Camelus ferus isolate YT-003-E chromosome 26, BCGSAC_Cfer_1.0, whole genome shotgun sequence.
type: Entry
definition: Camelus ferus isolate YT-003-E chromosome 26, BCGSAC_Cfer_1.0, whole genome shotgun sequence.
sequence version: NC_045721.1
sequence date: 2020-02-19
sequence: sequence
division: CON
label: NC_045721.1
type: RefSeq
SIO_000068: refseq
dblink: PRJNA605179
dblink: SAMN12102236
keyword: WGS
keyword: RefSeq
source: Camelus ferus (Wild Bactrian camel)
organism: Camelus ferus
taxonomy: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Tylopoda; Camelidae; Camelus.
comment: REFSEQ INFORMATION: The reference sequence is identical to\nCM020793.1.\nAssembly name: BCGSAC_Cfer_1.0\nThe genomic sequence for this RefSeq record is from the\nwhole-genome assembly released by The Bactrian Camels Genome\nSequencing and Analysis Consortium on 2020/01/08. The original\nwhole-genome shotgun project has the accession VSZR00000000.1.\n\n##Genome-Assembly-Data-START##\nAssembly Provider :: The Bactrian Camels Genome Sequencing and\n Analysis Consortium\nAssembly Method :: FALCON v. FEB-2018; LACHESIS v. MAR-2018\nAssembly Name :: BCGSAC_Cfer_1.0\nGenome Representation :: Full\nExpected Final Version :: Yes\nGenome Coverage :: 50.0x\nSequencing Technology :: PacBio Sequel; Hi-C\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI\nAnnotation Status :: Full annotation\nAnnotation Name :: Camelus ferus Annotation Release 102\nAnnotation Version :: 102\nAnnotation Pipeline :: NCBI eukaryotic genome annotation\n pipeline\nAnnotation Software Version :: 8.3\nAnnotation Method :: Best-placed RefSeq; Gnomon\nFeatures Annotated :: Gene; mRNA; CDS; ncRNA\n##Genome-Annotation-Data-END##

sequence
subclass of: SO_0000340
sequence length: 30432573
topology: linear
so has quality: SO_0000987
location: 1..30432573
location: region:1-30432573:1
RO_0002162: 419612

NC_045721
type: RefSeq
SIO_000068: refseq

PRJNA605179
type: BioProject
SIO_000068: bioproject

SAMN12102236
type: BioSample
SIO_000068: biosample

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:30432573:1
position: 30432573
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-30432573:1:source
so part of: sequence
organism: Camelus ferus
mol type: genomic DNA
isolate: YT-003-E
chromosome: 26
sex: male
tissue type: ear skin
country: Mongolia

419612
type: Taxonomy
SIO_000068: taxonomy

LOC116659968
type: Gene
subclass of: SO_0000704
RO_0002162: 419612
gene: LOC116659968
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 182453..229485
location: region:182453-229485:1
so has part: feature:182453-229485:1:exon
subclass of: SO_0000010

116659968
type: Gene
SIO_000068: ncbigene

position:182453:1
position: 182453
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:229485:1
position: 229485
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:182453-229485:1:exon

LOC116659968
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 419612
gene: LOC116659968
product: putative serine protease 47
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_032468380.1
SIO_010081: LOC116659968
subclass of: SO_0000673
so part of: LOC116659968
location: join(182453..182544,186936..187068,206302..206477,206991..207183,221682..221959,224213..224379,228986..229485)
location: region:182453-229485:1
so has part: feature:182453-182544:1:exon
so has part: feature:186936-187068:1:exon
so has part: feature:206302-206477:1:exon
so has part: feature:206991-207183:1:exon
so has part: feature:221682-221959:1:exon
so has part: feature:224213-224379:1:exon
so has part: feature:228986-229485:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:182453-182544:1:exon

position:182544:1
position: 182544
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:186936-187068:1:exon

position:186936:1
position: 186936
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:187068:1
position: 187068
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:206302-206477:1:exon

position:206302:1
position: 206302
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:206477:1
position: 206477
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:206991-207183:1:exon

position:206991:1
position: 206991
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:207183:1
position: 207183
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:221682-221959:1:exon

position:221682:1
position: 221682
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:221959:1
position: 221959
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:224213-224379:1:exon

position:224213:1
position: 224213
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:224379:1
position: 224379
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:228986-229485:1:exon

position:228986:1
position: 228986
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC116659968
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 419612
gene: LOC116659968
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: putative serine protease 47
translation: MPAHTQDPCLVAVTMVIGAWTAPPTRGTPARSFPLWSSRGGAGMQAWTSEPAQSSGSWARARCSWTSYPRRNAAWGLGRHFLSPLLPSLVRKSQFLENYRVLLGNTQLYQHTRHTQKIPVSQIIVYPDFDKFHPFGNDIAMLQLLFPVNFTSYIIPACLPAPCMQLPSNSSCWITGWGMLSEERPLLEPFRLQEGKGGLVENKFCNMLYEQRVGQGRNYSVHEEMLCAGDFSTEKAICRGDSGGPLVCNLTDAWVLVGLASWGLDCRHPIYPSVFTNVSYFIDWMDEIQRLTPLRNAMSAPPQTQFPHQPLQAAGSPGPGTGFVSPQPWPLLLFLLQDPRQALW
SIO_010081: LOC116659968
subclass of: SO_0000673
so part of: LOC116659968
location: join(206399..206477,206991..207183,221682..221959,224213..224379,228986..229303)
location: region:206399-229303:1
so has part: feature:206399-206477:1:exon
so has part: feature:206991-207183:1:exon
so has part: feature:221682-221959:1:exon
so has part: feature:224213-224379:1:exon
so has part: feature:228986-229303:1:exon

XP_032324271.1
type: Protein
SIO_000068: ncbiprotein

position:206399:1
position: 206399
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:229303:1
position: 229303
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:206399-206477:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:206991-207183:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:221682-221959:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:224213-224379:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:228986-229303:1:exon

LOC116659992
type: Gene
subclass of: SO_0000704
RO_0002162: 419612
gene: LOC116659992
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(278537..302272)
location: region:278537-302272:-1
so has part: feature:278537-302272:-1:exon
subclass of: SO_0000011

116659992
type: Gene
SIO_000068: ncbigene

position:278537:-1
position: 278537
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:302272:-1
position: 302272
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:278537-302272:-1:exon

LOC116659992
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 419612
nc RNA class: lncRNA
gene: LOC116659992
product: uncharacterized LOC116659992
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XR_004315328.1
SIO_010081: LOC116659992
subclass of: SO_0000673
so part of: LOC116659992
location: complement(join(278537..279177,279278..279321,297427..297531,300265..300381,302213..302272))
location: region:278537-302272:-1
so has part: feature:302213-302272:-1:exon
so has part: feature:300265-300381:-1:exon
so has part: feature:297427-297531:-1:exon
so has part: feature:279278-279321:-1:exon
so has part: feature:278537-279177:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:302213-302272:-1:exon

position:302213:-1
position: 302213
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:300265-300381:-1:exon

position:300265:-1
position: 300265
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:300381:-1
position: 300381
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:297427-297531:-1:exon

position:297427:-1
position: 297427
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:297531:-1
position: 297531
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:279278-279321:-1:exon

position:279278:-1
position: 279278
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:279321:-1
position: 279321
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:278537-279177:-1:exon

position:279177:-1
position: 279177
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC116659975
type: Gene
subclass of: SO_0000704
RO_0002162: 419612
gene: LOC116659975
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 305321..309848
location: region:305321-309848:1
so has part: feature:305321-309848:1:exon
subclass of: SO_0000010

116659975
type: Gene
SIO_000068: ncbigene

position:305321:1
position: 305321
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:309848:1
position: 309848
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:305321-309848:1:exon

LOC116659975
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 419612
gene: LOC116659975
product: serine/arginine repetitive matrix protein 1-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins
transcript id: XM_032468387.1
SIO_010081: LOC116659975
subclass of: SO_0000673
so part of: LOC116659975
location: join(305321..305338,306556..307879,307926..308912,309247..309439,309827..309848)
location: region:305321-309848:1
so has part: feature:305321-305338:1:exon
so has part: feature:306556-307879:1:exon
so has part: feature:307926-308912:1:exon
so has part: feature:309247-309439:1:exon
so has part: feature:309827-309848:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:305321-305338:1:exon

position:305338:1
position: 305338
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:306556-307879:1:exon

position:306556:1
position: 306556
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:307879:1
position: 307879
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:307926-308912:1:exon

position:307926:1
position: 307926
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:308912:1
position: 308912
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:309247-309439:1:exon

position:309247:1
position: 309247
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:309439:1
position: 309439
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:309827-309848:1:exon

position:309827:1
position: 309827
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC116659975
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 419612
gene: LOC116659975
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: serine/arginine repetitive matrix protein 1-like
translation: MIELPQPPKPTKTTPPQRPSRSSCPRRSSRSSRSSRRTNLSRRRSRAAEAAQDAQAYQASQTSQAAQADKAADATPLKPLKPLKLPKPPKPPKALKTTKPLKPLKTPKPPKSLKTPKPLKPPPPQSSSRCPSRSSRSSCQSRLSRPSRSRRRRHTAQAAQPLWPPKPTKPPSPQRSSRSRRPSRRRHNARAAQDAQAAAATTIKPLKCPSRRPSRSSRLSRSGRPSRSRRRTNLSRRKATPLKPPKPLRPPKPLKPLKPLKLPKPLKPPKPLKPPPPPRSSRSSCTRRSRRPSRSSRSSRPSRTSRTRRSSRPKRSSRSGRPSRSSRPSRSSRPSGRRHNAQAAQAAQADAQAAQASAATPVKTPKPLKPPKPTKPPPPKSLIRTSHTSRRRHKAQDADQAAAQAAQAAQAAQAAQAAQAAAATTLKPLKLHNPPPKAPKAPPPHRSTPKPLKPPPPPRSSRSSCPRRRPSRSSRSSRSGRPSRSSRAQTSQDAEAAPLKTPKPLRPPKPLKPLKPPKPQPPKTPKPPPPPRSSRSSCTRRSRRPSRFKPPPPQRSSRPRRPSRSRRPNRSSRRRHKAQAAAQAAAQAAQDAQAAKAAQAAQAAAATTLKPLKLHKPTHKPLKPSPPHRSSRSSRSSRPSRRRPSRSSAQATEAAAATKLKPLPKPSTKPLKPLRPPKPPRPPKPPKPHKPLRPPKPLKPLKPPKPPKPLKPPKPPPPPRSSRSSHTSRSSRPSGRRHNARAAQAAQAAAQAAAQAAAQAAQATQAAAATPLKPLTAQASPAGSATCTPPPAPPYLPGGGSRGDGKRQPSPQAAFFFGSWPRRIQLPLGFHNLWVGSRVRGTPNIPK
SIO_010081: LOC116659975
subclass of: SO_0000673
so part of: LOC116659975
location: join(305321..305338,306556..307879,307926..308912,309247..309439,309827..309848)
location: region:305321-309848:1
so has part: feature:305321-305338:1:exon
so has part: feature:306556-307879:1:exon
so has part: feature:307926-308912:1:exon
so has part: feature:309247-309439:1:exon
so has part: feature:309827-309848:1:exon

XP_032324278.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:305321-305338:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:306556-307879:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:307926-308912:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:309247-309439:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:309827-309848:1:exon

LOC116659976
type: Gene
subclass of: SO_0000704
RO_0002162: 419612
gene: LOC116659976
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 313717..325914
location: region:313717-325914:1
so has part: feature:313717-325914:1:exon
subclass of: SO_0000010

116659976
type: Gene
SIO_000068: ncbigene

position:313717:1
position: 313717
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:325914:1
position: 325914
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:313717-325914:1:exon

LOC116659976
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 419612
gene: LOC116659976
product: serine/arginine repetitive matrix protein 1-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 96% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_032468388.1
SIO_010081: LOC116659976
subclass of: SO_0000673
so part of: LOC116659976
location: join(313717..313738,314724..318131,320717..320798,325580..325914)
location: region:313717-325914:1
so has part: feature:313717-313738:1:exon
so has part: feature:314724-318131:1:exon
so has part: feature:320717-320798:1:exon
so has part: feature:325580-325914:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:313717-313738:1:exon

position:313738:1
position: 313738
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:314724-318131:1:exon

position:314724:1
position: 314724
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:318131:1
position: 318131
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:320717-320798:1:exon

position:320717:1
position: 320717
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:320798:1
position: 320798
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:325580-325914:1:exon

position:325580:1
position: 325580
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC116659976
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 419612
gene: LOC116659976
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: serine/arginine repetitive matrix protein 1-like
translation: MDKVKSLAPKPPKPPPTNRSTRSSRSSRPSRPSRPSRPSRRPSRSSRPRRRRHNAQAAQAAQAAQAARAAQADAQTSQDAEAAPLKPPKPLRPPKPLKPLKPLKPTKPQTPPRSSRSSCPSRPSRPRRSRRPSRSSRSSRPSRPSRPSRSRRPNRSSRRRHKAQAAAQAAQAAQAAKAAQAVQAAAATTLKPLKLPKPLKPPKPLKATPTHRSSRSTALAAQADQAAAATTLEPLKTPKPPPPQRSSRSSCPSRRPSRASRLSRSGRPSRSRRRTNLSRRKAAPLKPPKPLRPPKPLKPLKPLKLPKPQPPMPPKPPPPPRSSRSSCPRRSRRPSRSSRSSRPSRTSRTRRSSRPKRSSRRRHKAQAAAQAAAQAAQAAQAAKAAQAAQAASATTLKPLKLPKPLKPTKPTKPPPPKPLKPQKPPPTHRSSRSSRPSTSSRPSRSGLPSLSSRSSRPSRQSRSSRSSRRPTTLKPLKLPKPLKPPKPTKPPPPKPLKPQKPPPTHRSRRSSRPSTSSRPSRSGLPSLSSRSSRPSRPRRPSFSERNQNWVLICIYQKSTPMLGGGGSNLVF
SIO_010081: LOC116659976
subclass of: SO_0000673
so part of: LOC116659976
location: join(313717..313738,314724..316417)
location: region:313717-316417:1
so has part: feature:313717-313738:1:exon
so has part: feature:314724-316417:1:exon

XP_032324279.1
type: Protein
SIO_000068: ncbiprotein

position:316417:1
position: 316417
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:313717-313738:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:314724-316417:1:exon

LOC102515958
type: Gene
subclass of: SO_0000704
RO_0002162: 419612
gene: LOC102515958
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: complement(317826..354468)
location: region:317826-354468:-1
so has part: feature:317826-354468:-1:exon

102515958
type: Gene
SIO_000068: ncbigene

position:317826:-1
position: 317826
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:354468:-1
position: 354468
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:317826-354468:-1:exon

LOC102515958
type: Exon
subclass of: SO_0000147
RO_0002162: 419612
gene: LOC102515958
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins
pseudo: true
SIO_010081: LOC102515958
subclass of: SO_0000673
so part of: LOC102515958
location: complement(317826..318068)
location: region:317826-318068:-1
so has part: feature:317826-318068:-1:exon

position:318068:-1
position: 318068
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:317826-318068:-1:exon

LOC102515958
type: Exon
subclass of: SO_0000147
RO_0002162: 419612
gene: LOC102515958
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins
pseudo: true
SIO_010081: LOC102515958
subclass of: SO_0000673
so part of: LOC102515958
location: complement(330478..331632)
location: region:330478-331632:-1
so has part: feature:330478-331632:-1:exon

position:330478:-1
position: 330478
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:331632:-1
position: 331632
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:330478-331632:-1:exon

LOC102515958
type: Exon
subclass of: SO_0000147
RO_0002162: 419612
gene: LOC102515958
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins
pseudo: true
SIO_010081: LOC102515958
subclass of: SO_0000673
so part of: LOC102515958
location: complement(354225..354468)
location: region:354225-354468:-1
so has part: feature:354225-354468:-1:exon

position:354225:-1
position: 354225
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:354225-354468:-1:exon

THAP1
type: Gene
subclass of: SO_0000704
RO_0002162: 419612
gene: THAP1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(423878..431774)
location: region:423878-431774:-1
so has part: feature:423878-431774:-1:exon
subclass of: SO_0000010

102511732
type: Gene
SIO_000068: ncbigene

position:423878:-1
position: 423878
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:431774:-1
position: 431774
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:423878-431774:-1:exon

THAP1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 419612
gene: THAP1
product: THAP domain containing 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 mRNAs, 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 48 samples with support for all annotated introns
transcript id: XM_006188400.2
SIO_010081: THAP1
subclass of: SO_0000673
so part of: THAP1
location: complement(join(423878..426970,427627..427822,431473..431774))
location: region:423878-431774:-1
so has part: feature:431473-431774:-1:exon
so has part: feature:427627-427822:-1:exon
so has part: feature:423878-426970:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:431473-431774:-1:exon

position:431473:-1
position: 431473
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:427627-427822:-1:exon

position:427627:-1
position: 427627
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:427822:-1
position: 427822
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:423878-426970:-1:exon

position:426970:-1
position: 426970
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

THAP1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 419612
gene: THAP1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: THAP domain-containing protein 1
translation: MVQSCSAYGCKNRYDKDKPVSFHKFPLTRPSLCKKWEAAVRRKNFKPTKYSSICSEHFTPDCFKRECNNKLLKENAVPTIFLCTEPHDKKEDPEPPEQQPPPPLSPPISQVDAAIGLLMPPLQTPDNLSVFCDHNYTVEDTMHQRKRIHQLEQQVEKLRKKLKTAQQRCRRQERQLEKLKEVAHFQKEKDDVSERGYVILPNDYFEIVEVPA
SIO_010081: THAP1
subclass of: SO_0000673
so part of: THAP1
location: complement(join(426599..426970,427627..427822,431473..431543))
location: region:426599-431543:-1
so has part: feature:431473-431543:-1:exon
so has part: feature:427627-427822:-1:exon
so has part: feature:426599-426970:-1:exon

XP_006188462.1
type: Protein
SIO_000068: ncbiprotein

position:426599:-1
position: 426599
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:431543:-1
position: 431543
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:431473-431543:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:427627-427822:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:426599-426970:-1:exon

LOC106730083
type: Gene
subclass of: SO_0000704
RO_0002162: 419612
gene: LOC106730083
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 431719..433738
location: region:431719-433738:1
so has part: feature:431719-433738:1:exon
subclass of: SO_0000011

106730083
type: Gene
SIO_000068: ncbigene

position:431719:1
position: 431719
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:433738:1
position: 433738
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:431719-433738:1:exon

LOC106730083
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 419612
nc RNA class: lncRNA
gene: LOC106730083
product: uncharacterized LOC106730083
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 26 samples with support for all annotated introns
transcript id: XR_001366517.2
SIO_010081: LOC106730083
subclass of: SO_0000673
so part of: LOC106730083
location: join(431719..431831,432772..432844,432941..433738)
location: region:431719-433738:1
so has part: feature:431719-431831:1:exon
so has part: feature:432772-432844:1:exon
so has part: feature:432941-433738:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:431719-431831:1:exon

position:431831:1
position: 431831
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:432772-432844:1:exon

position:432772:1
position: 432772
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:432844:1
position: 432844
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:432941-433738:1:exon

position:432941:1
position: 432941
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

RNF170
type: Gene
subclass of: SO_0000704
RO_0002162: 419612
gene: RNF170
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(436259..465902)
location: region:436259-465902:-1
so has part: feature:436259-465902:-1:exon
subclass of: SO_0000010

102511485
type: Gene
SIO_000068: ncbigene

position:436259:-1
position: 436259
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:465902:-1
position: 465902
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:436259-465902:-1:exon

RNF170
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 419612
gene: RNF170
product: ring finger protein 170, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 19 samples with support for all annotated introns
transcript id: XM_032468495.1
SIO_010081: RNF170
subclass of: SO_0000673
so part of: RNF170
location: complement(join(436259..439069,441316..441426,443632..443705,448081..448189,450624..450699,459734..459877,465843..465902))
location: region:436259-465902:-1
so has part: feature:465843-465902:-1:exon
so has part: feature:459734-459877:-1:exon
so has part: feature:450624-450699:-1:exon
so has part: feature:448081-448189:-1:exon
so has part: feature:443632-443705:-1:exon
so has part: feature:441316-441426:-1:exon
so has part: feature:436259-439069:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:465843-465902:-1:exon

position:465843:-1
position: 465843
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:459734-459877:-1:exon

position:459734:-1
position: 459734
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:459877:-1
position: 459877
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:450624-450699:-1:exon

position:450624:-1
position: 450624
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:450699:-1
position: 450699
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:448081-448189:-1:exon

position:448081:-1
position: 448081
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:448189:-1
position: 448189
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:443632-443705:-1:exon

position:443632:-1
position: 443632
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:443705:-1
position: 443705
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:441316-441426:-1:exon

position:441316:-1
position: 441316
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:441426:-1
position: 441426
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:436259-439069:-1:exon

position:439069:-1
position: 439069
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

RNF170
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 419612
gene: RNF170
product: ring finger protein 170, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 18 samples with support for all annotated introns
transcript id: XM_032468494.1
SIO_010081: RNF170
subclass of: SO_0000673
so part of: RNF170
location: complement(join(436259..439069,441316..441426,443632..443705,448081..448189,450624..450699,459734..459877,460569..460644,465843..465860))
location: region:436259-465860:-1
so has part: feature:465843-465860:-1:exon
so has part: feature:460569-460644:-1:exon
so has part: feature:459734-459877:-1:exon
so has part: feature:450624-450699:-1:exon
so has part: feature:448081-448189:-1:exon
so has part: feature:443632-443705:-1:exon
so has part: feature:441316-441426:-1:exon
so has part: feature:436259-439069:-1:exon

position:465860:-1
position: 465860
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:465843-465860:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:460569-460644:-1:exon

position:460569:-1
position: 460569
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:460644:-1
position: 460644
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:459734-459877:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:450624-450699:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:448081-448189:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:443632-443705:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:441316-441426:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:436259-439069:-1:exon

RNF170
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 419612
gene: RNF170
product: ring finger protein 170, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 44 samples with support for all annotated introns
transcript id: XM_032468493.1
SIO_010081: RNF170
subclass of: SO_0000673
so part of: RNF170
location: complement(join(436259..439069,441316..441426,443632..443705,448081..448189,450624..450699,459734..459877,460716..460826,465843..465858))
location: region:436259-465858:-1
so has part: feature:465843-465858:-1:exon
so has part: feature:460716-460826:-1:exon
so has part: feature:459734-459877:-1:exon
so has part: feature:450624-450699:-1:exon
so has part: feature:448081-448189:-1:exon
so has part: feature:443632-443705:-1:exon
so has part: feature:441316-441426:-1:exon
so has part: feature:436259-439069:-1:exon

position:465858:-1
position: 465858
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:465843-465858:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:460716-460826:-1:exon

position:460716:-1
position: 460716
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:460826:-1
position: 460826
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:459734-459877:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:450624-450699:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:448081-448189:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:443632-443705:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:441316-441426:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:436259-439069:-1:exon

RNF170
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 419612
gene: RNF170
product: ring finger protein 170, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 44 samples with support for all annotated introns
transcript id: XM_014562353.2
SIO_010081: RNF170
subclass of: SO_0000673
so part of: RNF170
location: complement(join(436259..439069,441316..441426,443632..443705,448081..448189,450624..450699,459808..459877))
location: region:436259-459877:-1
so has part: feature:459808-459877:-1:exon
so has part: feature:450624-450699:-1:exon
so has part: feature:448081-448189:-1:exon
so has part: feature:443632-443705:-1:exon
so has part: feature:441316-441426:-1:exon
so has part: feature:436259-439069:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:459808-459877:-1:exon

position:459808:-1
position: 459808
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:450624-450699:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:448081-448189:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:443632-443705:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:441316-441426:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:436259-439069:-1:exon

RNF170
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 419612
gene: RNF170
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: E3 ubiquitin-protein ligase RNF170 isoform X1
translation: MAKYQGEVQSLKLDDDSVIEGVSDQVLVAVVVSFALIATLVYALFRNAHQNIHPENQELVRVLREQLQTEQDAPAAARHQFYTDMYCPICLHQASLPVETNCGHLFCGTCIVAYWRYGSWLGAISCPICRQTVTLLLTVFSENDQSQDVVSLHQDINDYNRRFSGQPRSIMERIMDLPTLLRHAFREMFSVGGLFWMFRIRIILCLMGAFFYLISPLDFVPEALFGILGFLDDFFVIFLLLIYISIMYREVITQRLNR
SIO_010081: RNF170
subclass of: SO_0000673
so part of: RNF170
location: complement(join(438800..439069,441316..441426,443632..443705,448081..448189,450624..450699,459734..459870))
location: region:438800-459870:-1
so has part: feature:459734-459870:-1:exon
so has part: feature:450624-450699:-1:exon
so has part: feature:448081-448189:-1:exon
so has part: feature:443632-443705:-1:exon
so has part: feature:441316-441426:-1:exon
so has part: feature:438800-439069:-1:exon

XP_032324384.1
type: Protein
SIO_000068: ncbiprotein

position:438800:-1
position: 438800
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:459870:-1
position: 459870
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:459734-459870:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:450624-450699:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:448081-448189:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:443632-443705:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:441316-441426:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:438800-439069:-1:exon

RNF170
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 419612
gene: RNF170
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: E3 ubiquitin-protein ligase RNF170 isoform X1
translation: MAKYQGEVQSLKLDDDSVIEGVSDQVLVAVVVSFALIATLVYALFRNAHQNIHPENQELVRVLREQLQTEQDAPAAARHQFYTDMYCPICLHQASLPVETNCGHLFCGTCIVAYWRYGSWLGAISCPICRQTVTLLLTVFSENDQSQDVVSLHQDINDYNRRFSGQPRSIMERIMDLPTLLRHAFREMFSVGGLFWMFRIRIILCLMGAFFYLISPLDFVPEALFGILGFLDDFFVIFLLLIYISIMYREVITQRLNR
SIO_010081: RNF170
subclass of: SO_0000673
so part of: RNF170
location: complement(join(438800..439069,441316..441426,443632..443705,448081..448189,450624..450699,459734..459870))
location: region:438800-459870:-1
so has part: feature:459734-459870:-1:exon
so has part: feature:450624-450699:-1:exon
so has part: feature:448081-448189:-1:exon
so has part: feature:443632-443705:-1:exon
so has part: feature:441316-441426:-1:exon
so has part: feature:438800-439069:-1:exon

XP_032324385.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:459734-459870:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:450624-450699:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:448081-448189:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:443632-443705:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:441316-441426:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:438800-439069:-1:exon

RNF170
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 419612
gene: RNF170
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: E3 ubiquitin-protein ligase RNF170 isoform X1
translation: MAKYQGEVQSLKLDDDSVIEGVSDQVLVAVVVSFALIATLVYALFRNAHQNIHPENQELVRVLREQLQTEQDAPAAARHQFYTDMYCPICLHQASLPVETNCGHLFCGTCIVAYWRYGSWLGAISCPICRQTVTLLLTVFSENDQSQDVVSLHQDINDYNRRFSGQPRSIMERIMDLPTLLRHAFREMFSVGGLFWMFRIRIILCLMGAFFYLISPLDFVPEALFGILGFLDDFFVIFLLLIYISIMYREVITQRLNR
SIO_010081: RNF170
subclass of: SO_0000673
so part of: RNF170
location: complement(join(438800..439069,441316..441426,443632..443705,448081..448189,450624..450699,459734..459870))
location: region:438800-459870:-1
so has part: feature:459734-459870:-1:exon
so has part: feature:450624-450699:-1:exon
so has part: feature:448081-448189:-1:exon
so has part: feature:443632-443705:-1:exon
so has part: feature:441316-441426:-1:exon
so has part: feature:438800-439069:-1:exon

XP_032324386.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:459734-459870:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:450624-450699:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:448081-448189:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:443632-443705:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:441316-441426:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:438800-439069:-1:exon

RNF170
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 419612
gene: RNF170
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: E3 ubiquitin-protein ligase RNF170 isoform X2
translation: MYCPICLHQASLPVETNCGHLFCGTCIVAYWRYGSWLGAISCPICRQTVTLLLTVFSENDQSQDVVSLHQDINDYNRRFSGQPRSIMERIMDLPTLLRHAFREMFSVGGLFWMFRIRIILCLMGAFFYLISPLDFVPEALFGILGFLDDFFVIFLLLIYISIMYREVITQRLNR
SIO_010081: RNF170
subclass of: SO_0000673
so part of: RNF170
location: complement(join(438800..439069,441316..441426,443632..443705,448081..448150))
location: region:438800-448150:-1
so has part: feature:448081-448150:-1:exon
so has part: feature:443632-443705:-1:exon
so has part: feature:441316-441426:-1:exon
so has part: feature:438800-439069:-1:exon

XP_014417839.1
type: Protein
SIO_000068: ncbiprotein

position:448150:-1
position: 448150
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:448081-448150:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:443632-443705:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:441316-441426:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:438800-439069:-1:exon

TRNAG-ACC
type: Gene
subclass of: SO_0000704
RO_0002162: 419612
gene: TRNAG-ACC
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
so part of: sequence
location: complement(457819..457891)
location: region:457819-457891:-1
so has part: feature:457819-457891:-1:exon
subclass of: SO_0000663

116660129
type: Gene
SIO_000068: ncbigene

position:457819:-1
position: 457819
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:457891:-1
position: 457891
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:457819-457891:-1:exon

TRNAG-ACC
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 419612
gene: TRNAG-ACC
product: tRNA-Gly
inference: COORDINATES: profile:tRNAscan-SE:1.23
note: transfer RNA glycine (anticodon ACC); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:complement(457856..457858),aa:Gly,seq:acc)
SIO_010081: TRNAG-ACC
subclass of: SO_0000673
so part of: TRNAG-ACC
location: complement(457819..457891)
location: region:457819-457891:-1
so has part: feature:457819-457891:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:457819-457891:-1:exon

HOOK3
type: Gene
subclass of: SO_0000704
RO_0002162: 419612
gene: HOOK3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 466252..559890
location: region:466252-559890:1
so has part: feature:466252-559890:1:exon
subclass of: SO_0000010

102511237
type: Gene
SIO_000068: ncbigene

position:466252:1
position: 466252
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:559890:1
position: 559890
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:466252-559890:1:exon

HOOK3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 419612
gene: HOOK3
product: hook microtubule tethering protein 3, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 27 samples with support for all annotated introns
transcript id: XM_032468490.1
SIO_010081: HOOK3
subclass of: SO_0000673
so part of: HOOK3
location: join(466252..466476,473266..473351,489317..489389,492594..492644,494222..494354,498306..498373,505642..505704,507134..507217,512528..512691,516560..516700,518859..519060,523179..523289,524129..524216,528367..528436,531247..531387,535910..535997,538958..538963,540470..540504,544074..544156,545174..545274,546834..546938,547377..547448,550223..550359,552013..559890)
location: region:466252-559890:1
so has part: feature:466252-466476:1:exon
so has part: feature:473266-473351:1:exon
so has part: feature:489317-489389:1:exon
so has part: feature:492594-492644:1:exon
so has part: feature:494222-494354:1:exon
so has part: feature:498306-498373:1:exon
so has part: feature:505642-505704:1:exon
so has part: feature:507134-507217:1:exon
so has part: feature:512528-512691:1:exon
so has part: feature:516560-516700:1:exon
so has part: feature:518859-519060:1:exon
so has part: feature:523179-523289:1:exon
so has part: feature:524129-524216:1:exon
so has part: feature:528367-528436:1:exon
so has part: feature:531247-531387:1:exon
so has part: feature:535910-535997:1:exon
so has part: feature:538958-538963:1:exon
so has part: feature:540470-540504:1:exon
so has part: feature:544074-544156:1:exon
so has part: feature:545174-545274:1:exon
so has part: feature:546834-546938:1:exon
so has part: feature:547377-547448:1:exon
so has part: feature:550223-550359:1:exon
so has part: feature:552013-559890:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:466252-466476:1:exon

position:466476:1
position: 466476
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:473266-473351:1:exon

position:473266:1
position: 473266
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:473351:1
position: 473351
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:489317-489389:1:exon

position:489317:1
position: 489317
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:489389:1
position: 489389
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:492594-492644:1:exon

position:492594:1
position: 492594
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:492644:1
position: 492644
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:494222-494354:1:exon

position:494222:1
position: 494222
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:494354:1
position: 494354
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:498306-498373:1:exon

position:498306:1
position: 498306
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:498373:1
position: 498373
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:505642-505704:1:exon

position:505642:1
position: 505642
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:505704:1
position: 505704
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:507134-507217:1:exon

position:507134:1
position: 507134
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:507217:1
position: 507217
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:512528-512691:1:exon

position:512528:1
position: 512528
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:512691:1
position: 512691
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:516560-516700:1:exon

position:516560:1
position: 516560
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:516700:1
position: 516700
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:518859-519060:1:exon

position:518859:1
position: 518859
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:519060:1
position: 519060
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:523179-523289:1:exon

position:523179:1
position: 523179
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:523289:1
position: 523289
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:524129-524216:1:exon

position:524129:1
position: 524129
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:524216:1
position: 524216
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:528367-528436:1:exon

position:528367:1
position: 528367
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:528436:1
position: 528436
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:531247-531387:1:exon

position:531247:1
position: 531247
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:531387:1
position: 531387
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:535910-535997:1:exon

position:535910:1
position: 535910
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:535997:1
position: 535997
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:538958-538963:1:exon

position:538958:1
position: 538958
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:538963:1
position: 538963
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:540470-540504:1:exon

position:540470:1
position: 540470
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:540504:1
position: 540504
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:544074-544156:1:exon

position:544074:1
position: 544074
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:544156:1
position: 544156
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:545174-545274:1:exon

position:545174:1
position: 545174
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:545274:1
position: 545274
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:546834-546938:1:exon

position:546834:1
position: 546834
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:546938:1
position: 546938
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:547377-547448:1:exon

position:547377:1
position: 547377
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:547448:1
position: 547448
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:550223-550359:1:exon

position:550223:1
position: 550223
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:550359:1
position: 550359
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:552013-559890:1:exon

position:552013:1
position: 552013
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

HOOK3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 419612
gene: HOOK3
product: hook microtubule tethering protein 3, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 21 samples with support for all annotated introns
transcript id: XM_032468489.1
SIO_010081: HOOK3
subclass of: SO_0000673
so part of: HOOK3
location: join(466252..466476,473266..473351,489317..489389,492594..492644,494222..494354,498306..498373,505642..505704,507134..507217,512528..512691,516560..516700,518859..519060,523179..523289,524129..524216,528367..528436,531247..531387,535910..535997,538958..538963,540470..540504,544074..544156,545174..545274,546834..546938,547377..547448,550223..550359,554299..559890)
location: region:466252-559890:1
so has part: feature:466252-466476:1:exon
so has part: feature:473266-473351:1:exon
so has part: feature:489317-489389:1:exon
so has part: feature:492594-492644:1:exon
so has part: feature:494222-494354:1:exon
so has part: feature:498306-498373:1:exon
so has part: feature:505642-505704:1:exon
so has part: feature:507134-507217:1:exon
so has part: feature:512528-512691:1:exon
so has part: feature:516560-516700:1:exon
so has part: feature:518859-519060:1:exon
so has part: feature:523179-523289:1:exon
so has part: feature:524129-524216:1:exon
so has part: feature:528367-528436:1:exon
so has part: feature:531247-531387:1:exon
so has part: feature:535910-535997:1:exon
so has part: feature:538958-538963:1:exon
so has part: feature:540470-540504:1:exon
so has part: feature:544074-544156:1:exon
so has part: feature:545174-545274:1:exon
so has part: feature:546834-546938:1:exon
so has part: feature:547377-547448:1:exon
so has part: feature:550223-550359:1:exon
so has part: feature:554299-559890:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:466252-466476:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:473266-473351:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:489317-489389:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:492594-492644:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:494222-494354:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:498306-498373:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:505642-505704:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:507134-507217:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:512528-512691:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:516560-516700:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:518859-519060:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:523179-523289:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:524129-524216:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:528367-528436:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:531247-531387:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:535910-535997:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:538958-538963:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:540470-540504:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:544074-544156:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:545174-545274:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:546834-546938:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:547377-547448:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:550223-550359:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:554299-559890:1:exon

position:554299:1
position: 554299
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

HOOK3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 419612
gene: HOOK3
product: hook microtubule tethering protein 3, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 22 samples with support for all annotated introns
transcript id: XM_032468491.1
SIO_010081: HOOK3
subclass of: SO_0000673
so part of: HOOK3
location: join(466252..466476,473266..473351,489317..489389,492594..492644,494222..494354,498306..498373,505642..505704,507134..507217,512528..512691,516560..516700,518859..519060,523179..523289,524129..524216,528367..528436,531247..531387,535910..535997,540470..540504,544074..544156,545174..545274,546834..546938,547377..547448,550223..550359,554299..559890)
location: region:466252-559890:1
so has part: feature:466252-466476:1:exon
so has part: feature:473266-473351:1:exon
so has part: feature:489317-489389:1:exon
so has part: feature:492594-492644:1:exon
so has part: feature:494222-494354:1:exon
so has part: feature:498306-498373:1:exon
so has part: feature:505642-505704:1:exon
so has part: feature:507134-507217:1:exon
so has part: feature:512528-512691:1:exon
so has part: feature:516560-516700:1:exon
so has part: feature:518859-519060:1:exon
so has part: feature:523179-523289:1:exon
so has part: feature:524129-524216:1:exon
so has part: feature:528367-528436:1:exon
so has part: feature:531247-531387:1:exon
so has part: feature:535910-535997:1:exon
so has part: feature:540470-540504:1:exon
so has part: feature:544074-544156:1:exon
so has part: feature:545174-545274:1:exon
so has part: feature:546834-546938:1:exon
so has part: feature:547377-547448:1:exon
so has part: feature:550223-550359:1:exon
so has part: feature:554299-559890:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:466252-466476:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:473266-473351:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:489317-489389:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:492594-492644:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:494222-494354:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:498306-498373:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:505642-505704:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:507134-507217:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:512528-512691:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:516560-516700:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:518859-519060:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:523179-523289:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:524129-524216:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:528367-528436:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:531247-531387:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:535910-535997:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:540470-540504:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:544074-544156:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:545174-545274:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:546834-546938:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:547377-547448:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:550223-550359:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:554299-559890:1:exon

HOOK3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 419612
gene: HOOK3
product: hook microtubule tethering protein 3, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 43 samples with support for all annotated introns
transcript id: XM_032468492.1
SIO_010081: HOOK3
subclass of: SO_0000673
so part of: HOOK3
location: join(466420..466476,473266..473351,489317..489389,492594..492644,494222..494354,498306..498373,505642..505704,507134..507217,512528..512691,516560..516700,518859..519060,523179..523289,524129..524216,528367..528436,531247..531387,535910..535997,540470..540504,544074..544156,545174..545274,546834..546938,547377..547448,550223..559890)
location: region:466420-559890:1
so has part: feature:466420-466476:1:exon
so has part: feature:473266-473351:1:exon
so has part: feature:489317-489389:1:exon
so has part: feature:492594-492644:1:exon
so has part: feature:494222-494354:1:exon
so has part: feature:498306-498373:1:exon
so has part: feature:505642-505704:1:exon
so has part: feature:507134-507217:1:exon
so has part: feature:512528-512691:1:exon
so has part: feature:516560-516700:1:exon
so has part: feature:518859-519060:1:exon
so has part: feature:523179-523289:1:exon
so has part: feature:524129-524216:1:exon
so has part: feature:528367-528436:1:exon
so has part: feature:531247-531387:1:exon
so has part: feature:535910-535997:1:exon
so has part: feature:540470-540504:1:exon
so has part: feature:544074-544156:1:exon
so has part: feature:545174-545274:1:exon
so has part: feature:546834-546938:1:exon
so has part: feature:547377-547448:1:exon
so has part: feature:550223-559890:1:exon

position:466420:1
position: 466420
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:466420-466476:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:473266-473351:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:489317-489389:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:492594-492644:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:494222-494354:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:498306-498373:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:505642-505704:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:507134-507217:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:512528-512691:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:516560-516700:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:518859-519060:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:523179-523289:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:524129-524216:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:528367-528436:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:531247-531387:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:535910-535997:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:540470-540504:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:544074-544156:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:545174-545274:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:546834-546938:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:547377-547448:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:550223-559890:1:exon

HOOK3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 419612
gene: HOOK3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein Hook homolog 3 isoform X1
translation: MFNVESLERVELCESLLTWIQTFNVDAPCQTVEDLTNGVVMAQVLQKIDPAYFDENWLNRIKTEVGDNWRLKISNLKKILKGILDYNHEILGQQINDFTLPDVNLLGEHADAAELGRMLQLILGCAVNCEQKQEYIQAIMMMEESVQHVVMTAIQELMSKESPVSAGNDAYVDLDRQLKKTSEELNEALSAKEEIAQRCHELDLQVAALQEEKSSLLAENQVLMERLNQSDSIEDPNSPAGRRHLQLQTQLEQLQEETFRLEAAKDDYRIRCEELEKEISELRQQNDELTTLADDAQSLKDEIDVLRHSSDKVSKLEGQVESYKKKLEDLGDLRRQVKLLEEKNTMYMQNTVSLEEELRKANAARSQLETYKRQVVELQNRLSEESKKADKLDFEYKRLKEKVDSLQKEKDRLRTERDSLKETIEELRCVQAQEGQLTTQGLMPLGSQESSDSLAAEIVTPEIREKLIRLQHENKMLKINQEGSDNEKIALLQSLLDDANLRKNELETENRLVNQRLLEVQSQVEELQKSLQDQGSKAEDAISVLLKKKLEEHLEKLHEANNELQKKRAIIEDLEPRFNNSSLKIEELQEALRKKEEEMKQMEERYKKYLEKAKSVIRTLDPKQNQGAAPEIQALKNQLQERDRLFHSLEKEYEKTKSQREMEEKYIVSAWYNMGMTLHKKAAEDRLASTGSGQSFLARQRQATSTRRSYPGHVQPATARVSTQ
SIO_010081: HOOK3
subclass of: SO_0000673
so part of: HOOK3
location: join(466420..466476,473266..473351,489317..489389,492594..492644,494222..494354,498306..498373,505642..505704,507134..507217,512528..512691,516560..516700,518859..519060,523179..523289,524129..524216,528367..528436,531247..531387,535910..535997,538958..538963,540470..540504,544074..544156,545174..545274,546834..546938,547377..547448,550223..550359,554299..554314)
location: region:466420-554314:1
so has part: feature:466420-466476:1:exon
so has part: feature:473266-473351:1:exon
so has part: feature:489317-489389:1:exon
so has part: feature:492594-492644:1:exon
so has part: feature:494222-494354:1:exon
so has part: feature:498306-498373:1:exon
so has part: feature:505642-505704:1:exon
so has part: feature:507134-507217:1:exon
so has part: feature:512528-512691:1:exon
so has part: feature:516560-516700:1:exon
so has part: feature:518859-519060:1:exon
so has part: feature:523179-523289:1:exon
so has part: feature:524129-524216:1:exon
so has part: feature:528367-528436:1:exon
so has part: feature:531247-531387:1:exon
so has part: feature:535910-535997:1:exon
so has part: feature:538958-538963:1:exon
so has part: feature:540470-540504:1:exon
so has part: feature:544074-544156:1:exon
so has part: feature:545174-545274:1:exon
so has part: feature:546834-546938:1:exon
so has part: feature:547377-547448:1:exon
so has part: feature:550223-550359:1:exon
so has part: feature:554299-554314:1:exon

XP_032324380.1
type: Protein
SIO_000068: ncbiprotein

position:554314:1
position: 554314
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:466420-466476:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:473266-473351:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:489317-489389:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:492594-492644:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:494222-494354:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:498306-498373:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:505642-505704:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:507134-507217:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:512528-512691:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:516560-516700:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:518859-519060:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:523179-523289:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:524129-524216:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:528367-528436:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:531247-531387:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:535910-535997:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:538958-538963:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:540470-540504:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:544074-544156:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:545174-545274:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:546834-546938:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:547377-547448:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:550223-550359:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:554299-554314:1:exon

HOOK3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 419612
gene: HOOK3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein Hook homolog 3 isoform X3
translation: MFNVESLERVELCESLLTWIQTFNVDAPCQTVEDLTNGVVMAQVLQKIDPAYFDENWLNRIKTEVGDNWRLKISNLKKILKGILDYNHEILGQQINDFTLPDVNLLGEHADAAELGRMLQLILGCAVNCEQKQEYIQAIMMMEESVQHVVMTAIQELMSKESPVSAGNDAYVDLDRQLKKTSEELNEALSAKEEIAQRCHELDLQVAALQEEKSSLLAENQVLMERLNQSDSIEDPNSPAGRRHLQLQTQLEQLQEETFRLEAAKDDYRIRCEELEKEISELRQQNDELTTLADDAQSLKDEIDVLRHSSDKVSKLEGQVESYKKKLEDLGDLRRQVKLLEEKNTMYMQNTVSLEEELRKANAARSQLETYKRQVVELQNRLSEESKKADKLDFEYKRLKEKVDSLQKEKDRLRTERDSLKETIEELRCVQAQEGQLTTQGLMPLGSQESSDSLAAEIVTPEIREKLIRLQHENKMLKINQEGSDNEKIALLQSLLDDANLRKNELETENRLVNQRLLEVQSQVEELQKSLQDQGSKAEDSVLLKKKLEEHLEKLHEANNELQKKRAIIEDLEPRFNNSSLKIEELQEALRKKEEEMKQMEERYKKYLEKAKSVIRTLDPKQNQGAAPEIQALKNQLQERDRLFHSLEKEYEKTKSQREMEEKYIVSAWYNMGMTLHKKAAEDRLASTGSGQSFLARQRQATSTRRSYPGHVQPATARVSTQ
SIO_010081: HOOK3
subclass of: SO_0000673
so part of: HOOK3
location: join(466420..466476,473266..473351,489317..489389,492594..492644,494222..494354,498306..498373,505642..505704,507134..507217,512528..512691,516560..516700,518859..519060,523179..523289,524129..524216,528367..528436,531247..531387,535910..535997,540470..540504,544074..544156,545174..545274,546834..546938,547377..547448,550223..550359,554299..554314)
location: region:466420-554314:1
so has part: feature:466420-466476:1:exon
so has part: feature:473266-473351:1:exon
so has part: feature:489317-489389:1:exon
so has part: feature:492594-492644:1:exon
so has part: feature:494222-494354:1:exon
so has part: feature:498306-498373:1:exon
so has part: feature:505642-505704:1:exon
so has part: feature:507134-507217:1:exon
so has part: feature:512528-512691:1:exon
so has part: feature:516560-516700:1:exon
so has part: feature:518859-519060:1:exon
so has part: feature:523179-523289:1:exon
so has part: feature:524129-524216:1:exon
so has part: feature:528367-528436:1:exon
so has part: feature:531247-531387:1:exon
so has part: feature:535910-535997:1:exon
so has part: feature:540470-540504:1:exon
so has part: feature:544074-544156:1:exon
so has part: feature:545174-545274:1:exon
so has part: feature:546834-546938:1:exon
so has part: feature:547377-547448:1:exon
so has part: feature:550223-550359:1:exon
so has part: feature:554299-554314:1:exon

XP_032324382.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:466420-466476:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:473266-473351:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:489317-489389:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:492594-492644:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:494222-494354:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:498306-498373:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:505642-505704:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:507134-507217:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:512528-512691:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:516560-516700:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:518859-519060:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:523179-523289:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:524129-524216:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:528367-528436:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:531247-531387:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:535910-535997:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:540470-540504:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:544074-544156:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:545174-545274:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:546834-546938:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:547377-547448:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:550223-550359:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:554299-554314:1:exon

