MAG: Ferrovum myxofaciens isolate S2.4 chromosome, complete genome.
Ferrovum myxofaciens (stalactite biofilm)
Bacteria; Pseudomonadota; Betaproteobacteria; Ferrovales; Ferrovaceae; Ferrovum.
Comparative genomics of Ferrovum myxofaciens strains, predominant extremophile bacteria forming large biofilm stalactites in acid mine ecosystems
Submitted (16-MAY-2020) Laboratory of Genomics and Bioinformatics, Institute of Molecular Genetics of the ASCR v.v.i., Videnska 1083, Prague 14220, Czech Republic
REFSEQ INFORMATION: The reference sequence is identical to\nCP053676.1.\nBacteria and source DNA available from Lukas Falteisek, Department\nof Ecology, Faculty of Science, Charles University in Prague,\nVinicna 7, CZ-12844 Prague 2, Czech Republic.\nThe annotation was added by the NCBI Prokaryotic Genome Annotation\nPipeline (PGAP). Information about PGAP can be found here:\nhttps://www.ncbi.nlm.nih.gov/genome/annotation_prok/\n\n##Genome-Assembly-Data-START##\nAssembly Date :: MAR-2020\nAssembly Method :: Flye v. 2.4.2\nGenome Representation :: Full\nExpected Final Version :: No\nGenome Coverage :: 390.0x\nSequencing Technology :: Oxford Nanopore; Illumina\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI RefSeq\nAnnotation Date :: 02/13/2023 12:48:10\nAnnotation Pipeline :: NCBI Prokaryotic Genome\n Annotation Pipeline (PGAP)\nAnnotation Method :: Best-placed reference protein\n set; GeneMarkS-2+\nAnnotation Software revision :: 6.4\nFeatures Annotated :: Gene; CDS; rRNA; tRNA; ncRNA\nGenes (total) :: 2,678\nCDSs (total) :: 2,626\nGenes (coding) :: 2,587\nCDSs (with protein) :: 2,587\nGenes (RNA) :: 52\nrRNAs :: 2, 2, 2 (5S, 16S, 23S)\ncomplete rRNAs :: 2, 2, 2 (5S, 16S, 23S)\ntRNAs :: 42\nncRNAs :: 4\nPseudo Genes (total) :: 39\nCDSs (without protein) :: 39\nPseudo Genes (ambiguous residues) :: 0 of 39\nPseudo Genes (frameshifted) :: 14 of 39\nPseudo Genes (incomplete) :: 32 of 39\nPseudo Genes (internal stop) :: 3 of 39\nPseudo Genes (multiple problems) :: 9 of 39\nCRISPR Arrays :: 2\n##Genome-Annotation-Data-END##\nCOMPLETENESS: full length.
COORDINATES: protein motif:HMM:TIGR01287.1
GO:0016611 - iron-iron nitrogenase complex [Evidence IEA]; GO:0016612 - molybdenum-iron nitrogenase complex [Evidence IEA]; GO:0016613 - vanadium-iron nitrogenase complex [Evidence IEA]
GO:0016163 - nitrogenase activity [Evidence IEA]
GO:0009399 - nitrogen fixation [Evidence IEA]
Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: protein motif:HMM:TIGR01282.1
GO:0016612 - molybdenum-iron nitrogenase complex [Evidence IEA]
nitrogenase molybdenum-iron protein alpha chain
COORDINATES: protein motif:HMM:TIGR01286.1
nitrogenase molybdenum-iron protein subunit beta
COORDINATES: protein motif:HMM:NF012339.2
GO:0009055 - electron transfer activity [Evidence IEA]; GO:0051536 - iron-sulfur cluster binding [Evidence IEA]
2Fe-2S iron-sulfur cluster-binding protein
COORDINATES: protein motif:HMM:NF012245.2
GO:0007165 - signal transduction [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR01283.1
nitrogenase iron-molybdenum cofactor biosynthesis protein NifE
COORDINATES: protein motif:HMM:TIGR02935.1
NifX-associated nitrogen fixation protein
COORDINATES: protein motif:HMM:NF016938.2
COORDINATES: protein motif:HMM:NF024921.2
GO:0055052 - ATP-binding cassette (ABC) transporter complex, substrate-binding subunit-containing [Evidence IEA]; GO:0009897 - external side of plasma membrane [Evidence IEA]; GO:0030288 - outer membrane-bounded periplasmic space [Evidence IEA]
GO:0015412 - ABC-type molybdate transporter activity [Evidence IEA]; GO:0030973 - molybdate ion binding [Evidence IEA]
GO:0015689 - molybdate ion transport [Evidence IEA]
molybdate ABC transporter substrate-binding protein
COORDINATES: protein motif:HMM:NF015424.2
COORDINATES: similar to AA sequence:RefSeq:WP_019921997.1
GO:0055052 - ATP-binding cassette (ABC) transporter complex, substrate-binding subunit-containing [Evidence IEA]; GO:0005886 - plasma membrane [Evidence IEA]
GO:0015412 - ABC-type molybdate transporter activity [Evidence IEA]
molybdate ABC transporter permease subunit
COORDINATES: protein motif:HMM:NF012235.2
ATP-binding cassette domain-containing protein
COORDINATES: protein motif:HMM:TIGR00638.1
COORDINATES: ab initio prediction:GeneMarkS-2+
Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
COORDINATES: protein motif:HMM:NF012772.2
COORDINATES: protein motif:HMM:NF013970.2
type II toxin-antitoxin system VapC family toxin
COORDINATES: protein motif:HMM:NF014643.2
type II toxin-antitoxin system Phd/YefM family antitoxin
Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
COORDINATES: protein motif:HMM:NF037959.1
COORDINATES: protein motif:HMM:NF017945.2
COORDINATES: protein motif:HMM:NF016238.2
COORDINATES: protein motif:HMM:NF015487.2
TrbG/VirB9 family P-type conjugative transfer protein
COORDINATES: protein motif:HMM:NF015688.2
COORDINATES: protein motif:HMM:TIGR00033.1
GO:0004107 - chorismate synthase activity [Evidence IEA]
GO:0009073 - aromatic amino acid family biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF036772.2
COORDINATES: similar to AA sequence:RefSeq:WP_009618124.1
GO:0009316 - 3-isopropylmalate dehydratase complex [Evidence IEA]
GO:0003861 - 3-isopropylmalate dehydratase activity [Evidence IEA]
GO:0009098 - leucine biosynthetic process [Evidence IEA]
3-isopropylmalate dehydratase large subunit
COORDINATES: protein motif:HMM:NF002458.0
3-isopropylmalate dehydratase small subunit
COORDINATES: protein motif:HMM:NF013069.2
COORDINATES: protein motif:HMM:TIGR01730.1
GO:0005215 - transporter activity [Evidence IEA]
efflux RND transporter periplasmic adaptor subunit
COORDINATES: protein motif:HMM:TIGR01845.1
GO:0009279 - cell outer membrane [Evidence IEA]
GO:0015288 - porin activity [Evidence IEA]
efflux transporter outer membrane subunit
COORDINATES: protein motif:HMM:NF019349.2
COORDINATES: protein motif:HMM:NF012798.2
GO:0015074 - DNA integration [Evidence IEA]; GO:0006310 - DNA recombination [Evidence IEA]
COORDINATES: protein motif:HMM:NF024854.2
COORDINATES: protein motif:HMM:NF013995.2
COORDINATES: protein motif:HMM:NF013088.2
COORDINATES: protein motif:HMM:NF016701.2
COORDINATES: protein motif:HMM:NF015038.2
incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: protein motif:HMM:NF017528.2
TnpB, as the term is used for proteins encoded by IS66 family insertion elements, is considered an accessory protein, since TnpC, encoded by a neighboring gene, is a DDE family transposase.; TnpB, as the term is used for proteins encoded by IS66 family insertion elements, is considered an accessory protein, since TnpC, encoded by a neighboring gene, is a DDE family transposase; Derived by automated computational analysis using gene prediction method: Protein Homology.
IS66 family insertion sequence element accessory protein TnpB
COORDINATES: similar to AA sequence:RefSeq:WP_011236212.1
frameshifted; incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: protein motif:HMM:NF018009.2
PDDEXK nuclease domain-containing protein
COORDINATES: protein motif:HMM:NF037421.2
COORDINATES: protein motif:HMM:NF016876.2
type II toxin-antitoxin system RelE/ParE family toxin
COORDINATES: protein motif:HMM:TIGR02574.1
COORDINATES: protein motif:HMM:NF019997.2
COORDINATES: protein motif:HMM:NF037521.2
zincin-like metallopeptidase domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_004247678.1
COORDINATES: protein motif:HMM:NF016820.2
COORDINATES: protein motif:HMM:NF014043.2
COORDINATES: similar to AA sequence:RefSeq:WP_001247892.1
COORDINATES: protein motif:HMM:NF033559.1
GO:0004803 - transposase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011797823.1
COORDINATES: protein motif:HMM:NF013878.2
COORDINATES: similar to AA sequence:RefSeq:WP_000063681.1
COORDINATES: protein motif:HMM:TIGR02783.1
GO:0009291 - unidirectional conjugation [Evidence IEA]
P-type conjugative transfer protein TrbL
COORDINATES: protein motif:HMM:NF013752.2
COORDINATES: protein motif:HMM:NF018648.2
GO:0006885 - regulation of pH [Evidence IEA]; GO:0006814 - sodium ion transport [Evidence IEA]
COORDINATES: protein motif:HMM:NF013173.2
GO:0033828 - glucosylglycerol-phosphate synthase activity [Evidence IEA]
GO:0006970 - response to osmotic stress [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_019920971.1
COORDINATES: protein motif:HMM:NF016724.2
GO:0005524 - ATP binding [Evidence IEA]; GO:0003677 - DNA binding [Evidence IEA]; GO:0016787 - hydrolase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF037202.2
COORDINATES: protein motif:HMM:NF024700.2
GO:0005524 - ATP binding [Evidence IEA]; GO:0016887 - ATP hydrolysis activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF025468.2
COORDINATES: protein motif:HMM:NF024573.2
COORDINATES: protein motif:HMM:NF024642.2
COORDINATES: protein motif:HMM:NF015397.2
TraI/MobA(P) family conjugative relaxase
COORDINATES: protein motif:HMM:NF015210.2
COORDINATES: similar to AA sequence:RefSeq:WP_086558055.1
COORDINATES: protein motif:HMM:NF025495.2
GO:0004518 - nuclease activity [Evidence IEA]
dsDNA nuclease domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_000132020.1
COORDINATES: protein motif:HMM:NF024755.2
COORDINATES: protein motif:HMM:TIGR03977.1
His-Xaa-Ser system radical SAM maturase HxsC
COORDINATES: protein motif:HMM:TIGR03978.1
His-Xaa-Ser system radical SAM maturase HxsB
COORDINATES: protein motif:HMM:NF038296.1
COORDINATES: protein motif:HMM:NF014581.2
type IV secretory system conjugative DNA transfer family protein
COORDINATES: protein motif:HMM:NF021981.2
COORDINATES: protein motif:HMM:NF013395.2
COORDINATES: protein motif:HMM:NF016837.2
GO:0034257 - nicotinamide riboside transmembrane transporter activity [Evidence IEA]
GO:0034258 - nicotinamide riboside transport [Evidence IEA]
COORDINATES: protein motif:HMM:NF015735.2
COORDINATES: protein motif:HMM:NF010395.0
COORDINATES: protein motif:HMM:NF010404.0
type IV secretion system ATPase VirB4 family; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: protein motif:HMM:NF013530.2
COORDINATES: protein motif:HMM:NF028235.2
TetR/AcrR family transcriptional regulator
COORDINATES: protein motif:HMM:TIGR02780.1
P-type conjugative transfer protein TrbJ
COORDINATES: protein motif:HMM:NF013814.2
COORDINATES: protein motif:HMM:NF013618.2
lytic transglycosylase domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_009459650.1
COORDINATES: protein motif:HMM:TIGR01056.1
GO:0003677 - DNA binding [Evidence IEA]; GO:0003917 - DNA topoisomerase type I (single strand cut, ATP-independent) activity [Evidence IEA]
GO:0006265 - DNA topological change [Evidence IEA]
GO:0003700 - DNA-binding transcription factor activity [Evidence IEA]
GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_019922821.1
GO:0003700 - DNA-binding transcription factor activity [Evidence IEA]; GO:0043565 - sequence-specific DNA binding [Evidence IEA]
helix-turn-helix domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_019922822.1
frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_086558017.1
COORDINATES: protein motif:HMM:NF024698.2
COORDINATES: protein motif:HMM:NF014609.2
PhzF family phenazine biosynthesis protein
COORDINATES: protein motif:HMM:NF016207.2
FMN-binding negative transcriptional regulator
COORDINATES: similar to AA sequence:RefSeq:WP_014834018.1
COORDINATES: similar to AA sequence:RefSeq:WP_016236504.1
COORDINATES: protein motif:HMM:NF019310.2
COORDINATES: similar to AA sequence:RefSeq:WP_018986733.1
nuclear transport factor 2 family protein
COORDINATES: protein motif:HMM:NF012655.2
COORDINATES: protein motif:HMM:NF024565.2
COORDINATES: protein motif:HMM:NF024904.2
COORDINATES: protein motif:HMM:NF024258.2
COORDINATES: similar to AA sequence:RefSeq:WP_017114798.1
COORDINATES: similar to AA sequence:RefSeq:WP_012251120.1
COORDINATES: similar to AA sequence:RefSeq:WP_012206009.1
COORDINATES: similar to AA sequence:RefSeq:WP_012206008.1
COORDINATES: protein motif:HMM:NF014691.2
Fic/DOC family N-terminal domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_003158914.1
COORDINATES: protein motif:HMM:TIGR00180.1
GO:0007059 - chromosome segregation [Evidence IEA]; GO:0000910 - cytokinesis [Evidence IEA]
ParB/RepB/Spo0J family partition protein
COORDINATES: protein motif:HMM:NF027273.2
COORDINATES: protein motif:HMM:NF012920.2
COORDINATES: protein motif:HMM:NF013444.2
COORDINATES: protein motif:HMM:NF001095.0
COORDINATES: protein motif:HMM:NF018813.2
COORDINATES: protein motif:HMM:NF021144.2
GO:0031004 - potassium ion-transporting ATPase complex [Evidence IEA]
GO:0008556 - P-type potassium transmembrane transporter activity [Evidence IEA]
GO:0006813 - potassium ion transport [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_019923167.1
potassium-transporting ATPase subunit KdpA
COORDINATES: similar to AA sequence:RefSeq:WP_011941713.1
potassium-transporting ATPase subunit KdpB
COORDINATES: similar to AA sequence:RefSeq:WP_011941714.1
potassium-transporting ATPase subunit KdpC
COORDINATES: similar to AA sequence:RefSeq:WP_019923164.1
GO:0000155 - phosphorelay sensor kinase activity [Evidence IEA]
GO:0000160 - phosphorelay signal transduction system [Evidence IEA]
two-component system sensor histidine kinase KdpD
COORDINATES: protein motif:HMM:NF007820.0
GO:0000160 - phosphorelay signal transduction system [Evidence IEA]; GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
two-component system response regulator KdpE
COORDINATES: protein motif:HMM:NF003743.0
GO:0016462 - pyrophosphatase activity [Evidence IEA]
GO:0009245 - lipid A biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_017465360.1
COORDINATES: protein motif:HMM:NF025910.2
COORDINATES: similar to AA sequence:RefSeq:WP_020706145.1
GO:0004817 - cysteine-tRNA ligase activity [Evidence IEA]
GO:0006423 - cysteinyl-tRNA aminoacylation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_001118476.1
GO:0005515 - protein binding [Evidence IEA]
GO:0006457 - protein folding [Evidence IEA]; GO:0009408 - response to heat [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_001737966.1
GO:0006457 - protein folding [Evidence IEA]
COORDINATES: protein motif:HMM:NF010737.0
GO:0000774 - adenyl-nucleotide exchange factor activity [Evidence IEA]; GO:0051087 - chaperone binding [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00109.1
GO:0004325 - ferrochelatase activity [Evidence IEA]
GO:0006779 - porphyrin-containing compound biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00331.1
GO:0009408 - response to heat [Evidence IEA]
heat-inducible transcriptional repressor HrcA
COORDINATES: protein motif:HMM:NF002306.0
GO:0003951 - NAD+ kinase activity [Evidence IEA]
GO:0006741 - NADP biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00634.1
GO:0006310 - DNA recombination [Evidence IEA]; GO:0006281 - DNA repair [Evidence IEA]
COORDINATES: protein motif:HMM:NF013434.2
GO:0016645 - oxidoreductase activity, acting on the CH-NH group of donors [Evidence IEA]
FAD-dependent 5-carboxymethylaminomethyl-2-thiouridine(34) oxidoreductase MnmC
COORDINATES: protein motif:HMM:NF028423.2
regulatory signaling modulator protein AmpE
COORDINATES: protein motif:HMM:TIGR00157.1
GO:0005525 - GTP binding [Evidence IEA]; GO:0043022 - ribosome binding [Evidence IEA]
ribosome small subunit-dependent GTPase A
COORDINATES: similar to AA sequence:RefSeq:WP_007114960.1
