356-6512577:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6610771-6611184:-1:exon

position:6610771:-1
position: 6610771
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:6610329-6610420:-1:exon

position:6610329:-1
position: 6610329
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6610420:-1
position: 6610420
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:6603175-6603275:-1:exon

position:6603175:-1
position: 6603175
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6603275:-1
position: 6603275
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:6528924-6529020:-1:exon

position:6528924:-1
position: 6528924
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6529020:-1
position: 6529020
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:6512356-6512577:-1:exon

position:6512577:-1
position: 6512577
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC116660539
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 419612
nc RNA class: lncRNA
gene: LOC116660539
product: uncharacterized LOC116660539, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XR_004316134.1
SIO_010081: LOC116660539
subclass of: SO_0000673
so part of: LOC116660539
location: complement(join(6520842..6521213,6528924..6529020,6603175..6603275,6610329..6610420,6610771..6611184))
location: region:6520842-6611184:-1
so has part: feature:6610771-6611184:-1:exon
so has part: feature:6610329-6610420:-1:exon
so has part: feature:6603175-6603275:-1:exon
so has part: feature:6528924-6529020:-1:exon
so has part: feature:6520842-6521213:-1:exon

position:6520842:-1
position: 6520842
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6610771-6611184:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6610329-6610420:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6603175-6603275:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6528924-6529020:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6520842-6521213:-1:exon

position:6521213:-1
position: 6521213
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC116660539
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 419612
nc RNA class: lncRNA
gene: LOC116660539
product: uncharacterized LOC116660539, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XR_004316131.1
SIO_010081: LOC116660539
subclass of: SO_0000673
so part of: LOC116660539
location: complement(join(6520842..6521213,6522828..6522920,6524850..6524966,6528924..6529020,6603175..6603275,6610329..6610420,6610771..6611184))
location: region:6520842-6611184:-1
so has part: feature:6610771-6611184:-1:exon
so has part: feature:6610329-6610420:-1:exon
so has part: feature:6603175-6603275:-1:exon
so has part: feature:6528924-6529020:-1:exon
so has part: feature:6524850-6524966:-1:exon
so has part: feature:6522828-6522920:-1:exon
so has part: feature:6520842-6521213:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6610771-6611184:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6610329-6610420:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6603175-6603275:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6528924-6529020:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6524850-6524966:-1:exon

position:6524850:-1
position: 6524850
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6524966:-1
position: 6524966
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:6522828-6522920:-1:exon

position:6522828:-1
position: 6522828
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6522920:-1
position: 6522920
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:6520842-6521213:-1:exon

LOC102505504
type: Gene
subclass of: SO_0000704
RO_0002162: 419612
gene: LOC102505504
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 6542598..6546823
location: region:6542598-6546823:1
so has part: feature:6542598-6546823:1:exon
subclass of: SO_0000010

102505504
type: Gene
SIO_000068: ncbigene

position:6542598:1
position: 6542598
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6546823:1
position: 6546823
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6542598-6546823:1:exon

LOC102505504
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 419612
gene: LOC102505504
product: fatty acid-binding protein, adipocyte
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 17 mRNAs, 54 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 38 samples with support for all annotated introns
transcript id: XM_006193930.2
SIO_010081: LOC102505504
subclass of: SO_0000673
so part of: LOC102505504
location: join(6542598..6542755,6545236..6545408,6546029..6546130,6546598..6546823)
location: region:6542598-6546823:1
so has part: feature:6542598-6542755:1:exon
so has part: feature:6545236-6545408:1:exon
so has part: feature:6546029-6546130:1:exon
so has part: feature:6546598-6546823:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6542598-6542755:1:exon

position:6542755:1
position: 6542755
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:6545236-6545408:1:exon

position:6545236:1
position: 6545236
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6545408:1
position: 6545408
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:6546029-6546130:1:exon

position:6546029:1
position: 6546029
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6546130:1
position: 6546130
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:6546598-6546823:1:exon

