Litorivicinus lipolyticus strain IMCC 1097 chromosome, complete genome.
Bacteria; Pseudomonadota; Gammaproteobacteria; Oceanospirillales; Litorivicinaceae; Litorivicinus.
Submitted (05-NOV-2019) Life Science, Chung Ang University, 84, Heukseok-Ro Dongjak-Gu, Seoul 156-756, Korea, Republic of
REFSEQ INFORMATION: The reference sequence is identical to\nCP045871.1.\nThe annotation was added by the NCBI Prokaryotic Genome Annotation\nPipeline (PGAP). Information about PGAP can be found here:\nhttps://www.ncbi.nlm.nih.gov/genome/annotation_prok/\n\n##Genome-Assembly-Data-START##\nAssembly Date :: 04-NOV-2019\nAssembly Method :: Unicycler v. 0.4.7\nGenome Representation :: Full\nExpected Final Version :: Yes\nGenome Coverage :: 1750.0x\nSequencing Technology :: Illumina HiSeq; Oxford Nanopore MiniION\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI RefSeq\nAnnotation Date :: 02/06/2023 09:59:40\nAnnotation Pipeline :: NCBI Prokaryotic Genome\n Annotation Pipeline (PGAP)\nAnnotation Method :: Best-placed reference protein\n set; GeneMarkS-2+\nAnnotation Software revision :: 6.4\nFeatures Annotated :: Gene; CDS; rRNA; tRNA; ncRNA\nGenes (total) :: 2,407\nCDSs (total) :: 2,354\nGenes (coding) :: 2,339\nCDSs (with protein) :: 2,339\nGenes (RNA) :: 53\nrRNAs :: 3, 3, 3 (5S, 16S, 23S)\ncomplete rRNAs :: 3, 3, 3 (5S, 16S, 23S)\ntRNAs :: 40\nncRNAs :: 4\nPseudo Genes (total) :: 15\nCDSs (without protein) :: 15\nPseudo Genes (ambiguous residues) :: 0 of 15\nPseudo Genes (frameshifted) :: 2 of 15\nPseudo Genes (incomplete) :: 14 of 15\nPseudo Genes (internal stop) :: 2 of 15\nPseudo Genes (multiple problems) :: 2 of 15\n##Genome-Annotation-Data-END##\nCOMPLETENESS: full length.
type strain of Litorivicinus lipolyticus
COORDINATES: similar to AA sequence:RefSeq:WP_019815252.1
Derived by automated computational analysis using gene prediction method: Protein Homology.
branched-chain amino acid ABC transporter permease
COORDINATES: similar to AA sequence:RefSeq:WP_020288207.1
COORDINATES: similar to AA sequence:RefSeq:WP_019815248.1
COORDINATES: similar to AA sequence:RefSeq:WP_019815246.1
COORDINATES: similar to AA sequence:RefSeq:WP_019815254.1
ABC transporter substrate-binding protein
COORDINATES: protein motif:HMM:NF013530.2
GO:0003824 - catalytic activity [Evidence IEA]
NAD-dependent epimerase/dehydratase family protein
COORDINATES: protein motif:HMM:NF014068.2
COORDINATES: similar to AA sequence:RefSeq:WP_008959719.1
NAD-dependent succinate-semialdehyde dehydrogenase
COORDINATES: protein motif:HMM:NF013304.2
COORDINATES: ab initio prediction:GeneMarkS-2+
Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
COORDINATES: protein motif:HMM:NF014567.2
HAMP domain-containing sensor histidine kinase
COORDINATES: similar to AA sequence:RefSeq:WP_013662292.1
COORDINATES: protein motif:HMM:NF019430.2
GO:0042597 - periplasmic space [Evidence IEA]
Spy/CpxP family protein refolding chaperone
COORDINATES: protein motif:HMM:NF014896.2
GO:0008236 - serine-type peptidase activity [Evidence IEA]
prolyl oligopeptidase family serine peptidase
COORDINATES: protein motif:HMM:TIGR01198.1
GO:0017057 - 6-phosphogluconolactonase activity [Evidence IEA]
GO:0006098 - pentose-phosphate shunt [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_009835743.1
GO:0004345 - glucose-6-phosphate dehydrogenase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF024811.2
GO:0016787 - hydrolase activity [Evidence IEA]
GO:0008152 - metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_016913307.1
COORDINATES: protein motif:HMM:NF001033.0
GO:0051082 - unfolded protein binding [Evidence IEA]
GO:0006457 - protein folding [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR01434.1
GO:0004357 - glutamate-cysteine ligase activity [Evidence IEA]
GO:0006750 - glutathione biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF015693.2
flagellar basal body-associated FliL family protein
COORDINATES: similar to AA sequence:RefSeq:WP_014992864.1
COORDINATES: similar to AA sequence:RefSeq:WP_016855890.1
FKBP-type peptidyl-prolyl cis-trans isomerase
COORDINATES: protein motif:HMM:TIGR02444.1
COORDINATES: protein motif:HMM:NF012235.2
ATP-binding cassette domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_013662234.1
GO:0016780 - phosphotransferase activity, for other substituted phosphate groups [Evidence IEA]
GO:0008654 - phospholipid biosynthetic process [Evidence IEA]
CDP-alcohol phosphatidyltransferase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_013333408.1
COORDINATES: protein motif:HMM:NF012738.2
GO:0055085 - transmembrane transport [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_008041598.1
COORDINATES: similar to AA sequence:RefSeq:WP_013794677.1
GO:0016491 - oxidoreductase activity [Evidence IEA]
bifunctional TVP38/TMEM64 family protein/FAD-dependent oxidoreductase
COORDINATES: similar to AA sequence:RefSeq:WP_019950604.1
GO:0003824 - catalytic activity [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0004655 - porphobilinogen synthase activity [Evidence IEA]
GO:0033014 - tetrapyrrole biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_008073352.1
GO:0015035 - protein-disulfide reductase activity [Evidence IEA]
GO:0006662 - glycerol ether metabolic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF024139.2
helix-turn-helix domain-containing protein
COORDINATES: protein motif:HMM:NF024861.2
COORDINATES: protein motif:HMM:NF020390.2
COORDINATES: protein motif:HMM:NF019040.2
COORDINATES: protein motif:HMM:NF016064.2
COORDINATES: protein motif:HMM:NF019607.2
COORDINATES: similar to AA sequence:RefSeq:WP_012071652.1
GO:0008186 - ATP-dependent activity, acting on RNA [Evidence IEA]; GO:0004386 - helicase activity [Evidence IEA]
GO:0006353 - DNA-templated transcription termination [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_008927352.1
GO:0016831 - carboxy-lyase activity [Evidence IEA]
4-hydroxy-3-polyprenylbenzoate decarboxylase
COORDINATES: protein motif:HMM:TIGR00540.1
heme biosynthesis HemY N-terminal domain-containing protein
COORDINATES: protein motif:HMM:NF016275.2
uroporphyrinogen-III C-methyltransferase
COORDINATES: protein motif:HMM:NF014641.2
COORDINATES: similar to AA sequence:RefSeq:WP_007112305.1
GO:0004418 - hydroxymethylbilane synthase activity [Evidence IEA]
GO:0006779 - porphyrin-containing compound biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014996323.1
GO:0004056 - argininosuccinate lyase activity [Evidence IEA]
GO:0042450 - arginine biosynthetic process via ornithine [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_001080654.1
COORDINATES: similar to AA sequence:RefSeq:WP_007111004.1
nucleoside-diphosphate sugar epimerase/dehydratase
COORDINATES: similar to AA sequence:RefSeq:WP_010323334.1
COORDINATES: similar to AA sequence:RefSeq:WP_039026397.1
GO:0004803 - transposase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_003074457.1
GO:0003677 - DNA binding [Evidence IEA]; GO:0004803 - transposase activity [Evidence IEA]
GO:0006313 - transposition, DNA-mediated [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_076611494.1
GO:0015074 - DNA integration [Evidence IEA]
incomplete; partial in the middle of a contig; missing N-terminus and C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
integrase core domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_012519136.1
type II toxin-antitoxin system prevent-host-death family antitoxin
COORDINATES: similar to AA sequence:RefSeq:WP_005464459.1
COORDINATES: protein motif:HMM:NF025063.2
COORDINATES: similar to AA sequence:RefSeq:WP_010323333.1
COORDINATES: similar to AA sequence:RefSeq:WP_011978637.1
COORDINATES: protein motif:HMM:NF014893.2
COORDINATES: similar to AA sequence:RefSeq:WP_015703970.1
incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: protein motif:HMM:NF020419.2
nucleotidyl transferase AbiEii/AbiGii toxin family protein
COORDINATES: similar to AA sequence:RefSeq:WP_009722422.1
internal stop; incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: protein motif:HMM:NF012798.2
GO:0015074 - DNA integration [Evidence IEA]; GO:0006310 - DNA recombination [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_009096501.1
UDP-glucose/GDP-mannose dehydrogenase family protein
COORDINATES: protein motif:HMM:TIGR04176.1
MarR family EPS-associated transcriptional regulator
COORDINATES: protein motif:HMM:NF016311.2
3-deoxy-D-manno-octulosonic acid transferase
COORDINATES: protein motif:HMM:NF013434.2
COORDINATES: similar to AA sequence:RefSeq:WP_011589775.1
COORDINATES: similar to AA sequence:RefSeq:WP_015487315.1
COORDINATES: similar to AA sequence:RefSeq:WP_014993021.1
GO:0016779 - nucleotidyltransferase activity [Evidence IEA]
GO:0009058 - biosynthetic process [Evidence IEA]; GO:0005975 - carbohydrate metabolic process [Evidence IEA]
bifunctional D-glycero-beta-D-manno-heptose-7-phosphate kinase/D-glycero-beta-D-manno-heptose 1-phosphate adenylyltransferase HldE
COORDINATES: protein motif:HMM:NF015251.2
lysophospholipid acyltransferase family protein
COORDINATES: protein motif:HMM:NF016800.2
COORDINATES: protein motif:HMM:NF012744.2
COORDINATES: protein motif:HMM:NF024831.2
COORDINATES: similar to AA sequence:RefSeq:WP_013662402.1
COORDINATES: protein motif:HMM:NF012745.2
COORDINATES: similar to AA sequence:RefSeq:WP_019809291.1
GO:0008920 - lipopolysaccharide heptosyltransferase activity [Evidence IEA]
GO:0009244 - lipopolysaccharide core region biosynthetic process [Evidence IEA]
lipopolysaccharide heptosyltransferase I
COORDINATES: protein motif:HMM:TIGR02195.1
lipopolysaccharide heptosyltransferase II
COORDINATES: similar to AA sequence:RefSeq:WP_015485486.1
GO:0004084 - branched-chain-amino-acid transaminase activity [Evidence IEA]
GO:0009081 - branched-chain amino acid metabolic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF008292.0
GO:0008882 - [glutamate-ammonia-ligase] adenylyltransferase activity [Evidence IEA]
bifunctional [glutamate--ammonia ligase]-adenylyl-L-tyrosine phosphorylase/[glutamate--ammonia-ligase] adenylyltransferase
COORDINATES: protein motif:HMM:NF012652.2
COORDINATES: protein motif:HMM:NF014038.2
COORDINATES: similar to AA sequence:RefSeq:WP_013797242.1
GO:0019213 - deacetylase activity [Evidence IEA]
GO:0006526 - arginine biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF003641.0
GO:0004042 - acetyl-CoA:L-glutamate N-acetyltransferase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_007113381.1
GO:0004160 - dihydroxy-acid dehydratase activity [Evidence IEA]
GO:0009097 - isoleucine biosynthetic process [Evidence IEA]; GO:0009099 - valine biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF015678.2
COORDINATES: protein motif:HMM:NF012413.2
COORDINATES: similar to AA sequence:RefSeq:WP_011398010.1
COORDINATES: similar to AA sequence:RefSeq:WP_013331457.1
GO:0004799 - thymidylate synthase activity [Evidence IEA]
GO:0009265 - 2'-deoxyribonucleotide biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_005792329.1
GO:0008961 - phosphatidylglycerol-prolipoprotein diacylglyceryl transferase activity [Evidence IEA]
GO:0009249 - protein lipoylation [Evidence IEA]
prolipoprotein diacylglyceryl transferase
COORDINATES: similar to AA sequence:RefSeq:WP_011399568.1
sulfite exporter TauE/SafE family protein
COORDINATES: protein motif:HMM:NF017551.2
COORDINATES: similar to AA sequence:RefSeq:WP_010321578.1
phosphoenolpyruvate--protein phosphotransferase
COORDINATES: similar to AA sequence:RefSeq:WP_020410329.1
COORDINATES: protein motif:HMM:TIGR01490.1
COORDINATES: similar to AA sequence:RefSeq:WP_019952025.1
acetylornithine/succinyldiaminopimelate transaminase
COORDINATES: protein motif:HMM:NF039183.1
COORDINATES: similar to AA sequence:RefSeq:WP_020582204.1
COORDINATES: protein motif:HMM:NF013463.2
GO:0004016 - adenylate cyclase activity [Evidence IEA]
GO:0006171 - cAMP biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF015445.2
TRAP transporter substrate-binding protein DctP
COORDINATES: protein motif:HMM:NF016200.2
COORDINATES: protein motif:HMM:NF018513.2
GO:0005886 - plasma membrane [Evidence IEA]; GO:0031317 - tripartite ATP-independent periplasmic transporter complex [Evidence IEA]
GO:0015556 - C4-dicarboxylate transmembrane transporter activity [Evidence IEA]
GO:0015740 - C4-dicarboxylate transport [Evidence IEA]
COORDINATES: protein motif:HMM:NF015048.2
COORDINATES: similar to AA sequence:RefSeq:WP_020679635.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0003677 - DNA binding [Evidence IEA]; GO:0003678 - DNA helicase activity [Evidence IEA]; GO:0016787 - hydrolase activity [Evidence IEA]
GO:0006268 - DNA unwinding involved in DNA replication [Evidence IEA]
COORDINATES: protein motif:HMM:NF015551.2
GO:0042925 - benzoate transmembrane transporter activity [Evidence IEA]
GO:0042919 - benzoate transport [Evidence IEA]
benzoate/H(+) symporter BenE family transporter
COORDINATES: protein motif:HMM:NF002959.0
GO:0008080 - N-acetyltransferase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF015893.2
COORDINATES: similar to AA sequence:RefSeq:WP_016854225.1
GO:0004360 - glutamine-fructose-6-phosphate transaminase (isomerizing) activity [Evidence IEA]
GO:0006040 - amino sugar metabolic process [Evidence IEA]; GO:0009252 - peptidoglycan biosynthetic process [Evidence IEA]
glutamine--fructose-6-phosphate transaminase (isomerizing)
COORDINATES: similar to AA sequence:RefSeq:WP_015488460.1
GO:0019134 - glucosamine-1-phosphate N-acetyltransferase activity [Evidence IEA]; GO:0003977 - UDP-N-acetylglucosamine diphosphorylase activity [Evidence IEA]
GO:0009103 - lipopolysaccharide biosynthetic process [Evidence IEA]; GO:0009252 - peptidoglycan biosynthetic process [Evidence IEA]
bifunctional UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase GlmU
COORDINATES: protein motif:HMM:NF020496.2
COORDINATES: similar to AA sequence:RefSeq:WP_011400732.1
GO:0046933 - proton-transporting ATP synthase activity, rotational mechanism [Evidence IEA]
GO:0015986 - proton motive force-driven ATP synthesis [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_020679590.1
GO:0000275 - mitochondrial proton-transporting ATP synthase complex, catalytic sector F(1) [Evidence IEA]; GO:0045262 - plasma membrane proton-transporting ATP synthase complex, catalytic core F(1) [Evidence IEA]; GO:0045261 - proton-transporting ATP synthase complex, catalytic core F(1) [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_009834419.1
GO:0045261 - proton-transporting ATP synthase complex, catalytic core F(1) [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011508576.1
COORDINATES: protein motif:HMM:NF004402.0
COORDINATES: similar to AA sequence:RefSeq:WP_012072126.1
GO:0015078 - proton transmembrane transporter activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011498168.1
COORDINATES: similar to AA sequence:RefSeq:WP_011400739.1
GO:0045263 - proton-transporting ATP synthase complex, coupling factor F(o) [Evidence IEA]
COORDINATES: protein motif:HMM:NF015834.2
COORDINATES: protein motif:HMM:TIGR00180.1
GO:0007059 - chromosome segregation [Evidence IEA]; GO:0000910 - cytokinesis [Evidence IEA]
ParB/RepB/Spo0J family partition protein
COORDINATES: similar to AA sequence:RefSeq:WP_013663322.1
COORDINATES: protein motif:HMM:TIGR00138.1
GO:0005575 - cellular_component [Evidence IEA]
GO:0008168 - methyltransferase activity [Evidence IEA]
GO:0046118 - 7-methylguanosine biosynthetic process [Evidence IEA]; GO:0031167 - rRNA methylation [Evidence IEA]
16S rRNA (guanine(527)-N(7))-methyltransferase RsmG
COORDINATES: similar to AA sequence:RefSeq:WP_013798018.1
GO:0050660 - flavin adenine dinucleotide binding [Evidence IEA]
GO:0008033 - tRNA processing [Evidence IEA]; GO:0002098 - tRNA wobble uridine modification [Evidence IEA]
tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG
COORDINATES: similar to AA sequence:RefSeq:WP_013661904.1
COORDINATES: similar to AA sequence:RefSeq:WP_020679561.1
GO:0005525 - GTP binding [Evidence IEA]; GO:0003924 - GTPase activity [Evidence IEA]; GO:0005515 - protein binding [Evidence IEA]
GO:0006400 - tRNA modification [Evidence IEA]
tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE
COORDINATES: similar to AA sequence:RefSeq:WP_012072145.1
GO:0032977 - membrane insertase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF013932.2
membrane protein insertion efficiency factor YidD
COORDINATES: protein motif:HMM:NF013022.2
GO:0004526 - ribonuclease P activity [Evidence IEA]
GO:0006396 - RNA processing [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011508608.1
GO:0022625 - cytosolic large ribosomal subunit [Evidence IEA]; GO:0000315 - organellar large ribosomal subunit [Evidence IEA]
GO:0003735 - structural constituent of ribosome [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_007112186.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0003677 - DNA binding [Evidence IEA]; GO:0003688 - DNA replication origin binding [Evidence IEA]
GO:0006270 - DNA replication initiation [Evidence IEA]; GO:0006275 - regulation of DNA replication [Evidence IEA]
chromosomal replication initiator protein DnaA
COORDINATES: similar to AA sequence:RefSeq:WP_018918394.1
GO:0009360 - DNA polymerase III complex [Evidence IEA]
GO:0003887 - DNA-directed DNA polymerase activity [Evidence IEA]
GO:0006260 - DNA replication [Evidence IEA]
COORDINATES: protein motif:HMM:NF000819.0
GO:0005524 - ATP binding [Evidence IEA]; GO:0003697 - single-stranded DNA binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_016854179.1
GO:0009330 - DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) complex [Evidence IEA]
GO:0003918 - DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) activity [Evidence IEA]
GO:0006265 - DNA topological change [Evidence IEA]
DNA topoisomerase (ATP-hydrolyzing) subunit B
COORDINATES: similar to AA sequence:RefSeq:WP_011505316.1
GO:0016791 - phosphatase activity [Evidence IEA]
GO:0005975 - carbohydrate metabolic process [Evidence IEA]
D-glycero-beta-D-manno-heptose 1,7-bisphosphate 7-phosphatase
COORDINATES: protein motif:HMM:TIGR00211.2
GO:0009345 - glycine-tRNA ligase complex [Evidence IEA]
GO:0004820 - glycine-tRNA ligase activity [Evidence IEA]
GO:0006426 - glycyl-tRNA aminoacylation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_019621216.1
COORDINATES: similar to AA sequence:RefSeq:WP_013794558.1
GO:0015379 - potassium:chloride symporter activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_016855184.1
GO:0005886 - plasma membrane [Evidence IEA]
GO:0015079 - potassium ion transmembrane transporter activity [Evidence IEA]
GO:0006813 - potassium ion transport [Evidence IEA]
COORDINATES: protein motif:HMM:NF008149.0
GO:0003723 - RNA binding [Evidence IEA]; GO:0008649 - rRNA methyltransferase activity [Evidence IEA]
GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]; GO:0001510 - RNA methylation [Evidence IEA]; GO:0006364 - rRNA processing [Evidence IEA]
16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB
COORDINATES: similar to AA sequence:RefSeq:WP_018918149.1
GO:0004479 - methionyl-tRNA formyltransferase activity [Evidence IEA]
GO:0006431 - methionyl-tRNA aminoacylation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011508159.1
GO:0042586 - peptide deformylase activity [Evidence IEA]
GO:0036211 - protein modification process [Evidence IEA]
COORDINATES: protein motif:HMM:NF013630.2
LysM peptidoglycan-binding domain-containing protein
COORDINATES: protein motif:HMM:NF014533.2
COORDINATES: protein motif:HMM:NF013468.2
COORDINATES: similar to AA sequence:RefSeq:WP_011394034.1
GO:0004109 - coproporphyrinogen oxidase activity [Evidence IEA]
oxygen-dependent coproporphyrinogen oxidase
COORDINATES: similar to AA sequence:RefSeq:WP_016855175.1
GO:0004764 - shikimate 3-dehydrogenase (NADP+) activity [Evidence IEA]
GO:0019632 - shikimate metabolic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF004679.0
GO:0005524 - ATP binding [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0004638 - phosphoribosylaminoimidazole carboxylase activity [Evidence IEA]
GO:0006189 - 'de novo' IMP biosynthetic process [Evidence IEA]
5-(carboxyamino)imidazole ribonucleotide synthase
COORDINATES: protein motif:HMM:TIGR01162.1
GO:0009320 - phosphoribosylaminoimidazole carboxylase complex [Evidence IEA]
GO:0004638 - phosphoribosylaminoimidazole carboxylase activity [Evidence IEA]
GO:0009152 - purine ribonucleotide biosynthetic process [Evidence IEA]
5-(carboxyamino)imidazole ribonucleotide mutase
COORDINATES: similar to AA sequence:RefSeq:WP_019952065.1
COORDINATES: similar to AA sequence:RefSeq:WP_010324442.1
COORDINATES: similar to AA sequence:RefSeq:WP_008734315.1
GO:0004222 - metalloendopeptidase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011394043.1
YheV family putative zinc ribbon protein
COORDINATES: similar to AA sequence:RefSeq:WP_004627513.1
GO:0009636 - response to toxic substance [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00797.1
GO:0042910 - xenobiotic transmembrane transporter activity [Evidence IEA]
GO:0009410 - response to xenobiotic stimulus [Evidence IEA]; GO:0006855 - xenobiotic transmembrane transport [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_020034352.1
GO:0004129 - cytochrome-c oxidase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_020582196.1
COORDINATES: similar to AA sequence:RefSeq:WP_007021340.1
COORDINATES: similar to AA sequence:RefSeq:WP_009724281.1
COORDINATES: similar to AA sequence:RefSeq:WP_008092098.1
COORDINATES: protein motif:HMM:NF014193.2
COORDINATES: similar to AA sequence:RefSeq:WP_008048265.1
COORDINATES: similar to AA sequence:RefSeq:WP_019017562.1
GO:0008495 - protoheme IX farnesyltransferase activity [Evidence IEA]
GO:0006783 - heme biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF003558.0
GO:0004413 - homoserine kinase activity [Evidence IEA]
GO:0009088 - threonine biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013333758.1
GO:0008408 - 3'-5' exonuclease activity [Evidence IEA]; GO:0003677 - DNA binding [Evidence IEA]; GO:0003887 - DNA-directed DNA polymerase activity [Evidence IEA]; GO:0003676 - nucleic acid binding [Evidence IEA]
GO:0006261 - DNA-templated DNA replication [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_010324395.1
GO:0005525 - GTP binding [Evidence IEA]; GO:0003924 - GTPase activity [Evidence IEA]; GO:0043022 - ribosome binding [Evidence IEA]
GO:0042254 - ribosome biogenesis [Evidence IEA]
ribosome biogenesis GTP-binding protein YihA/YsxC
COORDINATES: similar to AA sequence:RefSeq:WP_019621302.1
GO:0009055 - electron transfer activity [Evidence IEA]; GO:0020037 - heme binding [Evidence IEA]
COORDINATES: protein motif:HMM:NF024853.2
thiol:disulfide interchange protein DsbA/DsbL
COORDINATES: similar to AA sequence:RefSeq:WP_007151566.1
GO:0003849 - 3-deoxy-7-phosphoheptulonate synthase activity [Evidence IEA]
GO:0009423 - chorismate biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF024809.2
COORDINATES: similar to AA sequence:RefSeq:WP_015485338.1
substrate-binding domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_018919087.1
GO:0055052 - ATP-binding cassette (ABC) transporter complex, substrate-binding subunit-containing [Evidence IEA]; GO:0005886 - plasma membrane [Evidence IEA]
GO:0015415 - ATPase-coupled phosphate ion transmembrane transporter activity [Evidence IEA]
phosphate ABC transporter permease subunit PstC
COORDINATES: similar to AA sequence:RefSeq:WP_008734696.1
COORDINATES: similar to AA sequence:RefSeq:WP_014996676.1
GO:0055052 - ATP-binding cassette (ABC) transporter complex, substrate-binding subunit-containing [Evidence IEA]; GO:0009898 - cytoplasmic side of plasma membrane [Evidence IEA]
GO:0005524 - ATP binding [Evidence IEA]; GO:0015415 - ATPase-coupled phosphate ion transmembrane transporter activity [Evidence IEA]
phosphate ABC transporter ATP-binding protein PstB
COORDINATES: protein motif:HMM:TIGR02135.1
GO:0003700 - DNA-binding transcription factor activity [Evidence IEA]
GO:0051049 - regulation of transport [Evidence IEA]
phosphate signaling complex protein PhoU
COORDINATES: protein motif:HMM:NF018917.2
GO:0015116 - sulfate transmembrane transporter activity [Evidence IEA]
GO:0000103 - sulfate assimilation [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR02966.1
GO:0000155 - phosphorelay sensor kinase activity [Evidence IEA]
GO:0006796 - phosphate-containing compound metabolic process [Evidence IEA]; GO:0000160 - phosphorelay signal transduction system [Evidence IEA]
phosphate regulon sensor histidine kinase PhoR
COORDINATES: similar to AA sequence:RefSeq:WP_011508543.1
GO:0003700 - DNA-binding transcription factor activity [Evidence IEA]; GO:0000156 - phosphorelay response regulator activity [Evidence IEA]
GO:0006796 - phosphate-containing compound metabolic process [Evidence IEA]; GO:0000160 - phosphorelay signal transduction system [Evidence IEA]; GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
phosphate regulon transcriptional regulator PhoB
COORDINATES: similar to AA sequence:RefSeq:WP_008044243.1
GO:0008412 - 4-hydroxybenzoate octaprenyltransferase activity [Evidence IEA]
GO:0006744 - ubiquinone biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF020252.2
COORDINATES: similar to AA sequence:RefSeq:WP_011400012.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0003678 - DNA helicase activity [Evidence IEA]; GO:0003676 - nucleic acid binding [Evidence IEA]
GO:0006310 - DNA recombination [Evidence IEA]; GO:0006281 - DNA repair [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_016915498.1
hydrogen peroxide-inducible genes activator
COORDINATES: similar to AA sequence:RefSeq:WP_011587472.1
COORDINATES: similar to AA sequence:RefSeq:WP_015485368.1
GO:0015969 - guanosine tetraphosphate metabolic process [Evidence IEA]; GO:0015968 - stringent response [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004899123.1
GO:0000345 - cytosolic DNA-directed RNA polymerase complex [Evidence IEA]
GO:0003899 - DNA-directed 5'-3' RNA polymerase activity [Evidence IEA]
GO:0006351 - DNA-templated transcription [Evidence IEA]
DNA-directed RNA polymerase subunit omega
COORDINATES: similar to AA sequence:RefSeq:WP_007018096.1
GO:0004385 - guanylate kinase activity [Evidence IEA]
GO:0015949 - nucleobase-containing small molecule interconversion [Evidence IEA]
COORDINATES: protein motif:HMM:NF012274.2
COORDINATES: similar to AA sequence:RefSeq:WP_008959048.1
GO:0004549 - tRNA-specific ribonuclease activity [Evidence IEA]
GO:0008033 - tRNA processing [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00633.1
COORDINATES: similar to AA sequence:RefSeq:WP_010625889.1
GO:0004588 - orotate phosphoribosyltransferase activity [Evidence IEA]
GO:0009220 - pyrimidine ribonucleotide biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013659709.1
GO:0003991 - acetylglutamate kinase activity [Evidence IEA]
GO:0006592 - ornithine biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF014877.2
COORDINATES: similar to AA sequence:RefSeq:WP_000976070.1
GO:0004170 - dUTP diphosphatase activity [Evidence IEA]; GO:0000287 - magnesium ion binding [Evidence IEA]
GO:0006226 - dUMP biosynthetic process [Evidence IEA]; GO:0046081 - dUTP catabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_019622528.1
GO:0004632 - phosphopantothenate--cysteine ligase activity [Evidence IEA]; GO:0004633 - phosphopantothenoylcysteine decarboxylase activity [Evidence IEA]
GO:0015937 - coenzyme A biosynthetic process [Evidence IEA]; GO:0015939 - pantothenate metabolic process [Evidence IEA]
bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase CoaBC
COORDINATES: protein motif:HMM:TIGR00608.1
COORDINATES: similar to AA sequence:RefSeq:WP_009834227.1
GO:0022625 - cytosolic large ribosomal subunit [Evidence IEA]; GO:0000311 - plastid large ribosomal subunit [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_009766925.1
COORDINATES: similar to AA sequence:RefSeq:WP_008959892.1
GO:0003684 - damaged DNA binding [Evidence IEA]; GO:0019104 - DNA N-glycosylase activity [Evidence IEA]; GO:0003906 - DNA-(apurinic or apyrimidinic site) endonuclease activity [Evidence IEA]; GO:0016799 - hydrolase activity, hydrolyzing N-glycosyl compounds [Evidence IEA]; GO:0003676 - nucleic acid binding [Evidence IEA]; GO:0008534 - oxidized purine nucleobase lesion DNA N-glycosylase activity [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA]
GO:0006284 - base-excision repair [Evidence IEA]; GO:0006281 - DNA repair [Evidence IEA]
bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase
COORDINATES: similar to AA sequence:RefSeq:WP_015485409.1
GO:0004595 - pantetheine-phosphate adenylyltransferase activity [Evidence IEA]
GO:0015937 - coenzyme A biosynthetic process [Evidence IEA]
pantetheine-phosphate adenylyltransferase
COORDINATES: protein motif:HMM:NF012770.2
COORDINATES: protein motif:HMM:TIGR00095.1
GO:0052913 - 16S rRNA (guanine(966)-N(2))-methyltransferase activity [Evidence IEA]
GO:0031167 - rRNA methylation [Evidence IEA]
16S rRNA (guanine(966)-N(2))-methyltransferase RsmD
COORDINATES: similar to AA sequence:RefSeq:WP_012071988.1