GO:0000175 - 3'-5'-exoribonuclease activity [Evidence IEA]; GO:0003676 - nucleic acid binding [Evidence IEA]
COORDINATES: protein motif:HMM:NF001419.0
GO:0047134 - protein-disulfide reductase (NAD(P)) activity [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00276.1
GO:0051539 - 4 iron, 4 sulfur cluster binding [Evidence IEA]; GO:0052693 - epoxyqueuosine reductase activity [Evidence IEA]
GO:0008616 - queuosine biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00150.1
GO:0016887 - ATP hydrolysis activity [Evidence IEA]
GO:0006400 - tRNA modification [Evidence IEA]
tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE
COORDINATES: protein motif:HMM:NF013670.2
GO:0008745 - N-acetylmuramoyl-L-alanine amidase activity [Evidence IEA]
GO:0009253 - peptidoglycan catabolic process [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00585.2
GO:0006298 - mismatch repair [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_019924613.1
GO:0052381 - tRNA dimethylallyltransferase activity [Evidence IEA]
tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA
COORDINATES: protein motif:HMM:TIGR00237.1
GO:0009318 - exodeoxyribonuclease VII complex [Evidence IEA]
GO:0008855 - exodeoxyribonuclease VII activity [Evidence IEA]
GO:0006308 - DNA catabolic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF013760.2
MotA/TolQ/ExbB proton channel family protein
COORDINATES: protein motif:HMM:NF014525.2
COORDINATES: protein motif:HMM:NF014645.2
GO:0009029 - tetraacyldisaccharide 4'-kinase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004201390.1
COORDINATES: protein motif:HMM:NF009905.0
GO:0008690 - 3-deoxy-manno-octulosonate cytidylyltransferase activity [Evidence IEA]
GO:0009244 - lipopolysaccharide core region biosynthetic process [Evidence IEA]
3-deoxy-manno-octulosonate cytidylyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_019921817.1
GO:0004017 - adenylate kinase activity [Evidence IEA]; GO:0005524 - ATP binding [Evidence IEA]
GO:0006139 - nucleobase-containing compound metabolic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF010675.0
COORDINATES: protein motif:HMM:NF012413.2
COORDINATES: similar to AA sequence:RefSeq:WP_019921371.1
COORDINATES: protein motif:HMM:NF016064.2
YeeE/YedE thiosulfate transporter family protein
COORDINATES: similar to AA sequence:RefSeq:WP_019919880.1
COORDINATES: protein motif:HMM:NF013793.2
COORDINATES: similar to AA sequence:RefSeq:WP_086558073.1
COORDINATES: similar to AA sequence:RefSeq:WP_019921171.1
GO:0006749 - glutathione metabolic process [Evidence IEA]
glutathione-dependent disulfide-bond oxidoreductase
COORDINATES: protein motif:HMM:NF012472.2
GO:0046872 - metal ion binding [Evidence IEA]
COORDINATES: protein motif:HMM:NF013704.2
COORDINATES: protein motif:HMM:NF014069.2
COORDINATES: similar to AA sequence:RefSeq:WP_086558333.1
COORDINATES: protein motif:HMM:TIGR00254.1
incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_017392676.1
GO:0008324 - monoatomic cation transmembrane transporter activity [Evidence IEA]
GO:0006812 - monoatomic cation transport [Evidence IEA]; GO:0055085 - transmembrane transport [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR02047.1
GO:0003677 - DNA binding [Evidence IEA]; GO:0003700 - DNA-binding transcription factor activity [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]
GO:0045893 - positive regulation of DNA-templated transcription [Evidence IEA]
Cd(II)/Pb(II)-responsive transcriptional regulator
COORDINATES: protein motif:HMM:TIGR00391.1
COORDINATES: protein motif:HMM:NF012592.2
nickel-dependent hydrogenase large subunit
COORDINATES: similar to AA sequence:RefSeq:WP_010646699.1
GO:0009055 - electron transfer activity [Evidence IEA]; GO:0005506 - iron ion binding [Evidence IEA]
GO:0022904 - respiratory electron transport chain [Evidence IEA]
Ni/Fe-hydrogenase, b-type cytochrome subunit
COORDINATES: similar to AA sequence:RefSeq:WP_011516273.1
COORDINATES: protein motif:HMM:TIGR00229.1
GO:0016151 - nickel cation binding [Evidence IEA]
COORDINATES: protein motif:HMM:NF013242.2
COORDINATES: protein motif:HMM:NF012385.2
sigma-54 dependent transcriptional regulator
COORDINATES: similar to AA sequence:RefSeq:WP_011516280.1
hydrogenase expression/formation protein HypE
COORDINATES: protein motif:HMM:NF014034.2
GO:0016530 - metallochaperone activity [Evidence IEA]
GO:0036211 - protein modification process [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00074.1
HypC/HybG/HupF family hydrogenase formation chaperone
COORDINATES: protein motif:HMM:NF013468.2
COORDINATES: protein motif:HMM:NF007775.0
GO:0003924 - GTPase activity [Evidence IEA]; GO:0016151 - nickel cation binding [Evidence IEA]
GO:0051604 - protein maturation [Evidence IEA]
hydrogenase nickel incorporation protein HypB
COORDINATES: similar to AA sequence:RefSeq:WP_011516275.1
GO:0008901 - ferredoxin hydrogenase activity [Evidence IEA]
hydrogenase maturation nickel metallochaperone HypA
COORDINATES: protein motif:HMM:NF023365.2
[NiFe]-hydrogenase assembly chaperone HybE
COORDINATES: protein motif:HMM:NF012522.2
COORDINATES: protein motif:HMM:NF016682.2
hydrogenase expression/formation protein
COORDINATES: protein motif:HMM:NF019092.2
COORDINATES: protein motif:HMM:TIGR00140.1
HyaD/HybD family hydrogenase maturation endopeptidase
COORDINATES: similar to AA sequence:RefSeq:WP_002898704.1
GO:0010181 - FMN binding [Evidence IEA]; GO:0003955 - NAD(P)H dehydrogenase (quinone) activity [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR03156.1
GO:0008150 - biological_process [Evidence IEA]
COORDINATES: protein motif:HMM:NF017026.2
sensor domain-containing diguanylate cyclase
COORDINATES: protein motif:HMM:NF041374.1
GDCCVxC domain-containing (seleno)protein
COORDINATES: protein motif:HMM:TIGR00686.1
zinc ribbon domain-containing protein YjdM
PAS domain-containing hybrid sensor histidine kinase/response regulator
COORDINATES: protein motif:HMM:NF020084.2
FIST C-terminal domain-containing protein
COORDINATES: protein motif:HMM:NF015506.2
GO:0015291 - secondary active transmembrane transporter activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF012801.2
COORDINATES: protein motif:HMM:TIGR00757.1
GO:0004540 - ribonuclease activity [Evidence IEA]
GO:0006401 - RNA catabolic process [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00005.1
GO:0009982 - pseudouridine synthase activity [Evidence IEA]
GO:0001522 - pseudouridine synthesis [Evidence IEA]; GO:0009451 - RNA modification [Evidence IEA]
COORDINATES: protein motif:HMM:NF014591.2
GO:0000917 - division septum assembly [Evidence IEA]
COORDINATES: protein motif:HMM:NF014657.2
COORDINATES: similar to AA sequence:RefSeq:WP_009889986.1
GO:0022625 - cytosolic large ribosomal subunit [Evidence IEA]; GO:0000315 - organellar large ribosomal subunit [Evidence IEA]
GO:0003735 - structural constituent of ribosome [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00182.1
GO:0043811 - phosphate:acyl-[acyl carrier protein] acyltransferase activity [Evidence IEA]
GO:0008610 - lipid biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_009566797.1
COORDINATES: similar to AA sequence:RefSeq:WP_019920171.1
GO:0004314 - [acyl-carrier-protein] S-malonyltransferase activity [Evidence IEA]
GO:0006633 - fatty acid biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_002442508.1
GO:0004316 - 3-oxoacyl-[acyl-carrier-protein] reductase (NADPH) activity [Evidence IEA]; GO:0051287 - NAD binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012510218.1
COORDINATES: similar to AA sequence:RefSeq:WP_019882197.1
GO:0004315 - 3-oxoacyl-[acyl-carrier-protein] synthase activity [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00247.1
GO:0008932 - lytic endotransglycosylase activity [Evidence IEA]
GO:0071555 - cell wall organization [Evidence IEA]; GO:0009252 - peptidoglycan biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00041.1
GO:0004798 - thymidylate kinase activity [Evidence IEA]
GO:0015949 - nucleobase-containing small molecule interconversion [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00678.1
GO:0009360 - DNA polymerase III complex [Evidence IEA]
GO:0003887 - DNA-directed DNA polymerase activity [Evidence IEA]
GO:0006260 - DNA replication [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_019921217.1
COORDINATES: protein motif:HMM:NF013460.2
COORDINATES: protein motif:HMM:NF016176.2
COORDINATES: protein motif:HMM:NF014593.2
GO:0003864 - 3-methyl-2-oxobutanoate hydroxymethyltransferase activity [Evidence IEA]
GO:0015940 - pantothenate biosynthetic process [Evidence IEA]
3-methyl-2-oxobutanoate hydroxymethyltransferase
COORDINATES: protein motif:HMM:NF014385.2
COORDINATES: protein motif:HMM:NF027890.2
COORDINATES: protein motif:HMM:NF019843.2
COORDINATES: protein motif:HMM:NF022610.2
COORDINATES: protein motif:HMM:NF020123.2
COORDINATES: protein motif:HMM:TIGR00553.1
GO:0046820 - 4-amino-4-deoxychorismate synthase activity [Evidence IEA]
GO:0009396 - folic acid-containing compound biosynthetic process [Evidence IEA]; GO:0008153 - para-aminobenzoic acid biosynthetic process [Evidence IEA]
aminodeoxychorismate synthase component I
COORDINATES: protein motif:HMM:NF014757.2
3-hydroxyacyl-CoA dehydrogenase/enoyl-CoA hydratase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_019923366.1
GO:0016746 - acyltransferase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_003819290.1
electron transfer flavoprotein subunit beta/FixA family protein
COORDINATES: similar to AA sequence:RefSeq:WP_008642612.1
COORDINATES: similar to AA sequence:RefSeq:WP_002297874.1
GO:0004068 - aspartate 1-decarboxylase activity [Evidence IEA]
GO:0006523 - alanine biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_017404447.1
GO:0004514 - nicotinate-nucleotide diphosphorylase (carboxylating) activity [Evidence IEA]
GO:0019363 - pyridine nucleotide biosynthetic process [Evidence IEA]
carboxylating nicotinate-nucleotide diphosphorylase
COORDINATES: similar to AA sequence:RefSeq:WP_019921105.1
GO:0051539 - 4 iron, 4 sulfur cluster binding [Evidence IEA]; GO:0008987 - quinolinate synthetase A activity [Evidence IEA]
GO:0009435 - NAD biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_019921115.1
GO:0008734 - L-aspartate oxidase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF012301.2
COORDINATES: similar to AA sequence:RefSeq:WP_019921346.1
GO:0008879 - glucose-1-phosphate thymidylyltransferase activity [Evidence IEA]
GO:0019305 - dTDP-rhamnose biosynthetic process [Evidence IEA]; GO:0009243 - O antigen biosynthetic process [Evidence IEA]
glucose-1-phosphate thymidylyltransferase RfbA
COORDINATES: similar to AA sequence:RefSeq:WP_019921345.1
GO:0008460 - dTDP-glucose 4,6-dehydratase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF008775.0
GO:0045900 - negative regulation of translational elongation [Evidence IEA]
energy-dependent translational throttle protein EttA
COORDINATES: protein motif:HMM:NF012403.2
GO:0005524 - ATP binding [Evidence IEA]; GO:0140658 - ATP-dependent chromatin remodeler activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF008589.1
GO:0022857 - transmembrane transporter activity [Evidence IEA]
GO:0055085 - transmembrane transport [Evidence IEA]
MdtA/MuxA family multidrug efflux RND transporter periplasmic adaptor subunit
COORDINATES: protein motif:HMM:NF033617.1
multidrug efflux RND transporter permease subunit
COORDINATES: similar to AA sequence:RefSeq:WP_019922030.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0004359 - glutaminase activity [Evidence IEA]; GO:0003952 - NAD+ synthase (glutamine-hydrolyzing) activity [Evidence IEA]
GO:0009435 - NAD biosynthetic process [Evidence IEA]; GO:0006807 - nitrogen compound metabolic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF014910.2
COORDINATES: protein motif:HMM:TIGR00631.1
GO:0009380 - excinuclease repair complex [Evidence IEA]
GO:0005524 - ATP binding [Evidence IEA]; GO:0016887 - ATP hydrolysis activity [Evidence IEA]; GO:0003677 - DNA binding [Evidence IEA]; GO:0016787 - hydrolase activity [Evidence IEA]; GO:0005515 - protein binding [Evidence IEA]
GO:0006289 - nucleotide-excision repair [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_020702008.1
COORDINATES: similar to AA sequence:RefSeq:WP_007117248.1
GO:0046872 - metal ion binding [Evidence IEA]; GO:0004784 - superoxide dismutase activity [Evidence IEA]
GO:0006801 - superoxide metabolic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF012790.2
rhodanese-like domain-containing protein
COORDINATES: protein motif:HMM:NF019430.2
Spy/CpxP family protein refolding chaperone
COORDINATES: similar to AA sequence:RefSeq:WP_014028076.1
COORDINATES: protein motif:HMM:NF019988.2
3-oxoacyl-[acyl-carrier-protein] synthase III C-terminal domain-containing protein
COORDINATES: protein motif:HMM:NF013646.2
COORDINATES: protein motif:HMM:NF018743.2
COORDINATES: similar to AA sequence:RefSeq:WP_012537026.1
COORDINATES: protein motif:HMM:NF013672.2
polysaccharide deacetylase family protein
COORDINATES: protein motif:HMM:NF013106.2
transglycosylase domain-containing protein
COORDINATES: protein motif:HMM:NF039822.1
COORDINATES: protein motif:HMM:NF039473.1
COORDINATES: protein motif:HMM:NF024592.2
COORDINATES: protein motif:HMM:NF020660.2
GO:0030246 - carbohydrate binding [Evidence IEA]; GO:0003824 - catalytic activity [Evidence IEA]
GO:0005975 - carbohydrate metabolic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF015052.2
COORDINATES: similar to AA sequence:RefSeq:WP_018985399.1
GO:0008878 - glucose-1-phosphate adenylyltransferase activity [Evidence IEA]
GO:0005978 - glycogen biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF008967.0
GO:0003844 - 1,4-alpha-glucan branching enzyme activity [Evidence IEA]; GO:0043169 - cation binding [Evidence IEA]; GO:0004553 - hydrolase activity, hydrolyzing O-glycosyl compounds [Evidence IEA]
GO:0005975 - carbohydrate metabolic process [Evidence IEA]; GO:0005978 - glycogen biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_020701676.1
GO:0004347 - glucose-6-phosphate isomerase activity [Evidence IEA]
GO:0006094 - gluconeogenesis [Evidence IEA]; GO:0006096 - glycolytic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF001899.0
GO:0004373 - glycogen (starch) synthase activity [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR02094.1
COORDINATES: protein motif:HMM:NF004044.1
GO:0009340 - DNA topoisomerase IV complex [Evidence IEA]
GO:0003918 - DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF012430.2
COORDINATES: protein motif:HMM:NF025114.2
COORDINATES: protein motif:HMM:NF024874.2
COORDINATES: protein motif:HMM:NF033919.1
COORDINATES: protein motif:HMM:NF033920.0
COORDINATES: similar to AA sequence:RefSeq:WP_018985004.1
GO:0008444 - CDP-diacylglycerol-glycerol-3-phosphate 3-phosphatidyltransferase activity [Evidence IEA]
GO:0008654 - phospholipid biosynthetic process [Evidence IEA]
CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase
COORDINATES: protein motif:HMM:NF001824.0
GO:0009381 - excinuclease ABC activity [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR01297.1
cation diffusion facilitator family transporter
COORDINATES: protein motif:HMM:NF003740.0
GO:0004553 - hydrolase activity, hydrolyzing O-glycosyl compounds [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00556.1
GO:0008897 - holo-[acyl-carrier-protein] synthase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_006762396.1