position:6546598:1
position: 6546598
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC102505504
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 419612
gene: LOC102505504
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: fatty acid-binding protein, adipocyte
translation: MCDAFVGTWKLVSSENFDDYMKEVGVGFATRKVAGMAKPNVTISVNGDVINIKSESTFKNTEISFQLGQEFDEVTADDRKVKSIVTLEGGALVQVQKWDGKSTTIKRKLVDDKLVVECIMKDVISTRVYEKA
SIO_010081: LOC102505504
subclass of: SO_0000673
so part of: LOC102505504
location: join(6542683..6542755,6545236..6545408,6546029..6546130,6546598..6546648)
location: region:6542683-6546648:1
so has part: feature:6542683-6542755:1:exon
so has part: feature:6545236-6545408:1:exon
so has part: feature:6546029-6546130:1:exon
so has part: feature:6546598-6546648:1:exon

XP_006193992.1
type: Protein
SIO_000068: ncbiprotein

position:6542683:1
position: 6542683
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6546648:1
position: 6546648
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6542683-6542755:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6545236-6545408:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6546029-6546130:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6546598-6546648:1:exon

LOC102505254
type: Gene
subclass of: SO_0000704
RO_0002162: 419612
gene: LOC102505254
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 6550347..6554039
location: region:6550347-6554039:1
so has part: feature:6550347-6554039:1:exon
subclass of: SO_0000010

102505254
type: Gene
SIO_000068: ncbigene

position:6550347:1
position: 6550347
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6554039:1
position: 6554039
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6550347-6554039:1:exon

LOC102505254
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 419612
gene: LOC102505254
product: fatty acid-binding protein 9
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 16 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
transcript id: XM_006193929.3
SIO_010081: LOC102505254
subclass of: SO_0000673
so part of: LOC102505254
location: join(6550347..6550492,6552959..6553131,6553584..6553685,6553852..6554039)
location: region:6550347-6554039:1
so has part: feature:6550347-6550492:1:exon
so has part: feature:6552959-6553131:1:exon
so has part: feature:6553584-6553685:1:exon
so has part: feature:6553852-6554039:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6550347-6550492:1:exon

position:6550492:1
position: 6550492
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:6552959-6553131:1:exon

position:6552959:1
position: 6552959
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6553131:1
position: 6553131
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:6553584-6553685:1:exon

position:6553584:1
position: 6553584
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6553685:1
position: 6553685
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:6553852-6554039:1:exon

position:6553852:1
position: 6553852
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC102505254
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 419612
gene: LOC102505254
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: fatty acid-binding protein 9
translation: MIEHFLGTWKLVSSENFEEYLKQLGMSVTDQNLAGLAKPRITISADKEKVNIKTESSFKNFEISFKLGEEFDETTADNRKVKSIVKLDGGSMIHVQKWLDKETTIKRRIVDGKMVVEYTMNNIVSTRIYRKSVKKVSTAVKTCSLTGNWDLKKICLRARDLKKKHSA
SIO_010081: LOC102505254
subclass of: SO_0000673
so part of: LOC102505254
location: join(6550420..6550492,6552959..6553131,6553584..6553685,6553852..6554007)
location: region:6550420-6554007:1
so has part: feature:6550420-6550492:1:exon
so has part: feature:6552959-6553131:1:exon
so has part: feature:6553584-6553685:1:exon
so has part: feature:6553852-6554007:1:exon

XP_006193991.2
type: Protein
SIO_000068: ncbiprotein

position:6550420:1
position: 6550420
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6554007:1
position: 6554007
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6550420-6550492:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6552959-6553131:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6553584-6553685:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6553852-6554007:1:exon

LOC116660539
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 419612
nc RNA class: lncRNA
gene: LOC116660539
product: uncharacterized LOC116660539, transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XR_004316136.1
SIO_010081: LOC116660539
subclass of: SO_0000673
so part of: LOC116660539
location: complement(join(6554146..6554253,6603175..6603275,6610329..6610420,6610771..6611184))
location: region:6554146-6611184:-1
so has part: feature:6610771-6611184:-1:exon
so has part: feature:6610329-6610420:-1:exon
so has part: feature:6603175-6603275:-1:exon
so has part: feature:6554146-6554253:-1:exon

position:6554146:-1
position: 6554146
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6610771-6611184:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6610329-6610420:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6603175-6603275:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6554146-6554253:-1:exon

position:6554253:-1
position: 6554253
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC102504988
type: Gene
subclass of: SO_0000704
RO_0002162: 419612
gene: LOC102504988
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 6560579..6568544
location: region:6560579-6568544:1
so has part: feature:6560579-6568544:1:exon
subclass of: SO_0000010