HOOK3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 419612
gene: HOOK3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein Hook homolog 3 isoform X2
translation: MFNVESLERVELCESLLTWIQTFNVDAPCQTVEDLTNGVVMAQVLQKIDPAYFDENWLNRIKTEVGDNWRLKISNLKKILKGILDYNHEILGQQINDFTLPDVNLLGEHADAAELGRMLQLILGCAVNCEQKQEYIQAIMMMEESVQHVVMTAIQELMSKESPVSAGNDAYVDLDRQLKKTSEELNEALSAKEEIAQRCHELDLQVAALQEEKSSLLAENQVLMERLNQSDSIEDPNSPAGRRHLQLQTQLEQLQEETFRLEAAKDDYRIRCEELEKEISELRQQNDELTTLADDAQSLKDEIDVLRHSSDKVSKLEGQVESYKKKLEDLGDLRRQVKLLEEKNTMYMQNTVSLEEELRKANAARSQLETYKRQVVELQNRLSEESKKADKLDFEYKRLKEKVDSLQKEKDRLRTERDSLKETIEELRCVQAQEGQLTTQGLMPLGSQESSDSLAAEIVTPEIREKLIRLQHENKMLKINQEGSDNEKIALLQSLLDDANLRKNELETENRLVNQRLLEVQSQVEELQKSLQDQGSKAEDAISVLLKKKLEEHLEKLHEANNELQKKRAIIEDLEPRFNNSSLKIEELQEALRKKEEEMKQMEERYKKYLEKAKSVIRTLDPKQNQGAAPEIQALKNQLQERDRLFHSLEKEYEKTKSQREMEEKYIVSAWYNMGMTLHKKAAEDRLASTGSGQSFLARQRQATSTRRSYPGHVQPATARNHT
SIO_010081: HOOK3
subclass of: SO_0000673
so part of: HOOK3
location: join(466420..466476,473266..473351,489317..489389,492594..492644,494222..494354,498306..498373,505642..505704,507134..507217,512528..512691,516560..516700,518859..519060,523179..523289,524129..524216,528367..528436,531247..531387,535910..535997,538958..538963,540470..540504,544074..544156,545174..545274,546834..546938,547377..547448,550223..550359,552013..552025)
location: region:466420-552025:1
so has part: feature:466420-466476:1:exon
so has part: feature:473266-473351:1:exon
so has part: feature:489317-489389:1:exon
so has part: feature:492594-492644:1:exon
so has part: feature:494222-494354:1:exon
so has part: feature:498306-498373:1:exon
so has part: feature:505642-505704:1:exon
so has part: feature:507134-507217:1:exon
so has part: feature:512528-512691:1:exon
so has part: feature:516560-516700:1:exon
so has part: feature:518859-519060:1:exon
so has part: feature:523179-523289:1:exon
so has part: feature:524129-524216:1:exon
so has part: feature:528367-528436:1:exon
so has part: feature:531247-531387:1:exon
so has part: feature:535910-535997:1:exon
so has part: feature:538958-538963:1:exon
so has part: feature:540470-540504:1:exon
so has part: feature:544074-544156:1:exon
so has part: feature:545174-545274:1:exon
so has part: feature:546834-546938:1:exon
so has part: feature:547377-547448:1:exon
so has part: feature:550223-550359:1:exon
so has part: feature:552013-552025:1:exon

XP_032324381.1
type: Protein
SIO_000068: ncbiprotein

position:552025:1
position: 552025
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:466420-466476:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:473266-473351:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:489317-489389:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:492594-492644:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:494222-494354:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:498306-498373:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:505642-505704:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:507134-507217:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:512528-512691:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:516560-516700:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:518859-519060:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:523179-523289:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:524129-524216:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:528367-528436:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:531247-531387:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:535910-535997:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:538958-538963:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:540470-540504:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:544074-544156:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:545174-545274:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:546834-546938:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:547377-547448:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:550223-550359:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:552013-552025:1:exon

HOOK3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 419612
gene: HOOK3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein Hook homolog 3 isoform X4
translation: MFNVESLERVELCESLLTWIQTFNVDAPCQTVEDLTNGVVMAQVLQKIDPAYFDENWLNRIKTEVGDNWRLKISNLKKILKGILDYNHEILGQQINDFTLPDVNLLGEHADAAELGRMLQLILGCAVNCEQKQEYIQAIMMMEESVQHVVMTAIQELMSKESPVSAGNDAYVDLDRQLKKTSEELNEALSAKEEIAQRCHELDLQVAALQEEKSSLLAENQVLMERLNQSDSIEDPNSPAGRRHLQLQTQLEQLQEETFRLEAAKDDYRIRCEELEKEISELRQQNDELTTLADDAQSLKDEIDVLRHSSDKVSKLEGQVESYKKKLEDLGDLRRQVKLLEEKNTMYMQNTVSLEEELRKANAARSQLETYKRQVVELQNRLSEESKKADKLDFEYKRLKEKVDSLQKEKDRLRTERDSLKETIEELRCVQAQEGQLTTQGLMPLGSQESSDSLAAEIVTPEIREKLIRLQHENKMLKINQEGSDNEKIALLQSLLDDANLRKNELETENRLVNQRLLEVQSQVEELQKSLQDQGSKAEDSVLLKKKLEEHLEKLHEANNELQKKRAIIEDLEPRFNNSSLKIEELQEALRKKEEEMKQMEERYKKYLEKAKSVIRTLDPKQNQGAAPEIQALKNQLQERDRLFHSLEKEYEKTKSQREMEEKYIVSAWYNMGMTLHKKAAEDRLASTGSGQSFLARQRQATSTRRSYPGHVQPATAR
SIO_010081: HOOK3
subclass of: SO_0000673
so part of: HOOK3
location: join(466420..466476,473266..473351,489317..489389,492594..492644,494222..494354,498306..498373,505642..505704,507134..507217,512528..512691,516560..516700,518859..519060,523179..523289,524129..524216,528367..528436,531247..531387,535910..535997,540470..540504,544074..544156,545174..545274,546834..546938,547377..547448,550223..550363)
location: region:466420-550363:1
so has part: feature:466420-466476:1:exon
so has part: feature:473266-473351:1:exon
so has part: feature:489317-489389:1:exon
so has part: feature:492594-492644:1:exon
so has part: feature:494222-494354:1:exon
so has part: feature:498306-498373:1:exon
so has part: feature:505642-505704:1:exon
so has part: feature:507134-507217:1:exon
so has part: feature:512528-512691:1:exon
so has part: feature:516560-516700:1:exon
so has part: feature:518859-519060:1:exon
so has part: feature:523179-523289:1:exon
so has part: feature:524129-524216:1:exon
so has part: feature:528367-528436:1:exon
so has part: feature:531247-531387:1:exon
so has part: feature:535910-535997:1:exon
so has part: feature:540470-540504:1:exon
so has part: feature:544074-544156:1:exon
so has part: feature:545174-545274:1:exon
so has part: feature:546834-546938:1:exon
so has part: feature:547377-547448:1:exon
so has part: feature:550223-550363:1:exon

XP_032324383.1
type: Protein
SIO_000068: ncbiprotein

position:550363:1
position: 550363
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:466420-466476:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:473266-473351:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:489317-489389:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:492594-492644:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:494222-494354:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:498306-498373:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:505642-505704:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:507134-507217:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:512528-512691:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:516560-516700:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:518859-519060:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:523179-523289:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:524129-524216:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:528367-528436:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:531247-531387:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:535910-535997:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:540470-540504:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:544074-544156:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:545174-545274:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:546834-546938:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:547377-547448:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:550223-550363:1:exon

FNTA
type: Gene
subclass of: SO_0000704
RO_0002162: 419612
gene: FNTA
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 569230..589842
location: region:569230-589842:1
so has part: feature:569230-589842:1:exon
subclass of: SO_0000010

102511020
type: Gene
SIO_000068: ncbigene

position:569230:1
position: 569230
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:589842:1
position: 589842
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:569230-589842:1:exon

FNTA
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 419612
gene: FNTA
product: farnesyltransferase, CAAX box, alpha
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 11 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 48 samples with support for all annotated introns
transcript id: XM_032468385.1
SIO_010081: FNTA
subclass of: SO_0000673
so part of: FNTA
location: join(569230..569442,571481..571566,577393..577507,581319..581423,584235..584361,585776..585924,587792..587854,588748..588919,589201..589842)
location: region:569230-589842:1
so has part: feature:569230-569442:1:exon
so has part: feature:571481-571566:1:exon
so has part: feature:577393-577507:1:exon
so has part: feature:581319-581423:1:exon
so has part: feature:584235-584361:1:exon
so has part: feature:585776-585924:1:exon
so has part: feature:587792-587854:1:exon
so has part: feature:588748-588919:1:exon
so has part: feature:589201-589842:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:569230-569442:1:exon

position:569442:1
position: 569442
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:571481-571566:1:exon

position:571481:1
position: 571481
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:571566:1
position: 571566
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:577393-577507:1:exon

position:577393:1
position: 577393
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:577507:1
position: 577507
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:581319-581423:1:exon

position:581319:1
position: 581319
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:581423:1
position: 581423
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:584235-584361:1:exon

position:584235:1
position: 584235
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:584361:1
position: 584361
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:585776-585924:1:exon

position:585776:1
position: 585776
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:585924:1
position: 585924
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:587792-587854:1:exon

position:587792:1
position: 587792
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:587854:1
position: 587854
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:588748-588919:1:exon

position:588748:1
position: 588748
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:588919:1
position: 588919
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:589201-589842:1:exon

position:589201:1
position: 589201
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

FNTA
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 419612
gene: FNTA
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein farnesyltransferase/geranylgeranyltransferase type-1 subunit alpha
translation: MAAADGVGEAAQDGEAGQPEPGPPEPPPPQPPQEEAAASPMDDGFLSLDSPTYVLYRDRAEWADIDPVPQNDGPNPVVQIIYSEKFRDVYDYFRAVLQRDERSERAFKLTRDAIELNAANYTVWHFRRVLLKSLQKDLHEEMNYITAIIEEQPKNYQVWHHRRVLVEWLRDPSQELEFIADVLNQDAKNYHAWQHRQWVIQEFKLWDNELQYVDQLLKEDVRNNSVWNQRYFVISNTTGYNDPAVLEREVQYTLEMIKLVPHNESAWNYLKGILQDRGLSKYPNLLSQLLDLQPSHSSPYLIAFLVDIYEDMLENQCDNKEDILSKALELCEILAKEKDTIRKEYWRYIGRSLQSKHSTERDPPPNAQQ
SIO_010081: FNTA
subclass of: SO_0000673
so part of: FNTA
location: join(569273..569442,571481..571566,577393..577507,581319..581423,584235..584361,585776..585924,587792..587854,588748..588919,589201..589323)
location: region:569273-589323:1
so has part: feature:569273-569442:1:exon
so has part: feature:571481-571566:1:exon
so has part: feature:577393-577507:1:exon
so has part: feature:581319-581423:1:exon
so has part: feature:584235-584361:1:exon
so has part: feature:585776-585924:1:exon
so has part: feature:587792-587854:1:exon
so has part: feature:588748-588919:1:exon
so has part: feature:589201-589323:1:exon

XP_032324276.1
type: Protein
SIO_000068: ncbiprotein

position:569273:1
position: 569273
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:589323:1
position: 589323
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:569273-569442:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:571481-571566:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:577393-577507:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:581319-581423:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:584235-584361:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:585776-585924:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:587792-587854:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:588748-588919:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:589201-589323:1:exon

LOC116659977
type: Gene
subclass of: SO_0000704
RO_0002162: 419612
gene: LOC116659977
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: 595249..597254
location: region:595249-597254:1
so has part: feature:595249-597254:1:exon

116659977
type: Gene
SIO_000068: ncbigene

position:595249:1
position: 595249
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:597254:1
position: 597254
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:595249-597254:1:exon

LOC116659977
type: Exon
subclass of: SO_0000147
RO_0002162: 419612
gene: LOC116659977
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins, and 73% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC116659977
subclass of: SO_0000673
so part of: LOC116659977
location: 595249..595254
location: region:595249-595254:1
so has part: feature:595249-595254:1:exon

position:595254:1
position: 595254
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:595249-595254:1:exon

LOC116659977
type: Exon
subclass of: SO_0000147
RO_0002162: 419612
gene: LOC116659977
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins, and 73% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC116659977
subclass of: SO_0000673
so part of: LOC116659977
location: 595578..595880
location: region:595578-595880:1
so has part: feature:595578-595880:1:exon

position:595578:1
position: 595578
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:595880:1
position: 595880
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:595578-595880:1:exon

LOC116659977
type: Exon
subclass of: SO_0000147
RO_0002162: 419612
gene: LOC116659977
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins, and 73% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC116659977
subclass of: SO_0000673
so part of: LOC116659977
location: 596396..597254
location: region:596396-597254:1
so has part: feature:596396-597254:1:exon

position:596396:1
position: 596396
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:596396-597254:1:exon

POMK
type: Gene
subclass of: SO_0000704
RO_0002162: 419612
gene: POMK
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 597490..612108
location: region:597490-612108:1
so has part: feature:597490-612108:1:exon
subclass of: SO_0000010

116660062
type: Gene
SIO_000068: ncbigene

position:597490:1
position: 597490
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:612108:1
position: 612108
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:597490-612108:1:exon

POMK
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 419612
gene: POMK
product: protein O-mannose kinase, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 28 samples with support for all annotated introns
transcript id: XM_032468669.1
SIO_010081: POMK
subclass of: SO_0000673
so part of: POMK
location: join(597490..597527,600385..600474,603803..603902,604790..605088,609492..612108)
location: region:597490-612108:1
so has part: feature:597490-597527:1:exon
so has part: feature:600385-600474:1:exon
so has part: feature:603803-603902:1:exon
so has part: feature:604790-605088:1:exon
so has part: feature:609492-612108:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:597490-597527:1:exon

position:597527:1
position: 597527
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:600385-600474:1:exon

position:600385:1
position: 600385
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:600474:1
position: 600474
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:603803-603902:1:exon

position:603803:1
position: 603803
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:603902:1
position: 603902
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:604790-605088:1:exon

position:604790:1
position: 604790
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:605088:1
position: 605088
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:609492-612108:1:exon

position:609492:1
position: 609492
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

POMK
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 419612
gene: POMK
product: protein O-mannose kinase, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 32 samples with support for all annotated introns
transcript id: XM_032468668.1
SIO_010081: POMK
subclass of: SO_0000673
so part of: POMK
location: join(597491..597527,600385..600474,603807..603902,604790..605088,609492..612108)
location: region:597491-612108:1
so has part: feature:597491-597527:1:exon
so has part: feature:600385-600474:1:exon
so has part: feature:603807-603902:1:exon
so has part: feature:604790-605088:1:exon
so has part: feature:609492-612108:1:exon

position:597491:1
position: 597491
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:597491-597527:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:600385-600474:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:603807-603902:1:exon

position:603807:1
position: 603807
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:604790-605088:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:609492-612108:1:exon

POMK
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 419612
gene: POMK
product: protein O-mannose kinase, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 12 samples with support for all annotated introns
transcript id: XM_032468670.1
SIO_010081: POMK
subclass of: SO_0000673
so part of: POMK
location: join(597508..597527,600385..600474,601482..601635,603807..603902,604790..605088,609492..612108)
location: region:597508-612108:1
so has part: feature:597508-597527:1:exon
so has part: feature:600385-600474:1:exon
so has part: feature:601482-601635:1:exon
so has part: feature:603807-603902:1:exon
so has part: feature:604790-605088:1:exon
so has part: feature:609492-612108:1:exon

position:597508:1
position: 597508
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:597508-597527:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:600385-600474:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:601482-601635:1:exon

position:601482:1
position: 601482
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:601635:1
position: 601635
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:603807-603902:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:604790-605088:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:609492-612108:1:exon

HGSNAT
type: Gene
subclass of: SO_0000704
RO_0002162: 419612
gene: HGSNAT
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 599079..650556
location: region:599079-650556:1
so has part: feature:599079-650556:1:exon
subclass of: SO_0000010

102515446
type: Gene
SIO_000068: ncbigene

position:599079:1
position: 599079
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:650556:1
position: 650556
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:599079-650556:1:exon

HGSNAT
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 419612
gene: HGSNAT
product: heparan-alpha-glucosaminide N-acetyltransferase, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 12 samples with support for all annotated introns
transcript id: XM_014562343.2
SIO_010081: HGSNAT
subclass of: SO_0000673
so part of: HGSNAT
location: join(599079..599282,600385..600474,626442..626557,630737..630873,631105..631226,632119..632188,635714..635783,636557..636654,638086..638162,638755..638785,640392..640552,641306..641421,643615..643736,644106..644232,645245..645331,647350..647427,647894..647964,648053..648165,648348..650556)
location: region:599079-650556:1
so has part: feature:599079-599282:1:exon
so has part: feature:600385-600474:1:exon
so has part: feature:626442-626557:1:exon
so has part: feature:630737-630873:1:exon
so has part: feature:631105-631226:1:exon
so has part: feature:632119-632188:1:exon
so has part: feature:635714-635783:1:exon
so has part: feature:636557-636654:1:exon
so has part: feature:638086-638162:1:exon
so has part: feature:638755-638785:1:exon
so has part: feature:640392-640552:1:exon
so has part: feature:641306-641421:1:exon
so has part: feature:643615-643736:1:exon
so has part: feature:644106-644232:1:exon
so has part: feature:645245-645331:1:exon
so has part: feature:647350-647427:1:exon
so has part: feature:647894-647964:1:exon
so has part: feature:648053-648165:1:exon
so has part: feature:648348-650556:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:599079-599282:1:exon

position:599282:1
position: 599282
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:600385-600474:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:626442-626557:1:exon

position:626442:1
position: 626442
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:626557:1
position: 626557
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:630737-630873:1:exon

position:630737:1
position: 630737
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:630873:1
position: 630873
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:631105-631226:1:exon

position:631105:1
position: 631105
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:631226:1
position: 631226
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:632119-632188:1:exon

position:632119:1
position: 632119
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:632188:1
position: 632188
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:635714-635783:1:exon

position:635714:1
position: 635714
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:635783:1
position: 635783
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:636557-636654:1:exon

position:636557:1
position: 636557
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:636654:1
position: 636654
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:638086-638162:1:exon

position:638086:1
position: 638086
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:638162:1
position: 638162
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:638755-638785:1:exon

position:638755:1
position: 638755
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:638785:1
position: 638785
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:640392-640552:1:exon

position:640392:1
position: 640392
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:640552:1
position: 640552
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:641306-641421:1:exon

position:641306:1
position: 641306
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:641421:1
position: 641421
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:643615-643736:1:exon

position:643615:1
position: 643615
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:643736:1
position: 643736
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:644106-644232:1:exon

position:644106:1
position: 644106
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:644232:1
position: 644232
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:645245-645331:1:exon

position:645245:1
position: 645245
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:645331:1
position: 645331
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:647350-647427:1:exon

position:647350:1
position: 647350
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:647427:1
position: 647427
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:647894-647964:1:exon

position:647894:1
position: 647894
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:647964:1
position: 647964
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:648053-648165:1:exon

position:648053:1
position: 648053
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:648165:1
position: 648165
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:648348-650556:1:exon

position:648348:1
position: 648348
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

HGSNAT
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 419612
gene: HGSNAT
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: heparan-alpha-glucosaminide N-acetyltransferase isoform X2
translation: MEDTRVPTPGKRKDPTCCGKWIGKEEELGAYVGKCCGSPDVDKKRHVELKMDQALLLIHNELPGTNLTVYWNYDCCYQCLLQVLVRASRGGKPGKPSVAAVAVGTQHVSILRLNDTVEDKELCRLEYKFGEFGNYSLLVKHTPDGASEAACDLVVNEKPVDSDLPVTVAFLVGLALVIAVSFLKFLWSLEDFNNWISKAINSRETDRLINSELGSPSRAGDPQPEAWRPSAAPLRLRCLDTFRGMALTIMVFVNYGGGRYWYFKHSSWNGLTVADLVFPWFVFIMGSSIFLSMTSTLQRGCSKFRLLGKIAWRSFLLLCIGIVVVNPNYCLGPLSWEEARIPGVLQRLGVTYFVVAVLELLFFKPVPESCASERSCFSLLDVVSSWPQWLVIMALEGIWLALTFFLPVPGCPTGYLGPGGIGDLGKYPNCTGGAAGYIDRLLLGDHHIYQHPSSAVLYHTDVAYDPEGILGTINSIVMAFLGVQAGKILLYYKDRTKDILVRFTAWCCLLGLISVALTKASENEGFIPVNKNLWSISYVTTLSAFAFFILLVLYPVVDVHGLWTGTPFFYPGMNSILVYVGHEVFENYFPFQWRLGDSQSHKEHLVQNLVATALWVLIAYILYKKKVFWKI
SIO_010081: HGSNAT
subclass of: SO_0000673
so part of: HGSNAT
location: join(599255..599282,600385..600474,626442..626557,630737..630873,631105..631226,632119..632188,635714..635783,636557..636654,638086..638162,638755..638785,640392..640552,641306..641421,643615..643736,644106..644232,645245..645331,647350..647427,647894..647964,648053..648165,648348..648529)
location: region:599255-648529:1
so has part: feature:599255-599282:1:exon
so has part: feature:600385-600474:1:exon
so has part: feature:626442-626557:1:exon
so has part: feature:630737-630873:1:exon
so has part: feature:631105-631226:1:exon
so has part: feature:632119-632188:1:exon
so has part: feature:635714-635783:1:exon
so has part: feature:636557-636654:1:exon
so has part: feature:638086-638162:1:exon
so has part: feature:638755-638785:1:exon
so has part: feature:640392-640552:1:exon
so has part: feature:641306-641421:1:exon
so has part: feature:643615-643736:1:exon
so has part: feature:644106-644232:1:exon
so has part: feature:645245-645331:1:exon
so has part: feature:647350-647427:1:exon
so has part: feature:647894-647964:1:exon
so has part: feature:648053-648165:1:exon
so has part: feature:648348-648529:1:exon

XP_014417829.1
type: Protein
SIO_000068: ncbiprotein

position:599255:1
position: 599255
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:648529:1
position: 648529
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:599255-599282:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:600385-600474:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:626442-626557:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:630737-630873:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:631105-631226:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:632119-632188:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:635714-635783:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:636557-636654:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:638086-638162:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:638755-638785:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:640392-640552:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:641306-641421:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:643615-643736:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:644106-644232:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:645245-645331:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:647350-647427:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:647894-647964:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:648053-648165:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:648348-648529:1:exon

POMK
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 419612
gene: POMK
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein O-mannose kinase
translation: MAEDSAMETRAQEGRKGLPHRDMPPGLGLLLAMALMNALLYLCLDRFFISPRRTEDPGRCPHGHFRVGQMSSCSPWLSCEQLRTEVRQLRRVGEGAVKRVFLSEWKERKVALSRLTRLDVREDFLHGLRMLKSLQGQHVVTLLGYCEDDHTILTEYHPLGSLSNLEETLNLSRYQRLNTWQHRLQLAVDYVSILSFLHRSPLGTLVMCDSSDLPKTLSQYLLTANFSVVLNDLDALPLVNRSSGALAKCGHRELRGDFVAPEQLWPYGEDVPFRDDLMPAYDEKVDIWKIPDVTSFLLGHVEGSDMVRFHLFDIHQACKSQTPAERPTAQDVLDAYQKVLGLLRDSAMSQTREML
SIO_010081: POMK
subclass of: SO_0000673
so part of: POMK
location: join(604792..605088,609492..610262)
location: region:604792-610262:1
so has part: feature:604792-605088:1:exon
so has part: feature:609492-610262:1:exon

XP_032324559.1
type: Protein
SIO_000068: ncbiprotein

position:604792:1
position: 604792
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:610262:1
position: 610262
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:604792-605088:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:609492-610262:1:exon

POMK
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 419612
gene: POMK
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein O-mannose kinase
translation: MAEDSAMETRAQEGRKGLPHRDMPPGLGLLLAMALMNALLYLCLDRFFISPRRTEDPGRCPHGHFRVGQMSSCSPWLSCEQLRTEVRQLRRVGEGAVKRVFLSEWKERKVALSRLTRLDVREDFLHGLRMLKSLQGQHVVTLLGYCEDDHTILTEYHPLGSLSNLEETLNLSRYQRLNTWQHRLQLAVDYVSILSFLHRSPLGTLVMCDSSDLPKTLSQYLLTANFSVVLNDLDALPLVNRSSGALAKCGHRELRGDFVAPEQLWPYGEDVPFRDDLMPAYDEKVDIWKIPDVTSFLLGHVEGSDMVRFHLFDIHQACKSQTPAERPTAQDVLDAYQKVLGLLRDSAMSQTREML
SIO_010081: POMK
subclass of: SO_0000673
so part of: POMK
location: join(604792..605088,609492..610262)
location: region:604792-610262:1
so has part: feature:604792-605088:1:exon
so has part: feature:609492-610262:1:exon

XP_032324560.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:604792-605088:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:609492-610262:1:exon

POMK
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 419612
gene: POMK
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein O-mannose kinase
translation: MAEDSAMETRAQEGRKGLPHRDMPPGLGLLLAMALMNALLYLCLDRFFISPRRTEDPGRCPHGHFRVGQMSSCSPWLSCEQLRTEVRQLRRVGEGAVKRVFLSEWKERKVALSRLTRLDVREDFLHGLRMLKSLQGQHVVTLLGYCEDDHTILTEYHPLGSLSNLEETLNLSRYQRLNTWQHRLQLAVDYVSILSFLHRSPLGTLVMCDSSDLPKTLSQYLLTANFSVVLNDLDALPLVNRSSGALAKCGHRELRGDFVAPEQLWPYGEDVPFRDDLMPAYDEKVDIWKIPDVTSFLLGHVEGSDMVRFHLFDIHQACKSQTPAERPTAQDVLDAYQKVLGLLRDSAMSQTREML
SIO_010081: POMK
subclass of: SO_0000673
so part of: POMK
location: join(604792..605088,609492..610262)
location: region:604792-610262:1
so has part: feature:604792-605088:1:exon
so has part: feature:609492-610262:1:exon

XP_032324561.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:604792-605088:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:609492-610262:1:exon

HGSNAT
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 419612
gene: HGSNAT
product: heparan-alpha-glucosaminide N-acetyltransferase, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 25 samples with support for all annotated introns
transcript id: XM_032468667.1
SIO_010081: HGSNAT
subclass of: SO_0000673
so part of: HGSNAT
location: join(604961..605088,626442..626557,630737..630873,631105..631226,632119..632188,635714..635783,636557..636654,638086..638162,638755..638785,640392..640552,641306..641421,643615..643736,644106..644232,645245..645331,647350..647427,647894..647964,648053..648165,648348..650556)
location: region:604961-650556:1
so has part: feature:604961-605088:1:exon
so has part: feature:626442-626557:1:exon
so has part: feature:630737-630873:1:exon
so has part: feature:631105-631226:1:exon
so has part: feature:632119-632188:1:exon
so has part: feature:635714-635783:1:exon
so has part: feature:636557-636654:1:exon
so has part: feature:638086-638162:1:exon
so has part: feature:638755-638785:1:exon
so has part: feature:640392-640552:1:exon
so has part: feature:641306-641421:1:exon
so has part: feature:643615-643736:1:exon
so has part: feature:644106-644232:1:exon
so has part: feature:645245-645331:1:exon
so has part: feature:647350-647427:1:exon
so has part: feature:647894-647964:1:exon
so has part: feature:648053-648165:1:exon
so has part: feature:648348-650556:1:exon

position:604961:1
position: 604961
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:604961-605088:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:626442-626557:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:630737-630873:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:631105-631226:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:632119-632188:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:635714-635783:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:636557-636654:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:638086-638162:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:638755-638785:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:640392-640552:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:641306-641421:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:643615-643736:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:644106-644232:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:645245-645331:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:647350-647427:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:647894-647964:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:648053-648165:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:648348-650556:1:exon

HGSNAT
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 419612
gene: HGSNAT
product: heparan-alpha-glucosaminide N-acetyltransferase, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 40 samples with support for all annotated introns
transcript id: XM_032468665.1
SIO_010081: HGSNAT
subclass of: SO_0000673
so part of: HGSNAT
location: join(621315..621547,626442..626557,630737..630873,631105..631226,632119..632188,635714..635783,636557..636654,638086..638162,638755..638785,640392..640552,641306..641421,643615..643736,644106..644232,645245..645331,647350..647427,647894..647964,648053..648165,648348..650556)
location: region:621315-650556:1
so has part: feature:621315-621547:1:exon
so has part: feature:626442-626557:1:exon
so has part: feature:630737-630873:1:exon
so has part: feature:631105-631226:1:exon
so has part: feature:632119-632188:1:exon
so has part: feature:635714-635783:1:exon
so has part: feature:636557-636654:1:exon
so has part: feature:638086-638162:1:exon
so has part: feature:638755-638785:1:exon
so has part: feature:640392-640552:1:exon
so has part: feature:641306-641421:1:exon
so has part: feature:643615-643736:1:exon
so has part: feature:644106-644232:1:exon
so has part: feature:645245-645331:1:exon
so has part: feature:647350-647427:1:exon
so has part: feature:647894-647964:1:exon
so has part: feature:648053-648165:1:exon
so has part: feature:648348-650556:1:exon

position:621315:1
position: 621315
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:621315-621547:1:exon

position:621547:1
position: 621547
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:626442-626557:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:630737-630873:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:631105-631226:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:632119-632188:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:635714-635783:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:636557-636654:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:638086-638162:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:638755-638785:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:640392-640552:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:641306-641421:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:643615-643736:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:644106-644232:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:645245-645331:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:647350-647427:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:647894-647964:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:648053-648165:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:648348-650556:1:exon

HGSNAT
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 419612
gene: HGSNAT
product: heparan-alpha-glucosaminide N-acetyltransferase, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 32 samples with support for all annotated introns
transcript id: XM_032468666.1
SIO_010081: HGSNAT
subclass of: SO_0000673
so part of: HGSNAT
location: join(621315..621547,626442..626557,630737..630873,631105..631226,632119..632188,635714..635783,636557..636654,638086..638162,638755..638785,640392..640552,641306..641421,643615..643736,644106..644232,645245..645331,647350..647427,647894..647964,648053..648165,648348..648543,648711..650556)
location: region:621315-650556:1
so has part: feature:621315-621547:1:exon
so has part: feature:626442-626557:1:exon
so has part: feature:630737-630873:1:exon
so has part: feature:631105-631226:1:exon
so has part: feature:632119-632188:1:exon
so has part: feature:635714-635783:1:exon
so has part: feature:636557-636654:1:exon
so has part: feature:638086-638162:1:exon
so has part: feature:638755-638785:1:exon
so has part: feature:640392-640552:1:exon
so has part: feature:641306-641421:1:exon
so has part: feature:643615-643736:1:exon
so has part: feature:644106-644232:1:exon
so has part: feature:645245-645331:1:exon
so has part: feature:647350-647427:1:exon
so has part: feature:647894-647964:1:exon
so has part: feature:648053-648165:1:exon
so has part: feature:648348-648543:1:exon
so has part: feature:648711-650556:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:621315-621547:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:626442-626557:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:630737-630873:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:631105-631226:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:632119-632188:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:635714-635783:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:636557-636654:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:638086-638162:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:638755-638785:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:640392-640552:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:641306-641421:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:643615-643736:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:644106-644232:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:645245-645331:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:647350-647427:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:647894-647964:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:648053-648165:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:648348-648543:1:exon

position:648543:1
position: 648543
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:648711-650556:1:exon

position:648711:1
position: 648711
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

HGSNAT
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 419612
gene: HGSNAT
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: heparan-alpha-glucosaminide N-acetyltransferase isoform X1
translation: MTGARPCAAEQRGPRERGGGGRGSGGSCAAAAGGMSGARGAGRALAALLLAASVLSAALLAPGGSPTPDVDKKRHVELKMDQALLLIHNELPGTNLTVYWNYDCCYQCLLQVLVRASRGGKPGKPSVAAVAVGTQHVSILRLNDTVEDKELCRLEYKFGEFGNYSLLVKHTPDGASEAACDLVVNEKPVDSDLPVTVAFLVGLALVIAVSFLKFLWSLEDFNNWISKAINSRETDRLINSELGSPSRAGDPQPEAWRPSAAPLRLRCLDTFRGMALTIMVFVNYGGGRYWYFKHSSWNGLTVADLVFPWFVFIMGSSIFLSMTSTLQRGCSKFRLLGKIAWRSFLLLCIGIVVVNPNYCLGPLSWEEARIPGVLQRLGVTYFVVAVLELLFFKPVPESCASERSCFSLLDVVSSWPQWLVIMALEGIWLALTFFLPVPGCPTGYLGPGGIGDLGKYPNCTGGAAGYIDRLLLGDHHIYQHPSSAVLYHTDVAYDPEGILGTINSIVMAFLGVQAGKILLYYKDRTKDILVRFTAWCCLLGLISVALTKASENEGFIPVNKNLWSISYVTTLSAFAFFILLVLYPVVDVHGLWTGTPFFYPGMNSILVYVGHEVFENYFPFQWRLGDSQSHKEHLVQNLVATALWVLIAYILYKKKVFWKI
SIO_010081: HGSNAT
subclass of: SO_0000673
so part of: HGSNAT
location: join(621343..621547,626442..626557,630737..630873,631105..631226,632119..632188,635714..635783,636557..636654,638086..638162,638755..638785,640392..640552,641306..641421,643615..643736,644106..644232,645245..645331,647350..647427,647894..647964,648053..648165,648348..648529)
location: region:621343-648529:1
so has part: feature:621343-621547:1:exon
so has part: feature:626442-626557:1:exon
so has part: feature:630737-630873:1:exon
so has part: feature:631105-631226:1:exon
so has part: feature:632119-632188:1:exon
so has part: feature:635714-635783:1:exon
so has part: feature:636557-636654:1:exon
so has part: feature:638086-638162:1:exon
so has part: feature:638755-638785:1:exon
so has part: feature:640392-640552:1:exon
so has part: feature:641306-641421:1:exon
so has part: feature:643615-643736:1:exon
so has part: feature:644106-644232:1:exon
so has part: feature:645245-645331:1:exon
so has part: feature:647350-647427:1:exon
so has part: feature:647894-647964:1:exon
so has part: feature:648053-648165:1:exon
so has part: feature:648348-648529:1:exon

XP_032324556.1
type: Protein
SIO_000068: ncbiprotein

position:621343:1
position: 621343
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:621343-621547:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:626442-626557:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:630737-630873:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:631105-631226:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:632119-632188:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:635714-635783:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:636557-636654:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:638086-638162:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:638755-638785:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:640392-640552:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:641306-641421:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:643615-643736:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:644106-644232:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:645245-645331:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:647350-647427:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:647894-647964:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:648053-648165:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:648348-648529:1:exon

HGSNAT
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 419612
gene: HGSNAT
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: heparan-alpha-glucosaminide N-acetyltransferase isoform X1
translation: MTGARPCAAEQRGPRERGGGGRGSGGSCAAAAGGMSGARGAGRALAALLLAASVLSAALLAPGGSPTPDVDKKRHVELKMDQALLLIHNELPGTNLTVYWNYDCCYQCLLQVLVRASRGGKPGKPSVAAVAVGTQHVSILRLNDTVEDKELCRLEYKFGEFGNYSLLVKHTPDGASEAACDLVVNEKPVDSDLPVTVAFLVGLALVIAVSFLKFLWSLEDFNNWISKAINSRETDRLINSELGSPSRAGDPQPEAWRPSAAPLRLRCLDTFRGMALTIMVFVNYGGGRYWYFKHSSWNGLTVADLVFPWFVFIMGSSIFLSMTSTLQRGCSKFRLLGKIAWRSFLLLCIGIVVVNPNYCLGPLSWEEARIPGVLQRLGVTYFVVAVLELLFFKPVPESCASERSCFSLLDVVSSWPQWLVIMALEGIWLALTFFLPVPGCPTGYLGPGGIGDLGKYPNCTGGAAGYIDRLLLGDHHIYQHPSSAVLYHTDVAYDPEGILGTINSIVMAFLGVQAGKILLYYKDRTKDILVRFTAWCCLLGLISVALTKASENEGFIPVNKNLWSISYVTTLSAFAFFILLVLYPVVDVHGLWTGTPFFYPGMNSILVYVGHEVFENYFPFQWRLGDSQSHKEHLVQNLVATALWVLIAYILYKKKVFWKI
SIO_010081: HGSNAT
subclass of: SO_0000673
so part of: HGSNAT
location: join(621343..621547,626442..626557,630737..630873,631105..631226,632119..632188,635714..635783,636557..636654,638086..638162,638755..638785,640392..640552,641306..641421,643615..643736,644106..644232,645245..645331,647350..647427,647894..647964,648053..648165,648348..648529)
location: region:621343-648529:1
so has part: feature:621343-621547:1:exon
so has part: feature:626442-626557:1:exon
so has part: feature:630737-630873:1:exon
so has part: feature:631105-631226:1:exon
so has part: feature:632119-632188:1:exon
so has part: feature:635714-635783:1:exon
so has part: feature:636557-636654:1:exon
so has part: feature:638086-638162:1:exon
so has part: feature:638755-638785:1:exon
so has part: feature:640392-640552:1:exon
so has part: feature:641306-641421:1:exon
so has part: feature:643615-643736:1:exon
so has part: feature:644106-644232:1:exon
so has part: feature:645245-645331:1:exon
so has part: feature:647350-647427:1:exon
so has part: feature:647894-647964:1:exon
so has part: feature:648053-648165:1:exon
so has part: feature:648348-648529:1:exon

XP_032324557.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:621343-621547:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:626442-626557:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:630737-630873:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:631105-631226:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:632119-632188:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:635714-635783:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:636557-636654:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:638086-638162:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:638755-638785:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:640392-640552:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:641306-641421:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:643615-643736:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:644106-644232:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:645245-645331:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:647350-647427:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:647894-647964:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:648053-648165:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:648348-648529:1:exon

HGSNAT
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 419612
gene: HGSNAT
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: heparan-alpha-glucosaminide N-acetyltransferase isoform X3
translation: MDQALLLIHNELPGTNLTVYWNYDCCYQCLLQVLVRASRGGKPGKPSVAAVAVGTQHVSILRLNDTVEDKELCRLEYKFGEFGNYSLLVKHTPDGASEAACDLVVNEKPVDSDLPVTVAFLVGLALVIAVSFLKFLWSLEDFNNWISKAINSRETDRLINSELGSPSRAGDPQPEAWRPSAAPLRLRCLDTFRGMALTIMVFVNYGGGRYWYFKHSSWNGLTVADLVFPWFVFIMGSSIFLSMTSTLQRGCSKFRLLGKIAWRSFLLLCIGIVVVNPNYCLGPLSWEEARIPGVLQRLGVTYFVVAVLELLFFKPVPESCASERSCFSLLDVVSSWPQWLVIMALEGIWLALTFFLPVPGCPTGYLGPGGIGDLGKYPNCTGGAAGYIDRLLLGDHHIYQHPSSAVLYHTDVAYDPEGILGTINSIVMAFLGVQAGKILLYYKDRTKDILVRFTAWCCLLGLISVALTKASENEGFIPVNKNLWSISYVTTLSAFAFFILLVLYPVVDVHGLWTGTPFFYPGMNSILVYVGHEVFENYFPFQWRLGDSQSHKEHLVQNLVATALWVLIAYILYKKKVFWKI
SIO_010081: HGSNAT
subclass of: SO_0000673
so part of: HGSNAT
location: join(626474..626557,630737..630873,631105..631226,632119..632188,635714..635783,636557..636654,638086..638162,638755..638785,640392..640552,641306..641421,643615..643736,644106..644232,645245..645331,647350..647427,647894..647964,648053..648165,648348..648529)
location: region:626474-648529:1
so has part: feature:626474-626557:1:exon
so has part: feature:630737-630873:1:exon
so has part: feature:631105-631226:1:exon
so has part: feature:632119-632188:1:exon
so has part: feature:635714-635783:1:exon
so has part: feature:636557-636654:1:exon
so has part: feature:638086-638162:1:exon
so has part: feature:638755-638785:1:exon
so has part: feature:640392-640552:1:exon
so has part: feature:641306-641421:1:exon
so has part: feature:643615-643736:1:exon
so has part: feature:644106-644232:1:exon
so has part: feature:645245-645331:1:exon
so has part: feature:647350-647427:1:exon
so has part: feature:647894-647964:1:exon
so has part: feature:648053-648165:1:exon
so has part: feature:648348-648529:1:exon

XP_032324558.1
type: Protein
SIO_000068: ncbiprotein

position:626474:1
position: 626474
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:626474-626557:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:630737-630873:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:631105-631226:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:632119-632188:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:635714-635783:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:636557-636654:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:638086-638162:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:638755-638785:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:640392-640552:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:641306-641421:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:643615-643736:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:644106-644232:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:645245-645331:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:647350-647427:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:647894-647964:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:648053-648165:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:648348-648529:1:exon

INTS10
type: Gene
subclass of: SO_0000704
RO_0002162: 419612
gene: INTS10
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(655114..688033)
location: region:655114-688033:-1
so has part: feature:655114-688033:-1:exon
subclass of: SO_0000010

102515187
type: Gene
SIO_000068: ncbigene

position:655114:-1
position: 655114
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:688033:-1
position: 688033
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:655114-688033:-1:exon

INTS10
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 419612
gene: INTS10
product: integrator complex subunit 10, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 32 samples with support for all annotated introns
transcript id: XM_032468330.1
SIO_010081: INTS10
subclass of: SO_0000673
so part of: INTS10
location: complement(join(655114..655567,660370..660463,661413..661575,662369..662448,667475..667583,670525..670677,671390..671472,672776..672929,679617..679750,680528..680697,681169..681340,681768..681908,682399..682480,684699..684838,685548..685651,686991..687058,687809..688033))
location: region:655114-688033:-1
so has part: feature:687809-688033:-1:exon
so has part: feature:686991-687058:-1:exon
so has part: feature:685548-685651:-1:exon
so has part: feature:684699-684838:-1:exon
so has part: feature:682399-682480:-1:exon
so has part: feature:681768-681908:-1:exon
so has part: feature:681169-681340:-1:exon
so has part: feature:680528-680697:-1:exon
so has part: feature:679617-679750:-1:exon
so has part: feature:672776-672929:-1:exon
so has part: feature:671390-671472:-1:exon
so has part: feature:670525-670677:-1:exon
so has part: feature:667475-667583:-1:exon
so has part: feature:662369-662448:-1:exon
so has part: feature:661413-661575:-1:exon
so has part: feature:660370-660463:-1:exon
so has part: feature:655114-655567:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:687809-688033:-1:exon

position:687809:-1
position: 687809
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:686991-687058:-1:exon

position:686991:-1
position: 686991
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:687058:-1
position: 687058
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:685548-685651:-1:exon

position:685548:-1
position: 685548
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:685651:-1
position: 685651
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:684699-684838:-1:exon

position:684699:-1
position: 684699
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:684838:-1
position: 684838
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:682399-682480:-1:exon

position:682399:-1
position: 682399
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:682480:-1
position: 682480
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:681768-681908:-1:exon

position:681768:-1
position: 681768
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:681908:-1
position: 681908
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:681169-681340:-1:exon

position:681169:-1
position: 681169
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:681340:-1
position: 681340
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:680528-680697:-1:exon

position:680528:-1
position: 680528
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:680697:-1
position: 680697
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:679617-679750:-1:exon

position:679617:-1
position: 679617
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:679750:-1
position: 679750
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:672776-672929:-1:exon

position:672776:-1
position: 672776
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:672929:-1
position: 672929
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:671390-671472:-1:exon

position:671390:-1
position: 671390
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:671472:-1
position: 671472
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:670525-670677:-1:exon

position:670525:-1
position: 670525
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:670677:-1
position: 670677
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:667475-667583:-1:exon

position:667475:-1
position: 667475
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:667583:-1
position: 667583
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:662369-662448:-1:exon

position:662369:-1
position: 662369
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:662448:-1
position: 662448
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:661413-661575:-1:exon

position:661413:-1
position: 661413
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:661575:-1
position: 661575
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:660370-660463:-1:exon

position:660370:-1
position: 660370
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:660463:-1
position: 660463
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:655114-655567:-1:exon

position:655567:-1
position: 655567
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

INTS10
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 419612
gene: INTS10
product: integrator complex subunit 10, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 40 samples with support for all annotated introns
transcript id: XM_032468331.1
SIO_010081: INTS10
subclass of: SO_0000673
so part of: INTS10
location: complement(join(655114..655477,657595..657672,660370..660463,661413..661575,662369..662448,667475..667583,670525..670677,671390..671472,672776..672929,679617..679750,680528..680697,681169..681340,681768..681908,682399..682480,684699..684838,685548..685651,686991..687058,687809..688033))
location: region:655114-688033:-1
so has part: feature:687809-688033:-1:exon
so has part: feature:686991-687058:-1:exon
so has part: feature:685548-685651:-1:exon
so has part: feature:684699-684838:-1:exon
so has part: feature:682399-682480:-1:exon
so has part: feature:681768-681908:-1:exon
so has part: feature:681169-681340:-1:exon
so has part: feature:680528-680697:-1:exon
so has part: feature:679617-679750:-1:exon
so has part: feature:672776-672929:-1:exon
so has part: feature:671390-671472:-1:exon
so has part: feature:670525-670677:-1:exon
so has part: feature:667475-667583:-1:exon
so has part: feature:662369-662448:-1:exon
so has part: feature:661413-661575:-1:exon
so has part: feature:660370-660463:-1:exon
so has part: feature:657595-657672:-1:exon
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INTS10
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 419612
gene: INTS10
product: integrator complex subunit 10, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 14 samples with support for all annotated introns
transcript id: XM_032468326.1
SIO_010081: INTS10
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so part of: INTS10
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INTS10
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 419612
gene: INTS10
product: integrator complex subunit 10, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 31 samples with support for all annotated introns
transcript id: XM_032468329.1
SIO_010081: INTS10
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so part of: INTS10
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INTS10
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 419612
gene: INTS10
product: integrator complex subunit 10, transcript variant X8
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 40 samples with support for all annotated introns
transcript id: XM_032468334.1
SIO_010081: INTS10
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INTS10
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 419612
gene: INTS10
product: integrator complex subunit 10, transcript variant X7
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 11 samples with support for all annotated introns
transcript id: XM_032468333.1
SIO_010081: INTS10
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INTS10
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 419612
gene: INTS10
product: integrator complex subunit 10, transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_032468332.1
SIO_010081: INTS10
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INTS10
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subclass of: SO_0000234
RO_0002162: 419612
gene: INTS10
product: integrator complex subunit 10, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_032468328.1
SIO_010081: INTS10
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urn:…
SIO_000300: 2
SIO_000628: feature:686991-687058:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:685548-685651:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:684699-684838:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:682399-682480:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:681768-681908:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:681169-681340:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:680528-680697:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:679617-679750:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:672776-672929:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:671390-671472:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:670525-670677:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:667475-667583:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:662369-662448:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:661413-661575:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:660370-660463:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:657595-657672:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:655114-655567:-1:exon

INTS10
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 419612
gene: INTS10
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: integrator complex subunit 10 isoform X7
translation: MSAQGDCEFLVQRARELVQQDLWAAKAWLITARSLYPADFNIQYEMYSIERNAERTATAGRLLYDMFVNFPDQPVVWREISIITSALRNDSQDKQTQFLRSLFETLPGRVQCEMLLKVTEQCFNTLERSEMLLLLLRRFPETVVQHGVGLGEALLEAETIEEQESPVNCFRKLFVCDVLPLIINNHDVRLPANLLYKYLNKAAEFYINYVTRSTQTENQHQGAQETSDLMSPSKRSSQKYIIEGLTEKSSQIVDPWERLFKILNVVGMRCEWQMDKGRRSYGDILHRMKDLCRYMNNFDNEAHAKYKNQVVYSTMLVFFKNAFQYVSSIQPSLFQGPNAPSQVPLVLLEDVSNVYGDVEVDRNKHIHKKRKLAEGREKPMSSDDEDCPAKGRNRHIVVNKAELANSIEVLESFKLARESWELLYSLEFLDKEFTRICLAWKTDTWLWLRIFLNDMIIYQGQYKKAIASLHHLAALQGSVPQPQISGQGTLEHQRALIQLATCHFALGEYRTTCEKVLDLMCHMVLPIQDGGKPQEEPSKVKPKFRKGSDLKLLPCTSKAIMPYCLHLMLACFKLRAFTDSRDDMALGHVIVLLQQEWPRGETLFLKAVSKICQQGNFQYENFFNYVTNIDMLEEFAYLRTQEGGKIHLELLPNQGMLIKHHTVTRGITKGVKEDFRLAMERQVSRCGENLMLVLHRFCVNEKVLLLQTLA
SIO_010081: INTS10
subclass of: SO_0000673
so part of: INTS10
location: complement(join(655321..655477,660370..660463,661413..661575,662369..662448,667475..667583,670525..670677,671390..671472,672776..672929,679617..679750,680528..680697,681169..681340,681768..681908,682399..682480,684699..684838,685548..685651,686991..687058,687809..687937))
location: region:655321-687937:-1
so has part: feature:687809-687937:-1:exon
so has part: feature:686991-687058:-1:exon
so has part: feature:685548-685651:-1:exon
so has part: feature:684699-684838:-1:exon
so has part: feature:682399-682480:-1:exon
so has part: feature:681768-681908:-1:exon
so has part: feature:681169-681340:-1:exon
so has part: feature:680528-680697:-1:exon
so has part: feature:679617-679750:-1:exon
so has part: feature:672776-672929:-1:exon
so has part: feature:671390-671472:-1:exon
so has part: feature:670525-670677:-1:exon
so has part: feature:667475-667583:-1:exon
so has part: feature:662369-662448:-1:exon
so has part: feature:661413-661575:-1:exon
so has part: feature:660370-660463:-1:exon
so has part: feature:655321-655477:-1:exon