GO:0033856 - pyridoxine 5'-phosphate synthase activity [Evidence IEA]
GO:0008615 - pyridoxine biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00613.1
COORDINATES: protein motif:HMM:NF000908.1
GO:0005525 - GTP binding [Evidence IEA]; GO:0003723 - RNA binding [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR02191.1
GO:0004525 - ribonuclease III activity [Evidence IEA]
GO:0006396 - RNA processing [Evidence IEA]
GO:0004252 - serine-type endopeptidase activity [Evidence IEA]
GO:0009306 - protein secretion [Evidence IEA]; GO:0006465 - signal peptide processing [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_009088658.1
GO:0005525 - GTP binding [Evidence IEA]; GO:0003924 - GTPase activity [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR02037.1
GO:0030288 - outer membrane-bounded periplasmic space [Evidence IEA]
GO:0005515 - protein binding [Evidence IEA]; GO:0004252 - serine-type endopeptidase activity [Evidence IEA]
GO:0006508 - proteolysis [Evidence IEA]; GO:0006950 - response to stress [Evidence IEA]
COORDINATES: protein motif:HMM:NF015825.2
MucB/RseB C-terminal domain-containing protein
COORDINATES: protein motif:HMM:NF015810.2
sigma-E factor negative regulatory protein
COORDINATES: similar to AA sequence:RefSeq:WP_006120509.1
GO:0016987 - sigma factor activity [Evidence IEA]
GO:0006352 - DNA-templated transcription initiation [Evidence IEA]; GO:0006979 - response to oxidative stress [Evidence IEA]
COORDINATES: protein motif:HMM:NF017038.2
electron transfer flavoprotein-ubiquinone oxidoreductase
COORDINATES: protein motif:HMM:NF016825.2
cyclodeaminase/cyclohydrolase family protein
COORDINATES: protein motif:HMM:NF014881.2
NADP-dependent methylenetetrahydromethanopterin/methylenetetrahydrofolate dehydrogenase
COORDINATES: protein motif:HMM:NF012656.2
COORDINATES: similar to AA sequence:RefSeq:WP_017875140.1
COORDINATES: protein motif:HMM:NF013934.2
GO:0030272 - 5-formyltetrahydrofolate cyclo-ligase activity [Evidence IEA]
GO:0006730 - one-carbon metabolic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF013228.2
COORDINATES: protein motif:HMM:NF015902.3
GO:0051301 - cell division [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_020701969.1
GO:0004148 - dihydrolipoyl dehydrogenase activity [Evidence IEA]
GO:0045454 - cell redox homeostasis [Evidence IEA]; GO:0051068 - dihydrolipoamide metabolic process [Evidence IEA]; GO:0006096 - glycolytic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_000179874.1
GO:0045252 - oxoglutarate dehydrogenase complex [Evidence IEA]
GO:0004149 - dihydrolipoyllysine-residue succinyltransferase activity [Evidence IEA]
GO:0006099 - tricarboxylic acid cycle [Evidence IEA]
2-oxoglutarate dehydrogenase complex dihydrolipoyllysine-residue succinyltransferase
COORDINATES: protein motif:HMM:NF006914.0
GO:0004591 - oxoglutarate dehydrogenase (succinyl-transferring) activity [Evidence IEA]; GO:0030976 - thiamine pyrophosphate binding [Evidence IEA]
2-oxoglutarate dehydrogenase E1 component
COORDINATES: similar to AA sequence:RefSeq:WP_020701960.1
GO:0004108 - citrate (Si)-synthase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF015870.2
succinate dehydrogenase assembly factor 2
COORDINATES: similar to AA sequence:RefSeq:WP_020701958.1
succinate dehydrogenase iron-sulfur subunit
COORDINATES: similar to AA sequence:RefSeq:WP_009241008.1
GO:0050660 - flavin adenine dinucleotide binding [Evidence IEA]; GO:0016627 - oxidoreductase activity, acting on the CH-CH group of donors [Evidence IEA]
GO:0022900 - electron transport chain [Evidence IEA]; GO:0006099 - tricarboxylic acid cycle [Evidence IEA]
succinate dehydrogenase flavoprotein subunit
COORDINATES: similar to AA sequence:RefSeq:WP_009522014.1
GO:0045282 - plasma membrane succinate dehydrogenase complex [Evidence IEA]
GO:0000104 - succinate dehydrogenase activity [Evidence IEA]
succinate dehydrogenase, hydrophobic membrane anchor protein
COORDINATES: protein motif:HMM:NF013307.2
succinate dehydrogenase, cytochrome b556 subunit
COORDINATES: protein motif:HMM:NF006757.0
GO:0003994 - aconitate hydratase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF003916.0
GO:0016615 - malate dehydrogenase activity [Evidence IEA]
GO:0006108 - malate metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_018985762.1
GO:0004124 - cysteine synthase activity [Evidence IEA]
GO:0006535 - cysteine biosynthetic process from serine [Evidence IEA]
COORDINATES: protein motif:HMM:NF024245.2
helix-hairpin-helix domain-containing protein
COORDINATES: protein motif:HMM:TIGR02197.1
GO:0008712 - ADP-glyceromanno-heptose 6-epimerase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_019921784.1
GO:0016773 - phosphotransferase activity, alcohol group as acceptor [Evidence IEA]
D-glycero-beta-D-manno-heptose-7-phosphate kinase
COORDINATES: protein motif:HMM:TIGR03026.1
UDP-glucose/GDP-mannose dehydrogenase family protein
COORDINATES: protein motif:HMM:NF001273.0
GO:0004590 - orotidine-5'-phosphate decarboxylase activity [Evidence IEA]
GO:0006207 - 'de novo' pyrimidine nucleobase biosynthetic process [Evidence IEA]; GO:0044205 - 'de novo' UMP biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF008755.0
GO:0008653 - lipopolysaccharide metabolic process [Evidence IEA]
lipopolysaccharide assembly protein LapB
COORDINATES: protein motif:HMM:NF018058.2
GO:0005886 - plasma membrane [Evidence IEA]
lipopolysaccharide assembly protein LapA domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_018985241.1
GO:0006310 - DNA recombination [Evidence IEA]; GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
COORDINATES: protein motif:HMM:NF004952.0
GO:0003723 - RNA binding [Evidence IEA]; GO:0003735 - structural constituent of ribosome [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_019921780.1
GO:0004127 - cytidylate kinase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF012497.2
GO:0003866 - 3-phosphoshikimate 1-carboxyvinyltransferase activity [Evidence IEA]
GO:0009423 - chorismate biosynthetic process [Evidence IEA]
3-phosphoshikimate 1-carboxyvinyltransferase
COORDINATES: protein motif:HMM:NF014234.2
GO:0008977 - prephenate dehydrogenase (NAD+) activity [Evidence IEA]; GO:0004665 - prephenate dehydrogenase (NADP+) activity [Evidence IEA]
GO:0006571 - tyrosine biosynthetic process [Evidence IEA]
prephenate dehydrogenase/arogenate dehydrogenase family protein
COORDINATES: protein motif:HMM:TIGR01141.1
GO:0004400 - histidinol-phosphate transaminase activity [Evidence IEA]
GO:0000105 - histidine biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_019882425.1
GO:0004664 - prephenate dehydratase activity [Evidence IEA]
GO:0009094 - L-phenylalanine biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF012488.2
GO:0003824 - catalytic activity [Evidence IEA]; GO:0004648 - O-phospho-L-serine:2-oxoglutarate aminotransferase activity [Evidence IEA]
GO:0006564 - L-serine biosynthetic process [Evidence IEA]
3-phosphoserine/phosphohydroxythreonine transaminase
COORDINATES: protein motif:HMM:TIGR01063.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0003677 - DNA binding [Evidence IEA]; GO:0003916 - DNA topoisomerase activity [Evidence IEA]; GO:0003918 - DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) activity [Evidence IEA]
GO:0006259 - DNA metabolic process [Evidence IEA]; GO:0006265 - DNA topological change [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR01983.1
GO:0008689 - 3-demethylubiquinone-9 3-O-methyltransferase activity [Evidence IEA]
GO:0006744 - ubiquinone biosynthetic process [Evidence IEA]
bifunctional 2-polyprenyl-6-hydroxyphenol methylase/3-demethylubiquinol 3-O-methyltransferase UbiG
COORDINATES: protein motif:HMM:NF012905.2
GO:0016787 - hydrolase activity [Evidence IEA]
GO:0008152 - metabolic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF011996.0
tRNA 5-hydroxyuridine modification protein YegQ
GO:0015562 - efflux transmembrane transporter activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF022577.2
COORDINATES: protein motif:HMM:NF033788.1
metalloregulator ArsR/SmtB family transcription factor
COORDINATES: protein motif:HMM:NF006564.0
COORDINATES: protein motif:HMM:NF013379.2
COORDINATES: protein motif:HMM:NF015431.2
COORDINATES: protein motif:HMM:TIGR00230.1
GO:0000023 - maltose metabolic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF014708.2
COORDINATES: protein motif:HMM:NF008434.0
GO:0051536 - iron-sulfur cluster binding [Evidence IEA]
COORDINATES: protein motif:HMM:NF008439.0
GO:0071949 - FAD binding [Evidence IEA]; GO:0016491 - oxidoreductase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_019924650.1
GO:0003824 - catalytic activity [Evidence IEA]; GO:0050660 - flavin adenine dinucleotide binding [Evidence IEA]
FAD-linked oxidase C-terminal domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_004854155.1
COORDINATES: protein motif:HMM:NF012492.2
GO:0005524 - ATP binding [Evidence IEA]; GO:0003676 - nucleic acid binding [Evidence IEA]
COORDINATES: nucleotide motif:Rfam:14.4:RF00023
Derived by automated computational analysis using gene prediction method: cmsearch.
COORDINATES: protein motif:HMM:NF019237.2
COORDINATES: similar to AA sequence:RefSeq:WP_006410675.1
COORDINATES: similar to AA sequence:RefSeq:WP_000429833.1
GO:0001228 - DNA-binding transcription activator activity, RNA polymerase II-specific [Evidence IEA]
Hg(II)-responsive transcriptional regulator
COORDINATES: similar to AA sequence:RefSeq:YP_005229639.1
COORDINATES: similar to AA sequence:RefSeq:WP_004636750.1
GO:0045340 - mercury ion binding [Evidence IEA]
mercury resistance system periplasmic binding protein MerP
COORDINATES: similar to AA sequence:RefSeq:WP_008063286.1
mercury resistance system transport protein MerF
COORDINATES: similar to AA sequence:RefSeq:WP_008063285.1
GO:0016152 - mercury (II) reductase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF024590.2
COORDINATES: protein motif:HMM:NF024803.2
heavy metal-responsive transcriptional regulator
COORDINATES: protein motif:HMM:NF014713.2
GO:0017004 - cytochrome complex assembly [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_009521752.1
COORDINATES: protein motif:HMM:NF012464.2
COORDINATES: protein motif:HMM:NF022598.2
COORDINATES: protein motif:HMM:NF024872.2
COORDINATES: similar to AA sequence:RefSeq:WP_013246702.1
COORDINATES: similar to AA sequence:RefSeq:WP_020200558.1
COORDINATES: protein motif:HMM:NF040389.1
COORDINATES: similar to AA sequence:RefSeq:WP_020200556.1
COORDINATES: protein motif:HMM:NF037411.2
COORDINATES: protein motif:HMM:NF037410.2
COORDINATES: similar to AA sequence:RefSeq:WP_020200547.1
COORDINATES: protein motif:HMM:NF013964.2
COORDINATES: protein motif:HMM:NF013828.2
COORDINATES: protein motif:HMM:NF033546.1
COORDINATES: similar to AA sequence:RefSeq:WP_020909877.1
frameshifted; incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_003150546.1
GO:0004521 - endoribonuclease activity [Evidence IEA]; GO:0005515 - protein binding [Evidence IEA]
putative toxin-antitoxin system toxin component, PIN family
COORDINATES: similar to AA sequence:RefSeq:WP_013105051.1
ribbon-helix-helix domain-containing protein
COORDINATES: protein motif:HMM:NF012870.2
GO:0015074 - DNA integration [Evidence IEA]
DDE-type integrase/transposase/recombinase
COORDINATES: protein motif:HMM:NF024793.2
COORDINATES: similar to AA sequence:RefSeq:WP_013965259.1
COORDINATES: protein motif:HMM:NF021622.2
COORDINATES: protein motif:HMM:NF019348.2
COORDINATES: protein motif:HMM:NF013980.2
SprT family zinc-dependent metalloprotease
COORDINATES: protein motif:HMM:TIGR00348.1
type I restriction endonuclease subunit R
COORDINATES: protein motif:HMM:NF013579.2
GO:0006304 - DNA modification [Evidence IEA]
COORDINATES: protein motif:HMM:NF014442.2
class I SAM-dependent DNA methyltransferase
COORDINATES: protein motif:HMM:NF025084.2
COORDINATES: protein motif:HMM:TIGR02292.1
COORDINATES: protein motif:HMM:TIGR01448.1
GO:0004386 - helicase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_017365788.1
helix-turn-helix transcriptional regulator
COORDINATES: similar to AA sequence:RefSeq:WP_004869841.1
COORDINATES: similar to AA sequence:RefSeq:WP_009238673.1
COORDINATES: similar to AA sequence:RefSeq:WP_012479854.1
COORDINATES: similar to AA sequence:RefSeq:WP_012479853.1
COORDINATES: similar to AA sequence:RefSeq:WP_012479852.1
COORDINATES: similar to AA sequence:RefSeq:WP_012479851.1
COORDINATES: similar to AA sequence:RefSeq:WP_012479850.1
COORDINATES: protein motif:HMM:NF014273.2
COORDINATES: similar to AA sequence:RefSeq:WP_012479843.1
COORDINATES: protein motif:HMM:NF005477.0
GO:0003896 - DNA primase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF019945.2
COORDINATES: similar to AA sequence:RefSeq:WP_009238689.1
COORDINATES: protein motif:HMM:NF024098.2
COORDINATES: protein motif:HMM:NF016975.2
P27 family phage terminase small subunit
COORDINATES: protein motif:HMM:NF015321.2
COORDINATES: protein motif:HMM:TIGR01537.1
GO:0044423 - virion component [Evidence IEA]
GO:0005198 - structural molecule activity [Evidence IEA]
GO:0019068 - virion assembly [Evidence IEA]
COORDINATES: protein motif:HMM:NF013506.2
COORDINATES: protein motif:HMM:NF025903.2
COORDINATES: protein motif:HMM:NF013098.2
COORDINATES: protein motif:HMM:NF024092.2
COORDINATES: protein motif:HMM:NF012792.2
COORDINATES: protein motif:HMM:TIGR01554.2
COORDINATES: protein motif:HMM:TIGR02215.1
GO:0016032 - viral process [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR01563.1
COORDINATES: protein motif:HMM:TIGR01725.1
COORDINATES: protein motif:HMM:NF022810.2
COORDINATES: protein motif:HMM:NF017355.2
toxin-antitoxin system HicB family antitoxin
COORDINATES: protein motif:HMM:NF013954.2
GO:0004040 - amidase activity [Evidence IEA]
glucosaminidase domain-containing protein
COORDINATES: protein motif:HMM:NF013053.2
isochorismatase family cysteine hydrolase
COORDINATES: similar to AA sequence:RefSeq:WP_086558010.1
COORDINATES: protein motif:HMM:NF020901.2
COORDINATES: protein motif:HMM:NF027267.2
GO:0003700 - DNA-binding transcription factor activity [Evidence IEA]; GO:0097351 - toxin sequestering activity [Evidence IEA]
GO:0001558 - regulation of cell growth [Evidence IEA]
type II toxin-antitoxin system PrlF family antitoxin
COORDINATES: similar to AA sequence:RefSeq:WP_012250633.1
COORDINATES: protein motif:HMM:NF012711.2
COORDINATES: protein motif:HMM:NF019421.2
type II toxin-antitoxin system HipA family toxin
COORDINATES: protein motif:HMM:TIGR03070.1
COORDINATES: protein motif:HMM:NF013867.2
GO:0000156 - phosphorelay response regulator activity [Evidence IEA]; GO:0008984 - protein-glutamate methylesterase activity [Evidence IEA]
GO:0006935 - chemotaxis [Evidence IEA]; GO:0000160 - phosphorelay signal transduction system [Evidence IEA]
PAS domain-containing sensor histidine kinase
COORDINATES: similar to AA sequence:RefSeq:WP_017524830.1
GO:0019899 - enzyme binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_009618222.1
COORDINATES: protein motif:HMM:TIGR02666.1
GO:0051539 - 4 iron, 4 sulfur cluster binding [Evidence IEA]
GO:0006777 - Mo-molybdopterin cofactor biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_001954004.1
COORDINATES: protein motif:HMM:TIGR00176.1
GO:0003824 - catalytic activity [Evidence IEA]; GO:0005525 - GTP binding [Evidence IEA]
molybdopterin-guanine dinucleotide biosynthesis protein B
COORDINATES: protein motif:HMM:NF015418.2