102504988
type: Gene
SIO_000068: ncbigene

position:6560579:1
position: 6560579
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6568544:1
position: 6568544
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6560579-6568544:1:exon

LOC102504988
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 419612
gene: LOC102504988
product: myelin P2 protein, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 37 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_006193928.3
SIO_010081: LOC102504988
subclass of: SO_0000673
so part of: LOC102504988
location: join(6560579..6561273,6563148..6563392,6565794..6565966,6566183..6566284,6567346..6568544)
location: region:6560579-6568544:1
so has part: feature:6560579-6561273:1:exon
so has part: feature:6563148-6563392:1:exon
so has part: feature:6565794-6565966:1:exon
so has part: feature:6566183-6566284:1:exon
so has part: feature:6567346-6568544:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6560579-6561273:1:exon

position:6561273:1
position: 6561273
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:6563148-6563392:1:exon

position:6563148:1
position: 6563148
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6563392:1
position: 6563392
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:6565794-6565966:1:exon

position:6565794:1
position: 6565794
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6565966:1
position: 6565966
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:6566183-6566284:1:exon

position:6566183:1
position: 6566183
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6566284:1
position: 6566284
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:6567346-6568544:1:exon

position:6567346:1
position: 6567346
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC102504988
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 419612
gene: LOC102504988
product: myelin P2 protein, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 37 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_032470322.1
SIO_010081: LOC102504988
subclass of: SO_0000673
so part of: LOC102504988
location: join(6561596..6561852,6563148..6563392,6565794..6565966,6566183..6566284,6567346..6568544)
location: region:6561596-6568544:1
so has part: feature:6561596-6561852:1:exon
so has part: feature:6563148-6563392:1:exon
so has part: feature:6565794-6565966:1:exon
so has part: feature:6566183-6566284:1:exon
so has part: feature:6567346-6568544:1:exon

position:6561596:1
position: 6561596
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6561596-6561852:1:exon

position:6561852:1
position: 6561852
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:6563148-6563392:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6565794-6565966:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6566183-6566284:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6567346-6568544:1:exon

LOC102504988
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 419612
gene: LOC102504988
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: myelin P2 protein
translation: MTNKFLGTWKLVSSEHFDDYMKALGVGLATRKLGNLAKPRVIISKKGDIITIRTESTFKNTEISFKLGQEFEETTADNRKAKSILTLSRGSLNQVQRWDDNETTIKRKLVDGKMVVECKMKDVVCTRIYEKV
SIO_010081: LOC102504988
subclass of: SO_0000673
so part of: LOC102504988
location: join(6563320..6563392,6565794..6565966,6566183..6566284,6567346..6567396)
location: region:6563320-6567396:1
so has part: feature:6563320-6563392:1:exon
so has part: feature:6565794-6565966:1:exon
so has part: feature:6566183-6566284:1:exon
so has part: feature:6567346-6567396:1:exon

XP_032326213.1
type: Protein
SIO_000068: ncbiprotein

position:6563320:1
position: 6563320
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6567396:1
position: 6567396
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6563320-6563392:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6565794-6565966:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6566183-6566284:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6567346-6567396:1:exon

LOC102504988
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 419612
gene: LOC102504988
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: myelin P2 protein
translation: MTNKFLGTWKLVSSEHFDDYMKALGVGLATRKLGNLAKPRVIISKKGDIITIRTESTFKNTEISFKLGQEFEETTADNRKAKSILTLSRGSLNQVQRWDDNETTIKRKLVDGKMVVECKMKDVVCTRIYEKV
SIO_010081: LOC102504988
subclass of: SO_0000673
so part of: LOC102504988
location: join(6563320..6563392,6565794..6565966,6566183..6566284,6567346..6567396)
location: region:6563320-6567396:1
so has part: feature:6563320-6563392:1:exon
so has part: feature:6565794-6565966:1:exon
so has part: feature:6566183-6566284:1:exon
so has part: feature:6567346-6567396:1:exon