GO:0003924 - GTPase activity [Evidence IEA]; GO:0005047 - signal recognition particle binding [Evidence IEA]
GO:0009306 - protein secretion [Evidence IEA]
signal recognition particle-docking protein FtsY
COORDINATES: similar to AA sequence:RefSeq:WP_019621087.1
GO:0000910 - cytokinesis [Evidence IEA]; GO:0006810 - transport [Evidence IEA]
COORDINATES: protein motif:HMM:NF037183.2
permease-like cell division protein FtsX
COORDINATES: similar to AA sequence:RefSeq:WP_013797891.1
GO:0016987 - sigma factor activity [Evidence IEA]
GO:0006352 - DNA-templated transcription initiation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_020679478.1
GO:0008176 - tRNA (guanine-N7-)-methyltransferase activity [Evidence IEA]
tRNA (guanosine(46)-N7)-methyltransferase TrmB
COORDINATES: similar to AA sequence:RefSeq:WP_015488621.1
GO:0051989 - coproporphyrinogen dehydrogenase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_020679317.1
GO:0016462 - pyrophosphatase activity [Evidence IEA]
RdgB/HAM1 family non-canonical purine NTP pyrophosphatase
COORDINATES: protein motif:HMM:NF025822.2
COORDINATES: similar to AA sequence:RefSeq:WP_017431296.1
GO:0009086 - methionine biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014992591.1
GO:0016747 - acyltransferase activity, transferring groups other than amino-acyl groups [Evidence IEA]
GO:0009058 - biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF014389.2
COORDINATES: similar to AA sequence:RefSeq:WP_009287946.1
GO:0004735 - pyrroline-5-carboxylate reductase activity [Evidence IEA]
GO:0006561 - proline biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_008928791.1
GO:0030170 - pyridoxal phosphate binding [Evidence IEA]
YggS family pyridoxal phosphate-dependent enzyme
COORDINATES: similar to AA sequence:RefSeq:WP_005104787.1
type IV pilus twitching motility protein PilT
COORDINATES: similar to AA sequence:RefSeq:WP_008044384.1
GO:0043107 - type IV pilus-dependent motility [Evidence IEA]
COORDINATES: protein motif:HMM:NF024118.2
Catalyzes the reversible hydrolysis of the amide bond within dihydroorotate. This metabolic intermediate is required for the biosynthesis of pyrimidine nucleotides; Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
COORDINATES: similar to AA sequence:RefSeq:WP_007016681.1
GO:0016597 - amino acid binding [Evidence IEA]; GO:0004070 - aspartate carbamoyltransferase activity [Evidence IEA]
GO:0006207 - 'de novo' pyrimidine nucleobase biosynthetic process [Evidence IEA]; GO:0006520 - amino acid metabolic process [Evidence IEA]
aspartate carbamoyltransferase catalytic subunit
COORDINATES: similar to AA sequence:RefSeq:WP_000017096.1
GO:0003674 - molecular_function [Evidence IEA]
GO:0008150 - biological_process [Evidence IEA]
COORDINATES: protein motif:HMM:NF014659.2
COORDINATES: protein motif:HMM:NF024503.2
GO:0015291 - secondary active transmembrane transporter activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011394529.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0004363 - glutathione synthase activity [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]
COORDINATES: protein motif:HMM:NF008692.0
GO:0006364 - rRNA processing [Evidence IEA]
16S rRNA (uracil(1498)-N(3))-methyltransferase
COORDINATES: protein motif:HMM:NF013088.2
COORDINATES: protein motif:HMM:NF025637.2
COORDINATES: similar to AA sequence:RefSeq:WP_019019004.1
COORDINATES: similar to AA sequence:RefSeq:WP_009285859.1
COORDINATES: similar to AA sequence:RefSeq:WP_013795260.1
COORDINATES: similar to AA sequence:RefSeq:WP_013795261.1
COORDINATES: similar to AA sequence:RefSeq:WP_013804237.1
COORDINATES: protein motif:HMM:NF017135.2
COORDINATES: similar to AA sequence:RefSeq:WP_018917031.1
COORDINATES: protein motif:HMM:NF015131.2
COORDINATES: protein motif:HMM:NF019843.2
COORDINATES: similar to AA sequence:RefSeq:WP_013795429.1
COORDINATES: similar to AA sequence:RefSeq:WP_009834750.1
COORDINATES: similar to AA sequence:RefSeq:WP_020287307.1
COORDINATES: protein motif:HMM:NF013756.2
COORDINATES: similar to AA sequence:RefSeq:WP_020683818.1
COORDINATES: protein motif:HMM:NF012517.2
LLM class flavin-dependent oxidoreductase
COORDINATES: protein motif:HMM:NF019322.2
COORDINATES: similar to AA sequence:RefSeq:WP_020683820.1
COORDINATES: protein motif:HMM:NF015558.2
putative sulfate exporter family transporter
COORDINATES: protein motif:HMM:NF014671.2
formate dehydrogenase accessory sulfurtransferase FdhD
COORDINATES: protein motif:HMM:NF001459.0
GO:0006777 - Mo-molybdopterin cofactor biosynthetic process [Evidence IEA]
molybdenum cofactor guanylyltransferase MobA
COORDINATES: protein motif:HMM:TIGR00176.1
GO:0003824 - catalytic activity [Evidence IEA]; GO:0005525 - GTP binding [Evidence IEA]
molybdopterin-guanine dinucleotide biosynthesis protein B
COORDINATES: protein motif:HMM:NF015418.2
COORDINATES: protein motif:HMM:NF040448.1
COORDINATES: protein motif:HMM:NF028227.2
biotin/lipoate--protein ligase family protein
COORDINATES: protein motif:HMM:NF022077.2
COORDINATES: protein motif:HMM:NF024585.2
COORDINATES: protein motif:HMM:NF023177.2
COORDINATES: protein motif:HMM:NF023176.2
COORDINATES: protein motif:HMM:NF014651.2
COORDINATES: similar to AA sequence:RefSeq:WP_013908415.1
COORDINATES: similar to AA sequence:RefSeq:WP_007112726.1
GO:0009055 - electron transfer activity [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR01583.1
GO:0009326 - formate dehydrogenase complex [Evidence IEA]
GO:0009055 - electron transfer activity [Evidence IEA]; GO:0008863 - formate dehydrogenase (NAD+) activity [Evidence IEA]
GO:0009061 - anaerobic respiration [Evidence IEA]
COORDINATES: protein motif:HMM:NF013379.2
COORDINATES: similar to AA sequence:RefSeq:WP_009721903.1
COORDINATES: similar to AA sequence:RefSeq:WP_016913407.1
COORDINATES: protein motif:HMM:NF013324.2
COORDINATES: protein motif:HMM:NF008245.0
GO:0022857 - transmembrane transporter activity [Evidence IEA]
L-methionine/branched-chain amino acid transporter
COORDINATES: similar to AA sequence:RefSeq:WP_011395463.1
GO:0004013 - adenosylhomocysteinase activity [Evidence IEA]
GO:0006730 - one-carbon metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_009834565.1
GO:0004478 - methionine adenosyltransferase activity [Evidence IEA]
GO:0006556 - S-adenosylmethionine biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF022577.2
COORDINATES: similar to AA sequence:RefSeq:WP_007016611.1
GO:0004802 - transketolase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF014818.2
glyceraldehyde 3-phosphate dehydrogenase NAD-binding domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_007149926.1
COORDINATES: similar to AA sequence:RefSeq:WP_020679285.1
GO:0004332 - fructose-bisphosphate aldolase activity [Evidence IEA]
GO:0006096 - glycolytic process [Evidence IEA]
catalyzes the reversible aldol condensation of dihydroxyacetonephosphate and glyceraldehyde 3-phosphate in the Calvin cycle, glycolysis, and/or gluconeogenesis; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: protein motif:HMM:NF023568.2
COORDINATES: similar to AA sequence:RefSeq:WP_019620947.1
GO:0051287 - NAD binding [Evidence IEA]; GO:0016616 - oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_007021444.1
GO:0004751 - ribose-5-phosphate isomerase activity [Evidence IEA]
GO:0009052 - pentose-phosphate shunt, non-oxidative branch [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_019809071.1
GO:0004794 - L-threonine ammonia-lyase activity [Evidence IEA]
GO:0009097 - isoleucine biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF015642.2
COORDINATES: protein motif:HMM:NF017016.2
COORDINATES: nucleotide motif:Rfam:14.4:RF00013
Derived by automated computational analysis using gene prediction method: cmsearch.
COORDINATES: protein motif:HMM:TIGR02727.1
GO:0030272 - 5-formyltetrahydrofolate cyclo-ligase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_007021506.1
GO:0015628 - protein secretion by the type II secretion system [Evidence IEA]
twin-arginine translocase TatA/TatE family subunit
COORDINATES: similar to AA sequence:RefSeq:WP_020288584.1
COORDINATES: similar to AA sequence:RefSeq:WP_020288585.1
COORDINATES: similar to AA sequence:RefSeq:WP_020288586.1
COORDINATES: similar to AA sequence:RefSeq:WP_020288587.1
COORDINATES: similar to AA sequence:RefSeq:WP_020288590.1
COORDINATES: similar to AA sequence:RefSeq:WP_010324386.1
COORDINATES: similar to AA sequence:RefSeq:WP_016853477.1
GO:0015628 - protein secretion by the type II secretion system [Evidence IEA]; GO:0015031 - protein transport [Evidence IEA]
Sec-independent protein translocase protein TatB
COORDINATES: similar to AA sequence:RefSeq:WP_010324388.1
COORDINATES: similar to AA sequence:RefSeq:WP_020679646.1
histidine triad nucleotide-binding protein
COORDINATES: similar to AA sequence:RefSeq:NP_253754.1
GO:0004636 - phosphoribosyl-ATP diphosphatase activity [Evidence IEA]
GO:0000105 - histidine biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_008733534.1
GO:0004635 - phosphoribosyl-AMP cyclohydrolase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013333529.1
ubiquinone biosynthesis regulatory protein kinase UbiB
COORDINATES: protein motif:HMM:NF014132.2
SCP2 sterol-binding domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_013662589.1
GO:0052624 - 2-phytyl-1,4-naphthoquinone methyltransferase activity [Evidence IEA]
GO:0042372 - phylloquinone biosynthetic process [Evidence IEA]
bifunctional demethylmenaquinone methyltransferase/2-methoxy-6-polyprenyl-1,4-benzoquinol methylase UbiE
COORDINATES: similar to AA sequence:RefSeq:WP_015488305.1
COORDINATES: similar to AA sequence:RefSeq:WP_017429609.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0016887 - ATP hydrolysis activity [Evidence IEA]; GO:0008233 - peptidase activity [Evidence IEA]
ATP-dependent protease ATPase subunit HslU
COORDINATES: similar to AA sequence:RefSeq:WP_007150844.1
GO:0004298 - threonine-type endopeptidase activity [Evidence IEA]
GO:0051603 - proteolysis involved in protein catabolic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF016895.2
GO:0042834 - peptidoglycan binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_010324713.1
GO:0004814 - arginine-tRNA ligase activity [Evidence IEA]
GO:0006420 - arginyl-tRNA aminoacylation [Evidence IEA]
COORDINATES: protein motif:HMM:NF004067.0
GO:0005658 - alpha DNA polymerase:primase complex [Evidence IEA]
GO:0003678 - DNA helicase activity [Evidence IEA]; GO:0003688 - DNA replication origin binding [Evidence IEA]; GO:0016818 - hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_007021284.1
COORDINATES: similar to AA sequence:RefSeq:WP_013797716.1
malic enzyme-like NAD(P)-binding protein
COORDINATES: protein motif:HMM:TIGR02074.1
COORDINATES: similar to AA sequence:RefSeq:WP_015488346.1
COORDINATES: protein motif:HMM:NF016992.2
COORDINATES: similar to AA sequence:RefSeq:WP_020681982.1
GO:0043683 - type IV pilus assembly [Evidence IEA]; GO:0043107 - type IV pilus-dependent motility [Evidence IEA]
COORDINATES: protein motif:HMM:NF016254.2
COORDINATES: protein motif:HMM:TIGR02515.1
GO:0009297 - pilus assembly [Evidence IEA]; GO:0009306 - protein secretion [Evidence IEA]
COORDINATES: protein motif:HMM:NF013375.2
COORDINATES: similar to AA sequence:RefSeq:WP_010324701.1
GO:0003856 - 3-dehydroquinate synthase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011399674.1
GO:0003824 - catalytic activity [Evidence IEA]; GO:0015930 - glutamate synthase activity [Evidence IEA]; GO:0016491 - oxidoreductase activity [Evidence IEA]
GO:0006537 - glutamate biosynthetic process [Evidence IEA]; GO:0006807 - nitrogen compound metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_018918051.1
COORDINATES: similar to AA sequence:RefSeq:WP_020681969.1
GO:0004853 - uroporphyrinogen decarboxylase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_020682596.1
GO:0008408 - 3'-5' exonuclease activity [Evidence IEA]; GO:0003887 - DNA-directed DNA polymerase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF024731.2
COORDINATES: protein motif:HMM:NF016280.2
COORDINATES: similar to AA sequence:RefSeq:NP_253975.1
GO:0030234 - enzyme regulator activity [Evidence IEA]
GO:0006808 - regulation of nitrogen utilization [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_010324570.1
COORDINATES: protein motif:HMM:NF022694.2
COORDINATES: similar to AA sequence:RefSeq:WP_013334015.1
COORDINATES: protein motif:HMM:NF016243.2
COORDINATES: similar to AA sequence:RefSeq:WP_013795250.1
GO:0008837 - diaminopimelate epimerase activity [Evidence IEA]
GO:0009089 - lysine biosynthetic process via diaminopimelate [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_016855867.1
GO:0008836 - diaminopimelate decarboxylase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF025012.2
COORDINATES: protein motif:HMM:TIGR00254.1
COORDINATES: protein motif:HMM:TIGR01844.1
GO:0009279 - cell outer membrane [Evidence IEA]
GO:0015288 - porin activity [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00052.1
COORDINATES: protein motif:HMM:NF018552.2
COORDINATES: protein motif:HMM:NF023274.2
COORDINATES: protein motif:HMM:NF022137.2
class I SAM-dependent rRNA methyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_007018199.1
GO:0009340 - DNA topoisomerase IV complex [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_020682887.1
COORDINATES: protein motif:HMM:TIGR00338.1
GO:0036424 - L-phosphoserine phosphatase activity [Evidence IEA]
GO:0006564 - L-serine biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF012772.2
COORDINATES: similar to AA sequence:RefSeq:WP_008958607.1
GO:0003746 - translation elongation factor activity [Evidence IEA]
GO:0006414 - translational elongation [Evidence IEA]
COORDINATES: protein motif:HMM:NF012379.2
GO:0005524 - ATP binding [Evidence IEA]; GO:0004824 - lysine-tRNA ligase activity [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]
GO:0006430 - lysyl-tRNA aminoacylation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_020407602.1
GO:0022627 - cytosolic small ribosomal subunit [Evidence IEA]; GO:0000314 - organellar small ribosomal subunit [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012071134.1
COORDINATES: similar to AA sequence:RefSeq:WP_005134442.1
COORDINATES: similar to AA sequence:RefSeq:WP_019622680.1
GO:0004609 - phosphatidylserine decarboxylase activity [Evidence IEA]
Phosphatidylserine decarboxylase is synthesized as a single chain precursor. Generation of the pyruvoyl active site from a Ser is coupled to cleavage of a Gly-Ser bond between the larger (beta) and smaller (alpha chains). It is an integral membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: protein motif:HMM:TIGR00157.1
GO:0005525 - GTP binding [Evidence IEA]; GO:0043022 - ribosome binding [Evidence IEA]
ribosome small subunit-dependent GTPase A
GO:0009975 - cyclase activity [Evidence IEA]
GO:0009966 - regulation of signal transduction [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_007022956.1
GO:0000175 - 3'-5'-exoribonuclease activity [Evidence IEA]; GO:0003676 - nucleic acid binding [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00276.1
GO:0051539 - 4 iron, 4 sulfur cluster binding [Evidence IEA]; GO:0052693 - epoxyqueuosine reductase activity [Evidence IEA]
GO:0008616 - queuosine biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00150.1
GO:0016887 - ATP hydrolysis activity [Evidence IEA]
tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE
COORDINATES: protein motif:HMM:NF013670.2
GO:0008745 - N-acetylmuramoyl-L-alanine amidase activity [Evidence IEA]
GO:0009253 - peptidoglycan catabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_007149053.1
GO:0006298 - mismatch repair [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_019017248.1
GO:0052381 - tRNA dimethylallyltransferase activity [Evidence IEA]
tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA
COORDINATES: protein motif:HMM:NF009314.0
GO:0051139 - metal cation:proton antiporter activity [Evidence IEA]
GO:0098662 - inorganic cation transmembrane transport [Evidence IEA]; GO:1902600 - proton transmembrane transport [Evidence IEA]
monovalent cation/H(+) antiporter subunit G
COORDINATES: similar to AA sequence:RefSeq:WP_000370509.1
GO:0015075 - monoatomic ion transmembrane transporter activity [Evidence IEA]
GO:0034220 - monoatomic ion transmembrane transport [Evidence IEA]
monovalent cation/H+ antiporter complex subunit F
COORDINATES: protein motif:HMM:NF014012.2
COORDINATES: protein motif:HMM:NF012581.2
proton-conducting transporter membrane subunit
COORDINATES: similar to AA sequence:RefSeq:WP_005363584.1
COORDINATES: protein motif:HMM:NF015970.2
COORDINATES: protein motif:HMM:NF012673.2
3'(2'),5'-bisphosphate nucleotidase CysQ
COORDINATES: protein motif:HMM:NF015509.2
COORDINATES: similar to AA sequence:RefSeq:WP_020287705.1
GO:0004019 - adenylosuccinate synthase activity [Evidence IEA]; GO:0005525 - GTP binding [Evidence IEA]
GO:0006164 - purine nucleotide biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF009086.0
ATP phosphoribosyltransferase regulatory subunit
COORDINATES: protein motif:HMM:NF012314.2
GO:0015036 - disulfide oxidoreductase activity [Evidence IEA]
GGDEF domain-containing response regulator
COORDINATES: similar to AA sequence:RefSeq:WP_008046265.1
GO:0005515 - protein binding [Evidence IEA]
GO:0006457 - protein folding [Evidence IEA]; GO:0009408 - response to heat [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_007018491.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0016887 - ATP hydrolysis activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_007021934.1
GO:0000774 - adenyl-nucleotide exchange factor activity [Evidence IEA]; GO:0051087 - chaperone binding [Evidence IEA]; GO:0042803 - protein homodimerization activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_009097386.1
GO:0005951 - carbamoyl-phosphate synthase complex [Evidence IEA]
GO:0004088 - carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity [Evidence IEA]
glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit
COORDINATES: similar to AA sequence:RefSeq:WP_020405520.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]
GO:0006807 - nitrogen compound metabolic process [Evidence IEA]
carbamoyl-phosphate synthase large subunit
COORDINATES: similar to AA sequence:RefSeq:WP_012068865.1
GO:0008839 - 4-hydroxy-tetrahydrodipicolinate reductase [Evidence IEA]
4-hydroxy-tetrahydrodipicolinate reductase
COORDINATES: protein motif:HMM:NF014573.2
COORDINATES: protein motif:HMM:TIGR01428.1
GO:0018784 - (S)-2-haloacid dehalogenase activity [Evidence IEA]
GO:0006805 - xenobiotic metabolic process [Evidence IEA]
Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
COORDINATES: protein motif:HMM:NF013335.2
COORDINATES: similar to AA sequence:RefSeq:WP_007149004.1
COORDINATES: similar to AA sequence:RefSeq:WP_016855913.1
bifunctional diguanylate cyclase/phosphodiesterase
COORDINATES: protein motif:HMM:NF033429.2
GO:0051782 - negative regulation of cell division [Evidence IEA]; GO:0009432 - SOS response [Evidence IEA]
translesion DNA synthesis-associated protein ImuA
COORDINATES: similar to AA sequence:RefSeq:WP_009095976.1
GO:0004743 - pyruvate kinase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF022853.2
protein-disulfide reductase DsbD family protein
COORDINATES: protein motif:HMM:NF012787.2
COORDINATES: protein motif:HMM:NF013577.2
MurR/RpiR family transcriptional regulator
COORDINATES: similar to AA sequence:RefSeq:WP_019811142.1
COORDINATES: similar to AA sequence:RefSeq:WP_009724397.1
GO:0010181 - FMN binding [Evidence IEA]; GO:0004733 - pyridoxamine-phosphate oxidase activity [Evidence IEA]
GO:0008615 - pyridoxine biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_020580464.1
COORDINATES: protein motif:HMM:NF013488.2
2-hydroxychromene-2-carboxylate isomerase
COORDINATES: protein motif:HMM:NF014035.2
COORDINATES: similar to AA sequence:RefSeq:WP_010629654.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0003677 - DNA binding [Evidence IEA]; GO:0003678 - DNA helicase activity [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00492.1
GO:0008784 - alanine racemase activity [Evidence IEA]
GO:0009252 - peptidoglycan biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF021360.2
COORDINATES: similar to AA sequence:RefSeq:WP_013797956.1
amino acid ABC transporter substrate-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_018916863.1
COORDINATES: similar to AA sequence:RefSeq:WP_011399519.1
COORDINATES: similar to AA sequence:RefSeq:WP_010625819.1
amino acid ABC transporter ATP-binding protein
COORDINATES: protein motif:HMM:TIGR02063.1
GO:0008997 - ribonuclease R activity [Evidence IEA]
GO:0006401 - RNA catabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011506190.1
GO:0008173 - RNA methyltransferase activity [Evidence IEA]
GO:0009451 - RNA modification [Evidence IEA]
23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB
COORDINATES: similar to AA sequence:RefSeq:WP_020410288.1
GO:0140110 - transcription regulator activity [Evidence IEA]
GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_008733455.1
GO:0008703 - 5-amino-6-(5-phosphoribosylamino)uracil reductase activity [Evidence IEA]; GO:0008835 - diaminohydroxyphosphoribosylaminopyrimidine deaminase activity [Evidence IEA]
bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD
COORDINATES: similar to AA sequence:RefSeq:WP_008733457.1
GO:0008686 - 3,4-dihydroxy-2-butanone-4-phosphate synthase activity [Evidence IEA]; GO:0003935 - GTP cyclohydrolase II activity [Evidence IEA]
bifunctional 3,4-dihydroxy-2-butanone-4-phosphate synthase/GTP cyclohydrolase II
COORDINATES: similar to AA sequence:RefSeq:WP_013659702.1
GO:0009349 - riboflavin synthase complex [Evidence IEA]
GO:0000906 - 6,7-dimethyl-8-ribityllumazine synthase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_008733467.1
transcription antitermination factor NusB
COORDINATES: similar to AA sequence:RefSeq:WP_010323455.1
COORDINATES: protein motif:HMM:TIGR02281.1
GO:0004190 - aspartic-type endopeptidase activity [Evidence IEA]
TIGR02281 family clan AA aspartic protease
COORDINATES: similar to AA sequence:RefSeq:WP_020581092.1
GO:0003935 - GTP cyclohydrolase II activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_016915394.1
GO:0008661 - 1-deoxy-D-xylulose-5-phosphate synthase activity [Evidence IEA]
GO:0009240 - isopentenyl diphosphate biosynthetic process [Evidence IEA]; GO:0008615 - pyridoxine biosynthetic process [Evidence IEA]; GO:0009228 - thiamine biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF012568.2
COORDINATES: similar to AA sequence:RefSeq:WP_005125145.1
GO:0009318 - exodeoxyribonuclease VII complex [Evidence IEA]
GO:0008855 - exodeoxyribonuclease VII activity [Evidence IEA]
GO:0006308 - DNA catabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_020409329.1
COORDINATES: protein motif:HMM:NF006508.0
COORDINATES: similar to AA sequence:RefSeq:WP_016854691.1
GO:0009331 - glycerol-3-phosphate dehydrogenase complex [Evidence IEA]
GO:0004368 - glycerol-3-phosphate dehydrogenase (quinone) activity [Evidence IEA]
GO:0006072 - glycerol-3-phosphate metabolic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF012669.2
COORDINATES: protein motif:HMM:NF013618.2
lytic transglycosylase domain-containing protein
COORDINATES: protein motif:HMM:TIGR01777.1
COORDINATES: similar to AA sequence:RefSeq:WP_010321855.1
GO:0051537 - 2 iron, 2 sulfur cluster binding [Evidence IEA]; GO:0051539 - 4 iron, 4 sulfur cluster binding [Evidence IEA]; GO:0004076 - biotin synthase activity [Evidence IEA]; GO:1904047 - S-adenosyl-L-methionine binding [Evidence IEA]
GO:0009102 - biotin biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF012382.2
COORDINATES: protein motif:HMM:NF024109.2
COORDINATES: protein motif:HMM:NF019846.2
methyltransferase domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_010321851.1
GO:0004141 - dethiobiotin synthase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF012515.2
COORDINATES: similar to AA sequence:RefSeq:WP_012367734.1
COORDINATES: protein motif:HMM:NF013867.2
GO:0000156 - phosphorelay response regulator activity [Evidence IEA]; GO:0008984 - protein-glutamate methylesterase activity [Evidence IEA]
GO:0006935 - chemotaxis [Evidence IEA]; GO:0000160 - phosphorelay signal transduction system [Evidence IEA]
COORDINATES: protein motif:HMM:NF012301.2
COORDINATES: protein motif:HMM:NF019615.2
GO:0008757 - S-adenosylmethionine-dependent methyltransferase activity [Evidence IEA]
tRNA 5-methoxyuridine(34)/uridine 5-oxyacetic acid(34) synthase CmoB
COORDINATES: protein motif:HMM:TIGR00740.1
carboxy-S-adenosyl-L-methionine synthase CmoA
COORDINATES: protein motif:HMM:NF012245.2
GO:0007165 - signal transduction [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_006312579.1
GO:0009055 - electron transfer activity [Evidence IEA]; GO:0051536 - iron-sulfur cluster binding [Evidence IEA]
2Fe-2S iron-sulfur cluster-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_020681074.1
GO:0003858 - 3-hydroxybutyrate dehydrogenase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_008734604.1
COORDINATES: similar to AA sequence:RefSeq:WP_007021693.1
COORDINATES: similar to AA sequence:RefSeq:NP_415798.2
COORDINATES: similar to AA sequence:RefSeq:WP_009097391.1
GO:0003677 - DNA binding [Evidence IEA]; GO:0070063 - RNA polymerase binding [Evidence IEA]
GO:0032784 - regulation of DNA-templated transcription elongation [Evidence IEA]
COORDINATES: protein motif:HMM:NF008121.0
COORDINATES: similar to AA sequence:RefSeq:WP_019952552.1
COORDINATES: similar to AA sequence:RefSeq:WP_020582381.1
GO:0016436 - rRNA (uridine) methyltransferase activity [Evidence IEA]
GO:0001510 - RNA methylation [Evidence IEA]; GO:0006364 - rRNA processing [Evidence IEA]
23S rRNA (uridine(2552)-2'-O)-methyltransferase RlmE
COORDINATES: similar to AA sequence:RefSeq:WP_009097397.1
GO:0016887 - ATP hydrolysis activity [Evidence IEA]; GO:0004222 - metalloendopeptidase activity [Evidence IEA]
GO:0051301 - cell division [Evidence IEA]; GO:0006508 - proteolysis [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_019810245.1
GO:0004156 - dihydropteroate synthase activity [Evidence IEA]
GO:0009396 - folic acid-containing compound biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_016915920.1
GO:0016868 - intramolecular transferase activity, phosphotransferases [Evidence IEA]; GO:0000287 - magnesium ion binding [Evidence IEA]; GO:0008966 - phosphoglucosamine mutase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_007021185.1
GO:0004807 - triose-phosphate isomerase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013797348.1
GO:0015450 - protein-transporting ATPase activity [Evidence IEA]
GO:0043952 - protein transport by the Sec complex [Evidence IEA]
COORDINATES: protein motif:HMM:NF017081.2
COORDINATES: protein motif:HMM:NF014698.2
COORDINATES: protein motif:HMM:NF013757.2
COORDINATES: similar to AA sequence:RefSeq:WP_017529323.1
GO:0009436 - glyoxylate catabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_020405627.1
COORDINATES: similar to AA sequence:RefSeq:WP_020682652.1
GO:0008679 - 2-hydroxy-3-oxopropionate reductase activity [Evidence IEA]
GO:0019580 - galactarate metabolic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF025042.2
COORDINATES: protein motif:HMM:NF012385.2
sigma-54 dependent transcriptional regulator
COORDINATES: similar to AA sequence:RefSeq:WP_013797391.1
GO:0030288 - outer membrane-bounded periplasmic space [Evidence IEA]; GO:0031317 - tripartite ATP-independent periplasmic transporter complex [Evidence IEA]
GO:0005488 - binding [Evidence IEA]; GO:0005215 - transporter activity [Evidence IEA]
DctP family TRAP transporter solute-binding subunit
COORDINATES: similar to AA sequence:RefSeq:WP_020682408.1
COORDINATES: similar to AA sequence:RefSeq:WP_020286370.1
COORDINATES: protein motif:HMM:NF002636.0
GO:0003999 - adenine phosphoribosyltransferase activity [Evidence IEA]
GO:0009116 - nucleoside metabolic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF017269.2
GO:0019867 - outer membrane [Evidence IEA]
glycine zipper 2TM domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_008737204.1
COORDINATES: similar to AA sequence:RefSeq:WP_013797347.1
GO:0042274 - ribosomal small subunit biogenesis [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_019810240.1
COORDINATES: similar to AA sequence:RefSeq:WP_011587625.1
GO:0003743 - translation initiation factor activity [Evidence IEA]
GO:0006413 - translational initiation [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00082.1
GO:0019843 - rRNA binding [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00431.1
GO:0004730 - pseudouridylate synthase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012068748.1
COORDINATES: similar to AA sequence:RefSeq:WP_011508360.1
GO:0004654 - polyribonucleotide nucleotidyltransferase activity [Evidence IEA]
GO:0006402 - mRNA catabolic process [Evidence IEA]
polyribonucleotide nucleotidyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_008733109.1