COORDINATES: protein motif:HMM:NF014636.2
COORDINATES: protein motif:HMM:NF012602.2
GO:0016491 - oxidoreductase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF018884.2
bifunctional protein-serine/threonine kinase/phosphatase
COORDINATES: protein motif:HMM:TIGR02378.1
GO:0051537 - 2 iron, 2 sulfur cluster binding [Evidence IEA]; GO:0008942 - nitrite reductase [NAD(P)H] activity [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR02374.1
GO:0050660 - flavin adenine dinucleotide binding [Evidence IEA]; GO:0050661 - NADP binding [Evidence IEA]; GO:0008942 - nitrite reductase [NAD(P)H] activity [Evidence IEA]; GO:0016491 - oxidoreductase activity [Evidence IEA]
GO:0042128 - nitrate assimilation [Evidence IEA]
COORDINATES: protein motif:HMM:NF024772.2
CmpA/NrtA family ABC transporter substrate-binding protein
COORDINATES: protein motif:HMM:NF007959.0
molybdopterin synthase catalytic subunit MoaE
COORDINATES: protein motif:HMM:TIGR00581.1
GO:0003824 - catalytic activity [Evidence IEA]
cyclic pyranopterin monophosphate synthase MoaC
COORDINATES: protein motif:HMM:TIGR02665.1
GO:0005525 - GTP binding [Evidence IEA]; GO:0070568 - guanylyltransferase activity [Evidence IEA]
molybdenum cofactor guanylyltransferase MobA
COORDINATES: protein motif:HMM:NF025596.2
GO:0003677 - DNA binding [Evidence IEA]; GO:0004803 - transposase activity [Evidence IEA]
GO:0006313 - transposition, DNA-mediated [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR01613.1
COORDINATES: similar to AA sequence:RefSeq:WP_004869856.1
COORDINATES: similar to AA sequence:RefSeq:WP_013124611.1
type II toxin-antitoxin system RelB/DinJ family antitoxin
COORDINATES: similar to AA sequence:RefSeq:WP_019920430.1
type II toxin-antitoxin system YafQ family toxin
COORDINATES: similar to AA sequence:RefSeq:WP_011798662.1
COORDINATES: similar to AA sequence:RefSeq:WP_011494290.1
COORDINATES: protein motif:HMM:NF025080.2
COORDINATES: protein motif:HMM:NF015642.2
COORDINATES: similar to AA sequence:RefSeq:WP_076611328.1
C-terminal helicase domain-containing protein
COORDINATES: protein motif:HMM:NF012521.2
COORDINATES: protein motif:HMM:TIGR01777.1
COORDINATES: similar to AA sequence:RefSeq:WP_018985896.1
GO:0004462 - lactoylglutathione lyase activity [Evidence IEA]
GO:0005975 - carbohydrate metabolic process [Evidence IEA]; GO:0051596 - methylglyoxal catabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_016445091.1
COORDINATES: protein motif:HMM:NF023036.2
translesion error-prone DNA polymerase V autoproteolytic subunit
COORDINATES: protein motif:HMM:NF002955.0
COORDINATES: protein motif:HMM:NF013188.2
COORDINATES: protein motif:HMM:NF025363.2
COORDINATES: protein motif:HMM:NF018980.2
COORDINATES: protein motif:HMM:NF017742.2
COORDINATES: similar to AA sequence:RefSeq:WP_019923543.1
COORDINATES: protein motif:HMM:NF023425.2
COORDINATES: protein motif:HMM:NF017534.2
COORDINATES: similar to AA sequence:RefSeq:WP_012076500.1
COORDINATES: similar to AA sequence:RefSeq:WP_008073352.1
GO:0015035 - protein-disulfide reductase activity [Evidence IEA]
GO:0006662 - glycerol ether metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_018151085.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0008186 - ATP-dependent activity, acting on RNA [Evidence IEA]; GO:0003723 - RNA binding [Evidence IEA]
GO:0006353 - DNA-templated transcription termination [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_003151132.1
COORDINATES: protein motif:HMM:TIGR01967.1
COORDINATES: protein motif:HMM:NF012970.2
COORDINATES: similar to AA sequence:RefSeq:WP_019923568.1
ABC transporter ATP-binding protein/permease
COORDINATES: protein motif:HMM:TIGR00431.1
GO:0004730 - pseudouridylate synthase activity [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00082.1
GO:0019843 - rRNA binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_019921611.1
GO:0003743 - translation initiation factor activity [Evidence IEA]
GO:0006413 - translational initiation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_020183403.1
COORDINATES: similar to AA sequence:RefSeq:WP_014573873.1
GO:0042274 - ribosomal small subunit biogenesis [Evidence IEA]
COORDINATES: protein motif:HMM:NF013079.2
COORDINATES: similar to AA sequence:RefSeq:WP_019920805.1
GO:0004799 - thymidylate synthase activity [Evidence IEA]
GO:0009265 - 2'-deoxyribonucleotide biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF019350.2
GO:0000155 - phosphorelay sensor kinase activity [Evidence IEA]; GO:0046983 - protein dimerization activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF015557.2
COORDINATES: protein motif:HMM:TIGR00498.1
GO:0006282 - regulation of DNA repair [Evidence IEA]; GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
COORDINATES: protein motif:HMM:NF007914.0
COORDINATES: protein motif:HMM:TIGR00401.1
GO:0033744 - L-methionine:thioredoxin-disulfide S-oxidoreductase activity [Evidence IEA]; GO:0008113 - peptide-methionine (S)-S-oxide reductase activity [Evidence IEA]
GO:0030091 - protein repair [Evidence IEA]; GO:0006979 - response to oxidative stress [Evidence IEA]
peptide-methionine (S)-S-oxide reductase MsrA
COORDINATES: protein motif:HMM:NF013866.2
COORDINATES: protein motif:HMM:NF024790.2
COORDINATES: protein motif:HMM:NF009410.0
COORDINATES: protein motif:HMM:NF014794.2
GO:0003824 - catalytic activity [Evidence IEA]; GO:0030976 - thiamine pyrophosphate binding [Evidence IEA]
COORDINATES: protein motif:HMM:NF013974.2
COORDINATES: protein motif:HMM:TIGR02175.1
GO:0016903 - oxidoreductase activity, acting on the aldehyde or oxo group of donors [Evidence IEA]
2-oxoacid:acceptor oxidoreductase family protein
COORDINATES: protein motif:HMM:TIGR00072.1
GO:0008233 - peptidase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011516268.1
COORDINATES: protein motif:HMM:NF024900.2
COORDINATES: protein motif:HMM:NF013662.2
NADH-ubiquinone oxidoreductase-F iron-sulfur binding region domain-containing protein
COORDINATES: protein motif:HMM:NF005057.0
GO:0005524 - ATP binding [Evidence IEA]; GO:0008986 - pyruvate, water dikinase activity [Evidence IEA]; GO:0016772 - transferase activity, transferring phosphorus-containing groups [Evidence IEA]
GO:0016310 - phosphorylation [Evidence IEA]; GO:0006090 - pyruvate metabolic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF006045.0
bifunctional enoyl-CoA hydratase/phosphate acetyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_017878477.1
COORDINATES: protein motif:HMM:NF015588.2
COORDINATES: protein motif:HMM:NF003621.0
COORDINATES: protein motif:HMM:NF024935.2
COORDINATES: protein motif:HMM:NF012496.2
GO:0004332 - fructose-bisphosphate aldolase activity [Evidence IEA]
GO:0006096 - glycolytic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF023283.2
COORDINATES: protein motif:HMM:NF025205.2
COORDINATES: protein motif:HMM:NF024947.2
COORDINATES: protein motif:HMM:NF023223.2
COORDINATES: similar to AA sequence:RefSeq:WP_013206063.1
COORDINATES: protein motif:HMM:NF024895.2
COORDINATES: protein motif:HMM:NF017011.2
COORDINATES: similar to AA sequence:RefSeq:WP_011803789.1
incomplete; partial in the middle of a contig; missing N-terminus and C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: protein motif:HMM:NF020419.2
nucleotidyl transferase AbiEii/AbiGii toxin family protein
COORDINATES: similar to AA sequence:RefSeq:WP_019921840.1
COORDINATES: protein motif:HMM:NF014567.2
HAMP domain-containing sensor histidine kinase
COORDINATES: protein motif:HMM:NF016268.2
COORDINATES: protein motif:HMM:NF023857.2
COORDINATES: protein motif:HMM:NF020265.2
COORDINATES: protein motif:HMM:NF019225.2
PEP-CTERM proteins occur, often in large numbers, in the proteomes of bacteria that also encode an exosortase, a predicted intramembrane cysteine proteinase. The presence of a PEP-CTERM domain at a protein's C-terminus predicts cleavage within the sorting domain, followed by covalent anchoring to some some component of the (usually Gram-negative) cell surface. Many PEP-CTERM proteins exhibit an unusual sequence composition that includes large numbers of potential glycosylation sites. Expression of one such protein has been shown restore the ability of a bacterium to form floc, a type of biofilm.; PEP-CTERM proteins occur, often in large numbers, in the proteomes of bacteria that also encode an exosortase, a predicted intramembrane cysteine proteinase. The presence of a PEP-CTERM domain at a protein's C-terminus predicts cleavage within the sorting domain, followed by covalent anchoring to some some component of the (usually Gram-negative) cell surface. Many PEP-CTERM proteins exhibit an unusual sequence composition that includes large numbers of potential glycosylation sites. Expression of one such protein has been shown restore the ability of a bacterium to form floc, a type of biofilm.; PEP-CTERM proteins occur, often in large numbers, in the proteomes of bacteria that also encode an exosortase, a predicted intramembrane cysteine proteinase. The presence of a PEP-CTERM domain at a protein's C-terminus predicts cleavage within the sorting domain, followed by covalent anchoring to some some component of the (usually Gram-negative) cell surface. Many PEP-CTERM proteins exhibit an unusual sequence composition that includes large numbers of potential glycosylation sites. Expression of one such protein has been shown restore the ability of a bacterium to form floc, a type of biofilm; Derived by automated computational analysis using gene prediction method: Protein Homology.
PEP-CTERM sorting domain-containing protein
COORDINATES: protein motif:HMM:NF018391.2
COORDINATES: protein motif:HMM:NF017085.2
COORDINATES: protein motif:HMM:NF033894.1
COORDINATES: similar to AA sequence:RefSeq:WP_019921908.1
COORDINATES: similar to AA sequence:RefSeq:WP_019921909.1
GO:0004781 - sulfate adenylyltransferase (ATP) activity [Evidence IEA]
GO:0019419 - sulfate reduction [Evidence IEA]
sulfate adenylyltransferase subunit CysD
COORDINATES: protein motif:HMM:NF002537.0
GO:0003824 - catalytic activity [Evidence IEA]; GO:0004604 - phosphoadenylyl-sulfate reductase (thioredoxin) activity [Evidence IEA]
GO:0019379 - sulfate assimilation, phosphoadenylyl sulfate reduction by phosphoadenylyl-sulfate reductase (thioredoxin) [Evidence IEA]
COORDINATES: protein motif:HMM:NF017849.2
COORDINATES: similar to AA sequence:RefSeq:WP_019921912.1
COORDINATES: protein motif:HMM:NF012699.2
GO:0006629 - lipid metabolic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF013117.2
COORDINATES: protein motif:HMM:NF013362.2
RsmB/NOP family class I SAM-dependent RNA methyltransferase
COORDINATES: protein motif:HMM:TIGR00639.1
GO:0004644 - phosphoribosylglycinamide formyltransferase activity [Evidence IEA]
GO:0009152 - purine ribonucleotide biosynthetic process [Evidence IEA]
phosphoribosylglycinamide formyltransferase
COORDINATES: protein motif:HMM:TIGR00878.1
GO:0004641 - phosphoribosylformylglycinamidine cyclo-ligase activity [Evidence IEA]
GO:0006189 - 'de novo' IMP biosynthetic process [Evidence IEA]; GO:0009152 - purine ribonucleotide biosynthetic process [Evidence IEA]
phosphoribosylformylglycinamidine cyclo-ligase
COORDINATES: protein motif:HMM:NF013740.2
COORDINATES: protein motif:HMM:NF012529.2
COORDINATES: protein motif:HMM:TIGR01490.1
COORDINATES: protein motif:HMM:TIGR01942.1
GO:0004652 - polynucleotide adenylyltransferase activity [Evidence IEA]; GO:0003723 - RNA binding [Evidence IEA]
GO:0006378 - mRNA polyadenylation [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR01498.1
GO:0003848 - 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase activity [Evidence IEA]
GO:0009396 - folic acid-containing compound biosynthetic process [Evidence IEA]
2-amino-4-hydroxy-6- hydroxymethyldihydropteridine diphosphokinase
COORDINATES: protein motif:HMM:TIGR00018.1
GO:0004592 - pantoate-beta-alanine ligase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_019921700.1
GO:0004813 - alanine-tRNA ligase activity [Evidence IEA]
GO:0006419 - alanyl-tRNA aminoacylation [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR01216.1
GO:0000275 - mitochondrial proton-transporting ATP synthase complex, catalytic sector F(1) [Evidence IEA]; GO:0045262 - plasma membrane proton-transporting ATP synthase complex, catalytic core F(1) [Evidence IEA]; GO:0045261 - proton-transporting ATP synthase complex, catalytic core F(1) [Evidence IEA]
GO:0046933 - proton-transporting ATP synthase activity, rotational mechanism [Evidence IEA]
GO:0015986 - proton motive force-driven ATP synthesis [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR01146.1
COORDINATES: protein motif:HMM:NF013067.2
COORDINATES: protein motif:HMM:NF020921.2
COORDINATES: similar to AA sequence:RefSeq:WP_018986135.1
GO:0009368 - endopeptidase Clp complex [Evidence IEA]
GO:0004176 - ATP-dependent peptidase activity [Evidence IEA]
GO:0043335 - protein unfolding [Evidence IEA]; GO:0006508 - proteolysis [Evidence IEA]
ATP-dependent Clp protease ATP-binding subunit ClpA
COORDINATES: protein motif:HMM:NF000672.0
COORDINATES: similar to AA sequence:RefSeq:WP_006478030.1
COORDINATES: protein motif:HMM:NF004837.0
COORDINATES: protein motif:HMM:NF002341.0
GO:0004057 - arginyltransferase activity [Evidence IEA]
GO:0016598 - protein arginylation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_019922900.1
GO:0004152 - dihydroorotate dehydrogenase activity [Evidence IEA]
GO:0006222 - UMP biosynthetic process [Evidence IEA]
quinone-dependent dihydroorotate dehydrogenase
COORDINATES: protein motif:HMM:TIGR01944.1
GO:0022900 - electron transport chain [Evidence IEA]
RnfABCDGE type electron transport complex subunit B
COORDINATES: similar to AA sequence:RefSeq:WP_019921561.1
GO:0003906 - DNA-(apurinic or apyrimidinic site) endonuclease activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF020471.2
COORDINATES: protein motif:HMM:NF004316.1
GO:0003677 - DNA binding [Evidence IEA]; GO:0003887 - DNA-directed DNA polymerase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_018985268.1
GO:0003676 - nucleic acid binding [Evidence IEA]; GO:0004523 - RNA-DNA hybrid ribonuclease activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF019846.2
GO:0008168 - methyltransferase activity [Evidence IEA]
methyltransferase domain-containing protein
COORDINATES: protein motif:HMM:TIGR03413.1
GO:0004416 - hydroxyacylglutathione hydrolase activity [Evidence IEA]
GO:0019243 - methylglyoxal catabolic process to D-lactate via S-lactoyl-glutathione [Evidence IEA]
transglycosylase SLT domain-containing protein
COORDINATES: protein motif:HMM:NF008453.0
COORDINATES: protein motif:HMM:NF012738.2
COORDINATES: similar to AA sequence:RefSeq:WP_000881920.1
COORDINATES: protein motif:HMM:NF012706.2
ABC transporter substrate-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_019882254.1
COORDINATES: protein motif:HMM:NF025010.2
SurA N-terminal domain-containing protein
COORDINATES: protein motif:HMM:NF014670.2
COORDINATES: protein motif:HMM:NF024753.2
PQQ-binding-like beta-propeller repeat protein
COORDINATES: similar to AA sequence:RefSeq:WP_016535194.1
COORDINATES: similar to AA sequence:RefSeq:WP_018985282.1