XP_006193990.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:6563320-6563392:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6565794-6565966:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6566183-6566284:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6567346-6567396:1:exon

LOC116660539
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 419612
nc RNA class: lncRNA
gene: LOC116660539
product: uncharacterized LOC116660539, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
transcript id: XR_004316132.1
SIO_010081: LOC116660539
subclass of: SO_0000673
so part of: LOC116660539
location: complement(join(6581140..6583643,6603175..6603275,6610329..6610420,6610771..6611184))
location: region:6581140-6611184:-1
so has part: feature:6610771-6611184:-1:exon
so has part: feature:6610329-6610420:-1:exon
so has part: feature:6603175-6603275:-1:exon
so has part: feature:6581140-6583643:-1:exon

position:6581140:-1
position: 6581140
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6610771-6611184:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6610329-6610420:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6603175-6603275:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6581140-6583643:-1:exon

position:6583643:-1
position: 6583643
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC116660539
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 419612
nc RNA class: lncRNA
gene: LOC116660539
product: uncharacterized LOC116660539, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XR_004316135.1
SIO_010081: LOC116660539
subclass of: SO_0000673
so part of: LOC116660539
location: complement(join(6595223..6596925,6603175..6603275,6610329..6610420,6610771..6611184))
location: region:6595223-6611184:-1
so has part: feature:6610771-6611184:-1:exon
so has part: feature:6610329-6610420:-1:exon
so has part: feature:6603175-6603275:-1:exon
so has part: feature:6595223-6596925:-1:exon

position:6595223:-1
position: 6595223
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6610771-6611184:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6610329-6610420:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6603175-6603275:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6595223-6596925:-1:exon

position:6596925:-1
position: 6596925
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC106730892
type: Gene
subclass of: SO_0000704
RO_0002162: 419612
gene: LOC106730892
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(6617087..6619813)
location: region:6617087-6619813:-1
so has part: feature:6617087-6619813:-1:exon
subclass of: SO_0000011

106730892
type: Gene
SIO_000068: ncbigene

position:6617087:-1
position: 6617087
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6619813:-1
position: 6619813
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6617087-6619813:-1:exon

LOC106730892
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 419612
nc RNA class: lncRNA
gene: LOC106730892
product: uncharacterized LOC106730892, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XR_004315919.1
SIO_010081: LOC106730892
subclass of: SO_0000673
so part of: LOC106730892
location: complement(join(6617087..6617703,6617980..6618843,6619305..6619402,6619547..6619813))
location: region:6617087-6619813:-1
so has part: feature:6619547-6619813:-1:exon
so has part: feature:6619305-6619402:-1:exon
so has part: feature:6617980-6618843:-1:exon
so has part: feature:6617087-6617703:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6619547-6619813:-1:exon

position:6619547:-1
position: 6619547
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:6619305-6619402:-1:exon

position:6619305:-1
position: 6619305
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6619402:-1
position: 6619402
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:6617980-6618843:-1:exon

position:6617980:-1
position: 6617980
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6618843:-1
position: 6618843
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:6617087-6617703:-1:exon

position:6617703:-1
position: 6617703
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC106730892
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 419612
nc RNA class: lncRNA
gene: LOC106730892
product: uncharacterized LOC106730892, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 13 samples with support for all annotated introns
transcript id: XR_001367336.2
SIO_010081: LOC106730892
subclass of: SO_0000673
so part of: LOC106730892
location: complement(join(6617093..6617703,6617980..6618037,6619305..6619402,6619547..6619765))
location: region:6617093-6619765:-1
so has part: feature:6619547-6619765:-1:exon
so has part: feature:6619305-6619402:-1:exon
so has part: feature:6617980-6618037:-1:exon
so has part: feature:6617093-6617703:-1:exon

position:6617093:-1
position: 6617093
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6619765:-1
position: 6619765
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6619547-6619765:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6619305-6619402:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6617980-6618037:-1:exon

position:6618037:-1
position: 6618037
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:6617093-6617703:-1:exon