XP_032324225.1
type: Protein
SIO_000068: ncbiprotein

position:655321:-1
position: 655321
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:687937:-1
position: 687937
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:687809-687937:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:686991-687058:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:685548-685651:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:684699-684838:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:682399-682480:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:681768-681908:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:681169-681340:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:680528-680697:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:679617-679750:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:672776-672929:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:671390-671472:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:670525-670677:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:667475-667583:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:662369-662448:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:661413-661575:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:660370-660463:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:655321-655477:-1:exon

INTS10
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 419612
gene: INTS10
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: integrator complex subunit 10 isoform X4
translation: MSAQGDCEFLVQRARELVQQDLWAAKAWLITARSLYPADFNIQYEMYSIERNAERTATAGRLLYDMFVNFPDQPVVWREISIITSALRNDSQDKQTQFLRSLFETLPGRVQCEMLLKVTEQCFNTLERSEMLLLLLRRFPETVVQHGVGLGEALLEAETIEEQESPVNCFRKLFVCDVLPLIINNHDVRLPANLLYKYLNKAAEFYINYVTRSTQTENQHQGAQETSDLMSPSKRSSQKYIIEGLTEKSSQIVDPWERLFKILNVVGMRCEWQMDKGRRSYGDILHRMKDLCRYMNNFDNEAHAKYKNQVVYSTMLVFFKNAFQYVSSIQPSLFQGPNAPSQVPLVLLEDVSNVYGDVEVDRNKHIHKKRKLAEGREKPMSSDDEDCPAKGRNRHIVVNKAELANSIEVLESFKLARESWELLYSLEFLDKEFTRICLAWKTDTWLWLRIFLNDMIIYQGQYKKAIASLHHLAALQGSVPQPQISGQGTLEHQRALIQLATCHFALGEYRTTCEKVLDLMCHMVLPIQDGGKPQEEPSKVKPKFRKGSDLKLLPCTSKAIMPYCLHLMLACFKLRAFTDSRDDMALGHVIVLLQQEWPRGETLFLKAVSKICQQGNFQYENFFNYVTNIDMLEEFAYLRTQEGGKIHLELLPNQGMLIKIWGRLDPAPEPRPGGLLTVPPVCLPVAAPRHHTVTRGITKGVKEDFRLAMERQVSRCGENLMLVLHRFCVNEKVLLLQTLA
SIO_010081: INTS10
subclass of: SO_0000673
so part of: INTS10
location: complement(join(655321..655567,660370..660463,661413..661575,662369..662448,667475..667583,670525..670677,671390..671472,672776..672929,679617..679750,680528..680697,681169..681340,681768..681908,682399..682480,684699..684838,685548..685651,686991..687058,687809..687937))
location: region:655321-687937:-1
so has part: feature:687809-687937:-1:exon
so has part: feature:686991-687058:-1:exon
so has part: feature:685548-685651:-1:exon
so has part: feature:684699-684838:-1:exon
so has part: feature:682399-682480:-1:exon
so has part: feature:681768-681908:-1:exon
so has part: feature:681169-681340:-1:exon
so has part: feature:680528-680697:-1:exon
so has part: feature:679617-679750:-1:exon
so has part: feature:672776-672929:-1:exon
so has part: feature:671390-671472:-1:exon
so has part: feature:670525-670677:-1:exon
so has part: feature:667475-667583:-1:exon
so has part: feature:662369-662448:-1:exon
so has part: feature:661413-661575:-1:exon
so has part: feature:660370-660463:-1:exon
so has part: feature:655321-655567:-1:exon

XP_032324221.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:687809-687937:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:686991-687058:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:685548-685651:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:684699-684838:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:682399-682480:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:681768-681908:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:681169-681340:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:680528-680697:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:679617-679750:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:672776-672929:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:671390-671472:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:670525-670677:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:667475-667583:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:662369-662448:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:661413-661575:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:660370-660463:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:655321-655567:-1:exon

INTS10
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 419612
gene: INTS10
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: integrator complex subunit 10 isoform X5
translation: MSAQGDCEFLVQRARELVQQDLWAAKAWLITARSLYPADFNIQYEMYSIERNAERTATAGRLLYDMFVNFPDQPVVWREISIITSALRNDSQDKQTQFLRSLFETLPGRVQCEMLLKVTEQCFNTLERSEMLLLLLRRFPETVVQHGVGLGEALLEAETIEEQESPVNCFRKLFVCDVLPLIINNHDVRLPANLLYKYLNKAAEFYINYVTRSTQTENQHQGAQETSDLMSPSKRSSQKYIIEGLTEKSSQIVDPWERLFKILNVVGMRCEWQMDKGRRSYGDILHRMKDLCRYMNNFDNEAHAKYKNQVVYSTMLVFFKNAFQYVSSIQPSLFQGPNAPSQVPLVLLEDVSNVYGDVEVDRNKHIHKKRKLAEGREKPMSSDDEDCPAKGRNRHIVVNKAELANSIEVLESFKLARESWELLYSLEFLDKEFTRICLAWKTDTWLWLRIFLNDMIIYQGQYKKAIASLHHLAALQGSVPQPQISGQGTLEHQRALIQLATCHFALGEYRTTCEKVLDLMCHMVLPIQDGGKPQEEPSKVKPKFRKGSDLKLLPCTSKAIMPYCLHLMLACFKLRAFTDSRDDMALGHVIVLLQQEWPRGETLFLKAVSKICQQGNFQYENFFNYVTNIDMLEEFAYLRTQEGGKIHLELLPNQGMLIKPSSPPMGLLQQEFLPVLQPSIQTADRHHTVTRGITKGVKEDFRLAMERQVSRCGENLMLVLHRFCVNEKVLLLQTLA
SIO_010081: INTS10
subclass of: SO_0000673
so part of: INTS10
location: complement(join(655321..655477,657595..657672,660370..660463,661413..661575,662369..662448,667475..667583,670525..670677,671390..671472,672776..672929,679617..679750,680528..680697,681169..681340,681768..681908,682399..682480,684699..684838,685548..685651,686991..687058,687809..687937))
location: region:655321-687937:-1
so has part: feature:687809-687937:-1:exon
so has part: feature:686991-687058:-1:exon
so has part: feature:685548-685651:-1:exon
so has part: feature:684699-684838:-1:exon
so has part: feature:682399-682480:-1:exon
so has part: feature:681768-681908:-1:exon
so has part: feature:681169-681340:-1:exon
so has part: feature:680528-680697:-1:exon
so has part: feature:679617-679750:-1:exon
so has part: feature:672776-672929:-1:exon
so has part: feature:671390-671472:-1:exon
so has part: feature:670525-670677:-1:exon
so has part: feature:667475-667583:-1:exon
so has part: feature:662369-662448:-1:exon
so has part: feature:661413-661575:-1:exon
so has part: feature:660370-660463:-1:exon
so has part: feature:657595-657672:-1:exon
so has part: feature:655321-655477:-1:exon

XP_032324222.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:687809-687937:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:686991-687058:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:685548-685651:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:684699-684838:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:682399-682480:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:681768-681908:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:681169-681340:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:680528-680697:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:679617-679750:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:672776-672929:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:671390-671472:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:670525-670677:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:667475-667583:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:662369-662448:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:661413-661575:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:660370-660463:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:657595-657672:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:655321-655477:-1:exon

INTS10
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 419612
gene: INTS10
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: integrator complex subunit 10 isoform X1
translation: MSAQGDCEFLVQRARELVQQDLWAAKAWLITARSLYPADFNIQYEMYSIERNAERTATAGRLLYDMFVNFPDQPVVWREISIITSALRNDSQDKQTQFLRSLFETLPGRVQCEMLLKVTEQCFNTLERSEMLLLLLRRFPETVVQHGVGLGEALLEAETIEEQESPVNCFRKLFVCDVLPLIINNHDVRLPANLLYKYLNKAAEFYINYVTRSTQTENQHQGAQETSDLMSPSKRSSQKYIIEGLTEKSSQIVDPWERLFKILNVVGMRCEWQMDKGRRSYGDILHRMKDLCRYMNNFDNEAHAKYKNQVVYSTMLVFFKNAFQYVSSIQPSLFQGPNAPSQVPLVLLEDVSNVYGDVEVDRNKHIHKKRKLAEGREKPMSSDDEDCPAKGRNRHIVVNKAELANSIEVLESFKLARESWELLYSLEFLDKEFTRICLAWKTDTWLWLRIFLNDMIIYQGQYKKAIASLHHLAALQGSVPQPQISGQGTLEHQRALIQLATCHFALGEYRTTCEKVLDLMCHMVLPIQDGGKPQEEPSKVKPKFRKGSDLKLLPCTSKAIMPYCLHLMLACFKLRAFTDSRDDMALGHVIVLLQQEWPRGETLFLKAVSKICQQGNFQYENFFNYVTNIDMLEEFAYLRTQEGGKIHLELLPNQGMLIKPSSPPMGLLQQEFLPVLQPSIQTADRIWGRLDPAPEPRPGGLLTVPPVCLPVAAPRHHTVTRGITKGVKEDFRLAMERQVSRCGENLMLVLHRFCVNEKVLLLQTLA
SIO_010081: INTS10
subclass of: SO_0000673
so part of: INTS10
location: complement(join(655321..655567,657595..657672,660370..660463,661413..661575,662369..662448,667475..667583,670525..670677,671390..671472,672776..672929,679617..679750,680528..680697,681169..681340,681768..681908,682399..682480,684699..684838,685548..685651,686991..687058,687809..687937))
location: region:655321-687937:-1
so has part: feature:687809-687937:-1:exon
so has part: feature:686991-687058:-1:exon
so has part: feature:685548-685651:-1:exon
so has part: feature:684699-684838:-1:exon
so has part: feature:682399-682480:-1:exon
so has part: feature:681768-681908:-1:exon
so has part: feature:681169-681340:-1:exon
so has part: feature:680528-680697:-1:exon
so has part: feature:679617-679750:-1:exon
so has part: feature:672776-672929:-1:exon
so has part: feature:671390-671472:-1:exon
so has part: feature:670525-670677:-1:exon
so has part: feature:667475-667583:-1:exon
so has part: feature:662369-662448:-1:exon
so has part: feature:661413-661575:-1:exon
so has part: feature:660370-660463:-1:exon
so has part: feature:657595-657672:-1:exon
so has part: feature:655321-655567:-1:exon

XP_032324217.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:687809-687937:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:686991-687058:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:685548-685651:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:684699-684838:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:682399-682480:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:681768-681908:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:681169-681340:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:680528-680697:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:679617-679750:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:672776-672929:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:671390-671472:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:670525-670677:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:667475-667583:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:662369-662448:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:661413-661575:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:660370-660463:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:657595-657672:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:655321-655567:-1:exon

INTS10
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 419612
gene: INTS10
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: integrator complex subunit 10 isoform X3
translation: MSAQGDCEFLVQRARELVQQDLWAAKAWLITARSLYPADFNIQYEMYSIERNAERTATAGRLLYDMFVNFPDQPVVWREISIITSALRNDSQDKQTQFLRSLFETLPGRVQCEMLLKVTEQCFNTLERSEMLLLLLRRFPETVVQHGVGLGEALLEAETIEEQESPVNCFRKLFVCDVLPLIINNHDVRLPANLLYKYLNKAAEFYINYVTRSTQTENQHQGAQETSDLMSPSKRSSQKYIIEGLTEKSSQIVDPWERLFKILNVVGMRCEWQMDKGRRSYGDILHRMKDLCRYMNNFDNEAHAKYKNQVVYSTMLVFFKNAFQYVSSIQPSLFQGPNAPSQVPLVLLEDVSNVYGDVEVDRNKHIHKKRKLAEGREKPMSSDDEDCPAKGRNRHIVVNKAELANSIEVLESFKLARESWELLYSLEFLDKEFTRICLAWKTDTWLWLRIFLNDMIIYQGQYKKAIASLHHLAALQGSVPQPQISGQGTLEHQRALIQLATCHFALGEYRTTCEKVLDLMCHMVLPIQDGGKPQEEPSKVKPKFRKGSDLKLLPCTSKAIMPYCLHLMLACFKLRAFTDSRDDMALGHVIVLLQQEWPRGETLFLKAVSKICQQGNFQYENFFNYVTNIDMLEEFAYLRTQEGGKIHLELLPNQGMLIKPSSPPMGLLQQEFLPVLQPSIQTADRYHVATPAHSVLFVRLFSCPWHHTVTRGITKGVKEDFRLAMERQVSRCGENLMLVLHRFCVNEKVLLLQTLA
SIO_010081: INTS10
subclass of: SO_0000673
so part of: INTS10
location: complement(join(655321..655477,657535..657672,660370..660463,661413..661575,662369..662448,667475..667583,670525..670677,671390..671472,672776..672929,679617..679750,680528..680697,681169..681340,681768..681908,682399..682480,684699..684838,685548..685651,686991..687058,687809..687937))
location: region:655321-687937:-1
so has part: feature:687809-687937:-1:exon
so has part: feature:686991-687058:-1:exon
so has part: feature:685548-685651:-1:exon
so has part: feature:684699-684838:-1:exon
so has part: feature:682399-682480:-1:exon
so has part: feature:681768-681908:-1:exon
so has part: feature:681169-681340:-1:exon
so has part: feature:680528-680697:-1:exon
so has part: feature:679617-679750:-1:exon
so has part: feature:672776-672929:-1:exon
so has part: feature:671390-671472:-1:exon
so has part: feature:670525-670677:-1:exon
so has part: feature:667475-667583:-1:exon
so has part: feature:662369-662448:-1:exon
so has part: feature:661413-661575:-1:exon
so has part: feature:660370-660463:-1:exon
so has part: feature:657535-657672:-1:exon
so has part: feature:655321-655477:-1:exon

XP_032324220.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:687809-687937:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:686991-687058:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:685548-685651:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:684699-684838:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:682399-682480:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:681768-681908:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:681169-681340:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:680528-680697:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:679617-679750:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:672776-672929:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:671390-671472:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:670525-670677:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:667475-667583:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:662369-662448:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:661413-661575:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:660370-660463:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:657535-657672:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:655321-655477:-1:exon

INTS10
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 419612
gene: INTS10
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: integrator complex subunit 10 isoform X6
translation: MRCTASSAMRSGRPLPGDCSTTYQPVVWREISIITSALRNDSQDKQTQFLRSLFETLPGRVQCEMLLKVTEQCFNTLERSEMLLLLLRRFPETVVQHGVGLGEALLEAETIEEQESPVNCFRKLFVCDVLPLIINNHDVRLPANLLYKYLNKAAEFYINYVTRSTQTENQHQGAQETSDLMSPSKRSSQKYIIEGLTEKSSQIVDPWERLFKILNVVGMRCEWQMDKGRRSYGDILHRMKDLCRYMNNFDNEAHAKYKNQVVYSTMLVFFKNAFQYVSSIQPSLFQGPNAPSQVPLVLLEDVSNVYGDVEVDRNKHIHKKRKLAEGREKPMSSDDEDCPAKGRNRHIVVNKAELANSIEVLESFKLARESWELLYSLEFLDKEFTRICLAWKTDTWLWLRIFLNDMIIYQGQYKKAIASLHHLAALQGSVPQPQISGQGTLEHQRALIQLATCHFALGEYRTTCEKVLDLMCHMVLPIQDGGKPQEEPSKVKPKFRKGSDLKLLPCTSKAIMPYCLHLMLACFKLRAFTDSRDDMALGHVIVLLQQEWPRGETLFLKAVSKICQQGNFQYENFFNYVTNIDMLEEFAYLRTQEGGKIHLELLPNQGMLIKPSSPPMGLLQQEFLPVLQPSIQTADRIWGRLDPAPEPRPGGLLTVPPVCLPVAAPRHHTVTRGITKGVKEDFRLAMERQVSRCGENLMLVLHRFCVNEKVLLLQTLA
SIO_010081: INTS10
subclass of: SO_0000673
so part of: INTS10
location: complement(join(655321..655567,657595..657672,660370..660463,661413..661575,662369..662448,667475..667583,670525..670677,671390..671472,672776..672929,679617..679750,680528..680697,681169..681340,681768..681908,682399..682480,684699..684838,685548..685634,686991..687057))
location: region:655321-687057:-1
so has part: feature:686991-687057:-1:exon
so has part: feature:685548-685634:-1:exon
so has part: feature:684699-684838:-1:exon
so has part: feature:682399-682480:-1:exon
so has part: feature:681768-681908:-1:exon
so has part: feature:681169-681340:-1:exon
so has part: feature:680528-680697:-1:exon
so has part: feature:679617-679750:-1:exon
so has part: feature:672776-672929:-1:exon
so has part: feature:671390-671472:-1:exon
so has part: feature:670525-670677:-1:exon
so has part: feature:667475-667583:-1:exon
so has part: feature:662369-662448:-1:exon
so has part: feature:661413-661575:-1:exon
so has part: feature:660370-660463:-1:exon
so has part: feature:657595-657672:-1:exon
so has part: feature:655321-655567:-1:exon

XP_032324224.1
type: Protein
SIO_000068: ncbiprotein

position:687057:-1
position: 687057
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:686991-687057:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:685548-685634:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:684699-684838:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:682399-682480:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:681768-681908:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:681169-681340:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:680528-680697:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:679617-679750:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:672776-672929:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:671390-671472:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:670525-670677:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:667475-667583:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:662369-662448:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:661413-661575:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:660370-660463:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:657595-657672:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:655321-655567:-1:exon

INTS10
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 419612
gene: INTS10
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: integrator complex subunit 10 isoform X2
translation: MYSIERNAERTATAGRLLYDMFVNFPDQPVVWREISIITSALRNDSQDKQTQFLRSLFETLPGRVQCEMLLKVTEQCFNTLERSEMLLLLLRRFPETVVQHGVGLGEALLEAETIEEQESPVNCFRKLFVCDVLPLIINNHDVRLPANLLYKYLNKAAEFYINYVTRSTQTENQHQGAQETSDLMSPSKRSSQKYIIEGLTEKSSQIVDPWERLFKILNVVGMRCEWQMDKGRRSYGDILHRMKDLCRYMNNFDNEAHAKYKNQVVYSTMLVFFKNAFQYVSSIQPSLFQGPNAPSQVPLVLLEDVSNVYGDVEVDRNKHIHKKRKLAEGREKPMSSDDEDCPAKGRNRHIVVNKAELANSIEVLESFKLARESWELLYSLEFLDKEFTRICLAWKTDTWLWLRIFLNDMIIYQGQYKKAIASLHHLAALQGSVPQPQISGQGTLEHQRALIQLATCHFALGEYRTTCEKVLDLMCHMVLPIQDGGKPQEEPSKVKPKFRKGSDLKLLPCTSKAIMPYCLHLMLACFKLRAFTDSRDDMALGHVIVLLQQEWPRGETLFLKAVSKICQQGNFQYENFFNYVTNIDMLEEFAYLRTQEGGKIHLELLPNQGMLIKPSSPPMGLLQQEFLPVLQPSIQTADRIWGRLDPAPEPRPGGLLTVPPVCLPVAAPRHHTVTRGITKGVKEDFRLAMERQVSRCGENLMLVLHRFCVNEKVLLLQTLA
SIO_010081: INTS10
subclass of: SO_0000673
so part of: INTS10
location: complement(join(655321..655567,657595..657672,660370..660463,661413..661575,662369..662448,667475..667583,670525..670677,671390..671472,672776..672929,679617..679750,680528..680697,681169..681340,681768..681908,682399..682480,684699..684838,685548..685651,686991..687052))
location: region:655321-687052:-1
so has part: feature:686991-687052:-1:exon
so has part: feature:685548-685651:-1:exon
so has part: feature:684699-684838:-1:exon
so has part: feature:682399-682480:-1:exon
so has part: feature:681768-681908:-1:exon
so has part: feature:681169-681340:-1:exon
so has part: feature:680528-680697:-1:exon
so has part: feature:679617-679750:-1:exon
so has part: feature:672776-672929:-1:exon
so has part: feature:671390-671472:-1:exon
so has part: feature:670525-670677:-1:exon
so has part: feature:667475-667583:-1:exon
so has part: feature:662369-662448:-1:exon
so has part: feature:661413-661575:-1:exon
so has part: feature:660370-660463:-1:exon
so has part: feature:657595-657672:-1:exon
so has part: feature:655321-655567:-1:exon

XP_032324219.1
type: Protein
SIO_000068: ncbiprotein

position:687052:-1
position: 687052
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:686991-687052:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:685548-685651:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:684699-684838:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:682399-682480:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:681768-681908:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:681169-681340:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:680528-680697:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:679617-679750:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:672776-672929:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:671390-671472:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:670525-670677:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:667475-667583:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:662369-662448:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:661413-661575:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:660370-660463:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:657595-657672:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:655321-655567:-1:exon

INTS10
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 419612
gene: INTS10
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: integrator complex subunit 10 isoform X2
translation: MYSIERNAERTATAGRLLYDMFVNFPDQPVVWREISIITSALRNDSQDKQTQFLRSLFETLPGRVQCEMLLKVTEQCFNTLERSEMLLLLLRRFPETVVQHGVGLGEALLEAETIEEQESPVNCFRKLFVCDVLPLIINNHDVRLPANLLYKYLNKAAEFYINYVTRSTQTENQHQGAQETSDLMSPSKRSSQKYIIEGLTEKSSQIVDPWERLFKILNVVGMRCEWQMDKGRRSYGDILHRMKDLCRYMNNFDNEAHAKYKNQVVYSTMLVFFKNAFQYVSSIQPSLFQGPNAPSQVPLVLLEDVSNVYGDVEVDRNKHIHKKRKLAEGREKPMSSDDEDCPAKGRNRHIVVNKAELANSIEVLESFKLARESWELLYSLEFLDKEFTRICLAWKTDTWLWLRIFLNDMIIYQGQYKKAIASLHHLAALQGSVPQPQISGQGTLEHQRALIQLATCHFALGEYRTTCEKVLDLMCHMVLPIQDGGKPQEEPSKVKPKFRKGSDLKLLPCTSKAIMPYCLHLMLACFKLRAFTDSRDDMALGHVIVLLQQEWPRGETLFLKAVSKICQQGNFQYENFFNYVTNIDMLEEFAYLRTQEGGKIHLELLPNQGMLIKPSSPPMGLLQQEFLPVLQPSIQTADRIWGRLDPAPEPRPGGLLTVPPVCLPVAAPRHHTVTRGITKGVKEDFRLAMERQVSRCGENLMLVLHRFCVNEKVLLLQTLA
SIO_010081: INTS10
subclass of: SO_0000673
so part of: INTS10
location: complement(join(655321..655567,657595..657672,660370..660463,661413..661575,662369..662448,667475..667583,670525..670677,671390..671472,672776..672929,679617..679750,680528..680697,681169..681340,681768..681908,682399..682480,684699..684838,685548..685651,686991..687052))
location: region:655321-687052:-1
so has part: feature:686991-687052:-1:exon
so has part: feature:685548-685651:-1:exon
so has part: feature:684699-684838:-1:exon
so has part: feature:682399-682480:-1:exon
so has part: feature:681768-681908:-1:exon
so has part: feature:681169-681340:-1:exon
so has part: feature:680528-680697:-1:exon
so has part: feature:679617-679750:-1:exon
so has part: feature:672776-672929:-1:exon
so has part: feature:671390-671472:-1:exon
so has part: feature:670525-670677:-1:exon
so has part: feature:667475-667583:-1:exon
so has part: feature:662369-662448:-1:exon
so has part: feature:661413-661575:-1:exon
so has part: feature:660370-660463:-1:exon
so has part: feature:657595-657672:-1:exon
so has part: feature:655321-655567:-1:exon

XP_032324223.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:686991-687052:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:685548-685651:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:684699-684838:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:682399-682480:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:681768-681908:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:681169-681340:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:680528-680697:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:679617-679750:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:672776-672929:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:671390-671472:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:670525-670677:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:667475-667583:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:662369-662448:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:661413-661575:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:660370-660463:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:657595-657672:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:655321-655567:-1:exon

TRNAT-GGU
type: Gene
subclass of: SO_0000704
RO_0002162: 419612
gene: TRNAT-GGU
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
so part of: sequence
location: 700598..700669
location: region:700598-700669:1
so has part: feature:700598-700669:1:exon
subclass of: SO_0000663

116660124
type: Gene
SIO_000068: ncbigene

position:700598:1
position: 700598
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:700669:1
position: 700669
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:700598-700669:1:exon

TRNAT-GGU
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 419612
gene: TRNAT-GGU
product: tRNA-Thr
inference: COORDINATES: profile:tRNAscan-SE:1.23
note: transfer RNA threonine (anticodon GGU); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:700630..700632,aa:Thr,seq:ggt)
SIO_010081: TRNAT-GGU
subclass of: SO_0000673
so part of: TRNAT-GGU
location: 700598..700669
location: region:700598-700669:1
so has part: feature:700598-700669:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:700598-700669:1:exon

LOC116660075
type: Gene
subclass of: SO_0000704
RO_0002162: 419612
gene: LOC116660075
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(715240..718395)
location: region:715240-718395:-1
so has part: feature:715240-718395:-1:exon
subclass of: SO_0000011

116660075
type: Gene
SIO_000068: ncbigene

position:715240:-1
position: 715240
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:718395:-1
position: 718395
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:715240-718395:-1:exon

LOC116660075
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 419612
nc RNA class: lncRNA
gene: LOC116660075
product: uncharacterized LOC116660075
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XR_004315442.1
SIO_010081: LOC116660075
subclass of: SO_0000673
so part of: LOC116660075
location: complement(join(715240..715462,716090..716244,718215..718395))
location: region:715240-718395:-1
so has part: feature:718215-718395:-1:exon
so has part: feature:716090-716244:-1:exon
so has part: feature:715240-715462:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:718215-718395:-1:exon

position:718215:-1
position: 718215
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:716090-716244:-1:exon

position:716090:-1
position: 716090
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:716244:-1
position: 716244
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:715240-715462:-1:exon

position:715462:-1
position: 715462
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

CSGALNACT1
type: Gene
subclass of: SO_0000704
RO_0002162: 419612
gene: CSGALNACT1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 718545..975632
location: region:718545-975632:1
so has part: feature:718545-975632:1:exon
subclass of: SO_0000010

102513810
type: Gene
SIO_000068: ncbigene

position:718545:1
position: 718545
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:975632:1
position: 975632
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:718545-975632:1:exon

CSGALNACT1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 419612
gene: CSGALNACT1
product: chondroitin sulfate N-acetylgalactosaminyltransferase 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 12 samples with support for all annotated introns
transcript id: XM_032468711.1
SIO_010081: CSGALNACT1
subclass of: SO_0000673
so part of: CSGALNACT1
location: join(718545..718607,837897..837985,907321..908213,938813..939029,952762..952863,965030..965208,966105..966199,972877..972958,974174..975632)
location: region:718545-975632:1
so has part: feature:718545-718607:1:exon
so has part: feature:837897-837985:1:exon
so has part: feature:907321-908213:1:exon
so has part: feature:938813-939029:1:exon
so has part: feature:952762-952863:1:exon
so has part: feature:965030-965208:1:exon
so has part: feature:966105-966199:1:exon
so has part: feature:972877-972958:1:exon
so has part: feature:974174-975632:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:718545-718607:1:exon

position:718607:1
position: 718607
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:837897-837985:1:exon

position:837897:1
position: 837897
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:837985:1
position: 837985
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:907321-908213:1:exon

position:907321:1
position: 907321
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:908213:1
position: 908213
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:938813-939029:1:exon

position:938813:1
position: 938813
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:939029:1
position: 939029
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:952762-952863:1:exon

position:952762:1
position: 952762
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:952863:1
position: 952863
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:965030-965208:1:exon

position:965030:1
position: 965030
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:965208:1
position: 965208
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:966105-966199:1:exon

position:966105:1
position: 966105
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:966199:1
position: 966199
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:972877-972958:1:exon

position:972877:1
position: 972877
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:972958:1
position: 972958
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:974174-975632:1:exon

position:974174:1
position: 974174
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

CSGALNACT1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 419612
gene: CSGALNACT1
product: chondroitin sulfate N-acetylgalactosaminyltransferase 1, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 16 samples with support for all annotated introns
transcript id: XM_032468712.1
SIO_010081: CSGALNACT1
subclass of: SO_0000673
so part of: CSGALNACT1
location: join(836715..836918,837897..837985,907321..908213,938813..939029,952762..952863,965030..965208,966105..966199,972877..972958,974174..975632)
location: region:836715-975632:1
so has part: feature:836715-836918:1:exon
so has part: feature:837897-837985:1:exon
so has part: feature:907321-908213:1:exon
so has part: feature:938813-939029:1:exon
so has part: feature:952762-952863:1:exon
so has part: feature:965030-965208:1:exon
so has part: feature:966105-966199:1:exon
so has part: feature:972877-972958:1:exon
so has part: feature:974174-975632:1:exon

position:836715:1
position: 836715
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:836715-836918:1:exon

position:836918:1
position: 836918
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:837897-837985:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:907321-908213:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:938813-939029:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:952762-952863:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:965030-965208:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:966105-966199:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:972877-972958:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:974174-975632:1:exon

CSGALNACT1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 419612
gene: CSGALNACT1
product: chondroitin sulfate N-acetylgalactosaminyltransferase 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 15 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 34 samples with support for all annotated introns
transcript id: XM_032468710.1
SIO_010081: CSGALNACT1
subclass of: SO_0000673
so part of: CSGALNACT1
location: join(837313..837584,837897..837985,907321..908213,938813..939029,952762..952863,965030..965208,966105..966199,972877..972958,974174..975632)
location: region:837313-975632:1
so has part: feature:837313-837584:1:exon
so has part: feature:837897-837985:1:exon
so has part: feature:907321-908213:1:exon
so has part: feature:938813-939029:1:exon
so has part: feature:952762-952863:1:exon
so has part: feature:965030-965208:1:exon
so has part: feature:966105-966199:1:exon
so has part: feature:972877-972958:1:exon
so has part: feature:974174-975632:1:exon

position:837313:1
position: 837313
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:837313-837584:1:exon

position:837584:1
position: 837584
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:837897-837985:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:907321-908213:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:938813-939029:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:952762-952863:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:965030-965208:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:966105-966199:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:972877-972958:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:974174-975632:1:exon

CSGALNACT1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 419612
gene: CSGALNACT1
product: chondroitin sulfate N-acetylgalactosaminyltransferase 1, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_032468714.1
SIO_010081: CSGALNACT1
subclass of: SO_0000673
so part of: CSGALNACT1
location: join(864194..864215,907321..908213,938813..939029,952762..952863,965030..965208,966105..966199,972877..972958,974174..975632)
location: region:864194-975632:1
so has part: feature:864194-864215:1:exon
so has part: feature:907321-908213:1:exon
so has part: feature:938813-939029:1:exon
so has part: feature:952762-952863:1:exon
so has part: feature:965030-965208:1:exon
so has part: feature:966105-966199:1:exon
so has part: feature:972877-972958:1:exon
so has part: feature:974174-975632:1:exon

position:864194:1
position: 864194
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:864194-864215:1:exon

position:864215:1
position: 864215
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:907321-908213:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:938813-939029:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:952762-952863:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:965030-965208:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:966105-966199:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:972877-972958:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:974174-975632:1:exon

CSGALNACT1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 419612
gene: CSGALNACT1
product: chondroitin sulfate N-acetylgalactosaminyltransferase 1, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns
transcript id: XM_032468713.1
SIO_010081: CSGALNACT1
subclass of: SO_0000673
so part of: CSGALNACT1
location: join(876234..876255,907321..908213,938813..939029,952762..952863,965030..965208,966105..966199,972877..972958,974174..975632)
location: region:876234-975632:1
so has part: feature:876234-876255:1:exon
so has part: feature:907321-908213:1:exon
so has part: feature:938813-939029:1:exon
so has part: feature:952762-952863:1:exon
so has part: feature:965030-965208:1:exon
so has part: feature:966105-966199:1:exon
so has part: feature:972877-972958:1:exon
so has part: feature:974174-975632:1:exon

position:876234:1
position: 876234
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:876234-876255:1:exon

position:876255:1
position: 876255
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:907321-908213:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:938813-939029:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:952762-952863:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:965030-965208:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:966105-966199:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:972877-972958:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:974174-975632:1:exon

CSGALNACT1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 419612
gene: CSGALNACT1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: chondroitin sulfate N-acetylgalactosaminyltransferase 1
translation: MARRGLLAWVSRVVVLLVLLCCAVSVLYMLACTPKGDDEQRGLPRAGGPTGKEAALQGWEEQQQQRDYIGSLKRQIAQLQEELQERGEQLRVAQRLAGAPGRAQADLLAFLRSQVDRAEVHAGLKQATEYAAVPFDSFTLQKVYQLETGLTRHPEEKPVRKDKRDELAEAIESAVGALNSPSEGSPYQRPYTAADFIEGIYRTEKDKGTLYELTFRGDHKHEFRRLVLFRPFGPIMQVKTEELNMASTLVNVIVPLARRVDKFRQFMHNFREMCIQQDGRIHLTVVYFGKEEMNEVKGILENTSKAANFRNFTFIQLNGEFSRGKGLDVGARFWKGSNVLLFFCDVDIYFTSEFLNTCRLNAQPGKKVFYPVLFSQYNPEIIYGHHDAVPPLEQQLVIKKETGFWRDFGFGMTCQYRSDFINIGGFDLDIRGWGGEDVHLYRKYLHSSLLVVRAPVRGLFHLWHEKRCVHELTPEQYRMCMQSKAMNEASHGQLGMLVFRQEIEAHLRKQKQRTSSKKT
SIO_010081: CSGALNACT1
subclass of: SO_0000673
so part of: CSGALNACT1
location: join(907619..908213,938813..939029,952762..952863,965030..965208,966105..966199,972877..972958,974174..974463)
location: region:907619-974463:1
so has part: feature:907619-908213:1:exon
so has part: feature:938813-939029:1:exon
so has part: feature:952762-952863:1:exon
so has part: feature:965030-965208:1:exon
so has part: feature:966105-966199:1:exon
so has part: feature:972877-972958:1:exon
so has part: feature:974174-974463:1:exon

XP_032324601.1
type: Protein
SIO_000068: ncbiprotein

position:907619:1
position: 907619
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:974463:1
position: 974463
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:907619-908213:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:938813-939029:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:952762-952863:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:965030-965208:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:966105-966199:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:972877-972958:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:974174-974463:1:exon

CSGALNACT1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 419612
gene: CSGALNACT1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: chondroitin sulfate N-acetylgalactosaminyltransferase 1
translation: MARRGLLAWVSRVVVLLVLLCCAVSVLYMLACTPKGDDEQRGLPRAGGPTGKEAALQGWEEQQQQRDYIGSLKRQIAQLQEELQERGEQLRVAQRLAGAPGRAQADLLAFLRSQVDRAEVHAGLKQATEYAAVPFDSFTLQKVYQLETGLTRHPEEKPVRKDKRDELAEAIESAVGALNSPSEGSPYQRPYTAADFIEGIYRTEKDKGTLYELTFRGDHKHEFRRLVLFRPFGPIMQVKTEELNMASTLVNVIVPLARRVDKFRQFMHNFREMCIQQDGRIHLTVVYFGKEEMNEVKGILENTSKAANFRNFTFIQLNGEFSRGKGLDVGARFWKGSNVLLFFCDVDIYFTSEFLNTCRLNAQPGKKVFYPVLFSQYNPEIIYGHHDAVPPLEQQLVIKKETGFWRDFGFGMTCQYRSDFINIGGFDLDIRGWGGEDVHLYRKYLHSSLLVVRAPVRGLFHLWHEKRCVHELTPEQYRMCMQSKAMNEASHGQLGMLVFRQEIEAHLRKQKQRTSSKKT
SIO_010081: CSGALNACT1
subclass of: SO_0000673
so part of: CSGALNACT1
location: join(907619..908213,938813..939029,952762..952863,965030..965208,966105..966199,972877..972958,974174..974463)
location: region:907619-974463:1
so has part: feature:907619-908213:1:exon
so has part: feature:938813-939029:1:exon
so has part: feature:952762-952863:1:exon
so has part: feature:965030-965208:1:exon
so has part: feature:966105-966199:1:exon
so has part: feature:972877-972958:1:exon
so has part: feature:974174-974463:1:exon

XP_032324602.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:907619-908213:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:938813-939029:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:952762-952863:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:965030-965208:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:966105-966199:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:972877-972958:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:974174-974463:1:exon

CSGALNACT1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 419612
gene: CSGALNACT1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: chondroitin sulfate N-acetylgalactosaminyltransferase 1
translation: MARRGLLAWVSRVVVLLVLLCCAVSVLYMLACTPKGDDEQRGLPRAGGPTGKEAALQGWEEQQQQRDYIGSLKRQIAQLQEELQERGEQLRVAQRLAGAPGRAQADLLAFLRSQVDRAEVHAGLKQATEYAAVPFDSFTLQKVYQLETGLTRHPEEKPVRKDKRDELAEAIESAVGALNSPSEGSPYQRPYTAADFIEGIYRTEKDKGTLYELTFRGDHKHEFRRLVLFRPFGPIMQVKTEELNMASTLVNVIVPLARRVDKFRQFMHNFREMCIQQDGRIHLTVVYFGKEEMNEVKGILENTSKAANFRNFTFIQLNGEFSRGKGLDVGARFWKGSNVLLFFCDVDIYFTSEFLNTCRLNAQPGKKVFYPVLFSQYNPEIIYGHHDAVPPLEQQLVIKKETGFWRDFGFGMTCQYRSDFINIGGFDLDIRGWGGEDVHLYRKYLHSSLLVVRAPVRGLFHLWHEKRCVHELTPEQYRMCMQSKAMNEASHGQLGMLVFRQEIEAHLRKQKQRTSSKKT
SIO_010081: CSGALNACT1
subclass of: SO_0000673
so part of: CSGALNACT1
location: join(907619..908213,938813..939029,952762..952863,965030..965208,966105..966199,972877..972958,974174..974463)
location: region:907619-974463:1
so has part: feature:907619-908213:1:exon
so has part: feature:938813-939029:1:exon
so has part: feature:952762-952863:1:exon
so has part: feature:965030-965208:1:exon
so has part: feature:966105-966199:1:exon
so has part: feature:972877-972958:1:exon
so has part: feature:974174-974463:1:exon

XP_032324603.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:907619-908213:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:938813-939029:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:952762-952863:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:965030-965208:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:966105-966199:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:972877-972958:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:974174-974463:1:exon

CSGALNACT1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 419612
gene: CSGALNACT1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: chondroitin sulfate N-acetylgalactosaminyltransferase 1
translation: MARRGLLAWVSRVVVLLVLLCCAVSVLYMLACTPKGDDEQRGLPRAGGPTGKEAALQGWEEQQQQRDYIGSLKRQIAQLQEELQERGEQLRVAQRLAGAPGRAQADLLAFLRSQVDRAEVHAGLKQATEYAAVPFDSFTLQKVYQLETGLTRHPEEKPVRKDKRDELAEAIESAVGALNSPSEGSPYQRPYTAADFIEGIYRTEKDKGTLYELTFRGDHKHEFRRLVLFRPFGPIMQVKTEELNMASTLVNVIVPLARRVDKFRQFMHNFREMCIQQDGRIHLTVVYFGKEEMNEVKGILENTSKAANFRNFTFIQLNGEFSRGKGLDVGARFWKGSNVLLFFCDVDIYFTSEFLNTCRLNAQPGKKVFYPVLFSQYNPEIIYGHHDAVPPLEQQLVIKKETGFWRDFGFGMTCQYRSDFINIGGFDLDIRGWGGEDVHLYRKYLHSSLLVVRAPVRGLFHLWHEKRCVHELTPEQYRMCMQSKAMNEASHGQLGMLVFRQEIEAHLRKQKQRTSSKKT
SIO_010081: CSGALNACT1
subclass of: SO_0000673
so part of: CSGALNACT1
location: join(907619..908213,938813..939029,952762..952863,965030..965208,966105..966199,972877..972958,974174..974463)
location: region:907619-974463:1
so has part: feature:907619-908213:1:exon
so has part: feature:938813-939029:1:exon
so has part: feature:952762-952863:1:exon
so has part: feature:965030-965208:1:exon
so has part: feature:966105-966199:1:exon
so has part: feature:972877-972958:1:exon
so has part: feature:974174-974463:1:exon

XP_032324604.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:907619-908213:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:938813-939029:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:952762-952863:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:965030-965208:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:966105-966199:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:972877-972958:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:974174-974463:1:exon

CSGALNACT1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 419612
gene: CSGALNACT1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: chondroitin sulfate N-acetylgalactosaminyltransferase 1
translation: MARRGLLAWVSRVVVLLVLLCCAVSVLYMLACTPKGDDEQRGLPRAGGPTGKEAALQGWEEQQQQRDYIGSLKRQIAQLQEELQERGEQLRVAQRLAGAPGRAQADLLAFLRSQVDRAEVHAGLKQATEYAAVPFDSFTLQKVYQLETGLTRHPEEKPVRKDKRDELAEAIESAVGALNSPSEGSPYQRPYTAADFIEGIYRTEKDKGTLYELTFRGDHKHEFRRLVLFRPFGPIMQVKTEELNMASTLVNVIVPLARRVDKFRQFMHNFREMCIQQDGRIHLTVVYFGKEEMNEVKGILENTSKAANFRNFTFIQLNGEFSRGKGLDVGARFWKGSNVLLFFCDVDIYFTSEFLNTCRLNAQPGKKVFYPVLFSQYNPEIIYGHHDAVPPLEQQLVIKKETGFWRDFGFGMTCQYRSDFINIGGFDLDIRGWGGEDVHLYRKYLHSSLLVVRAPVRGLFHLWHEKRCVHELTPEQYRMCMQSKAMNEASHGQLGMLVFRQEIEAHLRKQKQRTSSKKT
SIO_010081: CSGALNACT1
subclass of: SO_0000673
so part of: CSGALNACT1
location: join(907619..908213,938813..939029,952762..952863,965030..965208,966105..966199,972877..972958,974174..974463)
location: region:907619-974463:1
so has part: feature:907619-908213:1:exon
so has part: feature:938813-939029:1:exon
so has part: feature:952762-952863:1:exon
so has part: feature:965030-965208:1:exon
so has part: feature:966105-966199:1:exon
so has part: feature:972877-972958:1:exon
so has part: feature:974174-974463:1:exon

XP_032324605.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:907619-908213:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:938813-939029:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:952762-952863:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:965030-965208:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:966105-966199:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:972877-972958:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:974174-974463:1:exon

SH2D4A
type: Gene
subclass of: SO_0000704
RO_0002162: 419612
gene: SH2D4A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(984066..1033671)
location: region:984066-1033671:-1
so has part: feature:984066-1033671:-1:exon
subclass of: SO_0000010

102510541
type: Gene
SIO_000068: ncbigene

position:984066:-1
position: 984066
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1033671:-1
position: 1033671
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:984066-1033671:-1:exon

SH2D4A
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 419612
gene: SH2D4A
product: SH2 domain containing 4A
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 Proteins, and 91% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_032468796.1
SIO_010081: SH2D4A
subclass of: SO_0000673
so part of: SH2D4A
location: complement(join(984066..985263,985716..985936,993377..993507,995916..996117,996683..996788,999531..999617,1019397..1019568,1020671..1020831,1028906..1029283,1033533..1033671))
location: region:984066-1033671:-1
so has part: feature:1033533-1033671:-1:exon
so has part: feature:1028906-1029283:-1:exon
so has part: feature:1020671-1020831:-1:exon
so has part: feature:1019397-1019568:-1:exon
so has part: feature:999531-999617:-1:exon
so has part: feature:996683-996788:-1:exon
so has part: feature:995916-996117:-1:exon
so has part: feature:993377-993507:-1:exon
so has part: feature:985716-985936:-1:exon
so has part: feature:984066-985263:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1033533-1033671:-1:exon

position:1033533:-1
position: 1033533
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1028906-1029283:-1:exon

position:1028906:-1
position: 1028906
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1029283:-1
position: 1029283
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1020671-1020831:-1:exon

position:1020671:-1
position: 1020671
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1020831:-1
position: 1020831
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1019397-1019568:-1:exon

position:1019397:-1
position: 1019397
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1019568:-1
position: 1019568
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:999531-999617:-1:exon

position:999531:-1
position: 999531
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:999617:-1
position: 999617
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:996683-996788:-1:exon

position:996683:-1
position: 996683
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:996788:-1
position: 996788
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:995916-996117:-1:exon

position:995916:-1
position: 995916
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:996117:-1
position: 996117
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:993377-993507:-1:exon

position:993377:-1
position: 993377
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:993507:-1
position: 993507
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:985716-985936:-1:exon

position:985716:-1
position: 985716
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:985936:-1
position: 985936
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:984066-985263:-1:exon

position:985263:-1
position: 985263
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

SH2D4A
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 419612
gene: SH2D4A
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: SH2 domain-containing protein 4A
translation: MLKQILAEMYIDPDLLAELSEEQKQILFFKMREEQIRRWKEREAAMENKECLPVKSRPKKENGKSVHWKLGADKEVWVWVMGEHHLDKPYDVLCDEILAERARLKAEQEAEELRKTQSGGFTSSLKAKSHSSDLPVSGDRETQNVCTKAAEEGGPGPGGGPTPPVKEEKTPSPSGSFRNIQQMLADSINRMKGYRFRQVKSPVKKTQGEEIKQIDEEKTKQIYKNWKEDSEWQASLRKSKAADERRRSLARQAREDYQRLSQRGRKSGGPQNSRSGPPQPRRPPLPPKPQFLSSTGHPDKPLRHQGVTRTASSSLQEDIVHWFREEQVPLRAGYLGASDSIAPWFHGILTVKRANELLSACVPGSFLVRVSDRTRGYALSYLSDSGCKHFLIDASAGSYSFLGVDQLRHASLADLVEYHKDEPITSLGKELLLHPCGQQEGPPDYLELFE
SIO_010081: SH2D4A
subclass of: SO_0000673
so part of: SH2D4A
location: complement(join(985171..985263,985716..985936,993377..993507,995916..996117,996683..996788,999531..999617,1019397..1019568,1020671..1020831,1028906..1029086))
location: region:985171-1029086:-1
so has part: feature:1028906-1029086:-1:exon
so has part: feature:1020671-1020831:-1:exon
so has part: feature:1019397-1019568:-1:exon
so has part: feature:999531-999617:-1:exon
so has part: feature:996683-996788:-1:exon
so has part: feature:995916-996117:-1:exon
so has part: feature:993377-993507:-1:exon
so has part: feature:985716-985936:-1:exon
so has part: feature:985171-985263:-1:exon

XP_032324687.1
type: Protein
SIO_000068: ncbiprotein

position:985171:-1
position: 985171
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1029086:-1
position: 1029086
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1028906-1029086:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1020671-1020831:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1019397-1019568:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:999531-999617:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:996683-996788:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:995916-996117:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:993377-993507:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:985716-985936:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:985171-985263:-1:exon

LOC116660098
type: Gene
subclass of: SO_0000704
RO_0002162: 419612
gene: LOC116660098
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1035732..1050928)
location: region:1035732-1050928:-1
so has part: feature:1035732-1050928:-1:exon
subclass of: SO_0000011

116660098
type: Gene
SIO_000068: ncbigene

position:1035732:-1
position: 1035732
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1050928:-1
position: 1050928
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1035732-1050928:-1:exon