GO:0016887 - ATP hydrolysis activity [Evidence IEA]; GO:0004176 - ATP-dependent peptidase activity [Evidence IEA]; GO:0043565 - sequence-specific DNA binding [Evidence IEA]; GO:0004252 - serine-type endopeptidase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_018985283.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0016887 - ATP hydrolysis activity [Evidence IEA]; GO:0046983 - protein dimerization activity [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA]
ATP-dependent Clp protease ATP-binding subunit ClpX
COORDINATES: similar to AA sequence:RefSeq:WP_020061713.1
GO:0004176 - ATP-dependent peptidase activity [Evidence IEA]; GO:0004252 - serine-type endopeptidase activity [Evidence IEA]
ATP-dependent Clp endopeptidase proteolytic subunit ClpP
COORDINATES: protein motif:HMM:TIGR00115.1
GO:0005854 - nascent polypeptide-associated complex [Evidence IEA]
GO:0003755 - peptidyl-prolyl cis-trans isomerase activity [Evidence IEA]; GO:0051082 - unfolded protein binding [Evidence IEA]
GO:0051083 - 'de novo' cotranslational protein folding [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00066.1
GO:0006750 - glutathione biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00473.1
GO:0003882 - CDP-diacylglycerol-serine O-phosphatidyltransferase activity [Evidence IEA]
CDP-diacylglycerol--serine O-phosphatidyltransferase
COORDINATES: protein motif:HMM:NF003680.0
COORDINATES: similar to AA sequence:RefSeq:WP_003261913.1
COORDINATES: similar to AA sequence:RefSeq:WP_018987330.1
GO:1990610 - acetolactate synthase regulator activity [Evidence IEA]
GO:0009082 - branched-chain amino acid biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF005409.0
GO:0003984 - acetolactate synthase activity [Evidence IEA]
acetolactate synthase 3 catalytic subunit
COORDINATES: protein motif:HMM:TIGR02120.1
GO:0015627 - type II protein secretion system complex [Evidence IEA]
GO:0015628 - protein secretion by the type II secretion system [Evidence IEA]
type II secretion system inner membrane protein GspF
COORDINATES: similar to AA sequence:RefSeq:WP_019924715.1
COORDINATES: protein motif:HMM:TIGR02517.1
COORDINATES: protein motif:HMM:NF013376.2
COORDINATES: protein motif:HMM:NF016493.2
COORDINATES: protein motif:HMM:TIGR01709.2
COORDINATES: protein motif:HMM:NF037980.1
GO:0009306 - protein secretion [Evidence IEA]
type II secretion system minor pseudopilin GspK
prepilin-type N-terminal cleavage/methylation domain-containing protein
COORDINATES: protein motif:HMM:TIGR01707.1
type II secretion system minor pseudopilin GspI
COORDINATES: similar to AA sequence:RefSeq:WP_006751354.1
type II secretion system major pseudopilin GspG
COORDINATES: protein motif:HMM:NF022800.2
COORDINATES: protein motif:HMM:NF019403.2
heparan-alpha-glucosaminide N-acetyltransferase
COORDINATES: protein motif:HMM:NF019604.2
COORDINATES: protein motif:HMM:NF014672.2
COORDINATES: protein motif:HMM:NF008101.0
GO:0005524 - ATP binding [Evidence IEA]; GO:0016874 - ligase activity [Evidence IEA]; GO:0004326 - tetrahydrofolylpolyglutamate synthase activity [Evidence IEA]
bifunctional tetrahydrofolate synthase/dihydrofolate synthase
COORDINATES: similar to AA sequence:RefSeq:WP_019924622.1
COORDINATES: similar to AA sequence:RefSeq:WP_012584765.1
aminotransferase class V-fold PLP-dependent enzyme
COORDINATES: similar to AA sequence:RefSeq:WP_019919917.1
COORDINATES: similar to AA sequence:RefSeq:WP_018985876.1
COORDINATES: similar to AA sequence:RefSeq:WP_018287377.1
COORDINATES: protein motif:HMM:NF015297.2
COORDINATES: protein motif:HMM:TIGR00521.1
GO:0004632 - phosphopantothenate--cysteine ligase activity [Evidence IEA]; GO:0004633 - phosphopantothenoylcysteine decarboxylase activity [Evidence IEA]
GO:0015937 - coenzyme A biosynthetic process [Evidence IEA]; GO:0015939 - pantothenate metabolic process [Evidence IEA]
bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase CoaBC
COORDINATES: similar to AA sequence:RefSeq:WP_000976070.1
GO:0004170 - dUTP diphosphatase activity [Evidence IEA]; GO:0000287 - magnesium ion binding [Evidence IEA]
GO:0006226 - dUMP biosynthetic process [Evidence IEA]; GO:0046081 - dUTP catabolic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF014016.2
CbiX/SirB N-terminal domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_012696028.1
COORDINATES: similar to AA sequence:RefSeq:WP_004631999.1
GO:0022625 - cytosolic large ribosomal subunit [Evidence IEA]; GO:0000311 - plastid large ribosomal subunit [Evidence IEA]
COORDINATES: protein motif:HMM:NF014731.2
COORDINATES: similar to AA sequence:RefSeq:WP_076612082.1
integrase core domain-containing protein
type ISP restriction/modification enzyme
COORDINATES: protein motif:HMM:NF024685.2
internal stop; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_086557966.1
COORDINATES: protein motif:HMM:NF024547.2
COORDINATES: protein motif:HMM:NF013930.2
GO:0003677 - DNA binding [Evidence IEA]; GO:0003896 - DNA primase activity [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA]
CHC2 zinc finger domain-containing protein
COORDINATES: protein motif:HMM:NF005155.0
GO:0004072 - aspartate kinase activity [Evidence IEA]
GO:0009089 - lysine biosynthetic process via diaminopimelate [Evidence IEA]
COORDINATES: protein motif:HMM:NF037100.2
nucleotidyltransferase domain-containing protein
COORDINATES: protein motif:HMM:NF017020.2
COORDINATES: protein motif:HMM:NF018933.2
COORDINATES: protein motif:HMM:NF024491.2
COORDINATES: protein motif:HMM:NF027681.2
COORDINATES: protein motif:HMM:NF013594.2
GO:0004222 - metalloendopeptidase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF004349.1
GO:0004812 - aminoacyl-tRNA ligase activity [Evidence IEA]; GO:0005524 - ATP binding [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]; GO:0004832 - valine-tRNA ligase activity [Evidence IEA]
GO:0006438 - valyl-tRNA aminoacylation [Evidence IEA]
COORDINATES: protein motif:HMM:NF016267.2
COORDINATES: protein motif:HMM:NF002074.0
GO:0070006 - metalloaminopeptidase activity [Evidence IEA]
GO:0019538 - protein metabolic process [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR04407.1
GO:0015221 - lipopolysaccharide transmembrane transporter activity [Evidence IEA]
GO:0015920 - lipopolysaccharide transport [Evidence IEA]
LPS export ABC transporter permease LptF
COORDINATES: similar to AA sequence:RefSeq:WP_008814576.1
GO:0045250 - cytosolic pyruvate dehydrogenase complex [Evidence IEA]
GO:0004738 - pyruvate dehydrogenase activity [Evidence IEA]
GO:0006086 - acetyl-CoA biosynthetic process from pyruvate [Evidence IEA]
pyruvate dehydrogenase (acetyl-transferring), homodimeric type
COORDINATES: protein motif:HMM:NF024910.2
GO:0016810 - hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00711.1
GO:0009410 - response to xenobiotic stimulus [Evidence IEA]; GO:0006855 - xenobiotic transmembrane transport [Evidence IEA]
DHA2 family efflux MFS transporter permease subunit
GO:0051287 - NAD binding [Evidence IEA]; GO:0016616 - oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor [Evidence IEA]; GO:0003979 - UDP-glucose 6-dehydrogenase activity [Evidence IEA]
GO:0000271 - polysaccharide biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_016292024.1
COORDINATES: protein motif:HMM:TIGR03099.1
pyridoxal-dependent decarboxylase, exosortase A system-associated
COORDINATES: protein motif:HMM:NF012936.2
COORDINATES: similar to AA sequence:RefSeq:WP_003450988.1
COORDINATES: protein motif:HMM:NF012739.2
COORDINATES: similar to AA sequence:RefSeq:WP_019919929.1
COORDINATES: protein motif:HMM:NF012695.2
GO:0016779 - nucleotidyltransferase activity [Evidence IEA]
GO:0009058 - biosynthetic process [Evidence IEA]
COORDINATES: nucleotide motif:Rfam:14.4:RF00001
COORDINATES: nucleotide motif:Rfam:14.4:RF02541
COORDINATES: nucleotide motif:Rfam:14.4:RF00177
COORDINATES: protein motif:HMM:NF023125.2
COORDINATES: similar to AA sequence:RefSeq:WP_014003887.1
COORDINATES: similar to AA sequence:RefSeq:WP_019920136.1
COORDINATES: protein motif:HMM:NF018637.2
arsenite efflux transporter metallochaperone ArsD
COORDINATES: similar to AA sequence:RefSeq:WP_008643205.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0016887 - ATP hydrolysis activity [Evidence IEA]; GO:0015446 - ATPase-coupled arsenite transmembrane transporter activity [Evidence IEA]
GO:0071722 - detoxification of arsenic-containing substance [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011871431.1
GO:0008490 - arsenite secondary active transmembrane transporter activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF024934.2
Crp/Fnr family transcriptional regulator
COORDINATES: protein motif:HMM:NF017970.2
COORDINATES: similar to AA sequence:RefSeq:WP_019920767.1
COORDINATES: protein motif:HMM:NF025180.2
COORDINATES: protein motif:HMM:NF033564.0
COORDINATES: protein motif:HMM:NF023742.2
COORDINATES: protein motif:HMM:NF040570.1
COORDINATES: protein motif:HMM:NF013895.2
GO:0006812 - monoatomic cation transport [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR03709.1
COORDINATES: protein motif:HMM:NF012894.2
COORDINATES: similar to AA sequence:RefSeq:WP_019921964.1
COORDINATES: protein motif:HMM:NF012264.2
COORDINATES: protein motif:HMM:NF011077.0
COORDINATES: protein motif:HMM:TIGR02402.1
GO:0016798 - hydrolase activity, acting on glycosyl bonds [Evidence IEA]
GO:0005992 - trehalose biosynthetic process [Evidence IEA]
malto-oligosyltrehalose trehalohydrolase
COORDINATES: protein motif:HMM:TIGR02100.1
GO:0004133 - glycogen debranching enzyme activity [Evidence IEA]
GO:0005980 - glycogen catabolic process [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR02456.1
GO:0047471 - maltose alpha-D-glucosyltransferase activity [Evidence IEA]
GO:0005991 - trehalose metabolic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF023324.2
alpha-1,4-glucan--maltose-1-phosphate maltosyltransferase
COORDINATES: protein motif:HMM:NF016836.2
COORDINATES: protein motif:HMM:NF016830.2
GO:0008643 - carbohydrate transport [Evidence IEA]
COORDINATES: protein motif:HMM:NF025019.2
COORDINATES: similar to AA sequence:RefSeq:WP_018985782.1
COORDINATES: protein motif:HMM:TIGR00472.1
GO:0009328 - phenylalanine-tRNA ligase complex [Evidence IEA]
GO:0004826 - phenylalanine-tRNA ligase activity [Evidence IEA]
GO:0006432 - phenylalanyl-tRNA aminoacylation [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00468.1
phenylalanine--tRNA ligase subunit alpha
COORDINATES: similar to AA sequence:RefSeq:WP_004192938.1
GO:0019843 - rRNA binding [Evidence IEA]; GO:0003735 - structural constituent of ribosome [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_006163215.1
COORDINATES: similar to AA sequence:RefSeq:WP_012607480.1
COORDINATES: protein motif:HMM:TIGR00418.1
GO:0004829 - threonine-tRNA ligase activity [Evidence IEA]
GO:0006435 - threonyl-tRNA aminoacylation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_018985457.1
GO:0005525 - GTP binding [Evidence IEA]; GO:0003924 - GTPase activity [Evidence IEA]; GO:0043022 - ribosome binding [Evidence IEA]
GO:0042254 - ribosome biogenesis [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR03300.1
outer membrane protein assembly factor BamB
COORDINATES: protein motif:HMM:NF021492.2
COORDINATES: similar to AA sequence:RefSeq:WP_010257545.1
GO:0004821 - histidine-tRNA ligase activity [Evidence IEA]
GO:0006427 - histidyl-tRNA aminoacylation [Evidence IEA]
COORDINATES: protein motif:HMM:NF001540.0
GO:0046429 - 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase activity [Evidence IEA]
GO:0044237 - cellular metabolic process [Evidence IEA]
flavodoxin-dependent (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase
COORDINATES: protein motif:HMM:NF024252.2
COORDINATES: protein motif:HMM:TIGR00048.1
GO:0016433 - rRNA (adenine) methyltransferase activity [Evidence IEA]; GO:0008757 - S-adenosylmethionine-dependent methyltransferase activity [Evidence IEA]
GO:0031167 - rRNA methylation [Evidence IEA]
23S rRNA (adenine(2503)-C(2))-methyltransferase RlmN
COORDINATES: similar to AA sequence:RefSeq:WP_012316140.1
GO:0004550 - nucleoside diphosphate kinase activity [Evidence IEA]
GO:0006165 - nucleoside diphosphate phosphorylation [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR02432.1
GO:0016879 - ligase activity, forming carbon-nitrogen bonds [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00513.1
GO:0009317 - acetyl-CoA carboxylase complex [Evidence IEA]
GO:0003989 - acetyl-CoA carboxylase activity [Evidence IEA]
acetyl-CoA carboxylase carboxyltransferase subunit alpha
COORDINATES: protein motif:HMM:NF025595.2
COORDINATES: protein motif:HMM:NF009395.0
GO:0003849 - 3-deoxy-7-phosphoheptulonate synthase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_020705232.1
GO:0008237 - metallopeptidase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF012993.2
carbon-nitrogen hydrolase family protein
COORDINATES: protein motif:HMM:NF024516.2
COORDINATES: protein motif:HMM:NF005146.0
GO:0004084 - branched-chain-amino-acid transaminase activity [Evidence IEA]
GO:0009081 - branched-chain amino acid metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013213418.1
COORDINATES: protein motif:HMM:TIGR02195.1
GO:0008920 - lipopolysaccharide heptosyltransferase activity [Evidence IEA]
lipopolysaccharide heptosyltransferase II
COORDINATES: protein motif:HMM:NF016491.2
GO:0030255 - protein secretion by the type IV secretion system [Evidence IEA]
COORDINATES: protein motif:HMM:NF040179.1
COORDINATES: protein motif:HMM:NF016957.2
VirB3 family type IV secretion system protein
COORDINATES: protein motif:HMM:NF012652.2
COORDINATES: protein motif:HMM:TIGR00492.1
GO:0008784 - alanine racemase activity [Evidence IEA]
GO:0009252 - peptidoglycan biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF012770.2
COORDINATES: similar to AA sequence:RefSeq:WP_019921351.1
signal recognition particle sRNA small type
COORDINATES: nucleotide motif:Rfam:14.4:RF00169
COORDINATES: protein motif:HMM:NF020965.2
COORDINATES: protein motif:HMM:TIGR02397.1
COORDINATES: protein motif:HMM:TIGR00103.1
YbaB/EbfC family nucleoid-associated protein
COORDINATES: similar to AA sequence:RefSeq:WP_019922568.1
COORDINATES: similar to AA sequence:RefSeq:WP_019922045.1
GO:0004828 - serine-tRNA ligase activity [Evidence IEA]
GO:0006434 - seryl-tRNA aminoacylation [Evidence IEA]
COORDINATES: protein motif:HMM:NF008112.0
GO:0008933 - lytic transglycosylase activity [Evidence IEA]
GO:0000270 - peptidoglycan metabolic process [Evidence IEA]
membrane-bound lytic murein transglycosylase MltF
COORDINATES: protein motif:HMM:NF013308.2
GO:0050518 - 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase activity [Evidence IEA]
GO:0019288 - isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway [Evidence IEA]
2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_019920315.1
GO:0008685 - 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase activity [Evidence IEA]
2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase
COORDINATES: protein motif:HMM:NF001591.0
GO:0003935 - GTP cyclohydrolase II activity [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR03717.1
GO:0003674 - molecular_function [Evidence IEA]
Members of this highly hydrophobic protein family,regularly are found preceded by the yybP-ykoY manganese riboswitch (see RF00080). A metal cation transport function is proposed.; Members of this highly hydrophobic protein family,regularly are found preceded by the yybP-ykoY manganese riboswitch (see RF00080). A metal cation transport function is proposed; Derived by automated computational analysis using gene prediction method: Protein Homology.