COORDINATES: similar to AA sequence:RefSeq:WP_020682929.1
type II toxin-antitoxin system RatA family toxin
COORDINATES: similar to AA sequence:RefSeq:WP_016915901.1
COORDINATES: protein motif:HMM:NF018563.2
pyrimidine/purine nucleoside phosphorylase
COORDINATES: nucleotide motif:Rfam:14.4:RF00023
COORDINATES: similar to AA sequence:RefSeq:WP_005006007.1
GO:0000160 - phosphorelay signal transduction system [Evidence IEA]
COORDINATES: protein motif:HMM:NF014653.2
COORDINATES: similar to AA sequence:RefSeq:WP_015488053.1
COORDINATES: similar to AA sequence:RefSeq:WP_009723867.1
COORDINATES: similar to AA sequence:RefSeq:WP_020680292.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0003676 - nucleic acid binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013333005.1
COORDINATES: similar to AA sequence:RefSeq:WP_007016781.1
COORDINATES: similar to AA sequence:RefSeq:WP_020287128.1
COORDINATES: similar to AA sequence:RefSeq:WP_011399617.1
GO:0003852 - 2-isopropylmalate synthase activity [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR01575.1
GO:0008999 - peptide-alanine-alpha-N-acetyltransferase activity [Evidence IEA]
GO:0036211 - protein modification process [Evidence IEA]; GO:0042254 - ribosome biogenesis [Evidence IEA]
ribosomal protein S18-alanine N-acetyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_020682835.1
COORDINATES: similar to AA sequence:RefSeq:WP_019811406.1
cyclic pyranopterin monophosphate synthase MoaC
COORDINATES: protein motif:HMM:NF014636.2
COORDINATES: protein motif:HMM:NF014448.2
molybdenum cofactor biosynthesis protein MoaE
COORDINATES: similar to AA sequence:RefSeq:WP_011507217.1
molybdenum cofactor biosynthesis protein B
COORDINATES: protein motif:HMM:NF013183.2
COORDINATES: similar to AA sequence:RefSeq:WP_019622507.1
COORDINATES: protein motif:HMM:NF012670.2
COORDINATES: similar to AA sequence:RefSeq:WP_002060133.1
COORDINATES: similar to AA sequence:RefSeq:WP_009288166.1
COORDINATES: protein motif:HMM:NF015431.2
COORDINATES: similar to AA sequence:RefSeq:WP_020585175.1
COORDINATES: protein motif:HMM:NF022606.2
COORDINATES: similar to AA sequence:RefSeq:WP_019017809.1
COORDINATES: similar to AA sequence:RefSeq:WP_011506447.1
COORDINATES: protein motif:HMM:NF015549.2
COORDINATES: protein motif:HMM:NF017273.2
COORDINATES: protein motif:HMM:NF015682.2
COORDINATES: protein motif:HMM:NF024771.2
mandelate racemase/muconate lactonizing enzyme family protein
COORDINATES: protein motif:HMM:NF024950.2
SDR family NAD(P)-dependent oxidoreductase
COORDINATES: protein motif:HMM:NF015411.2
COORDINATES: similar to AA sequence:RefSeq:WP_019815472.1
dihydrodipicolinate synthase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_013332564.1
fumarylacetoacetate hydrolase family protein
COORDINATES: protein motif:HMM:NF012607.2
COORDINATES: protein motif:HMM:NF028206.2
phosphogluconate dehydrogenase C-terminal domain-containing protein
COORDINATES: protein motif:HMM:NF018682.2
four-carbon acid sugar kinase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_019019343.1
ribulose-bisphosphate carboxylase large subunit family protein
pyridoxal phosphate-dependent aminotransferase
COORDINATES: protein motif:HMM:NF013567.2
COORDINATES: similar to AA sequence:RefSeq:WP_019017535.1
COORDINATES: protein motif:HMM:NF019349.2
TRAP transporter substrate-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_013330807.1
COORDINATES: similar to AA sequence:RefSeq:WP_010625865.1
COORDINATES: similar to AA sequence:RefSeq:WP_013662920.1
COORDINATES: similar to AA sequence:RefSeq:WP_010629953.1
COORDINATES: similar to AA sequence:RefSeq:WP_019019331.1
COORDINATES: similar to AA sequence:RefSeq:WP_019951103.1
COORDINATES: protein motif:HMM:NF028222.2
COORDINATES: similar to AA sequence:RefSeq:WP_019019715.1
COORDINATES: similar to AA sequence:RefSeq:WP_019019716.1
GO:0019516 - lactate oxidation [Evidence IEA]
LutB/LldF family L-lactate oxidation iron-sulfur protein
COORDINATES: similar to AA sequence:RefSeq:WP_011395211.1
COORDINATES: similar to AA sequence:RefSeq:WP_013796183.1
GO:0045250 - cytosolic pyruvate dehydrogenase complex [Evidence IEA]
GO:0004738 - pyruvate dehydrogenase activity [Evidence IEA]
GO:0006086 - acetyl-CoA biosynthetic process from pyruvate [Evidence IEA]
pyruvate dehydrogenase (acetyl-transferring), homodimeric type
COORDINATES: similar to AA sequence:RefSeq:WP_019623349.1
GO:0045254 - pyruvate dehydrogenase complex [Evidence IEA]
GO:0004742 - dihydrolipoyllysine-residue acetyltransferase activity [Evidence IEA]
dihydrolipoyllysine-residue acetyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_004749690.1
GO:0008817 - corrinoid adenosyltransferase activity [Evidence IEA]
GO:0009236 - cobalamin biosynthetic process [Evidence IEA]
cob(I)yrinic acid a,c-diamide adenosyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_020679830.1
COORDINATES: similar to AA sequence:RefSeq:WP_019619934.1
COORDINATES: protein motif:HMM:NF016102.2
COORDINATES: similar to AA sequence:RefSeq:NP_253076.1
COORDINATES: similar to AA sequence:RefSeq:WP_020405680.1
GO:0016887 - ATP hydrolysis activity [Evidence IEA]; GO:0005515 - protein binding [Evidence IEA]
60 kDa chaperone family; promotes refolding of misfolded polypeptides especially under stressful conditions; forms two stacked rings of heptamers to form a barrel-shaped 14mer; ends can be capped by GroES; misfolded proteins enter the barrel where they are refolded when GroES binds; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_009835966.1
GO:0046872 - metal ion binding [Evidence IEA]; GO:0004784 - superoxide dismutase activity [Evidence IEA]
GO:0006801 - superoxide metabolic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF016197.2
COORDINATES: similar to AA sequence:RefSeq:WP_013663146.1
COORDINATES: protein motif:HMM:NF015319.2
GO:0008725 - DNA-3-methyladenine glycosylase activity [Evidence IEA]
GO:0006284 - base-excision repair [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00765.1
YihY/virulence factor BrkB family protein
COORDINATES: similar to AA sequence:RefSeq:WP_019018756.1
nucleobase:cation symporter-2 family protein
COORDINATES: similar to AA sequence:RefSeq:WP_009833438.1
COORDINATES: protein motif:HMM:TIGR02961.1
GO:0004037 - allantoicase activity [Evidence IEA]
GO:0000256 - allantoin catabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011505377.1
GO:0019628 - urate catabolic process [Evidence IEA]
2-oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline decarboxylase
COORDINATES: similar to AA sequence:RefSeq:WP_016855754.1
GO:0016810 - hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds [Evidence IEA]
COORDINATES: protein motif:HMM:NF017945.2
COORDINATES: similar to AA sequence:RefSeq:WP_007113780.1
COORDINATES: similar to AA sequence:RefSeq:WP_012068977.1
GO:0004068 - aspartate 1-decarboxylase activity [Evidence IEA]
GO:0006523 - alanine biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF012417.2
COORDINATES: similar to AA sequence:RefSeq:WP_019620337.1
COORDINATES: protein motif:HMM:NF013069.2
COORDINATES: protein motif:HMM:TIGR01730.1
GO:0005215 - transporter activity [Evidence IEA]
efflux RND transporter periplasmic adaptor subunit
COORDINATES: protein motif:HMM:NF012655.2
TetR/AcrR family transcriptional regulator
COORDINATES: similar to AA sequence:RefSeq:WP_019815768.1
COORDINATES: similar to AA sequence:RefSeq:WP_016916589.1
COORDINATES: similar to AA sequence:RefSeq:WP_020682312.1
GO:0046872 - metal ion binding [Evidence IEA]; GO:0016530 - metallochaperone activity [Evidence IEA]
GO:0019627 - urea metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_020682311.1
COORDINATES: protein motif:HMM:NF009751.0
GO:0016151 - nickel cation binding [Evidence IEA]
GO:0006457 - protein folding [Evidence IEA]; GO:0065003 - protein-containing complex assembly [Evidence IEA]; GO:0019627 - urea metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011589990.1
GO:0016151 - nickel cation binding [Evidence IEA]; GO:0009039 - urease activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_007019866.1
GO:0035550 - urease complex [Evidence IEA]
GO:0043419 - urea catabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_000422460.1
GO:0009039 - urease activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF013899.2
COORDINATES: protein motif:HMM:NF019976.2
COORDINATES: similar to AA sequence:RefSeq:WP_012071552.1
COORDINATES: similar to AA sequence:RefSeq:WP_020680428.1
COORDINATES: similar to AA sequence:RefSeq:WP_020680429.1
COORDINATES: similar to AA sequence:RefSeq:WP_020680430.1
COORDINATES: similar to AA sequence:RefSeq:WP_020681064.1
histidine kinase dimerization/phospho-acceptor domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_017502067.1
COORDINATES: protein motif:HMM:TIGR01511.1
GO:0005375 - copper ion transmembrane transporter activity [Evidence IEA]; GO:0043682 - P-type divalent copper transporter activity [Evidence IEA]
GO:0006825 - copper ion transport [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_009833734.1
COORDINATES: similar to AA sequence:RefSeq:WP_020682275.1
COORDINATES: similar to AA sequence:RefSeq:WP_013794939.1
GO:0008641 - ubiquitin-like modifier activating enzyme activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_019621643.1
COORDINATES: similar to AA sequence:RefSeq:WP_016913562.1
electron transfer flavoprotein subunit beta/FixA family protein
COORDINATES: similar to AA sequence:RefSeq:WP_014995040.1
COORDINATES: protein motif:HMM:NF024039.2
COORDINATES: similar to AA sequence:RefSeq:WP_019812027.1
COORDINATES: similar to AA sequence:RefSeq:WP_007021708.1
electron transfer flavoprotein-ubiquinone oxidoreductase
COORDINATES: protein motif:HMM:NF013067.2
GO:0005524 - ATP binding [Evidence IEA]; GO:0004340 - glucokinase activity [Evidence IEA]; GO:0005536 - glucose binding [Evidence IEA]
GO:0051156 - glucose 6-phosphate metabolic process [Evidence IEA]; GO:0006096 - glycolytic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_009095296.1
bifunctional enoyl-CoA hydratase/phosphate acetyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_020683415.1
GO:0004318 - enoyl-[acyl-carrier-protein] reductase (NADH) activity [Evidence IEA]
GO:0006633 - fatty acid biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_010628571.1
COORDINATES: similar to AA sequence:RefSeq:WP_013661921.1
COORDINATES: similar to AA sequence:RefSeq:WP_018916904.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0033221 - ATPase-coupled urea transmembrane transporter activity [Evidence IEA]
GO:0015840 - urea transport [Evidence IEA]
urea ABC transporter ATP-binding subunit UrtE
COORDINATES: similar to AA sequence:RefSeq:WP_011589784.1
urea ABC transporter ATP-binding protein UrtD
COORDINATES: similar to AA sequence:RefSeq:WP_019017512.1
GO:0033221 - ATPase-coupled urea transmembrane transporter activity [Evidence IEA]
urea ABC transporter permease subunit UrtC
COORDINATES: similar to AA sequence:RefSeq:WP_009723147.1
urea ABC transporter permease subunit UrtB
COORDINATES: similar to AA sequence:RefSeq:WP_019620275.1
GO:0055052 - ATP-binding cassette (ABC) transporter complex, substrate-binding subunit-containing [Evidence IEA]; GO:0030288 - outer membrane-bounded periplasmic space [Evidence IEA]
GO:0033221 - ATPase-coupled urea transmembrane transporter activity [Evidence IEA]; GO:0033219 - urea binding [Evidence IEA]
urea ABC transporter substrate-binding protein
COORDINATES: protein motif:HMM:NF022439.2
COORDINATES: protein motif:HMM:NF024116.2
COORDINATES: protein motif:HMM:NF023164.2
COORDINATES: similar to AA sequence:RefSeq:WP_013661932.1
COORDINATES: similar to AA sequence:RefSeq:WP_020405610.1
YeeE/YedE thiosulfate transporter family protein
COORDINATES: protein motif:HMM:NF012790.2
rhodanese-like domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_013662919.1
VPLPA-CTERM sorting domain-containing protein
COORDINATES: protein motif:HMM:NF012334.2
COORDINATES: protein motif:HMM:TIGR03571.1
COORDINATES: protein motif:HMM:NF012905.2
GO:0005524 - ATP binding [Evidence IEA]; GO:0016887 - ATP hydrolysis activity [Evidence IEA]; GO:0005215 - transporter activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_007017831.1
COORDINATES: protein motif:HMM:TIGR01222.1
GO:0004857 - enzyme inhibitor activity [Evidence IEA]
GO:0000918 - division septum site selection [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_009833335.1
COORDINATES: similar to AA sequence:RefSeq:WP_008928237.1
GO:0032955 - regulation of division septum assembly [Evidence IEA]
cell division topological specificity factor MinE
COORDINATES: protein motif:HMM:NF008746.0
GO:0000175 - 3'-5'-exoribonuclease activity [Evidence IEA]; GO:0008852 - exodeoxyribonuclease I activity [Evidence IEA]; GO:0003676 - nucleic acid binding [Evidence IEA]
COORDINATES: protein motif:HMM:NF021517.2
COORDINATES: protein motif:HMM:NF027513.2
COORDINATES: protein motif:HMM:NF040030.1
COORDINATES: similar to AA sequence:RefSeq:WP_011508336.1
COORDINATES: similar to AA sequence:RefSeq:WP_019952341.1
circularly permuted type 2 ATP-grasp protein
COORDINATES: protein motif:HMM:NF016086.2
COORDINATES: protein motif:HMM:NF025761.2
COORDINATES: similar to AA sequence:RefSeq:WP_010324768.1
COORDINATES: similar to AA sequence:RefSeq:WP_019016659.1
COORDINATES: similar to AA sequence:RefSeq:WP_007017111.1
GO:0047834 - D-threo-aldose 1-dehydrogenase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF019310.2
aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme
COORDINATES: similar to AA sequence:RefSeq:WP_007021306.1
GO:0045900 - negative regulation of translational elongation [Evidence IEA]
energy-dependent translational throttle protein EttA
COORDINATES: protein motif:HMM:TIGR00589.1
GO:0003908 - methylated-DNA-[protein]-cysteine S-methyltransferase activity [Evidence IEA]
methylated-DNA--[protein]-cysteine S-methyltransferase
COORDINATES: protein motif:HMM:TIGR00688.1
COORDINATES: protein motif:HMM:NF022737.2
COORDINATES: protein motif:HMM:NF007504.0
malate/lactate/ureidoglycolate dehydrogenase
COORDINATES: protein motif:HMM:NF013740.2
COORDINATES: protein motif:HMM:NF022434.2
COORDINATES: similar to AA sequence:RefSeq:WP_007111862.1
GO:0015297 - antiporter activity [Evidence IEA]
GO:0006814 - sodium ion transport [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_007148586.1
GO:0004370 - glycerol kinase activity [Evidence IEA]
GO:0006071 - glycerol metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_018918501.1
tripartite tricarboxylate transporter permease
COORDINATES: protein motif:HMM:NF014073.2
COORDINATES: similar to AA sequence:RefSeq:WP_009832684.1
COORDINATES: protein motif:HMM:NF013933.2
GO:0006865 - amino acid transport [Evidence IEA]
COORDINATES: protein motif:HMM:NF025052.2
COORDINATES: protein motif:HMM:NF024922.2
alpha-ketoglutarate-dependent dioxygenase AlkB
COORDINATES: protein motif:HMM:NF016296.2
LytTR family DNA-binding domain-containing protein
GO:0006749 - glutathione metabolic process [Evidence IEA]
glutathione S-transferase N-terminal domain-containing protein
COORDINATES: protein motif:HMM:NF024675.2
COORDINATES: protein motif:HMM:NF013431.2
COORDINATES: similar to AA sequence:RefSeq:WP_007020224.1
COORDINATES: similar to AA sequence:RefSeq:WP_009831897.1
GO:1904047 - S-adenosyl-L-methionine binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014995607.1
GO:0009263 - deoxyribonucleotide biosynthetic process [Evidence IEA]
ribonucleotide-diphosphate reductase subunit beta
COORDINATES: similar to AA sequence:RefSeq:WP_008737921.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0004748 - ribonucleoside-diphosphate reductase activity, thioredoxin disulfide as acceptor [Evidence IEA]
ribonucleoside-diphosphate reductase subunit alpha
COORDINATES: similar to AA sequence:RefSeq:WP_009395290.1
COORDINATES: similar to AA sequence:RefSeq:WP_008929153.1
GO:0004812 - aminoacyl-tRNA ligase activity [Evidence IEA]; GO:0005524 - ATP binding [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]; GO:0004832 - valine-tRNA ligase activity [Evidence IEA]
GO:0006438 - valyl-tRNA aminoacylation [Evidence IEA]
COORDINATES: protein motif:HMM:NF016267.2
COORDINATES: similar to AA sequence:RefSeq:WP_010322548.1
GO:0070006 - metalloaminopeptidase activity [Evidence IEA]
GO:0019538 - protein metabolic process [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR04407.1
GO:0015221 - lipopolysaccharide transmembrane transporter activity [Evidence IEA]
GO:0015920 - lipopolysaccharide transport [Evidence IEA]
LPS export ABC transporter permease LptF
COORDINATES: protein motif:HMM:TIGR04408.1
LPS export ABC transporter permease LptG
COORDINATES: protein motif:HMM:NF018028.2
COORDINATES: similar to AA sequence:RefSeq:WP_016855149.1
GO:0016853 - isomerase activity [Evidence IEA]; GO:0016740 - transferase activity [Evidence IEA]
tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA
COORDINATES: similar to AA sequence:RefSeq:WP_008047714.1
GO:0008479 - queuine tRNA-ribosyltransferase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_010322688.1
COORDINATES: similar to AA sequence:RefSeq:WP_020409490.1
GO:0031522 - cell envelope Sec protein transport complex [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_010322686.1
COORDINATES: protein motif:HMM:NF024996.2
COORDINATES: protein motif:HMM:TIGR01764.1
COORDINATES: similar to AA sequence:RefSeq:WP_008043044.1
COORDINATES: similar to AA sequence:RefSeq:WP_018918126.1
GO:0009001 - serine O-acetyltransferase activity [Evidence IEA]
GO:0006535 - cysteine biosynthetic process from serine [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_007148800.1
helix-turn-helix transcriptional regulator
COORDINATES: similar to AA sequence:RefSeq:WP_019952049.1
aminotransferase class V-fold PLP-dependent enzyme
COORDINATES: similar to AA sequence:RefSeq:WP_020583153.1
iron-sulfur cluster assembly accessory protein
COORDINATES: similar to AA sequence:RefSeq:WP_012316140.1
GO:0004550 - nucleoside diphosphate kinase activity [Evidence IEA]
GO:0006165 - nucleoside diphosphate phosphorylation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012069067.1
GO:0016433 - rRNA (adenine) methyltransferase activity [Evidence IEA]; GO:0008757 - S-adenosylmethionine-dependent methyltransferase activity [Evidence IEA]
23S rRNA (adenine(2503)-C(2))-methyltransferase RlmN
COORDINATES: protein motif:HMM:TIGR02521.1
type IV pilus biogenesis/stability protein PilW
COORDINATES: protein motif:HMM:NF024805.2
COORDINATES: similar to AA sequence:RefSeq:WP_011398227.1
GO:0046429 - 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase activity [Evidence IEA]
GO:0044237 - cellular metabolic process [Evidence IEA]
flavodoxin-dependent (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase
COORDINATES: similar to AA sequence:RefSeq:WP_019020025.1
GO:0004821 - histidine-tRNA ligase activity [Evidence IEA]
GO:0006427 - histidyl-tRNA aminoacylation [Evidence IEA]
COORDINATES: protein motif:HMM:NF021492.2
COORDINATES: protein motif:HMM:NF024753.2
PQQ-binding-like beta-propeller repeat protein
COORDINATES: similar to AA sequence:RefSeq:WP_019622716.1
COORDINATES: protein motif:HMM:NF013844.2
COORDINATES: similar to AA sequence:RefSeq:WP_011396298.1
GO:0008276 - protein methyltransferase activity [Evidence IEA]; GO:0008757 - S-adenosylmethionine-dependent methyltransferase activity [Evidence IEA]
GO:0018364 - peptidyl-glutamine methylation [Evidence IEA]; GO:0042273 - ribosomal large subunit biogenesis [Evidence IEA]
50S ribosomal protein L3 N(5)-glutamine methyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_011396299.1
GO:0004107 - chorismate synthase activity [Evidence IEA]
GO:0009073 - aromatic amino acid family biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF024241.2
COORDINATES: similar to AA sequence:RefSeq:WP_020680388.1
GO:0009316 - 3-isopropylmalate dehydratase complex [Evidence IEA]
GO:0003861 - 3-isopropylmalate dehydratase activity [Evidence IEA]
GO:0009098 - leucine biosynthetic process [Evidence IEA]
3-isopropylmalate dehydratase large subunit
COORDINATES: similar to AA sequence:RefSeq:WP_019622282.1
3-isopropylmalate dehydratase small subunit
COORDINATES: similar to AA sequence:RefSeq:WP_008956191.1
GO:0003862 - 3-isopropylmalate dehydrogenase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004641000.1
GO:0004073 - aspartate-semialdehyde dehydrogenase activity [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR03505.1
COORDINATES: similar to AA sequence:RefSeq:WP_008735933.1
GO:0009982 - pseudouridine synthase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_015486693.1
GO:0004640 - phosphoribosylanthranilate isomerase activity [Evidence IEA]
GO:0000162 - tryptophan biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013331994.1
GO:0004834 - tryptophan synthase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_008735939.1
COORDINATES: similar to AA sequence:RefSeq:WP_019951531.1
GO:0009317 - acetyl-CoA carboxylase complex [Evidence IEA]
GO:0003989 - acetyl-CoA carboxylase activity [Evidence IEA]
acetyl-CoA carboxylase, carboxyltransferase subunit beta
COORDINATES: protein motif:HMM:TIGR01499.1
COORDINATES: protein motif:HMM:NF014704.2
GO:0009403 - toxin biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_007022853.1
GO:0004044 - amidophosphoribosyltransferase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_007016962.1
GO:0003824 - catalytic activity [Evidence IEA]; GO:0030170 - pyridoxal phosphate binding [Evidence IEA]
GO:0071268 - homocysteine biosynthetic process [Evidence IEA]; GO:0019346 - transsulfuration [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011396188.1
COORDINATES: similar to AA sequence:RefSeq:WP_008042754.1
GO:0033743 - peptide-methionine (R)-S-oxide reductase activity [Evidence IEA]
GO:0030091 - protein repair [Evidence IEA]; GO:0006979 - response to oxidative stress [Evidence IEA]
peptide-methionine (R)-S-oxide reductase MsrB
COORDINATES: protein motif:HMM:NF016056.2
COORDINATES: similar to AA sequence:RefSeq:WP_020407036.1
GO:0003934 - GTP cyclohydrolase I activity [Evidence IEA]
GO:0042559 - pteridine-containing compound biosynthetic process [Evidence IEA]; GO:0046654 - tetrahydrofolate biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR01983.1
GO:0008689 - 3-demethylubiquinone-9 3-O-methyltransferase activity [Evidence IEA]
bifunctional 2-polyprenyl-6-hydroxyphenol methylase/3-demethylubiquinol 3-O-methyltransferase UbiG
COORDINATES: protein motif:HMM:NF013456.2
2-amino-4-hydroxy-6- hydroxymethyldihydropteridine diphosphokinase
COORDINATES: similar to AA sequence:RefSeq:WP_007020386.1
COORDINATES: similar to AA sequence:RefSeq:WP_017429717.1
COORDINATES: protein motif:HMM:NF021526.2
COORDINATES: protein motif:HMM:TIGR02765.1
GO:0003913 - DNA photolyase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF015406.2
COORDINATES: protein motif:HMM:NF023338.2
COORDINATES: similar to AA sequence:RefSeq:WP_010628328.1
GO:0003684 - damaged DNA binding [Evidence IEA]; GO:0003887 - DNA-directed DNA polymerase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF013180.2
COORDINATES: protein motif:HMM:NF013700.2
COORDINATES: protein motif:HMM:TIGR00237.1
COORDINATES: similar to AA sequence:RefSeq:WP_007020928.1
GO:0003938 - IMP dehydrogenase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_008043076.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0003922 - GMP synthase (glutamine-hydrolyzing) activity [Evidence IEA]; GO:0016462 - pyrophosphatase activity [Evidence IEA]
GO:0006177 - GMP biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF024880.2
COORDINATES: similar to AA sequence:RefSeq:WP_019811004.1
COORDINATES: protein motif:HMM:NF018630.2
COORDINATES: similar to AA sequence:RefSeq:WP_015487758.1
GO:0008251 - tRNA-specific adenosine deaminase activity [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA]
GO:0002100 - tRNA wobble adenosine to inosine editing [Evidence IEA]
COORDINATES: protein motif:HMM:NF008112.0
GO:0008933 - lytic transglycosylase activity [Evidence IEA]
GO:0000270 - peptidoglycan metabolic process [Evidence IEA]
membrane-bound lytic murein transglycosylase MltF
COORDINATES: protein motif:HMM:NF003672.0
GO:0004642 - phosphoribosylformylglycinamidine synthase activity [Evidence IEA]
phosphoribosylformylglycinamidine synthase
COORDINATES: protein motif:HMM:NF018473.2
COORDINATES: protein motif:HMM:NF016340.2
GO:0008990 - rRNA (guanine-N2-)-methyltransferase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF013702.2
COORDINATES: protein motif:HMM:TIGR01353.1
GO:0008832 - dGTPase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_016856483.1
COORDINATES: similar to AA sequence:RefSeq:WP_020408125.1
COORDINATES: similar to AA sequence:RefSeq:WP_011394419.1
GO:0006094 - gluconeogenesis [Evidence IEA]; GO:0019682 - glyceraldehyde-3-phosphate metabolic process [Evidence IEA]; GO:0006096 - glycolytic process [Evidence IEA]
type I glyceraldehyde-3-phosphate dehydrogenase
COORDINATES: similar to AA sequence:RefSeq:WP_018917418.1
GO:0004456 - phosphogluconate dehydratase activity [Evidence IEA]
GO:0009255 - Entner-Doudoroff pathway through 6-phosphogluconate [Evidence IEA]
COORDINATES: protein motif:HMM:NF014715.2
GO:0004340 - glucokinase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_009834590.1
GO:0008422 - beta-glucosidase activity [Evidence IEA]
GO:0030245 - cellulose catabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012072003.1
COORDINATES: similar to AA sequence:RefSeq:WP_008045187.1
COORDINATES: similar to AA sequence:RefSeq:WP_013797911.1
COORDINATES: similar to AA sequence:RefSeq:WP_016855696.1
GO:0140359 - ABC-type transporter activity [Evidence IEA]; GO:0005524 - ATP binding [Evidence IEA]
sn-glycerol-3-phosphate ABC transporter ATP-binding protein UgpC
COORDINATES: similar to AA sequence:RefSeq:WP_009835742.1
GO:0008675 - 2-dehydro-3-deoxy-phosphogluconate aldolase activity [Evidence IEA]; GO:0008700 - 4-hydroxy-2-oxoglutarate aldolase activity [Evidence IEA]
GO:0009255 - Entner-Doudoroff pathway through 6-phosphogluconate [Evidence IEA]; GO:0009084 - glutamine family amino acid biosynthetic process [Evidence IEA]
bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase
COORDINATES: similar to AA sequence:RefSeq:WP_011394335.1
COORDINATES: protein motif:HMM:NF014667.2
COORDINATES: similar to AA sequence:RefSeq:WP_016916170.1
GO:0003987 - acetate-CoA ligase activity [Evidence IEA]
GO:0019427 - acetyl-CoA biosynthetic process from acetate [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_018916303.1
COORDINATES: similar to AA sequence:RefSeq:WP_008736819.1
GO:0016896 - exoribonuclease activity, producing 5'-phosphomonoesters [Evidence IEA]
GO:0006364 - rRNA processing [Evidence IEA]; GO:0042780 - tRNA 3'-end processing [Evidence IEA]
COORDINATES: protein motif:HMM:NF037805.2
COORDINATES: similar to AA sequence:RefSeq:WP_016855579.1
GO:0004055 - argininosuccinate synthase activity [Evidence IEA]; GO:0005524 - ATP binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_007020740.1
GO:0003906 - DNA-(apurinic or apyrimidinic site) endonuclease activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_008043115.1
COORDINATES: similar to AA sequence:RefSeq:WP_019018270.1
GO:0009055 - electron transfer activity [Evidence IEA]; GO:0010181 - FMN binding [Evidence IEA]
GO:0022900 - electron transport chain [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_019018271.1
RnfABCDGE type electron transport complex subunit D
COORDINATES: protein motif:HMM:NF003454.1
GO:0051539 - 4 iron, 4 sulfur cluster binding [Evidence IEA]; GO:0009055 - electron transfer activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_007016928.1
COORDINATES: similar to AA sequence:RefSeq:WP_007016927.1
COORDINATES: protein motif:HMM:NF004790.0
GO:0004851 - uroporphyrin-III C-methyltransferase activity [Evidence IEA]
GO:0019354 - siroheme biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_007022238.1
bifunctional alpha/beta hydrolase/OsmC family protein
COORDINATES: similar to AA sequence:RefSeq:WP_011507417.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0004825 - methionine-tRNA ligase activity [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_020683631.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0016887 - ATP hydrolysis activity [Evidence IEA]; GO:0051536 - iron-sulfur cluster binding [Evidence IEA]
GO:0016226 - iron-sulfur cluster assembly [Evidence IEA]
iron-sulfur cluster carrier protein ApbC
COORDINATES: similar to AA sequence:RefSeq:WP_005889365.1
GO:0008829 - dCTP deaminase activity [Evidence IEA]
GO:0009394 - 2'-deoxyribonucleotide metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_010322667.1
COORDINATES: similar to AA sequence:RefSeq:WP_020683046.1
bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase FolD
COORDINATES: protein motif:HMM:NF013219.2
COORDINATES: protein motif:HMM:NF012801.2
COORDINATES: nucleotide motif:Rfam:14.4:RF00174
cobalamin riboswitch; Derived by automated computational analysis using gene prediction method: cmsearch.