LOC116660098
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 419612
nc RNA class: lncRNA
gene: LOC116660098
product: uncharacterized LOC116660098
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XR_004315472.1
SIO_010081: LOC116660098
subclass of: SO_0000673
so part of: LOC116660098
location: complement(join(1035732..1036364,1037872..1037976,1050601..1050928))
location: region:1035732-1050928:-1
so has part: feature:1050601-1050928:-1:exon
so has part: feature:1037872-1037976:-1:exon
so has part: feature:1035732-1036364:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1050601-1050928:-1:exon

position:1050601:-1
position: 1050601
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1037872-1037976:-1:exon

position:1037872:-1
position: 1037872
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1037976:-1
position: 1037976
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1035732-1036364:-1:exon

position:1036364:-1
position: 1036364
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC116660097
type: Gene
subclass of: SO_0000704
RO_0002162: 419612
gene: LOC116660097
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1037986..1075625
location: region:1037986-1075625:1
so has part: feature:1037986-1075625:1:exon
subclass of: SO_0000010

116660097
type: Gene
SIO_000068: ncbigene

position:1037986:1
position: 1037986
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1075625:1
position: 1075625
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1037986-1075625:1:exon

LOC116660097
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 419612
gene: LOC116660097
product: uncharacterized LOC116660097
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_032468794.1
SIO_010081: LOC116660097
subclass of: SO_0000673
so part of: LOC116660097
location: join(1037986..1038476,1062150..1063220,1063417..1063584,1074607..1075625)
location: region:1037986-1075625:1
so has part: feature:1037986-1038476:1:exon
so has part: feature:1062150-1063220:1:exon
so has part: feature:1063417-1063584:1:exon
so has part: feature:1074607-1075625:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1037986-1038476:1:exon

position:1038476:1
position: 1038476
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1062150-1063220:1:exon

position:1062150:1
position: 1062150
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1063220:1
position: 1063220
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1063417-1063584:1:exon

position:1063417:1
position: 1063417
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1063584:1
position: 1063584
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1074607-1075625:1:exon

position:1074607:1
position: 1074607
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC116660097
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 419612
gene: LOC116660097
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC116660097
translation: MQGEYGSHPASAHFSESVSPTVARTECKDGLVPRTQGPDFSCDERLEISEFIPLGKKKKTNKQQTTPGRCVGTTVEMRAVLSDPLGHSDRSRMSVVLSPGRRRDQKNDVLRRHEPEPRGQAAPTGTSPDSPTPARVPAFPPPNPRTLPSTSLMAESKARAQLPEASVYPRETRIRKCGECNEVRSMFETWQDANEGRKLLESRGMRMSSQQRPWKGTEKKFQLVDDMTKMSHLVTVCGG
SIO_010081: LOC116660097
subclass of: SO_0000673
so part of: LOC116660097
location: join(1062918..1063220,1063417..1063584,1074607..1074855)
location: region:1062918-1074855:1
so has part: feature:1062918-1063220:1:exon
so has part: feature:1063417-1063584:1:exon
so has part: feature:1074607-1074855:1:exon

XP_032324685.1
type: Protein
SIO_000068: ncbiprotein

position:1062918:1
position: 1062918
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1074855:1
position: 1074855
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1062918-1063220:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1063417-1063584:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1074607-1074855:1:exon

PSD3
type: Gene
subclass of: SO_0000704
RO_0002162: 419612
gene: PSD3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1083283..1610220
location: region:1083283-1610220:1
so has part: feature:1083283-1610220:1:exon
subclass of: SO_0000010

102514656
type: Gene
SIO_000068: ncbigene

position:1083283:1
position: 1083283
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1610220:1
position: 1610220
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1083283-1610220:1:exon

PSD3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 419612
gene: PSD3
product: pleckstrin and Sec7 domain containing 3
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_032468468.1
SIO_010081: PSD3
subclass of: SO_0000673
so part of: PSD3
location: join(1083283..1083624,1164718..1165579,1284505..1284613,1324962..1326066,1328613..1329008,1378143..1378346,1378447..1378527,1380245..1380357,1382881..1382939,1404491..1404580,1492585..1492628,1515330..1515523,1538913..1538983,1570780..1570937,1573441..1573585,1584189..1584332,1602584..1610220)
location: region:1083283-1610220:1
so has part: feature:1083283-1083624:1:exon
so has part: feature:1164718-1165579:1:exon
so has part: feature:1284505-1284613:1:exon
so has part: feature:1324962-1326066:1:exon
so has part: feature:1328613-1329008:1:exon
so has part: feature:1378143-1378346:1:exon
so has part: feature:1378447-1378527:1:exon
so has part: feature:1380245-1380357:1:exon
so has part: feature:1382881-1382939:1:exon
so has part: feature:1404491-1404580:1:exon
so has part: feature:1492585-1492628:1:exon
so has part: feature:1515330-1515523:1:exon
so has part: feature:1538913-1538983:1:exon
so has part: feature:1570780-1570937:1:exon
so has part: feature:1573441-1573585:1:exon
so has part: feature:1584189-1584332:1:exon
so has part: feature:1602584-1610220:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1083283-1083624:1:exon

position:1083624:1
position: 1083624
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1164718-1165579:1:exon

position:1164718:1
position: 1164718
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1165579:1
position: 1165579
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1284505-1284613:1:exon

position:1284505:1
position: 1284505
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1284613:1
position: 1284613
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1324962-1326066:1:exon

position:1324962:1
position: 1324962
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1326066:1
position: 1326066
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1328613-1329008:1:exon

position:1328613:1
position: 1328613
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1329008:1
position: 1329008
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1378143-1378346:1:exon

position:1378143:1
position: 1378143
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1378346:1
position: 1378346
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1378447-1378527:1:exon

position:1378447:1
position: 1378447
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1378527:1
position: 1378527
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1380245-1380357:1:exon

position:1380245:1
position: 1380245
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1380357:1
position: 1380357
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1382881-1382939:1:exon

position:1382881:1
position: 1382881
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1382939:1
position: 1382939
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1404491-1404580:1:exon

position:1404491:1
position: 1404491
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1404580:1
position: 1404580
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1492585-1492628:1:exon

position:1492585:1
position: 1492585
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1492628:1
position: 1492628
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1515330-1515523:1:exon

position:1515330:1
position: 1515330
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1515523:1
position: 1515523
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1538913-1538983:1:exon

position:1538913:1
position: 1538913
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1538983:1
position: 1538983
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:1570780-1570937:1:exon

position:1570780:1
position: 1570780
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1570937:1
position: 1570937
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:1573441-1573585:1:exon

position:1573441:1
position: 1573441
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1573585:1
position: 1573585
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:1584189-1584332:1:exon

position:1584189:1
position: 1584189
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1584332:1
position: 1584332
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:1602584-1610220:1:exon

position:1602584:1
position: 1602584
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

PSD3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 419612
gene: PSD3
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: PH and SEC7 domain-containing protein 3
translation: MADESGQRQMKTSFFFVQLRAPPARAFPAPSPARTAAAGGLEEGRFVPSPGKGFSAGQAPGVPRGSAAPPLQRQGRGTEAPAARSCSAPKKEEEGEERTRDLDAKRGRPCRSLGRRRALAPASRNRGRRRPLPCRPPSPAPGMGDGGGSPSAGWRARPVITAPRDLWGTDPQSRDAWGCSIPQARADDGSENAVPRGDAGPRATCPVRPRSAEGTGTPARARRARLCRYCAPLQASRSCPAPPAALPLKAETFVWVNSASAHSQSVAKAKYEFLFGRSEEKTPDTSDHGGSTLLPPNVTNEFPEYGTMEEGGEGLRASLELDAESLACRPQGPQGFRLLAGQHSGLASGTGGPPDVGEAPSQSHLKEQSLQPIDSLISALKATEARIASGTLKAAKVLDRDVAPGFSVQQVEKEPDTASHKTQRANELFPAGREKPPDIPLSAEVMTEENFYLSIQKDLTALLTGETQAELSRTANNGRKGVLHVQEPAHPASSVRSPATHSSLGSAGLLRERRSDQGGGHPGRGDQGSSAGRPGQVKHVEFQAVEILWTGGEKRDTRQPVDFETLLERTTPPEGKEFSKAPGHPVSCAGLCNSAGLTGNVWDEAQGAPAERLAAGSGPLSPVPLLESGEDEVFLRDNKEHLEKKPGLERDKQRALEQEEPLRGGEDDVLGPGCAEDPTDVYSSQFEAVLDNTSLYYSAGSSETLYSEPDSYFSFEMPLTPMIQQRIKEGGQFLERTPAGGQQDILSVSADGGVVMGCSGGITNGLSGSRSSVYSRGTPEAAFWGSSHSHAGVKTALLDARSEMGSTDILEKETSGSLSNGTSGNVDAARRLARRLYQLDRFKRSDVAKHLGKNNEFSKLVAEEYLKFFDFTGMTLDQSLRYFFKAFSLVGETQERERVLIHFSNRYFYCNPDTIASQDGVHCLTCAMMLLNTDLHGHNIGKKMTCQEFIANLQGVDEGGDFSKDLLKALYNSIKNEKLEWAVDDEEKKKSPSEGTDEKANGTHPKTLSRIGSTTNPFLDIPHDPNAAVYKSGFLARKIHADMDGKKTPRGKRGWKTFYAVLKGTVLYLQKDEYKPEKALSEEDLKNAVSVHHALASQATDYEKKPNVLKLKTADWRVLLFQAQSPEEMQGWINKINCVAAVFSAPPFPAAIGSQKKFSRPLLPATTTKLSQEEQLKSHESKLKQIATELAEHRSYPPDKKVKAKEVDEYKLKDHYLEFEKTRYETYVRVLKEGGVELLNSSGGGPAGLKKSHSSPSLNPDSSPVTAKVKRNVSERKDHRPETPGIKQKVT
SIO_010081: PSD3
subclass of: SO_0000673
so part of: PSD3
location: join(1164833..1165579,1284505..1284613,1324962..1326066,1328613..1329008,1378143..1378346,1378447..1378527,1380245..1380357,1382881..1382939,1404491..1404580,1492585..1492628,1515330..1515523,1538913..1538983,1570780..1570937,1573441..1573585,1584189..1584332,1602584..1602800)
location: region:1164833-1602800:1
so has part: feature:1164833-1165579:1:exon
so has part: feature:1284505-1284613:1:exon
so has part: feature:1324962-1326066:1:exon
so has part: feature:1328613-1329008:1:exon
so has part: feature:1378143-1378346:1:exon
so has part: feature:1378447-1378527:1:exon
so has part: feature:1380245-1380357:1:exon
so has part: feature:1382881-1382939:1:exon
so has part: feature:1404491-1404580:1:exon
so has part: feature:1492585-1492628:1:exon
so has part: feature:1515330-1515523:1:exon
so has part: feature:1538913-1538983:1:exon
so has part: feature:1570780-1570937:1:exon
so has part: feature:1573441-1573585:1:exon
so has part: feature:1584189-1584332:1:exon
so has part: feature:1602584-1602800:1:exon

XP_032324359.1
type: Protein
SIO_000068: ncbiprotein

position:1164833:1
position: 1164833
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1602800:1
position: 1602800
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1164833-1165579:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1284505-1284613:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1324962-1326066:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1328613-1329008:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1378143-1378346:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1378447-1378527:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1380245-1380357:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1382881-1382939:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1404491-1404580:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1492585-1492628:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1515330-1515523:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1538913-1538983:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1570780-1570937:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1573441-1573585:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1584189-1584332:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1602584-1602800:1:exon

LOC116660003
type: Gene
subclass of: SO_0000704
RO_0002162: 419612
gene: LOC116660003
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1180596..1198968
location: region:1180596-1198968:1
so has part: feature:1180596-1198968:1:exon
subclass of: SO_0000011

116660003
type: Gene
SIO_000068: ncbigene

position:1180596:1
position: 1180596
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1198968:1
position: 1198968
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1180596-1198968:1:exon

LOC116660003
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 419612
nc RNA class: lncRNA
gene: LOC116660003
product: uncharacterized LOC116660003
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XR_004315359.1
SIO_010081: LOC116660003
subclass of: SO_0000673
so part of: LOC116660003
location: join(1180596..1182925,1186515..1186522,1198959..1198968)
location: region:1180596-1198968:1
so has part: feature:1180596-1182925:1:exon
so has part: feature:1186515-1186522:1:exon
so has part: feature:1198959-1198968:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1180596-1182925:1:exon

position:1182925:1
position: 1182925
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1186515-1186522:1:exon

position:1186515:1
position: 1186515
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1186522:1
position: 1186522
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1198959-1198968:1:exon

position:1198959:1
position: 1198959
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC116660002
type: Gene
subclass of: SO_0000704
RO_0002162: 419612
gene: LOC116660002
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1202322..1220216
location: region:1202322-1220216:1
so has part: feature:1202322-1220216:1:exon
subclass of: SO_0000011

116660002
type: Gene
SIO_000068: ncbigene

position:1202322:1
position: 1202322
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1220216:1
position: 1220216
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1202322-1220216:1:exon

LOC116660002
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 419612
nc RNA class: lncRNA
gene: LOC116660002
product: uncharacterized LOC116660002
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XR_004315358.1
SIO_010081: LOC116660002
subclass of: SO_0000673
so part of: LOC116660002
location: join(1202322..1202331,1216177..1216181,1219691..1220216)
location: region:1202322-1220216:1
so has part: feature:1202322-1202331:1:exon
so has part: feature:1216177-1216181:1:exon
so has part: feature:1219691-1220216:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1202322-1202331:1:exon

position:1202331:1
position: 1202331
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1216177-1216181:1:exon

position:1216177:1
position: 1216177
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1216181:1
position: 1216181
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1219691-1220216:1:exon

position:1219691:1
position: 1219691
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC116660118
type: Gene
subclass of: SO_0000704
RO_0002162: 419612
gene: LOC116660118
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: complement(1384125..1384255)
location: region:1384125-1384255:-1
so has part: feature:1384125-1384255:-1:exon
subclass of: SO_0000578

116660118
type: Gene
SIO_000068: ncbigene

position:1384125:-1
position: 1384125
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1384255:-1
position: 1384255
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1384125-1384255:-1:exon

LOC116660118
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 419612
nc RNA class: snoRNA
gene: LOC116660118
product: small nucleolar RNA SNORA17
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00560
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_004315503.1
SIO_010081: LOC116660118
subclass of: SO_0000673
so part of: LOC116660118
location: complement(1384125..1384255)
location: region:1384125-1384255:-1
so has part: feature:1384125-1384255:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1384125-1384255:-1:exon

TRNAA-GGC
type: Gene
subclass of: SO_0000704
RO_0002162: 419612
gene: TRNAA-GGC
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
so part of: sequence
location: complement(1658737..1658808)
location: region:1658737-1658808:-1
so has part: feature:1658737-1658808:-1:exon
subclass of: SO_0000663

116660130
type: Gene
SIO_000068: ncbigene

position:1658737:-1
position: 1658737
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1658808:-1
position: 1658808
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1658737-1658808:-1:exon

TRNAA-GGC
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 419612
gene: TRNAA-GGC
product: tRNA-Ala
inference: COORDINATES: profile:tRNAscan-SE:1.23
note: transfer RNA alanine (anticodon GGC); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:complement(1658774..1658776),aa:Ala, seq:ggc)
SIO_010081: TRNAA-GGC
subclass of: SO_0000673
so part of: TRNAA-GGC
location: complement(1658737..1658808)
location: region:1658737-1658808:-1
so has part: feature:1658737-1658808:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1658737-1658808:-1:exon

LOC102510309
type: Gene
subclass of: SO_0000704
RO_0002162: 419612
gene: LOC102510309
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1715999..1725240)
location: region:1715999-1725240:-1
so has part: feature:1715999-1725240:-1:exon
subclass of: SO_0000010

102510309
type: Gene
SIO_000068: ncbigene

position:1715999:-1
position: 1715999
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1725240:-1
position: 1725240
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1715999-1725240:-1:exon

LOC102510309
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 419612
gene: LOC102510309
product: arylamine N-acetyltransferase 1
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 25 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 13 samples with support for all annotated introns
transcript id: XM_032468386.1
SIO_010081: LOC102510309
subclass of: SO_0000673
so part of: LOC102510309
location: complement(join(1715999..1717708,1724550..1725240))
location: region:1715999-1725240:-1
so has part: feature:1724550-1725240:-1:exon
so has part: feature:1715999-1717708:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1724550-1725240:-1:exon

position:1724550:-1
position: 1724550
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1715999-1717708:-1:exon

position:1717708:-1
position: 1717708
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC102510309
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 419612
gene: LOC102510309
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: arylamine N-acetyltransferase 1
translation: MCRIPQERGDRGGRQPQERGALWALQSELRPPALVRPHNSNQPAGSSLGIMNIEAYFERIGYKNPRNKLDLETLTDILQHQLQAVPFENLNIHCGEAMELDLEAIFDQIVRRKRGGWCLQVNHLLYWALTTIGFETTMLGGYVYNSIANKYSKAMIHLLLKVTIDGRNYIADAGFGRSYQMWQPLELISGKDQPQVPCIFRLTEEGGIWYLDQIRREQYIPNEEFLNSDLLEKNAYRKIYSFTLEPRTIEDFESVNVFLQESPASVFTSKSFCSLQTPEGVRCLVGSTLTYRIFNYKDNSDLVEFKTLNEEEIEKELESMFNISLEKKLVPKHGDRFFTI
SIO_010081: LOC102510309
subclass of: SO_0000673
so part of: LOC102510309
location: complement(join(1716829..1717708,1724550..1724693))
location: region:1716829-1724693:-1
so has part: feature:1724550-1724693:-1:exon
so has part: feature:1716829-1717708:-1:exon

XP_032324277.1
type: Protein
SIO_000068: ncbiprotein

position:1716829:-1
position: 1716829
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1724693:-1
position: 1724693
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1724550-1724693:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1716829-1717708:-1:exon

CHRNA6
type: Gene
subclass of: SO_0000704
RO_0002162: 419612
gene: CHRNA6
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1777588..1791029
location: region:1777588-1791029:1
so has part: feature:1777588-1791029:1:exon
subclass of: SO_0000010

102510079
type: Gene
SIO_000068: ncbigene

position:1777588:1
position: 1777588
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1791029:1
position: 1791029
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1777588-1791029:1:exon

CHRNA6
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 419612
gene: CHRNA6
product: cholinergic receptor nicotinic alpha 6 subunit
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 29 Proteins, and 96% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_006188393.2
SIO_010081: CHRNA6
subclass of: SO_0000673
so part of: CHRNA6
location: join(1777588..1778469,1780598..1780737,1783292..1783336,1784611..1784720,1784821..1785799,1787132..1791029)
location: region:1777588-1791029:1
so has part: feature:1777588-1778469:1:exon
so has part: feature:1780598-1780737:1:exon
so has part: feature:1783292-1783336:1:exon
so has part: feature:1784611-1784720:1:exon
so has part: feature:1784821-1785799:1:exon
so has part: feature:1787132-1791029:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1777588-1778469:1:exon

position:1778469:1
position: 1778469
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1780598-1780737:1:exon

position:1780598:1
position: 1780598
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1780737:1
position: 1780737
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1783292-1783336:1:exon

position:1783292:1
position: 1783292
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1783336:1
position: 1783336
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1784611-1784720:1:exon

position:1784611:1
position: 1784611
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1784720:1
position: 1784720
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1784821-1785799:1:exon

position:1784821:1
position: 1784821
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1785799:1
position: 1785799
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1787132-1791029:1:exon

position:1787132:1
position: 1787132
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

CHRNA6
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 419612
gene: CHRNA6
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: neuronal acetylcholine receptor subunit alpha-6
translation: MRPRKGQGSLCFGLCLWWYVLIPFFEGCAGCASEERLFHELFSHYNQFIRPVENVSDPVTVHFEVAITQLADVDEVNQIMETNLWLRHIWNDYRLRWDPVEYDGIETLRVPADKIWKPDIVLYNNAVGDFQVEGKTKALLKHDGMITWTPPAIFKSSCPMDITFFPFDHQNCSLKFGSWTYDKAEIDLLIIGSKVDMNDFWENSEWEIVDASGYKHDIKYNCCEEIYTDITYSFYIRRLPMFYTINLIIPCLFISFLTVLVFYLPSDCGEKVTLCISVLLSLTVFLLVITETIPSTSLVIPLVGEYLLFTMVFVTLSIVVTVFVLNIHYRTPTTHTMPTWVKTVFLRLLPQILMMKRPLGKMRETRSDKNPKSLFRRPAKVKLDHRREPRLLEECSHCHHSSELAAPKRRLRHQPSRWVTESSEHSPEVEDVFNSVQFIAENMKNRNETKEVEDDWKYVAMVVDRVFLWVFIIVCVFGTAGLFLQPLLGNTGSS
SIO_010081: CHRNA6
subclass of: SO_0000673
so part of: CHRNA6
location: join(1778391..1778469,1780598..1780737,1783292..1783336,1784611..1784720,1784821..1785799,1787132..1787263)
location: region:1778391-1787263:1
so has part: feature:1778391-1778469:1:exon
so has part: feature:1780598-1780737:1:exon
so has part: feature:1783292-1783336:1:exon
so has part: feature:1784611-1784720:1:exon
so has part: feature:1784821-1785799:1:exon
so has part: feature:1787132-1787263:1:exon

XP_006188455.1
type: Protein
SIO_000068: ncbiprotein

position:1778391:1
position: 1778391
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1787263:1
position: 1787263
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1778391-1778469:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1780598-1780737:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1783292-1783336:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1784611-1784720:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1784821-1785799:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1787132-1787263:1:exon

CHRNB3
type: Gene
subclass of: SO_0000704
RO_0002162: 419612
gene: CHRNB3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1796702..1818107)
location: region:1796702-1818107:-1
so has part: feature:1796702-1818107:-1:exon
subclass of: SO_0000010

102514404
type: Gene
SIO_000068: ncbigene

position:1796702:-1
position: 1796702
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1818107:-1
position: 1818107
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1796702-1818107:-1:exon

CHRNB3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 419612
gene: CHRNB3
product: cholinergic receptor nicotinic beta 3 subunit, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 29 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_032468510.1
SIO_010081: CHRNB3
subclass of: SO_0000673
so part of: CHRNB3
location: complement(join(1796702..1797723,1799656..1800535,1800777..1800886,1810651..1810695,1811727..1811878,1817024..1817429,1817804..1818107))
location: region:1796702-1818107:-1
so has part: feature:1817804-1818107:-1:exon
so has part: feature:1817024-1817429:-1:exon
so has part: feature:1811727-1811878:-1:exon
so has part: feature:1810651-1810695:-1:exon
so has part: feature:1800777-1800886:-1:exon
so has part: feature:1799656-1800535:-1:exon
so has part: feature:1796702-1797723:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1817804-1818107:-1:exon

position:1817804:-1
position: 1817804
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1817024-1817429:-1:exon

position:1817024:-1
position: 1817024
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1817429:-1
position: 1817429
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1811727-1811878:-1:exon

position:1811727:-1
position: 1811727
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1811878:-1
position: 1811878
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1810651-1810695:-1:exon

position:1810651:-1
position: 1810651
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1810695:-1
position: 1810695
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1800777-1800886:-1:exon

position:1800777:-1
position: 1800777
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1800886:-1
position: 1800886
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1799656-1800535:-1:exon

position:1799656:-1
position: 1799656
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1800535:-1
position: 1800535
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1796702-1797723:-1:exon

position:1797723:-1
position: 1797723
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

CHRNB3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 419612
gene: CHRNB3
product: cholinergic receptor nicotinic beta 3 subunit, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 29 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_006188408.2
SIO_010081: CHRNB3
subclass of: SO_0000673
so part of: CHRNB3
location: complement(join(1796702..1797723,1799656..1800535,1800777..1800886,1810651..1810695,1811727..1811878,1817024..1817501))
location: region:1796702-1817501:-1
so has part: feature:1817024-1817501:-1:exon
so has part: feature:1811727-1811878:-1:exon
so has part: feature:1810651-1810695:-1:exon
so has part: feature:1800777-1800886:-1:exon
so has part: feature:1799656-1800535:-1:exon
so has part: feature:1796702-1797723:-1:exon

position:1817501:-1
position: 1817501
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1817024-1817501:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1811727-1811878:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1810651-1810695:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1800777-1800886:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1799656-1800535:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1796702-1797723:-1:exon

CHRNB3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 419612
gene: CHRNB3
product: cholinergic receptor nicotinic beta 3 subunit, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_032468511.1
SIO_010081: CHRNB3
subclass of: SO_0000673
so part of: CHRNB3
location: complement(join(1796702..1797723,1799656..1800535,1800777..1800886,1810651..1810695,1811727..1811878,1813114..1813187))
location: region:1796702-1813187:-1
so has part: feature:1813114-1813187:-1:exon
so has part: feature:1811727-1811878:-1:exon
so has part: feature:1810651-1810695:-1:exon
so has part: feature:1800777-1800886:-1:exon
so has part: feature:1799656-1800535:-1:exon
so has part: feature:1796702-1797723:-1:exon

position:1813187:-1
position: 1813187
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1813114-1813187:-1:exon

position:1813114:-1
position: 1813114
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1811727-1811878:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1810651-1810695:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1800777-1800886:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1799656-1800535:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1796702-1797723:-1:exon

CHRNB3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 419612
gene: CHRNB3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: neuronal acetylcholine receptor subunit beta-3 isoform X1
translation: MKLTDFILVLSALGVTPSAAAGFRSLVEEEDALLRHLFQGYQKWVRPVLHANDTIKVYFGLKISQLVDVDEKNQLMTTNVWLKQEWTDHKLRWDPDEYGGIRSIKVPSESLWLPDIVLFENADGRFEGSLMTKAIVRSDGTVVWTPPASYKSSCTMDVTFFPFDRQNCSMKFGSWTYDGTLVELVLVDENVDRKDFFDNGEWEILTAKGTEGSRRDGAGWYPFVAYSFVLRRLPLFYTLFLIVPCLGLSFLTVLVFYLPSDEGEKLSLSTSVLVSLTVFLLVIEEIIPSSSKVIPLIGEYLLFIMIFVTLSIIVTVFVINVHHRSSSTYHPMAPWVKRLFLQKLPTLLCMKDHVDRYSFPDKDEGKPVSGKVRDKTKQKQVSDGEKVLVAFLEKAADSIRYISSHVKKEHFISQVVQDWKFAAQVLDRIFLWLFLIVSVTGSVLIFTPALKMWLQSHY
SIO_010081: CHRNB3
subclass of: SO_0000673
so part of: CHRNB3
location: complement(join(1797589..1797723,1799656..1800535,1800777..1800886,1810651..1810695,1811727..1811878,1817024..1817078))
location: region:1797589-1817078:-1
so has part: feature:1817024-1817078:-1:exon
so has part: feature:1811727-1811878:-1:exon
so has part: feature:1810651-1810695:-1:exon
so has part: feature:1800777-1800886:-1:exon
so has part: feature:1799656-1800535:-1:exon
so has part: feature:1797589-1797723:-1:exon

XP_032324401.1
type: Protein
SIO_000068: ncbiprotein

position:1797589:-1
position: 1797589
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1817078:-1
position: 1817078
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1817024-1817078:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1811727-1811878:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1810651-1810695:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1800777-1800886:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1799656-1800535:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1797589-1797723:-1:exon

CHRNB3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 419612
gene: CHRNB3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: neuronal acetylcholine receptor subunit beta-3 isoform X1
translation: MKLTDFILVLSALGVTPSAAAGFRSLVEEEDALLRHLFQGYQKWVRPVLHANDTIKVYFGLKISQLVDVDEKNQLMTTNVWLKQEWTDHKLRWDPDEYGGIRSIKVPSESLWLPDIVLFENADGRFEGSLMTKAIVRSDGTVVWTPPASYKSSCTMDVTFFPFDRQNCSMKFGSWTYDGTLVELVLVDENVDRKDFFDNGEWEILTAKGTEGSRRDGAGWYPFVAYSFVLRRLPLFYTLFLIVPCLGLSFLTVLVFYLPSDEGEKLSLSTSVLVSLTVFLLVIEEIIPSSSKVIPLIGEYLLFIMIFVTLSIIVTVFVINVHHRSSSTYHPMAPWVKRLFLQKLPTLLCMKDHVDRYSFPDKDEGKPVSGKVRDKTKQKQVSDGEKVLVAFLEKAADSIRYISSHVKKEHFISQVVQDWKFAAQVLDRIFLWLFLIVSVTGSVLIFTPALKMWLQSHY
SIO_010081: CHRNB3
subclass of: SO_0000673
so part of: CHRNB3
location: complement(join(1797589..1797723,1799656..1800535,1800777..1800886,1810651..1810695,1811727..1811878,1817024..1817078))
location: region:1797589-1817078:-1
so has part: feature:1817024-1817078:-1:exon
so has part: feature:1811727-1811878:-1:exon
so has part: feature:1810651-1810695:-1:exon
so has part: feature:1800777-1800886:-1:exon
so has part: feature:1799656-1800535:-1:exon
so has part: feature:1797589-1797723:-1:exon

XP_006188470.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1817024-1817078:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1811727-1811878:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1810651-1810695:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1800777-1800886:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1799656-1800535:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1797589-1797723:-1:exon

CHRNB3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 419612
gene: CHRNB3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: neuronal acetylcholine receptor subunit beta-3 isoform X2
translation: MTTNVWLKQEWTDHKLRWDPDEYGGIRSIKVPSESLWLPDIVLFENADGRFEGSLMTKAIVRSDGTVVWTPPASYKSSCTMDVTFFPFDRQNCSMKFGSWTYDGTLVELVLVDENVDRKDFFDNGEWEILTAKGTEGSRRDGAGWYPFVAYSFVLRRLPLFYTLFLIVPCLGLSFLTVLVFYLPSDEGEKLSLSTSVLVSLTVFLLVIEEIIPSSSKVIPLIGEYLLFIMIFVTLSIIVTVFVINVHHRSSSTYHPMAPWVKRLFLQKLPTLLCMKDHVDRYSFPDKDEGKPVSGKVRDKTKQKQVSDGEKVLVAFLEKAADSIRYISSHVKKEHFISQVVQDWKFAAQVLDRIFLWLFLIVSVTGSVLIFTPALKMWLQSHY
SIO_010081: CHRNB3
subclass of: SO_0000673
so part of: CHRNB3
location: complement(join(1797589..1797723,1799656..1800535,1800777..1800886,1810651..1810677))
location: region:1797589-1810677:-1
so has part: feature:1810651-1810677:-1:exon
so has part: feature:1800777-1800886:-1:exon
so has part: feature:1799656-1800535:-1:exon
so has part: feature:1797589-1797723:-1:exon

XP_032324402.1
type: Protein
SIO_000068: ncbiprotein

position:1810677:-1
position: 1810677
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1810651-1810677:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1800777-1800886:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1799656-1800535:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1797589-1797723:-1:exon

LOC116660121
type: Gene
subclass of: SO_0000704
RO_0002162: 419612
gene: LOC116660121
note: Derived by automated computational analysis using gene prediction method: cmsearch.
pseudo: true
so part of: sequence
location: complement(1841420..1841533)
location: region:1841420-1841533:-1
so has part: feature:1841420-1841533:-1:exon

116660121
type: Gene
SIO_000068: ncbigene

position:1841420:-1
position: 1841420
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1841533:-1
position: 1841533
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1841420-1841533:-1:exon

LOC116660121
type: Exon
subclass of: SO_0000147
RO_0002162: 419612
gene: LOC116660121
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00004
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
pseudo: true
SIO_010081: LOC116660121
subclass of: SO_0000673
so part of: LOC116660121
location: complement(1841420..1841533)
location: region:1841420-1841533:-1
so has part: feature:1841420-1841533:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1841420-1841533:-1:exon

LOC116660043
type: Gene
subclass of: SO_0000704
RO_0002162: 419612
gene: LOC116660043
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: complement(1867499..1867653)
location: region:1867499-1867653:-1
so has part: feature:1867499-1867653:-1:exon

116660043
type: Gene
SIO_000068: ncbigene

position:1867499:-1
position: 1867499
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1867653:-1
position: 1867653
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1867499-1867653:-1:exon

LOC116660043
type: Exon
subclass of: SO_0000147
RO_0002162: 419612
gene: LOC116660043
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins
pseudo: true
SIO_010081: LOC116660043
subclass of: SO_0000673
so part of: LOC116660043
location: complement(1867499..1867653)
location: region:1867499-1867653:-1
so has part: feature:1867499-1867653:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1867499-1867653:-1:exon

SMIM19
type: Gene
subclass of: SO_0000704
RO_0002162: 419612
gene: SMIM19
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1889750..1898151)
location: region:1889750-1898151:-1
so has part: feature:1889750-1898151:-1:exon
subclass of: SO_0000010

102509596
type: Gene
SIO_000068: ncbigene

position:1889750:-1
position: 1889750
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1898151:-1
position: 1898151
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1889750-1898151:-1:exon

SMIM19
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 419612
gene: SMIM19
product: small integral membrane protein 19
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 12 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 43 samples with support for all annotated introns
transcript id: XM_032468570.1
SIO_010081: SMIM19
subclass of: SO_0000673
so part of: SMIM19
location: complement(join(1889750..1890278,1892149..1892273,1893801..1893938,1897945..1898151))
location: region:1889750-1898151:-1
so has part: feature:1897945-1898151:-1:exon
so has part: feature:1893801-1893938:-1:exon
so has part: feature:1892149-1892273:-1:exon
so has part: feature:1889750-1890278:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1897945-1898151:-1:exon

position:1897945:-1
position: 1897945
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1893801-1893938:-1:exon

position:1893801:-1
position: 1893801
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1893938:-1
position: 1893938
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1892149-1892273:-1:exon

position:1892149:-1
position: 1892149
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1892273:-1
position: 1892273
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1889750-1890278:-1:exon

position:1890278:-1
position: 1890278
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

SMIM19
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 419612
gene: SMIM19
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: small integral membrane protein 19
translation: MPGGYGVMGADGSMDYSVHEAWNEATNVYLVVILVSFGLFMYAKRNKRKIMRIFSLPPTAEALSEPNFYDTISKIRLRQQLEMYSISRKYDYQQPQNQADSVQLSLE
SIO_010081: SMIM19
subclass of: SO_0000673
so part of: SMIM19
location: complement(join(1890214..1890278,1892149..1892273,1893801..1893934))
location: region:1890214-1893934:-1
so has part: feature:1893801-1893934:-1:exon
so has part: feature:1892149-1892273:-1:exon
so has part: feature:1890214-1890278:-1:exon

XP_032324461.1
type: Protein
SIO_000068: ncbiprotein

position:1890214:-1
position: 1890214
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1893934:-1
position: 1893934
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1893801-1893934:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1892149-1892273:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1890214-1890278:-1:exon

SLC20A2
type: Gene
subclass of: SO_0000704
RO_0002162: 419612
gene: SLC20A2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1897974..1991299
location: region:1897974-1991299:1
so has part: feature:1897974-1991299:1:exon
subclass of: SO_0000010

102514162
type: Gene
SIO_000068: ncbigene

position:1897974:1
position: 1897974
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1991299:1
position: 1991299
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1897974-1991299:1:exon

SLC20A2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 419612
gene: SLC20A2
product: solute carrier family 20 member 2, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 17 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_032468566.1
SIO_010081: SLC20A2
subclass of: SO_0000673
so part of: SLC20A2
location: join(1897974..1898109,1902294..1902593,1903770..1903869,1952246..1952342,1952790..1953343,1958363..1958503,1959831..1959916,1962865..1962961,1970888..1971004,1975080..1975280,1976219..1976792,1979830..1980015,1980980..1981064,1989807..1991299)
location: region:1897974-1991299:1
so has part: feature:1897974-1898109:1:exon
so has part: feature:1902294-1902593:1:exon
so has part: feature:1903770-1903869:1:exon
so has part: feature:1952246-1952342:1:exon
so has part: feature:1952790-1953343:1:exon
so has part: feature:1958363-1958503:1:exon
so has part: feature:1959831-1959916:1:exon
so has part: feature:1962865-1962961:1:exon
so has part: feature:1970888-1971004:1:exon
so has part: feature:1975080-1975280:1:exon
so has part: feature:1976219-1976792:1:exon
so has part: feature:1979830-1980015:1:exon
so has part: feature:1980980-1981064:1:exon
so has part: feature:1989807-1991299:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1897974-1898109:1:exon

position:1898109:1
position: 1898109
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1902294-1902593:1:exon

position:1902294:1
position: 1902294
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1902593:1
position: 1902593
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1903770-1903869:1:exon

position:1903770:1
position: 1903770
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1903869:1
position: 1903869
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1952246-1952342:1:exon

position:1952246:1
position: 1952246
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1952342:1
position: 1952342
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1952790-1953343:1:exon

position:1952790:1
position: 1952790
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1953343:1
position: 1953343
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1958363-1958503:1:exon

position:1958363:1
position: 1958363
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1958503:1
position: 1958503
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1959831-1959916:1:exon

position:1959831:1
position: 1959831
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1959916:1
position: 1959916
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1962865-1962961:1:exon

position:1962865:1
position: 1962865
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1962961:1
position: 1962961
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1970888-1971004:1:exon

position:1970888:1
position: 1970888
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1971004:1
position: 1971004
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1975080-1975280:1:exon

position:1975080:1
position: 1975080
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1975280:1
position: 1975280
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1976219-1976792:1:exon

position:1976219:1
position: 1976219
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1976792:1
position: 1976792
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1979830-1980015:1:exon

position:1979830:1
position: 1979830
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1980015:1
position: 1980015
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1980980-1981064:1:exon

position:1980980:1
position: 1980980
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1981064:1
position: 1981064
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:1989807-1991299:1:exon

position:1989807:1
position: 1989807
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

SLC20A2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 419612
gene: SLC20A2
product: solute carrier family 20 member 2, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 17 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 37 samples with support for all annotated introns
transcript id: XM_032468567.1
SIO_010081: SLC20A2
subclass of: SO_0000673
so part of: SLC20A2
location: join(1897977..1898109,1952790..1953343,1958363..1958503,1959831..1959916,1962865..1962961,1970888..1971004,1975080..1975280,1976219..1976792,1979830..1980015,1980980..1981064,1989807..1991299)
location: region:1897977-1991299:1
so has part: feature:1897977-1898109:1:exon
so has part: feature:1952790-1953343:1:exon
so has part: feature:1958363-1958503:1:exon
so has part: feature:1959831-1959916:1:exon
so has part: feature:1962865-1962961:1:exon
so has part: feature:1970888-1971004:1:exon
so has part: feature:1975080-1975280:1:exon
so has part: feature:1976219-1976792:1:exon
so has part: feature:1979830-1980015:1:exon
so has part: feature:1980980-1981064:1:exon
so has part: feature:1989807-1991299:1:exon

position:1897977:1
position: 1897977
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1897977-1898109:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1952790-1953343:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1958363-1958503:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1959831-1959916:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1962865-1962961:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1970888-1971004:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1975080-1975280:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1976219-1976792:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1979830-1980015:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1980980-1981064:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1989807-1991299:1:exon

SLC20A2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 419612
gene: SLC20A2
product: solute carrier family 20 member 2, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 17 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns
transcript id: XM_032468564.1
SIO_010081: SLC20A2
subclass of: SO_0000673
so part of: SLC20A2
location: join(1898228..1902593,1903770..1903869,1952246..1952342,1952790..1953343,1958363..1958503,1959831..1959916,1962865..1962961,1970888..1971004,1975080..1975280,1976219..1976792,1979830..1980015,1980980..1981064,1989807..1991299)
location: region:1898228-1991299:1
so has part: feature:1898228-1902593:1:exon
so has part: feature:1903770-1903869:1:exon
so has part: feature:1952246-1952342:1:exon
so has part: feature:1952790-1953343:1:exon
so has part: feature:1958363-1958503:1:exon
so has part: feature:1959831-1959916:1:exon
so has part: feature:1962865-1962961:1:exon
so has part: feature:1970888-1971004:1:exon
so has part: feature:1975080-1975280:1:exon
so has part: feature:1976219-1976792:1:exon
so has part: feature:1979830-1980015:1:exon
so has part: feature:1980980-1981064:1:exon
so has part: feature:1989807-1991299:1:exon

position:1898228:1
position: 1898228
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1898228-1902593:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1903770-1903869:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1952246-1952342:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1952790-1953343:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1958363-1958503:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1959831-1959916:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1962865-1962961:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1970888-1971004:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1975080-1975280:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1976219-1976792:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1979830-1980015:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1980980-1981064:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1989807-1991299:1:exon

SLC20A2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 419612
gene: SLC20A2
product: solute carrier family 20 member 2, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 17 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 28 samples with support for all annotated introns
transcript id: XM_032468565.1
SIO_010081: SLC20A2
subclass of: SO_0000673
so part of: SLC20A2
location: join(1898228..1902593,1903770..1903869,1952790..1953343,1958363..1958503,1959831..1959916,1962865..1962961,1970888..1971004,1975080..1975280,1976219..1976792,1979830..1980015,1980980..1981064,1989807..1991299)
location: region:1898228-1991299:1
so has part: feature:1898228-1902593:1:exon
so has part: feature:1903770-1903869:1:exon
so has part: feature:1952790-1953343:1:exon
so has part: feature:1958363-1958503:1:exon
so has part: feature:1959831-1959916:1:exon
so has part: feature:1962865-1962961:1:exon
so has part: feature:1970888-1971004:1:exon
so has part: feature:1975080-1975280:1:exon
so has part: feature:1976219-1976792:1:exon
so has part: feature:1979830-1980015:1:exon
so has part: feature:1980980-1981064:1:exon
so has part: feature:1989807-1991299:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1898228-1902593:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1903770-1903869:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1952790-1953343:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1958363-1958503:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1959831-1959916:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1962865-1962961:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1970888-1971004:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1975080-1975280:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1976219-1976792:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1979830-1980015:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1980980-1981064:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1989807-1991299:1:exon

SLC20A2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 419612
gene: SLC20A2
product: solute carrier family 20 member 2, transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 17 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
transcript id: XM_032468568.1
SIO_010081: SLC20A2
subclass of: SO_0000673
so part of: SLC20A2
location: join(1928726..1928990,1952246..1952342,1952790..1953343,1958363..1958503,1959831..1959916,1962865..1962961,1970888..1971004,1975080..1975280,1976219..1976792,1979830..1980015,1980980..1981064,1989807..1991299)
location: region:1928726-1991299:1
so has part: feature:1928726-1928990:1:exon
so has part: feature:1952246-1952342:1:exon
so has part: feature:1952790-1953343:1:exon
so has part: feature:1958363-1958503:1:exon
so has part: feature:1959831-1959916:1:exon
so has part: feature:1962865-1962961:1:exon
so has part: feature:1970888-1971004:1:exon
so has part: feature:1975080-1975280:1:exon
so has part: feature:1976219-1976792:1:exon
so has part: feature:1979830-1980015:1:exon
so has part: feature:1980980-1981064:1:exon
so has part: feature:1989807-1991299:1:exon

position:1928726:1
position: 1928726
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1928726-1928990:1:exon

position:1928990:1
position: 1928990
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1952246-1952342:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1952790-1953343:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1958363-1958503:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1959831-1959916:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1962865-1962961:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1970888-1971004:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1975080-1975280:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1976219-1976792:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1979830-1980015:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1980980-1981064:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1989807-1991299:1:exon

SLC20A2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 419612
gene: SLC20A2
product: solute carrier family 20 member 2, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 17 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 33 samples with support for all annotated introns
transcript id: XM_032468563.1
SIO_010081: SLC20A2
subclass of: SO_0000673
so part of: SLC20A2
location: join(1928726..1928990,1952790..1953343,1958363..1958503,1959831..1959916,1962865..1962961,1970888..1971004,1975080..1975280,1976219..1976792,1979830..1980015,1980980..1981064,1989807..1991299)
location: region:1928726-1991299:1
so has part: feature:1928726-1928990:1:exon
so has part: feature:1952790-1953343:1:exon
so has part: feature:1958363-1958503:1:exon
so has part: feature:1959831-1959916:1:exon
so has part: feature:1962865-1962961:1:exon
so has part: feature:1970888-1971004:1:exon
so has part: feature:1975080-1975280:1:exon
so has part: feature:1976219-1976792:1:exon
so has part: feature:1979830-1980015:1:exon
so has part: feature:1980980-1981064:1:exon
so has part: feature:1989807-1991299:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1928726-1928990:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1952790-1953343:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1958363-1958503:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1959831-1959916:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1962865-1962961:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1970888-1971004:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1975080-1975280:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1976219-1976792:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1979830-1980015:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1980980-1981064:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1989807-1991299:1:exon

LOC116660044
type: Gene
subclass of: SO_0000704
RO_0002162: 419612
gene: LOC116660044
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1930053..1937112)
location: region:1930053-1937112:-1
so has part: feature:1930053-1937112:-1:exon
subclass of: SO_0000011

116660044
type: Gene
SIO_000068: ncbigene

position:1930053:-1
position: 1930053
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1937112:-1
position: 1937112
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1930053-1937112:-1:exon

LOC116660044
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 419612
nc RNA class: lncRNA
gene: LOC116660044
product: uncharacterized LOC116660044
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XR_004315393.1
SIO_010081: LOC116660044
subclass of: SO_0000673
so part of: LOC116660044
location: complement(join(1930053..1930443,1933463..1933539,1936981..1937112))
location: region:1930053-1937112:-1
so has part: feature:1936981-1937112:-1:exon
so has part: feature:1933463-1933539:-1:exon
so has part: feature:1930053-1930443:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1936981-1937112:-1:exon

position:1936981:-1
position: 1936981
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1933463-1933539:-1:exon

position:1933463:-1
position: 1933463
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1933539:-1
position: 1933539
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1930053-1930443:-1:exon

position:1930443:-1
position: 1930443
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

SLC20A2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 419612
gene: SLC20A2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: sodium-dependent phosphate transporter 2 isoform X1
translation: MAMDEYLWMVILGFIIAFILAFSVGANDVANSFGTAVGSGVVTLRQACILASIFETTGSVLLGAKVGETIRKGIIDVNLYNDTVETLMAGEVSAMVGSAVWQLIASFLRLPISGTHCIVGSTIGFSLVAIGTKGVQWMELVKIVASWFISPLLSGFMSGVLFVLIRMFILKKEDPVPNGLRALPVFYAATIAINVFSIMYTGAPVLGLVLPMWAIALISFGVALLFALFVWLFVCPWMRRKIAGKLQKEGALSRVSDESLHKIQEVESPVFKELPGAKANDDSTVPLTGSAVESGTSEGTSTGHHPRATYGRALSMTHGAAKSPVSNGTFGFDGPARGDGHVYHTVHKDSGLYKDLLHRIHDERPGQDGGPRLLRRNNSYTCYTAAICGLPGLATLRADAPAAPEDSEKLVADAVAYSKKRLRYDSYSSYCNAVAEAEIEAEEGGVEMKLAAELADPDGPREDAADEEKEEKDEPEVHLLFHFLQVLTACFGSFAHGGNDVSNAIGPLVALWLIYEQGVVLQESVTPVWLLFYGGVGICTGLWVWGRRVIQTMGKDLTPITPSSGFTIELASAFTVVIASNIGLPVSTTHCKVGSVVAVGWIRSRKAVDWRLFRNIFVAWFVTVPVAGLFSAAIMALLVYAILPFV
SIO_010081: SLC20A2
subclass of: SO_0000673
so part of: SLC20A2
location: join(1953055..1953343,1958363..1958503,1959831..1959916,1962865..1962961,1970888..1971004,1975080..1975280,1976219..1976792,1979830..1980015,1980980..1981064,1989807..1989971)
location: region:1953055-1989971:1
so has part: feature:1953055-1953343:1:exon
so has part: feature:1958363-1958503:1:exon
so has part: feature:1959831-1959916:1:exon
so has part: feature:1962865-1962961:1:exon
so has part: feature:1970888-1971004:1:exon
so has part: feature:1975080-1975280:1:exon
so has part: feature:1976219-1976792:1:exon
so has part: feature:1979830-1980015:1:exon
so has part: feature:1980980-1981064:1:exon
so has part: feature:1989807-1989971:1:exon

XP_032324454.1
type: Protein
SIO_000068: ncbiprotein

position:1953055:1
position: 1953055
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1989971:1
position: 1989971
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1953055-1953343:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1958363-1958503:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1959831-1959916:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1962865-1962961:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1970888-1971004:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1975080-1975280:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1976219-1976792:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1979830-1980015:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1980980-1981064:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1989807-1989971:1:exon