YjbE family putative metal transport protein
COORDINATES: similar to AA sequence:RefSeq:WP_019920337.1
COORDINATES: protein motif:HMM:NF016248.2
GO:0008813 - chorismate lyase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_019922811.1
COORDINATES: protein motif:HMM:NF017197.2
COORDINATES: protein motif:HMM:NF014608.2
COORDINATES: similar to AA sequence:RefSeq:WP_009873354.1
type II toxin-antitoxin system PemK/MazF family toxin
COORDINATES: protein motif:HMM:NF022894.2
type II toxin-antitoxin system prevent-host-death family antitoxin
COORDINATES: protein motif:HMM:NF014740.2
nucleoside-diphosphate sugar epimerase/dehydratase
COORDINATES: protein motif:HMM:NF014051.2
COORDINATES: protein motif:HMM:NF024880.2
COORDINATES: protein motif:HMM:NF025025.2
COORDINATES: protein motif:HMM:NF013540.2
COORDINATES: protein motif:HMM:NF018050.2
COORDINATES: similar to AA sequence:RefSeq:WP_015256992.1
COORDINATES: similar to AA sequence:RefSeq:WP_006406735.1
COORDINATES: similar to AA sequence:RefSeq:WP_003158906.1
COORDINATES: similar to AA sequence:RefSeq:WP_015913623.1
COORDINATES: similar to AA sequence:RefSeq:WP_012427050.1
COORDINATES: similar to AA sequence:RefSeq:WP_011291581.1
COORDINATES: protein motif:HMM:NF040107.1
COORDINATES: protein motif:HMM:NF025314.2
COORDINATES: protein motif:HMM:NF013245.2
COORDINATES: protein motif:HMM:NF015983.2
radical SAM/SPASM domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_019923825.1
GO:0008446 - GDP-mannose 4,6-dehydratase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF012257.2
COORDINATES: similar to AA sequence:RefSeq:WP_012368599.1
COORDINATES: protein motif:HMM:TIGR01844.1
COORDINATES: protein motif:HMM:TIGR01843.1
GO:0030253 - protein secretion by the type I secretion system [Evidence IEA]
HlyD family type I secretion periplasmic adaptor subunit
COORDINATES: similar to AA sequence:RefSeq:WP_019924797.1
COORDINATES: protein motif:HMM:NF028126.2
Members of this family include DotD of type IVB secretion systems and TraH of plasmid conjugative plasmid systems, both lipoproteins.; Members of this family include DotD of type IVB secretion systems and TraH of plasmid conjugative plasmid systems, both lipoproteins; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: protein motif:HMM:NF024861.2
COORDINATES: protein motif:HMM:NF025120.2
COORDINATES: protein motif:HMM:NF012861.2
GO:0005247 - voltage-gated chloride channel activity [Evidence IEA]
GO:0006821 - chloride transport [Evidence IEA]; GO:0055085 - transmembrane transport [Evidence IEA]
COORDINATES: protein motif:HMM:NF001221.0
GO:0004350 - glutamate-5-semialdehyde dehydrogenase activity [Evidence IEA]; GO:0016620 - oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor [Evidence IEA]
GO:0006561 - proline biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF000840.1
nicotinate-nucleotide adenylyltransferase
COORDINATES: protein motif:HMM:TIGR00090.1
GO:0043022 - ribosome binding [Evidence IEA]
GO:0017148 - negative regulation of translation [Evidence IEA]
COORDINATES: protein motif:HMM:NF014629.2
GO:0006364 - rRNA processing [Evidence IEA]
23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH
COORDINATES: protein motif:HMM:NF008689.0
GO:0004540 - ribonuclease activity [Evidence IEA]; GO:0003723 - RNA binding [Evidence IEA]
COORDINATES: protein motif:HMM:NF014389.2
COORDINATES: protein motif:HMM:TIGR00112.1
GO:0004735 - pyrroline-5-carboxylate reductase activity [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00044.1
GO:0030170 - pyridoxal phosphate binding [Evidence IEA]
YggS family pyridoxal phosphate-dependent enzyme
COORDINATES: protein motif:HMM:NF017922.2
COORDINATES: similar to AA sequence:RefSeq:WP_007704556.1
bifunctional demethylmenaquinone methyltransferase/2-methoxy-6-polyprenyl-1,4-benzoquinol methylase UbiE
SCP2 sterol-binding domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_008807933.1
ubiquinone biosynthesis regulatory protein kinase UbiB
COORDINATES: protein motif:HMM:NF012360.2
COORDINATES: similar to AA sequence:RefSeq:WP_019924488.1
COORDINATES: protein motif:HMM:NF015608.2
COORDINATES: protein motif:HMM:NF013347.2
COORDINATES: similar to AA sequence:RefSeq:WP_000091118.1
GO:0003700 - DNA-binding transcription factor activity [Evidence IEA]; GO:0000156 - phosphorelay response regulator activity [Evidence IEA]
GO:0006796 - phosphate-containing compound metabolic process [Evidence IEA]; GO:0000160 - phosphorelay signal transduction system [Evidence IEA]; GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
phosphate regulon transcriptional regulator PhoB
COORDINATES: protein motif:HMM:TIGR02966.1
GO:0006796 - phosphate-containing compound metabolic process [Evidence IEA]; GO:0000160 - phosphorelay signal transduction system [Evidence IEA]
phosphate regulon sensor histidine kinase PhoR
COORDINATES: similar to AA sequence:RefSeq:WP_018986886.1
COORDINATES: similar to AA sequence:RefSeq:WP_019924463.1
GO:0008965 - phosphoenolpyruvate-protein phosphotransferase activity [Evidence IEA]
GO:0009401 - phosphoenolpyruvate-dependent sugar phosphotransferase system [Evidence IEA]; GO:0006808 - regulation of nitrogen utilization [Evidence IEA]
phosphoenolpyruvate--protein phosphotransferase
COORDINATES: similar to AA sequence:RefSeq:WP_012836741.1
GO:0004588 - orotate phosphoribosyltransferase activity [Evidence IEA]
GO:0009220 - pyrimidine ribonucleotide biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR02081.1
GO:0009086 - methionine biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_018987250.1
GO:0016747 - acyltransferase activity, transferring groups other than amino-acyl groups [Evidence IEA]
COORDINATES: protein motif:HMM:NF004015.0
GO:0016884 - carbon-nitrogen ligase activity, with glutamine as amido-N-donor [Evidence IEA]
Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatB
COORDINATES: similar to AA sequence:RefSeq:WP_019924448.1
GO:0030956 - glutamyl-tRNA(Gln) amidotransferase complex [Evidence IEA]
GO:0050567 - glutaminyl-tRNA synthase (glutamine-hydrolyzing) activity [Evidence IEA]
GO:0006424 - glutamyl-tRNA aminoacylation [Evidence IEA]
Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatA
COORDINATES: protein motif:HMM:TIGR00135.1
Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatC
COORDINATES: similar to AA sequence:RefSeq:NP_462284.1
COORDINATES: protein motif:HMM:TIGR00219.1
GO:0008360 - regulation of cell shape [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR03426.1
COORDINATES: protein motif:HMM:TIGR03423.1
COORDINATES: similar to AA sequence:RefSeq:WP_018985376.1
COORDINATES: protein motif:HMM:NF015298.2
septal ring lytic transglycosylase RlpA family protein
COORDINATES: similar to AA sequence:RefSeq:WP_012904980.1
GO:0051539 - 4 iron, 4 sulfur cluster binding [Evidence IEA]; GO:0016992 - lipoate synthase activity [Evidence IEA]; GO:1904047 - S-adenosyl-L-methionine binding [Evidence IEA]
GO:0009107 - lipoate biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF010922.0
GO:0033819 - lipoyl(octanoyl) transferase activity [Evidence IEA]
GO:0009249 - protein lipoylation [Evidence IEA]
COORDINATES: protein motif:HMM:NF016262.2
COORDINATES: protein motif:HMM:NF013247.2
D-alanyl-D-alanine carboxypeptidase family protein
COORDINATES: protein motif:HMM:NF012337.2
beta-ketoacyl-[acyl-carrier-protein] synthase family protein
COORDINATES: protein motif:HMM:NF012759.2
COORDINATES: protein motif:HMM:NF023568.2
COORDINATES: similar to AA sequence:RefSeq:WP_019469841.1
COORDINATES: protein motif:HMM:NF013368.2
GO:0004045 - aminoacyl-tRNA hydrolase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF004130.0
GO:0008097 - 5S rRNA binding [Evidence IEA]; GO:0003735 - structural constituent of ribosome [Evidence IEA]
50S ribosomal protein L25/general stress protein Ctc
COORDINATES: similar to AA sequence:RefSeq:WP_016426512.1
COORDINATES: similar to AA sequence:RefSeq:WP_019923429.1
GO:0050515 - 4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase activity [Evidence IEA]
GO:0016114 - terpenoid biosynthetic process [Evidence IEA]
4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase
COORDINATES: protein motif:HMM:TIGR00548.1
GO:0008320 - protein transmembrane transporter activity [Evidence IEA]
lipoprotein insertase outer membrane protein LolB
COORDINATES: protein motif:HMM:NF024824.2
COORDINATES: similar to AA sequence:RefSeq:WP_018985897.1
COORDINATES: similar to AA sequence:RefSeq:WP_018985898.1
GO:0004595 - pantetheine-phosphate adenylyltransferase activity [Evidence IEA]
GO:0015937 - coenzyme A biosynthetic process [Evidence IEA]
pantetheine-phosphate adenylyltransferase
COORDINATES: protein motif:HMM:TIGR00095.1
GO:0052913 - 16S rRNA (guanine(966)-N(2))-methyltransferase activity [Evidence IEA]
16S rRNA (guanine(966)-N(2))-methyltransferase RsmD
COORDINATES: protein motif:HMM:TIGR00064.1
GO:0003924 - GTPase activity [Evidence IEA]; GO:0005047 - signal recognition particle binding [Evidence IEA]
signal recognition particle-docking protein FtsY
COORDINATES: protein motif:HMM:NF037183.2
permease-like cell division protein FtsX
COORDINATES: similar to AA sequence:RefSeq:WP_012537367.1
GO:0006352 - DNA-templated transcription initiation [Evidence IEA]
COORDINATES: protein motif:HMM:NF003656.0
COORDINATES: protein motif:HMM:TIGR00152.1
GO:0004140 - dephospho-CoA kinase activity [Evidence IEA]
Dephospho-CoA kinase (CoaE) performs the final step in coenzyme A biosynthesis; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: protein motif:HMM:NF013632.2
COORDINATES: protein motif:HMM:NF013741.2
COORDINATES: protein motif:HMM:NF013725.2
GO:0020037 - heme binding [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00959.1
GO:0048501 - signal recognition particle, plasma membrane targeting [Evidence IEA]
GO:0003924 - GTPase activity [Evidence IEA]; GO:0005048 - signal sequence binding [Evidence IEA]
COORDINATES: protein motif:HMM:NF015378.2
COORDINATES: protein motif:HMM:NF016843.2
COORDINATES: protein motif:HMM:NF015500.2
COORDINATES: protein motif:HMM:NF028243.2
COORDINATES: protein motif:HMM:NF038011.1
GO:0016757 - glycosyltransferase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF028273.2
COORDINATES: protein motif:HMM:NF024821.2
COORDINATES: similar to AA sequence:RefSeq:WP_019921854.1
GO:0003978 - UDP-glucose 4-epimerase activity [Evidence IEA]
GO:0006012 - galactose metabolic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF015597.2
COORDINATES: similar to AA sequence:RefSeq:WP_019923872.1
GO:0004049 - anthranilate synthase activity [Evidence IEA]
GO:0000162 - tryptophan biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF004076.0
GO:0004750 - D-ribulose-phosphate 3-epimerase activity [Evidence IEA]
GO:0006098 - pentose-phosphate shunt [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_019923877.1
COORDINATES: protein motif:HMM:TIGR01035.1
GO:0008883 - glutamyl-tRNA reductase activity [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00019.1
GO:0016149 - translation release factor activity, codon specific [Evidence IEA]
GO:0006415 - translational termination [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00536.1
GO:0008757 - S-adenosylmethionine-dependent methyltransferase activity [Evidence IEA]
GO:0018364 - peptidyl-glutamine methylation [Evidence IEA]; GO:0006412 - translation [Evidence IEA]
peptide chain release factor N(5)-glutamine methyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_012207276.1
GO:0009055 - electron transfer activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF014336.2
GO:0004519 - endonuclease activity [Evidence IEA]; GO:0003676 - nucleic acid binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013358747.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0008134 - transcription factor binding [Evidence IEA]
sigma 54-interacting transcriptional regulator
COORDINATES: protein motif:HMM:NF003958.0
glucans biosynthesis glucosyltransferase MdoH
EAL domain-containing response regulator
COORDINATES: protein motif:HMM:NF017077.2
COORDINATES: protein motif:HMM:NF018302.2
COORDINATES: protein motif:HMM:TIGR01574.1
GO:0051539 - 4 iron, 4 sulfur cluster binding [Evidence IEA]; GO:1904047 - S-adenosyl-L-methionine binding [Evidence IEA]; GO:0016782 - transferase activity, transferring sulphur-containing groups [Evidence IEA]
tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB
COORDINATES: similar to AA sequence:RefSeq:WP_019921363.1
COORDINATES: protein motif:HMM:TIGR00043.2
GO:0046872 - metal ion binding [Evidence IEA]; GO:0004540 - ribonuclease activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_019921361.1
transporter associated domain-containing protein
COORDINATES: protein motif:HMM:TIGR00546.1
GO:0016410 - N-acyltransferase activity [Evidence IEA]
GO:0042158 - lipoprotein biosynthetic process [Evidence IEA]; GO:0006497 - protein lipidation [Evidence IEA]
COORDINATES: protein motif:HMM:NF014639.2
COORDINATES: similar to AA sequence:RefSeq:WP_014896110.1
GO:0009345 - glycine-tRNA ligase complex [Evidence IEA]
GO:0004820 - glycine-tRNA ligase activity [Evidence IEA]
GO:0006426 - glycyl-tRNA aminoacylation [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00211.2
COORDINATES: similar to AA sequence:RefSeq:WP_018987671.1
GO:0016791 - phosphatase activity [Evidence IEA]
D-glycero-beta-D-manno-heptose 1,7-bisphosphate 7-phosphatase
COORDINATES: protein motif:HMM:NF013702.2
lysophospholipid acyltransferase family protein
COORDINATES: protein motif:HMM:NF024629.2
COORDINATES: protein motif:HMM:NF013718.2
COORDINATES: protein motif:HMM:NF007756.0
GO:0004089 - carbonate dehydratase activity [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA]
GO:0015976 - carbon utilization [Evidence IEA]
COORDINATES: protein motif:HMM:NF002211.1
GO:0003684 - damaged DNA binding [Evidence IEA]; GO:0019104 - DNA N-glycosylase activity [Evidence IEA]; GO:0003906 - DNA-(apurinic or apyrimidinic site) endonuclease activity [Evidence IEA]; GO:0016799 - hydrolase activity, hydrolyzing N-glycosyl compounds [Evidence IEA]; GO:0003676 - nucleic acid binding [Evidence IEA]; GO:0008534 - oxidized purine nucleobase lesion DNA N-glycosylase activity [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA]
GO:0006284 - base-excision repair [Evidence IEA]; GO:0006281 - DNA repair [Evidence IEA]
bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase
COORDINATES: protein motif:HMM:TIGR00697.1
GO:1990397 - queuosine salvage [Evidence IEA]
COORDINATES: protein motif:HMM:NF000658.1
COORDINATES: protein motif:HMM:NF020917.2
GO:0043231 - intracellular membrane-bounded organelle [Evidence IEA]
GO:0051537 - 2 iron, 2 sulfur cluster binding [Evidence IEA]
CDGSH iron-sulfur domain-containing protein
COORDINATES: protein motif:HMM:NF002490.0
COORDINATES: protein motif:HMM:NF022072.2
type II toxin-antitoxin system RatA family toxin
COORDINATES: protein motif:HMM:NF003843.0
COORDINATES: similar to AA sequence:RefSeq:WP_019921880.1
GO:0004450 - isocitrate dehydrogenase (NADP+) activity [Evidence IEA]; GO:0000287 - magnesium ion binding [Evidence IEA]; GO:0051287 - NAD binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_019923647.1
GO:0016783 - sulfurtransferase activity [Evidence IEA]; GO:0016740 - transferase activity [Evidence IEA]
GO:0008033 - tRNA processing [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_008452901.1
GO:0004018 - N6-(1,2-dicarboxyethyl)AMP AMP-lyase (fumarate-forming) activity [Evidence IEA]
GO:0006188 - IMP biosynthetic process [Evidence IEA]; GO:0009152 - purine ribonucleotide biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF012372.2
GO:0003886 - DNA (cytosine-5-)-methyltransferase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF014045.2
COORDINATES: protein motif:HMM:NF014816.2
glutathione S-transferase N-terminal domain-containing protein
COORDINATES: protein motif:HMM:NF020893.2
COORDINATES: similar to AA sequence:RefSeq:WP_019923585.1
GO:0031522 - cell envelope Sec protein transport complex [Evidence IEA]
GO:0015450 - protein-transporting ATPase activity [Evidence IEA]
GO:0043952 - protein transport by the Sec complex [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_019923584.1
COORDINATES: protein motif:HMM:TIGR00739.1
COORDINATES: protein motif:HMM:NF013835.2
GO:0008479 - queuine tRNA-ribosyltransferase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF001140.0
GO:0016853 - isomerase activity [Evidence IEA]; GO:0016740 - transferase activity [Evidence IEA]
tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA
COORDINATES: protein motif:HMM:NF013862.2
patatin-like phospholipase family protein
COORDINATES: protein motif:HMM:NF010040.1
GO:0004357 - glutamate-cysteine ligase activity [Evidence IEA]
GO:0042398 - cellular modified amino acid biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR01450.1
GO:0009338 - exodeoxyribonuclease V complex [Evidence IEA]
GO:0008854 - exodeoxyribonuclease V activity [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00609.1
COORDINATES: protein motif:HMM:TIGR01447.1
COORDINATES: protein motif:HMM:NF012568.2
GO:0008299 - isoprenoid biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_005797956.1
COORDINATES: protein motif:HMM:NF020110.2
COORDINATES: protein motif:HMM:NF001055.0
GO:0006282 - regulation of DNA repair [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_018985823.1
GO:0008094 - ATP-dependent activity, acting on DNA [Evidence IEA]; GO:0003677 - DNA binding [Evidence IEA]
GO:0006310 - DNA recombination [Evidence IEA]; GO:0006281 - DNA repair [Evidence IEA]; GO:0009432 - SOS response [Evidence IEA]
COORDINATES: protein motif:HMM:NF014517.2
COORDINATES: protein motif:HMM:NF016489.2
COORDINATES: protein motif:HMM:TIGR01379.1
GO:0009030 - thiamine-phosphate kinase activity [Evidence IEA]
GO:0009228 - thiamine biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR01951.1
transcription antitermination factor NusB
COORDINATES: similar to AA sequence:RefSeq:WP_018987631.1
GO:0009349 - riboflavin synthase complex [Evidence IEA]
GO:0000906 - 6,7-dimethyl-8-ribityllumazine synthase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_010951110.1
GO:0008686 - 3,4-dihydroxy-2-butanone-4-phosphate synthase activity [Evidence IEA]; GO:0003935 - GTP cyclohydrolase II activity [Evidence IEA]
bifunctional 3,4-dihydroxy-2-butanone-4-phosphate synthase/GTP cyclohydrolase II
COORDINATES: similar to AA sequence:RefSeq:WP_019920541.1
COORDINATES: protein motif:HMM:TIGR00326.1
GO:0008703 - 5-amino-6-(5-phosphoribosylamino)uracil reductase activity [Evidence IEA]; GO:0008835 - diaminohydroxyphosphoribosylaminopyrimidine deaminase activity [Evidence IEA]
bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD
COORDINATES: similar to AA sequence:RefSeq:WP_018986353.1
GO:0140110 - transcription regulator activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF008268.0
COORDINATES: protein motif:HMM:NF003593.1
COORDINATES: protein motif:HMM:NF014305.2