COORDINATES: protein motif:HMM:NF038402.1
COORDINATES: protein motif:HMM:NF018894.2
COORDINATES: similar to AA sequence:RefSeq:WP_013796356.1
GO:0042953 - lipoprotein transport [Evidence IEA]
lipoprotein-releasing ABC transporter permease subunit
COORDINATES: similar to AA sequence:RefSeq:WP_009099267.1
COORDINATES: protein motif:HMM:NF021363.2
COORDINATES: protein motif:HMM:NF015714.2
COORDINATES: protein motif:HMM:NF013760.2
MotA/TolQ/ExbB proton channel family protein
COORDINATES: protein motif:HMM:NF014525.2
COORDINATES: protein motif:HMM:NF012869.2
GO:0005524 - ATP binding [Evidence IEA]; GO:0042626 - ATPase-coupled transmembrane transporter activity [Evidence IEA]
ABC transporter transmembrane domain-containing protein
COORDINATES: protein motif:HMM:NF014645.2
GO:0009029 - tetraacyldisaccharide 4'-kinase activity [Evidence IEA]
GO:0009245 - lipid A biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011396560.1
COORDINATES: similar to AA sequence:RefSeq:WP_013331739.1
GO:0008690 - 3-deoxy-manno-octulosonate cytidylyltransferase activity [Evidence IEA]
3-deoxy-manno-octulosonate cytidylyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_018915796.1
low molecular weight protein-tyrosine-phosphatase
COORDINATES: protein motif:HMM:TIGR00179.1
GO:0071949 - FAD binding [Evidence IEA]; GO:0008762 - UDP-N-acetylmuramate dehydrogenase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_010323951.1
GO:0004540 - ribonuclease activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_020681554.1
GO:0001522 - pseudouridine synthesis [Evidence IEA]; GO:0009451 - RNA modification [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_007150095.1
COORDINATES: protein motif:HMM:NF014591.2
COORDINATES: protein motif:HMM:NF014657.2
COORDINATES: similar to AA sequence:RefSeq:WP_005151049.1
COORDINATES: similar to AA sequence:RefSeq:WP_010324067.1
GO:0004314 - [acyl-carrier-protein] S-malonyltransferase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013661162.1
GO:0004316 - 3-oxoacyl-[acyl-carrier-protein] reductase (NADPH) activity [Evidence IEA]; GO:0051287 - NAD binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_020582918.1
COORDINATES: similar to AA sequence:RefSeq:WP_008956800.1
GO:0004315 - 3-oxoacyl-[acyl-carrier-protein] synthase activity [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00247.1
GO:0008932 - lytic endotransglycosylase activity [Evidence IEA]
GO:0071555 - cell wall organization [Evidence IEA]; GO:0009252 - peptidoglycan biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_020408409.1
GO:0004798 - thymidylate kinase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF024575.2
COORDINATES: similar to AA sequence:RefSeq:WP_020582925.1
GO:0035438 - cyclic-di-GMP binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_019621829.1
COORDINATES: similar to AA sequence:RefSeq:WP_013663176.1
GO:0009982 - pseudouridine synthase activity [Evidence IEA]; GO:0003723 - RNA binding [Evidence IEA]
GO:0001522 - pseudouridine synthesis [Evidence IEA]
23S rRNA pseudouridine(2604) synthase RluF
COORDINATES: similar to AA sequence:RefSeq:WP_004097481.1
COORDINATES: protein motif:HMM:NF017519.2
YiiX/YebB-like N1pC/P60 family cysteine hydrolase
COORDINATES: protein motif:HMM:NF015983.2
GO:0003824 - catalytic activity [Evidence IEA]; GO:0051536 - iron-sulfur cluster binding [Evidence IEA]
COORDINATES: protein motif:HMM:NF021049.2
YiiD C-terminal domain-containing protein
COORDINATES: protein motif:HMM:TIGR03081.1
COORDINATES: similar to AA sequence:RefSeq:WP_020406772.1
COORDINATES: protein motif:HMM:NF006958.0
GO:0005525 - GTP binding [Evidence IEA]; GO:0003924 - GTPase activity [Evidence IEA]
methylmalonyl Co-A mutase-associated GTPase MeaB
COORDINATES: protein motif:HMM:NF006944.0
GO:0046872 - metal ion binding [Evidence IEA]; GO:0004494 - methylmalonyl-CoA mutase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF014805.2
biotin carboxylase N-terminal domain-containing protein
COORDINATES: protein motif:HMM:NF013225.2
carboxyl transferase domain-containing protein
COORDINATES: protein motif:HMM:NF021382.2
COORDINATES: similar to AA sequence:RefSeq:WP_007022746.1
GO:0003677 - DNA binding [Evidence IEA]; GO:0004519 - endonuclease activity [Evidence IEA]; GO:0008853 - exodeoxyribonuclease III activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF012521.2
COORDINATES: protein motif:HMM:NF017819.2
COORDINATES: similar to AA sequence:RefSeq:WP_014995383.1
GO:0070069 - cytochrome complex [Evidence IEA]
GO:0019646 - aerobic electron transport chain [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_008928324.1
GO:0016682 - oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor [Evidence IEA]
cytochrome d ubiquinol oxidase subunit II
COORDINATES: similar to AA sequence:RefSeq:WP_000270285.1
COORDINATES: similar to AA sequence:RefSeq:WP_014999296.1
COORDINATES: similar to AA sequence:RefSeq:WP_010626610.1
GO:0016791 - phosphatase activity [Evidence IEA]; GO:0008772 - [isocitrate dehydrogenase (NADP+)] kinase activity [Evidence IEA]
GO:0006006 - glucose metabolic process [Evidence IEA]
bifunctional isocitrate dehydrogenase kinase/phosphatase
COORDINATES: similar to AA sequence:RefSeq:WP_014996669.1
COORDINATES: protein motif:HMM:NF014007.2
GO:0000041 - transition metal ion transport [Evidence IEA]
energy-coupling factor ABC transporter permease
COORDINATES: similar to AA sequence:RefSeq:WP_019952733.1
COORDINATES: protein motif:HMM:NF019619.2
COORDINATES: similar to AA sequence:RefSeq:WP_011507739.1
GO:0004018 - N6-(1,2-dicarboxyethyl)AMP AMP-lyase (fumarate-forming) activity [Evidence IEA]
GO:0006188 - IMP biosynthetic process [Evidence IEA]; GO:0009152 - purine ribonucleotide biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF001246.0
high frequency lysogenization protein HflD
COORDINATES: similar to AA sequence:RefSeq:WP_015486947.1
GO:0016783 - sulfurtransferase activity [Evidence IEA]; GO:0016740 - transferase activity [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00093.1
COORDINATES: similar to AA sequence:RefSeq:WP_011588565.1
GO:0004450 - isocitrate dehydrogenase (NADP+) activity [Evidence IEA]; GO:0000287 - magnesium ion binding [Evidence IEA]; GO:0051287 - NAD binding [Evidence IEA]
GO:0006099 - tricarboxylic acid cycle [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_007019823.1
COORDINATES: similar to AA sequence:RefSeq:WP_008737656.1
GO:0009368 - endopeptidase Clp complex [Evidence IEA]
GO:0004176 - ATP-dependent peptidase activity [Evidence IEA]
GO:0043335 - protein unfolding [Evidence IEA]; GO:0006508 - proteolysis [Evidence IEA]
ATP-dependent Clp protease ATP-binding subunit ClpA
COORDINATES: protein motif:HMM:NF023330.2
COORDINATES: similar to AA sequence:RefSeq:WP_008938619.1
COORDINATES: similar to AA sequence:RefSeq:WP_010323197.1
GO:0004057 - arginyltransferase activity [Evidence IEA]
GO:0016598 - protein arginylation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_019623294.1
GO:0008914 - leucyltransferase activity [Evidence IEA]
leucyl/phenylalanyl-tRNA--protein transferase
COORDINATES: similar to AA sequence:RefSeq:WP_011396236.1
GO:0004791 - thioredoxin-disulfide reductase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF024882.2
DNA translocase FtsK 4TM domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_011396321.1
incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: protein motif:HMM:TIGR00547.1
GO:0008320 - protein transmembrane transporter activity [Evidence IEA]
outer membrane lipoprotein chaperone LolA
COORDINATES: similar to AA sequence:RefSeq:WP_008737669.1
replication-associated recombination protein A
COORDINATES: protein motif:HMM:TIGR00494.1
GO:1903425 - fluoride transmembrane transporter activity [Evidence IEA]
GO:1903424 - fluoride transmembrane transport [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_007017790.1
GO:0004828 - serine-tRNA ligase activity [Evidence IEA]
GO:0006434 - seryl-tRNA aminoacylation [Evidence IEA]
COORDINATES: protein motif:HMM:NF019736.2
COORDINATES: similar to AA sequence:RefSeq:WP_013330920.1
COORDINATES: similar to AA sequence:RefSeq:WP_010629335.1
COORDINATES: similar to AA sequence:RefSeq:WP_016856512.1
COORDINATES: similar to AA sequence:RefSeq:WP_019019920.1
sugar ABC transporter substrate-binding protein
COORDINATES: protein motif:HMM:NF012742.2
LacI family DNA-binding transcriptional regulator
COORDINATES: similar to AA sequence:RefSeq:WP_009722488.1
COORDINATES: similar to AA sequence:RefSeq:WP_011395239.1
COORDINATES: protein motif:HMM:TIGR01312.1
GO:0005515 - protein binding [Evidence IEA]; GO:0004856 - xylulokinase activity [Evidence IEA]
GO:0042732 - D-xylose metabolic process [Evidence IEA]; GO:0005997 - xylulose metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_008736993.1
GO:0008929 - methylglyoxal synthase activity [Evidence IEA]
GO:0019242 - methylglyoxal biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF012692.2
COORDINATES: protein motif:HMM:NF024799.2
COORDINATES: protein motif:HMM:NF014684.2
COORDINATES: protein motif:HMM:NF013116.2
COORDINATES: protein motif:HMM:NF001211.0
GO:0004347 - glucose-6-phosphate isomerase activity [Evidence IEA]
GO:0006094 - gluconeogenesis [Evidence IEA]; GO:0006096 - glycolytic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013795509.1
TusE/DsrC/DsvC family sulfur relay protein
COORDINATES: protein motif:HMM:NF014672.2
COORDINATES: similar to AA sequence:RefSeq:WP_020583619.1
COORDINATES: similar to AA sequence:RefSeq:WP_004220743.1
GO:0003978 - UDP-glucose 4-epimerase activity [Evidence IEA]
GO:0006012 - galactose metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_007016227.1
tRNA threonylcarbamoyladenosine dehydratase
COORDINATES: protein motif:HMM:NF024772.2
COORDINATES: similar to AA sequence:RefSeq:WP_019018871.1
COORDINATES: protein motif:HMM:NF012774.2
COORDINATES: similar to AA sequence:RefSeq:WP_010321620.1
COORDINATES: protein motif:HMM:NF013353.2
GO:0036361 - racemase activity, acting on amino acids and derivatives [Evidence IEA]
aspartate/glutamate racemase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_018917424.1
2-dehydro-3-deoxy-6-phosphogalactonate aldolase
COORDINATES: protein motif:HMM:NF016894.2
FadR/GntR family transcriptional regulator
COORDINATES: similar to AA sequence:RefSeq:WP_014992751.1
COORDINATES: similar to AA sequence:RefSeq:WP_020286528.1
GO:0051287 - NAD binding [Evidence IEA]; GO:0050661 - NADP binding [Evidence IEA]; GO:0016620 - oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor [Evidence IEA]
glyceraldehyde-3-phosphate dehydrogenase
COORDINATES: similar to AA sequence:RefSeq:WP_012069420.1
GO:0016655 - oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor [Evidence IEA]
Na(+)-translocating NADH-quinone reductase subunit A
COORDINATES: similar to AA sequence:RefSeq:WP_007019532.1
GO:0010181 - FMN binding [Evidence IEA]; GO:0016655 - oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor [Evidence IEA]
GO:0022904 - respiratory electron transport chain [Evidence IEA]; GO:0055085 - transmembrane transport [Evidence IEA]
NADH:ubiquinone reductase (Na(+)-transporting) subunit B
COORDINATES: similar to AA sequence:RefSeq:WP_011588318.1
Na(+)-translocating NADH-quinone reductase subunit C
COORDINATES: similar to AA sequence:RefSeq:WP_019621691.1
NADH:ubiquinone reductase (Na(+)-transporting) subunit D
COORDINATES: similar to AA sequence:RefSeq:WP_009833701.1
NADH:ubiquinone reductase (Na(+)-transporting) subunit E
COORDINATES: similar to AA sequence:RefSeq:WP_013796607.1
NADH:ubiquinone reductase (Na(+)-transporting) subunit F
COORDINATES: protein motif:HMM:NF014477.2
COORDINATES: similar to AA sequence:RefSeq:WP_009833704.1
COORDINATES: similar to AA sequence:RefSeq:WP_009723506.1
GO:0050660 - flavin adenine dinucleotide binding [Evidence IEA]; GO:0003957 - NAD(P)+ transhydrogenase (B-specific) activity [Evidence IEA]
GO:0045454 - cell redox homeostasis [Evidence IEA]
COORDINATES: protein motif:HMM:NF013584.2
COORDINATES: similar to AA sequence:RefSeq:WP_017431146.1
COORDINATES: similar to AA sequence:RefSeq:WP_020286169.1
COORDINATES: protein motif:HMM:NF016028.2
COORDINATES: protein motif:HMM:NF012534.2
COORDINATES: similar to AA sequence:RefSeq:WP_011398998.1
GO:0009014 - succinyl-diaminopimelate desuccinylase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_016915054.1
COORDINATES: similar to AA sequence:RefSeq:WP_008928263.1
GO:0009016 - succinyldiaminopimelate transaminase activity [Evidence IEA]
GO:0019877 - diaminopimelate biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR01693.1
GO:0008773 - [protein-PII] uridylyltransferase activity [Evidence IEA]
GO:0018177 - protein uridylylation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_007022058.1
COORDINATES: similar to AA sequence:RefSeq:WP_020406470.1
COORDINATES: similar to AA sequence:RefSeq:WP_011398990.1
COORDINATES: similar to AA sequence:RefSeq:WP_007151277.1
GO:0033862 - UMP kinase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_018918257.1
GO:0008135 - translation factor activity, RNA binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011505875.1
COORDINATES: protein motif:HMM:NF013327.2
COORDINATES: similar to AA sequence:RefSeq:WP_020584352.1
GO:0030604 - 1-deoxy-D-xylulose-5-phosphate reductoisomerase activity [Evidence IEA]
GO:0019288 - isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway [Evidence IEA]
1-deoxy-D-xylulose-5-phosphate reductoisomerase
COORDINATES: protein motif:HMM:TIGR00054.1
COORDINATES: protein motif:HMM:TIGR03303.1
outer membrane protein assembly factor BamA
COORDINATES: protein motif:HMM:NF015871.2
COORDINATES: similar to AA sequence:RefSeq:WP_019950640.1
GO:0016410 - N-acyltransferase activity [Evidence IEA]
UDP-3-O-(3-hydroxymyristoyl)glucosamine N-acyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_010323533.1
GO:0016836 - hydro-lyase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_008736775.1
GO:0008780 - acyl-[acyl-carrier-protein]-UDP-N-acetylglucosamine O-acyltransferase activity [Evidence IEA]
GO:0008610 - lipid biosynthetic process [Evidence IEA]
acyl-ACP--UDP-N-acetylglucosamine O-acyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_008736778.1
GO:0008915 - lipid-A-disaccharide synthase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011505885.1
GO:0003723 - RNA binding [Evidence IEA]; GO:0004523 - RNA-DNA hybrid ribonuclease activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_009724155.1
GO:0008408 - 3'-5' exonuclease activity [Evidence IEA]; GO:0003676 - nucleic acid binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_010630143.1
acetyl-CoA carboxylase carboxyltransferase subunit alpha
COORDINATES: protein motif:HMM:TIGR02432.1
GO:0016879 - ligase activity, forming carbon-nitrogen bonds [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011505925.1
GO:0003883 - CTP synthase activity [Evidence IEA]
GO:0006241 - CTP biosynthetic process [Evidence IEA]; GO:0006221 - pyrimidine nucleotide biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_008043576.1
GO:0008676 - 3-deoxy-8-phosphooctulonate synthase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_018918047.1
GO:0004634 - phosphopyruvate hydratase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF016839.2
septum formation initiator family protein
COORDINATES: protein motif:HMM:NF013308.2
GO:0070567 - cytidylyltransferase activity [Evidence IEA]
2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_007113668.1
GO:0008685 - 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase activity [Evidence IEA]
2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase
COORDINATES: protein motif:HMM:NF013322.2
COORDINATES: similar to AA sequence:RefSeq:WP_011507928.1
GO:0008252 - nucleotidase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF001453.0
GO:0004719 - protein-L-isoaspartate (D-aspartate) O-methyltransferase activity [Evidence IEA]
protein-L-isoaspartate(D-aspartate) O-methyltransferase
COORDINATES: protein motif:HMM:NF015951.2
peptidoglycan DD-metalloendopeptidase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_020584388.1
GO:0003677 - DNA binding [Evidence IEA]; GO:0003700 - DNA-binding transcription factor activity [Evidence IEA]; GO:0016987 - sigma factor activity [Evidence IEA]
GO:0006352 - DNA-templated transcription initiation [Evidence IEA]; GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013797394.1
COORDINATES: similar to AA sequence:RefSeq:WP_015049151.1
COORDINATES: similar to AA sequence:RefSeq:WP_020681886.1
COORDINATES: protein motif:HMM:NF014517.2
COORDINATES: protein motif:HMM:NF013594.2
COORDINATES: similar to AA sequence:RefSeq:WP_011507141.1
COORDINATES: similar to AA sequence:RefSeq:WP_019017649.1
GO:0004812 - aminoacyl-tRNA ligase activity [Evidence IEA]; GO:0005524 - ATP binding [Evidence IEA]; GO:0016874 - ligase activity [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]
GO:0006418 - tRNA aminoacylation for protein translation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011398680.1
YebC/PmpR family DNA-binding transcriptional regulator
COORDINATES: similar to AA sequence:RefSeq:WP_011398678.1
GO:0008821 - crossover junction endodeoxyribonuclease activity [Evidence IEA]
GO:0006310 - DNA recombination [Evidence IEA]
crossover junction endodeoxyribonuclease RuvC
COORDINATES: protein motif:HMM:TIGR00084.1
GO:0009379 - Holliday junction helicase complex [Evidence IEA]
GO:0009378 - four-way junction helicase activity [Evidence IEA]
Holliday junction branch migration protein RuvA
COORDINATES: similar to AA sequence:RefSeq:WP_008042697.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0003677 - DNA binding [Evidence IEA]; GO:0009378 - four-way junction helicase activity [Evidence IEA]
Holliday junction branch migration DNA helicase RuvB
COORDINATES: protein motif:HMM:TIGR00051.1
GO:0047617 - acyl-CoA hydrolase activity [Evidence IEA]; GO:0005515 - protein binding [Evidence IEA]
tol-pal system-associated acyl-CoA thioesterase
COORDINATES: similar to AA sequence:RefSeq:WP_007016349.1
GO:1902600 - proton transmembrane transport [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_010628617.1
GO:0098567 - periplasmic side of plasma membrane [Evidence IEA]
GO:0061024 - membrane organization [Evidence IEA]; GO:1902600 - proton transmembrane transport [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR02794.1
COORDINATES: protein motif:HMM:TIGR02800.1
GO:0030288 - outer membrane-bounded periplasmic space [Evidence IEA]
Tol-Pal system beta propeller repeat protein TolB
COORDINATES: similar to AA sequence:RefSeq:WP_019622171.1
peptidoglycan-associated lipoprotein Pal
COORDINATES: protein motif:HMM:NF025910.2
GO:0070206 - protein trimerization [Evidence IEA]
YbgF trimerization domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_020584750.1
GO:0051539 - 4 iron, 4 sulfur cluster binding [Evidence IEA]; GO:1904047 - S-adenosyl-L-methionine binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_020286261.1
COORDINATES: similar to AA sequence:RefSeq:WP_012068587.1
COORDINATES: similar to AA sequence:RefSeq:WP_012069898.1
GO:0051539 - 4 iron, 4 sulfur cluster binding [Evidence IEA]; GO:0008987 - quinolinate synthetase A activity [Evidence IEA]
GO:0009435 - NAD biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_007019432.1
COORDINATES: protein motif:HMM:NF020123.2
COORDINATES: similar to AA sequence:RefSeq:WP_007020137.1
GO:0008840 - 4-hydroxy-tetrahydrodipicolinate synthase activity [Evidence IEA]
4-hydroxy-tetrahydrodipicolinate synthase
outer membrane protein assembly factor BamC
COORDINATES: protein motif:HMM:NF012955.2
COORDINATES: similar to AA sequence:RefSeq:WP_017429646.1
GO:0004639 - phosphoribosylaminoimidazolesuccinocarboxamide synthase activity [Evidence IEA]
phosphoribosylaminoimidazolesuccinocarboxamide synthase
signal recognition particle sRNA small type
COORDINATES: nucleotide motif:Rfam:14.4:RF00169
COORDINATES: similar to AA sequence:RefSeq:WP_008735609.1
COORDINATES: similar to AA sequence:RefSeq:WP_008735611.1
YbaB/EbfC family nucleoid-associated protein
COORDINATES: similar to AA sequence:RefSeq:WP_020583374.1
COORDINATES: protein motif:HMM:NF013755.2
GO:0003676 - nucleic acid binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_018916801.1
COORDINATES: protein motif:HMM:NF012257.2
Crp/Fnr family transcriptional regulator
COORDINATES: similar to AA sequence:RefSeq:WP_011507173.1
GO:0050660 - flavin adenine dinucleotide binding [Evidence IEA]; GO:0004362 - glutathione-disulfide reductase (NADPH) activity [Evidence IEA]; GO:0050661 - NADP binding [Evidence IEA]
GO:0045454 - cell redox homeostasis [Evidence IEA]; GO:0006749 - glutathione metabolic process [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR03169.1
COORDINATES: similar to AA sequence:RefSeq:WP_007019766.1
COORDINATES: protein motif:HMM:NF008752.0
GO:0043828 - tRNA 2-selenouridine synthase activity [Evidence IEA]
GO:0002098 - tRNA wobble uridine modification [Evidence IEA]
COORDINATES: protein motif:HMM:NF012792.2
COORDINATES: protein motif:HMM:NF013479.2
EscU/YscU/HrcU family type III secretion system export apparatus switch protein
COORDINATES: protein motif:HMM:TIGR01189.1
GO:0043190 - ATP-binding cassette (ABC) transporter complex [Evidence IEA]
GO:0015439 - ABC-type heme transporter activity [Evidence IEA]
GO:0015886 - heme transport [Evidence IEA]
heme ABC exporter ATP-binding protein CcmA
COORDINATES: protein motif:HMM:NF015344.2
GO:0015232 - heme transmembrane transporter activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_020410390.1
COORDINATES: similar to AA sequence:RefSeq:WP_015486246.1
GO:0017004 - cytochrome complex assembly [Evidence IEA]; GO:0015886 - heme transport [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_019017068.1
GO:0020037 - heme binding [Evidence IEA]
GO:0017004 - cytochrome complex assembly [Evidence IEA]; GO:0017003 - protein-heme linkage [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011398137.1
COORDINATES: protein motif:HMM:TIGR00385.1
GO:0017004 - cytochrome complex assembly [Evidence IEA]
DsbE family thiol:disulfide interchange protein
COORDINATES: protein motif:HMM:NF015853.2
cytochrome c-type biogenesis protein CcmH
COORDINATES: protein motif:HMM:NF016257.2
GO:0090529 - cell septum assembly [Evidence IEA]
cell division protein ZipA C-terminal FtsZ-binding domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_008044022.1
GO:0003677 - DNA binding [Evidence IEA]; GO:0003911 - DNA ligase (NAD+) activity [Evidence IEA]
GO:0006281 - DNA repair [Evidence IEA]; GO:0006260 - DNA replication [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_010322212.1
COORDINATES: protein motif:HMM:TIGR03197.1
GO:0016645 - oxidoreductase activity, acting on the CH-NH group of donors [Evidence IEA]
FAD-dependent 5-carboxymethylaminomethyl-2-thiouridine(34) oxidoreductase MnmC
COORDINATES: protein motif:HMM:TIGR04211.1
TIGR04211 family SH3 domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_016914815.1
COORDINATES: similar to AA sequence:RefSeq:WP_019017054.1
COORDINATES: similar to AA sequence:RefSeq:WP_010321831.1
GO:0061710 - L-threonylcarbamoyladenylate synthase [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_020583875.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]; GO:0004830 - tryptophan-tRNA ligase activity [Evidence IEA]
GO:0006436 - tryptophanyl-tRNA aminoacylation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_007017339.1
COORDINATES: similar to AA sequence:RefSeq:WP_007020913.1
COORDINATES: similar to AA sequence:RefSeq:WP_009724435.1
COORDINATES: protein motif:HMM:NF006549.0
COORDINATES: similar to AA sequence:RefSeq:WP_011398738.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0003677 - DNA binding [Evidence IEA]; GO:0003916 - DNA topoisomerase activity [Evidence IEA]; GO:0003918 - DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) activity [Evidence IEA]
GO:0006259 - DNA metabolic process [Evidence IEA]; GO:0006265 - DNA topological change [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_007020909.1
GO:0003824 - catalytic activity [Evidence IEA]; GO:0004648 - O-phospho-L-serine:2-oxoglutarate aminotransferase activity [Evidence IEA]
3-phosphoserine/phosphohydroxythreonine transaminase
COORDINATES: similar to AA sequence:RefSeq:WP_016913752.1
GO:0004664 - prephenate dehydratase activity [Evidence IEA]
GO:0009094 - L-phenylalanine biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_015487406.1
GO:0008977 - prephenate dehydrogenase (NAD+) activity [Evidence IEA]
bifunctional prephenate dehydrogenase/3-phosphoshikimate 1-carboxyvinyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_020681634.1
GO:0004127 - cytidylate kinase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_008957327.1
GO:0003723 - RNA binding [Evidence IEA]; GO:0003735 - structural constituent of ribosome [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011398732.1
GO:0006310 - DNA recombination [Evidence IEA]; GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
COORDINATES: protein motif:HMM:NF018058.2
COORDINATES: similar to AA sequence:RefSeq:WP_009835284.1
GO:0004590 - orotidine-5'-phosphate decarboxylase activity [Evidence IEA]
GO:0006207 - 'de novo' pyrimidine nucleobase biosynthetic process [Evidence IEA]; GO:0044205 - 'de novo' UMP biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF024245.2
helix-hairpin-helix domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_013662241.1
TAXI family TRAP transporter solute-binding subunit
COORDINATES: protein motif:HMM:TIGR02123.1
COORDINATES: similar to AA sequence:RefSeq:WP_007020688.1
GO:0009380 - excinuclease repair complex [Evidence IEA]
GO:0005524 - ATP binding [Evidence IEA]; GO:0016887 - ATP hydrolysis activity [Evidence IEA]; GO:0003677 - DNA binding [Evidence IEA]; GO:0016787 - hydrolase activity [Evidence IEA]; GO:0005515 - protein binding [Evidence IEA]