SLC20A2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 419612
gene: SLC20A2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: sodium-dependent phosphate transporter 2 isoform X1
translation: MAMDEYLWMVILGFIIAFILAFSVGANDVANSFGTAVGSGVVTLRQACILASIFETTGSVLLGAKVGETIRKGIIDVNLYNDTVETLMAGEVSAMVGSAVWQLIASFLRLPISGTHCIVGSTIGFSLVAIGTKGVQWMELVKIVASWFISPLLSGFMSGVLFVLIRMFILKKEDPVPNGLRALPVFYAATIAINVFSIMYTGAPVLGLVLPMWAIALISFGVALLFALFVWLFVCPWMRRKIAGKLQKEGALSRVSDESLHKIQEVESPVFKELPGAKANDDSTVPLTGSAVESGTSEGTSTGHHPRATYGRALSMTHGAAKSPVSNGTFGFDGPARGDGHVYHTVHKDSGLYKDLLHRIHDERPGQDGGPRLLRRNNSYTCYTAAICGLPGLATLRADAPAAPEDSEKLVADAVAYSKKRLRYDSYSSYCNAVAEAEIEAEEGGVEMKLAAELADPDGPREDAADEEKEEKDEPEVHLLFHFLQVLTACFGSFAHGGNDVSNAIGPLVALWLIYEQGVVLQESVTPVWLLFYGGVGICTGLWVWGRRVIQTMGKDLTPITPSSGFTIELASAFTVVIASNIGLPVSTTHCKVGSVVAVGWIRSRKAVDWRLFRNIFVAWFVTVPVAGLFSAAIMALLVYAILPFV
SIO_010081: SLC20A2
subclass of: SO_0000673
so part of: SLC20A2
location: join(1953055..1953343,1958363..1958503,1959831..1959916,1962865..1962961,1970888..1971004,1975080..1975280,1976219..1976792,1979830..1980015,1980980..1981064,1989807..1989971)
location: region:1953055-1989971:1
so has part: feature:1953055-1953343:1:exon
so has part: feature:1958363-1958503:1:exon
so has part: feature:1959831-1959916:1:exon
so has part: feature:1962865-1962961:1:exon
so has part: feature:1970888-1971004:1:exon
so has part: feature:1975080-1975280:1:exon
so has part: feature:1976219-1976792:1:exon
so has part: feature:1979830-1980015:1:exon
so has part: feature:1980980-1981064:1:exon
so has part: feature:1989807-1989971:1:exon

XP_032324455.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1953055-1953343:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1958363-1958503:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1959831-1959916:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1962865-1962961:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1970888-1971004:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1975080-1975280:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1976219-1976792:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1979830-1980015:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1980980-1981064:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1989807-1989971:1:exon

SLC20A2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 419612
gene: SLC20A2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: sodium-dependent phosphate transporter 2 isoform X1
translation: MAMDEYLWMVILGFIIAFILAFSVGANDVANSFGTAVGSGVVTLRQACILASIFETTGSVLLGAKVGETIRKGIIDVNLYNDTVETLMAGEVSAMVGSAVWQLIASFLRLPISGTHCIVGSTIGFSLVAIGTKGVQWMELVKIVASWFISPLLSGFMSGVLFVLIRMFILKKEDPVPNGLRALPVFYAATIAINVFSIMYTGAPVLGLVLPMWAIALISFGVALLFALFVWLFVCPWMRRKIAGKLQKEGALSRVSDESLHKIQEVESPVFKELPGAKANDDSTVPLTGSAVESGTSEGTSTGHHPRATYGRALSMTHGAAKSPVSNGTFGFDGPARGDGHVYHTVHKDSGLYKDLLHRIHDERPGQDGGPRLLRRNNSYTCYTAAICGLPGLATLRADAPAAPEDSEKLVADAVAYSKKRLRYDSYSSYCNAVAEAEIEAEEGGVEMKLAAELADPDGPREDAADEEKEEKDEPEVHLLFHFLQVLTACFGSFAHGGNDVSNAIGPLVALWLIYEQGVVLQESVTPVWLLFYGGVGICTGLWVWGRRVIQTMGKDLTPITPSSGFTIELASAFTVVIASNIGLPVSTTHCKVGSVVAVGWIRSRKAVDWRLFRNIFVAWFVTVPVAGLFSAAIMALLVYAILPFV
SIO_010081: SLC20A2
subclass of: SO_0000673
so part of: SLC20A2
location: join(1953055..1953343,1958363..1958503,1959831..1959916,1962865..1962961,1970888..1971004,1975080..1975280,1976219..1976792,1979830..1980015,1980980..1981064,1989807..1989971)
location: region:1953055-1989971:1
so has part: feature:1953055-1953343:1:exon
so has part: feature:1958363-1958503:1:exon
so has part: feature:1959831-1959916:1:exon
so has part: feature:1962865-1962961:1:exon
so has part: feature:1970888-1971004:1:exon
so has part: feature:1975080-1975280:1:exon
so has part: feature:1976219-1976792:1:exon
so has part: feature:1979830-1980015:1:exon
so has part: feature:1980980-1981064:1:exon
so has part: feature:1989807-1989971:1:exon

XP_032324456.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1953055-1953343:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1958363-1958503:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1959831-1959916:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1962865-1962961:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1970888-1971004:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1975080-1975280:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1976219-1976792:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1979830-1980015:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1980980-1981064:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1989807-1989971:1:exon

SLC20A2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 419612
gene: SLC20A2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: sodium-dependent phosphate transporter 2 isoform X1
translation: MAMDEYLWMVILGFIIAFILAFSVGANDVANSFGTAVGSGVVTLRQACILASIFETTGSVLLGAKVGETIRKGIIDVNLYNDTVETLMAGEVSAMVGSAVWQLIASFLRLPISGTHCIVGSTIGFSLVAIGTKGVQWMELVKIVASWFISPLLSGFMSGVLFVLIRMFILKKEDPVPNGLRALPVFYAATIAINVFSIMYTGAPVLGLVLPMWAIALISFGVALLFALFVWLFVCPWMRRKIAGKLQKEGALSRVSDESLHKIQEVESPVFKELPGAKANDDSTVPLTGSAVESGTSEGTSTGHHPRATYGRALSMTHGAAKSPVSNGTFGFDGPARGDGHVYHTVHKDSGLYKDLLHRIHDERPGQDGGPRLLRRNNSYTCYTAAICGLPGLATLRADAPAAPEDSEKLVADAVAYSKKRLRYDSYSSYCNAVAEAEIEAEEGGVEMKLAAELADPDGPREDAADEEKEEKDEPEVHLLFHFLQVLTACFGSFAHGGNDVSNAIGPLVALWLIYEQGVVLQESVTPVWLLFYGGVGICTGLWVWGRRVIQTMGKDLTPITPSSGFTIELASAFTVVIASNIGLPVSTTHCKVGSVVAVGWIRSRKAVDWRLFRNIFVAWFVTVPVAGLFSAAIMALLVYAILPFV
SIO_010081: SLC20A2
subclass of: SO_0000673
so part of: SLC20A2
location: join(1953055..1953343,1958363..1958503,1959831..1959916,1962865..1962961,1970888..1971004,1975080..1975280,1976219..1976792,1979830..1980015,1980980..1981064,1989807..1989971)
location: region:1953055-1989971:1
so has part: feature:1953055-1953343:1:exon
so has part: feature:1958363-1958503:1:exon
so has part: feature:1959831-1959916:1:exon
so has part: feature:1962865-1962961:1:exon
so has part: feature:1970888-1971004:1:exon
so has part: feature:1975080-1975280:1:exon
so has part: feature:1976219-1976792:1:exon
so has part: feature:1979830-1980015:1:exon
so has part: feature:1980980-1981064:1:exon
so has part: feature:1989807-1989971:1:exon

XP_032324457.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1953055-1953343:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1958363-1958503:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1959831-1959916:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1962865-1962961:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1970888-1971004:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1975080-1975280:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1976219-1976792:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1979830-1980015:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1980980-1981064:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1989807-1989971:1:exon

SLC20A2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 419612
gene: SLC20A2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: sodium-dependent phosphate transporter 2 isoform X1
translation: MAMDEYLWMVILGFIIAFILAFSVGANDVANSFGTAVGSGVVTLRQACILASIFETTGSVLLGAKVGETIRKGIIDVNLYNDTVETLMAGEVSAMVGSAVWQLIASFLRLPISGTHCIVGSTIGFSLVAIGTKGVQWMELVKIVASWFISPLLSGFMSGVLFVLIRMFILKKEDPVPNGLRALPVFYAATIAINVFSIMYTGAPVLGLVLPMWAIALISFGVALLFALFVWLFVCPWMRRKIAGKLQKEGALSRVSDESLHKIQEVESPVFKELPGAKANDDSTVPLTGSAVESGTSEGTSTGHHPRATYGRALSMTHGAAKSPVSNGTFGFDGPARGDGHVYHTVHKDSGLYKDLLHRIHDERPGQDGGPRLLRRNNSYTCYTAAICGLPGLATLRADAPAAPEDSEKLVADAVAYSKKRLRYDSYSSYCNAVAEAEIEAEEGGVEMKLAAELADPDGPREDAADEEKEEKDEPEVHLLFHFLQVLTACFGSFAHGGNDVSNAIGPLVALWLIYEQGVVLQESVTPVWLLFYGGVGICTGLWVWGRRVIQTMGKDLTPITPSSGFTIELASAFTVVIASNIGLPVSTTHCKVGSVVAVGWIRSRKAVDWRLFRNIFVAWFVTVPVAGLFSAAIMALLVYAILPFV
SIO_010081: SLC20A2
subclass of: SO_0000673
so part of: SLC20A2
location: join(1953055..1953343,1958363..1958503,1959831..1959916,1962865..1962961,1970888..1971004,1975080..1975280,1976219..1976792,1979830..1980015,1980980..1981064,1989807..1989971)
location: region:1953055-1989971:1
so has part: feature:1953055-1953343:1:exon
so has part: feature:1958363-1958503:1:exon
so has part: feature:1959831-1959916:1:exon
so has part: feature:1962865-1962961:1:exon
so has part: feature:1970888-1971004:1:exon
so has part: feature:1975080-1975280:1:exon
so has part: feature:1976219-1976792:1:exon
so has part: feature:1979830-1980015:1:exon
so has part: feature:1980980-1981064:1:exon
so has part: feature:1989807-1989971:1:exon

XP_032324458.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1953055-1953343:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1958363-1958503:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1959831-1959916:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1962865-1962961:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1970888-1971004:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1975080-1975280:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1976219-1976792:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1979830-1980015:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1980980-1981064:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1989807-1989971:1:exon

SLC20A2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 419612
gene: SLC20A2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: sodium-dependent phosphate transporter 2 isoform X1
translation: MAMDEYLWMVILGFIIAFILAFSVGANDVANSFGTAVGSGVVTLRQACILASIFETTGSVLLGAKVGETIRKGIIDVNLYNDTVETLMAGEVSAMVGSAVWQLIASFLRLPISGTHCIVGSTIGFSLVAIGTKGVQWMELVKIVASWFISPLLSGFMSGVLFVLIRMFILKKEDPVPNGLRALPVFYAATIAINVFSIMYTGAPVLGLVLPMWAIALISFGVALLFALFVWLFVCPWMRRKIAGKLQKEGALSRVSDESLHKIQEVESPVFKELPGAKANDDSTVPLTGSAVESGTSEGTSTGHHPRATYGRALSMTHGAAKSPVSNGTFGFDGPARGDGHVYHTVHKDSGLYKDLLHRIHDERPGQDGGPRLLRRNNSYTCYTAAICGLPGLATLRADAPAAPEDSEKLVADAVAYSKKRLRYDSYSSYCNAVAEAEIEAEEGGVEMKLAAELADPDGPREDAADEEKEEKDEPEVHLLFHFLQVLTACFGSFAHGGNDVSNAIGPLVALWLIYEQGVVLQESVTPVWLLFYGGVGICTGLWVWGRRVIQTMGKDLTPITPSSGFTIELASAFTVVIASNIGLPVSTTHCKVGSVVAVGWIRSRKAVDWRLFRNIFVAWFVTVPVAGLFSAAIMALLVYAILPFV
SIO_010081: SLC20A2
subclass of: SO_0000673
so part of: SLC20A2
location: join(1953055..1953343,1958363..1958503,1959831..1959916,1962865..1962961,1970888..1971004,1975080..1975280,1976219..1976792,1979830..1980015,1980980..1981064,1989807..1989971)
location: region:1953055-1989971:1
so has part: feature:1953055-1953343:1:exon
so has part: feature:1958363-1958503:1:exon
so has part: feature:1959831-1959916:1:exon
so has part: feature:1962865-1962961:1:exon
so has part: feature:1970888-1971004:1:exon
so has part: feature:1975080-1975280:1:exon
so has part: feature:1976219-1976792:1:exon
so has part: feature:1979830-1980015:1:exon
so has part: feature:1980980-1981064:1:exon
so has part: feature:1989807-1989971:1:exon

XP_032324459.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1953055-1953343:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1958363-1958503:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1959831-1959916:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1962865-1962961:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1970888-1971004:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1975080-1975280:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1976219-1976792:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1979830-1980015:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1980980-1981064:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1989807-1989971:1:exon

SLC20A2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 419612
gene: SLC20A2
product: solute carrier family 20 member 2, transcript variant X7
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 16 samples with support for all annotated introns
transcript id: XM_032468569.1
SIO_010081: SLC20A2
subclass of: SO_0000673
so part of: SLC20A2
location: join(1958443..1958553,1959831..1959916,1962865..1962961,1970888..1971004,1975080..1975280,1976219..1976792,1979830..1980015,1980980..1981064,1989807..1991299)
location: region:1958443-1991299:1
so has part: feature:1958443-1958553:1:exon
so has part: feature:1959831-1959916:1:exon
so has part: feature:1962865-1962961:1:exon
so has part: feature:1970888-1971004:1:exon
so has part: feature:1975080-1975280:1:exon
so has part: feature:1976219-1976792:1:exon
so has part: feature:1979830-1980015:1:exon
so has part: feature:1980980-1981064:1:exon
so has part: feature:1989807-1991299:1:exon

position:1958443:1
position: 1958443
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1958443-1958553:1:exon

position:1958553:1
position: 1958553
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1959831-1959916:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1962865-1962961:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1970888-1971004:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1975080-1975280:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1976219-1976792:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1979830-1980015:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1980980-1981064:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1989807-1991299:1:exon

SLC20A2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 419612
gene: SLC20A2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: sodium-dependent phosphate transporter 2 isoform X2
translation: MSGVLFVLIRMFILKKEDPVPNGLRALPVFYAATIAINVFSIMYTGAPVLGLVLPMWAIALISFGVALLFALFVWLFVCPWMRRKIAGKLQKEGALSRVSDESLHKIQEVESPVFKELPGAKANDDSTVPLTGSAVESGTSEGTSTGHHPRATYGRALSMTHGAAKSPVSNGTFGFDGPARGDGHVYHTVHKDSGLYKDLLHRIHDERPGQDGGPRLLRRNNSYTCYTAAICGLPGLATLRADAPAAPEDSEKLVADAVAYSKKRLRYDSYSSYCNAVAEAEIEAEEGGVEMKLAAELADPDGPREDAADEEKEEKDEPEVHLLFHFLQVLTACFGSFAHGGNDVSNAIGPLVALWLIYEQGVVLQESVTPVWLLFYGGVGICTGLWVWGRRVIQTMGKDLTPITPSSGFTIELASAFTVVIASNIGLPVSTTHCKVGSVVAVGWIRSRKAVDWRLFRNIFVAWFVTVPVAGLFSAAIMALLVYAILPFV
SIO_010081: SLC20A2
subclass of: SO_0000673
so part of: SLC20A2
location: join(1959869..1959916,1962865..1962961,1970888..1971004,1975080..1975280,1976219..1976792,1979830..1980015,1980980..1981064,1989807..1989971)
location: region:1959869-1989971:1
so has part: feature:1959869-1959916:1:exon
so has part: feature:1962865-1962961:1:exon
so has part: feature:1970888-1971004:1:exon
so has part: feature:1975080-1975280:1:exon
so has part: feature:1976219-1976792:1:exon
so has part: feature:1979830-1980015:1:exon
so has part: feature:1980980-1981064:1:exon
so has part: feature:1989807-1989971:1:exon

XP_032324460.1
type: Protein
SIO_000068: ncbiprotein

position:1959869:1
position: 1959869
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1959869-1959916:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1962865-1962961:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1970888-1971004:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1975080-1975280:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1976219-1976792:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1979830-1980015:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1980980-1981064:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1989807-1989971:1:exon

VDAC3
type: Gene
subclass of: SO_0000704
RO_0002162: 419612
gene: VDAC3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1996270..2009118)
location: region:1996270-2009118:-1
so has part: feature:1996270-2009118:-1:exon
subclass of: SO_0000010

102509027
type: Gene
SIO_000068: ncbigene

position:1996270:-1
position: 1996270
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2009118:-1
position: 2009118
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1996270-2009118:-1:exon

VDAC3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 419612
gene: VDAC3
product: voltage dependent anion channel 3, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 37 samples with support for all annotated introns
transcript id: XM_032468409.1
SIO_010081: VDAC3
subclass of: SO_0000673
so part of: VDAC3
location: complement(join(1996270..1996769,1997190..1997247,1998132..1998282,1999572..1999799,2000837..2000889,2001886..2002038,2004631..2004633,2005769..2005818,2006629..2006697,2008925..2009118))
location: region:1996270-2009118:-1
so has part: feature:2008925-2009118:-1:exon
so has part: feature:2006629-2006697:-1:exon
so has part: feature:2005769-2005818:-1:exon
so has part: feature:2004631-2004633:-1:exon
so has part: feature:2001886-2002038:-1:exon
so has part: feature:2000837-2000889:-1:exon
so has part: feature:1999572-1999799:-1:exon
so has part: feature:1998132-1998282:-1:exon
so has part: feature:1997190-1997247:-1:exon
so has part: feature:1996270-1996769:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2008925-2009118:-1:exon

position:2008925:-1
position: 2008925
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2006629-2006697:-1:exon

position:2006629:-1
position: 2006629
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2006697:-1
position: 2006697
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2005769-2005818:-1:exon

position:2005769:-1
position: 2005769
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2005818:-1
position: 2005818
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2004631-2004633:-1:exon

position:2004631:-1
position: 2004631
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2004633:-1
position: 2004633
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2001886-2002038:-1:exon

position:2001886:-1
position: 2001886
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2002038:-1
position: 2002038
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2000837-2000889:-1:exon

position:2000837:-1
position: 2000837
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2000889:-1
position: 2000889
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1999572-1999799:-1:exon

position:1999572:-1
position: 1999572
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1999799:-1
position: 1999799
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1998132-1998282:-1:exon

position:1998132:-1
position: 1998132
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1998282:-1
position: 1998282
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1997190-1997247:-1:exon

position:1997190:-1
position: 1997190
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1997247:-1
position: 1997247
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1996270-1996769:-1:exon

position:1996769:-1
position: 1996769
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

VDAC3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 419612
gene: VDAC3
product: voltage dependent anion channel 3, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 mRNAs, 29 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 46 samples with support for all annotated introns
transcript id: XM_032468410.1
SIO_010081: VDAC3
subclass of: SO_0000673
so part of: VDAC3
location: complement(join(1996270..1996769,1997190..1997247,1998132..1998282,1999572..1999799,2000837..2000889,2001886..2002038,2005769..2005818,2006629..2006697,2008925..2009116))
location: region:1996270-2009116:-1
so has part: feature:2008925-2009116:-1:exon
so has part: feature:2006629-2006697:-1:exon
so has part: feature:2005769-2005818:-1:exon
so has part: feature:2001886-2002038:-1:exon
so has part: feature:2000837-2000889:-1:exon
so has part: feature:1999572-1999799:-1:exon
so has part: feature:1998132-1998282:-1:exon
so has part: feature:1997190-1997247:-1:exon
so has part: feature:1996270-1996769:-1:exon

position:2009116:-1
position: 2009116
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2008925-2009116:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2006629-2006697:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2005769-2005818:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2001886-2002038:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2000837-2000889:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1999572-1999799:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1998132-1998282:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1997190-1997247:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1996270-1996769:-1:exon

VDAC3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 419612
gene: VDAC3
product: voltage dependent anion channel 3, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 15 samples with support for all annotated introns
transcript id: XM_032468411.1
SIO_010081: VDAC3
subclass of: SO_0000673
so part of: VDAC3
location: complement(join(1996270..1996769,1997190..1997247,1998132..1998282,1999572..1999799,2000837..2000889,2001886..2002038,2006629..2006697,2008925..2009063))
location: region:1996270-2009063:-1
so has part: feature:2008925-2009063:-1:exon
so has part: feature:2006629-2006697:-1:exon
so has part: feature:2001886-2002038:-1:exon
so has part: feature:2000837-2000889:-1:exon
so has part: feature:1999572-1999799:-1:exon
so has part: feature:1998132-1998282:-1:exon
so has part: feature:1997190-1997247:-1:exon
so has part: feature:1996270-1996769:-1:exon

position:2009063:-1
position: 2009063
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2008925-2009063:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2006629-2006697:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2001886-2002038:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2000837-2000889:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1999572-1999799:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1998132-1998282:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1997190-1997247:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1996270-1996769:-1:exon

VDAC3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 419612
gene: VDAC3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: voltage-dependent anion-selective channel protein 3 isoform X2
translation: MCNTPTYCDLGKAAKDVFNKGYGFGMVKIDLRTKSCSGVEFATSGHAYTDTGKASGNLETKYKICNYGLTFTQKWNTDNTLGTEISLENKLAEGLKLTLDTVFVPNTGKKSGKLKASYKRDCFSLGSNVDIDFSGPTIYGWAVLAFEGWLAGYQMSFDTAKSKLSQNNFALGYKAADFQLHTHVNDGTEFGGSIYQKVNEKIETSINLAWTAGSNNTRFGIAAKYKLDCRTSLSAKVNNASLIGLGYTQTLRPGVKLTLSALIDGKNFNAGGHKVGLGFELEA
SIO_010081: VDAC3
subclass of: SO_0000673
so part of: VDAC3
location: complement(join(1996678..1996769,1997190..1997247,1998132..1998282,1999572..1999799,2000837..2000889,2001886..2002038,2005769..2005818,2006629..2006695))
location: region:1996678-2006695:-1
so has part: feature:2006629-2006695:-1:exon
so has part: feature:2005769-2005818:-1:exon
so has part: feature:2001886-2002038:-1:exon
so has part: feature:2000837-2000889:-1:exon
so has part: feature:1999572-1999799:-1:exon
so has part: feature:1998132-1998282:-1:exon
so has part: feature:1997190-1997247:-1:exon
so has part: feature:1996678-1996769:-1:exon

XP_032324301.1
type: Protein
SIO_000068: ncbiprotein

position:1996678:-1
position: 1996678
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2006695:-1
position: 2006695
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2006629-2006695:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2005769-2005818:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2001886-2002038:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2000837-2000889:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1999572-1999799:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1998132-1998282:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1997190-1997247:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1996678-1996769:-1:exon

VDAC3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 419612
gene: VDAC3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: voltage-dependent anion-selective channel protein 3 isoform X1
translation: MCNTPTYCDLGKAAKDVFNKGYGFGMVKIDLRTKSCSGVMEFATSGHAYTDTGKASGNLETKYKICNYGLTFTQKWNTDNTLGTEISLENKLAEGLKLTLDTVFVPNTGKKSGKLKASYKRDCFSLGSNVDIDFSGPTIYGWAVLAFEGWLAGYQMSFDTAKSKLSQNNFALGYKAADFQLHTHVNDGTEFGGSIYQKVNEKIETSINLAWTAGSNNTRFGIAAKYKLDCRTSLSAKVNNASLIGLGYTQTLRPGVKLTLSALIDGKNFNAGGHKVGLGFELEA
SIO_010081: VDAC3
subclass of: SO_0000673
so part of: VDAC3
location: complement(join(1996678..1996769,1997190..1997247,1998132..1998282,1999572..1999799,2000837..2000889,2001886..2002038,2004631..2004633,2005769..2005818,2006629..2006695))
location: region:1996678-2006695:-1
so has part: feature:2006629-2006695:-1:exon
so has part: feature:2005769-2005818:-1:exon
so has part: feature:2004631-2004633:-1:exon
so has part: feature:2001886-2002038:-1:exon
so has part: feature:2000837-2000889:-1:exon
so has part: feature:1999572-1999799:-1:exon
so has part: feature:1998132-1998282:-1:exon
so has part: feature:1997190-1997247:-1:exon
so has part: feature:1996678-1996769:-1:exon

XP_032324300.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2006629-2006695:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2005769-2005818:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2004631-2004633:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2001886-2002038:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2000837-2000889:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1999572-1999799:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1998132-1998282:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1997190-1997247:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1996678-1996769:-1:exon

VDAC3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 419612
gene: VDAC3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: voltage-dependent anion-selective channel protein 3 isoform X3
translation: MSSTKDMEFATSGHAYTDTGKASGNLETKYKICNYGLTFTQKWNTDNTLGTEISLENKLAEGLKLTLDTVFVPNTGKKSGKLKASYKRDCFSLGSNVDIDFSGPTIYGWAVLAFEGWLAGYQMSFDTAKSKLSQNNFALGYKAADFQLHTHVNDGTEFGGSIYQKVNEKIETSINLAWTAGSNNTRFGIAAKYKLDCRTSLSAKVNNASLIGLGYTQTLRPGVKLTLSALIDGKNFNAGGHKVGLGFELEA
SIO_010081: VDAC3
subclass of: SO_0000673
so part of: VDAC3
location: complement(join(1996678..1996769,1997190..1997247,1998132..1998282,1999572..1999799,2000837..2000889,2001886..2002038,2006629..2006649))
location: region:1996678-2006649:-1
so has part: feature:2006629-2006649:-1:exon
so has part: feature:2001886-2002038:-1:exon
so has part: feature:2000837-2000889:-1:exon
so has part: feature:1999572-1999799:-1:exon
so has part: feature:1998132-1998282:-1:exon
so has part: feature:1997190-1997247:-1:exon
so has part: feature:1996678-1996769:-1:exon

XP_032324302.1
type: Protein
SIO_000068: ncbiprotein

position:2006649:-1
position: 2006649
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2006629-2006649:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2001886-2002038:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2000837-2000889:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1999572-1999799:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1998132-1998282:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1997190-1997247:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1996678-1996769:-1:exon

DKK4
type: Gene
subclass of: SO_0000704
RO_0002162: 419612
gene: DKK4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2018575..2022426
location: region:2018575-2022426:1
so has part: feature:2018575-2022426:1:exon
subclass of: SO_0000010

102508785
type: Gene
SIO_000068: ncbigene

position:2018575:1
position: 2018575
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2022426:1
position: 2022426
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2018575-2022426:1:exon

DKK4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 419612
gene: DKK4
product: dickkopf WNT signaling pathway inhibitor 4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_006188388.2
SIO_010081: DKK4
subclass of: SO_0000673
so part of: DKK4
location: join(2018575..2019075,2020120..2020270,2020791..2020943,2021827..2022426)
location: region:2018575-2022426:1
so has part: feature:2018575-2019075:1:exon
so has part: feature:2020120-2020270:1:exon
so has part: feature:2020791-2020943:1:exon
so has part: feature:2021827-2022426:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2018575-2019075:1:exon

position:2019075:1
position: 2019075
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2020120-2020270:1:exon

position:2020120:1
position: 2020120
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2020270:1
position: 2020270
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2020791-2020943:1:exon

position:2020791:1
position: 2020791
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2020943:1
position: 2020943
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2021827-2022426:1:exon

position:2021827:1
position: 2021827
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

DKK4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 419612
gene: DKK4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: dickkopf-related protein 4
translation: MVAVVLLGLGWLCAPLGALVLDFNNIKSSADAQGARKGSQCLSDKDCSTRKFCLRPQDEKPFCATCRGLRRRCQRDAMCCPGSLCVNDVCTAMEDATLILERQTDDQDDLDTKGTTEHPTRENKPKRKPNIKNSQDSKGQEGGSCLRTSDCGPGLCCARHFWTKICKPVLLEGQVCSRRGHKEPAQAPEIFQRCDCGPGLSCRSPGAGTRQSARLRVCQKI
SIO_010081: DKK4
subclass of: SO_0000673
so part of: DKK4
location: join(2018965..2019075,2020120..2020270,2020791..2020943,2021827..2022077)
location: region:2018965-2022077:1
so has part: feature:2018965-2019075:1:exon
so has part: feature:2020120-2020270:1:exon
so has part: feature:2020791-2020943:1:exon
so has part: feature:2021827-2022077:1:exon

XP_006188450.2
type: Protein
SIO_000068: ncbiprotein

position:2018965:1
position: 2018965
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2022077:1
position: 2022077
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2018965-2019075:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2020120-2020270:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2020791-2020943:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2021827-2022077:1:exon

LOC116659991
type: Gene
subclass of: SO_0000704
RO_0002162: 419612
gene: LOC116659991
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2021035..2023059)
location: region:2021035-2023059:-1
so has part: feature:2021035-2023059:-1:exon
subclass of: SO_0000011

116659991
type: Gene
SIO_000068: ncbigene

position:2021035:-1
position: 2021035
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2023059:-1
position: 2023059
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2021035-2023059:-1:exon

LOC116659991
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 419612
nc RNA class: lncRNA
gene: LOC116659991
product: uncharacterized LOC116659991
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XR_004315327.1
SIO_010081: LOC116659991
subclass of: SO_0000673
so part of: LOC116659991
location: complement(join(2021035..2021274,2021869..2021873,2023048..2023059))
location: region:2021035-2023059:-1
so has part: feature:2023048-2023059:-1:exon
so has part: feature:2021869-2021873:-1:exon
so has part: feature:2021035-2021274:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2023048-2023059:-1:exon

position:2023048:-1
position: 2023048
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2021869-2021873:-1:exon

position:2021869:-1
position: 2021869
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2021873:-1
position: 2021873
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2021035-2021274:-1:exon

position:2021274:-1
position: 2021274
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

POLB
type: Gene
subclass of: SO_0000704
RO_0002162: 419612
gene: POLB
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2023233..2044893)
location: region:2023233-2044893:-1
so has part: feature:2023233-2044893:-1:exon
subclass of: SO_0000010

102508539
type: Gene
SIO_000068: ncbigene

position:2023233:-1
position: 2023233
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2044893:-1
position: 2044893
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2023233-2044893:-1:exon

POLB
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 419612
gene: POLB
product: DNA polymerase beta
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 Proteins, and 95% coverage of the annotated genomic feature by RNAseq alignments, including 42 samples with support for all annotated introns
transcript id: XM_032468688.1
SIO_010081: POLB
subclass of: SO_0000673
so part of: POLB
location: complement(join(2023233..2023475,2024484..2024624,2025083..2025147,2030757..2030843,2031485..2031555,2032681..2032753,2032851..2032905,2034439..2034490,2036291..2036340,2037737..2037795,2038401..2038475,2041861..2041927,2044333..2044390,2044661..2044893))
location: region:2023233-2044893:-1
so has part: feature:2044661-2044893:-1:exon
so has part: feature:2044333-2044390:-1:exon
so has part: feature:2041861-2041927:-1:exon
so has part: feature:2038401-2038475:-1:exon
so has part: feature:2037737-2037795:-1:exon
so has part: feature:2036291-2036340:-1:exon
so has part: feature:2034439-2034490:-1:exon
so has part: feature:2032851-2032905:-1:exon
so has part: feature:2032681-2032753:-1:exon
so has part: feature:2031485-2031555:-1:exon
so has part: feature:2030757-2030843:-1:exon
so has part: feature:2025083-2025147:-1:exon
so has part: feature:2024484-2024624:-1:exon
so has part: feature:2023233-2023475:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2044661-2044893:-1:exon

position:2044661:-1
position: 2044661
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2044333-2044390:-1:exon

position:2044333:-1
position: 2044333
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2044390:-1
position: 2044390
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2041861-2041927:-1:exon

position:2041861:-1
position: 2041861
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2041927:-1
position: 2041927
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2038401-2038475:-1:exon

position:2038401:-1
position: 2038401
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2038475:-1
position: 2038475
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2037737-2037795:-1:exon

position:2037737:-1
position: 2037737
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2037795:-1
position: 2037795
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2036291-2036340:-1:exon

position:2036291:-1
position: 2036291
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2036340:-1
position: 2036340
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:2034439-2034490:-1:exon

position:2034439:-1
position: 2034439
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2034490:-1
position: 2034490
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:2032851-2032905:-1:exon

position:2032851:-1
position: 2032851
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2032905:-1
position: 2032905
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:2032681-2032753:-1:exon

position:2032681:-1
position: 2032681
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2032753:-1
position: 2032753
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:2031485-2031555:-1:exon

position:2031485:-1
position: 2031485
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2031555:-1
position: 2031555
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:2030757-2030843:-1:exon

position:2030757:-1
position: 2030757
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2030843:-1
position: 2030843
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:2025083-2025147:-1:exon

position:2025083:-1
position: 2025083
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2025147:-1
position: 2025147
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:2024484-2024624:-1:exon

position:2024484:-1
position: 2024484
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2024624:-1
position: 2024624
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:2023233-2023475:-1:exon

position:2023475:-1
position: 2023475
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

POLB
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 419612
gene: POLB
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: DNA polymerase beta
translation: MSKRKAPQETLNGGITDMLTELANFEKNVNQAIHKYNAYRKAASVIAKYPQKIKSGAEAKKLPGVGTKIAEKIDEFLATGKLRKLEKIRQDDTSSSINFLTRVSGIGPSAARKFVDEGIKTLEDLRKNEDKLNHHQRIGLKYFEDFEKRIPREEMLQMQDIVLNEVKKVDSEYIATVCGSFRRGAESSGDMDVLLTHPSFTSESAKQPKLLHRVVEQLQKVHFITDTLSKGETKFMGVCQLPGKNDEKAYPHRRIDIRLIPKDQYYCGVLYFTGSDIFNKNMRAHALEKGFTINEYTIRPLGVTGVAGEPLPVDSEKDIFDYIQWKYREPKDRSE
SIO_010081: POLB
subclass of: SO_0000673
so part of: POLB
location: complement(join(2023381..2023475,2024484..2024624,2025083..2025147,2030757..2030843,2031485..2031555,2032681..2032753,2032851..2032905,2034439..2034490,2036291..2036340,2037737..2037795,2038401..2038475,2041861..2041927,2044333..2044390,2044661..2044721))
location: region:2023381-2044721:-1
so has part: feature:2044661-2044721:-1:exon
so has part: feature:2044333-2044390:-1:exon
so has part: feature:2041861-2041927:-1:exon
so has part: feature:2038401-2038475:-1:exon
so has part: feature:2037737-2037795:-1:exon
so has part: feature:2036291-2036340:-1:exon
so has part: feature:2034439-2034490:-1:exon
so has part: feature:2032851-2032905:-1:exon
so has part: feature:2032681-2032753:-1:exon
so has part: feature:2031485-2031555:-1:exon
so has part: feature:2030757-2030843:-1:exon
so has part: feature:2025083-2025147:-1:exon
so has part: feature:2024484-2024624:-1:exon
so has part: feature:2023381-2023475:-1:exon

XP_032324579.1
type: Protein
SIO_000068: ncbiprotein

position:2023381:-1
position: 2023381
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2044721:-1
position: 2044721
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2044661-2044721:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2044333-2044390:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2041861-2041927:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2038401-2038475:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2037737-2037795:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2036291-2036340:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2034439-2034490:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2032851-2032905:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2032681-2032753:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2031485-2031555:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2030757-2030843:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2025083-2025147:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2024484-2024624:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2023381-2023475:-1:exon

IKBKB
type: Gene
subclass of: SO_0000704
RO_0002162: 419612
gene: IKBKB
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2055869..2102856)
location: region:2055869-2102856:-1
so has part: feature:2055869-2102856:-1:exon
subclass of: SO_0000010

102508142
type: Gene
SIO_000068: ncbigene

position:2055869:-1
position: 2055869
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2102856:-1
position: 2102856
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2055869-2102856:-1:exon

IKBKB
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 419612
gene: IKBKB
product: inhibitor of nuclear factor kappa B kinase subunit beta, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 mRNAs, 19 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 38 samples with support for all annotated introns
transcript id: XM_032468686.1
SIO_010081: IKBKB
subclass of: SO_0000673
so part of: IKBKB
location: complement(join(2055869..2057233,2058297..2058387,2060545..2060666,2063053..2063200,2063373..2063472,2063560..2063609,2064696..2064805,2066268..2066329,2066488..2066639,2067158..2067281,2068065..2068179,2068765..2068959,2069243..2069372,2070541..2070648,2074322..2074446,2076494..2076583,2077550..2077638,2088356..2088425,2090878..2090995,2091847..2091941,2101945..2102070))
location: region:2055869-2102070:-1
so has part: feature:2101945-2102070:-1:exon
so has part: feature:2091847-2091941:-1:exon
so has part: feature:2090878-2090995:-1:exon
so has part: feature:2088356-2088425:-1:exon
so has part: feature:2077550-2077638:-1:exon
so has part: feature:2076494-2076583:-1:exon
so has part: feature:2074322-2074446:-1:exon
so has part: feature:2070541-2070648:-1:exon
so has part: feature:2069243-2069372:-1:exon
so has part: feature:2068765-2068959:-1:exon
so has part: feature:2068065-2068179:-1:exon
so has part: feature:2067158-2067281:-1:exon
so has part: feature:2066488-2066639:-1:exon
so has part: feature:2066268-2066329:-1:exon
so has part: feature:2064696-2064805:-1:exon
so has part: feature:2063560-2063609:-1:exon
so has part: feature:2063373-2063472:-1:exon
so has part: feature:2063053-2063200:-1:exon
so has part: feature:2060545-2060666:-1:exon
so has part: feature:2058297-2058387:-1:exon
so has part: feature:2055869-2057233:-1:exon

position:2102070:-1
position: 2102070
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2101945-2102070:-1:exon

position:2101945:-1
position: 2101945
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2091847-2091941:-1:exon

position:2091847:-1
position: 2091847
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2091941:-1
position: 2091941
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2090878-2090995:-1:exon

position:2090878:-1
position: 2090878
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2090995:-1
position: 2090995
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2088356-2088425:-1:exon

position:2088356:-1
position: 2088356
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2088425:-1
position: 2088425
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2077550-2077638:-1:exon

position:2077550:-1
position: 2077550
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2077638:-1
position: 2077638
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2076494-2076583:-1:exon

position:2076494:-1
position: 2076494
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2076583:-1
position: 2076583
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:2074322-2074446:-1:exon

position:2074322:-1
position: 2074322
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2074446:-1
position: 2074446
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:2070541-2070648:-1:exon

position:2070541:-1
position: 2070541
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2070648:-1
position: 2070648
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:2069243-2069372:-1:exon

position:2069243:-1
position: 2069243
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2069372:-1
position: 2069372
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:2068765-2068959:-1:exon

position:2068765:-1
position: 2068765
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2068959:-1
position: 2068959
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:2068065-2068179:-1:exon

position:2068065:-1
position: 2068065
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2068179:-1
position: 2068179
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:2067158-2067281:-1:exon

position:2067158:-1
position: 2067158
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2067281:-1
position: 2067281
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:2066488-2066639:-1:exon

position:2066488:-1
position: 2066488
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2066639:-1
position: 2066639
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:2066268-2066329:-1:exon

position:2066268:-1
position: 2066268
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2066329:-1
position: 2066329
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:2064696-2064805:-1:exon

position:2064696:-1
position: 2064696
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2064805:-1
position: 2064805
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:2063560-2063609:-1:exon

position:2063560:-1
position: 2063560
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2063609:-1
position: 2063609
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:2063373-2063472:-1:exon

position:2063373:-1
position: 2063373
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2063472:-1
position: 2063472
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:2063053-2063200:-1:exon

position:2063053:-1
position: 2063053
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2063200:-1
position: 2063200
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:2060545-2060666:-1:exon

position:2060545:-1
position: 2060545
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2060666:-1
position: 2060666
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:2058297-2058387:-1:exon

position:2058297:-1
position: 2058297
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2058387:-1
position: 2058387
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:2055869-2057233:-1:exon

position:2057233:-1
position: 2057233
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

IKBKB
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 419612
gene: IKBKB
product: inhibitor of nuclear factor kappa B kinase subunit beta, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 mRNAs, 19 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 12 samples with support for all annotated introns
transcript id: XM_032468687.1
SIO_010081: IKBKB
subclass of: SO_0000673
so part of: IKBKB
location: complement(join(2057129..2057233,2058297..2058387,2060545..2060666,2063053..2063200,2063373..2063472,2063560..2063609,2064696..2064805,2066268..2066329,2066488..2066639,2067158..2067281,2068065..2068179,2068765..2068959,2069243..2069372,2070541..2070648,2074322..2074446,2076494..2076583,2077550..2077638,2088356..2088425,2090878..2090995,2091847..2091941,2101945..2102082,2102371..2102379,2102627..2102856))
location: region:2057129-2102856:-1
so has part: feature:2102627-2102856:-1:exon
so has part: feature:2102371-2102379:-1:exon
so has part: feature:2101945-2102082:-1:exon
so has part: feature:2091847-2091941:-1:exon
so has part: feature:2090878-2090995:-1:exon
so has part: feature:2088356-2088425:-1:exon
so has part: feature:2077550-2077638:-1:exon
so has part: feature:2076494-2076583:-1:exon
so has part: feature:2074322-2074446:-1:exon
so has part: feature:2070541-2070648:-1:exon
so has part: feature:2069243-2069372:-1:exon
so has part: feature:2068765-2068959:-1:exon
so has part: feature:2068065-2068179:-1:exon
so has part: feature:2067158-2067281:-1:exon
so has part: feature:2066488-2066639:-1:exon
so has part: feature:2066268-2066329:-1:exon
so has part: feature:2064696-2064805:-1:exon
so has part: feature:2063560-2063609:-1:exon
so has part: feature:2063373-2063472:-1:exon
so has part: feature:2063053-2063200:-1:exon
so has part: feature:2060545-2060666:-1:exon
so has part: feature:2058297-2058387:-1:exon
so has part: feature:2057129-2057233:-1:exon

position:2057129:-1
position: 2057129
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2102627-2102856:-1:exon

position:2102627:-1
position: 2102627
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2102371-2102379:-1:exon

position:2102371:-1
position: 2102371
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2102379:-1
position: 2102379
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2101945-2102082:-1:exon

position:2102082:-1
position: 2102082
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2091847-2091941:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2090878-2090995:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2088356-2088425:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2077550-2077638:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2076494-2076583:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2074322-2074446:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2070541-2070648:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2069243-2069372:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2068765-2068959:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2068065-2068179:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2067158-2067281:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2066488-2066639:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2066268-2066329:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:2064696-2064805:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:2063560-2063609:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:2063373-2063472:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:2063053-2063200:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:2060545-2060666:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:2058297-2058387:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:2057129-2057233:-1:exon

IKBKB
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 419612
gene: IKBKB
product: inhibitor of nuclear factor kappa B kinase subunit beta, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 mRNAs, 19 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 38 samples with support for all annotated introns
transcript id: XM_032468685.1
SIO_010081: IKBKB
subclass of: SO_0000673
so part of: IKBKB
location: complement(join(2057129..2057233,2058297..2058387,2060545..2060666,2063053..2063200,2063373..2063472,2063560..2063609,2064696..2064805,2066268..2066329,2066488..2066639,2067158..2067281,2068065..2068179,2068765..2068959,2069243..2069372,2070541..2070648,2074322..2074446,2076494..2076583,2077550..2077638,2088356..2088425,2090878..2090995,2091847..2091941,2101945..2102078,2102627..2102855))
location: region:2057129-2102855:-1
so has part: feature:2102627-2102855:-1:exon
so has part: feature:2101945-2102078:-1:exon
so has part: feature:2091847-2091941:-1:exon
so has part: feature:2090878-2090995:-1:exon
so has part: feature:2088356-2088425:-1:exon
so has part: feature:2077550-2077638:-1:exon
so has part: feature:2076494-2076583:-1:exon
so has part: feature:2074322-2074446:-1:exon
so has part: feature:2070541-2070648:-1:exon
so has part: feature:2069243-2069372:-1:exon
so has part: feature:2068765-2068959:-1:exon
so has part: feature:2068065-2068179:-1:exon
so has part: feature:2067158-2067281:-1:exon
so has part: feature:2066488-2066639:-1:exon
so has part: feature:2066268-2066329:-1:exon
so has part: feature:2064696-2064805:-1:exon
so has part: feature:2063560-2063609:-1:exon
so has part: feature:2063373-2063472:-1:exon
so has part: feature:2063053-2063200:-1:exon
so has part: feature:2060545-2060666:-1:exon
so has part: feature:2058297-2058387:-1:exon
so has part: feature:2057129-2057233:-1:exon

position:2102855:-1
position: 2102855
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2102627-2102855:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2101945-2102078:-1:exon

position:2102078:-1
position: 2102078
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2091847-2091941:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2090878-2090995:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2088356-2088425:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2077550-2077638:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2076494-2076583:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2074322-2074446:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2070541-2070648:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2069243-2069372:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2068765-2068959:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2068065-2068179:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2067158-2067281:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2066488-2066639:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2066268-2066329:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2064696-2064805:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:2063560-2063609:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:2063373-2063472:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:2063053-2063200:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:2060545-2060666:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:2058297-2058387:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:2057129-2057233:-1:exon

IKBKB
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 419612
gene: IKBKB
product: inhibitor of nuclear factor kappa B kinase subunit beta, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 mRNAs, 19 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 13 samples with support for all annotated introns
transcript id: XM_006188385.3
SIO_010081: IKBKB
subclass of: SO_0000673
so part of: IKBKB
location: complement(join(2057129..2057233,2058297..2058387,2060545..2060666,2063053..2063200,2063373..2063472,2063560..2063609,2064696..2064805,2066268..2066329,2066488..2066639,2067158..2067281,2068065..2068179,2068765..2068959,2069243..2069372,2070541..2070648,2074322..2074446,2076494..2076583,2077550..2077638,2088356..2088425,2090878..2090995,2091847..2091941,2101945..2102078,2102265..2102364))
location: region:2057129-2102364:-1
so has part: feature:2102265-2102364:-1:exon
so has part: feature:2101945-2102078:-1:exon
so has part: feature:2091847-2091941:-1:exon
so has part: feature:2090878-2090995:-1:exon
so has part: feature:2088356-2088425:-1:exon
so has part: feature:2077550-2077638:-1:exon
so has part: feature:2076494-2076583:-1:exon
so has part: feature:2074322-2074446:-1:exon
so has part: feature:2070541-2070648:-1:exon
so has part: feature:2069243-2069372:-1:exon
so has part: feature:2068765-2068959:-1:exon
so has part: feature:2068065-2068179:-1:exon
so has part: feature:2067158-2067281:-1:exon
so has part: feature:2066488-2066639:-1:exon
so has part: feature:2066268-2066329:-1:exon
so has part: feature:2064696-2064805:-1:exon
so has part: feature:2063560-2063609:-1:exon
so has part: feature:2063373-2063472:-1:exon
so has part: feature:2063053-2063200:-1:exon
so has part: feature:2060545-2060666:-1:exon
so has part: feature:2058297-2058387:-1:exon
so has part: feature:2057129-2057233:-1:exon

position:2102364:-1
position: 2102364
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2102265-2102364:-1:exon

position:2102265:-1
position: 2102265
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2101945-2102078:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2091847-2091941:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2090878-2090995:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2088356-2088425:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2077550-2077638:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2076494-2076583:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2074322-2074446:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2070541-2070648:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2069243-2069372:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2068765-2068959:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2068065-2068179:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2067158-2067281:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2066488-2066639:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2066268-2066329:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2064696-2064805:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:2063560-2063609:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:2063373-2063472:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:2063053-2063200:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:2060545-2060666:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:2058297-2058387:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:2057129-2057233:-1:exon