COORDINATES: protein motif:HMM:TIGR00361.1
GO:0009290 - DNA import into cell involved in transformation [Evidence IEA]
DNA internalization-related competence protein ComEC/Rec2
COORDINATES: protein motif:HMM:TIGR00691.1
bifunctional (p)ppGpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase
COORDINATES: similar to AA sequence:RefSeq:WP_012837162.1
COORDINATES: similar to AA sequence:RefSeq:WP_019920784.1
GO:0042953 - lipoprotein transport [Evidence IEA]
lipoprotein-releasing ABC transporter permease subunit
COORDINATES: similar to AA sequence:RefSeq:WP_002436798.1
GO:0004824 - lysine-tRNA ligase activity [Evidence IEA]
GO:0006430 - lysyl-tRNA aminoacylation [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00020.2
GO:0003747 - translation release factor activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF021646.2
COORDINATES: protein motif:HMM:TIGR00089.1
GO:0051539 - 4 iron, 4 sulfur cluster binding [Evidence IEA]; GO:1904047 - S-adenosyl-L-methionine binding [Evidence IEA]; GO:0008172 - S-methyltransferase activity [Evidence IEA]; GO:0016782 - transferase activity, transferring sulphur-containing groups [Evidence IEA]
GO:0018339 - peptidyl-L-beta-methylthioaspartic acid biosynthetic process from peptidyl-aspartic acid [Evidence IEA]
30S ribosomal protein S12 methylthiotransferase RimO
COORDINATES: protein motif:HMM:TIGR01848.1
polyhydroxyalkanoate synthesis repressor PhaR
COORDINATES: protein motif:HMM:NF014582.2
COORDINATES: protein motif:HMM:NF014619.2
COORDINATES: protein motif:HMM:TIGR03302.1
outer membrane protein assembly factor BamD
COORDINATES: protein motif:HMM:NF002058.0
COORDINATES: similar to AA sequence:RefSeq:WP_011001079.1
GO:0004634 - phosphopyruvate hydratase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012364209.1
GO:0008676 - 3-deoxy-8-phosphooctulonate synthase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_019922745.1
GO:0003883 - CTP synthase activity [Evidence IEA]
GO:0006241 - CTP biosynthetic process [Evidence IEA]; GO:0006221 - pyrimidine nucleotide biosynthetic process [Evidence IEA]
PAS domain-containing methyl-accepting chemotaxis protein
COORDINATES: protein motif:HMM:NF014715.2
GO:0004340 - glucokinase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF025742.2
GO:0009055 - electron transfer activity [Evidence IEA]; GO:0020037 - heme binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_005123317.1
GO:0004802 - transketolase activity [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR01521.1
catalyzes the reversible aldol condensation of dihydroxyacetonephosphate and glyceraldehyde 3-phosphate in the Calvin cycle, glycolysis, and/or gluconeogenesis; catalyzes the reversible aldol condensation of dihydroxyacetonephosphate and glyceraldehyde 3-phosphate in the Calvin cycle, glycolysis, and/or gluconeogenesis; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: protein motif:HMM:NF024811.2
COORDINATES: similar to AA sequence:RefSeq:WP_002212300.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0008974 - phosphoribulokinase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF006780.0
GO:0042132 - fructose 1,6-bisphosphate 1-phosphatase activity [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00765.1
COORDINATES: protein motif:HMM:NF002087.0
GO:0003852 - 2-isopropylmalate synthase activity [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00409.1
GO:0002161 - aminoacyl-tRNA editing activity [Evidence IEA]; GO:0004812 - aminoacyl-tRNA ligase activity [Evidence IEA]; GO:0005524 - ATP binding [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]; GO:0004827 - proline-tRNA ligase activity [Evidence IEA]
GO:0006433 - prolyl-tRNA aminoacylation [Evidence IEA]; GO:0006418 - tRNA aminoacylation for protein translation [Evidence IEA]
RNA-guided endonuclease TnpB family protein
COORDINATES: protein motif:HMM:NF012402.2
COORDINATES: protein motif:HMM:NF013331.2
COORDINATES: similar to AA sequence:RefSeq:NP_309753.1
two-component system response regulator NarL
COORDINATES: protein motif:HMM:NF027602.2
COORDINATES: protein motif:HMM:NF039803.1
COORDINATES: protein motif:HMM:NF013955.2
COORDINATES: protein motif:HMM:NF012422.2
LuxR C-terminal-related transcriptional regulator
COORDINATES: protein motif:HMM:NF012321.2
COORDINATES: protein motif:HMM:NF025121.2
COORDINATES: protein motif:HMM:NF017953.2
COORDINATES: protein motif:HMM:NF014684.2
Part of the ABC transporter complex LivFGHMJ and LivFGHMK involved in the high-affinity transport of branched-chain amino acids; LivFGHMK is specific for the transport of leucine, while LivFGHMJ is a transporter for leucine, isoleucine, and valine; Derived by automated computational analysis using gene prediction method: Protein Homology.
high-affinity branched-chain amino acid ABC transporter permease LivM
COORDINATES: similar to AA sequence:RefSeq:WP_017878813.1
branched-chain amino acid ABC transporter permease
COORDINATES: similar to AA sequence:RefSeq:WP_019923094.1
GO:0004109 - coproporphyrinogen oxidase activity [Evidence IEA]
oxygen-dependent coproporphyrinogen oxidase
COORDINATES: similar to AA sequence:RefSeq:WP_019924664.1
GO:0008408 - 3'-5' exonuclease activity [Evidence IEA]; GO:0003677 - DNA binding [Evidence IEA]; GO:0003887 - DNA-directed DNA polymerase activity [Evidence IEA]; GO:0003676 - nucleic acid binding [Evidence IEA]
GO:0006261 - DNA-templated DNA replication [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00737.1
GO:0003824 - catalytic activity [Evidence IEA]; GO:0050660 - flavin adenine dinucleotide binding [Evidence IEA]; GO:0016491 - oxidoreductase activity [Evidence IEA]; GO:0017150 - tRNA dihydrouridine synthase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF014950.2
GO:0043565 - sequence-specific DNA binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_010393318.1
GO:0003824 - catalytic activity [Evidence IEA]; GO:0003937 - IMP cyclohydrolase activity [Evidence IEA]; GO:0004643 - phosphoribosylaminoimidazolecarboxamide formyltransferase activity [Evidence IEA]
GO:0006189 - 'de novo' IMP biosynthetic process [Evidence IEA]; GO:0006164 - purine nucleotide biosynthetic process [Evidence IEA]
bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase
COORDINATES: similar to AA sequence:RefSeq:WP_018986231.1
GO:0004637 - phosphoribosylamine-glycine ligase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF022639.2
COORDINATES: protein motif:HMM:NF003558.0
GO:0004413 - homoserine kinase activity [Evidence IEA]
GO:0009088 - threonine biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF041043.1
COORDINATES: protein motif:HMM:NF015722.2
formylglycine-generating enzyme family protein
COORDINATES: protein motif:HMM:NF014667.2
COORDINATES: protein motif:HMM:NF012343.2
GO:0004129 - cytochrome-c oxidase activity [Evidence IEA]; GO:0020037 - heme binding [Evidence IEA]
GO:0009060 - aerobic respiration [Evidence IEA]
cbb3-type cytochrome c oxidase subunit I
COORDINATES: protein motif:HMM:NF014486.2
cbb3-type cytochrome c oxidase subunit II
COORDINATES: protein motif:HMM:NF024834.2
COORDINATES: protein motif:HMM:NF023249.2
COORDINATES: protein motif:HMM:NF015851.2
NrfD/PsrC family molybdoenzyme membrane anchor subunit
COORDINATES: protein motif:HMM:NF024247.2
4Fe-4S dicluster domain-containing protein
COORDINATES: protein motif:HMM:NF025875.2
COORDINATES: similar to AA sequence:RefSeq:WP_019924668.1
COORDINATES: protein motif:HMM:TIGR00396.1
GO:0004823 - leucine-tRNA ligase activity [Evidence IEA]
GO:0006429 - leucyl-tRNA aminoacylation [Evidence IEA]
COORDINATES: protein motif:HMM:NF016290.2
GO:0019867 - outer membrane [Evidence IEA]
GO:0043165 - Gram-negative-bacterium-type cell outer membrane assembly [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR01128.1
COORDINATES: protein motif:HMM:NF012760.2
COORDINATES: protein motif:HMM:NF003809.0
GO:0033608 - formyl-CoA transferase activity [Evidence IEA]; GO:0005515 - protein binding [Evidence IEA]
GO:0033611 - oxalate catabolic process [Evidence IEA]; GO:0009636 - response to toxic substance [Evidence IEA]
COORDINATES: protein motif:HMM:NF014795.2
GO:0030976 - thiamine pyrophosphate binding [Evidence IEA]
COORDINATES: protein motif:HMM:NF012797.2
COORDINATES: protein motif:HMM:NF000595.1
GO:0003723 - RNA binding [Evidence IEA]; GO:0004523 - RNA-DNA hybrid ribonuclease activity [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00215.1
GO:0008915 - lipid-A-disaccharide synthase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_019919680.1
GO:0008780 - acyl-[acyl-carrier-protein]-UDP-N-acetylglucosamine O-acyltransferase activity [Evidence IEA]
acyl-ACP--UDP-N-acetylglucosamine O-acyltransferase
COORDINATES: protein motif:HMM:TIGR01750.1
COORDINATES: protein motif:HMM:NF002060.0
UDP-3-O-(3-hydroxymyristoyl)glucosamine N-acyltransferase
COORDINATES: protein motif:HMM:NF015871.2
COORDINATES: protein motif:HMM:TIGR03303.1
outer membrane protein assembly factor BamA
COORDINATES: protein motif:HMM:TIGR00054.1
COORDINATES: similar to AA sequence:RefSeq:WP_019919686.1
GO:0030604 - 1-deoxy-D-xylulose-5-phosphate reductoisomerase activity [Evidence IEA]
1-deoxy-D-xylulose-5-phosphate reductoisomerase
COORDINATES: protein motif:HMM:NF013327.2
COORDINATES: similar to AA sequence:RefSeq:WP_019919688.1
COORDINATES: similar to AA sequence:RefSeq:WP_019389871.1
GO:0008135 - translation factor activity, RNA binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_018985648.1
GO:0033862 - UMP kinase activity [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00116.1
GO:0003746 - translation elongation factor activity [Evidence IEA]
GO:0006414 - translational elongation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_005132117.1
GO:0022627 - cytosolic small ribosomal subunit [Evidence IEA]; GO:0000314 - organellar small ribosomal subunit [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_019919693.1
COORDINATES: protein motif:HMM:NF002837.0
GO:0008773 - [protein-PII] uridylyltransferase activity [Evidence IEA]
GO:0006807 - nitrogen compound metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_019919730.1
COORDINATES: protein motif:HMM:TIGR01099.1
GO:0003983 - UTP:glucose-1-phosphate uridylyltransferase activity [Evidence IEA]
GO:0009225 - nucleotide-sugar metabolic process [Evidence IEA]
UTP--glucose-1-phosphate uridylyltransferase GalU
COORDINATES: similar to AA sequence:RefSeq:WP_019919731.1
GO:0003677 - DNA binding [Evidence IEA]; GO:0003911 - DNA ligase (NAD+) activity [Evidence IEA]
GO:0006281 - DNA repair [Evidence IEA]; GO:0006260 - DNA replication [Evidence IEA]
COORDINATES: protein motif:HMM:NF016257.2
GO:0090529 - cell septum assembly [Evidence IEA]
cell division protein ZipA C-terminal FtsZ-binding domain-containing protein
COORDINATES: protein motif:HMM:TIGR03139.1
GO:0033739 - preQ1 synthase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012536782.1
GO:0009016 - succinyldiaminopimelate transaminase activity [Evidence IEA]
GO:0019877 - diaminopimelate biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00965.1
GO:0008666 - 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase activity [Evidence IEA]
2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase
COORDINATES: protein motif:HMM:NF009557.0
GO:0009014 - succinyl-diaminopimelate desuccinylase activity [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR03533.1
GO:0008276 - protein methyltransferase activity [Evidence IEA]; GO:0008757 - S-adenosylmethionine-dependent methyltransferase activity [Evidence IEA]
GO:0018364 - peptidyl-glutamine methylation [Evidence IEA]; GO:0042273 - ribosomal large subunit biogenesis [Evidence IEA]
50S ribosomal protein L3 N(5)-glutamine methyltransferase
COORDINATES: protein motif:HMM:TIGR00093.1
GO:0001522 - pseudouridine synthesis [Evidence IEA]
COORDINATES: protein motif:HMM:NF016005.2
GO:0051304 - chromosome separation [Evidence IEA]
COORDINATES: protein motif:HMM:NF008922.0
GO:0005524 - ATP binding [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]; GO:0004830 - tryptophan-tRNA ligase activity [Evidence IEA]
GO:0006436 - tryptophanyl-tRNA aminoacylation [Evidence IEA]
COORDINATES: protein motif:HMM:NF014826.2
3',5'-nucleoside bisphosphate phosphatase
COORDINATES: protein motif:HMM:NF001325.0
COORDINATES: protein motif:HMM:NF013851.2
COORDINATES: protein motif:HMM:NF024545.2
COORDINATES: similar to AA sequence:RefSeq:WP_019921022.1
GO:0004642 - phosphoribosylformylglycinamidine synthase activity [Evidence IEA]
phosphoribosylformylglycinamidine synthase
COORDINATES: protein motif:HMM:TIGR03317.1
COORDINATES: protein motif:HMM:NF015251.2
COORDINATES: protein motif:HMM:NF006530.0
GO:0008413 - 8-oxo-7,8-dihydroguanosine triphosphate pyrophosphatase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_019921453.1
GO:0004358 - glutamate N-acetyltransferase activity [Evidence IEA]
GO:0006526 - arginine biosynthetic process [Evidence IEA]
bifunctional glutamate N-acetyltransferase/amino-acid acetyltransferase ArgJ
COORDINATES: similar to AA sequence:RefSeq:WP_019921448.1
GO:0006886 - intracellular protein transport [Evidence IEA]; GO:0017038 - protein import [Evidence IEA]; GO:0006605 - protein targeting [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00325.1
GO:0008759 - UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase activity [Evidence IEA]
UDP-3-O-acyl-N-acetylglucosamine deacetylase
COORDINATES: similar to AA sequence:RefSeq:WP_018987363.1
GO:0003924 - GTPase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_018987364.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0005515 - protein binding [Evidence IEA]
GO:0043093 - FtsZ-dependent cytokinesis [Evidence IEA]
COORDINATES: protein motif:HMM:NF015739.2
COORDINATES: protein motif:HMM:NF010480.0
GO:0071949 - FAD binding [Evidence IEA]; GO:0008762 - UDP-N-acetylmuramate dehydrogenase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_008445436.1
GO:0008763 - UDP-N-acetylmuramate-L-alanine ligase activity [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR01133.1
GO:0050511 - undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase activity [Evidence IEA]
undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase
COORDINATES: protein motif:HMM:NF013279.2
GO:0051301 - cell division [Evidence IEA]; GO:0009252 - peptidoglycan biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR01087.1
GO:0008764 - UDP-N-acetylmuramoylalanine-D-glutamate ligase activity [Evidence IEA]
UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase
COORDINATES: similar to AA sequence:RefSeq:WP_008445432.1
GO:0008963 - phospho-N-acetylmuramoyl-pentapeptide-transferase activity [Evidence IEA]
phospho-N-acetylmuramoyl-pentapeptide- transferase
COORDINATES: protein motif:HMM:TIGR01143.1
UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D- alanine ligase
COORDINATES: protein motif:HMM:NF001126.0
GO:0005524 - ATP binding [Evidence IEA]; GO:0016874 - ligase activity [Evidence IEA]
GO:0009058 - biosynthetic process [Evidence IEA]; GO:0051301 - cell division [Evidence IEA]; GO:0008360 - regulation of cell shape [Evidence IEA]
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2, 6-diaminopimelate ligase
COORDINATES: protein motif:HMM:NF013100.2
COORDINATES: protein motif:HMM:NF016860.2
COORDINATES: protein motif:HMM:TIGR00006.1
GO:0016434 - rRNA (cytosine) methyltransferase activity [Evidence IEA]
16S rRNA (cytosine(1402)-N(4))-methyltransferase RsmH
COORDINATES: protein motif:HMM:TIGR00242.1
GO:0051302 - regulation of cell division [Evidence IEA]
division/cell wall cluster transcriptional repressor MraZ
COORDINATES: protein motif:HMM:NF015956.2
COORDINATES: protein motif:HMM:NF014474.2
COORDINATES: nucleotide motif:Rfam:14.4:RF00010
COORDINATES: protein motif:HMM:TIGR00856.1
GO:0004151 - dihydroorotase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004637163.1
GO:0004360 - glutamine-fructose-6-phosphate transaminase (isomerizing) activity [Evidence IEA]
GO:0006040 - amino sugar metabolic process [Evidence IEA]; GO:0009252 - peptidoglycan biosynthetic process [Evidence IEA]
glutamine--fructose-6-phosphate transaminase (isomerizing)
COORDINATES: protein motif:HMM:NF023432.2
COORDINATES: protein motif:HMM:NF014774.2
heterodisulfide reductase-related iron-sulfur binding cluster
COORDINATES: protein motif:HMM:NF012436.2
COORDINATES: similar to AA sequence:RefSeq:WP_018986167.1
COORDINATES: similar to AA sequence:RefSeq:WP_019921097.1
GO:0051539 - 4 iron, 4 sulfur cluster binding [Evidence IEA]; GO:1904047 - S-adenosyl-L-methionine binding [Evidence IEA]
COORDINATES: protein motif:HMM:NF013411.2
COORDINATES: protein motif:HMM:NF018242.2
COORDINATES: protein motif:HMM:NF012503.2
GO:0016831 - carboxy-lyase activity [Evidence IEA]; GO:0030170 - pyridoxal phosphate binding [Evidence IEA]
GO:0019752 - carboxylic acid metabolic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF020252.2
COORDINATES: protein motif:HMM:TIGR03170.1
GO:0009428 - bacterial-type flagellum basal body, distal rod, P ring [Evidence IEA]
GO:0001539 - cilium or flagellum-dependent cell motility [Evidence IEA]
flagellar basal body P-ring formation chaperone FlgA
COORDINATES: protein motif:HMM:TIGR01396.1
GO:0009429 - bacterial-type flagellum basal body, proximal rod [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_019882527.1
GO:0009425 - bacterial-type flagellum basal body [Evidence IEA]
COORDINATES: protein motif:HMM:NF025230.2
COORDINATES: similar to AA sequence:RefSeq:WP_019922845.1
COORDINATES: protein motif:HMM:NF009280.2
COORDINATES: similar to AA sequence:RefSeq:WP_018985040.1
GO:0009426 - bacterial-type flagellum basal body, distal rod [Evidence IEA]
GO:0071973 - bacterial-type flagellum-dependent cell motility [Evidence IEA]
COORDINATES: protein motif:HMM:NF014195.2
GO:0009427 - bacterial-type flagellum basal body, distal rod, L ring [Evidence IEA]
GO:0003774 - cytoskeletal motor activity [Evidence IEA]
flagellar basal body L-ring protein FlgH
COORDINATES: similar to AA sequence:RefSeq:WP_019922841.1
flagellar basal body P-ring protein FlgI
COORDINATES: protein motif:HMM:NF021638.2
COORDINATES: protein motif:HMM:TIGR02492.1
GO:0009424 - bacterial-type flagellum hook [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR02550.1
COORDINATES: protein motif:HMM:TIGR01400.1
GO:0044780 - bacterial-type flagellum assembly [Evidence IEA]; GO:0006605 - protein targeting [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_018985033.1
GO:0009288 - bacterial-type flagellum [Evidence IEA]
COORDINATES: protein motif:HMM:NF009438.0
The bacterial flagellar biogenesis protein FliP forms a type III secretion system (T3SS)-type pore required for flagellar assembly.; The bacterial flagellar biogenesis protein FliP forms a type III secretion system (T3SS)-type pore required for flagellar assembly; Derived by automated computational analysis using gene prediction method: Protein Homology.