GO:0006289 - nucleotide-excision repair [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_008046343.1
GO:0004829 - threonine-tRNA ligase activity [Evidence IEA]
GO:0006435 - threonyl-tRNA aminoacylation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_007022504.1
COORDINATES: similar to AA sequence:RefSeq:WP_007022505.1
COORDINATES: similar to AA sequence:RefSeq:WP_007151143.1
GO:0019843 - rRNA binding [Evidence IEA]; GO:0003735 - structural constituent of ribosome [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_009724292.1
GO:0009328 - phenylalanine-tRNA ligase complex [Evidence IEA]
GO:0004826 - phenylalanine-tRNA ligase activity [Evidence IEA]
GO:0006432 - phenylalanyl-tRNA aminoacylation [Evidence IEA]
phenylalanine--tRNA ligase subunit alpha
COORDINATES: similar to AA sequence:RefSeq:WP_010324610.1
COORDINATES: similar to AA sequence:RefSeq:WP_012613949.1
COORDINATES: similar to AA sequence:RefSeq:WP_007022510.1
COORDINATES: protein motif:HMM:NF022833.2
COORDINATES: similar to AA sequence:RefSeq:WP_010626295.1
COORDINATES: similar to AA sequence:RefSeq:WP_019815380.1
COORDINATES: similar to AA sequence:RefSeq:WP_020285390.1
COORDINATES: similar to AA sequence:RefSeq:WP_014995635.1
COORDINATES: protein motif:HMM:NF023390.2
COORDINATES: protein motif:HMM:TIGR02096.1
COORDINATES: protein motif:HMM:NF039714.1
COORDINATES: protein motif:HMM:NF020462.2
COORDINATES: protein motif:HMM:NF021996.2
COORDINATES: similar to AA sequence:RefSeq:WP_007017232.1
GO:0051539 - 4 iron, 4 sulfur cluster binding [Evidence IEA]; GO:0003994 - aconitate hydratase activity [Evidence IEA]
bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase
COORDINATES: protein motif:HMM:NF024823.2
COORDINATES: similar to AA sequence:RefSeq:WP_009722313.1
COORDINATES: nucleotide motif:Rfam:14.4:RF01725
SAM-I-IV-variant riboswitch; SAM riboswitches modulate the expression of downstream genes in response to levels of S-adenosylmethionine; Derived by automated computational analysis using gene prediction method: cmsearch.
COORDINATES: protein motif:HMM:NF023125.2
COORDINATES: similar to AA sequence:RefSeq:WP_019017417.1
COORDINATES: similar to AA sequence:RefSeq:WP_019620313.1
COORDINATES: similar to AA sequence:RefSeq:WP_016495366.1
winged helix-turn-helix transcriptional regulator
COORDINATES: similar to AA sequence:RefSeq:WP_012070182.1
GO:0051920 - peroxiredoxin activity [Evidence IEA]
carboxymuconolactone decarboxylase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_009100498.1
zinc ribbon domain-containing protein YjdM
COORDINATES: protein motif:HMM:NF013283.2
COORDINATES: protein motif:HMM:NF016260.2
translocation/assembly module TamB domain-containing protein
COORDINATES: protein motif:HMM:NF014606.2
GO:0015159 - polysaccharide transmembrane transporter activity [Evidence IEA]
GO:0015774 - polysaccharide transport [Evidence IEA]
polysaccharide biosynthesis/export family protein
COORDINATES: similar to AA sequence:RefSeq:WP_008044583.1
GO:0003677 - DNA binding [Evidence IEA]; GO:0000156 - phosphorelay response regulator activity [Evidence IEA]
GO:0045893 - positive regulation of DNA-templated transcription [Evidence IEA]
PEP-CTERM-box response regulator transcription factor
COORDINATES: protein motif:HMM:TIGR02916.1
GO:0000155 - phosphorelay sensor kinase activity [Evidence IEA]; GO:0004673 - protein histidine kinase activity [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR03025.1
undecaprenyl-phosphate glucose phosphotransferase
COORDINATES: protein motif:HMM:NF013793.2
CpsD/CapB family tyrosine-protein kinase
COORDINATES: protein motif:HMM:TIGR04152.1
GO:0004197 - cysteine-type endopeptidase activity [Evidence IEA]
GO:0043687 - post-translational protein modification [Evidence IEA]
COORDINATES: protein motif:HMM:NF024824.2
COORDINATES: protein motif:HMM:NF024571.2
COORDINATES: protein motif:HMM:NF024832.2
COORDINATES: protein motif:HMM:NF025025.2
COORDINATES: protein motif:HMM:NF013884.2
COORDINATES: similar to AA sequence:RefSeq:WP_007020861.1
UDP-N-acetylglucosamine--LPS N-acetylglucosamine transferase
COORDINATES: protein motif:HMM:NF016027.2
GO:0016758 - hexosyltransferase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_008959469.1
GO:0008879 - glucose-1-phosphate thymidylyltransferase activity [Evidence IEA]
GO:0019305 - dTDP-rhamnose biosynthetic process [Evidence IEA]; GO:0009243 - O antigen biosynthetic process [Evidence IEA]
glucose-1-phosphate thymidylyltransferase RfbA
COORDINATES: protein motif:HMM:NF012311.2
COORDINATES: similar to AA sequence:RefSeq:WP_020679330.1
GO:0008830 - dTDP-4-dehydrorhamnose 3,5-epimerase activity [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR01214.1
GO:0008831 - dTDP-4-dehydrorhamnose reductase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_008733620.1
COORDINATES: protein motif:HMM:NF020354.2
GO:0016788 - hydrolase activity, acting on ester bonds [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_007019456.1
COORDINATES: similar to AA sequence:RefSeq:WP_015487579.1
30S ribosomal protein S6--L-glutamate ligase
COORDINATES: protein motif:HMM:NF017434.2
COORDINATES: protein motif:HMM:NF024642.2
COORDINATES: similar to AA sequence:RefSeq:WP_013796126.1
COORDINATES: similar to AA sequence:RefSeq:WP_013331343.1
GO:0003824 - catalytic activity [Evidence IEA]; GO:0050660 - flavin adenine dinucleotide binding [Evidence IEA]
FAD-linked oxidase C-terminal domain-containing protein
COORDINATES: protein motif:HMM:NF016211.2
COORDINATES: protein motif:HMM:NF022818.2
COORDINATES: protein motif:HMM:NF019013.2
nuclear transport factor 2 family protein
COORDINATES: protein motif:HMM:NF024808.2
COORDINATES: similar to AA sequence:RefSeq:WP_007113038.1
COORDINATES: similar to AA sequence:RefSeq:WP_016854459.1
GO:0030638 - polyketide metabolic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF015862.2
COORDINATES: protein motif:HMM:NF015150.2
2-oxoglutarate and iron-dependent oxygenase domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_020582721.1
GO:0050660 - flavin adenine dinucleotide binding [Evidence IEA]; GO:0017150 - tRNA dihydrouridine synthase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011506003.1
COORDINATES: protein motif:HMM:NF027439.2
enoyl-CoA hydratase/isomerase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_019621165.1
COORDINATES: protein motif:HMM:NF012264.2
COORDINATES: similar to AA sequence:RefSeq:WP_011588644.1
COORDINATES: similar to AA sequence:RefSeq:WP_007150118.1
GO:0005507 - copper ion binding [Evidence IEA]; GO:0005375 - copper ion transmembrane transporter activity [Evidence IEA]
copper resistance system multicopper oxidase
COORDINATES: similar to AA sequence:RefSeq:WP_011588646.1
GO:0005507 - copper ion binding [Evidence IEA]; GO:0009055 - electron transfer activity [Evidence IEA]
plastocyanin/azurin family copper-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_008740518.1
frameshifted; internal stop; incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: protein motif:HMM:TIGR02122.1
COORDINATES: protein motif:HMM:NF012485.2
type II and III secretion system protein
COORDINATES: protein motif:HMM:NF013003.2
COORDINATES: protein motif:HMM:NF016292.2
COORDINATES: protein motif:HMM:NF033510.3
COORDINATES: protein motif:HMM:NF014385.2
GO:0015562 - efflux transmembrane transporter activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF024829.2
HlyD family efflux transporter periplasmic adaptor subunit
COORDINATES: protein motif:HMM:TIGR03824.1
GO:0045892 - negative regulation of DNA-templated transcription [Evidence IEA]
flagellar biosynthesis anti-sigma factor FlgM
COORDINATES: similar to AA sequence:RefSeq:WP_020681967.1
COORDINATES: protein motif:HMM:NF012894.2
COORDINATES: protein motif:HMM:NF036531.2
GO:0004866 - endopeptidase inhibitor activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF013100.2
transglycosylase domain-containing protein
COORDINATES: protein motif:HMM:NF023432.2
COORDINATES: similar to AA sequence:RefSeq:WP_020682171.1
heterodisulfide reductase-related iron-sulfur binding cluster
COORDINATES: similar to AA sequence:RefSeq:WP_020682170.1
COORDINATES: protein motif:HMM:NF016985.2
GO:0044780 - bacterial-type flagellum assembly [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR03170.1
GO:0009428 - bacterial-type flagellum basal body, distal rod, P ring [Evidence IEA]
GO:0005198 - structural molecule activity [Evidence IEA]
GO:0001539 - cilium or flagellum-dependent cell motility [Evidence IEA]
flagellar basal body P-ring formation chaperone FlgA
COORDINATES: similar to AA sequence:RefSeq:WP_012068785.1
COORDINATES: protein motif:HMM:TIGR01396.1
GO:0009429 - bacterial-type flagellum basal body, proximal rod [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR01395.1
GO:0009425 - bacterial-type flagellum basal body [Evidence IEA]
COORDINATES: protein motif:HMM:NF025230.2
flagellar hook capping FlgD N-terminal domain-containing protein
COORDINATES: protein motif:HMM:NF004238.1
COORDINATES: protein motif:HMM:NF009280.2
COORDINATES: similar to AA sequence:RefSeq:WP_020409499.1
GO:0009426 - bacterial-type flagellum basal body, distal rod [Evidence IEA]
GO:0071973 - bacterial-type flagellum-dependent cell motility [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_008047085.1
GO:0009427 - bacterial-type flagellum basal body, distal rod, L ring [Evidence IEA]
GO:0003774 - cytoskeletal motor activity [Evidence IEA]
flagellar basal body L-ring protein FlgH
COORDINATES: similar to AA sequence:RefSeq:WP_010325258.1
flagellar basal body P-ring protein FlgI
COORDINATES: protein motif:HMM:TIGR02541.1
GO:0016798 - hydrolase activity, acting on glycosyl bonds [Evidence IEA]
flagellar assembly peptidoglycan hydrolase FlgJ
COORDINATES: protein motif:HMM:TIGR02492.1
GO:0009424 - bacterial-type flagellum hook [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR02550.1
COORDINATES: protein motif:HMM:NF012874.2
COORDINATES: similar to AA sequence:RefSeq:WP_012071237.1
COORDINATES: protein motif:HMM:NF015602.2
COORDINATES: protein motif:HMM:NF018852.2
GO:0009288 - bacterial-type flagellum [Evidence IEA]
GO:0007155 - cell adhesion [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00208.1
COORDINATES: similar to AA sequence:RefSeq:WP_020410480.1
COORDINATES: similar to AA sequence:RefSeq:WP_013795333.1
COORDINATES: similar to AA sequence:RefSeq:WP_020681761.1
flagellar hook-basal body complex protein FliE
COORDINATES: protein motif:HMM:TIGR00206.1
GO:0009431 - bacterial-type flagellum basal body, MS ring [Evidence IEA]
flagellar basal-body MS-ring/collar protein FliF
COORDINATES: similar to AA sequence:RefSeq:WP_015487633.1
GO:0009433 - bacterial-type flagellum basal body, C ring [Evidence IEA]
GO:0006935 - chemotaxis [Evidence IEA]; GO:0001539 - cilium or flagellum-dependent cell motility [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013662353.1
COORDINATES: protein motif:HMM:NF014144.2
COORDINATES: protein motif:HMM:NF024857.2
COORDINATES: similar to AA sequence:RefSeq:WP_011394441.1
COORDINATES: similar to AA sequence:RefSeq:WP_007016153.1
COORDINATES: similar to AA sequence:RefSeq:WP_010324424.1
COORDINATES: similar to AA sequence:RefSeq:WP_015487624.1
protein-glutamate O-methyltransferase CheR
COORDINATES: similar to AA sequence:RefSeq:WP_015487623.1
GO:0050568 - protein-glutamine glutaminase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013334090.1
chemotaxis response regulator protein-glutamate methylesterase
COORDINATES: similar to AA sequence:RefSeq:WP_009835444.1
COORDINATES: protein motif:HMM:NF014207.2
flagellar hook-length control protein FliK
GO:0071973 - bacterial-type flagellum-dependent cell motility [Evidence IEA]; GO:0006935 - chemotaxis [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_007016164.1
COORDINATES: similar to AA sequence:RefSeq:WP_011398923.1
COORDINATES: protein motif:HMM:NF016250.2
GO:0044781 - bacterial-type flagellum organization [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012071104.1
The bacterial flagellar biogenesis protein FliP forms a type III secretion system (T3SS)-type pore required for flagellar assembly; Derived by automated computational analysis using gene prediction method: Protein Homology.
flagellar type III secretion system pore protein FliP
COORDINATES: similar to AA sequence:RefSeq:WP_003214552.1
COORDINATES: protein motif:HMM:TIGR01400.1
GO:0044780 - bacterial-type flagellum assembly [Evidence IEA]; GO:0006605 - protein targeting [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00328.1
COORDINATES: similar to AA sequence:RefSeq:WP_019622963.1
COORDINATES: protein motif:HMM:NF012662.2
COORDINATES: similar to AA sequence:RefSeq:WP_020681744.1
COORDINATES: similar to AA sequence:RefSeq:WP_019811219.1
COORDINATES: similar to AA sequence:RefSeq:WP_011398913.1
COORDINATES: protein motif:HMM:NF016247.2
COORDINATES: similar to AA sequence:RefSeq:WP_009835428.1
COORDINATES: similar to AA sequence:RefSeq:WP_015487601.1
COORDINATES: similar to AA sequence:RefSeq:WP_010225041.1
COORDINATES: protein motif:HMM:NF022428.2
COORDINATES: protein motif:HMM:NF003501.0
COORDINATES: similar to AA sequence:RefSeq:WP_008045462.1
MerR family DNA-binding transcriptional regulator
COORDINATES: protein motif:HMM:NF009586.0
COORDINATES: protein motif:HMM:NF012596.2
GO:0070403 - NAD+ binding [Evidence IEA]
GO:0006631 - fatty acid metabolic process [Evidence IEA]
3-hydroxyacyl-CoA dehydrogenase NAD-binding domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_007016426.1
GO:0016746 - acyltransferase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_008738367.1
COORDINATES: similar to AA sequence:RefSeq:WP_008047677.1
COORDINATES: protein motif:HMM:NF024812.2
COORDINATES: similar to AA sequence:RefSeq:WP_016854470.1
COORDINATES: protein motif:HMM:NF018482.2
invasion associated locus B family protein
COORDINATES: similar to AA sequence:RefSeq:WP_013660885.1
COORDINATES: protein motif:HMM:NF016221.2
COORDINATES: protein motif:HMM:NF014841.2
COORDINATES: protein motif:HMM:NF015859.2
COORDINATES: similar to AA sequence:RefSeq:WP_020287513.1
COORDINATES: similar to AA sequence:RefSeq:WP_009834199.1
COORDINATES: similar to AA sequence:RefSeq:WP_009834198.1
COORDINATES: protein motif:HMM:NF012706.2
COORDINATES: similar to AA sequence:RefSeq:WP_013662887.1
COORDINATES: similar to AA sequence:RefSeq:WP_009834195.1
COORDINATES: similar to AA sequence:RefSeq:WP_003087936.1
COORDINATES: protein motif:HMM:TIGR03413.1
GO:0004416 - hydroxyacylglutathione hydrolase activity [Evidence IEA]
GO:0019243 - methylglyoxal catabolic process to D-lactate via S-lactoyl-glutathione [Evidence IEA]
COORDINATES: protein motif:HMM:NF001299.0
GO:0016787 - hydrolase activity [Evidence IEA]; GO:0000210 - NAD+ diphosphatase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_010628542.1
GO:0003677 - DNA binding [Evidence IEA]; GO:0003887 - DNA-directed DNA polymerase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013796619.1
GO:0003676 - nucleic acid binding [Evidence IEA]; GO:0004523 - RNA-DNA hybrid ribonuclease activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF008745.0
GO:0008233 - peptidase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF025010.2
SurA N-terminal domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_016535194.1
COORDINATES: similar to AA sequence:RefSeq:WP_020583376.1
GO:0016887 - ATP hydrolysis activity [Evidence IEA]; GO:0004176 - ATP-dependent peptidase activity [Evidence IEA]; GO:0043565 - sequence-specific DNA binding [Evidence IEA]; GO:0004252 - serine-type endopeptidase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_020583663.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0016887 - ATP hydrolysis activity [Evidence IEA]; GO:0046983 - protein dimerization activity [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA]
ATP-dependent Clp protease ATP-binding subunit ClpX
COORDINATES: similar to AA sequence:RefSeq:WP_046962299.1
GO:0004176 - ATP-dependent peptidase activity [Evidence IEA]; GO:0004252 - serine-type endopeptidase activity [Evidence IEA]
ATP-dependent Clp endopeptidase proteolytic subunit ClpP
COORDINATES: similar to AA sequence:RefSeq:WP_011588492.1
GO:0005854 - nascent polypeptide-associated complex [Evidence IEA]
GO:0003755 - peptidyl-prolyl cis-trans isomerase activity [Evidence IEA]; GO:0051082 - unfolded protein binding [Evidence IEA]
GO:0051083 - 'de novo' cotranslational protein folding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_019622368.1
GO:0004817 - cysteine-tRNA ligase activity [Evidence IEA]
GO:0006423 - cysteinyl-tRNA aminoacylation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_015487013.1
COORDINATES: protein motif:HMM:NF003743.0
COORDINATES: similar to AA sequence:RefSeq:WP_007114392.1
GO:0045301 - tRNA-(2-methylthio-N-6-(cis-hydroxy)isopentenyl adenosine)-hydroxylase activity [Evidence IEA]
tRNA isopentenyl-2-thiomethyl-A-37 hydroxylase MiaE
COORDINATES: similar to AA sequence:RefSeq:WP_020408886.1
COORDINATES: similar to AA sequence:RefSeq:WP_003088007.1
COORDINATES: protein motif:HMM:NF013739.2
COORDINATES: protein motif:HMM:NF007955.0
COORDINATES: protein motif:HMM:NF018770.2
COORDINATES: similar to AA sequence:RefSeq:WP_015487921.1
cyclopropane-fatty-acyl-phospholipid synthase family protein
COORDINATES: protein motif:HMM:NF022537.2
COORDINATES: protein motif:HMM:TIGR00229.1
COORDINATES: protein motif:HMM:NF024376.2
phosphate/phosphite/phosphonate ABC transporter substrate-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_014994161.1
COORDINATES: protein motif:HMM:NF008748.0
GO:0003723 - RNA binding [Evidence IEA]; GO:0008990 - rRNA (guanine-N2-)-methyltransferase activity [Evidence IEA]
bifunctional 23S rRNA (guanine(2069)-N(7))-methyltransferase RlmK/23S rRNA (guanine(2445)-N(2))-methyltransferase RlmL
COORDINATES: similar to AA sequence:RefSeq:WP_007111057.1
COORDINATES: similar to AA sequence:RefSeq:WP_009096994.1
GO:0004152 - dihydroorotate dehydrogenase activity [Evidence IEA]
GO:0006222 - UMP biosynthetic process [Evidence IEA]
quinone-dependent dihydroorotate dehydrogenase
COORDINATES: protein motif:HMM:NF022644.2
COORDINATES: protein motif:HMM:NF016944.2
COORDINATES: protein motif:HMM:TIGR02414.1
GO:0004177 - aminopeptidase activity [Evidence IEA]; GO:0008237 - metallopeptidase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_008928157.1
COORDINATES: protein motif:HMM:NF013827.2
GO:0004252 - serine-type endopeptidase activity [Evidence IEA]
rhomboid family intramembrane serine protease
COORDINATES: protein motif:HMM:NF012376.2
COORDINATES: protein motif:HMM:NF002306.0
GO:0003951 - NAD+ kinase activity [Evidence IEA]
GO:0006741 - NADP biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_009833732.1
COORDINATES: protein motif:HMM:TIGR01447.1
GO:0009338 - exodeoxyribonuclease V complex [Evidence IEA]
GO:0008854 - exodeoxyribonuclease V activity [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00609.1
COORDINATES: protein motif:HMM:TIGR01450.1
COORDINATES: similar to AA sequence:RefSeq:WP_008046625.1
NAD(P)(+) transhydrogenase (Re/Si-specific) subunit beta
COORDINATES: similar to AA sequence:RefSeq:WP_016915316.1
GO:0008746 - NAD(P)+ transhydrogenase activity [Evidence IEA]
Re/Si-specific NAD(P)(+) transhydrogenase subunit alpha
COORDINATES: similar to AA sequence:RefSeq:WP_011397825.1
GO:0008444 - CDP-diacylglycerol-glycerol-3-phosphate 3-phosphatidyltransferase activity [Evidence IEA]
CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_010323841.1
GO:0009381 - excinuclease ABC activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011588413.1
GO:0050380 - undecaprenyl-diphosphatase activity [Evidence IEA]
GO:0016311 - dephosphorylation [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR03725.1
GO:0003725 - double-stranded RNA binding [Evidence IEA]
tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex dimerization subunit type 1 TsaB
COORDINATES: similar to AA sequence:RefSeq:WP_011588124.1
GO:0004017 - adenylate kinase activity [Evidence IEA]; GO:0005524 - ATP binding [Evidence IEA]
GO:0006139 - nucleobase-containing compound metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_018915855.1
GO:0008964 - phosphoenolpyruvate carboxylase activity [Evidence IEA]
GO:0015977 - carbon fixation [Evidence IEA]; GO:0006099 - tricarboxylic acid cycle [Evidence IEA]
COORDINATES: protein motif:HMM:NF007113.1
nucleoside triphosphate pyrophosphohydrolase
COORDINATES: similar to AA sequence:RefSeq:WP_013332768.1
GO:0015969 - guanosine tetraphosphate metabolic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF009639.0
23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD
COORDINATES: similar to AA sequence:RefSeq:WP_019623260.1
GO:0004124 - cysteine synthase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_020683533.1
COORDINATES: similar to AA sequence:RefSeq:WP_020285577.1
putative 4-hydroxy-4-methyl-2-oxoglutarate aldolase
COORDINATES: similar to AA sequence:RefSeq:WP_011396023.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0008986 - pyruvate, water dikinase activity [Evidence IEA]; GO:0016772 - transferase activity, transferring phosphorus-containing groups [Evidence IEA]
GO:0016310 - phosphorylation [Evidence IEA]; GO:0006090 - pyruvate metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011396022.1
pyruvate, water dikinase regulatory protein
COORDINATES: protein motif:HMM:NF012514.2
COORDINATES: similar to AA sequence:RefSeq:WP_016914368.1
COORDINATES: similar to AA sequence:RefSeq:WP_019622232.1
cytochrome-c oxidase, cbb3-type subunit I
COORDINATES: similar to AA sequence:RefSeq:WP_009834956.1
cytochrome-c oxidase, cbb3-type subunit II
COORDINATES: similar to AA sequence:RefSeq:WP_003087298.1
cbb3-type cytochrome c oxidase subunit 3
COORDINATES: similar to AA sequence:RefSeq:WP_007113797.1
cytochrome-c oxidase, cbb3-type subunit III
COORDINATES: similar to AA sequence:RefSeq:WP_008042666.1
GO:0008535 - respiratory chain complex IV assembly [Evidence IEA]
cytochrome c oxidase accessory protein CcoG
COORDINATES: protein motif:HMM:NF017559.2
COORDINATES: protein motif:HMM:TIGR01525.1
COORDINATES: similar to AA sequence:RefSeq:WP_016853649.1
cbb3-type cytochrome oxidase assembly protein CcoS
COORDINATES: protein motif:HMM:NF024778.2
COORDINATES: protein motif:HMM:NF006601.0
COORDINATES: protein motif:HMM:NF021824.2
DUF294 nucleotidyltransferase-like domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_011589436.1
COORDINATES: similar to AA sequence:RefSeq:WP_010325310.1
COORDINATES: similar to AA sequence:RefSeq:WP_013662115.1
COORDINATES: similar to AA sequence:RefSeq:WP_011395679.1
GO:0004585 - ornithine carbamoyltransferase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011395970.1
GO:0006282 - regulation of DNA repair [Evidence IEA]; GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_007017743.1
GO:0003677 - DNA binding [Evidence IEA]; GO:0003917 - DNA topoisomerase type I (single strand cut, ATP-independent) activity [Evidence IEA]
GO:0006260 - DNA replication [Evidence IEA]; GO:0006265 - DNA topological change [Evidence IEA]
COORDINATES: protein motif:HMM:NF014757.2
COORDINATES: protein motif:HMM:NF013213.2
COORDINATES: protein motif:HMM:NF016222.2
COORDINATES: protein motif:HMM:NF022723.2
COORDINATES: similar to AA sequence:RefSeq:WP_007113140.1
COORDINATES: similar to AA sequence:RefSeq:WP_010323281.1
GO:0018454 - acetoacetyl-CoA reductase activity [Evidence IEA]
GO:0042619 - poly-hydroxybutyrate biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_020682806.1
COORDINATES: protein motif:HMM:TIGR01838.1
class I poly(R)-hydroxyalkanoic acid synthase
COORDINATES: protein motif:HMM:TIGR01849.1
COORDINATES: similar to AA sequence:RefSeq:WP_013332291.1
GO:0030729 - acetoacetate-CoA ligase activity [Evidence IEA]
GO:0019287 - isopentenyl diphosphate biosynthetic process, mevalonate pathway [Evidence IEA]
COORDINATES: protein motif:HMM:NF025141.2
GGDEF domain-containing phosphodiesterase
COORDINATES: protein motif:HMM:NF012640.2
COORDINATES: protein motif:HMM:NF015000.2
COORDINATES: protein motif:HMM:NF018924.2
COORDINATES: protein motif:HMM:NF003816.0
COORDINATES: protein motif:HMM:NF025217.2
COORDINATES: similar to AA sequence:RefSeq:WP_009100342.1
GO:0004024 - alcohol dehydrogenase activity, zinc-dependent [Evidence IEA]; GO:0051903 - S-(hydroxymethyl)glutathione dehydrogenase activity [Evidence IEA]
GO:0006113 - fermentation [Evidence IEA]; GO:0009404 - toxin metabolic process [Evidence IEA]
S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase
COORDINATES: protein motif:HMM:TIGR02821.1
GO:0018738 - S-formylglutathione hydrolase activity [Evidence IEA]
GO:0046292 - formaldehyde metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_009835659.1
class II aldolase/adducin family protein
COORDINATES: similar to AA sequence:RefSeq:WP_009835660.1
COORDINATES: similar to AA sequence:RefSeq:WP_009835663.1
LysR substrate-binding domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_016855288.1
aromatic ring-hydroxylating dioxygenase subunit alpha
COORDINATES: protein motif:HMM:TIGR01186.1
GO:0043190 - ATP-binding cassette (ABC) transporter complex [Evidence IEA]; GO:0009898 - cytoplasmic side of plasma membrane [Evidence IEA]
GO:0015837 - amine transport [Evidence IEA]
Members of the family are the ATP-binding subunit of ABC transporters for substrates such as betaine, L-proline or other amino acids, choline, carnitine, etc. The substrate specificity is best determined from the substrate-binding subunit, rather than this subunit, as it interacts with the permease subunit and not with substrate directly; Derived by automated computational analysis using gene prediction method: Protein Homology.