LOC106730892
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 419612
nc RNA class: lncRNA
gene: LOC106730892
product: uncharacterized LOC106730892, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 15 samples with support for all annotated introns
transcript id: XR_001367337.2
SIO_010081: LOC106730892
subclass of: SO_0000673
so part of: LOC106730892
location: complement(join(6617094..6617703,6617980..6618037,6619305..6619402,6619607..6619761))
location: region:6617094-6619761:-1
so has part: feature:6619607-6619761:-1:exon
so has part: feature:6619305-6619402:-1:exon
so has part: feature:6617980-6618037:-1:exon
so has part: feature:6617094-6617703:-1:exon

position:6617094:-1
position: 6617094
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6619761:-1
position: 6619761
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6619607-6619761:-1:exon

position:6619607:-1
position: 6619607
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:6619305-6619402:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6617980-6618037:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6617094-6617703:-1:exon

FABP5
type: Gene
subclass of: SO_0000704
RO_0002162: 419612
gene: FABP5
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(6645281..6650115)
location: region:6645281-6650115:-1
so has part: feature:6645281-6650115:-1:exon
subclass of: SO_0000010

102504731
type: Gene
SIO_000068: ncbigene

position:6645281:-1
position: 6645281
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6650115:-1
position: 6650115
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6645281-6650115:-1:exon

FABP5
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 419612
gene: FABP5
product: fatty acid binding protein 5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 47 samples with support for all annotated introns
transcript id: XM_006193927.3
SIO_010081: FABP5
subclass of: SO_0000673
so part of: FABP5
location: complement(join(6645281..6645533,6646793..6646894,6647258..6647430,6649958..6650115))
location: region:6645281-6650115:-1
so has part: feature:6649958-6650115:-1:exon
so has part: feature:6647258-6647430:-1:exon
so has part: feature:6646793-6646894:-1:exon
so has part: feature:6645281-6645533:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6649958-6650115:-1:exon

position:6649958:-1
position: 6649958
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:6647258-6647430:-1:exon

position:6647258:-1
position: 6647258
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6647430:-1
position: 6647430
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:6646793-6646894:-1:exon

position:6646793:-1
position: 6646793
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6646894:-1
position: 6646894
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:6645281-6645533:-1:exon

position:6645533:-1
position: 6645533
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

FABP5
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 419612
gene: FABP5
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: fatty acid-binding protein 5
translation: MATIQQLVGRWRLVESKGFDEYMKEVGVGMALRKMGAMAKPDCIITFDGKNLSIKTESTLKTTQFSCSLGEKFEETTADGRKTQTVCNFTDGALVQHQEWDGKESTITRRLENGKLVVECVMNNVTSTRVYEKVE
SIO_010081: FABP5
subclass of: SO_0000673
so part of: FABP5
location: complement(join(6645480..6645533,6646793..6646894,6647258..6647430,6649958..6650036))
location: region:6645480-6650036:-1
so has part: feature:6649958-6650036:-1:exon
so has part: feature:6647258-6647430:-1:exon
so has part: feature:6646793-6646894:-1:exon
so has part: feature:6645480-6645533:-1:exon

XP_006193989.1
type: Protein
SIO_000068: ncbiprotein

position:6645480:-1
position: 6645480
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6650036:-1
position: 6650036
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6649958-6650036:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6647258-6647430:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6646793-6646894:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6645480-6645533:-1:exon

LOC116660546
type: Gene
subclass of: SO_0000704
RO_0002162: 419612
gene: LOC116660546
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: complement(6705620..6705726)
location: region:6705620-6705726:-1
so has part: feature:6705620-6705726:-1:exon
subclass of: SO_0000623

116660546
type: Gene
SIO_000068: ncbigene

position:6705620:-1
position: 6705620
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6705726:-1
position: 6705726
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6705620-6705726:-1:exon