IKBKB
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 419612
gene: IKBKB
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: inhibitor of nuclear factor kappa-B kinase subunit beta
translation: MSWSPSLPTQTCGAWEMKERLGTGGFGNVIRWHNQETGEQIAIKQCRQELSPRNRERWCLEIQIMRRLNHPNVVAARDVPEGMQSLAPNDLPLLAMEYCQGGDLRKYLNQFENCCGLREGAILTLLSDIASALRYLHENRIIHRDLKPENIVLQQGEQRLIHKIIDLGYAKELDQGSLCTSFVGTLQYLAPELLEQQKYTVTVDYWSFGTLAFECITGFRPFLPNWQPVQWHSKVRQKSETDIVVSEDLNGTVKFSSSLPYPNNLNSILAQRLEKWLQLMLTWHPRQRGTDPVYGPNGCFKALDDILNLKLAHVLNMVTGTIHTYPVTEDESLQSLKARIQEDTGIAEEDQELLQEAGLALIPDKPAAQCISDGKLNEGRTLDMDLVFLFDNSRVTYETQVSPRPQPESVSCILQEPKRNLPFFQLRRVWGQVWHSIQALKEDCSRLQQGQRAAMMNLLRNNSCLSKMKNSMASMSQQLKAKLDFFKTSIQIDLEKYNEQTEFGITSDKLQLAWREMEQAVELCGRENEVKHLVERMMALQTDIVDLQRSPMGRKQGGTLDDLEEQARELYRRLREKPRDQRTDGDSQEMVRLLLQAIQGFEKKVRVIYTQLSKTVVCKQKALELLPKVEEVVSLMNEDEKMVVRLQEKRQKELWNLLKIACSKVRGPVSGSPDSMNASRLSHPGQLMSQPCTAPDSEAVKKSEELVAEAHTLCTQLENALQDTMKEQDQSLRSLDWSWLQTAEEEQNGLEQAS
SIO_010081: IKBKB
subclass of: SO_0000673
so part of: IKBKB
location: complement(join(2057168..2057233,2058297..2058387,2060545..2060666,2063053..2063200,2063373..2063472,2063560..2063609,2064696..2064805,2066268..2066329,2066488..2066639,2067158..2067281,2068065..2068179,2068765..2068959,2069243..2069372,2070541..2070648,2074322..2074446,2076494..2076583,2077550..2077638,2088356..2088425,2090878..2090995,2091847..2091941,2101945..2102049))
location: region:2057168-2102049:-1
so has part: feature:2101945-2102049:-1:exon
so has part: feature:2091847-2091941:-1:exon
so has part: feature:2090878-2090995:-1:exon
so has part: feature:2088356-2088425:-1:exon
so has part: feature:2077550-2077638:-1:exon
so has part: feature:2076494-2076583:-1:exon
so has part: feature:2074322-2074446:-1:exon
so has part: feature:2070541-2070648:-1:exon
so has part: feature:2069243-2069372:-1:exon
so has part: feature:2068765-2068959:-1:exon
so has part: feature:2068065-2068179:-1:exon
so has part: feature:2067158-2067281:-1:exon
so has part: feature:2066488-2066639:-1:exon
so has part: feature:2066268-2066329:-1:exon
so has part: feature:2064696-2064805:-1:exon
so has part: feature:2063560-2063609:-1:exon
so has part: feature:2063373-2063472:-1:exon
so has part: feature:2063053-2063200:-1:exon
so has part: feature:2060545-2060666:-1:exon
so has part: feature:2058297-2058387:-1:exon
so has part: feature:2057168-2057233:-1:exon

XP_032324576.1
type: Protein
SIO_000068: ncbiprotein

position:2057168:-1
position: 2057168
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2102049:-1
position: 2102049
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2101945-2102049:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2091847-2091941:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2090878-2090995:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2088356-2088425:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2077550-2077638:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2076494-2076583:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2074322-2074446:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2070541-2070648:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2069243-2069372:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2068765-2068959:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2068065-2068179:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2067158-2067281:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2066488-2066639:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2066268-2066329:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2064696-2064805:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2063560-2063609:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:2063373-2063472:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:2063053-2063200:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:2060545-2060666:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:2058297-2058387:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:2057168-2057233:-1:exon

IKBKB
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 419612
gene: IKBKB
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: inhibitor of nuclear factor kappa-B kinase subunit beta
translation: MSWSPSLPTQTCGAWEMKERLGTGGFGNVIRWHNQETGEQIAIKQCRQELSPRNRERWCLEIQIMRRLNHPNVVAARDVPEGMQSLAPNDLPLLAMEYCQGGDLRKYLNQFENCCGLREGAILTLLSDIASALRYLHENRIIHRDLKPENIVLQQGEQRLIHKIIDLGYAKELDQGSLCTSFVGTLQYLAPELLEQQKYTVTVDYWSFGTLAFECITGFRPFLPNWQPVQWHSKVRQKSETDIVVSEDLNGTVKFSSSLPYPNNLNSILAQRLEKWLQLMLTWHPRQRGTDPVYGPNGCFKALDDILNLKLAHVLNMVTGTIHTYPVTEDESLQSLKARIQEDTGIAEEDQELLQEAGLALIPDKPAAQCISDGKLNEGRTLDMDLVFLFDNSRVTYETQVSPRPQPESVSCILQEPKRNLPFFQLRRVWGQVWHSIQALKEDCSRLQQGQRAAMMNLLRNNSCLSKMKNSMASMSQQLKAKLDFFKTSIQIDLEKYNEQTEFGITSDKLQLAWREMEQAVELCGRENEVKHLVERMMALQTDIVDLQRSPMGRKQGGTLDDLEEQARELYRRLREKPRDQRTDGDSQEMVRLLLQAIQGFEKKVRVIYTQLSKTVVCKQKALELLPKVEEVVSLMNEDEKMVVRLQEKRQKELWNLLKIACSKVRGPVSGSPDSMNASRLSHPGQLMSQPCTAPDSEAVKKSEELVAEAHTLCTQLENALQDTMKEQDQSLRSLDWSWLQTAEEEQNGLEQAS
SIO_010081: IKBKB
subclass of: SO_0000673
so part of: IKBKB
location: complement(join(2057168..2057233,2058297..2058387,2060545..2060666,2063053..2063200,2063373..2063472,2063560..2063609,2064696..2064805,2066268..2066329,2066488..2066639,2067158..2067281,2068065..2068179,2068765..2068959,2069243..2069372,2070541..2070648,2074322..2074446,2076494..2076583,2077550..2077638,2088356..2088425,2090878..2090995,2091847..2091941,2101945..2102049))
location: region:2057168-2102049:-1
so has part: feature:2101945-2102049:-1:exon
so has part: feature:2091847-2091941:-1:exon
so has part: feature:2090878-2090995:-1:exon
so has part: feature:2088356-2088425:-1:exon
so has part: feature:2077550-2077638:-1:exon
so has part: feature:2076494-2076583:-1:exon
so has part: feature:2074322-2074446:-1:exon
so has part: feature:2070541-2070648:-1:exon
so has part: feature:2069243-2069372:-1:exon
so has part: feature:2068765-2068959:-1:exon
so has part: feature:2068065-2068179:-1:exon
so has part: feature:2067158-2067281:-1:exon
so has part: feature:2066488-2066639:-1:exon
so has part: feature:2066268-2066329:-1:exon
so has part: feature:2064696-2064805:-1:exon
so has part: feature:2063560-2063609:-1:exon
so has part: feature:2063373-2063472:-1:exon
so has part: feature:2063053-2063200:-1:exon
so has part: feature:2060545-2060666:-1:exon
so has part: feature:2058297-2058387:-1:exon
so has part: feature:2057168-2057233:-1:exon

XP_032324577.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2101945-2102049:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2091847-2091941:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2090878-2090995:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2088356-2088425:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2077550-2077638:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2076494-2076583:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2074322-2074446:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2070541-2070648:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2069243-2069372:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2068765-2068959:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2068065-2068179:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2067158-2067281:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2066488-2066639:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2066268-2066329:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2064696-2064805:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2063560-2063609:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:2063373-2063472:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:2063053-2063200:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:2060545-2060666:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:2058297-2058387:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:2057168-2057233:-1:exon

IKBKB
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 419612
gene: IKBKB
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: inhibitor of nuclear factor kappa-B kinase subunit beta
translation: MSWSPSLPTQTCGAWEMKERLGTGGFGNVIRWHNQETGEQIAIKQCRQELSPRNRERWCLEIQIMRRLNHPNVVAARDVPEGMQSLAPNDLPLLAMEYCQGGDLRKYLNQFENCCGLREGAILTLLSDIASALRYLHENRIIHRDLKPENIVLQQGEQRLIHKIIDLGYAKELDQGSLCTSFVGTLQYLAPELLEQQKYTVTVDYWSFGTLAFECITGFRPFLPNWQPVQWHSKVRQKSETDIVVSEDLNGTVKFSSSLPYPNNLNSILAQRLEKWLQLMLTWHPRQRGTDPVYGPNGCFKALDDILNLKLAHVLNMVTGTIHTYPVTEDESLQSLKARIQEDTGIAEEDQELLQEAGLALIPDKPAAQCISDGKLNEGRTLDMDLVFLFDNSRVTYETQVSPRPQPESVSCILQEPKRNLPFFQLRRVWGQVWHSIQALKEDCSRLQQGQRAAMMNLLRNNSCLSKMKNSMASMSQQLKAKLDFFKTSIQIDLEKYNEQTEFGITSDKLQLAWREMEQAVELCGRENEVKHLVERMMALQTDIVDLQRSPMGRKQGGTLDDLEEQARELYRRLREKPRDQRTDGDSQEMVRLLLQAIQGFEKKVRVIYTQLSKTVVCKQKALELLPKVEEVVSLMNEDEKMVVRLQEKRQKELWNLLKIACSKVRGPVSGSPDSMNASRLSHPGQLMSQPCTAPDSEAVKKSEELVAEAHTLCTQLENALQDTMKEQDQSLRSLDWSWLQTAEEEQNGLEQAS
SIO_010081: IKBKB
subclass of: SO_0000673
so part of: IKBKB
location: complement(join(2057168..2057233,2058297..2058387,2060545..2060666,2063053..2063200,2063373..2063472,2063560..2063609,2064696..2064805,2066268..2066329,2066488..2066639,2067158..2067281,2068065..2068179,2068765..2068959,2069243..2069372,2070541..2070648,2074322..2074446,2076494..2076583,2077550..2077638,2088356..2088425,2090878..2090995,2091847..2091941,2101945..2102049))
location: region:2057168-2102049:-1
so has part: feature:2101945-2102049:-1:exon
so has part: feature:2091847-2091941:-1:exon
so has part: feature:2090878-2090995:-1:exon
so has part: feature:2088356-2088425:-1:exon
so has part: feature:2077550-2077638:-1:exon
so has part: feature:2076494-2076583:-1:exon
so has part: feature:2074322-2074446:-1:exon
so has part: feature:2070541-2070648:-1:exon
so has part: feature:2069243-2069372:-1:exon
so has part: feature:2068765-2068959:-1:exon
so has part: feature:2068065-2068179:-1:exon
so has part: feature:2067158-2067281:-1:exon
so has part: feature:2066488-2066639:-1:exon
so has part: feature:2066268-2066329:-1:exon
so has part: feature:2064696-2064805:-1:exon
so has part: feature:2063560-2063609:-1:exon
so has part: feature:2063373-2063472:-1:exon
so has part: feature:2063053-2063200:-1:exon
so has part: feature:2060545-2060666:-1:exon
so has part: feature:2058297-2058387:-1:exon
so has part: feature:2057168-2057233:-1:exon

XP_032324578.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2101945-2102049:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2091847-2091941:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2090878-2090995:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2088356-2088425:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2077550-2077638:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2076494-2076583:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2074322-2074446:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2070541-2070648:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2069243-2069372:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2068765-2068959:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2068065-2068179:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2067158-2067281:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2066488-2066639:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2066268-2066329:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2064696-2064805:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2063560-2063609:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:2063373-2063472:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:2063053-2063200:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:2060545-2060666:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:2058297-2058387:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:2057168-2057233:-1:exon

IKBKB
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 419612
gene: IKBKB
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: inhibitor of nuclear factor kappa-B kinase subunit beta
translation: MSWSPSLPTQTCGAWEMKERLGTGGFGNVIRWHNQETGEQIAIKQCRQELSPRNRERWCLEIQIMRRLNHPNVVAARDVPEGMQSLAPNDLPLLAMEYCQGGDLRKYLNQFENCCGLREGAILTLLSDIASALRYLHENRIIHRDLKPENIVLQQGEQRLIHKIIDLGYAKELDQGSLCTSFVGTLQYLAPELLEQQKYTVTVDYWSFGTLAFECITGFRPFLPNWQPVQWHSKVRQKSETDIVVSEDLNGTVKFSSSLPYPNNLNSILAQRLEKWLQLMLTWHPRQRGTDPVYGPNGCFKALDDILNLKLAHVLNMVTGTIHTYPVTEDESLQSLKARIQEDTGIAEEDQELLQEAGLALIPDKPAAQCISDGKLNEGRTLDMDLVFLFDNSRVTYETQVSPRPQPESVSCILQEPKRNLPFFQLRRVWGQVWHSIQALKEDCSRLQQGQRAAMMNLLRNNSCLSKMKNSMASMSQQLKAKLDFFKTSIQIDLEKYNEQTEFGITSDKLQLAWREMEQAVELCGRENEVKHLVERMMALQTDIVDLQRSPMGRKQGGTLDDLEEQARELYRRLREKPRDQRTDGDSQEMVRLLLQAIQGFEKKVRVIYTQLSKTVVCKQKALELLPKVEEVVSLMNEDEKMVVRLQEKRQKELWNLLKIACSKVRGPVSGSPDSMNASRLSHPGQLMSQPCTAPDSEAVKKSEELVAEAHTLCTQLENALQDTMKEQDQSLRSLDWSWLQTAEEEQNGLEQAS
SIO_010081: IKBKB
subclass of: SO_0000673
so part of: IKBKB
location: complement(join(2057168..2057233,2058297..2058387,2060545..2060666,2063053..2063200,2063373..2063472,2063560..2063609,2064696..2064805,2066268..2066329,2066488..2066639,2067158..2067281,2068065..2068179,2068765..2068959,2069243..2069372,2070541..2070648,2074322..2074446,2076494..2076583,2077550..2077638,2088356..2088425,2090878..2090995,2091847..2091941,2101945..2102049))
location: region:2057168-2102049:-1
so has part: feature:2101945-2102049:-1:exon
so has part: feature:2091847-2091941:-1:exon
so has part: feature:2090878-2090995:-1:exon
so has part: feature:2088356-2088425:-1:exon
so has part: feature:2077550-2077638:-1:exon
so has part: feature:2076494-2076583:-1:exon
so has part: feature:2074322-2074446:-1:exon
so has part: feature:2070541-2070648:-1:exon
so has part: feature:2069243-2069372:-1:exon
so has part: feature:2068765-2068959:-1:exon
so has part: feature:2068065-2068179:-1:exon
so has part: feature:2067158-2067281:-1:exon
so has part: feature:2066488-2066639:-1:exon
so has part: feature:2066268-2066329:-1:exon
so has part: feature:2064696-2064805:-1:exon
so has part: feature:2063560-2063609:-1:exon
so has part: feature:2063373-2063472:-1:exon
so has part: feature:2063053-2063200:-1:exon
so has part: feature:2060545-2060666:-1:exon
so has part: feature:2058297-2058387:-1:exon
so has part: feature:2057168-2057233:-1:exon

XP_006188447.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2101945-2102049:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2091847-2091941:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2090878-2090995:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2088356-2088425:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2077550-2077638:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2076494-2076583:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2074322-2074446:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2070541-2070648:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2069243-2069372:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2068765-2068959:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2068065-2068179:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2067158-2067281:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2066488-2066639:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2066268-2066329:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2064696-2064805:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2063560-2063609:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:2063373-2063472:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:2063053-2063200:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:2060545-2060666:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:2058297-2058387:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:2057168-2057233:-1:exon

PLAT
type: Gene
subclass of: SO_0000704
RO_0002162: 419612
gene: PLAT
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2139132..2163445
location: region:2139132-2163445:1
so has part: feature:2139132-2163445:1:exon
subclass of: SO_0000010

102507711
type: Gene
SIO_000068: ncbigene

position:2139132:1
position: 2139132
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2163445:1
position: 2163445
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2139132-2163445:1:exon

PLAT
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 419612
gene: PLAT
product: plasminogen activator, tissue type
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 16 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 46 samples with support for all annotated introns
transcript id: XM_006188383.3
SIO_010081: PLAT
subclass of: SO_0000673
so part of: PLAT
location: join(2139132..2139328,2149864..2149961,2150687..2150726,2152102..2152239,2153293..2153403,2153767..2153941,2154596..2154687,2155876..2156050,2157356..2157441,2158731..2158926,2159020..2159156,2159476..2159616,2160579..2160745,2162588..2163445)
location: region:2139132-2163445:1
so has part: feature:2139132-2139328:1:exon
so has part: feature:2149864-2149961:1:exon
so has part: feature:2150687-2150726:1:exon
so has part: feature:2152102-2152239:1:exon
so has part: feature:2153293-2153403:1:exon
so has part: feature:2153767-2153941:1:exon
so has part: feature:2154596-2154687:1:exon
so has part: feature:2155876-2156050:1:exon
so has part: feature:2157356-2157441:1:exon
so has part: feature:2158731-2158926:1:exon
so has part: feature:2159020-2159156:1:exon
so has part: feature:2159476-2159616:1:exon
so has part: feature:2160579-2160745:1:exon
so has part: feature:2162588-2163445:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2139132-2139328:1:exon

position:2139328:1
position: 2139328
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2149864-2149961:1:exon

position:2149864:1
position: 2149864
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2149961:1
position: 2149961
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2150687-2150726:1:exon

position:2150687:1
position: 2150687
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2150726:1
position: 2150726
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2152102-2152239:1:exon

position:2152102:1
position: 2152102
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2152239:1
position: 2152239
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2153293-2153403:1:exon

position:2153293:1
position: 2153293
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2153403:1
position: 2153403
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2153767-2153941:1:exon

position:2153767:1
position: 2153767
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2153941:1
position: 2153941
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:2154596-2154687:1:exon

position:2154596:1
position: 2154596
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2154687:1
position: 2154687
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:2155876-2156050:1:exon

position:2155876:1
position: 2155876
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2156050:1
position: 2156050
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:2157356-2157441:1:exon

position:2157356:1
position: 2157356
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2157441:1
position: 2157441
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:2158731-2158926:1:exon

position:2158731:1
position: 2158731
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2158926:1
position: 2158926
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:2159020-2159156:1:exon

position:2159020:1
position: 2159020
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2159156:1
position: 2159156
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:2159476-2159616:1:exon

position:2159476:1
position: 2159476
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2159616:1
position: 2159616
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:2160579-2160745:1:exon

position:2160579:1
position: 2160579
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2160745:1
position: 2160745
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:2162588-2163445:1:exon

position:2162588:1
position: 2162588
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC106730087
type: Gene
subclass of: SO_0000704
RO_0002162: 419612
gene: LOC106730087
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2142197..2147170)
location: region:2142197-2147170:-1
so has part: feature:2142197-2147170:-1:exon
subclass of: SO_0000011

106730087
type: Gene
SIO_000068: ncbigene

position:2142197:-1
position: 2142197
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2147170:-1
position: 2147170
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2142197-2147170:-1:exon

LOC106730087
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 419612
nc RNA class: lncRNA
gene: LOC106730087
product: uncharacterized LOC106730087, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XR_004315310.1
SIO_010081: LOC106730087
subclass of: SO_0000673
so part of: LOC106730087
location: complement(join(2142197..2145857,2146342..2146907,2147020..2147170))
location: region:2142197-2147170:-1
so has part: feature:2147020-2147170:-1:exon
so has part: feature:2146342-2146907:-1:exon
so has part: feature:2142197-2145857:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2147020-2147170:-1:exon

position:2147020:-1
position: 2147020
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2146342-2146907:-1:exon

position:2146342:-1
position: 2146342
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2146907:-1
position: 2146907
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2142197-2145857:-1:exon

position:2145857:-1
position: 2145857
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC106730087
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 419612
nc RNA class: lncRNA
gene: LOC106730087
product: uncharacterized LOC106730087, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 17 samples with support for all annotated introns
transcript id: XR_004315309.1
SIO_010081: LOC106730087
subclass of: SO_0000673
so part of: LOC106730087
location: complement(join(2142197..2146907,2147020..2147170))
location: region:2142197-2147170:-1
so has part: feature:2147020-2147170:-1:exon
so has part: feature:2142197-2146907:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2147020-2147170:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2142197-2146907:-1:exon

PLAT
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 419612
gene: PLAT
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tissue-type plasminogen activator
translation: MMNATRRGLLCVLLLWGAVFASPSQESHRRPRRGSRSRVTCRDEKTQMVYQQHESWLRPLLRGNRVEHCWCNGGQPQCHSVPVRSCSEPRCFNGGTCRQALYSSEFVCQCPEGFVGKRCEIDASATCYKDKGVTYRGTWSTVESGAECANWNSSGLASKPYSGRRPDAIKLGLGNHNYCRNPDQDSKPWCYVFKAGKYISEFCSTPACSKKDDGDCYFGKGLAYRGTRSLTTSGASCLPWNSMILIGKVYTAWKTNAQALGLGKHNHCRNPDGDTKPWCHVLKDHQLTWEYCDLPQCDTCGLRQYRQPQFRIKGGLFADITSHPWQAAIFAKHRRSPGERFLCGGILISSCWVLSAAHCFQERFPPHHLKVVLGRTYRLVPGEEEQVFEVEKYIVHKEFDDDIYDNDIALLQLKSDSLSCAQESDSVRTVCLPDADLQLPDWTECELSGYGKHEASSPFYSERLKEAHVRLYPSRRCTSQYLFNRTVTNNMLCAGDTRSGGNQDNLHDACQGDSGGPLVCMKDNHMTLVGIISWGLGCGQKDVPGVYTKVTNYLDWIRDNTRP
SIO_010081: PLAT
subclass of: SO_0000673
so part of: PLAT
location: join(2149887..2149961,2150687..2150726,2152102..2152239,2153293..2153403,2153767..2153941,2154596..2154687,2155876..2156050,2157356..2157441,2158731..2158926,2159020..2159156,2159476..2159616,2160579..2160745,2162588..2162746)
location: region:2149887-2162746:1
so has part: feature:2149887-2149961:1:exon
so has part: feature:2150687-2150726:1:exon
so has part: feature:2152102-2152239:1:exon
so has part: feature:2153293-2153403:1:exon
so has part: feature:2153767-2153941:1:exon
so has part: feature:2154596-2154687:1:exon
so has part: feature:2155876-2156050:1:exon
so has part: feature:2157356-2157441:1:exon
so has part: feature:2158731-2158926:1:exon
so has part: feature:2159020-2159156:1:exon
so has part: feature:2159476-2159616:1:exon
so has part: feature:2160579-2160745:1:exon
so has part: feature:2162588-2162746:1:exon

XP_006188445.3
type: Protein
SIO_000068: ncbiprotein

position:2149887:1
position: 2149887
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2162746:1
position: 2162746
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2149887-2149961:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2150687-2150726:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2152102-2152239:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2153293-2153403:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2153767-2153941:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2154596-2154687:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2155876-2156050:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2157356-2157441:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2158731-2158926:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2159020-2159156:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2159476-2159616:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2160579-2160745:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2162588-2162746:1:exon

AP3M2
type: Gene
subclass of: SO_0000704
RO_0002162: 419612
gene: AP3M2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2165334..2185596)
location: region:2165334-2185596:-1
so has part: feature:2165334-2185596:-1:exon
subclass of: SO_0000010

102507460
type: Gene
SIO_000068: ncbigene

position:2165334:-1
position: 2165334
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2185596:-1
position: 2185596
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2165334-2185596:-1:exon

AP3M2
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 419612
gene: AP3M2
product: adaptor related protein complex 3 subunit mu 2, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 13 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns
transcript id: XR_004315346.1
SIO_010081: AP3M2
so part of: AP3M2
location: complement(join(2165334..2167450,2167587..2168135,2169403..2169547,2169773..2169980,2171437..2171570,2171802..2171887,2175671..2175808,2179010..2179181,2183664..2184008,2185503..2185596))
location: region:2165334-2185596:-1
so has part: feature:2185503-2185596:-1:exon
so has part: feature:2183664-2184008:-1:exon
so has part: feature:2179010-2179181:-1:exon
so has part: feature:2175671-2175808:-1:exon
so has part: feature:2171802-2171887:-1:exon
so has part: feature:2171437-2171570:-1:exon
so has part: feature:2169773-2169980:-1:exon
so has part: feature:2169403-2169547:-1:exon
so has part: feature:2167587-2168135:-1:exon
so has part: feature:2165334-2167450:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2185503-2185596:-1:exon

position:2185503:-1
position: 2185503
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2183664-2184008:-1:exon

position:2183664:-1
position: 2183664
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2184008:-1
position: 2184008
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2179010-2179181:-1:exon

position:2179010:-1
position: 2179010
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2179181:-1
position: 2179181
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2175671-2175808:-1:exon

position:2175671:-1
position: 2175671
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2175808:-1
position: 2175808
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2171802-2171887:-1:exon

position:2171802:-1
position: 2171802
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2171887:-1
position: 2171887
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2171437-2171570:-1:exon

position:2171437:-1
position: 2171437
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2171570:-1
position: 2171570
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:2169773-2169980:-1:exon

position:2169773:-1
position: 2169773
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2169980:-1
position: 2169980
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:2169403-2169547:-1:exon

position:2169403:-1
position: 2169403
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2169547:-1
position: 2169547
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:2167587-2168135:-1:exon

position:2167587:-1
position: 2167587
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2168135:-1
position: 2168135
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:2165334-2167450:-1:exon

position:2167450:-1
position: 2167450
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

AP3M2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 419612
gene: AP3M2
product: adaptor related protein complex 3 subunit mu 2, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 13 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 25 samples with support for all annotated introns
transcript id: XM_032468442.1
SIO_010081: AP3M2
subclass of: SO_0000673
so part of: AP3M2
location: complement(join(2165334..2168135,2169403..2169547,2169773..2169980,2171437..2171570,2171802..2171887,2175671..2175808,2179010..2179181,2183664..2184008,2185503..2185596))
location: region:2165334-2185596:-1
so has part: feature:2185503-2185596:-1:exon
so has part: feature:2183664-2184008:-1:exon
so has part: feature:2179010-2179181:-1:exon
so has part: feature:2175671-2175808:-1:exon
so has part: feature:2171802-2171887:-1:exon
so has part: feature:2171437-2171570:-1:exon
so has part: feature:2169773-2169980:-1:exon
so has part: feature:2169403-2169547:-1:exon
so has part: feature:2165334-2168135:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2185503-2185596:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2183664-2184008:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2179010-2179181:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2175671-2175808:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2171802-2171887:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2171437-2171570:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2169773-2169980:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2169403-2169547:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2165334-2168135:-1:exon

AP3M2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 419612
gene: AP3M2
product: adaptor related protein complex 3 subunit mu 2, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 13 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns
transcript id: XM_032468443.1
SIO_010081: AP3M2
subclass of: SO_0000673
so part of: AP3M2
location: complement(join(2165334..2168135,2169403..2169547,2169773..2169980,2171437..2171570,2171802..2171887,2175671..2175808,2179010..2179181,2183664..2184008,2185370..2185444))
location: region:2165334-2185444:-1
so has part: feature:2185370-2185444:-1:exon
so has part: feature:2183664-2184008:-1:exon
so has part: feature:2179010-2179181:-1:exon
so has part: feature:2175671-2175808:-1:exon
so has part: feature:2171802-2171887:-1:exon
so has part: feature:2171437-2171570:-1:exon
so has part: feature:2169773-2169980:-1:exon
so has part: feature:2169403-2169547:-1:exon
so has part: feature:2165334-2168135:-1:exon

position:2185444:-1
position: 2185444
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2185370-2185444:-1:exon

position:2185370:-1
position: 2185370
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2183664-2184008:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2179010-2179181:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2175671-2175808:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2171802-2171887:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2171437-2171570:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2169773-2169980:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2169403-2169547:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2165334-2168135:-1:exon

AP3M2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 419612
gene: AP3M2
product: adaptor related protein complex 3 subunit mu 2, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_032468444.1
SIO_010081: AP3M2
subclass of: SO_0000673
so part of: AP3M2
location: complement(join(2165334..2168135,2169403..2169547,2169773..2169980,2171437..2171570,2171802..2171887,2175671..2175808,2179010..2179181,2183664..2183828,2185370..2185426))
location: region:2165334-2185426:-1
so has part: feature:2185370-2185426:-1:exon
so has part: feature:2183664-2183828:-1:exon
so has part: feature:2179010-2179181:-1:exon
so has part: feature:2175671-2175808:-1:exon
so has part: feature:2171802-2171887:-1:exon
so has part: feature:2171437-2171570:-1:exon
so has part: feature:2169773-2169980:-1:exon
so has part: feature:2169403-2169547:-1:exon
so has part: feature:2165334-2168135:-1:exon

position:2185426:-1
position: 2185426
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2185370-2185426:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2183664-2183828:-1:exon

position:2183828:-1
position: 2183828
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2179010-2179181:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2175671-2175808:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2171802-2171887:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2171437-2171570:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2169773-2169980:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2169403-2169547:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2165334-2168135:-1:exon

AP3M2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 419612
gene: AP3M2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: AP-3 complex subunit mu-2 isoform X2
translation: MGCRRRDPLSCRMLRGEERATEAENVPPVIPTPHHYLLSVYRHKIFFVAVVQTEVPPLFVIEFLHRVVDTFQDYFGVCSEPVIKDNVVVVYEVLEEMLDNGFPLATESNILKELIKPPTILRTVVNTITGSTNVGDQLPTGQLSVVPWRRTGVKYTNNEAYFDVIEEIDAIIDKSGSTITAEIQGVIDACVKLTGMPDLTLSFMNPRLLDDVSFHPCVRFKRWESERILSFIPPDGNFRLLSYHVSAQNLVAIPVYVKHSISFRDSSSLGRFEITVGPKQTMGKTIEGVTVTSQMPKGVLNMSLTPSQGTHTFDPVTKMLSWDVGKINPQKLPSLKGTMSLQAGASKPDENPTINLQFKIQQLAISGLKVNRLDMYGEKYKPFKGIKYMTKAGKFQVRT
SIO_010081: AP3M2
subclass of: SO_0000673
so part of: AP3M2
location: complement(join(2168035..2168135,2169403..2169547,2169773..2169980,2171437..2171570,2171802..2171887,2175671..2175808,2179010..2179181,2183664..2183828,2185370..2185420))
location: region:2168035-2185420:-1
so has part: feature:2185370-2185420:-1:exon
so has part: feature:2183664-2183828:-1:exon
so has part: feature:2179010-2179181:-1:exon
so has part: feature:2175671-2175808:-1:exon
so has part: feature:2171802-2171887:-1:exon
so has part: feature:2171437-2171570:-1:exon
so has part: feature:2169773-2169980:-1:exon
so has part: feature:2169403-2169547:-1:exon
so has part: feature:2168035-2168135:-1:exon

XP_032324335.1
type: Protein
SIO_000068: ncbiprotein

position:2168035:-1
position: 2168035
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2185420:-1
position: 2185420
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2185370-2185420:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2183664-2183828:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2179010-2179181:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2175671-2175808:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2171802-2171887:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2171437-2171570:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2169773-2169980:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2169403-2169547:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2168035-2168135:-1:exon

AP3M2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 419612
gene: AP3M2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: AP-3 complex subunit mu-2 isoform X1
translation: MIHSLFLINSSGDIFLEKHWKSVVSRSVCDYFFEAQERATEAENVPPVIPTPHHYLLSVYRHKIFFVAVVQTEVPPLFVIEFLHRVVDTFQDYFGVCSEPVIKDNVVVVYEVLEEMLDNGFPLATESNILKELIKPPTILRTVVNTITGSTNVGDQLPTGQLSVVPWRRTGVKYTNNEAYFDVIEEIDAIIDKSGSTITAEIQGVIDACVKLTGMPDLTLSFMNPRLLDDVSFHPCVRFKRWESERILSFIPPDGNFRLLSYHVSAQNLVAIPVYVKHSISFRDSSSLGRFEITVGPKQTMGKTIEGVTVTSQMPKGVLNMSLTPSQGTHTFDPVTKMLSWDVGKINPQKLPSLKGTMSLQAGASKPDENPTINLQFKIQQLAISGLKVNRLDMYGEKYKPFKGIKYMTKAGKFQVRT
SIO_010081: AP3M2
subclass of: SO_0000673
so part of: AP3M2
location: complement(join(2168035..2168135,2169403..2169547,2169773..2169980,2171437..2171570,2171802..2171887,2175671..2175808,2179010..2179181,2183664..2183936))
location: region:2168035-2183936:-1
so has part: feature:2183664-2183936:-1:exon
so has part: feature:2179010-2179181:-1:exon
so has part: feature:2175671-2175808:-1:exon
so has part: feature:2171802-2171887:-1:exon
so has part: feature:2171437-2171570:-1:exon
so has part: feature:2169773-2169980:-1:exon
so has part: feature:2169403-2169547:-1:exon
so has part: feature:2168035-2168135:-1:exon

XP_032324333.1
type: Protein
SIO_000068: ncbiprotein

position:2183936:-1
position: 2183936
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2183664-2183936:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2179010-2179181:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2175671-2175808:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2171802-2171887:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2171437-2171570:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2169773-2169980:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2169403-2169547:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2168035-2168135:-1:exon

AP3M2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 419612
gene: AP3M2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: AP-3 complex subunit mu-2 isoform X1
translation: MIHSLFLINSSGDIFLEKHWKSVVSRSVCDYFFEAQERATEAENVPPVIPTPHHYLLSVYRHKIFFVAVVQTEVPPLFVIEFLHRVVDTFQDYFGVCSEPVIKDNVVVVYEVLEEMLDNGFPLATESNILKELIKPPTILRTVVNTITGSTNVGDQLPTGQLSVVPWRRTGVKYTNNEAYFDVIEEIDAIIDKSGSTITAEIQGVIDACVKLTGMPDLTLSFMNPRLLDDVSFHPCVRFKRWESERILSFIPPDGNFRLLSYHVSAQNLVAIPVYVKHSISFRDSSSLGRFEITVGPKQTMGKTIEGVTVTSQMPKGVLNMSLTPSQGTHTFDPVTKMLSWDVGKINPQKLPSLKGTMSLQAGASKPDENPTINLQFKIQQLAISGLKVNRLDMYGEKYKPFKGIKYMTKAGKFQVRT
SIO_010081: AP3M2
subclass of: SO_0000673
so part of: AP3M2
location: complement(join(2168035..2168135,2169403..2169547,2169773..2169980,2171437..2171570,2171802..2171887,2175671..2175808,2179010..2179181,2183664..2183936))
location: region:2168035-2183936:-1
so has part: feature:2183664-2183936:-1:exon
so has part: feature:2179010-2179181:-1:exon
so has part: feature:2175671-2175808:-1:exon
so has part: feature:2171802-2171887:-1:exon
so has part: feature:2171437-2171570:-1:exon
so has part: feature:2169773-2169980:-1:exon
so has part: feature:2169403-2169547:-1:exon
so has part: feature:2168035-2168135:-1:exon

XP_032324334.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2183664-2183936:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2179010-2179181:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2175671-2175808:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2171802-2171887:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2171437-2171570:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2169773-2169980:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2169403-2169547:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2168035-2168135:-1:exon

AP3M2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 419612
gene: AP3M2
product: adaptor related protein complex 3 subunit mu 2, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 25 samples with support for all annotated introns
transcript id: XM_032468445.1
SIO_010081: AP3M2
subclass of: SO_0000673
so part of: AP3M2
location: complement(join(2169567..2169980,2171437..2171570,2171802..2171887,2175671..2175808,2179010..2179181,2183664..2184008,2185503..2185596))
location: region:2169567-2185596:-1
so has part: feature:2185503-2185596:-1:exon
so has part: feature:2183664-2184008:-1:exon
so has part: feature:2179010-2179181:-1:exon
so has part: feature:2175671-2175808:-1:exon
so has part: feature:2171802-2171887:-1:exon
so has part: feature:2171437-2171570:-1:exon
so has part: feature:2169567-2169980:-1:exon

position:2169567:-1
position: 2169567
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2185503-2185596:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2183664-2184008:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2179010-2179181:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2175671-2175808:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2171802-2171887:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2171437-2171570:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2169567-2169980:-1:exon

AP3M2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 419612
gene: AP3M2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: AP-3 complex subunit mu-2 isoform X3
translation: MIHSLFLINSSGDIFLEKHWKSVVSRSVCDYFFEAQERATEAENVPPVIPTPHHYLLSVYRHKIFFVAVVQTEVPPLFVIEFLHRVVDTFQDYFGVCSEPVIKDNVVVVYEVLEEMLDNGFPLATESNILKELIKPPTILRTVVNTITGSTNVGDQLPTGQLSVVPWRRTGVKYTNNEAYFDVIEEIDAIIDKSGSTITAEIQGVIDACVKLTGMPDLTLSFMNPRLLDDVSFHPCVRFKRWESERILSFIPPDGNFRLLSYHVSAQNLVAIPVYVKHSISFRDSSSLGRFEITVGPKQTMGKTIEGVTVTSQMPKGVLNMSLTPSQGTHTFDPVTKVGD
SIO_010081: AP3M2
subclass of: SO_0000673
so part of: AP3M2
location: complement(join(2169761..2169980,2171437..2171570,2171802..2171887,2175671..2175808,2179010..2179181,2183664..2183936))
location: region:2169761-2183936:-1
so has part: feature:2183664-2183936:-1:exon
so has part: feature:2179010-2179181:-1:exon
so has part: feature:2175671-2175808:-1:exon
so has part: feature:2171802-2171887:-1:exon
so has part: feature:2171437-2171570:-1:exon
so has part: feature:2169761-2169980:-1:exon

XP_032324336.1
type: Protein
SIO_000068: ncbiprotein

position:2169761:-1
position: 2169761
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2183664-2183936:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2179010-2179181:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2175671-2175808:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2171802-2171887:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2171437-2171570:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2169761-2169980:-1:exon

LOC116660056
type: Gene
subclass of: SO_0000704
RO_0002162: 419612
gene: LOC116660056
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2214427..2242816)
location: region:2214427-2242816:-1
so has part: feature:2214427-2242816:-1:exon
subclass of: SO_0000011

116660056
type: Gene
SIO_000068: ncbigene

position:2214427:-1
position: 2214427
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2242816:-1
position: 2242816
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2214427-2242816:-1:exon

LOC116660056
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 419612
nc RNA class: lncRNA
gene: LOC116660056
product: uncharacterized LOC116660056
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XR_004315410.1
SIO_010081: LOC116660056
subclass of: SO_0000673
so part of: LOC116660056
location: complement(join(2214427..2218240,2218370..2218537,2242484..2242816))
location: region:2214427-2242816:-1
so has part: feature:2242484-2242816:-1:exon
so has part: feature:2218370-2218537:-1:exon
so has part: feature:2214427-2218240:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2242484-2242816:-1:exon

position:2242484:-1
position: 2242484
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2218370-2218537:-1:exon

position:2218370:-1
position: 2218370
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2218537:-1
position: 2218537
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2214427-2218240:-1:exon

position:2218240:-1
position: 2218240
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

KAT6A
type: Gene
subclass of: SO_0000704
RO_0002162: 419612
gene: KAT6A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2242877..2340081
location: region:2242877-2340081:1
so has part: feature:2242877-2340081:1:exon
subclass of: SO_0000010

102513914
type: Gene
SIO_000068: ncbigene

position:2242877:1
position: 2242877
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2340081:1
position: 2340081
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2242877-2340081:1:exon

KAT6A
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 419612
gene: KAT6A
product: lysine acetyltransferase 6A
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 40 samples with support for all annotated introns
transcript id: XM_032468649.1
SIO_010081: KAT6A
subclass of: SO_0000673
so part of: KAT6A
location: join(2242877..2243021,2245542..2246459,2292326..2292434,2296235..2296350,2296916..2296997,2299249..2299384,2300700..2301016,2303322..2303440,2312605..2312720,2323536..2323677,2325187..2325348,2326694..2326787,2328674..2328905,2329529..2329736,2330919..2331536,2334215..2334527,2334667..2340081)
location: region:2242877-2340081:1
so has part: feature:2242877-2243021:1:exon
so has part: feature:2245542-2246459:1:exon
so has part: feature:2292326-2292434:1:exon
so has part: feature:2296235-2296350:1:exon
so has part: feature:2296916-2296997:1:exon
so has part: feature:2299249-2299384:1:exon
so has part: feature:2300700-2301016:1:exon
so has part: feature:2303322-2303440:1:exon
so has part: feature:2312605-2312720:1:exon
so has part: feature:2323536-2323677:1:exon
so has part: feature:2325187-2325348:1:exon
so has part: feature:2326694-2326787:1:exon
so has part: feature:2328674-2328905:1:exon
so has part: feature:2329529-2329736:1:exon
so has part: feature:2330919-2331536:1:exon
so has part: feature:2334215-2334527:1:exon
so has part: feature:2334667-2340081:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2242877-2243021:1:exon

position:2243021:1
position: 2243021
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2245542-2246459:1:exon

position:2245542:1
position: 2245542
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2246459:1
position: 2246459
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2292326-2292434:1:exon

position:2292326:1
position: 2292326
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2292434:1
position: 2292434
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2296235-2296350:1:exon

position:2296235:1
position: 2296235
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2296350:1
position: 2296350
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2296916-2296997:1:exon

position:2296916:1
position: 2296916
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2296997:1
position: 2296997
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2299249-2299384:1:exon

position:2299249:1
position: 2299249
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2299384:1
position: 2299384
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:2300700-2301016:1:exon

position:2300700:1
position: 2300700
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2301016:1
position: 2301016
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:2303322-2303440:1:exon

position:2303322:1
position: 2303322
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2303440:1
position: 2303440
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:2312605-2312720:1:exon

position:2312605:1
position: 2312605
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2312720:1
position: 2312720
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:2323536-2323677:1:exon

position:2323536:1
position: 2323536
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2323677:1
position: 2323677
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:2325187-2325348:1:exon

position:2325187:1
position: 2325187
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2325348:1
position: 2325348
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:2326694-2326787:1:exon

position:2326694:1
position: 2326694
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2326787:1
position: 2326787
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:2328674-2328905:1:exon

position:2328674:1
position: 2328674
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2328905:1
position: 2328905
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:2329529-2329736:1:exon

position:2329529:1
position: 2329529
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2329736:1
position: 2329736
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:2330919-2331536:1:exon

position:2330919:1
position: 2330919
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2331536:1
position: 2331536
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:2334215-2334527:1:exon

position:2334215:1
position: 2334215
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2334527:1
position: 2334527
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:2334667-2340081:1:exon

position:2334667:1
position: 2334667
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

KAT6A
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 419612
gene: KAT6A
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: histone acetyltransferase KAT6A
translation: MVKLANPLYTEWILEAIKKVKKQKQRPSEERICNAVSSSHGLDRKTVLEQLELSVKDGTILKVSNKGLNSYKDPDNPGRIALPKPRNHGKLDNKQNVDWNKLIKRAVEGLAESGGSTLKSIERFLKGQKDVSALFGGGAASGFHQQLRLAIKRAVGHGRLLKDGPLYRLNTKATNVDGKESCESLSSLPPVSLLPHEKDKPVAEPIPICSFCLGTKEQNREKKPEELISCADCGNSGHPSCLKFSPELTVRVKALRWQCIECKTCSSCRDQGKNADNMLFCDSCDRGFHMECCDPPLTRMPKGMWICQICRPRKKGRKLLQKKAAQIKRRYANPIGRPKNRLKKQNTVSKSPFSKVRTGPGRGRKRKITLSSQSASSSEEGYLERIDGLDFCRDGSVPLKFNKKTKGLIDGLTKFFTPSPDGRKPRGEVVDYSEQYRIRKKGSRKSSTSDWPADNQDGWDGKQESEERLFGNQEVMTEKDMELFRDIQEQALQKVGVTGPPDPQVRCPSVIEFGKYEIHTWYSSPYPQEYSRLPKLYLCEFCLKYMKSRTILQQHMKKCGWFHPPANEIYRKNNISVFEVDGNVSTIYCQNLCLLAKLFLDHKTLYYDVEPFLFYVLTQNDVKGCHLVGYFSKEKHCQQKYNVSCIMILPQYQRKGYGRFLIDFSYLLSKREGQAGSPEKPLSDLGRLSYMAYWKSVILECLYHQNDKQISIKKLSKLTGICPQDITSTLHHLRMLDFRSDQFVIIRREKLIQDHMAKLQLNLRPVDVDPECLRWTPVIVSNSVVSEEEEEEEAEEEQEEPQSQEGDLETSVGKATCRENKEPESCSSVESEKKPEAPAAASSARLSKQALPRDSPPANSPPARRGRWPRKSRKAQDRFGDKDPKLLLEETSAPREQYGDCEEKPEPPPEQDAESEEPPAASQEQPGQDGKADAPRRRAGEGLELWRAPLRRSPEVLKCALPDGHDRLPRRYADGRFGDADRALLRGFSESSEEEEEPESPRSSSPPVLTKPTLKRKKPILHRRRRVRKRKHHNSSVVTETISETTEVLDEPFEDSDSERPMPRLEPTFEMDEEEEEEDEGDLFSRGYFHRLSSQDVLRCRSSSKRKSKDEDEDEESDDADDTPILKPVSLLRKCDVKDSPLEPDVSLPMKKKKGWPKGKSRKPVHWKKRPGRKPGFKLSREMVPVCAQECLMEPVVPLPKPGRKLRIQENEETIEPKEDLLLMEERKEEEELPAEAEEVEDGEEEDATGSDVRAASPADSSGPETEAKEPDVGEEEEKPRVPAEQRPAEEEPQEPEGPEPEEEEDGAAGTAQHEDHDADDEDDGHLESTKKEGPEERPSREDAREEPGGRESFLDTNMQSSRETAKDKDETEPDSEEEQTSQEASVVSEHMPGSEDDHEEDSNSKEELVELKEEEEIPHSELDLETVQAVQSLTREESGEHEAAYQDCDETLAACQTLQSYTQADEDPQLSLVEDCHASEHNSPMSSVQSHPSQSVRSVSSPSVPALESGYTQISPEQGSLSAPSMQNLETSPMMDVPSVSDHSQQVVDSGFSDLGSIESTTENYENPSSYDSTMGGSICGNGSSQNSCSYGGLSSSSSLTQSSCVVTQQMAGMGSSCSMLQQNGVQPAANCSIKSPQSCVVERPPSNQQPPPQPPPPPPQQPPPPPPQPAPQPPPPPQQQQRRPRPRRPPQPAPPPPQPPPPPQQQPPLSQCSMNNSFTPAPMIMEIPESGSTGNISIYERIPGDFGAGSYSQPSATFSLAKLQQLTNTIMDPHAMPYSHSPAVTSYATSVSLSNTGLAQLAPSHPLAGTPQAQATMTPPPNLASTTMNLTSPLLQCNMSATNIGIPHTQRLQGQMPVKGHISIRSKSAPLPSAAAHQQQLYGRSPPAVAMQAGPRALAVQRGMNMGVNLMPTPAYNVNSMNMNTLNAMNSYRMTQPMMNSSYHSNPAYMNQTAQYPMQMQMGMMGSQAYTQQPMQPNPHGNMMYTGPSHHSYMNAAG…
SIO_010081: KAT6A
subclass of: SO_0000673
so part of: KAT6A
location: join(2245860..2246459,2292326..2292434,2296235..2296350,2296916..2296997,2299249..2299384,2300700..2301016,2303322..2303440,2312605..2312720,2323536..2323677,2325187..2325348,2326694..2326787,2328674..2328905,2329529..2329736,2330919..2331536,2334215..2334527,2334667..2337345)
location: region:2245860-2337345:1
so has part: feature:2245860-2246459:1:exon
so has part: feature:2292326-2292434:1:exon
so has part: feature:2296235-2296350:1:exon
so has part: feature:2296916-2296997:1:exon
so has part: feature:2299249-2299384:1:exon
so has part: feature:2300700-2301016:1:exon
so has part: feature:2303322-2303440:1:exon
so has part: feature:2312605-2312720:1:exon
so has part: feature:2323536-2323677:1:exon
so has part: feature:2325187-2325348:1:exon
so has part: feature:2326694-2326787:1:exon
so has part: feature:2328674-2328905:1:exon
so has part: feature:2329529-2329736:1:exon
so has part: feature:2330919-2331536:1:exon
so has part: feature:2334215-2334527:1:exon
so has part: feature:2334667-2337345:1:exon