betaine/proline/choline family ABC transporter ATP-binding protein
COORDINATES: protein motif:HMM:NF015995.2
glycine betaine ABC transporter substrate-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_016855642.1
COORDINATES: similar to AA sequence:RefSeq:WP_020681801.1
hybrid-cluster NAD(P)-dependent oxidoreductase
COORDINATES: similar to AA sequence:RefSeq:WP_019620199.1
COORDINATES: similar to AA sequence:RefSeq:WP_019620221.1
COORDINATES: similar to AA sequence:RefSeq:WP_002555667.1
COORDINATES: similar to AA sequence:RefSeq:WP_016855643.1
COORDINATES: similar to AA sequence:RefSeq:WP_013660854.1
GO:0051539 - 4 iron, 4 sulfur cluster binding [Evidence IEA]; GO:0003941 - L-serine ammonia-lyase activity [Evidence IEA]
GO:0009063 - amino acid catabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_019620205.1
GO:0008864 - formyltetrahydrofolate deformylase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF016180.2
sarcosine oxidase subunit gamma family protein
COORDINATES: similar to AA sequence:RefSeq:WP_013660851.1
GO:0008115 - sarcosine oxidase activity [Evidence IEA]
sarcosine oxidase subunit alpha family protein
COORDINATES: similar to AA sequence:RefSeq:WP_013660850.1
COORDINATES: similar to AA sequence:RefSeq:WP_008365064.1
GO:0046653 - tetrahydrofolate metabolic process [Evidence IEA]
sarcosine oxidase subunit beta family protein
COORDINATES: protein motif:HMM:NF013200.2
electron transfer flavoprotein subunit alpha/FixB family protein
COORDINATES: similar to AA sequence:RefSeq:WP_019018893.1
COORDINATES: similar to AA sequence:RefSeq:WP_019950091.1
COORDINATES: protein motif:HMM:NF012766.2
COORDINATES: protein motif:HMM:NF019315.2
COORDINATES: protein motif:HMM:NF023939.2
COORDINATES: similar to AA sequence:RefSeq:WP_020285285.1
GO:0070573 - metallodipeptidase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_010323693.1
COORDINATES: protein motif:HMM:NF012354.2
LysR family transcriptional regulator substrate-binding protein
COORDINATES: protein motif:HMM:TIGR01372.1
COORDINATES: protein motif:HMM:NF016179.2
COORDINATES: similar to AA sequence:RefSeq:WP_013331655.1
COORDINATES: similar to AA sequence:RefSeq:WP_020406448.1
GO:0051539 - 4 iron, 4 sulfur cluster binding [Evidence IEA]
NADH-ubiquinone oxidoreductase-F iron-sulfur binding region domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_020680906.1
GO:0008863 - formate dehydrogenase (NAD+) activity [Evidence IEA]
GO:0015942 - formate metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_016854452.1
GO:0009061 - anaerobic respiration [Evidence IEA]; GO:0015942 - formate metabolic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF022832.2
COORDINATES: protein motif:HMM:NF013694.2
COORDINATES: similar to AA sequence:RefSeq:WP_008045260.1
COORDINATES: protein motif:HMM:NF017426.2
COORDINATES: similar to AA sequence:RefSeq:WP_016916233.1
sigma-54-dependent Fis family transcriptional regulator
COORDINATES: protein motif:HMM:NF016999.2
COORDINATES: similar to AA sequence:RefSeq:WP_008046083.1
COORDINATES: protein motif:HMM:NF018979.2
tripartite tricarboxylate transporter TctB family protein
COORDINATES: similar to AA sequence:RefSeq:WP_020287265.1
tripartite tricarboxylate transporter substrate-binding protein
COORDINATES: protein motif:HMM:NF020110.2
COORDINATES: protein motif:HMM:NF024921.2
COORDINATES: similar to AA sequence:RefSeq:WP_016854035.1
GO:0046912 - acyltransferase activity, acyl groups converted into alkyl on transfer [Evidence IEA]
COORDINATES: protein motif:HMM:NF014564.2
COORDINATES: similar to AA sequence:RefSeq:WP_020680258.1
COORDINATES: similar to AA sequence:RefSeq:WP_016854245.1
COORDINATES: protein motif:HMM:NF016107.2
isoprenylcysteine carboxylmethyltransferase family protein
COORDINATES: protein motif:HMM:NF012242.2
COORDINATES: similar to AA sequence:RefSeq:WP_008045250.1
COORDINATES: similar to AA sequence:RefSeq:WP_020680624.1
COORDINATES: similar to AA sequence:RefSeq:WP_019811157.1
GO:0047448 - 5-dehydro-4-deoxyglucarate dehydratase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_020680620.1
COORDINATES: similar to AA sequence:RefSeq:WP_013797697.1
COORDINATES: protein motif:HMM:TIGR01313.1
COORDINATES: similar to AA sequence:RefSeq:WP_020683342.1
GO:0008740 - L-rhamnose isomerase activity [Evidence IEA]
GO:0019301 - rhamnose catabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013795003.1
bifunctional rhamnulose-1-phosphate aldolase/short-chain dehydrogenase
COORDINATES: similar to AA sequence:RefSeq:WP_020288085.1
DeoR/GlpR family DNA-binding transcription regulator
COORDINATES: similar to AA sequence:RefSeq:WP_020288084.1
GO:0055052 - ATP-binding cassette (ABC) transporter complex, substrate-binding subunit-containing [Evidence IEA]; GO:0009897 - external side of plasma membrane [Evidence IEA]; GO:0030288 - outer membrane-bounded periplasmic space [Evidence IEA]
GO:0033296 - rhamnose binding [Evidence IEA]; GO:0015153 - rhamnose transmembrane transporter activity [Evidence IEA]
GO:0015762 - rhamnose transmembrane transport [Evidence IEA]
rhamnose ABC transporter substrate-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_013795006.1
sugar ABC transporter ATP-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_020683347.1
COORDINATES: similar to AA sequence:RefSeq:WP_020683348.1
COORDINATES: similar to AA sequence:RefSeq:WP_020683349.1
GO:0016857 - racemase and epimerase activity, acting on carbohydrates and derivatives [Evidence IEA]
COORDINATES: protein motif:HMM:NF012589.2
GO:0016773 - phosphotransferase activity, alcohol group as acceptor [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011898609.1
DDE-type integrase/transposase/recombinase
COORDINATES: similar to AA sequence:RefSeq:WP_007112805.1
COORDINATES: similar to AA sequence:RefSeq:WP_012069186.1
COORDINATES: protein motif:HMM:NF019368.2
GO:0004559 - alpha-mannosidase activity [Evidence IEA]
GO:0006013 - mannose metabolic process [Evidence IEA]
glycoside hydrolase family 38 C-terminal domain-containing protein
COORDINATES: protein motif:HMM:NF036773.2
COORDINATES: protein motif:HMM:NF012371.2
COORDINATES: similar to AA sequence:RefSeq:WP_020284509.1
COORDINATES: protein motif:HMM:NF012437.2
adenylate/guanylate cyclase domain-containing protein
COORDINATES: protein motif:HMM:NF026169.2
NADPH-dependent 7-cyano-7-deazaguanine reductase QueF
COORDINATES: similar to AA sequence:RefSeq:WP_011398260.1
COORDINATES: similar to AA sequence:RefSeq:WP_019952697.1
COORDINATES: similar to AA sequence:RefSeq:WP_007150456.1
COORDINATES: similar to AA sequence:RefSeq:WP_020584342.1
GO:0003983 - UTP:glucose-1-phosphate uridylyltransferase activity [Evidence IEA]
GO:0009225 - nucleotide-sugar metabolic process [Evidence IEA]
UTP--glucose-1-phosphate uridylyltransferase GalU
COORDINATES: protein motif:HMM:NF017319.2
COORDINATES: protein motif:HMM:NF024820.2
COORDINATES: protein motif:HMM:NF025014.2
pilus assembly protein N-terminal domain-containing protein
COORDINATES: protein motif:HMM:NF020250.2
COORDINATES: similar to AA sequence:RefSeq:WP_013660312.1
GO:0016684 - oxidoreductase activity, acting on peroxide as acceptor [Evidence IEA]; GO:0008379 - thioredoxin peroxidase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF025759.2
RimK-like ATPgrasp N-terminal domain-containing protein
COORDINATES: protein motif:HMM:NF025054.2
COORDINATES: protein motif:HMM:NF016207.2
FMN-binding negative transcriptional regulator
COORDINATES: similar to AA sequence:RefSeq:WP_009721955.1
NAD(P)H-dependent glycerol-3-phosphate dehydrogenase
COORDINATES: protein motif:HMM:NF000658.1
COORDINATES: similar to AA sequence:RefSeq:WP_008734211.1
COORDINATES: similar to AA sequence:RefSeq:WP_020410032.1
COORDINATES: protein motif:HMM:NF008729.0
GO:0005524 - ATP binding [Evidence IEA]; GO:0003677 - DNA binding [Evidence IEA]; GO:0003678 - DNA helicase activity [Evidence IEA]; GO:0016818 - hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides [Evidence IEA]
COORDINATES: protein motif:HMM:NF023299.2
COORDINATES: similar to AA sequence:RefSeq:WP_010324266.1
COORDINATES: similar to AA sequence:RefSeq:WP_008043339.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0003824 - catalytic activity [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]
ADP-forming succinate--CoA ligase subunit beta
COORDINATES: similar to AA sequence:RefSeq:WP_013795793.1
GO:0004148 - dihydrolipoyl dehydrogenase activity [Evidence IEA]
GO:0045454 - cell redox homeostasis [Evidence IEA]; GO:0051068 - dihydrolipoamide metabolic process [Evidence IEA]; GO:0006096 - glycolytic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_010324263.1
GO:0045252 - oxoglutarate dehydrogenase complex [Evidence IEA]
GO:0004149 - dihydrolipoyllysine-residue succinyltransferase activity [Evidence IEA]
2-oxoglutarate dehydrogenase complex dihydrolipoyllysine-residue succinyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_010324262.1
GO:0004591 - oxoglutarate dehydrogenase (succinyl-transferring) activity [Evidence IEA]; GO:0030976 - thiamine pyrophosphate binding [Evidence IEA]
2-oxoglutarate dehydrogenase E1 component
COORDINATES: similar to AA sequence:RefSeq:WP_009831775.1
succinate dehydrogenase iron-sulfur subunit
COORDINATES: similar to AA sequence:RefSeq:WP_019621582.1
GO:0050660 - flavin adenine dinucleotide binding [Evidence IEA]; GO:0016627 - oxidoreductase activity, acting on the CH-CH group of donors [Evidence IEA]
GO:0022900 - electron transport chain [Evidence IEA]; GO:0006099 - tricarboxylic acid cycle [Evidence IEA]
succinate dehydrogenase flavoprotein subunit
COORDINATES: similar to AA sequence:RefSeq:WP_016914532.1
GO:0045282 - plasma membrane succinate dehydrogenase complex [Evidence IEA]
GO:0000104 - succinate dehydrogenase activity [Evidence IEA]
succinate dehydrogenase, hydrophobic membrane anchor protein
COORDINATES: protein motif:HMM:TIGR02970.1
succinate dehydrogenase, cytochrome b556 subunit
COORDINATES: similar to AA sequence:RefSeq:WP_008928437.1
GO:0004108 - citrate (Si)-synthase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF013401.2
COORDINATES: similar to AA sequence:RefSeq:WP_009287292.1
GO:0009332 - glutamate-tRNA ligase complex [Evidence IEA]
GO:0004818 - glutamate-tRNA ligase activity [Evidence IEA]
GO:0006424 - glutamyl-tRNA aminoacylation [Evidence IEA]
COORDINATES: protein motif:HMM:NF013014.2
COORDINATES: protein motif:HMM:NF008774.0
GO:0002943 - tRNA dihydrouridine synthesis [Evidence IEA]
tRNA dihydrouridine(20/20a) synthase DusA
COORDINATES: similar to AA sequence:RefSeq:WP_010325394.1
GO:0004801 - transaldolase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF018884.2
COORDINATES: protein motif:HMM:NF016236.2
COORDINATES: protein motif:HMM:TIGR01967.1
GO:0004386 - helicase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_009101510.1
COORDINATES: protein motif:HMM:NF024628.2
COORDINATES: protein motif:HMM:NF012298.2
GO:0004672 - protein kinase activity [Evidence IEA]
GO:0006468 - protein phosphorylation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_007148526.1
nucleotide 5'-monophosphate nucleosidase PpnN
COORDINATES: similar to AA sequence:RefSeq:WP_014996142.1
GO:0002161 - aminoacyl-tRNA editing activity [Evidence IEA]
GO:0043039 - tRNA aminoacylation [Evidence IEA]
COORDINATES: protein motif:HMM:NF015297.2
COORDINATES: protein motif:HMM:NF013847.2
cobalamin-independent methionine synthase II family protein
COORDINATES: similar to AA sequence:RefSeq:WP_010628738.1
GO:0004399 - histidinol dehydrogenase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_016854472.1
COORDINATES: similar to AA sequence:RefSeq:WP_004646136.1
ferric iron uptake transcriptional regulator
COORDINATES: protein motif:HMM:NF016258.2
outer membrane protein assembly factor BamE
COORDINATES: similar to AA sequence:RefSeq:WP_007017237.1
COORDINATES: similar to AA sequence:RefSeq:WP_009833110.1
glycine betaine/L-proline ABC transporter ATP-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_020406009.1
proline/glycine betaine ABC transporter permease
COORDINATES: protein motif:HMM:NF017868.2
COORDINATES: protein motif:HMM:TIGR00557.1
GO:0050570 - 4-hydroxythreonine-4-phosphate dehydrogenase activity [Evidence IEA]
4-hydroxythreonine-4-phosphate dehydrogenase PdxA
COORDINATES: similar to AA sequence:RefSeq:WP_015486054.1
COORDINATES: similar to AA sequence:RefSeq:WP_018917318.1
COORDINATES: protein motif:HMM:NF017760.2
COORDINATES: similar to AA sequence:RefSeq:WP_008929017.1
COORDINATES: protein motif:HMM:NF012464.2
COORDINATES: similar to AA sequence:RefSeq:WP_009722250.1
GO:0051983 - regulation of chromosome segregation [Evidence IEA]
type II toxin-antitoxin system ParD family antitoxin
COORDINATES: similar to AA sequence:RefSeq:WP_009722255.1
type II toxin-antitoxin system RelE/ParE family toxin
COORDINATES: protein motif:HMM:NF012318.2
COORDINATES: protein motif:HMM:NF027613.2
COORDINATES: similar to AA sequence:RefSeq:WP_009521752.1
COORDINATES: similar to AA sequence:RefSeq:WP_018274652.1
GO:0003677 - DNA binding [Evidence IEA]; GO:0000150 - DNA strand exchange activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF022598.2
COORDINATES: similar to AA sequence:RefSeq:WP_009521747.1
COORDINATES: similar to AA sequence:RefSeq:WP_012080593.1
COORDINATES: similar to AA sequence:RefSeq:WP_013105909.1
COORDINATES: similar to AA sequence:RefSeq:WP_011399404.1
COORDINATES: similar to AA sequence:RefSeq:WP_020406573.1
COORDINATES: similar to AA sequence:RefSeq:WP_020406572.1
COORDINATES: protein motif:HMM:NF039802.1
COORDINATES: similar to AA sequence:RefSeq:WP_020406570.1
COORDINATES: similar to AA sequence:RefSeq:WP_020406569.1
COORDINATES: similar to AA sequence:RefSeq:WP_009521799.1
COORDINATES: protein motif:HMM:NF040389.1
COORDINATES: protein motif:HMM:NF019896.2
D-Ala-D-Ala carboxypeptidase family metallohydrolase
COORDINATES: similar to AA sequence:RefSeq:WP_020406566.1
COORDINATES: protein motif:HMM:NF023420.2
COORDINATES: similar to AA sequence:RefSeq:WP_015914460.1
COORDINATES: similar to AA sequence:RefSeq:WP_004629278.1
COORDINATES: protein motif:HMM:NF017673.2
frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
phage terminase large subunit family protein
COORDINATES: protein motif:HMM:NF014846.2
GO:0019058 - viral life cycle [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR01539.1
GO:0044423 - virion component [Evidence IEA]
GO:0019068 - virion assembly [Evidence IEA]
COORDINATES: protein motif:HMM:NF013506.2
COORDINATES: protein motif:HMM:NF014921.2
COORDINATES: protein motif:HMM:NF015802.2
COORDINATES: protein motif:HMM:NF040424.1
COORDINATES: protein motif:HMM:NF039819.1
COORDINATES: protein motif:HMM:NF040129.1
phage tail tape measure C-terminal domain-containing protein
COORDINATES: protein motif:HMM:NF012632.2
COORDINATES: protein motif:HMM:NF020449.2
COORDINATES: protein motif:HMM:NF013073.2
COORDINATES: protein motif:HMM:NF040662.1
host specificity factor TipJ family phage tail protein
COORDINATES: similar to AA sequence:RefSeq:WP_020200523.1
COORDINATES: similar to AA sequence:RefSeq:WP_020200522.1
COORDINATES: similar to AA sequence:RefSeq:WP_007020998.1
COORDINATES: protein motif:HMM:NF020874.2
COORDINATES: similar to AA sequence:RefSeq:WP_010629482.1
COORDINATES: protein motif:HMM:NF025072.2
COORDINATES: protein motif:HMM:NF014051.2
COORDINATES: similar to AA sequence:RefSeq:WP_007111016.1
DegT/DnrJ/EryC1/StrS family aminotransferase
COORDINATES: protein motif:HMM:NF024206.2
GO:0016742 - hydroxymethyl-, formyl- and related transferase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_007111018.1
FdtA/QdtA family cupin domain-containing protein
COORDINATES: protein motif:HMM:NF016228.2
COORDINATES: similar to AA sequence:RefSeq:WP_001764656.1
COORDINATES: similar to AA sequence:RefSeq:WP_019620711.1
COORDINATES: similar to AA sequence:RefSeq:WP_012068556.1
GO:0008460 - dTDP-glucose 4,6-dehydratase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011978625.1
COORDINATES: protein motif:HMM:NF019147.2
plasmid partitioning protein RepB C-terminal domain-containing protein
ParB N-terminal domain-containing protein
COORDINATES: protein motif:HMM:NF006534.0
transcription/translation regulatory transformer protein RfaH
COORDINATES: protein motif:HMM:NF025179.2
GO:0009103 - lipopolysaccharide biosynthetic process [Evidence IEA]
Wzz/FepE/Etk N-terminal domain-containing protein
COORDINATES: protein motif:HMM:NF014740.2
COORDINATES: similar to AA sequence:RefSeq:WP_012080596.1
type II toxin-antitoxin system Phd/YefM family antitoxin
COORDINATES: protein motif:HMM:NF013465.2
GO:0046872 - metal ion binding [Evidence IEA]
zinc ABC transporter substrate-binding protein
COORDINATES: protein motif:HMM:NF013629.2
COORDINATES: similar to AA sequence:RefSeq:WP_013659403.1
metal ABC transporter ATP-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_007112516.1
GO:0043190 - ATP-binding cassette (ABC) transporter complex [Evidence IEA]; GO:0005886 - plasma membrane [Evidence IEA]
GO:0042626 - ATPase-coupled transmembrane transporter activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF013718.2
COORDINATES: protein motif:HMM:NF013391.2
COORDINATES: protein motif:HMM:NF028537.1
GO:0016772 - transferase activity, transferring phosphorus-containing groups [Evidence IEA]
phosphoethanolamine--lipid A transferase
COORDINATES: similar to AA sequence:RefSeq:WP_020680126.1
COORDINATES: protein motif:HMM:NF024874.2
COORDINATES: protein motif:HMM:NF014627.2
COORDINATES: protein motif:HMM:NF014663.2
biotin-dependent carboxyltransferase family protein
COORDINATES: protein motif:HMM:NF014712.2
COORDINATES: protein motif:HMM:NF024258.2
COORDINATES: protein motif:HMM:NF008761.0
GO:0016872 - intramolecular lyase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_015485629.1
GO:0004072 - aspartate kinase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014995430.1
GO:0004813 - alanine-tRNA ligase activity [Evidence IEA]
GO:0006419 - alanyl-tRNA aminoacylation [Evidence IEA]
COORDINATES: protein motif:HMM:NF013382.2
metalloregulator ArsR/SmtB family transcription factor
COORDINATES: similar to AA sequence:RefSeq:WP_008957948.1
GO:0008705 - methionine synthase activity [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA]
COORDINATES: protein motif:HMM:NF025167.2
COORDINATES: protein motif:HMM:NF022135.2
COORDINATES: protein motif:HMM:NF014296.2
GO:0004489 - methylenetetrahydrofolate reductase (NAD(P)H) activity [Evidence IEA]
methylenetetrahydrofolate reductase [NAD(P)H]
COORDINATES: similar to AA sequence:RefSeq:WP_016853508.1
COORDINATES: similar to AA sequence:RefSeq:WP_007019620.1
COORDINATES: protein motif:HMM:NF007966.0
GO:0005524 - ATP binding [Evidence IEA]; GO:0003684 - damaged DNA binding [Evidence IEA]; GO:0003676 - nucleic acid binding [Evidence IEA]
COORDINATES: protein motif:HMM:NF022425.2
COORDINATES: similar to AA sequence:RefSeq:WP_020682250.1
hypoxanthine-guanine phosphoribosyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_008735273.1
mechanosensitive ion channel family protein
COORDINATES: protein motif:HMM:NF024989.2
COORDINATES: similar to AA sequence:RefSeq:WP_013331341.1
GO:0051536 - iron-sulfur cluster binding [Evidence IEA]
COORDINATES: protein motif:HMM:NF008439.0
GO:0071949 - FAD binding [Evidence IEA]; GO:0016491 - oxidoreductase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_017429682.1
COORDINATES: protein motif:HMM:NF017470.2
COORDINATES: protein motif:HMM:TIGR01276.1
GO:0048502 - ABC-type thiamine transporter activity [Evidence IEA]; GO:0030975 - thiamine binding [Evidence IEA]; GO:0030976 - thiamine pyrophosphate binding [Evidence IEA]
GO:0030974 - thiamine pyrophosphate transmembrane transport [Evidence IEA]; GO:0015888 - thiamine transport [Evidence IEA]
thiamine ABC transporter substrate binding subunit
COORDINATES: nucleotide motif:Rfam:14.4:RF00059
TPP riboswitch; Derived by automated computational analysis using gene prediction method: cmsearch.