LOC116660546
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 419612
nc RNA class: snRNA
gene: LOC116660546
product: U6 spliceosomal RNA
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00026
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_004316142.1
SIO_010081: LOC116660546
subclass of: SO_0000673
so part of: LOC116660546
location: complement(6705620..6705726)
location: region:6705620-6705726:-1
so has part: feature:6705620-6705726:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6705620-6705726:-1:exon

PAG1
type: Gene
subclass of: SO_0000704
RO_0002162: 419612
gene: PAG1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 6816302..6891203
location: region:6816302-6891203:1
so has part: feature:6816302-6891203:1:exon
subclass of: SO_0000010

102504478
type: Gene
SIO_000068: ncbigene

position:6816302:1
position: 6816302
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6891203:1
position: 6891203
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6816302-6891203:1:exon

PAG1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 419612
gene: PAG1
product: phosphoprotein membrane anchor with glycosphingolipid microdomains 1
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_006193926.3
SIO_010081: PAG1
subclass of: SO_0000673
so part of: PAG1
location: join(6816302..6817352,6833571..6833665,6865866..6866075,6867748..6867799,6871294..6871390,6873935..6874540,6878523..6878582,6882474..6891203)
location: region:6816302-6891203:1
so has part: feature:6816302-6817352:1:exon
so has part: feature:6833571-6833665:1:exon
so has part: feature:6865866-6866075:1:exon
so has part: feature:6867748-6867799:1:exon
so has part: feature:6871294-6871390:1:exon
so has part: feature:6873935-6874540:1:exon
so has part: feature:6878523-6878582:1:exon
so has part: feature:6882474-6891203:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6816302-6817352:1:exon

position:6817352:1
position: 6817352
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:6833571-6833665:1:exon

position:6833571:1
position: 6833571
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6833665:1
position: 6833665
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:6865866-6866075:1:exon

position:6865866:1
position: 6865866
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6866075:1
position: 6866075
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:6867748-6867799:1:exon

position:6867748:1
position: 6867748
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6867799:1
position: 6867799
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:6871294-6871390:1:exon

position:6871294:1
position: 6871294
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6871390:1
position: 6871390
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:6873935-6874540:1:exon

position:6873935:1
position: 6873935
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6874540:1
position: 6874540
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:6878523-6878582:1:exon

position:6878523:1
position: 6878523
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6878582:1
position: 6878582
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:6882474-6891203:1:exon

position:6882474:1
position: 6882474
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

PAG1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 419612
gene: PAG1
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: phosphoprotein associated with glycosphingolipid-enriched microdomains 1
translation: MGPEGSMLSGGPTQILLWGSLAAVAAFFLIIFLVFLCSSCDREKKPRPHSGDHETLMNVPSDKEVFSRSVTSLATDAPVSSEQNGALTNGDILSEDSAMTCMQHYEEVQTSASDLLDSQDSTGKPKCHQSRELPRIPPESAVDTMLNERCADADQGLGMEGPYEVLKDSSSQENMVEDCLYETVKEIKDMAAAAHPGQGHSSRSKSTSALKELPGPQVNGKTNFAEYASVDRNKKCRQSVNADAVLGNACDPEEEAPPPVPVKLLDENENLQEKAESTGEEESALEGTSETNKRLSALSYKSREDDPTLTEEEISAMYSSVNKQGQAGNKSGQSLKALESSYPSVPGAAQRSPSSGNHLYATVKDFEKTPSGGGGALPPTAGRPSEGPEPDYEAIPTLNREEEKAAPDASSHRGPFPKENDYESIGDMQPCRDVTRL
SIO_010081: PAG1
subclass of: SO_0000673
so part of: PAG1
location: join(6865951..6866075,6867748..6867799,6871294..6871390,6873935..6874540,6878523..6878582,6882474..6882848)
location: region:6865951-6882848:1
so has part: feature:6865951-6866075:1:exon
so has part: feature:6867748-6867799:1:exon
so has part: feature:6871294-6871390:1:exon
so has part: feature:6873935-6874540:1:exon
so has part: feature:6878523-6878582:1:exon
so has part: feature:6882474-6882848:1:exon