XP_032324540.1
type: Protein
SIO_000068: ncbiprotein

position:2245860:1
position: 2245860
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2337345:1
position: 2337345
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2245860-2246459:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2292326-2292434:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2296235-2296350:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2296916-2296997:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2299249-2299384:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2300700-2301016:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2303322-2303440:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2312605-2312720:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2323536-2323677:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2325187-2325348:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2326694-2326787:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2328674-2328905:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2329529-2329736:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2330919-2331536:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2334215-2334527:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2334667-2337345:1:exon

LOC102513677
type: Gene
subclass of: SO_0000704
RO_0002162: 419612
gene: LOC102513677
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2350624..2354323
location: region:2350624-2354323:1
so has part: feature:2350624-2354323:1:exon
subclass of: SO_0000010

102513677
type: Gene
SIO_000068: ncbigene

position:2350624:1
position: 2350624
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2354323:1
position: 2354323
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2350624-2354323:1:exon

LOC102513677
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 419612
gene: LOC102513677
product: keratin, type I cytoskeletal 18-like
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 13 Proteins, and 30% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_032468390.1
SIO_010081: LOC102513677
subclass of: SO_0000673
so part of: LOC102513677
location: join(2350624..2350723,2351781..2352754,2354276..2354323)
location: region:2350624-2354323:1
so has part: feature:2350624-2350723:1:exon
so has part: feature:2351781-2352754:1:exon
so has part: feature:2354276-2354323:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2350624-2350723:1:exon

position:2350723:1
position: 2350723
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2351781-2352754:1:exon

position:2351781:1
position: 2351781
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2352754:1
position: 2352754
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2354276-2354323:1:exon

position:2354276:1
position: 2354276
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC102513677
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 419612
gene: LOC102513677
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: keratin, type I cytoskeletal 18-like
translation: MDQTFTLPPRGFWNSKARAAIISDDLGEPRQDLECKSTFSNYWSLGSVQSPGHQIRLVSSVASVYAGAGVSDSLISVFGSTNIWRGWGSGNMGSGMARALVGVGSIQDEKETMQDLNDCLASYLEMGRSLETNNQKLESKIHEHLEKKGPQVRDWGHSLKTIKDLWAQIFANSVDNARIVLQIDACLAAADFTVKCETELATCQSVESDIHRPHKVIDDTSVTHLQLETEMEAFKEELLFTKKNPEEEVTGLPNQTANSGLIVELAVPKSQDLSKIMADILVQYDEIAQKNREELGKCWSQQTEDSSTVVTSKTADIGAAQMTLTELRWTIXNLDSTRNLKASLENRLREMVLFGERELRFVAGDPSGQVCGS
SIO_010081: LOC102513677
subclass of: SO_0000673
so part of: LOC102513677
location: join(2350624..2350723,2351781..2352754,2354276..2354323)
location: region:2350624-2354323:1
so has part: feature:2350624-2350723:1:exon
so has part: feature:2351781-2352754:1:exon
so has part: feature:2354276-2354323:1:exon

XP_032324281.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2350624-2350723:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2351781-2352754:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2354276-2354323:1:exon

ANK1
type: Gene
subclass of: SO_0000704
RO_0002162: 419612
gene: ANK1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2355360..2548284
location: region:2355360-2548284:1
so has part: feature:2355360-2548284:1:exon
subclass of: SO_0000010

102513437
type: Gene
SIO_000068: ncbigene

position:2355360:1
position: 2355360
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2548284:1
position: 2548284
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2355360-2548284:1:exon

ANK1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 419612
gene: ANK1
product: ankyrin 1
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 21 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_032468775.1
SIO_010081: ANK1
subclass of: SO_0000673
so part of: ANK1
location: join(2355360..2355613,2457810..2457911,2479468..2479566,2483519..2483617,2484166..2484264,2485238..2485424,2486420..2486518,2486943..2487041,2487310..2487408,2490127..2490324,2491714..2491812,2492227..2492325,2492804..2492902,2494849..2495046,2495618..2495716,2496152..2496250,2500272..2500469,2502571..2502669,2504440..2504538,2504768..2504866,2505872..2505964,2506426..2506498,2507192..2507215,2508085..2508181,2509213..2509291,2511242..2511339,2511423..2511647,2512565..2512719,2513004..2513215,2513684..2513888,2514190..2514286,2514544..2514772,2515825..2515950,2516063..2516182,2517249..2517327,2517621..2517695,2519058..2519189,2520461..2520607,2530559..2531120,2534040..2534337,2538426..2538509,2539497..2539637,2539848..2539982,2545852..2548284)
location: region:2355360-2548284:1
so has part: feature:2355360-2355613:1:exon
so has part: feature:2457810-2457911:1:exon
so has part: feature:2479468-2479566:1:exon
so has part: feature:2483519-2483617:1:exon
so has part: feature:2484166-2484264:1:exon
so has part: feature:2485238-2485424:1:exon
so has part: feature:2486420-2486518:1:exon
so has part: feature:2486943-2487041:1:exon
so has part: feature:2487310-2487408:1:exon
so has part: feature:2490127-2490324:1:exon
so has part: feature:2491714-2491812:1:exon
so has part: feature:2492227-2492325:1:exon
so has part: feature:2492804-2492902:1:exon
so has part: feature:2494849-2495046:1:exon
so has part: feature:2495618-2495716:1:exon
so has part: feature:2496152-2496250:1:exon
so has part: feature:2500272-2500469:1:exon
so has part: feature:2502571-2502669:1:exon
so has part: feature:2504440-2504538:1:exon
so has part: feature:2504768-2504866:1:exon
so has part: feature:2505872-2505964:1:exon
so has part: feature:2506426-2506498:1:exon
so has part: feature:2507192-2507215:1:exon
so has part: feature:2508085-2508181:1:exon
so has part: feature:2509213-2509291:1:exon
so has part: feature:2511242-2511339:1:exon
so has part: feature:2511423-2511647:1:exon
so has part: feature:2512565-2512719:1:exon
so has part: feature:2513004-2513215:1:exon
so has part: feature:2513684-2513888:1:exon
so has part: feature:2514190-2514286:1:exon
so has part: feature:2514544-2514772:1:exon
so has part: feature:2515825-2515950:1:exon
so has part: feature:2516063-2516182:1:exon
so has part: feature:2517249-2517327:1:exon
so has part: feature:2517621-2517695:1:exon
so has part: feature:2519058-2519189:1:exon
so has part: feature:2520461-2520607:1:exon
so has part: feature:2530559-2531120:1:exon
so has part: feature:2534040-2534337:1:exon
so has part: feature:2538426-2538509:1:exon
so has part: feature:2539497-2539637:1:exon
so has part: feature:2539848-2539982:1:exon
so has part: feature:2545852-2548284:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2355360-2355613:1:exon

position:2355613:1
position: 2355613
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2457810-2457911:1:exon

position:2457810:1
position: 2457810
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2457911:1
position: 2457911
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2479468-2479566:1:exon

position:2479468:1
position: 2479468
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2479566:1
position: 2479566
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2483519-2483617:1:exon

position:2483519:1
position: 2483519
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2483617:1
position: 2483617
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2484166-2484264:1:exon

position:2484166:1
position: 2484166
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2484264:1
position: 2484264
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2485238-2485424:1:exon

position:2485238:1
position: 2485238
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2485424:1
position: 2485424
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:2486420-2486518:1:exon

position:2486420:1
position: 2486420
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2486518:1
position: 2486518
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:2486943-2487041:1:exon

position:2486943:1
position: 2486943
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2487041:1
position: 2487041
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:2487310-2487408:1:exon

position:2487310:1
position: 2487310
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2487408:1
position: 2487408
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:2490127-2490324:1:exon

position:2490127:1
position: 2490127
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2490324:1
position: 2490324
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:2491714-2491812:1:exon

position:2491714:1
position: 2491714
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2491812:1
position: 2491812
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:2492227-2492325:1:exon

position:2492227:1
position: 2492227
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2492325:1
position: 2492325
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:2492804-2492902:1:exon

position:2492804:1
position: 2492804
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2492902:1
position: 2492902
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:2494849-2495046:1:exon

position:2494849:1
position: 2494849
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2495046:1
position: 2495046
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:2495618-2495716:1:exon

position:2495618:1
position: 2495618
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2495716:1
position: 2495716
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:2496152-2496250:1:exon

position:2496152:1
position: 2496152
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2496250:1
position: 2496250
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:2500272-2500469:1:exon

position:2500272:1
position: 2500272
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2500469:1
position: 2500469
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:2502571-2502669:1:exon

position:2502571:1
position: 2502571
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2502669:1
position: 2502669
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:2504440-2504538:1:exon

position:2504440:1
position: 2504440
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2504538:1
position: 2504538
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:2504768-2504866:1:exon

position:2504768:1
position: 2504768
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2504866:1
position: 2504866
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:2505872-2505964:1:exon

position:2505872:1
position: 2505872
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2505964:1
position: 2505964
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:2506426-2506498:1:exon

position:2506426:1
position: 2506426
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2506498:1
position: 2506498
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:2507192-2507215:1:exon

position:2507192:1
position: 2507192
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2507215:1
position: 2507215
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:2508085-2508181:1:exon

position:2508085:1
position: 2508085
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2508181:1
position: 2508181
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:2509213-2509291:1:exon

position:2509213:1
position: 2509213
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2509291:1
position: 2509291
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 26
SIO_000628: feature:2511242-2511339:1:exon

position:2511242:1
position: 2511242
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2511339:1
position: 2511339
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 27
SIO_000628: feature:2511423-2511647:1:exon

position:2511423:1
position: 2511423
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2511647:1
position: 2511647
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 28
SIO_000628: feature:2512565-2512719:1:exon

position:2512565:1
position: 2512565
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2512719:1
position: 2512719
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 29
SIO_000628: feature:2513004-2513215:1:exon

position:2513004:1
position: 2513004
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2513215:1
position: 2513215
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 30
SIO_000628: feature:2513684-2513888:1:exon

position:2513684:1
position: 2513684
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2513888:1
position: 2513888
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 31
SIO_000628: feature:2514190-2514286:1:exon

position:2514190:1
position: 2514190
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2514286:1
position: 2514286
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 32
SIO_000628: feature:2514544-2514772:1:exon

position:2514544:1
position: 2514544
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2514772:1
position: 2514772
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 33
SIO_000628: feature:2515825-2515950:1:exon

position:2515825:1
position: 2515825
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2515950:1
position: 2515950
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 34
SIO_000628: feature:2516063-2516182:1:exon

position:2516063:1
position: 2516063
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2516182:1
position: 2516182
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 35
SIO_000628: feature:2517249-2517327:1:exon

position:2517249:1
position: 2517249
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2517327:1
position: 2517327
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 36
SIO_000628: feature:2517621-2517695:1:exon

position:2517621:1
position: 2517621
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2517695:1
position: 2517695
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 37
SIO_000628: feature:2519058-2519189:1:exon

position:2519058:1
position: 2519058
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2519189:1
position: 2519189
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 38
SIO_000628: feature:2520461-2520607:1:exon

position:2520461:1
position: 2520461
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2520607:1
position: 2520607
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 39
SIO_000628: feature:2530559-2531120:1:exon

position:2530559:1
position: 2530559
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2531120:1
position: 2531120
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 40
SIO_000628: feature:2534040-2534337:1:exon

position:2534040:1
position: 2534040
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2534337:1
position: 2534337
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 41
SIO_000628: feature:2538426-2538509:1:exon

position:2538426:1
position: 2538426
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2538509:1
position: 2538509
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 42
SIO_000628: feature:2539497-2539637:1:exon

position:2539497:1
position: 2539497
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2539637:1
position: 2539637
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 43
SIO_000628: feature:2539848-2539982:1:exon

position:2539848:1
position: 2539848
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2539982:1
position: 2539982
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 44
SIO_000628: feature:2545852-2548284:1:exon

position:2545852:1
position: 2545852
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

ANK1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 419612
gene: ANK1
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: ankyrin-1
translation: MAQAAKQLKKIKDIEAQALQEQKEKEESNRKRRNRSRDRKKKADAATSFLRAARSGNLDKALDHLRNGVDINTCNQNGLNGLHLASKEGHVKMVVELLHKEIILETTTKKGNTALHIAALAGQDEVVRELVNYGANVNAQSQKGFTPLYMAAQENHLEVVKFLLENGANQNVATEDGFTPLAVALQQGHENVVAHLINYGTKGKVRLPALHIAARNDDTRTAAVLLQNDPNPDVLSKTGFTPLHIAAHYENLNVAQLLLNRGANVNFTPQNGITPLHIASRRGNVIMVRLLLDRGAQIETRTKDELTPLHCAARNGHVRISEILLDHGAPIQAKTKNGLSPIHMAAQGDHLDCVRLLLQYNAEIDDITLDHLTPLHVAAHCGHHRVAKVLLDKGAKPNSRALNGFTPLHIACKKNHIRVMELLLKTGASIDAVTESGLTPLHVASFMGHLPIVKNLLQREASPNVSNVKVETPLHMAARAGHTEVAKYLLQNKAKVNAKAKDDQTPLHCAARIGHTNMVKLLLENNANPNLATTAGHTPLHIAAREGHVEAALALLEKDASQACMTKKGFTPLHVAAKYGKVRVAELLLEHDAHPNAAGKSGLTPLHVAVHHNHLDIVKLLLPRGGSPHSPAWNGYTPLHIAAKQNQMEVARSLLQYGALANAESVQGVTPLHLAAQEGHAEMVALLLSRQANGNLGNKSGLTPLHLVAQEGHVPVADVLIKHGVTVDATTRMGYTPLHVASHYGNIKLVKFLLQHQADVNAKTKLGYSPLHQAAQQGHTDVVTLLLRNGASPNEVSSNGTTPLAIARRLGYISVTDVLKVVTDETSVVSVSDKHRMSFPETVDEILDVSEDEGTAHITIMGEELVSSKAEKQDSRDVDEEKELLDFVPKLDQVVESPAIPRIPCVTPETVVIRPEEPEQASKEYDEDSLIPSSPATETSDNISPVASPVHTGFLVSFMVDARGGSMRGSRHNGLRVVVPPRTCAAPTRITCRLVKPQKLPTPPPLAEEEGLASRVIALGPTGVQFLSPVIVEIPHFASPGRGDRELVVLRSENGSVWKEHKSRYGESYLDQLLNGMDEELESLEELEKRRVCRIITTDFPLYFVVMSRLCQDYDTIGPEGGSLKSQLVPLVQATFPENAVTKRVKLALQAQPVPDELVTKLLGNQATFSPIVTVEPRRRKFHRPIGLRIPLPPSWTDNPRDSGEGDTTSLRLLCSVIGGTDQAQWEDITGTTKLVYANECATFTTNVSARFWLSDCPRTAEAVNFASLLYKELTAVPYTARFVIFAKMTDPREGRLRCYCMTDDKVDKTLEQHENFVEVARSRDIEVLEGMPLFAELSGNLVPVKKAAQQRSFLFQSFRENRLVIPVKVRDSSREPGGSLSFLRKAMKYEDTQHILCHLNITMPPCTKGSGADERRRTLTPLGLKYSIFSESTLGVLSSMDRADMKMAIISEHLGLSWAELARELQFSVEDINRIRVENPNSLLEQSAALLNLWVVREGQNAKMENLYAALRSIDRSELVNMLENSSRQSRNLKPERRHAERDYSSSPSQMNGYSSLQDELLSPASLHYALPSPLRADQYWSEVAAVIDAIPLAATEHDAMLEMSDIQVWSAGLTPSLVTAEDSSLECSKAEDSDATGHEWKLEGVLSEGPQGPALGSLDLVEDDTVDSDATNGLIDLLEQEEGQRSEEKLPSHERQEDSTGAGQDSENEVSLVSGQQRVQARIPESPTVSRVTDSSQDRLQDWDAEGSIVSYLQEATQGSWPEEVPRGPHSFQRRVSAVRGLEPSRSQEDEEDLASATEHVRVKQPQADSPRAGREQRRQSPRERLQEADSAFSHVVQENELQNIPGEQVTEEHFTDEQGNVVTKKIIRKVVRQIEPSGADDTQEHGEVISEGPLEDPSEMEADIDFFMPHTKVELRGSGLQPDLIEGRKGAQIVKRASLKRGKQ
SIO_010081: ANK1
subclass of: SO_0000673
so part of: ANK1
location: join(2355488..2355613,2457810..2457911,2479468..2479566,2483519..2483617,2484166..2484264,2485238..2485424,2486420..2486518,2486943..2487041,2487310..2487408,2490127..2490324,2491714..2491812,2492227..2492325,2492804..2492902,2494849..2495046,2495618..2495716,2496152..2496250,2500272..2500469,2502571..2502669,2504440..2504538,2504768..2504866,2505872..2505964,2506426..2506498,2507192..2507215,2508085..2508181,2509213..2509291,2511242..2511339,2511423..2511647,2512565..2512719,2513004..2513215,2513684..2513888,2514190..2514286,2514544..2514772,2515825..2515950,2516063..2516182,2517249..2517327,2517621..2517695,2519058..2519189,2520461..2520607,2530559..2531120,2534040..2534337,2538426..2538509,2539497..2539637,2539848..2539946)
location: region:2355488-2539946:1
so has part: feature:2355488-2355613:1:exon
so has part: feature:2457810-2457911:1:exon
so has part: feature:2479468-2479566:1:exon
so has part: feature:2483519-2483617:1:exon
so has part: feature:2484166-2484264:1:exon
so has part: feature:2485238-2485424:1:exon
so has part: feature:2486420-2486518:1:exon
so has part: feature:2486943-2487041:1:exon
so has part: feature:2487310-2487408:1:exon
so has part: feature:2490127-2490324:1:exon
so has part: feature:2491714-2491812:1:exon
so has part: feature:2492227-2492325:1:exon
so has part: feature:2492804-2492902:1:exon
so has part: feature:2494849-2495046:1:exon
so has part: feature:2495618-2495716:1:exon
so has part: feature:2496152-2496250:1:exon
so has part: feature:2500272-2500469:1:exon
so has part: feature:2502571-2502669:1:exon
so has part: feature:2504440-2504538:1:exon
so has part: feature:2504768-2504866:1:exon
so has part: feature:2505872-2505964:1:exon
so has part: feature:2506426-2506498:1:exon
so has part: feature:2507192-2507215:1:exon
so has part: feature:2508085-2508181:1:exon
so has part: feature:2509213-2509291:1:exon
so has part: feature:2511242-2511339:1:exon
so has part: feature:2511423-2511647:1:exon
so has part: feature:2512565-2512719:1:exon
so has part: feature:2513004-2513215:1:exon
so has part: feature:2513684-2513888:1:exon
so has part: feature:2514190-2514286:1:exon
so has part: feature:2514544-2514772:1:exon
so has part: feature:2515825-2515950:1:exon
so has part: feature:2516063-2516182:1:exon
so has part: feature:2517249-2517327:1:exon
so has part: feature:2517621-2517695:1:exon
so has part: feature:2519058-2519189:1:exon
so has part: feature:2520461-2520607:1:exon
so has part: feature:2530559-2531120:1:exon
so has part: feature:2534040-2534337:1:exon
so has part: feature:2538426-2538509:1:exon
so has part: feature:2539497-2539637:1:exon
so has part: feature:2539848-2539946:1:exon

XP_032324666.1
type: Protein
SIO_000068: ncbiprotein

position:2355488:1
position: 2355488
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2539946:1
position: 2539946
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2355488-2355613:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2457810-2457911:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2479468-2479566:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2483519-2483617:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2484166-2484264:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2485238-2485424:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2486420-2486518:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2486943-2487041:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2487310-2487408:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2490127-2490324:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2491714-2491812:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2492227-2492325:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2492804-2492902:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2494849-2495046:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2495618-2495716:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2496152-2496250:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:2500272-2500469:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:2502571-2502669:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:2504440-2504538:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:2504768-2504866:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:2505872-2505964:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:2506426-2506498:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:2507192-2507215:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:2508085-2508181:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:2509213-2509291:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:2511242-2511339:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:2511423-2511647:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:2512565-2512719:1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:2513004-2513215:1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:2513684-2513888:1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:2514190-2514286:1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:2514544-2514772:1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:2515825-2515950:1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:2516063-2516182:1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:2517249-2517327:1:exon

urn:…
SIO_000300: 36
SIO_000628: feature:2517621-2517695:1:exon

urn:…
SIO_000300: 37
SIO_000628: feature:2519058-2519189:1:exon

urn:…
SIO_000300: 38
SIO_000628: feature:2520461-2520607:1:exon

urn:…
SIO_000300: 39
SIO_000628: feature:2530559-2531120:1:exon

urn:…
SIO_000300: 40
SIO_000628: feature:2534040-2534337:1:exon

urn:…
SIO_000300: 41
SIO_000628: feature:2538426-2538509:1:exon

urn:…
SIO_000300: 42
SIO_000628: feature:2539497-2539637:1:exon

urn:…
SIO_000300: 43
SIO_000628: feature:2539848-2539946:1:exon

LOC106730086
type: Gene
subclass of: SO_0000704
RO_0002162: 419612
gene: LOC106730086
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2414470..2429653)
location: region:2414470-2429653:-1
so has part: feature:2414470-2429653:-1:exon
subclass of: SO_0000011

106730086
type: Gene
SIO_000068: ncbigene

position:2414470:-1
position: 2414470
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2429653:-1
position: 2429653
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2414470-2429653:-1:exon

LOC106730086
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 419612
nc RNA class: lncRNA
gene: LOC106730086
product: uncharacterized LOC106730086
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 33 samples with support for all annotated introns
transcript id: XR_001366520.2
SIO_010081: LOC106730086
subclass of: SO_0000673
so part of: LOC106730086
location: complement(join(2414470..2415899,2428906..2429020,2429116..2429653))
location: region:2414470-2429653:-1
so has part: feature:2429116-2429653:-1:exon
so has part: feature:2428906-2429020:-1:exon
so has part: feature:2414470-2415899:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2429116-2429653:-1:exon

position:2429116:-1
position: 2429116
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2428906-2429020:-1:exon

position:2428906:-1
position: 2428906
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2429020:-1
position: 2429020
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2414470-2415899:-1:exon

position:2415899:-1
position: 2415899
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

NKX6-3
type: Gene
subclass of: SO_0000704
RO_0002162: 419612
gene: NKX6-3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2550379..2555781
location: region:2550379-2555781:1
so has part: feature:2550379-2555781:1:exon
subclass of: SO_0000010

102513190
type: Gene
SIO_000068: ncbigene

position:2550379:1
position: 2550379
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2555781:1
position: 2555781
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2550379-2555781:1:exon

NKX6-3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 419612
gene: NKX6-3
product: NK6 homeobox 3, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_032468546.1
SIO_010081: NKX6-3
subclass of: SO_0000673
so part of: NKX6-3
location: join(2550379..2550583,2550832..2551195,2552976..2553145,2553398..2553455,2554466..2555781)
location: region:2550379-2555781:1
so has part: feature:2550379-2550583:1:exon
so has part: feature:2550832-2551195:1:exon
so has part: feature:2552976-2553145:1:exon
so has part: feature:2553398-2553455:1:exon
so has part: feature:2554466-2555781:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2550379-2550583:1:exon

position:2550583:1
position: 2550583
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2550832-2551195:1:exon

position:2550832:1
position: 2550832
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2551195:1
position: 2551195
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2552976-2553145:1:exon

position:2552976:1
position: 2552976
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2553145:1
position: 2553145
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2553398-2553455:1:exon

position:2553398:1
position: 2553398
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2553455:1
position: 2553455
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2554466-2555781:1:exon

position:2554466:1
position: 2554466
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

NKX6-3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 419612
gene: NKX6-3
product: NK6 homeobox 3, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_032468545.1
SIO_010081: NKX6-3
subclass of: SO_0000673
so part of: NKX6-3
location: join(2550382..2551195,2552976..2553145,2553398..2553455,2554466..2555781)
location: region:2550382-2555781:1
so has part: feature:2550382-2551195:1:exon
so has part: feature:2552976-2553145:1:exon
so has part: feature:2553398-2553455:1:exon
so has part: feature:2554466-2555781:1:exon

position:2550382:1
position: 2550382
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2550382-2551195:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2552976-2553145:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2553398-2553455:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2554466-2555781:1:exon

NKX6-3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 419612
gene: NKX6-3
product: NK6 homeobox 3, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_032468548.1
SIO_010081: NKX6-3
subclass of: SO_0000673
so part of: NKX6-3
location: join(2550389..2551195,2552976..2553145,2554478..2554799)
location: region:2550389-2554799:1
so has part: feature:2550389-2551195:1:exon
so has part: feature:2552976-2553145:1:exon
so has part: feature:2554478-2554799:1:exon

position:2550389:1
position: 2550389
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2554799:1
position: 2554799
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2550389-2551195:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2552976-2553145:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2554478-2554799:1:exon

position:2554478:1
position: 2554478
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

NKX6-3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 419612
gene: NKX6-3
product: NK6 homeobox 3, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_032468547.1
SIO_010081: NKX6-3
subclass of: SO_0000673
so part of: NKX6-3
location: join(2550394..2551195,2552976..2553145,2554466..2554793)
location: region:2550394-2554793:1
so has part: feature:2550394-2551195:1:exon
so has part: feature:2552976-2553145:1:exon
so has part: feature:2554466-2554793:1:exon

position:2550394:1
position: 2550394
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2554793:1
position: 2554793
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2550394-2551195:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2552976-2553145:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2554466-2554793:1:exon

NKX6-3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 419612
gene: NKX6-3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: homeobox protein Nkx-6.3 isoform X1
translation: MESNLQGPFLLNNAPLAQFSEMKAPVCQYSMQNSFYKLSPPGLGPQLPAGTPHGITDILSRPVATPNSSLLSGYPHVAGFGGLGSQGVYYGPQVGNFSKAGSEYPTRTRNCWADTGQNWRGGRQCGNTPDPLSDSVHKKKHTRPTFTGHQIFALEKTFEQTKYLAGPERARLAYSLGMTESQVKQAGGGSHYSAEPSCSRSLAGVVPEPEDQVAEEERPGALVLHPPGPGRRGRGPHGLGERGRRVQQAAGSRLGRREDPAAAPQAPRRLLGAQPGGARRLTPAARPPARPPPQPRGPPQGANGGLRRRRRKGRGRGRLEREDGGRGGGEEEMEGGGGGGGAGSS
SIO_010081: NKX6-3
subclass of: SO_0000673
so part of: NKX6-3
location: join(2550814..2551195,2552976..2553145,2553398..2553455,2554466..2554893)
location: region:2550814-2554893:1
so has part: feature:2550814-2551195:1:exon
so has part: feature:2552976-2553145:1:exon
so has part: feature:2553398-2553455:1:exon
so has part: feature:2554466-2554893:1:exon

XP_032324436.1
type: Protein
SIO_000068: ncbiprotein

position:2550814:1
position: 2550814
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2554893:1
position: 2554893
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2550814-2551195:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2552976-2553145:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2553398-2553455:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2554466-2554893:1:exon

NKX6-3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 419612
gene: NKX6-3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: homeobox protein Nkx-6.3 isoform X3
translation: MESNLQGPFLLNNAPLAQFSEMKAPVCQYSMQNSFYKLSPPGLGPQLPAGTPHGITDILSRPVATPNSSLLSGYPHVAGFGGLGSQGVYYGPQVGNFSKAGSEYPTRTRNCWADTGQNWRGGRQCGNTPDPLSDSVHKKKHTRPTFTGHQIFALEKTFEQTKYLAGPERARLAYSLGMTESQVKVWFQNRRTKWRKKSALEPSSSTPRGPGGAGGDRTASENEDDEYNKPLDPDSDDEKIRLLLRKHRAAFSVLSLGAHGV
SIO_010081: NKX6-3
subclass of: SO_0000673
so part of: NKX6-3
location: join(2550814..2551195,2552976..2553145,2554466..2554699)
location: region:2550814-2554699:1
so has part: feature:2550814-2551195:1:exon
so has part: feature:2552976-2553145:1:exon
so has part: feature:2554466-2554699:1:exon

XP_032324438.1
type: Protein
SIO_000068: ncbiprotein

position:2554699:1
position: 2554699
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2550814-2551195:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2552976-2553145:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2554466-2554699:1:exon

NKX6-3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 419612
gene: NKX6-3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: homeobox protein Nkx-6.3 isoform X4
translation: MESNLQGPFLLNNAPLAQFSEMKAPVCQYSMQNSFYKLSPPGLGPQLPAGTPHGITDILSRPVATPNSSLLSGYPHVAGFGGLGSQGVYYGPQVGNFSKAGSEYPTRTRNCWADTGQNWRGGRQCGNTPDPLSDSVHKKKHTRPTFTGHQIFALEKTFEQTKYLAGPERARLAYSLGMTESQVKNRRTKWRKKSALEPSSSTPRGPGGAGGDRTASENEDDEYNKPLDPDSDDEKIRLLLRKHRAAFSVLSLGAHGV
SIO_010081: NKX6-3
subclass of: SO_0000673
so part of: NKX6-3
location: join(2550814..2551195,2552976..2553145,2554478..2554699)
location: region:2550814-2554699:1
so has part: feature:2550814-2551195:1:exon
so has part: feature:2552976-2553145:1:exon
so has part: feature:2554478-2554699:1:exon

XP_032324439.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2550814-2551195:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2552976-2553145:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2554478-2554699:1:exon

NKX6-3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 419612
gene: NKX6-3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: homeobox protein Nkx-6.3 isoform X2
translation: MKAPVCQYSMQNSFYKLSPPGLGPQLPAGTPHGITDILSRPVATPNSSLLSGYPHVAGFGGLGSQGVYYGPQVGNFSKAGSEYPTRTRNCWADTGQNWRGGRQCGNTPDPLSDSVHKKKHTRPTFTGHQIFALEKTFEQTKYLAGPERARLAYSLGMTESQVKQAGGGSHYSAEPSCSRSLAGVVPEPEDQVAEEERPGALVLHPPGPGRRGRGPHGLGERGRRVQQAAGSRLGRREDPAAAPQAPRRLLGAQPGGARRLTPAARPPARPPPQPRGPPQGANGGLRRRRRKGRGRGRLEREDGGRGGGEEEMEGGGGGGGAGSS
SIO_010081: NKX6-3
subclass of: SO_0000673
so part of: NKX6-3
location: join(2550877..2551195,2552976..2553145,2553398..2553455,2554466..2554893)
location: region:2550877-2554893:1
so has part: feature:2550877-2551195:1:exon
so has part: feature:2552976-2553145:1:exon
so has part: feature:2553398-2553455:1:exon
so has part: feature:2554466-2554893:1:exon

XP_032324437.1
type: Protein
SIO_000068: ncbiprotein

position:2550877:1
position: 2550877
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2550877-2551195:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2552976-2553145:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2553398-2553455:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2554466-2554893:1:exon

LOC116660033
type: Gene
subclass of: SO_0000704
RO_0002162: 419612
gene: LOC116660033
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2563811..2566275
location: region:2563811-2566275:1
so has part: feature:2563811-2566275:1:exon
subclass of: SO_0000011

116660033
type: Gene
SIO_000068: ncbigene

position:2563811:1
position: 2563811
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2566275:1
position: 2566275
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2563811-2566275:1:exon

LOC116660033
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 419612
nc RNA class: lncRNA
gene: LOC116660033
product: uncharacterized LOC116660033
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XR_004315386.1
SIO_010081: LOC116660033
subclass of: SO_0000673
so part of: LOC116660033
location: join(2563811..2563916,2565060..2565383,2566127..2566275)
location: region:2563811-2566275:1
so has part: feature:2563811-2563916:1:exon
so has part: feature:2565060-2565383:1:exon
so has part: feature:2566127-2566275:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2563811-2563916:1:exon

position:2563916:1
position: 2563916
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2565060-2565383:1:exon

position:2565060:1
position: 2565060
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2565383:1
position: 2565383
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2566127-2566275:1:exon

position:2566127:1
position: 2566127
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

GPAT4
type: Gene
subclass of: SO_0000704
RO_0002162: 419612
gene: GPAT4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2569892..2598148)
location: region:2569892-2598148:-1
so has part: feature:2569892-2598148:-1:exon
subclass of: SO_0000010

102506566
type: Gene
SIO_000068: ncbigene

position:2569892:-1
position: 2569892
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2598148:-1
position: 2598148
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2569892-2598148:-1:exon

GPAT4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 419612
gene: GPAT4
product: glycerol-3-phosphate acyltransferase 4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 mRNAs, 20 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 45 samples with support for all annotated introns
transcript id: XM_032468805.1
SIO_010081: GPAT4
subclass of: SO_0000673
so part of: GPAT4
location: complement(join(2569892..2570687,2571904..2571983,2572069..2572197,2574652..2574737,2575612..2575667,2576507..2576622,2577110..2577203,2577377..2577466,2578236..2578310,2579078..2579378,2579533..2579602,2587541..2588535,2597991..2598148))
location: region:2569892-2598148:-1
so has part: feature:2597991-2598148:-1:exon
so has part: feature:2587541-2588535:-1:exon
so has part: feature:2579533-2579602:-1:exon
so has part: feature:2579078-2579378:-1:exon
so has part: feature:2578236-2578310:-1:exon
so has part: feature:2577377-2577466:-1:exon
so has part: feature:2577110-2577203:-1:exon
so has part: feature:2576507-2576622:-1:exon
so has part: feature:2575612-2575667:-1:exon
so has part: feature:2574652-2574737:-1:exon
so has part: feature:2572069-2572197:-1:exon
so has part: feature:2571904-2571983:-1:exon
so has part: feature:2569892-2570687:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2597991-2598148:-1:exon

position:2597991:-1
position: 2597991
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2587541-2588535:-1:exon

position:2587541:-1
position: 2587541
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2588535:-1
position: 2588535
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2579533-2579602:-1:exon

position:2579533:-1
position: 2579533
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2579602:-1
position: 2579602
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2579078-2579378:-1:exon

position:2579078:-1
position: 2579078
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2579378:-1
position: 2579378
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2578236-2578310:-1:exon

position:2578236:-1
position: 2578236
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2578310:-1
position: 2578310
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2577377-2577466:-1:exon

position:2577377:-1
position: 2577377
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2577466:-1
position: 2577466
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:2577110-2577203:-1:exon

position:2577110:-1
position: 2577110
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2577203:-1
position: 2577203
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:2576507-2576622:-1:exon

position:2576507:-1
position: 2576507
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2576622:-1
position: 2576622
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:2575612-2575667:-1:exon

position:2575612:-1
position: 2575612
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2575667:-1
position: 2575667
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:2574652-2574737:-1:exon

position:2574652:-1
position: 2574652
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2574737:-1
position: 2574737
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:2572069-2572197:-1:exon

position:2572069:-1
position: 2572069
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2572197:-1
position: 2572197
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:2571904-2571983:-1:exon

position:2571904:-1
position: 2571904
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2571983:-1
position: 2571983
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:2569892-2570687:-1:exon

position:2570687:-1
position: 2570687
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

GPAT4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 419612
gene: GPAT4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: glycerol-3-phosphate acyltransferase 4
translation: MFLLLPFDSLIVNLLGISLTVLFTLLLVFIIVPAVFGVSFGIRKLYMKTLLKIFAWATLRMERGAKEKNHQLYKPYTNGIIAKDPTSLEEEIKEIRRSGSSKALDNTPDFELSDIFYFCRKGMETIMDDEVTKRFSAEELESWNLLSRTNYNFQYISLRLTVLWGLGVLIRYCFLLPLRIALAFTGISLLVVGTTMVGYLPNGRLKEFLSKHVHLMCYRICVRALTAIITYHDRKNRPRNGGICVANHTSPIDVIILASDGYYAMVGQVHGGLMGVIQRAMVKACPHVWFERSEVKDRHLVAKRLTEHVQDKSKLPILIFPEGTCINNTSVMMFKKGSFEIGATVYPVAIKYDPQFGDAFWNSSKYGMVTYLLRMMTSWAIVCSVWYLPPMTREAEEDAVQFANRVKSAIARQGGLVDLLWDGGLKREKVKDTFKEEQQKLYSKMIVGNQEDRSRS
SIO_010081: GPAT4
subclass of: SO_0000673
so part of: GPAT4
location: complement(join(2570579..2570687,2571904..2571983,2572069..2572197,2574652..2574737,2575612..2575667,2576507..2576622,2577110..2577203,2577377..2577466,2578236..2578310,2579078..2579378,2579533..2579602,2587541..2587705))
location: region:2570579-2587705:-1
so has part: feature:2587541-2587705:-1:exon
so has part: feature:2579533-2579602:-1:exon
so has part: feature:2579078-2579378:-1:exon
so has part: feature:2578236-2578310:-1:exon
so has part: feature:2577377-2577466:-1:exon
so has part: feature:2577110-2577203:-1:exon
so has part: feature:2576507-2576622:-1:exon
so has part: feature:2575612-2575667:-1:exon
so has part: feature:2574652-2574737:-1:exon
so has part: feature:2572069-2572197:-1:exon
so has part: feature:2571904-2571983:-1:exon
so has part: feature:2570579-2570687:-1:exon

XP_032324696.1
type: Protein
SIO_000068: ncbiprotein

position:2570579:-1
position: 2570579
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2587705:-1
position: 2587705
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2587541-2587705:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2579533-2579602:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2579078-2579378:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2578236-2578310:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2577377-2577466:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2577110-2577203:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2576507-2576622:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2575612-2575667:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2574652-2574737:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2572069-2572197:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2571904-2571983:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2570579-2570687:-1:exon

GINS4
type: Gene
subclass of: SO_0000704
RO_0002162: 419612
gene: GINS4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2612800..2624053)
location: region:2612800-2624053:-1
so has part: feature:2612800-2624053:-1:exon
subclass of: SO_0000010

102506318
type: Gene
SIO_000068: ncbigene

position:2612800:-1
position: 2612800
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2624053:-1
position: 2624053
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2612800-2624053:-1:exon

GINS4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 419612
gene: GINS4
product: GINS complex subunit 4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 38 samples with support for all annotated introns
transcript id: XM_014562336.2
SIO_010081: GINS4
subclass of: SO_0000673
so part of: GINS4
location: complement(join(2612800..2613881,2613978..2614068,2616357..2616445,2616604..2616701,2619203..2619316,2620228..2620314,2623121..2623235,2623884..2624053))
location: region:2612800-2624053:-1
so has part: feature:2623884-2624053:-1:exon
so has part: feature:2623121-2623235:-1:exon
so has part: feature:2620228-2620314:-1:exon
so has part: feature:2619203-2619316:-1:exon
so has part: feature:2616604-2616701:-1:exon
so has part: feature:2616357-2616445:-1:exon
so has part: feature:2613978-2614068:-1:exon
so has part: feature:2612800-2613881:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2623884-2624053:-1:exon

position:2623884:-1
position: 2623884
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2623121-2623235:-1:exon

position:2623121:-1
position: 2623121
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2623235:-1
position: 2623235
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2620228-2620314:-1:exon

position:2620228:-1
position: 2620228
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2620314:-1
position: 2620314
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2619203-2619316:-1:exon

position:2619203:-1
position: 2619203
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2619316:-1
position: 2619316
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2616604-2616701:-1:exon

position:2616604:-1
position: 2616604
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2616701:-1
position: 2616701
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2616357-2616445:-1:exon

position:2616357:-1
position: 2616357
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2616445:-1
position: 2616445
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:2613978-2614068:-1:exon

position:2613978:-1
position: 2613978
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2614068:-1
position: 2614068
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:2612800-2613881:-1:exon

position:2613881:-1
position: 2613881
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

GINS4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 419612
gene: GINS4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: DNA replication complex GINS protein SLD5
translation: MMTEELDVSGQDSDGGSEEVVLTPAELIDRLEQAWMNEKFAPELLETKSEIVECVIEQLDHMEENLRRAKKGDLKVSIHQMEMERIRYVLSSYLRCRLMKIEKFFPHILEKEKTRGEGEPSSLSPEEFAFAKEYMTNTETYLKNVALKHMPPNLQKVDLLKAVPKPDLDSYVFLRVKERQENLLVEPETDEQRDYVIDLEEGSQHLIRYKTIAPLVASGAVQLI
SIO_010081: GINS4
subclass of: SO_0000673
so part of: GINS4
location: complement(join(2613785..2613881,2613978..2614068,2616357..2616445,2616604..2616701,2619203..2619316,2620228..2620314,2623121..2623219))
location: region:2613785-2623219:-1
so has part: feature:2623121-2623219:-1:exon
so has part: feature:2620228-2620314:-1:exon
so has part: feature:2619203-2619316:-1:exon
so has part: feature:2616604-2616701:-1:exon
so has part: feature:2616357-2616445:-1:exon
so has part: feature:2613978-2614068:-1:exon
so has part: feature:2613785-2613881:-1:exon

XP_014417822.1
type: Protein
SIO_000068: ncbiprotein

position:2613785:-1
position: 2613785
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2623219:-1
position: 2623219
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2623121-2623219:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2620228-2620314:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2619203-2619316:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2616604-2616701:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2616357-2616445:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2613978-2614068:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2613785-2613881:-1:exon

LOC116660029
type: Gene
subclass of: SO_0000704
RO_0002162: 419612
gene: LOC116660029
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2624191..2628399
location: region:2624191-2628399:1
so has part: feature:2624191-2628399:1:exon
subclass of: SO_0000011

116660029
type: Gene
SIO_000068: ncbigene

position:2624191:1
position: 2624191
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2628399:1
position: 2628399
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2624191-2628399:1:exon

LOC116660029
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 419612
nc RNA class: lncRNA
gene: LOC116660029
product: uncharacterized LOC116660029
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XR_004315382.1
SIO_010081: LOC116660029
subclass of: SO_0000673
so part of: LOC116660029
location: join(2624191..2624388,2625382..2625645,2627236..2628399)
location: region:2624191-2628399:1
so has part: feature:2624191-2624388:1:exon
so has part: feature:2625382-2625645:1:exon
so has part: feature:2627236-2628399:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2624191-2624388:1:exon

position:2624388:1
position: 2624388
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2625382-2625645:1:exon

position:2625382:1
position: 2625382
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2625645:1
position: 2625645
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2627236-2628399:1:exon

position:2627236:1
position: 2627236
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

GOLGA7
type: Gene
subclass of: SO_0000704
RO_0002162: 419612
gene: GOLGA7
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2637344..2653535)
location: region:2637344-2653535:-1
so has part: feature:2637344-2653535:-1:exon
subclass of: SO_0000010

102512941
type: Gene
SIO_000068: ncbigene

position:2637344:-1
position: 2637344
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2653535:-1
position: 2653535
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2637344-2653535:-1:exon

GOLGA7
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 419612
gene: GOLGA7
product: golgin A7, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 47 samples with support for all annotated introns
transcript id: XM_032468383.1
SIO_010081: GOLGA7
subclass of: SO_0000673
so part of: GOLGA7
location: complement(join(2637344..2638724,2641101..2641168,2642198..2642299,2648096..2648248,2653074..2653206,2653421..2653535))
location: region:2637344-2653535:-1
so has part: feature:2653421-2653535:-1:exon
so has part: feature:2653074-2653206:-1:exon
so has part: feature:2648096-2648248:-1:exon
so has part: feature:2642198-2642299:-1:exon
so has part: feature:2641101-2641168:-1:exon
so has part: feature:2637344-2638724:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2653421-2653535:-1:exon

position:2653421:-1
position: 2653421
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2653074-2653206:-1:exon

position:2653074:-1
position: 2653074
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2653206:-1
position: 2653206
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2648096-2648248:-1:exon

position:2648096:-1
position: 2648096
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2648248:-1
position: 2648248
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2642198-2642299:-1:exon

position:2642198:-1
position: 2642198
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2642299:-1
position: 2642299
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2641101-2641168:-1:exon

position:2641101:-1
position: 2641101
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2641168:-1
position: 2641168
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2637344-2638724:-1:exon

position:2638724:-1
position: 2638724
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

GOLGA7
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 419612
gene: GOLGA7
product: golgin A7, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 mRNAs, 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 47 samples with support for all annotated introns
transcript id: XM_032468381.1
SIO_010081: GOLGA7
subclass of: SO_0000673
so part of: GOLGA7
location: complement(join(2637344..2638724,2641101..2641163,2642198..2642299,2648096..2648248,2653074..2653206,2653421..2653531))
location: region:2637344-2653531:-1
so has part: feature:2653421-2653531:-1:exon
so has part: feature:2653074-2653206:-1:exon
so has part: feature:2648096-2648248:-1:exon
so has part: feature:2642198-2642299:-1:exon
so has part: feature:2641101-2641163:-1:exon
so has part: feature:2637344-2638724:-1:exon

position:2653531:-1
position: 2653531
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2653421-2653531:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2653074-2653206:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2648096-2648248:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2642198-2642299:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2641101-2641163:-1:exon

position:2641163:-1
position: 2641163
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2637344-2638724:-1:exon

GOLGA7
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 419612
gene: GOLGA7
product: golgin A7, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 mRNAs, 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 27 samples with support for all annotated introns
transcript id: XM_032468382.1
SIO_010081: GOLGA7
subclass of: SO_0000673
so part of: GOLGA7
location: complement(join(2637344..2638724,2641101..2641163,2642198..2642299,2648096..2648248,2653074..2653206,2653472..2653496))
location: region:2637344-2653496:-1
so has part: feature:2653472-2653496:-1:exon
so has part: feature:2653074-2653206:-1:exon
so has part: feature:2648096-2648248:-1:exon
so has part: feature:2642198-2642299:-1:exon
so has part: feature:2641101-2641163:-1:exon
so has part: feature:2637344-2638724:-1:exon

position:2653496:-1
position: 2653496
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2653472-2653496:-1:exon

position:2653472:-1
position: 2653472
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2653074-2653206:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2648096-2648248:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2642198-2642299:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2641101-2641163:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2637344-2638724:-1:exon

GOLGA7
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 419612
gene: GOLGA7
product: golgin A7, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 28 samples with support for all annotated introns
transcript id: XM_032468384.1
SIO_010081: GOLGA7
subclass of: SO_0000673
so part of: GOLGA7
location: complement(join(2637344..2638724,2641101..2641163,2642198..2642299,2648096..2648248,2653074..2653206,2653364..2653388))
location: region:2637344-2653388:-1
so has part: feature:2653364-2653388:-1:exon
so has part: feature:2653074-2653206:-1:exon
so has part: feature:2648096-2648248:-1:exon
so has part: feature:2642198-2642299:-1:exon
so has part: feature:2641101-2641163:-1:exon
so has part: feature:2637344-2638724:-1:exon

position:2653388:-1
position: 2653388
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2653364-2653388:-1:exon

position:2653364:-1
position: 2653364
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2653074-2653206:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2648096-2648248:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2642198-2642299:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2641101-2641163:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2637344-2638724:-1:exon

GOLGA7
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 419612
gene: GOLGA7
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: golgin subfamily A member 7 isoform X1
translation: MRPQQSPVSGKVFIQRDYSSGTRCQFQTKFPAELENRIDRQQFEETVRTLNNLYAEAEKLGGQSYLEGCLACLTAYTIFLCMETHYEKVLKKVSKYIQEQNEKIYAPQGLLLTDPIERGLRVIEITIYEDRGMSSGR
SIO_010081: GOLGA7
subclass of: SO_0000673
so part of: GOLGA7
location: complement(join(2641116..2641163,2642198..2642299,2648096..2648248,2653074..2653184))
location: region:2641116-2653184:-1
so has part: feature:2653074-2653184:-1:exon
so has part: feature:2648096-2648248:-1:exon
so has part: feature:2642198-2642299:-1:exon
so has part: feature:2641116-2641163:-1:exon

XP_032324272.1
type: Protein
SIO_000068: ncbiprotein

position:2641116:-1
position: 2641116
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2653184:-1
position: 2653184
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2653074-2653184:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2648096-2648248:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2642198-2642299:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2641116-2641163:-1:exon

GOLGA7
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 419612
gene: GOLGA7
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: golgin subfamily A member 7 isoform X1
translation: MRPQQSPVSGKVFIQRDYSSGTRCQFQTKFPAELENRIDRQQFEETVRTLNNLYAEAEKLGGQSYLEGCLACLTAYTIFLCMETHYEKVLKKVSKYIQEQNEKIYAPQGLLLTDPIERGLRVIEITIYEDRGMSSGR
SIO_010081: GOLGA7
subclass of: SO_0000673
so part of: GOLGA7
location: complement(join(2641116..2641163,2642198..2642299,2648096..2648248,2653074..2653184))
location: region:2641116-2653184:-1
so has part: feature:2653074-2653184:-1:exon
so has part: feature:2648096-2648248:-1:exon
so has part: feature:2642198-2642299:-1:exon
so has part: feature:2641116-2641163:-1:exon