COORDINATES: protein motif:HMM:TIGR01378.1
GO:0004788 - thiamine diphosphokinase activity [Evidence IEA]
GO:0006772 - thiamine metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_019620699.1
GO:0008094 - ATP-dependent activity, acting on DNA [Evidence IEA]; GO:0003677 - DNA binding [Evidence IEA]
GO:0006310 - DNA recombination [Evidence IEA]; GO:0006281 - DNA repair [Evidence IEA]; GO:0009432 - SOS response [Evidence IEA]
COORDINATES: protein motif:HMM:NF012529.2
COORDINATES: protein motif:HMM:NF021367.2
COORDINATES: similar to AA sequence:RefSeq:WP_009831782.1
GO:0004641 - phosphoribosylformylglycinamidine cyclo-ligase activity [Evidence IEA]
GO:0006189 - 'de novo' IMP biosynthetic process [Evidence IEA]; GO:0009152 - purine ribonucleotide biosynthetic process [Evidence IEA]
phosphoribosylformylglycinamidine cyclo-ligase
COORDINATES: similar to AA sequence:RefSeq:WP_008043752.1
GO:0004644 - phosphoribosylglycinamide formyltransferase activity [Evidence IEA]
phosphoribosylglycinamide formyltransferase
COORDINATES: protein motif:HMM:NF022750.2
COORDINATES: similar to AA sequence:RefSeq:WP_019951274.1
COORDINATES: similar to AA sequence:RefSeq:WP_013332063.1
GO:0002161 - aminoacyl-tRNA editing activity [Evidence IEA]; GO:0004812 - aminoacyl-tRNA ligase activity [Evidence IEA]; GO:0005524 - ATP binding [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]; GO:0004827 - proline-tRNA ligase activity [Evidence IEA]
GO:0006433 - prolyl-tRNA aminoacylation [Evidence IEA]; GO:0006418 - tRNA aminoacylation for protein translation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_007016894.1
transglycosylase SLT domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_015487447.1
COORDINATES: protein motif:HMM:NF021369.2
COORDINATES: similar to AA sequence:RefSeq:WP_007149482.1
CPXCG motif-containing cysteine-rich protein
COORDINATES: protein motif:HMM:NF012422.2
COORDINATES: protein motif:HMM:NF027363.2
COORDINATES: similar to AA sequence:RefSeq:WP_010629135.1
GO:0004015 - adenosylmethionine-8-amino-7-oxononanoate transaminase activity [Evidence IEA]
adenosylmethionine--8-amino-7-oxononanoate transaminase
COORDINATES: similar to AA sequence:RefSeq:WP_007019492.1
COORDINATES: similar to AA sequence:RefSeq:WP_020583448.1
GO:0004451 - isocitrate lyase activity [Evidence IEA]
GO:0019752 - carboxylic acid metabolic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF014325.2
COORDINATES: similar to AA sequence:RefSeq:WP_007019633.1
GO:0016615 - malate dehydrogenase activity [Evidence IEA]
GO:0006108 - malate metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013659852.1
COORDINATES: protein motif:HMM:NF010621.0
COORDINATES: similar to AA sequence:RefSeq:WP_020407907.1
COORDINATES: similar to AA sequence:RefSeq:WP_001831963.1
GO:0019464 - glycine decarboxylation via glycine cleavage system [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_019018016.1
GO:0051539 - 4 iron, 4 sulfur cluster binding [Evidence IEA]; GO:0016992 - lipoate synthase activity [Evidence IEA]; GO:1904047 - S-adenosyl-L-methionine binding [Evidence IEA]
GO:0009107 - lipoate biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011588550.1
GO:0004474 - malate synthase activity [Evidence IEA]
GO:0006097 - glyoxylate cycle [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_016854314.1
GO:0008897 - holo-[acyl-carrier-protein] synthase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_007151190.1
GO:0033856 - pyridoxine 5'-phosphate synthase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF014607.2
COORDINATES: similar to AA sequence:RefSeq:WP_014993894.1
GO:0005525 - GTP binding [Evidence IEA]; GO:0003723 - RNA binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013332776.1
GO:0004525 - ribonuclease III activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF027463.2
COORDINATES: similar to AA sequence:RefSeq:WP_019018690.1
GO:0009306 - protein secretion [Evidence IEA]; GO:0006465 - signal peptide processing [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_008046509.1
COORDINATES: similar to AA sequence:RefSeq:WP_012068819.1
COORDINATES: protein motif:HMM:NF016160.2
SoxR reducing system RseC family protein
COORDINATES: protein motif:HMM:NF015825.2
MucB/RseB C-terminal domain-containing protein
COORDINATES: protein motif:HMM:NF015810.2
sigma-E factor negative regulatory protein
COORDINATES: similar to AA sequence:RefSeq:WP_013660051.1
GO:0006352 - DNA-templated transcription initiation [Evidence IEA]; GO:0006979 - response to oxidative stress [Evidence IEA]
COORDINATES: protein motif:HMM:NF012707.2
transporter substrate-binding domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_019623274.1
GO:0008734 - L-aspartate oxidase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011395704.1
succinate dehydrogenase assembly factor 2
COORDINATES: protein motif:HMM:TIGR03317.1
COORDINATES: protein motif:HMM:TIGR00628.1
GO:0004844 - uracil DNA N-glycosylase activity [Evidence IEA]
1-acyl-sn-glycerol-3-phosphate acyltransferase
COORDINATES: protein motif:HMM:NF033682.1
COORDINATES: protein motif:HMM:TIGR01843.1
GO:0030253 - protein secretion by the type I secretion system [Evidence IEA]
HlyD family type I secretion periplasmic adaptor subunit
LapD/MoxY N-terminal periplasmic domain-containing protein
COORDINATES: protein motif:HMM:NF017815.2
transglutaminase-like cysteine peptidase
COORDINATES: protein motif:HMM:NF013188.2
GO:0006812 - monoatomic cation transport [Evidence IEA]; GO:0055085 - transmembrane transport [Evidence IEA]
COORDINATES: protein motif:HMM:NF024319.2
COORDINATES: similar to AA sequence:RefSeq:WP_009833785.1
COORDINATES: protein motif:HMM:NF012402.2
COORDINATES: protein motif:HMM:NF013411.2
COORDINATES: protein motif:HMM:NF016817.2
succinylglutamate desuccinylase/aspartoacylase family protein
COORDINATES: protein motif:HMM:NF027890.2
COORDINATES: similar to AA sequence:RefSeq:WP_020582990.1
GO:0004824 - lysine-tRNA ligase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013660178.1
GO:0003747 - translation release factor activity [Evidence IEA]
GO:0006415 - translational termination [Evidence IEA]
COORDINATES: protein motif:HMM:NF024698.2
COORDINATES: protein motif:HMM:NF013080.2
GO:0008484 - sulfuric ester hydrolase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011214128.1
COORDINATES: similar to AA sequence:RefSeq:WP_016913791.1
GO:0004151 - dihydroorotase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_020680439.1
COORDINATES: protein motif:HMM:NF015729.2
COORDINATES: protein motif:HMM:NF012383.2
phosphoribosyltransferase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_008957540.1
NADP-dependent; catalyzes the oxidative decarboxylation of malate to form pyruvate; decarboxylates oxaloacetate; incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: protein motif:HMM:NF013665.2
COORDINATES: similar to AA sequence:RefSeq:WP_016853763.1
COORDINATES: protein motif:HMM:NF023462.2
COORDINATES: similar to AA sequence:RefSeq:WP_010325362.1
COORDINATES: similar to AA sequence:RefSeq:WP_020682538.1
COORDINATES: protein motif:HMM:NF013528.2
COORDINATES: similar to AA sequence:RefSeq:WP_013795141.1
GO:0004795 - threonine synthase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013795140.1
COORDINATES: similar to AA sequence:RefSeq:WP_007151620.1
COORDINATES: protein motif:HMM:NF024498.2
thioredoxin fold domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_008927613.1
GO:0009009 - site-specific recombinase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_015478452.1
COORDINATES: similar to AA sequence:RefSeq:WP_020682903.1
GO:0009019 - tRNA (guanine-N1-)-methyltransferase activity [Evidence IEA]
tRNA (guanosine(37)-N1)-methyltransferase TrmD
COORDINATES: protein motif:HMM:TIGR02273.1
Essential for efficient processing of 16S rRNA; Essential for efficient processing of 16S rRNA; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_012071436.1
COORDINATES: similar to AA sequence:RefSeq:WP_012071437.1
GO:0048501 - signal recognition particle, plasma membrane targeting [Evidence IEA]
GO:0003924 - GTPase activity [Evidence IEA]; GO:0005048 - signal sequence binding [Evidence IEA]
COORDINATES: protein motif:HMM:NF013725.2
COORDINATES: similar to AA sequence:RefSeq:WP_016856352.1
COORDINATES: protein motif:HMM:NF016764.2
COORDINATES: protein motif:HMM:NF022777.2
COORDINATES: similar to AA sequence:RefSeq:WP_016856061.1
COORDINATES: similar to AA sequence:RefSeq:WP_019811534.1
GO:0006402 - mRNA catabolic process [Evidence IEA]; GO:0006109 - regulation of carbohydrate metabolic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF016256.2
COORDINATES: similar to AA sequence:RefSeq:WP_012068729.1
GO:0003924 - GTPase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF037773.2
COORDINATES: protein motif:HMM:NF019604.2
COORDINATES: protein motif:HMM:NF015799.2
COORDINATES: protein motif:HMM:NF012799.2
COORDINATES: similar to AA sequence:RefSeq:WP_015485319.1
COORDINATES: similar to AA sequence:RefSeq:WP_004574008.1
COORDINATES: similar to AA sequence:RefSeq:WP_010628198.1
sodium-dependent bicarbonate transport family permease
COORDINATES: protein motif:HMM:NF018827.2
COORDINATES: similar to AA sequence:RefSeq:WP_019622272.1
polyhydroxyalkanoate synthesis repressor PhaR
COORDINATES: protein motif:HMM:NF020918.2
COORDINATES: similar to AA sequence:RefSeq:WP_011508221.1
COORDINATES: similar to AA sequence:RefSeq:WP_013332009.1
GO:0008124 - 4-alpha-hydroxytetrahydrobiopterin dehydratase activity [Evidence IEA]
GO:0006729 - tetrahydrobiopterin biosynthetic process [Evidence IEA]
4a-hydroxytetrahydrobiopterin dehydratase
COORDINATES: protein motif:HMM:NF023123.2
COORDINATES: similar to AA sequence:RefSeq:WP_015485794.1
GO:0016829 - lyase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF015316.2
COORDINATES: similar to AA sequence:RefSeq:WP_013659495.1
GO:0008693 - 3-hydroxydecanoyl-[acyl-carrier-protein] dehydratase activity [Evidence IEA]
bifunctional 3-hydroxydecanoyl-ACP dehydratase/trans-2-decenoyl-ACP isomerase
COORDINATES: similar to AA sequence:RefSeq:WP_016856388.1
COORDINATES: similar to AA sequence:RefSeq:WP_010323154.1
GO:0004518 - nuclease activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_007021208.1
GO:0003697 - single-stranded DNA binding [Evidence IEA]
GO:0006310 - DNA recombination [Evidence IEA]; GO:0006281 - DNA repair [Evidence IEA]; GO:0006260 - DNA replication [Evidence IEA]; GO:0006351 - DNA-templated transcription [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_007018266.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0016887 - ATP hydrolysis activity [Evidence IEA]; GO:0003677 - DNA binding [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR03865.1
PQQ-dependent catabolism-associated CXXCW motif protein
COORDINATES: similar to AA sequence:RefSeq:WP_007020363.1
GO:0030145 - manganese ion binding [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR04484.1
GO:0009055 - electron transfer activity [Evidence IEA]; GO:0020037 - heme binding [Evidence IEA]; GO:0016669 - oxidoreductase activity, acting on a sulfur group of donors, cytochrome as acceptor [Evidence IEA]
GO:0019417 - sulfur oxidation [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR04490.1
thiosulfate oxidation carrier complex protein SoxZ
COORDINATES: similar to AA sequence:RefSeq:WP_019621321.1
thiosulfate oxidation carrier protein SoxY
COORDINATES: similar to AA sequence:RefSeq:WP_019621320.1
COORDINATES: similar to AA sequence:RefSeq:WP_019621319.1
COORDINATES: similar to AA sequence:RefSeq:WP_019621318.1
GO:0030151 - molybdenum ion binding [Evidence IEA]; GO:0016491 - oxidoreductase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_010340456.1
GO:0022625 - cytosolic large ribosomal subunit [Evidence IEA]; GO:0005762 - mitochondrial large ribosomal subunit [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_017901544.1
GO:0003677 - DNA binding [Evidence IEA]; GO:0003899 - DNA-directed 5'-3' RNA polymerase activity [Evidence IEA]; GO:0046983 - protein dimerization activity [Evidence IEA]
DNA-directed RNA polymerase subunit alpha
COORDINATES: similar to AA sequence:RefSeq:WP_004410410.1
GO:0015935 - small ribosomal subunit [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_001029758.1
COORDINATES: similar to AA sequence:RefSeq:WP_019935869.1
GO:0022627 - cytosolic small ribosomal subunit [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_006232360.1
COORDINATES: similar to AA sequence:RefSeq:WP_019814565.1
COORDINATES: similar to AA sequence:RefSeq:WP_011505748.1
COORDINATES: similar to AA sequence:RefSeq:WP_007149547.1
COORDINATES: similar to AA sequence:RefSeq:WP_019020526.1
GO:0022627 - cytosolic small ribosomal subunit [Evidence IEA]; GO:0000312 - plastid small ribosomal subunit [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_020582400.1
COORDINATES: similar to AA sequence:RefSeq:WP_003031129.1
GO:0022625 - cytosolic large ribosomal subunit [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_002555475.1
COORDINATES: similar to AA sequence:RefSeq:WP_012071923.1
COORDINATES: similar to AA sequence:RefSeq:WP_005625881.1
COORDINATES: similar to AA sequence:RefSeq:WP_012071925.1
COORDINATES: similar to AA sequence:RefSeq:WP_007394238.1
COORDINATES: similar to AA sequence:RefSeq:WP_011399911.1
COORDINATES: similar to AA sequence:RefSeq:WP_004929762.1
COORDINATES: similar to AA sequence:RefSeq:WP_003448731.1
COORDINATES: similar to AA sequence:RefSeq:WP_008044347.1
COORDINATES: similar to AA sequence:RefSeq:WP_020582411.1
COORDINATES: similar to AA sequence:RefSeq:WP_011148791.1
COORDINATES: similar to AA sequence:RefSeq:WP_002213425.1
COORDINATES: similar to AA sequence:RefSeq:WP_020288451.1
COORDINATES: similar to AA sequence:RefSeq:WP_009723903.1
COORDINATES: similar to AA sequence:RefSeq:WP_013659448.1
COORDINATES: similar to AA sequence:RefSeq:WP_014268624.1
COORDINATES: similar to AA sequence:RefSeq:WP_011911974.1
COORDINATES: similar to AA sequence:RefSeq:WP_020581764.1
COORDINATES: similar to AA sequence:RefSeq:YP_004994398.1
COORDINATES: similar to AA sequence:RefSeq:WP_003093744.1
COORDINATES: similar to AA sequence:RefSeq:WP_020581773.1
DNA-directed RNA polymerase subunit beta'
COORDINATES: similar to AA sequence:RefSeq:WP_010325527.1
DNA-directed RNA polymerase subunit beta
COORDINATES: similar to AA sequence:RefSeq:WP_009723909.1
COORDINATES: similar to AA sequence:RefSeq:WP_007148782.1
GO:0015934 - large ribosomal subunit [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_007112016.1
COORDINATES: similar to AA sequence:RefSeq:WP_008374187.1
COORDINATES: similar to AA sequence:RefSeq:WP_010325532.1
transcription termination/antitermination protein NusG
COORDINATES: similar to AA sequence:RefSeq:WP_019623351.1
COORDINATES: protein motif:HMM:TIGR00671.1
GO:0004594 - pantothenate kinase activity [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00121.1
GO:0004077 - biotin-[acetyl-CoA-carboxylase] ligase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_015487220.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0016887 - ATP hydrolysis activity [Evidence IEA]; GO:0051082 - unfolded protein binding [Evidence IEA]
COORDINATES: protein motif:HMM:NF024092.2
COORDINATES: similar to AA sequence:RefSeq:WP_010629503.1
CoA-acylating methylmalonate-semialdehyde dehydrogenase
COORDINATES: similar to AA sequence:RefSeq:WP_013332997.1
GO:0050660 - flavin adenine dinucleotide binding [Evidence IEA]; GO:0016614 - oxidoreductase activity, acting on CH-OH group of donors [Evidence IEA]
GMC family oxidoreductase N-terminal domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_013661500.1
GO:0008410 - CoA-transferase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_010629504.1
COORDINATES: nucleotide motif:Rfam:14.4:RF00001
COORDINATES: nucleotide motif:Rfam:14.4:RF02541
COORDINATES: nucleotide motif:Rfam:14.4:RF00177
COORDINATES: protein motif:HMM:NF013918.2
protein-methionine-sulfoxide reductase heme-binding subunit MsrQ
COORDINATES: similar to AA sequence:RefSeq:WP_020410243.1
GO:0043546 - molybdopterin cofactor binding [Evidence IEA]; GO:0016667 - oxidoreductase activity, acting on a sulfur group of donors [Evidence IEA]
GO:0030091 - protein repair [Evidence IEA]
protein-methionine-sulfoxide reductase catalytic subunit MsrP
COORDINATES: similar to AA sequence:RefSeq:WP_007018797.1
GO:0003882 - CDP-diacylglycerol-serine O-phosphatidyltransferase activity [Evidence IEA]
CDP-diacylglycerol--serine O-phosphatidyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_011399623.1
COORDINATES: similar to AA sequence:RefSeq:WP_005757070.1
GO:1990610 - acetolactate synthase regulator activity [Evidence IEA]
GO:0009082 - branched-chain amino acid biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014996019.1
GO:0003984 - acetolactate synthase activity [Evidence IEA]; GO:0050660 - flavin adenine dinucleotide binding [Evidence IEA]; GO:0000287 - magnesium ion binding [Evidence IEA]; GO:0030976 - thiamine pyrophosphate binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014996022.1
COORDINATES: protein motif:HMM:NF014619.2
COORDINATES: protein motif:HMM:NF008385.0
23S rRNA pseudouridine(1911/1915/1917) synthase RluD
COORDINATES: protein motif:HMM:TIGR03302.1
outer membrane protein assembly factor BamD
COORDINATES: similar to AA sequence:RefSeq:WP_009725033.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0003952 - NAD+ synthase (glutamine-hydrolyzing) activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF023444.2
GO:0015627 - type II protein secretion system complex [Evidence IEA]
COORDINATES: protein motif:HMM:NF028042.2
COORDINATES: protein motif:HMM:NF017388.2
COORDINATES: protein motif:HMM:NF025061.2
PilX N-terminal domain-containing pilus assembly protein
COORDINATES: protein motif:HMM:NF027400.2
GO:0043683 - type IV pilus assembly [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR02523.1
COORDINATES: similar to AA sequence:RefSeq:WP_010626527.1
GO:0051745 - 4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase activity [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]
GO:0050992 - dimethylallyl diphosphate biosynthetic process [Evidence IEA]; GO:0019288 - isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway [Evidence IEA]
4-hydroxy-3-methylbut-2-enyl diphosphate reductase
COORDINATES: similar to AA sequence:RefSeq:WP_003094726.1
COORDINATES: similar to AA sequence:RefSeq:WP_008959239.1
GO:0009306 - protein secretion [Evidence IEA]; GO:0006508 - proteolysis [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_008928917.1
GO:0004822 - isoleucine-tRNA ligase activity [Evidence IEA]
GO:0006428 - isoleucyl-tRNA aminoacylation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_008739928.1
GO:0003919 - FMN adenylyltransferase activity [Evidence IEA]
bifunctional riboflavin kinase/FAD synthetase
COORDINATES: similar to AA sequence:RefSeq:WP_017431362.1
GO:0034204 - lipid translocation [Evidence IEA]; GO:0009252 - peptidoglycan biosynthetic process [Evidence IEA]
murein biosynthesis integral membrane protein MurJ
COORDINATES: similar to AA sequence:RefSeq:WP_011399647.1
COORDINATES: similar to AA sequence:RefSeq:WP_019952331.1
GO:0004349 - glutamate 5-kinase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_010321681.1
COORDINATES: similar to AA sequence:RefSeq:NP_253257.1
COORDINATES: similar to AA sequence:RefSeq:WP_000271409.1
COORDINATES: similar to AA sequence:RefSeq:WP_013331064.1
GO:0008299 - isoprenoid biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_007022319.1
GO:0033744 - L-methionine:thioredoxin-disulfide S-oxidoreductase activity [Evidence IEA]; GO:0008113 - peptide-methionine (S)-S-oxide reductase activity [Evidence IEA]
peptide-methionine (S)-S-oxide reductase MsrA
COORDINATES: protein motif:HMM:NF022072.2
GO:0006629 - lipid metabolic process [Evidence IEA]
patatin-like phospholipase family protein
COORDINATES: protein motif:HMM:TIGR04122.1
ligase-associated DNA damage response exonuclease
COORDINATES: protein motif:HMM:NF027482.2
COORDINATES: similar to AA sequence:RefSeq:WP_018916292.1
GO:0004514 - nicotinate-nucleotide diphosphorylase (carboxylating) activity [Evidence IEA]
GO:0019363 - pyridine nucleotide biosynthetic process [Evidence IEA]
carboxylating nicotinate-nucleotide diphosphorylase
COORDINATES: protein motif:HMM:NF012345.2
COORDINATES: protein motif:HMM:NF017864.2
COORDINATES: protein motif:HMM:NF014724.2
COORDINATES: protein motif:HMM:NF012342.2
COORDINATES: similar to AA sequence:RefSeq:WP_020409620.1
COORDINATES: similar to AA sequence:RefSeq:WP_008047449.1
GO:0009297 - pilus assembly [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_019018208.1
type II secretion system F family protein
COORDINATES: similar to AA sequence:RefSeq:WP_020409623.1
COORDINATES: protein motif:HMM:TIGR00152.1
GO:0004140 - dephospho-CoA kinase activity [Evidence IEA]
Dephospho-CoA kinase (CoaE) performs the final step in coenzyme A biosynthesis; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_011507475.1
COORDINATES: similar to AA sequence:RefSeq:WP_009833147.1
GO:0016818 - hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_019018203.1
GO:0004358 - glutamate N-acetyltransferase activity [Evidence IEA]
bifunctional glutamate N-acetyltransferase/amino-acid acetyltransferase ArgJ
COORDINATES: similar to AA sequence:RefSeq:WP_011399582.1
GO:0006886 - intracellular protein transport [Evidence IEA]; GO:0017038 - protein import [Evidence IEA]; GO:0006605 - protein targeting [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011399585.1
GO:0008759 - UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase activity [Evidence IEA]
UDP-3-O-acyl-N-acetylglucosamine deacetylase
COORDINATES: similar to AA sequence:RefSeq:WP_008739547.1
COORDINATES: protein motif:HMM:TIGR01174.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0005515 - protein binding [Evidence IEA]
GO:0043093 - FtsZ-dependent cytokinesis [Evidence IEA]
COORDINATES: protein motif:HMM:NF015739.2
FtsQ-type POTRA domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_010321709.1
COORDINATES: similar to AA sequence:RefSeq:WP_008929117.1
GO:0008763 - UDP-N-acetylmuramate-L-alanine ligase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014995816.1
GO:0050511 - undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase activity [Evidence IEA]
undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase
COORDINATES: protein motif:HMM:TIGR02614.1
GO:0051301 - cell division [Evidence IEA]; GO:0009252 - peptidoglycan biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR01087.1
GO:0008764 - UDP-N-acetylmuramoylalanine-D-glutamate ligase activity [Evidence IEA]
UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase
COORDINATES: similar to AA sequence:RefSeq:WP_009722010.1
GO:0008963 - phospho-N-acetylmuramoyl-pentapeptide-transferase activity [Evidence IEA]
phospho-N-acetylmuramoyl-pentapeptide- transferase
COORDINATES: protein motif:HMM:TIGR01143.1
UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D- alanine ligase
COORDINATES: protein motif:HMM:NF001126.0
GO:0005524 - ATP binding [Evidence IEA]; GO:0016874 - ligase activity [Evidence IEA]
GO:0009058 - biosynthetic process [Evidence IEA]; GO:0051301 - cell division [Evidence IEA]; GO:0008360 - regulation of cell shape [Evidence IEA]
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2, 6-diaminopimelate ligase
COORDINATES: protein motif:HMM:TIGR02209.1
COORDINATES: similar to AA sequence:RefSeq:WP_015485969.1
GO:0016434 - rRNA (cytosine) methyltransferase activity [Evidence IEA]
16S rRNA (cytosine(1402)-N(4))-methyltransferase RsmH
COORDINATES: similar to AA sequence:RefSeq:WP_019621915.1
GO:0043565 - sequence-specific DNA binding [Evidence IEA]
GO:0051302 - regulation of cell division [Evidence IEA]
division/cell wall cluster transcriptional repressor MraZ
COORDINATES: nucleotide motif:Rfam:14.4:RF00010
COORDINATES: protein motif:HMM:TIGR00096.1
GO:0008649 - rRNA methyltransferase activity [Evidence IEA]; GO:0008757 - S-adenosylmethionine-dependent methyltransferase activity [Evidence IEA]
GO:0000451 - rRNA 2'-O-methylation [Evidence IEA]
16S rRNA (cytidine(1402)-2'-O)-methyltransferase
COORDINATES: protein motif:HMM:NF016251.2
COORDINATES: protein motif:HMM:NF014119.2
COORDINATES: protein motif:HMM:NF024969.2
GO:0097367 - carbohydrate derivative binding [Evidence IEA]
GO:1901135 - carbohydrate derivative metabolic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF016836.2
COORDINATES: similar to AA sequence:RefSeq:WP_020287894.1
ClpXP protease specificity-enhancing factor
COORDINATES: similar to AA sequence:RefSeq:WP_012070099.1
COORDINATES: similar to AA sequence:RefSeq:WP_009721997.1
COORDINATES: similar to AA sequence:RefSeq:WP_007114709.1
cytochrome bc complex cytochrome b subunit
COORDINATES: similar to AA sequence:RefSeq:WP_019811833.1
GO:0045275 - respiratory chain complex III [Evidence IEA]
GO:0009055 - electron transfer activity [Evidence IEA]; GO:0008121 - ubiquinol-cytochrome-c reductase activity [Evidence IEA]
GO:0009060 - aerobic respiration [Evidence IEA]
ubiquinol-cytochrome c reductase iron-sulfur subunit
COORDINATES: similar to AA sequence:RefSeq:WP_000829824.1
COORDINATES: similar to AA sequence:RefSeq:WP_010847760.1
COORDINATES: similar to AA sequence:RefSeq:WP_014995884.1
GO:0051301 - cell division [Evidence IEA]
COORDINATES: protein motif:HMM:NF018049.2
COORDINATES: similar to AA sequence:RefSeq:WP_007022353.1
GO:0051540 - metal cluster binding [Evidence IEA]
Nif3-like dinuclear metal center hexameric protein
COORDINATES: similar to AA sequence:RefSeq:WP_014995890.1
trypsin-like peptidase domain-containing protein
COORDINATES: protein motif:HMM:TIGR01141.1
GO:0004400 - histidinol-phosphate transaminase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_009833462.1
COORDINATES: similar to AA sequence:RefSeq:WP_020683116.1
GO:0003879 - ATP phosphoribosyltransferase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011587846.1
GO:0008760 - UDP-N-acetylglucosamine 1-carboxyvinyltransferase activity [Evidence IEA]
UDP-N-acetylglucosamine 1-carboxyvinyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_004646023.1
BolA/IbaG family iron-sulfur metabolism protein
COORDINATES: similar to AA sequence:RefSeq:WP_009833468.1
GO:0015914 - phospholipid transport [Evidence IEA]