XP_006193988.1
type: Protein
SIO_000068: ncbiprotein

position:6865951:1
position: 6865951
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6882848:1
position: 6882848
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6865951-6866075:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6867748-6867799:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6871294-6871390:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6873935-6874540:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6878523-6878582:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:6882474-6882848:1:exon

LOC116660474
type: Gene
subclass of: SO_0000704
RO_0002162: 419612
gene: LOC116660474
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(6932774..6941954)
location: region:6932774-6941954:-1
so has part: feature:6932774-6941954:-1:exon
subclass of: SO_0000011

116660474
type: Gene
SIO_000068: ncbigene

position:6932774:-1
position: 6932774
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6941954:-1
position: 6941954
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6932774-6941954:-1:exon

LOC116660474
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 419612
nc RNA class: lncRNA
gene: LOC116660474
product: uncharacterized LOC116660474, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XR_004316021.1
SIO_010081: LOC116660474
subclass of: SO_0000673
so part of: LOC116660474
location: complement(join(6932774..6933243,6938347..6938481,6938692..6938916,6941824..6941954))
location: region:6932774-6941954:-1
so has part: feature:6941824-6941954:-1:exon
so has part: feature:6938692-6938916:-1:exon
so has part: feature:6938347-6938481:-1:exon
so has part: feature:6932774-6933243:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6941824-6941954:-1:exon

position:6941824:-1
position: 6941824
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:6938692-6938916:-1:exon

position:6938692:-1
position: 6938692
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6938916:-1
position: 6938916
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:6938347-6938481:-1:exon

position:6938347:-1
position: 6938347
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6938481:-1
position: 6938481
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:6932774-6933243:-1:exon

position:6933243:-1
position: 6933243
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC116660474
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 419612
nc RNA class: lncRNA
gene: LOC116660474
product: uncharacterized LOC116660474, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XR_004316020.1
SIO_010081: LOC116660474
subclass of: SO_0000673
so part of: LOC116660474
location: complement(join(6938189..6938481,6938692..6938916,6941824..6941954))
location: region:6938189-6941954:-1
so has part: feature:6941824-6941954:-1:exon
so has part: feature:6938692-6938916:-1:exon
so has part: feature:6938189-6938481:-1:exon

position:6938189:-1
position: 6938189
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6941824-6941954:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6938692-6938916:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6938189-6938481:-1:exon

ZNF704
type: Gene
subclass of: SO_0000704
RO_0002162: 419612
gene: ZNF704
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 6958757..7156406
location: region:6958757-7156406:1
so has part: feature:6958757-7156406:1:exon
subclass of: SO_0000010

102510899
type: Gene
SIO_000068: ncbigene

position:6958757:1
position: 6958757
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7156406:1
position: 7156406
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6958757-7156406:1:exon

ZNF704
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 419612
gene: ZNF704
product: zinc finger protein 704
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 2 bases in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_032469957.1
SIO_010081: ZNF704
subclass of: SO_0000673
so part of: ZNF704
location: join(6958757..6959461,7005500..7005741,7095547..7095650,7100318..7100550,7111327..7111389,7130266..7130303,7136062..7136329,7138727..7138831,7142373..7142470,7143564..7156406)
location: region:6958757-7156406:1
so has part: feature:6958757-6959461:1:exon
so has part: feature:7005500-7005741:1:exon
so has part: feature:7095547-7095650:1:exon
so has part: feature:7100318-7100550:1:exon
so has part: feature:7111327-7111389:1:exon
so has part: feature:7130266-7130303:1:exon
so has part: feature:7136062-7136329:1:exon
so has part: feature:7138727-7138831:1:exon
so has part: feature:7142373-7142470:1:exon
so has part: feature:7143564-7156406:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6958757-6959461:1:exon

position:6959461:1
position: 6959461
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:7005500-7005741:1:exon

position:7005500:1
position: 7005500
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7005741:1
position: 7005741
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:7095547-7095650:1:exon