XP_032324273.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2653074-2653184:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2648096-2648248:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2642198-2642299:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2641116-2641163:-1:exon

GOLGA7
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 419612
gene: GOLGA7
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: golgin subfamily A member 7 isoform X1
translation: MRPQQSPVSGKVFIQRDYSSGTRCQFQTKFPAELENRIDRQQFEETVRTLNNLYAEAEKLGGQSYLEGCLACLTAYTIFLCMETHYEKVLKKVSKYIQEQNEKIYAPQGLLLTDPIERGLRVIEITIYEDRGMSSGR
SIO_010081: GOLGA7
subclass of: SO_0000673
so part of: GOLGA7
location: complement(join(2641116..2641163,2642198..2642299,2648096..2648248,2653074..2653184))
location: region:2641116-2653184:-1
so has part: feature:2653074-2653184:-1:exon
so has part: feature:2648096-2648248:-1:exon
so has part: feature:2642198-2642299:-1:exon
so has part: feature:2641116-2641163:-1:exon

XP_032324275.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2653074-2653184:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2648096-2648248:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2642198-2642299:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2641116-2641163:-1:exon

GOLGA7
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 419612
gene: GOLGA7
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: golgin subfamily A member 7 isoform X2
translation: MRPQQSPVSGKVFIQRDYSSGTRCQFQTKFPAELENRIDRQQFEETVRTLNNLYAEAEKLGGQSYLEGCLACLTAYTIFLCMETHYEKVLKKVSKYIQEQNEKIYAPQGLLLTDPIERGLRVFRLKLPFMKTEA
SIO_010081: GOLGA7
subclass of: SO_0000673
so part of: GOLGA7
location: complement(join(2641130..2641168,2642198..2642299,2648096..2648248,2653074..2653184))
location: region:2641130-2653184:-1
so has part: feature:2653074-2653184:-1:exon
so has part: feature:2648096-2648248:-1:exon
so has part: feature:2642198-2642299:-1:exon
so has part: feature:2641130-2641168:-1:exon

XP_032324274.1
type: Protein
SIO_000068: ncbiprotein

position:2641130:-1
position: 2641130
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2653074-2653184:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2648096-2648248:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2642198-2642299:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2641130-2641168:-1:exon

LOC116659970
type: Gene
subclass of: SO_0000704
RO_0002162: 419612
gene: LOC116659970
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2653695..2661485
location: region:2653695-2661485:1
so has part: feature:2653695-2661485:1:exon
subclass of: SO_0000011

116659970
type: Gene
SIO_000068: ncbigene

position:2653695:1
position: 2653695
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2661485:1
position: 2661485
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2653695-2661485:1:exon

LOC116659970
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 419612
nc RNA class: lncRNA
gene: LOC116659970
product: uncharacterized LOC116659970, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XR_004315315.1
SIO_010081: LOC116659970
subclass of: SO_0000673
so part of: LOC116659970
location: join(2653695..2655296,2656228..2657821,2657980..2658125,2658666..2661485)
location: region:2653695-2661485:1
so has part: feature:2653695-2655296:1:exon
so has part: feature:2656228-2657821:1:exon
so has part: feature:2657980-2658125:1:exon
so has part: feature:2658666-2661485:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2653695-2655296:1:exon

position:2655296:1
position: 2655296
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2656228-2657821:1:exon

position:2656228:1
position: 2656228
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2657821:1
position: 2657821
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2657980-2658125:1:exon

position:2657980:1
position: 2657980
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2658125:1
position: 2658125
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2658666-2661485:1:exon

position:2658666:1
position: 2658666
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC116659970
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 419612
nc RNA class: lncRNA
gene: LOC116659970
product: uncharacterized LOC116659970, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XR_004315316.1
SIO_010081: LOC116659970
subclass of: SO_0000673
so part of: LOC116659970
location: join(2653695..2655296,2656228..2656320,2657608..2657821,2657980..2658125,2658666..2661485)
location: region:2653695-2661485:1
so has part: feature:2653695-2655296:1:exon
so has part: feature:2656228-2656320:1:exon
so has part: feature:2657608-2657821:1:exon
so has part: feature:2657980-2658125:1:exon
so has part: feature:2658666-2661485:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2653695-2655296:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2656228-2656320:1:exon

position:2656320:1
position: 2656320
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2657608-2657821:1:exon

position:2657608:1
position: 2657608
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2657980-2658125:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2658666-2661485:1:exon

LOC116660114
type: Gene
subclass of: SO_0000704
RO_0002162: 419612
gene: LOC116660114
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: complement(2669041..2669147)
location: region:2669041-2669147:-1
so has part: feature:2669041-2669147:-1:exon
subclass of: SO_0000623

116660114
type: Gene
SIO_000068: ncbigene

position:2669041:-1
position: 2669041
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2669147:-1
position: 2669147
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2669041-2669147:-1:exon

LOC116660114
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 419612
nc RNA class: snRNA
gene: LOC116660114
product: U6 spliceosomal RNA
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00026
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_004315499.1
SIO_010081: LOC116660114
subclass of: SO_0000673
so part of: LOC116660114
location: complement(2669041..2669147)
location: region:2669041-2669147:-1
so has part: feature:2669041-2669147:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2669041-2669147:-1:exon

LOC116659972
type: Gene
subclass of: SO_0000704
RO_0002162: 419612
gene: LOC116659972
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2739875..2745474)
location: region:2739875-2745474:-1
so has part: feature:2739875-2745474:-1:exon
subclass of: SO_0000011

116659972
type: Gene
SIO_000068: ncbigene

position:2739875:-1
position: 2739875
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2745474:-1
position: 2745474
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2739875-2745474:-1:exon

LOC116659972
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 419612
nc RNA class: lncRNA
gene: LOC116659972
product: uncharacterized LOC116659972
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XR_004315318.1
SIO_010081: LOC116659972
subclass of: SO_0000673
so part of: LOC116659972
location: complement(join(2739875..2741308,2743779..2743870,2744548..2745474))
location: region:2739875-2745474:-1
so has part: feature:2744548-2745474:-1:exon
so has part: feature:2743779-2743870:-1:exon
so has part: feature:2739875-2741308:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2744548-2745474:-1:exon

position:2744548:-1
position: 2744548
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2743779-2743870:-1:exon

position:2743779:-1
position: 2743779
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2743870:-1
position: 2743870
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2739875-2741308:-1:exon

position:2741308:-1
position: 2741308
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

SFRP1
type: Gene
subclass of: SO_0000704
RO_0002162: 419612
gene: SFRP1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2760136..2795662
location: region:2760136-2795662:1
so has part: feature:2760136-2795662:1:exon
subclass of: SO_0000010

102512705
type: Gene
SIO_000068: ncbigene

position:2760136:1
position: 2760136
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2795662:1
position: 2795662
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2760136-2795662:1:exon

SFRP1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 419612
gene: SFRP1
product: secreted frizzled related protein 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 15 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 47 samples with support for all annotated introns
transcript id: XM_032468788.1
SIO_010081: SFRP1
subclass of: SO_0000673
so part of: SFRP1
location: join(2760136..2760913,2765495..2765572,2792111..2795662)
location: region:2760136-2795662:1
so has part: feature:2760136-2760913:1:exon
so has part: feature:2765495-2765572:1:exon
so has part: feature:2792111-2795662:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2760136-2760913:1:exon

position:2760913:1
position: 2760913
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2765495-2765572:1:exon

position:2765495:1
position: 2765495
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2765572:1
position: 2765572
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2792111-2795662:1:exon

position:2792111:1
position: 2792111
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

SFRP1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 419612
gene: SFRP1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: secreted frizzled-related protein 1
translation: MGGGRWAAAGVLLALAAGLLAAGSASEYDYVSFQSDIGAYQSGRFYTKPPQCVDIPVDLRLCHNVGYKKMVLPNLLEHETMAEVKQQASSWVPLLNKNCHIGTQVFLCSLFAPVCLDRPIYPCRWLCEAVRDSCEPVMQFFGFYWPEMLKCDKFPEGDVCIAMTPPNATEASKPQGTPVCPPCDNELKSEAIIEHLCASEFALRMKIKEVKKENGDKKIVPKKKKPLKLGPIKKKELKRLVLYLKNGADCPCHQLDNLSHHFLILGRKVKGQYLLTAIHKWDKKNKEFKNFMKKMKTHECPTFQSVFK
SIO_010081: SFRP1
subclass of: SO_0000673
so part of: SFRP1
location: join(2760388..2760913,2765495..2765572,2792111..2792433)
location: region:2760388-2792433:1
so has part: feature:2760388-2760913:1:exon
so has part: feature:2765495-2765572:1:exon
so has part: feature:2792111-2792433:1:exon

XP_032324679.1
type: Protein
SIO_000068: ncbiprotein

position:2760388:1
position: 2760388
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2792433:1
position: 2792433
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2760388-2760913:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2765495-2765572:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2792111-2792433:1:exon

LOC116660025
type: Gene
subclass of: SO_0000704
RO_0002162: 419612
gene: LOC116660025
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2825972..2827597)
location: region:2825972-2827597:-1
so has part: feature:2825972-2827597:-1:exon
subclass of: SO_0000011

116660025
type: Gene
SIO_000068: ncbigene

position:2825972:-1
position: 2825972
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2827597:-1
position: 2827597
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2825972-2827597:-1:exon

LOC116660025
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 419612
nc RNA class: lncRNA
gene: LOC116660025
product: uncharacterized LOC116660025
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XR_004315378.1
SIO_010081: LOC116660025
subclass of: SO_0000673
so part of: LOC116660025
location: complement(join(2825972..2826218,2827075..2827164,2827332..2827597))
location: region:2825972-2827597:-1
so has part: feature:2827332-2827597:-1:exon
so has part: feature:2827075-2827164:-1:exon
so has part: feature:2825972-2826218:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2827332-2827597:-1:exon

position:2827332:-1
position: 2827332
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2827075-2827164:-1:exon

position:2827075:-1
position: 2827075
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2827164:-1
position: 2827164
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2825972-2826218:-1:exon

position:2826218:-1
position: 2826218
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC116660024
type: Gene
subclass of: SO_0000704
RO_0002162: 419612
gene: LOC116660024
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2856216..2883026
location: region:2856216-2883026:1
so has part: feature:2856216-2883026:1:exon
subclass of: SO_0000011

116660024
type: Gene
SIO_000068: ncbigene

position:2856216:1
position: 2856216
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2883026:1
position: 2883026
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2856216-2883026:1:exon

LOC116660024
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 419612
nc RNA class: lncRNA
gene: LOC116660024
product: uncharacterized LOC116660024, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XR_004315377.1
SIO_010081: LOC116660024
subclass of: SO_0000673
so part of: LOC116660024
location: join(2856216..2856855,2874338..2874558,2882907..2883026)
location: region:2856216-2883026:1
so has part: feature:2856216-2856855:1:exon
so has part: feature:2874338-2874558:1:exon
so has part: feature:2882907-2883026:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2856216-2856855:1:exon

position:2856855:1
position: 2856855
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2874338-2874558:1:exon

position:2874338:1
position: 2874338
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2874558:1
position: 2874558
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2882907-2883026:1:exon

position:2882907:1
position: 2882907
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC116660024
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 419612
nc RNA class: lncRNA
gene: LOC116660024
product: uncharacterized LOC116660024, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XR_004315376.1
SIO_010081: LOC116660024
subclass of: SO_0000673
so part of: LOC116660024
location: join(2856216..2856855,2874338..2874558,2878889..2879055)
location: region:2856216-2879055:1
so has part: feature:2856216-2856855:1:exon
so has part: feature:2874338-2874558:1:exon
so has part: feature:2878889-2879055:1:exon

position:2879055:1
position: 2879055
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2856216-2856855:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2874338-2874558:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2878889-2879055:1:exon

position:2878889:1
position: 2878889
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

ZMAT4
type: Gene
subclass of: SO_0000704
RO_0002162: 419612
gene: ZMAT4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2965130..3249869
location: region:2965130-3249869:1
so has part: feature:2965130-3249869:1:exon
subclass of: SO_0000010

102506066
type: Gene
SIO_000068: ncbigene

position:2965130:1
position: 2965130
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3249869:1
position: 3249869
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2965130-3249869:1:exon

ZMAT4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 419612
gene: ZMAT4
product: zinc finger matrin-type 4, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_032468401.1
SIO_010081: ZMAT4
subclass of: SO_0000673
so part of: ZMAT4
location: join(2965130..2965276,3022584..3022689,3069679..3069768,3126793..3126949,3150030..3150257,3213286..3213382,3217271..3217386,3248224..3249869)
location: region:2965130-3249869:1
so has part: feature:2965130-2965276:1:exon
so has part: feature:3022584-3022689:1:exon
so has part: feature:3069679-3069768:1:exon
so has part: feature:3126793-3126949:1:exon
so has part: feature:3150030-3150257:1:exon
so has part: feature:3213286-3213382:1:exon
so has part: feature:3217271-3217386:1:exon
so has part: feature:3248224-3249869:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2965130-2965276:1:exon

position:2965276:1
position: 2965276
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3022584-3022689:1:exon

position:3022584:1
position: 3022584
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3022689:1
position: 3022689
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3069679-3069768:1:exon

position:3069679:1
position: 3069679
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3069768:1
position: 3069768
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3126793-3126949:1:exon

position:3126793:1
position: 3126793
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3126949:1
position: 3126949
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:3150030-3150257:1:exon

position:3150030:1
position: 3150030
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3150257:1
position: 3150257
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:3213286-3213382:1:exon

position:3213286:1
position: 3213286
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3213382:1
position: 3213382
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:3217271-3217386:1:exon

position:3217271:1
position: 3217271
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3217386:1
position: 3217386
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:3248224-3249869:1:exon

position:3248224:1
position: 3248224
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

ZMAT4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 419612
gene: ZMAT4
product: zinc finger matrin-type 4, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_032468400.1
SIO_010081: ZMAT4
subclass of: SO_0000673
so part of: ZMAT4
location: join(2991109..2991204,3022584..3022689,3069679..3069768,3126793..3126949,3150030..3150257,3213286..3213382,3217271..3217386,3248224..3249869)
location: region:2991109-3249869:1
so has part: feature:2991109-2991204:1:exon
so has part: feature:3022584-3022689:1:exon
so has part: feature:3069679-3069768:1:exon
so has part: feature:3126793-3126949:1:exon
so has part: feature:3150030-3150257:1:exon
so has part: feature:3213286-3213382:1:exon
so has part: feature:3217271-3217386:1:exon
so has part: feature:3248224-3249869:1:exon

position:2991109:1
position: 2991109
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2991109-2991204:1:exon

position:2991204:1
position: 2991204
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3022584-3022689:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3069679-3069768:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3126793-3126949:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3150030-3150257:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3213286-3213382:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3217271-3217386:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3248224-3249869:1:exon

ZMAT4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 419612
gene: ZMAT4
product: zinc finger matrin-type 4, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_032468402.1
SIO_010081: ZMAT4
subclass of: SO_0000673
so part of: ZMAT4
location: join(2991109..2991204,3022584..3022689,3069679..3069768,3126793..3126949,3150030..3150257,3213286..3213382,3248224..3249869)
location: region:2991109-3249869:1
so has part: feature:2991109-2991204:1:exon
so has part: feature:3022584-3022689:1:exon
so has part: feature:3069679-3069768:1:exon
so has part: feature:3126793-3126949:1:exon
so has part: feature:3150030-3150257:1:exon
so has part: feature:3213286-3213382:1:exon
so has part: feature:3248224-3249869:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2991109-2991204:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3022584-3022689:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3069679-3069768:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3126793-3126949:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3150030-3150257:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3213286-3213382:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3248224-3249869:1:exon

ZMAT4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 419612
gene: ZMAT4
product: zinc finger matrin-type 4, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_032468403.1
SIO_010081: ZMAT4
subclass of: SO_0000673
so part of: ZMAT4
location: join(2991109..2991204,3022584..3022689,3069679..3069768,3126793..3126949,3213286..3213382,3217271..3217386,3248224..3249869)
location: region:2991109-3249869:1
so has part: feature:2991109-2991204:1:exon
so has part: feature:3022584-3022689:1:exon
so has part: feature:3069679-3069768:1:exon
so has part: feature:3126793-3126949:1:exon
so has part: feature:3213286-3213382:1:exon
so has part: feature:3217271-3217386:1:exon
so has part: feature:3248224-3249869:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2991109-2991204:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3022584-3022689:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3069679-3069768:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3126793-3126949:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3213286-3213382:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3217271-3217386:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3248224-3249869:1:exon

ZMAT4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 419612
gene: ZMAT4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger matrin-type protein 4 isoform X3
translation: MFSFLSPMKSSDLDQDLFTDSYCKVCSAQLISESQRVAHYESRKHASKVRLYYMLHPRDGGCPAKKLRSENGSDADMVDKNKCCTLCNMSFTSAVVADSHYQGKIHAKRLKLLLGEKTPLKTTATPLGALKPPRVDAAPVVSSPYQRRDSDRYCGLCAAWFNNPLMAQQHYDGKKHKKNAARVALLEQLGTTLDTGELRGLRRNYRCTICSVSLNSIEQYHAHLKGSKHQTNLKNK
SIO_010081: ZMAT4
subclass of: SO_0000673
so part of: ZMAT4
location: join(2991188..2991204,3022584..3022689,3069679..3069768,3126793..3126949,3150030..3150257,3213286..3213382,3248224..3248239)
location: region:2991188-3248239:1
so has part: feature:2991188-2991204:1:exon
so has part: feature:3022584-3022689:1:exon
so has part: feature:3069679-3069768:1:exon
so has part: feature:3126793-3126949:1:exon
so has part: feature:3150030-3150257:1:exon
so has part: feature:3213286-3213382:1:exon
so has part: feature:3248224-3248239:1:exon

XP_032324293.1
type: Protein
SIO_000068: ncbiprotein

position:2991188:1
position: 2991188
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3248239:1
position: 3248239
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2991188-2991204:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3022584-3022689:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3069679-3069768:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3126793-3126949:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3150030-3150257:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3213286-3213382:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3248224-3248239:1:exon

ZMAT4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 419612
gene: ZMAT4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger matrin-type protein 4 isoform X1
translation: MFSFLSPMKSSDLDQDLFTDSYCKVCSAQLISESQRVAHYESRKHASKVRLYYMLHPRDGGCPAKKLRSENGSDADMVDKNKCCTLCNMSFTSAVVADSHYQGKIHAKRLKLLLGEKTPLKTTATPLGALKPPRVDAAPVVSSPYQRRDSDRYCGLCAAWFNNPLMAQQHYDGKKHKKNAARVALLEQLGTTLDTGELRGLRRNYRCTICSVSLNSIEQYHAHLKGSKHQTKWTVSETPATPSELEKALSQMVLNCSNLTKSTCQ
SIO_010081: ZMAT4
subclass of: SO_0000673
so part of: ZMAT4
location: join(2991188..2991204,3022584..3022689,3069679..3069768,3126793..3126949,3150030..3150257,3213286..3213382,3217271..3217373)
location: region:2991188-3217373:1
so has part: feature:2991188-2991204:1:exon
so has part: feature:3022584-3022689:1:exon
so has part: feature:3069679-3069768:1:exon
so has part: feature:3126793-3126949:1:exon
so has part: feature:3150030-3150257:1:exon
so has part: feature:3213286-3213382:1:exon
so has part: feature:3217271-3217373:1:exon

XP_032324291.1
type: Protein
SIO_000068: ncbiprotein

position:3217373:1
position: 3217373
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2991188-2991204:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3022584-3022689:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3069679-3069768:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3126793-3126949:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3150030-3150257:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3213286-3213382:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3217271-3217373:1:exon

ZMAT4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 419612
gene: ZMAT4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger matrin-type protein 4 isoform X4
translation: MFSFLSPMKSSDLDQDLFTDSYCKVCSAQLISESQRVAHYESRKHASKVRLYYMLHPRDGGCPAKKLRSENGSDADMVDKNKCCTLCNMSFTSAVVADSHYQGKIHAKRLKLLLGEKTPLKTTGLRRNYRCTICSVSLNSIEQYHAHLKGSKHQTKWTVSETPATPSELEKALSQMVLNCSNLTKSTCQ
SIO_010081: ZMAT4
subclass of: SO_0000673
so part of: ZMAT4
location: join(2991188..2991204,3022584..3022689,3069679..3069768,3126793..3126949,3213286..3213382,3217271..3217373)
location: region:2991188-3217373:1
so has part: feature:2991188-2991204:1:exon
so has part: feature:3022584-3022689:1:exon
so has part: feature:3069679-3069768:1:exon
so has part: feature:3126793-3126949:1:exon
so has part: feature:3213286-3213382:1:exon
so has part: feature:3217271-3217373:1:exon

XP_032324294.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2991188-2991204:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3022584-3022689:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3069679-3069768:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3126793-3126949:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3213286-3213382:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3217271-3217373:1:exon

ZMAT4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 419612
gene: ZMAT4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger matrin-type protein 4 isoform X2
translation: MKSSDLDQDLFTDSYCKVCSAQLISESQRVAHYESRKHASKVRLYYMLHPRDGGCPAKKLRSENGSDADMVDKNKCCTLCNMSFTSAVVADSHYQGKIHAKRLKLLLGEKTPLKTTATPLGALKPPRVDAAPVVSSPYQRRDSDRYCGLCAAWFNNPLMAQQHYDGKKHKKNAARVALLEQLGTTLDTGELRGLRRNYRCTICSVSLNSIEQYHAHLKGSKHQTKWTVSETPATPSELEKALSQMVLNCSNLTKSTCQ
SIO_010081: ZMAT4
subclass of: SO_0000673
so part of: ZMAT4
location: join(3022588..3022689,3069679..3069768,3126793..3126949,3150030..3150257,3213286..3213382,3217271..3217373)
location: region:3022588-3217373:1
so has part: feature:3022588-3022689:1:exon
so has part: feature:3069679-3069768:1:exon
so has part: feature:3126793-3126949:1:exon
so has part: feature:3150030-3150257:1:exon
so has part: feature:3213286-3213382:1:exon
so has part: feature:3217271-3217373:1:exon

XP_032324292.1
type: Protein
SIO_000068: ncbiprotein

position:3022588:1
position: 3022588
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3022588-3022689:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3069679-3069768:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3126793-3126949:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3150030-3150257:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3213286-3213382:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3217271-3217373:1:exon

TRNAA-AGC
type: Gene
subclass of: SO_0000704
RO_0002162: 419612
gene: TRNAA-AGC
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
so part of: sequence
location: complement(3033330..3033401)
location: region:3033330-3033401:-1
so has part: feature:3033330-3033401:-1:exon
subclass of: SO_0000663

116660131
type: Gene
SIO_000068: ncbigene

position:3033330:-1
position: 3033330
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3033401:-1
position: 3033401
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3033330-3033401:-1:exon

TRNAA-AGC
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 419612
gene: TRNAA-AGC
product: tRNA-Ala
inference: COORDINATES: profile:tRNAscan-SE:1.23
note: transfer RNA alanine (anticodon AGC); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:complement(3033367..3033369),aa:Ala, seq:agc)
SIO_010081: TRNAA-AGC
subclass of: SO_0000673
so part of: TRNAA-AGC
location: complement(3033330..3033401)
location: region:3033330-3033401:-1
so has part: feature:3033330-3033401:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3033330-3033401:-1:exon

LOC116660037
type: Gene
subclass of: SO_0000704
RO_0002162: 419612
gene: LOC116660037
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 3440773..3446776
location: region:3440773-3446776:1
so has part: feature:3440773-3446776:1:exon
subclass of: SO_0000011

116660037
type: Gene
SIO_000068: ncbigene

position:3440773:1
position: 3440773
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3446776:1
position: 3446776
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3440773-3446776:1:exon

LOC116660037
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 419612
nc RNA class: lncRNA
gene: LOC116660037
product: uncharacterized LOC116660037
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XR_004315390.1
SIO_010081: LOC116660037
subclass of: SO_0000673
so part of: LOC116660037
location: join(3440773..3441022,3441307..3441440,3446673..3446776)
location: region:3440773-3446776:1
so has part: feature:3440773-3441022:1:exon
so has part: feature:3441307-3441440:1:exon
so has part: feature:3446673-3446776:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3440773-3441022:1:exon

position:3441022:1
position: 3441022
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3441307-3441440:1:exon

position:3441307:1
position: 3441307
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3441440:1
position: 3441440
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3446673-3446776:1:exon

position:3446673:1
position: 3446673
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC116660069
type: Gene
subclass of: SO_0000704
RO_0002162: 419612
gene: LOC116660069
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 3458034..3467144
location: region:3458034-3467144:1
so has part: feature:3458034-3467144:1:exon
subclass of: SO_0000011

116660069
type: Gene
SIO_000068: ncbigene

position:3458034:1
position: 3458034
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3467144:1
position: 3467144
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3458034-3467144:1:exon

LOC116660069
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 419612
nc RNA class: lncRNA
gene: LOC116660069
product: uncharacterized LOC116660069, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XR_004315434.1
SIO_010081: LOC116660069
subclass of: SO_0000673
so part of: LOC116660069
location: join(3458034..3458128,3460685..3460756,3461260..3461480,3461849..3461901,3462648..3462813,3466582..3467144)
location: region:3458034-3467144:1
so has part: feature:3458034-3458128:1:exon
so has part: feature:3460685-3460756:1:exon
so has part: feature:3461260-3461480:1:exon
so has part: feature:3461849-3461901:1:exon
so has part: feature:3462648-3462813:1:exon
so has part: feature:3466582-3467144:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3458034-3458128:1:exon

position:3458128:1
position: 3458128
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3460685-3460756:1:exon

position:3460685:1
position: 3460685
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3460756:1
position: 3460756
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3461260-3461480:1:exon

position:3461260:1
position: 3461260
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3461480:1
position: 3461480
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3461849-3461901:1:exon

position:3461849:1
position: 3461849
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3461901:1
position: 3461901
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:3462648-3462813:1:exon

position:3462648:1
position: 3462648
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3462813:1
position: 3462813
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:3466582-3467144:1:exon

position:3466582:1
position: 3466582
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC116660069
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 419612
nc RNA class: lncRNA
gene: LOC116660069
product: uncharacterized LOC116660069, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XR_004315435.1
SIO_010081: LOC116660069
subclass of: SO_0000673
so part of: LOC116660069
location: join(3458085..3458221,3458322..3458462,3460685..3460756,3461260..3461480,3461849..3461901,3462648..3462813,3466582..3467144)
location: region:3458085-3467144:1
so has part: feature:3458085-3458221:1:exon
so has part: feature:3458322-3458462:1:exon
so has part: feature:3460685-3460756:1:exon
so has part: feature:3461260-3461480:1:exon
so has part: feature:3461849-3461901:1:exon
so has part: feature:3462648-3462813:1:exon
so has part: feature:3466582-3467144:1:exon

position:3458085:1
position: 3458085
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3458085-3458221:1:exon

position:3458221:1
position: 3458221
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3458322-3458462:1:exon

position:3458322:1
position: 3458322
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3458462:1
position: 3458462
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3460685-3460756:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3461260-3461480:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3461849-3461901:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3462648-3462813:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3466582-3467144:1:exon

TCIM
type: Gene
subclass of: SO_0000704
RO_0002162: 419612
gene: TCIM
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(3476322..3478114)
location: region:3476322-3478114:-1
so has part: feature:3476322-3478114:-1:exon
subclass of: SO_0000010

102505813
type: Gene
SIO_000068: ncbigene

position:3476322:-1
position: 3476322
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3478114:-1
position: 3478114
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3476322-3478114:-1:exon

TCIM
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 419612
gene: TCIM
product: transcriptional and immune response regulator
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_014562338.2
SIO_010081: TCIM
subclass of: SO_0000673
so part of: TCIM
location: complement(3476322..3478114)
location: region:3476322-3478114:-1
so has part: feature:3476322-3478114:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3476322-3478114:-1:exon

TCIM
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 419612
gene: TCIM
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transcriptional and immune response regulator
translation: MKAKPRHAACTMSTSLRVSPSVHGYHFDTASRKKAVGNIFENIDQEALQRLFKNSGDKKAEERAKIIFARDQDLEEKTRALMALKKRTKDKLFQFLKLRKYSIKVH
SIO_010081: TCIM
subclass of: SO_0000673
so part of: TCIM
location: complement(3477726..3478046)
location: region:3477726-3478046:-1
so has part: feature:3477726-3478046:-1:exon

XP_014417824.1
type: Protein
SIO_000068: ncbiprotein

position:3477726:-1
position: 3477726
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3478046:-1
position: 3478046
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3477726-3478046:-1:exon

IDO2
type: Gene
subclass of: SO_0000704
RO_0002162: 419612
gene: IDO2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(3557218..3615951)
location: region:3557218-3615951:-1
so has part: feature:3557218-3615951:-1:exon
subclass of: SO_0000010

102518520
type: Gene
SIO_000068: ncbigene

position:3557218:-1
position: 3557218
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3615951:-1
position: 3615951
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3557218-3615951:-1:exon

IDO2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 419612
gene: IDO2
product: indoleamine 2,3-dioxygenase 2, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_032468693.1
SIO_010081: IDO2
subclass of: SO_0000673
so part of: IDO2
location: complement(join(3557218..3557949,3559142..3559290,3567023..3567074,3576426..3576543,3578394..3578493,3578756..3578770,3582315..3582433,3584468..3584587,3615646..3615951))
location: region:3557218-3615951:-1
so has part: feature:3615646-3615951:-1:exon
so has part: feature:3584468-3584587:-1:exon
so has part: feature:3582315-3582433:-1:exon
so has part: feature:3578756-3578770:-1:exon
so has part: feature:3578394-3578493:-1:exon
so has part: feature:3576426-3576543:-1:exon
so has part: feature:3567023-3567074:-1:exon
so has part: feature:3559142-3559290:-1:exon
so has part: feature:3557218-3557949:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3615646-3615951:-1:exon

position:3615646:-1
position: 3615646
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3584468-3584587:-1:exon

position:3584468:-1
position: 3584468
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3584587:-1
position: 3584587
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3582315-3582433:-1:exon

position:3582315:-1
position: 3582315
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3582433:-1
position: 3582433
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3578756-3578770:-1:exon

position:3578756:-1
position: 3578756
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3578770:-1
position: 3578770
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:3578394-3578493:-1:exon

position:3578394:-1
position: 3578394
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3578493:-1
position: 3578493
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:3576426-3576543:-1:exon

position:3576426:-1
position: 3576426
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3576543:-1
position: 3576543
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:3567023-3567074:-1:exon

position:3567023:-1
position: 3567023
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3567074:-1
position: 3567074
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:3559142-3559290:-1:exon

position:3559142:-1
position: 3559142
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3559290:-1
position: 3559290
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:3557218-3557949:-1:exon

position:3557949:-1
position: 3557949
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

IDO2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 419612
gene: IDO2
product: indoleamine 2,3-dioxygenase 2, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_032468692.1
SIO_010081: IDO2
subclass of: SO_0000673
so part of: IDO2
location: complement(join(3557218..3557949,3559142..3559290,3567023..3567074,3576426..3576543,3578394..3578493,3578756..3578770,3582315..3582433,3584468..3584587,3601767..3601862,3615646..3615778))
location: region:3557218-3615778:-1
so has part: feature:3615646-3615778:-1:exon
so has part: feature:3601767-3601862:-1:exon
so has part: feature:3584468-3584587:-1:exon
so has part: feature:3582315-3582433:-1:exon
so has part: feature:3578756-3578770:-1:exon
so has part: feature:3578394-3578493:-1:exon
so has part: feature:3576426-3576543:-1:exon
so has part: feature:3567023-3567074:-1:exon
so has part: feature:3559142-3559290:-1:exon
so has part: feature:3557218-3557949:-1:exon

position:3615778:-1
position: 3615778
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3615646-3615778:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3601767-3601862:-1:exon

position:3601767:-1
position: 3601767
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3601862:-1
position: 3601862
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3584468-3584587:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3582315-3582433:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3578756-3578770:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3578394-3578493:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3576426-3576543:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3567023-3567074:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3559142-3559290:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3557218-3557949:-1:exon

IDO2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 419612
gene: IDO2
product: indoleamine 2,3-dioxygenase 2, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_032468694.1
SIO_010081: IDO2
subclass of: SO_0000673
so part of: IDO2
location: complement(join(3557218..3557949,3559142..3559290,3567023..3567074,3576426..3576543,3578394..3578493,3578756..3578770,3582315..3582433,3584468..3584587,3584961..3585110))
location: region:3557218-3585110:-1
so has part: feature:3584961-3585110:-1:exon
so has part: feature:3584468-3584587:-1:exon
so has part: feature:3582315-3582433:-1:exon
so has part: feature:3578756-3578770:-1:exon
so has part: feature:3578394-3578493:-1:exon
so has part: feature:3576426-3576543:-1:exon
so has part: feature:3567023-3567074:-1:exon
so has part: feature:3559142-3559290:-1:exon
so has part: feature:3557218-3557949:-1:exon

position:3585110:-1
position: 3585110
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3584961-3585110:-1:exon

position:3584961:-1
position: 3584961
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3584468-3584587:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3582315-3582433:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3578756-3578770:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3578394-3578493:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3576426-3576543:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3567023-3567074:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3559142-3559290:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3557218-3557949:-1:exon

IDO2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 419612
gene: IDO2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: indoleamine 2,3-dioxygenase 2 isoform X2
translation: MEPQSPNLKTTPSLTLGRFHISEDYGFLLPSPLMPLLSCQFLTGYREQRLAHLTLSFITIGYVWQEGETQPKEVLPRNLALPFVEVSRSVGLPPILTHSDLVLANWTARDPGRPLEIRNLDIIFSLPGGESLRGFILVIVLVENAAVPGIKALVQAVNAILQPSPESLLQALQRLRLSIQDIKGVLGQMHDYADPDVFYAVIRIFLSGWKDNPAMPAGLIYEGVSNEPLRYSGGSTAQSTVLQAFDEFLGIHHSEESADFLHKMRDYMPPSHKAFIEEIHSAPSLRDHILSSGNGQLLAAYNQCVEALVALRSYHIAMVTKYLITAAARAKGRRPSQLPGPPWALEERGTGGTVVLRFLKSVRDKTLEAILHQSG
SIO_010081: IDO2
subclass of: SO_0000673
so part of: IDO2
location: complement(join(3557594..3557949,3559142..3559290,3567023..3567074,3576426..3576543,3578394..3578493,3578756..3578770,3582315..3582433,3584468..3584587,3615646..3615744))
location: region:3557594-3615744:-1
so has part: feature:3615646-3615744:-1:exon
so has part: feature:3584468-3584587:-1:exon
so has part: feature:3582315-3582433:-1:exon
so has part: feature:3578756-3578770:-1:exon
so has part: feature:3578394-3578493:-1:exon
so has part: feature:3576426-3576543:-1:exon
so has part: feature:3567023-3567074:-1:exon
so has part: feature:3559142-3559290:-1:exon
so has part: feature:3557594-3557949:-1:exon

XP_032324584.1
type: Protein
SIO_000068: ncbiprotein

position:3557594:-1
position: 3557594
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3615744:-1
position: 3615744
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3615646-3615744:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3584468-3584587:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3582315-3582433:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3578756-3578770:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3578394-3578493:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3576426-3576543:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3567023-3567074:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3559142-3559290:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3557594-3557949:-1:exon

IDO2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 419612
gene: IDO2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: indoleamine 2,3-dioxygenase 2 isoform X1
translation: MEPQSPNLKTTPSLTLGRFHISEDYGFLLPSPLRELPDHYRPWMEIANQLPHLIESGQLRAQVDKMPLLSCQFLTGYREQRLAHLTLSFITIGYVWQEGETQPKEVLPRNLALPFVEVSRSVGLPPILTHSDLVLANWTARDPGRPLEIRNLDIIFSLPGGESLRGFILVIVLVENAAVPGIKALVQAVNAILQPSPESLLQALQRLRLSIQDIKGVLGQMHDYADPDVFYAVIRIFLSGWKDNPAMPAGLIYEGVSNEPLRYSGGSTAQSTVLQAFDEFLGIHHSEESADFLHKMRDYMPPSHKAFIEEIHSAPSLRDHILSSGNGQLLAAYNQCVEALVALRSYHIAMVTKYLITAAARAKGRRPSQLPGPPWALEERGTGGTVVLRFLKSVRDKTLEAILHQSG
SIO_010081: IDO2
subclass of: SO_0000673
so part of: IDO2
location: complement(join(3557594..3557949,3559142..3559290,3567023..3567074,3576426..3576543,3578394..3578493,3578756..3578770,3582315..3582433,3584468..3584587,3601767..3601862,3615646..3615744))
location: region:3557594-3615744:-1
so has part: feature:3615646-3615744:-1:exon
so has part: feature:3601767-3601862:-1:exon
so has part: feature:3584468-3584587:-1:exon
so has part: feature:3582315-3582433:-1:exon
so has part: feature:3578756-3578770:-1:exon
so has part: feature:3578394-3578493:-1:exon
so has part: feature:3576426-3576543:-1:exon
so has part: feature:3567023-3567074:-1:exon
so has part: feature:3559142-3559290:-1:exon
so has part: feature:3557594-3557949:-1:exon

XP_032324583.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3615646-3615744:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3601767-3601862:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3584468-3584587:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3582315-3582433:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3578756-3578770:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3578394-3578493:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3576426-3576543:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3567023-3567074:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3559142-3559290:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3557594-3557949:-1:exon

IDO2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 419612
gene: IDO2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: indoleamine 2,3-dioxygenase 2 isoform X3
translation: MPLLSCQFLTGYREQRLAHLTLSFITIGYVWQEGETQPKEVLPRNLALPFVEVSRSVGLPPILTHSDLVLANWTARDPGRPLEIRNLDIIFSLPGGESLRGFILVIVLVENAAVPGIKALVQAVNAILQPSPESLLQALQRLRLSIQDIKGVLGQMHDYADPDVFYAVIRIFLSGWKDNPAMPAGLIYEGVSNEPLRYSGGSTAQSTVLQAFDEFLGIHHSEESADFLHKMRDYMPPSHKAFIEEIHSAPSLRDHILSSGNGQLLAAYNQCVEALVALRSYHIAMVTKYLITAAARAKGRRPSQLPGPPWALEERGTGGTVVLRFLKSVRDKTLEAILHQSG
SIO_010081: IDO2
subclass of: SO_0000673
so part of: IDO2
location: complement(join(3557594..3557949,3559142..3559290,3567023..3567074,3576426..3576543,3578394..3578493,3578756..3578770,3582315..3582433,3584468..3584587))
location: region:3557594-3584587:-1
so has part: feature:3584468-3584587:-1:exon
so has part: feature:3582315-3582433:-1:exon
so has part: feature:3578756-3578770:-1:exon
so has part: feature:3578394-3578493:-1:exon
so has part: feature:3576426-3576543:-1:exon
so has part: feature:3567023-3567074:-1:exon
so has part: feature:3559142-3559290:-1:exon
so has part: feature:3557594-3557949:-1:exon

XP_032324585.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3584468-3584587:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3582315-3582433:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3578756-3578770:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3578394-3578493:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3576426-3576543:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3567023-3567074:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3559142-3559290:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3557594-3557949:-1:exon

IDO1
type: Gene
subclass of: SO_0000704
RO_0002162: 419612
gene: IDO1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(3627471..3641731)
location: region:3627471-3641731:-1
so has part: feature:3627471-3641731:-1:exon
subclass of: SO_0000010

106729416
type: Gene
SIO_000068: ncbigene

position:3627471:-1
position: 3627471
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3641731:-1
position: 3641731
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3627471-3641731:-1:exon

IDO1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 419612
gene: IDO1
product: indoleamine 2,3-dioxygenase 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 15 samples with support for all annotated introns
transcript id: XM_014558119.2
SIO_010081: IDO1
subclass of: SO_0000673
so part of: IDO1
location: complement(join(3627471..3628302,3629289..3629437,3629880..3629931,3630980..3631097,3631799..3631898,3633972..3633986,3634664..3634782,3637773..3637892,3638011..3638106,3641580..3641731))
location: region:3627471-3641731:-1
so has part: feature:3641580-3641731:-1:exon
so has part: feature:3638011-3638106:-1:exon
so has part: feature:3637773-3637892:-1:exon
so has part: feature:3634664-3634782:-1:exon
so has part: feature:3633972-3633986:-1:exon
so has part: feature:3631799-3631898:-1:exon
so has part: feature:3630980-3631097:-1:exon
so has part: feature:3629880-3629931:-1:exon
so has part: feature:3629289-3629437:-1:exon
so has part: feature:3627471-3628302:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3641580-3641731:-1:exon

position:3641580:-1
position: 3641580
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3638011-3638106:-1:exon

position:3638011:-1
position: 3638011
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3638106:-1
position: 3638106
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3637773-3637892:-1:exon

position:3637773:-1
position: 3637773
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3637892:-1
position: 3637892
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3634664-3634782:-1:exon

position:3634664:-1
position: 3634664
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3634782:-1
position: 3634782
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:3633972-3633986:-1:exon

position:3633972:-1
position: 3633972
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3633986:-1
position: 3633986
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:3631799-3631898:-1:exon

position:3631799:-1
position: 3631799
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3631898:-1
position: 3631898
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:3630980-3631097:-1:exon

position:3630980:-1
position: 3630980
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3631097:-1
position: 3631097
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:3629880-3629931:-1:exon

position:3629880:-1
position: 3629880
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3629931:-1
position: 3629931
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:3629289-3629437:-1:exon

position:3629289:-1
position: 3629289
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3629437:-1
position: 3629437
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:3627471-3628302:-1:exon

position:3628302:-1
position: 3628302
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

IDO1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 419612
gene: IDO1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: indoleamine 2,3-dioxygenase 1
translation: MENSWKMFEEFHIDEEMGFALPNPLVELPHPYDAWISIARNLPQLIEDGQLRAEVEKLATLSTDGLEGHKEQRLGHLALGYLTMAYVWGRGDGDIRKVLPSNIAIPYCQLSEKLGLPPILVYADCVLANWKKKDPSGPMTYENMDILFSFPGGDCGKGFFLISLLVEMAAASAIKVIPIIFKAVQCEDSETLQDALREIASCLKRALERFHQIHDYVDPNIFFNVLRIYLSGWKGNPSLPEGLLYEGVWDTPKQFAGGSAAQSSVFQCFDVLLGVQHAAGGASSVSAAEFLQEMRTYMPPAHRNFLRSLESGPSVREFVLSKGDASLRETYNKCVQAMVSLRKYHFQIVTKYILIPARRKSKEKGTSKGSSKSEDKGTGGTSLVDFLKTVRRTTERTLLKEG
SIO_010081: IDO1
subclass of: SO_0000673
so part of: IDO1
location: complement(join(3627938..3628302,3629289..3629437,3629880..3629931,3630980..3631097,3631799..3631898,3633972..3633986,3634664..3634782,3637773..3637892,3638011..3638106,3641580..3641654))
location: region:3627938-3641654:-1
so has part: feature:3641580-3641654:-1:exon
so has part: feature:3638011-3638106:-1:exon
so has part: feature:3637773-3637892:-1:exon
so has part: feature:3634664-3634782:-1:exon
so has part: feature:3633972-3633986:-1:exon
so has part: feature:3631799-3631898:-1:exon
so has part: feature:3630980-3631097:-1:exon
so has part: feature:3629880-3629931:-1:exon
so has part: feature:3629289-3629437:-1:exon
so has part: feature:3627938-3628302:-1:exon

XP_014413605.2
type: Protein
SIO_000068: ncbiprotein

position:3627938:-1
position: 3627938
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3641654:-1
position: 3641654
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3641580-3641654:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3638011-3638106:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3637773-3637892:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3634664-3634782:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3633972-3633986:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3631799-3631898:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3630980-3631097:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3629880-3629931:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3629289-3629437:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3627938-3628302:-1:exon

ADAM18
type: Gene
subclass of: SO_0000704
RO_0002162: 419612
gene: ADAM18
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(3657933..3708852)
location: region:3657933-3708852:-1
so has part: feature:3657933-3708852:-1:exon
subclass of: SO_0000010

106729413
type: Gene
SIO_000068: ncbigene

position:3657933:-1
position: 3657933
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3708852:-1
position: 3708852
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3657933-3708852:-1:exon

ADAM18
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 419612
gene: ADAM18
product: ADAM metallopeptidase domain 18, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 80% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_032468690.1
SIO_010081: ADAM18
subclass of: SO_0000673
so part of: ADAM18
location: complement(join(3657933..3658256,3661298..3661302,3663058..3663176,3666457..3666537,3668737..3668920,3672265..3672370,3675718..3675916,3676477..3676572,3683107..3683290,3686797..3686933,3692313..3692394,3693141..3693307,3693511..3693582,3697210..3697275,3697604..3697781,3698771..3698847,3699197..3699275,3701586..3701641,3707791..3707867,3708466..3708690,3708798..3708852))
location: region:3657933-3708852:-1
so has part: feature:3708798-3708852:-1:exon
so has part: feature:3708466-3708690:-1:exon
so has part: feature:3707791-3707867:-1:exon
so has part: feature:3701586-3701641:-1:exon
so has part: feature:3699197-3699275:-1:exon
so has part: feature:3698771-3698847:-1:exon
so has part: feature:3697604-3697781:-1:exon
so has part: feature:3697210-3697275:-1:exon
so has part: feature:3693511-3693582:-1:exon
so has part: feature:3693141-3693307:-1:exon
so has part: feature:3692313-3692394:-1:exon
so has part: feature:3686797-3686933:-1:exon
so has part: feature:3683107-3683290:-1:exon
so has part: feature:3676477-3676572:-1:exon
so has part: feature:3675718-3675916:-1:exon
so has part: feature:3672265-3672370:-1:exon
so has part: feature:3668737-3668920:-1:exon
so has part: feature:3666457-3666537:-1:exon
so has part: feature:3663058-3663176:-1:exon
so has part: feature:3661298-3661302:-1:exon
so has part: feature:3657933-3658256:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3708798-3708852:-1:exon

position:3708798:-1
position: 3708798
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3708466-3708690:-1:exon

position:3708466:-1
position: 3708466
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3708690:-1
position: 3708690
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3707791-3707867:-1:exon

position:3707791:-1
position: 3707791
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3707867:-1
position: 3707867
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3701586-3701641:-1:exon

position:3701586:-1
position: 3701586
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3701641:-1
position: 3701641
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:3699197-3699275:-1:exon

position:3699197:-1
position: 3699197
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3699275:-1
position: 3699275
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:3698771-3698847:-1:exon

position:3698771:-1
position: 3698771
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3698847:-1
position: 3698847
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:3697604-3697781:-1:exon

position:3697604:-1
position: 3697604
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3697781:-1
position: 3697781
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:3697210-3697275:-1:exon

position:3697210:-1
position: 3697210
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3697275:-1
position: 3697275
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:3693511-3693582:-1:exon

position:3693511:-1
position: 3693511
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3693582:-1
position: 3693582
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:3693141-3693307:-1:exon

position:3693141:-1
position: 3693141
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3693307:-1
position: 3693307
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:3692313-3692394:-1:exon

position:3692313:-1
position: 3692313
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3692394:-1
position: 3692394
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:3686797-3686933:-1:exon

position:3686797:-1
position: 3686797
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3686933:-1
position: 3686933
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:3683107-3683290:-1:exon

position:3683107:-1
position: 3683107
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3683290:-1
position: 3683290
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:3676477-3676572:-1:exon

position:3676477:-1
position: 3676477
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3676572:-1
position: 3676572
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:3675718-3675916:-1:exon

position:3675718:-1
position: 3675718
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3675916:-1
position: 3675916
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:3672265-3672370:-1:exon

position:3672265:-1
position: 3672265
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3672370:-1
position: 3672370
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:3668737-3668920:-1:exon

position:3668737:-1
position: 3668737
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3668920:-1
position: 3668920
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:3666457-3666537:-1:exon

position:3666457:-1
position: 3666457
reference: sequence
type: ReverseStrandPosition
type: ExactPosition