outer membrane lipid asymmetry maintenance protein MlaD
COORDINATES: similar to AA sequence:RefSeq:WP_010322858.1
lipid asymmetry maintenance ABC transporter permease subunit MlaE
COORDINATES: similar to AA sequence:RefSeq:WP_019952239.1
COORDINATES: similar to AA sequence:RefSeq:WP_008738288.1
GO:0098662 - inorganic cation transmembrane transport [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_008929217.1
GO:0016853 - isomerase activity [Evidence IEA]
KpsF/GutQ family sugar-phosphate isomerase
COORDINATES: similar to AA sequence:RefSeq:WP_009721978.1
COORDINATES: protein motif:HMM:TIGR04409.1
LPS export ABC transporter periplasmic protein LptC
COORDINATES: protein motif:HMM:TIGR03002.1
GO:0043190 - ATP-binding cassette (ABC) transporter complex [Evidence IEA]; GO:0030288 - outer membrane-bounded periplasmic space [Evidence IEA]
GO:0001530 - lipopolysaccharide binding [Evidence IEA]
lipopolysaccharide transport periplasmic protein LptA
COORDINATES: similar to AA sequence:RefSeq:WP_019018155.1
GO:0042626 - ATPase-coupled transmembrane transporter activity [Evidence IEA]; GO:0015221 - lipopolysaccharide transmembrane transporter activity [Evidence IEA]
LPS export ABC transporter ATP-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_008170156.1
GO:0003677 - DNA binding [Evidence IEA]; GO:0001216 - DNA-binding transcription activator activity [Evidence IEA]; GO:0016987 - sigma factor activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011399058.1
GO:0022626 - cytosolic ribosome [Evidence IEA]; GO:0005840 - ribosome [Evidence IEA]
GO:0045182 - translation regulator activity [Evidence IEA]
GO:0009386 - translational attenuation [Evidence IEA]
ribosome-associated translation inhibitor RaiA
COORDINATES: protein motif:HMM:NF012579.2
COORDINATES: similar to AA sequence:RefSeq:WP_008738298.1
COORDINATES: protein motif:HMM:NF012599.2
COORDINATES: similar to AA sequence:RefSeq:WP_011507528.1
GO:0015095 - magnesium ion transmembrane transporter activity [Evidence IEA]
GO:0015693 - magnesium ion transport [Evidence IEA]
COORDINATES: protein motif:HMM:NF039907.1
COORDINATES: protein motif:HMM:NF016626.2
COORDINATES: protein motif:HMM:NF008006.0
GO:0008237 - metallopeptidase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF024893.2
AsmA-like C-terminal region-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_016913471.1
GO:0004540 - ribonuclease activity [Evidence IEA]; GO:0003723 - RNA binding [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00172.1
COORDINATES: protein motif:HMM:TIGR03426.1
GO:0008360 - regulation of cell shape [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00219.1
COORDINATES: similar to AA sequence:RefSeq:WP_019408857.1
COORDINATES: similar to AA sequence:RefSeq:WP_009833487.1
GO:0030956 - glutamyl-tRNA(Gln) amidotransferase complex [Evidence IEA]
GO:0050567 - glutaminyl-tRNA synthase (glutamine-hydrolyzing) activity [Evidence IEA]
Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatC
COORDINATES: similar to AA sequence:RefSeq:WP_019951873.1
Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatA
COORDINATES: similar to AA sequence:RefSeq:WP_012069637.1
GO:0016884 - carbon-nitrogen ligase activity, with glutamine as amido-N-donor [Evidence IEA]
Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatB
COORDINATES: protein motif:HMM:NF013094.2
COORDINATES: protein motif:HMM:TIGR00536.1
COORDINATES: similar to AA sequence:RefSeq:WP_008929186.1
COORDINATES: protein motif:HMM:TIGR01035.1
GO:0008883 - glutamyl-tRNA reductase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF015512.2
GO:0015031 - protein transport [Evidence IEA]
lipoprotein insertase outer membrane protein LolB
COORDINATES: protein motif:HMM:TIGR00154.1
GO:0050515 - 4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase activity [Evidence IEA]
GO:0016114 - terpenoid biosynthetic process [Evidence IEA]
4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase
COORDINATES: similar to AA sequence:RefSeq:WP_017217706.1
COORDINATES: similar to AA sequence:RefSeq:WP_020286438.1
COORDINATES: similar to AA sequence:RefSeq:WP_008929180.1
GO:0008097 - 5S rRNA binding [Evidence IEA]; GO:0003735 - structural constituent of ribosome [Evidence IEA]
50S ribosomal protein L25/general stress protein Ctc
COORDINATES: similar to AA sequence:RefSeq:WP_009287567.1
GO:0004045 - aminoacyl-tRNA hydrolase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_016914435.1
COORDINATES: protein motif:HMM:NF013487.2
COORDINATES: protein motif:HMM:NF013460.2
cytochrome b/b6 domain-containing protein
GO:0016209 - antioxidant activity [Evidence IEA]; GO:0016491 - oxidoreductase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_020681418.1
COORDINATES: similar to AA sequence:RefSeq:WP_020286971.1
COORDINATES: similar to AA sequence:RefSeq:WP_020681416.1
COORDINATES: similar to AA sequence:RefSeq:WP_013797918.1
COORDINATES: protein motif:HMM:NF013980.2
SprT family zinc-dependent metalloprotease
COORDINATES: similar to AA sequence:RefSeq:WP_008041489.1
GO:0004325 - ferrochelatase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_010323386.1
GO:0004177 - aminopeptidase activity [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00225.1
COORDINATES: protein motif:HMM:NF025589.2
COORDINATES: similar to AA sequence:RefSeq:WP_020682856.1
COORDINATES: similar to AA sequence:RefSeq:WP_011399084.1
GO:0051539 - 4 iron, 4 sulfur cluster binding [Evidence IEA]; GO:1904047 - S-adenosyl-L-methionine binding [Evidence IEA]; GO:0016782 - transferase activity, transferring sulphur-containing groups [Evidence IEA]
tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB
COORDINATES: similar to AA sequence:RefSeq:WP_008042437.1
COORDINATES: similar to AA sequence:RefSeq:WP_020409692.1
GO:0046872 - metal ion binding [Evidence IEA]; GO:0004540 - ribonuclease activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_008734177.1
transporter associated domain-containing protein
COORDINATES: protein motif:HMM:TIGR00546.1
GO:0042158 - lipoprotein biosynthetic process [Evidence IEA]; GO:0006497 - protein lipidation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011507639.1
GO:0004823 - leucine-tRNA ligase activity [Evidence IEA]
GO:0006429 - leucyl-tRNA aminoacylation [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR01128.1
COORDINATES: protein motif:HMM:NF024895.2
COORDINATES: similar to AA sequence:RefSeq:WP_010323600.1
GO:0033819 - lipoyl(octanoyl) transferase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011506849.1
COORDINATES: similar to AA sequence:RefSeq:WP_018917306.1
D-alanyl-D-alanine carboxypeptidase family protein
COORDINATES: protein motif:HMM:TIGR00413.1
septal ring lytic transglycosylase RlpA family protein
COORDINATES: protein motif:HMM:NF024798.2
GO:0016757 - glycosyltransferase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_020288174.1
COORDINATES: similar to AA sequence:RefSeq:WP_007022001.1
COORDINATES: protein motif:HMM:NF000986.0
23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH
COORDINATES: similar to AA sequence:RefSeq:WP_007018860.1
GO:0043022 - ribosome binding [Evidence IEA]
GO:0017148 - negative regulation of translation [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00482.1
GO:0000309 - nicotinamide-nucleotide adenylyltransferase activity [Evidence IEA]; GO:0004515 - nicotinate-nucleotide adenylyltransferase activity [Evidence IEA]
nicotinate (nicotinamide) nucleotide adenylyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_012070540.1
GO:0004350 - glutamate-5-semialdehyde dehydrogenase activity [Evidence IEA]; GO:0016620 - oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor [Evidence IEA]
COORDINATES: protein motif:HMM:NF014269.2
LON peptidase substrate-binding domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_009723541.1
COORDINATES: similar to AA sequence:RefSeq:WP_009095362.1
COORDINATES: similar to AA sequence:RefSeq:WP_003444254.1
GO:0004427 - inorganic diphosphate phosphatase activity [Evidence IEA]
GO:0006796 - phosphate-containing compound metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_007103505.1
COORDINATES: similar to AA sequence:RefSeq:WP_020581825.1
protein-disulfide reductase DsbD N-terminal domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_019623221.1
GO:0003855 - 3-dehydroquinate dehydratase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_020580586.1
acetyl-CoA carboxylase biotin carboxyl carrier protein
COORDINATES: similar to AA sequence:RefSeq:WP_018916018.1
GO:0003989 - acetyl-CoA carboxylase activity [Evidence IEA]; GO:0004075 - biotin carboxylase activity [Evidence IEA]
acetyl-CoA carboxylase biotin carboxylase subunit
COORDINATES: protein motif:HMM:NF018076.2
50S ribosomal protein L11 methyltransferase
COORDINATES: protein motif:HMM:TIGR00737.1
GO:0003824 - catalytic activity [Evidence IEA]; GO:0050660 - flavin adenine dinucleotide binding [Evidence IEA]; GO:0016491 - oxidoreductase activity [Evidence IEA]; GO:0017150 - tRNA dihydrouridine synthase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF014950.2
COORDINATES: similar to AA sequence:RefSeq:WP_007022201.1
GO:0003824 - catalytic activity [Evidence IEA]; GO:0003937 - IMP cyclohydrolase activity [Evidence IEA]; GO:0004643 - phosphoribosylaminoimidazolecarboxamide formyltransferase activity [Evidence IEA]
GO:0006189 - 'de novo' IMP biosynthetic process [Evidence IEA]; GO:0006164 - purine nucleotide biosynthetic process [Evidence IEA]
bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase
COORDINATES: similar to AA sequence:RefSeq:WP_011399720.1
GO:0004637 - phosphoribosylamine-glycine ligase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF012575.2
COORDINATES: protein motif:HMM:TIGR00230.1
GO:0000023 - maltose metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_020584285.1
GO:0019899 - enzyme binding [Evidence IEA]
COORDINATES: protein motif:HMM:NF012951.2
GO:0004812 - aminoacyl-tRNA ligase activity [Evidence IEA]; GO:0005524 - ATP binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_017431303.1
COORDINATES: similar to AA sequence:RefSeq:WP_009101431.1
GO:0004652 - polynucleotide adenylyltransferase activity [Evidence IEA]; GO:0003723 - RNA binding [Evidence IEA]
GO:0006378 - mRNA polyadenylation [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR01498.1
GO:0003848 - 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_007017897.1
GO:0003864 - 3-methyl-2-oxobutanoate hydroxymethyltransferase activity [Evidence IEA]
GO:0015940 - pantothenate biosynthetic process [Evidence IEA]
3-methyl-2-oxobutanoate hydroxymethyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_019623135.1
GO:0004592 - pantoate-beta-alanine ligase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF014069.2
COORDINATES: protein motif:HMM:NF006830.0
GO:0004417 - hydroxyethylthiazole kinase activity [Evidence IEA]
GO:0009228 - thiamine biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00693.1
GO:0004789 - thiamine-phosphate diphosphorylase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_019622537.1
GO:0008902 - hydroxymethylpyrimidine kinase activity [Evidence IEA]; GO:0008972 - phosphomethylpyrimidine kinase activity [Evidence IEA]
bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase
COORDINATES: protein motif:HMM:NF012686.2
COORDINATES: similar to AA sequence:RefSeq:WP_010625669.1
GO:0004831 - tyrosine-tRNA ligase activity [Evidence IEA]
GO:0006437 - tyrosyl-tRNA aminoacylation [Evidence IEA]
COORDINATES: protein motif:HMM:NF039309.1
COORDINATES: protein motif:HMM:NF015647.2
COORDINATES: similar to AA sequence:RefSeq:WP_011399945.1
iron-sulfur cluster insertion protein ErpA
COORDINATES: similar to AA sequence:RefSeq:WP_019472953.1
GO:0003942 - N-acetyl-gamma-glutamyl-phosphate reductase activity [Evidence IEA]
N-acetyl-gamma-glutamyl-phosphate reductase
COORDINATES: protein motif:HMM:NF012861.2
COORDINATES: similar to AA sequence:RefSeq:WP_008041520.1
COORDINATES: similar to AA sequence:RefSeq:WP_012069042.1
GO:0042286 - glutamate-1-semialdehyde 2,1-aminomutase activity [Evidence IEA]
glutamate-1-semialdehyde 2,1-aminomutase
COORDINATES: protein motif:HMM:NF013775.2
bifunctional aminoglycoside phosphotransferase/ATP-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_012070674.1
GO:0004497 - monooxygenase activity [Evidence IEA]
2-polyprenyl-3-methyl-6-methoxy-1,4-benzoquinone monooxygenase
COORDINATES: similar to AA sequence:RefSeq:WP_019952596.1
COORDINATES: similar to AA sequence:RefSeq:WP_013346905.1
cAMP-activated global transcriptional regulator CRP
COORDINATES: protein motif:HMM:NF015818.2
COORDINATES: protein motif:HMM:NF019032.2
COORDINATES: protein motif:HMM:NF022140.2
COORDINATES: similar to AA sequence:RefSeq:WP_019018610.1
GO:0004425 - indole-3-glycerol-phosphate synthase activity [Evidence IEA]
GO:0006568 - tryptophan metabolic process [Evidence IEA]
indole-3-glycerol phosphate synthase TrpC
COORDINATES: similar to AA sequence:RefSeq:WP_013660208.1
GO:0004048 - anthranilate phosphoribosyltransferase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_007020966.1
aminodeoxychorismate/anthranilate synthase component II
COORDINATES: protein motif:HMM:NF012730.2
COORDINATES: similar to AA sequence:RefSeq:WP_015485824.1
GO:0004049 - anthranilate synthase activity [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR01449.2
GO:0008967 - phosphoglycolate phosphatase activity [Evidence IEA]
GO:0043094 - cellular metabolic compound salvage [Evidence IEA]; GO:0008152 - metabolic process [Evidence IEA]; GO:0009853 - photorespiration [Evidence IEA]
PGP is an essential enzyme in the glycolate salvage pathway in higher organisms (photorespiration in plants). Phosphoglycolate results from the oxidase activity of RubisCO in the Calvin cycle when concentrations of carbon dioxide are low relative to oxygen. This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolase enzymes (PF00702); Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_019813711.1
GO:0004750 - D-ribulose-phosphate 3-epimerase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF012451.2
COORDINATES: protein motif:HMM:NF016348.2
GO:0061024 - membrane organization [Evidence IEA]; GO:0010033 - response to organic substance [Evidence IEA]
COORDINATES: protein motif:HMM:NF020872.2
GO:0003755 - peptidyl-prolyl cis-trans isomerase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_010629620.1
GO:0000179 - rRNA (adenine-N6,N6-)-dimethyltransferase activity [Evidence IEA]
16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))- dimethyltransferase RsmA
COORDINATES: similar to AA sequence:RefSeq:WP_008928672.1
COORDINATES: protein motif:HMM:NF001204.0
GO:0008803 - bis(5'-nucleosyl)-tetraphosphatase (symmetrical) activity [Evidence IEA]
symmetrical bis(5'-nucleosyl)-tetraphosphatase
COORDINATES: similar to AA sequence:RefSeq:WP_020681699.1
GO:0004792 - thiosulfate sulfurtransferase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF013871.2
COORDINATES: protein motif:HMM:TIGR00525.1
GO:0004150 - dihydroneopterin aldolase activity [Evidence IEA]
GO:0006760 - folic acid-containing compound metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_009721433.1
tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD
COORDINATES: similar to AA sequence:RefSeq:WP_011235429.1
COORDINATES: similar to AA sequence:RefSeq:WP_014993328.1
COORDINATES: protein motif:HMM:TIGR01391.1
GO:0003896 - DNA primase activity [Evidence IEA]
GO:0006269 - DNA replication, synthesis of RNA primer [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_010322916.1
GO:0003700 - DNA-binding transcription factor activity [Evidence IEA]; GO:0016987 - sigma factor activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF013736.2
COORDINATES: protein motif:HMM:NF020893.2
COORDINATES: protein motif:HMM:NF014417.2
transcription termination/antitermination NusG family protein
COORDINATES: similar to AA sequence:RefSeq:WP_011397505.1
heme NO-binding domain-containing protein
COORDINATES: protein motif:HMM:NF041384.1
COORDINATES: protein motif:HMM:NF018717.2
COORDINATES: protein motif:HMM:NF014502.2
COORDINATES: protein motif:HMM:TIGR00209.1
GO:0008108 - UDP-glucose:hexose-1-phosphate uridylyltransferase activity [Evidence IEA]
galactose-1-phosphate uridylyltransferase
COORDINATES: protein motif:HMM:TIGR00131.1
GO:0004335 - galactokinase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF014156.2
COORDINATES: similar to AA sequence:RefSeq:WP_009834249.1
COORDINATES: similar to AA sequence:RefSeq:WP_009834250.1
COORDINATES: similar to AA sequence:RefSeq:WP_020287604.1
COORDINATES: protein motif:HMM:NF024242.2
GO:0003700 - DNA-binding transcription factor activity [Evidence IEA]; GO:0043565 - sequence-specific DNA binding [Evidence IEA]
COORDINATES: protein motif:HMM:NF006679.0
GO:0008892 - guanine deaminase activity [Evidence IEA]
GO:0006147 - guanine catabolic process [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR02964.1
GO:0043546 - molybdopterin cofactor binding [Evidence IEA]
GO:0065003 - protein-containing complex assembly [Evidence IEA]; GO:0009115 - xanthine catabolic process [Evidence IEA]
xanthine dehydrogenase accessory protein XdhC
COORDINATES: protein motif:HMM:TIGR02965.1
GO:0043546 - molybdopterin cofactor binding [Evidence IEA]; GO:0004854 - xanthine dehydrogenase activity [Evidence IEA]
GO:0009115 - xanthine catabolic process [Evidence IEA]
xanthine dehydrogenase molybdopterin binding subunit
COORDINATES: protein motif:HMM:TIGR02963.1
GO:0004854 - xanthine dehydrogenase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013660912.1
BMP family ABC transporter substrate-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_020679291.1
COORDINATES: similar to AA sequence:RefSeq:WP_020679292.1
COORDINATES: protein motif:HMM:NF006055.0
COORDINATES: similar to AA sequence:RefSeq:WP_019019425.1
COORDINATES: protein motif:HMM:TIGR01244.1
COORDINATES: similar to AA sequence:RefSeq:WP_008734845.1
COORDINATES: similar to AA sequence:RefSeq:WP_014992422.1
COORDINATES: similar to AA sequence:RefSeq:WP_014993458.1
COORDINATES: similar to AA sequence:RefSeq:WP_020683049.1
GO:0008272 - sulfate transport [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_016855797.1
The N-terminal region of this protein, as described by TIGR01726, is a three transmembrane segment that identifies a subfamily of ABC transporter permease subunits, which specificities that include histidine, arginine, glutamine, glutamate, L-cystine (sic), the opines (in Agrobacterium) octopine and nopaline, etc.; The N-terminal region of this protein, as described by TIGR01726, is a three transmembrane segment that identifies a subfamily of ABC transporter permease subunits, which specificities that include histidine, arginine, glutamine, glutamate, L-cystine (sic), the opines (in Agrobacterium) octopine and nopaline, etc; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_009721946.1
YajQ family cyclic di-GMP-binding protein
COORDINATES: protein motif:HMM:NF017532.2
phytanoyl-CoA dioxygenase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_019813319.1
GO:0008783 - agmatinase activity [Evidence IEA]
GO:0008295 - spermidine biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_019018285.1
GO:0008216 - spermidine metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_008042245.1
saccharopine dehydrogenase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_020287560.1
GO:0008792 - arginine decarboxylase activity [Evidence IEA]
GO:0006527 - arginine catabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_020407951.1
COORDINATES: similar to AA sequence:RefSeq:WP_016059297.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0004797 - thymidine kinase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013659892.1
COORDINATES: similar to AA sequence:RefSeq:WP_008043766.1
COORDINATES: similar to AA sequence:RefSeq:WP_013659890.1
COORDINATES: similar to AA sequence:RefSeq:WP_007018339.1
GO:0045861 - negative regulation of proteolysis [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_020683732.1
COORDINATES: similar to AA sequence:RefSeq:WP_008042329.1
COORDINATES: similar to AA sequence:RefSeq:WP_018915546.1
COORDINATES: similar to AA sequence:RefSeq:WP_007022969.1
COORDINATES: similar to AA sequence:RefSeq:WP_019017470.1
COORDINATES: nucleotide motif:Rfam:14.4:RF00504
glycine riboswitch; Derived by automated computational analysis using gene prediction method: cmsearch.
COORDINATES: similar to AA sequence:RefSeq:WP_009098910.1
COORDINATES: similar to AA sequence:RefSeq:WP_011978461.1
COORDINATES: similar to AA sequence:RefSeq:WP_011396202.1
COORDINATES: similar to AA sequence:RefSeq:WP_013659723.1
GO:0004126 - cytidine deaminase activity [Evidence IEA]
GO:0008655 - pyrimidine-containing compound salvage [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_008045149.1
COORDINATES: similar to AA sequence:RefSeq:WP_019810138.1
COORDINATES: protein motif:HMM:NF014680.2
COORDINATES: protein motif:HMM:NF019491.2
COORDINATES: similar to AA sequence:RefSeq:WP_013332112.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0004819 - glutamine-tRNA ligase activity [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]
GO:0006425 - glutaminyl-tRNA aminoacylation [Evidence IEA]
glutamine--tRNA ligase/YqeY domain fusion protein
COORDINATES: protein motif:HMM:TIGR00035.1
GO:0047689 - aspartate racemase activity [Evidence IEA]
GO:0006520 - amino acid metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011394625.1
COORDINATES: similar to AA sequence:RefSeq:WP_018916139.1
COORDINATES: similar to AA sequence:RefSeq:WP_009724947.1
GO:0016226 - iron-sulfur cluster assembly [Evidence IEA]; GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
SUF system Fe-S cluster assembly regulator
COORDINATES: similar to AA sequence:RefSeq:WP_018917499.1
COORDINATES: similar to AA sequence:RefSeq:WP_018917498.1
COORDINATES: protein motif:HMM:TIGR01981.1
COORDINATES: similar to AA sequence:RefSeq:WP_015487470.1
GO:0031071 - cysteine desulfurase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF013999.2
COORDINATES: protein motif:HMM:NF025178.2
non-heme iron oxygenase ferredoxin subunit
COORDINATES: protein motif:HMM:NF039469.1
COORDINATES: protein motif:HMM:NF014375.2
prepilin-type N-terminal cleavage/methylation domain-containing protein
pilus assembly PilX N-terminal domain-containing protein
COORDINATES: protein motif:HMM:NF024834.2
COORDINATES: protein motif:HMM:TIGR03821.1
GO:0072581 - protein-N6-(L-lysyl)-L-lysine modification to protein-N6-(beta-lysyl)-L-lysine [Evidence IEA]
COORDINATES: protein motif:HMM:NF015438.2
MOSC N-terminal beta barrel domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_010325353.1
COORDINATES: protein motif:HMM:NF013646.2
COORDINATES: similar to AA sequence:RefSeq:WP_008044982.1
GO:0030145 - manganese ion binding [Evidence IEA]; GO:0070006 - metalloaminopeptidase activity [Evidence IEA]
aminopeptidase P N-terminal domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_007022980.1
COORDINATES: similar to AA sequence:RefSeq:WP_020681179.1
GO:0004177 - aminopeptidase activity [Evidence IEA]
GO:0030163 - protein catabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_008044878.1
GO:0006950 - response to stress [Evidence IEA]; GO:0006412 - translation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_017429517.1
GO:0004356 - glutamate-ammonia ligase activity [Evidence IEA]
GO:0006542 - glutamine biosynthetic process [Evidence IEA]; GO:0006807 - nitrogen compound metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011505555.1
GO:0016310 - phosphorylation [Evidence IEA]; GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]; GO:0007165 - signal transduction [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014992990.1
GO:0000160 - phosphorelay signal transduction system [Evidence IEA]; GO:0006808 - regulation of nitrogen utilization [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_008047782.1
tRNA (cytidine(34)-2'-O)-methyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_020407884.1
GO:0051262 - protein tetramerization [Evidence IEA]; GO:0015031 - protein transport [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_020407883.1
COORDINATES: similar to AA sequence:RefSeq:WP_011395290.1
GO:0046537 - 2,3-bisphosphoglycerate-independent phosphoglycerate mutase activity [Evidence IEA]
2,3-bisphosphoglycerate-independent phosphoglycerate mutase
COORDINATES: similar to AA sequence:RefSeq:WP_010325044.1
COORDINATES: protein motif:HMM:NF016623.2
divergent polysaccharide deacetylase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_011978580.1
GO:0000107 - imidazoleglycerol-phosphate synthase activity [Evidence IEA]
imidazole glycerol phosphate synthase subunit HisF
COORDINATES: similar to AA sequence:RefSeq:WP_007113929.1
GO:0003949 - 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino]imidazole-4- carboxamide isomerase activity [Evidence IEA]
1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino]imidazole-4- carboxamide isomerase
COORDINATES: similar to AA sequence:RefSeq:WP_020407874.1
GO:0016884 - carbon-nitrogen ligase activity, with glutamine as amido-N-donor [Evidence IEA]; GO:0000107 - imidazoleglycerol-phosphate synthase activity [Evidence IEA]
imidazole glycerol phosphate synthase subunit HisH
COORDINATES: similar to AA sequence:RefSeq:WP_013333772.1
GO:0004424 - imidazoleglycerol-phosphate dehydratase activity [Evidence IEA]
imidazoleglycerol-phosphate dehydratase HisB
COORDINATES: similar to AA sequence:RefSeq:WP_007150513.1
GO:0006310 - DNA recombination [Evidence IEA]; GO:0006281 - DNA repair [Evidence IEA]; GO:0006260 - DNA replication [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_007149934.1
GO:0005506 - iron ion binding [Evidence IEA]
COORDINATES: protein motif:HMM:NF014910.2
FAD-binding and (Fe-S)-binding domain-containing protein
COORDINATES: protein motif:HMM:NF014732.2
COORDINATES: protein motif:HMM:NF012398.2
GO:0003842 - 1-pyrroline-5-carboxylate dehydrogenase activity [Evidence IEA]
GO:0006562 - proline catabolic process [Evidence IEA]
L-glutamate gamma-semialdehyde dehydrogenase
COORDINATES: similar to AA sequence:RefSeq:WP_020287449.1
Lrp/AsnC ligand binding domain-containing protein
COORDINATES: protein motif:HMM:NF037100.2
nucleotidyltransferase domain-containing protein