position:7095547:1
position: 7095547
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7095650:1
position: 7095650
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:7100318-7100550:1:exon

position:7100318:1
position: 7100318
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7100550:1
position: 7100550
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:7111327-7111389:1:exon

position:7111327:1
position: 7111327
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7111389:1
position: 7111389
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:7130266-7130303:1:exon

position:7130266:1
position: 7130266
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7130303:1
position: 7130303
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:7136062-7136329:1:exon

position:7136062:1
position: 7136062
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7136329:1
position: 7136329
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:7138727-7138831:1:exon

position:7138727:1
position: 7138727
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7138831:1
position: 7138831
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:7142373-7142470:1:exon

position:7142373:1
position: 7142373
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7142470:1
position: 7142470
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:7143564-7156406:1:exon

position:7143564:1
position: 7143564
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

ZNF704
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 419612
gene: ZNF704
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 2 bases in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: zinc finger protein 704
translation: MQARRLAKRSSLGSRRGSAALQPPGPAPAPAREGALPGLPPPAPGPGPGPGPAPESWRPPLPPPXAAAGTGPPRAAGAAAAAAASSPVLLLLGEEDEEEEGGSRRRRGLGRVQAKPRGGAEEEDDDEEDEDEEVVVEVVDGDDDDEDGEERFVALGPGRALPKGPARGALKVGSVKREMTFTFQPEDLKRDSSKKMSHQHLFPLAMEEDVKTADTKKANRVLDHEKENTRSICLLEQKRKVVSSNIDVPPARKSSEELDMDKVTAAMVLTSLSTSPLVRSPPVRQNEGLSGSWKEAGGVPSSSSSSGYWSWSAPSDQSNPSTPSPPLSADSFKPFRSPAPPDDGIDEAEASNLLFDEPIPRKRKNSMKVMFKCLWKNCGKVLSTAQGIQKHIRTIHLGRAGDSDYSDGEEDFYYTEIKLNTDSVADGLSSLAPVSPSQSLASPPTFPIPDSSRTEAPCAKTETKLMTPLSRSAPTTLYLVHTDHAYQATPPVTIPGSAKFTPNSSSFSISWQSPPVTFTGIPVSPTHSHPVGTGEQRQHTHTVLSSPPRGTVSLRKPRGEGKKCRKVYGMENRDMWCTACRWKKACQRFTD
SIO_010081: ZNF704
subclass of: SO_0000673
so part of: ZNF704
location: join(6958951..6959461,7005500..7005741,7095547..7095650,7100318..7100550,7111327..7111389,7130266..7130303,7136062..7136329,7138727..7138831,7142373..7142470,7143564..7143675)
location: region:6958951-7143675:1
so has part: feature:6958951-6959461:1:exon
so has part: feature:7005500-7005741:1:exon
so has part: feature:7095547-7095650:1:exon
so has part: feature:7100318-7100550:1:exon
so has part: feature:7111327-7111389:1:exon
so has part: feature:7130266-7130303:1:exon
so has part: feature:7136062-7136329:1:exon
so has part: feature:7138727-7138831:1:exon
so has part: feature:7142373-7142470:1:exon
so has part: feature:7143564-7143675:1:exon

XP_032325848.1
type: Protein
SIO_000068: ncbiprotein

position:6958951:1
position: 6958951
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7143675:1
position: 7143675
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6958951-6959461:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7005500-7005741:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7095547-7095650:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7100318-7100550:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:7111327-7111389:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:7130266-7130303:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:7136062-7136329:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:7138727-7138831:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:7142373-7142470:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:7143564-7143675:1:exon

TRNAT-AGU
type: Gene
subclass of: SO_0000704
RO_0002162: 419612
gene: TRNAT-AGU
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
so part of: sequence
location: complement(6979128..6979199)
location: region:6979128-6979199:-1
so has part: feature:6979128-6979199:-1:exon
subclass of: SO_0000663

116660570
type: Gene
SIO_000068: ncbigene

position:6979128:-1
position: 6979128
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6979199:-1
position: 6979199
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6979128-6979199:-1:exon