flagellar type III secretion system pore protein FliP
COORDINATES: protein motif:HMM:TIGR03500.1
GO:0044781 - bacterial-type flagellum organization [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_019882541.1
COORDINATES: similar to AA sequence:RefSeq:WP_018985029.1
COORDINATES: protein motif:HMM:NF015693.2
GO:0071973 - bacterial-type flagellum-dependent cell motility [Evidence IEA]; GO:0006935 - chemotaxis [Evidence IEA]
flagellar basal body-associated protein FliL
COORDINATES: protein motif:HMM:NF014207.2
flagellar hook-length control protein FliK
COORDINATES: protein motif:HMM:TIGR02473.1
GO:0009288 - bacterial-type flagellum [Evidence IEA]; GO:0016020 - membrane [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR01026.1
COORDINATES: protein motif:HMM:NF014196.2
COORDINATES: protein motif:HMM:TIGR00207.1
GO:0009433 - bacterial-type flagellum basal body, C ring [Evidence IEA]
GO:0006935 - chemotaxis [Evidence IEA]; GO:0001539 - cilium or flagellum-dependent cell motility [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00206.1
GO:0009431 - bacterial-type flagellum basal body, MS ring [Evidence IEA]
flagellar basal-body MS-ring/collar protein FliF
COORDINATES: protein motif:HMM:TIGR00205.1
flagellar hook-basal body complex protein FliE
COORDINATES: protein motif:HMM:NF018894.2
COORDINATES: similar to AA sequence:RefSeq:WP_019922819.1
EscU/YscU/HrcU family type III secretion system export apparatus switch protein
COORDINATES: protein motif:HMM:NF017237.2
COORDINATES: protein motif:HMM:NF014604.2
COORDINATES: protein motif:HMM:NF018852.2
GO:0007155 - cell adhesion [Evidence IEA]
COORDINATES: protein motif:HMM:NF015602.2
COORDINATES: protein motif:HMM:NF012874.2
COORDINATES: protein motif:HMM:NF018290.2
COORDINATES: protein motif:HMM:TIGR03824.1
GO:0045892 - negative regulation of DNA-templated transcription [Evidence IEA]
flagellar biosynthesis anti-sigma factor FlgM
COORDINATES: protein motif:HMM:NF016985.2
COORDINATES: protein motif:HMM:NF006583.0
COORDINATES: protein motif:HMM:TIGR02937.1
COORDINATES: protein motif:HMM:NF012662.2
GO:0044781 - bacterial-type flagellum organization [Evidence IEA]; GO:0006614 - SRP-dependent cotranslational protein targeting to membrane [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR01398.1
COORDINATES: protein motif:HMM:TIGR00328.1
COORDINATES: similar to AA sequence:RefSeq:WP_018985217.1
GO:0045893 - positive regulation of DNA-templated transcription [Evidence IEA]; GO:1902208 - regulation of bacterial-type flagellum assembly [Evidence IEA]
flagellar transcriptional regulator FlhD
COORDINATES: similar to AA sequence:RefSeq:WP_018985218.1
flagellar transcriptional regulator FlhC
COORDINATES: similar to AA sequence:RefSeq:WP_019920741.1
COORDINATES: similar to AA sequence:RefSeq:WP_019920227.1
COORDINATES: protein motif:HMM:NF013731.2
COORDINATES: similar to AA sequence:RefSeq:WP_019882316.1
COORDINATES: protein motif:HMM:NF008368.0
GO:0050920 - regulation of chemotaxis [Evidence IEA]
COORDINATES: protein motif:HMM:NF012376.2
COORDINATES: similar to AA sequence:RefSeq:WP_014578420.1
GO:0004794 - L-threonine ammonia-lyase activity [Evidence IEA]
GO:0009097 - isoleucine biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_019922775.1
GO:0004751 - ribose-5-phosphate isomerase activity [Evidence IEA]
GO:0009052 - pentose-phosphate shunt, non-oxidative branch [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_019883784.1
GO:0051049 - regulation of transport [Evidence IEA]
phosphate signaling complex protein PhoU
COORDINATES: similar to AA sequence:RefSeq:WP_019448306.1
GO:0005506 - iron ion binding [Evidence IEA]
COORDINATES: protein motif:HMM:NF003641.0
GO:0004042 - acetyl-CoA:L-glutamate N-acetyltransferase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF008692.0
16S rRNA (uracil(1498)-N(3))-methyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_012416556.1
GO:0006094 - gluconeogenesis [Evidence IEA]; GO:0019682 - glyceraldehyde-3-phosphate metabolic process [Evidence IEA]; GO:0006096 - glycolytic process [Evidence IEA]
type I glyceraldehyde-3-phosphate dehydrogenase
COORDINATES: protein motif:HMM:NF012389.2
COORDINATES: similar to AA sequence:RefSeq:WP_019923802.1
GO:0004743 - pyruvate kinase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_019923804.1
GO:0004639 - phosphoribosylaminoimidazolesuccinocarboxamide synthase activity [Evidence IEA]
GO:0006164 - purine nucleotide biosynthetic process [Evidence IEA]
phosphoribosylaminoimidazolesuccinocarboxamide synthase
COORDINATES: protein motif:HMM:NF024140.2
substrate-binding domain-containing protein
COORDINATES: protein motif:HMM:TIGR00914.1
GO:0051139 - metal cation:proton antiporter activity [Evidence IEA]
CusA/CzcA family heavy metal efflux RND transporter
COORDINATES: similar to AA sequence:RefSeq:WP_019922971.1
COORDINATES: protein motif:HMM:NF021255.2
COORDINATES: protein motif:HMM:NF020387.2
COORDINATES: similar to AA sequence:RefSeq:WP_002280569.1
GO:0004521 - endoribonuclease activity [Evidence IEA]
GO:0043571 - maintenance of CRISPR repeat elements [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR03640.1
GO:0004519 - endonuclease activity [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0003676 - nucleic acid binding [Evidence IEA]
GO:0051607 - defense response to virus [Evidence IEA]; GO:0043571 - maintenance of CRISPR repeat elements [Evidence IEA]
type I-C CRISPR-associated endonuclease Cas1c
COORDINATES: protein motif:HMM:TIGR00372.1
COORDINATES: protein motif:HMM:NF019540.2
type II toxin-antitoxin system HicA family toxin
COORDINATES: protein motif:HMM:TIGR02589.1
type I-C CRISPR-associated protein Cas7/Csd2
COORDINATES: protein motif:HMM:TIGR01863.1
GO:0005575 - cellular_component [Evidence IEA]
type I-C CRISPR-associated protein Cas8c/Csd1
COORDINATES: similar to AA sequence:RefSeq:WP_003762769.1
type I-C CRISPR-associated protein Cas5c
COORDINATES: protein motif:HMM:TIGR01587.1
COORDINATES: protein motif:HMM:NF024676.2
COORDINATES: protein motif:HMM:NF016286.2
ClpXP protease specificity-enhancing factor
COORDINATES: similar to AA sequence:RefSeq:WP_018986649.1
COORDINATES: protein motif:HMM:NF014247.2
COORDINATES: similar to AA sequence:RefSeq:WP_014592292.1
cytochrome bc complex cytochrome b subunit
COORDINATES: similar to AA sequence:RefSeq:WP_009521518.1
GO:0045275 - respiratory chain complex III [Evidence IEA]
GO:0009055 - electron transfer activity [Evidence IEA]; GO:0008121 - ubiquinol-cytochrome-c reductase activity [Evidence IEA]
ubiquinol-cytochrome c reductase iron-sulfur subunit
COORDINATES: protein motif:HMM:TIGR00945.1
COORDINATES: protein motif:HMM:TIGR01410.1
GO:0015628 - protein secretion by the type II secretion system [Evidence IEA]; GO:0015031 - protein transport [Evidence IEA]
Sec-independent protein translocase protein TatB
COORDINATES: protein motif:HMM:NF002813.0
GO:0043953 - protein transport by the Tat complex [Evidence IEA]
Sec-independent protein translocase subunit TatA
COORDINATES: similar to AA sequence:RefSeq:WP_019924117.1
histidine triad nucleotide-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_006890815.1
GO:0004636 - phosphoribosyl-ATP diphosphatase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_018054358.1
GO:0004635 - phosphoribosyl-AMP cyclohydrolase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_019868453.1
GO:0000107 - imidazoleglycerol-phosphate synthase activity [Evidence IEA]
imidazole glycerol phosphate synthase subunit HisF
COORDINATES: protein motif:HMM:TIGR00007.1
GO:0003949 - 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino]imidazole-4- carboxamide isomerase activity [Evidence IEA]
1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino]imidazole-4- carboxamide isomerase
COORDINATES: similar to AA sequence:RefSeq:WP_018054361.1
GO:0016884 - carbon-nitrogen ligase activity, with glutamine as amido-N-donor [Evidence IEA]; GO:0000107 - imidazoleglycerol-phosphate synthase activity [Evidence IEA]
imidazole glycerol phosphate synthase subunit HisH
COORDINATES: similar to AA sequence:RefSeq:WP_018054362.1
GO:0004424 - imidazoleglycerol-phosphate dehydratase activity [Evidence IEA]
imidazoleglycerol-phosphate dehydratase HisB
COORDINATES: similar to AA sequence:RefSeq:WP_019924126.1
GO:0004399 - histidinol dehydrogenase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_018986669.1
GO:0003879 - ATP phosphoribosyltransferase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_019924128.1
GO:0008760 - UDP-N-acetylglucosamine 1-carboxyvinyltransferase activity [Evidence IEA]
UDP-N-acetylglucosamine 1-carboxyvinyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_018986672.1
COORDINATES: similar to AA sequence:RefSeq:WP_008443078.1
COORDINATES: protein motif:HMM:NF024857.2
COORDINATES: protein motif:HMM:NF017319.2
COORDINATES: protein motif:HMM:TIGR04430.1
GO:0015914 - phospholipid transport [Evidence IEA]
outer membrane lipid asymmetry maintenance protein MlaD
COORDINATES: protein motif:HMM:NF033619.1
GO:0043190 - ATP-binding cassette (ABC) transporter complex [Evidence IEA]
lipid asymmetry maintenance ABC transporter permease subunit MlaE
COORDINATES: similar to AA sequence:RefSeq:WP_019923707.1
GO:0008176 - tRNA (guanine-N7-)-methyltransferase activity [Evidence IEA]
tRNA (guanosine(46)-N7)-methyltransferase TrmB
COORDINATES: similar to AA sequence:RefSeq:WP_019924366.1
COORDINATES: protein motif:HMM:TIGR01683.1
COORDINATES: protein motif:HMM:TIGR00589.1
methylated-DNA--[protein]-cysteine S-methyltransferase
COORDINATES: protein motif:HMM:TIGR00539.1
GO:0051989 - coproporphyrinogen dehydrogenase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_020701662.1
RdgB/HAM1 family non-canonical purine NTP pyrophosphatase
COORDINATES: similar to AA sequence:RefSeq:WP_019922801.1
GO:0004549 - tRNA-specific ribonuclease activity [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00255.1
COORDINATES: similar to AA sequence:RefSeq:WP_019922805.1
GO:0004385 - guanylate kinase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_019939244.1
GO:0000345 - cytosolic DNA-directed RNA polymerase complex [Evidence IEA]
GO:0003899 - DNA-directed 5'-3' RNA polymerase activity [Evidence IEA]
GO:0006351 - DNA-templated transcription [Evidence IEA]
DNA-directed RNA polymerase subunit omega
COORDINATES: similar to AA sequence:RefSeq:WP_003754044.1
COORDINATES: protein motif:HMM:TIGR01084.1
GO:0004844 - uracil DNA N-glycosylase activity [Evidence IEA]
GO:0006310 - DNA recombination [Evidence IEA]; GO:0006281 - DNA repair [Evidence IEA]; GO:0006260 - DNA replication [Evidence IEA]
COORDINATES: protein motif:HMM:NF006029.0
GO:0008137 - NADH dehydrogenase (ubiquinone) activity [Evidence IEA]
GO:0042773 - ATP synthesis coupled electron transport [Evidence IEA]
COORDINATES: protein motif:HMM:NF021578.2
COORDINATES: protein motif:HMM:NF002068.0
GO:0004160 - dihydroxy-acid dehydratase activity [Evidence IEA]
GO:0009097 - isoleucine biosynthetic process [Evidence IEA]; GO:0009099 - valine biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00057.1
GO:0061710 - L-threonylcarbamoyladenylate synthase [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_018286761.1
GO:0008199 - ferric iron binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_000387720.1
COORDINATES: similar to AA sequence:RefSeq:WP_001206281.1
COORDINATES: protein motif:HMM:TIGR02704.1
GO:0015977 - carbon fixation [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR02703.1
COORDINATES: protein motif:HMM:NF020508.2
GO:0004089 - carbonate dehydratase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF023708.2
COORDINATES: protein motif:HMM:NF012329.2
ribulose bisphosphate carboxylase small subunit
COORDINATES: protein motif:HMM:NF003252.0
form I ribulose bisphosphate carboxylase large subunit
COORDINATES: protein motif:HMM:NF015620.2
COORDINATES: protein motif:HMM:TIGR00679.1
GO:0016791 - phosphatase activity [Evidence IEA]; GO:0004674 - protein serine/threonine kinase activity [Evidence IEA]
GO:0009401 - phosphoenolpyruvate-dependent sugar phosphotransferase system [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_008444516.1
COORDINATES: protein motif:HMM:TIGR00741.1
GO:0022626 - cytosolic ribosome [Evidence IEA]; GO:0005840 - ribosome [Evidence IEA]
GO:0045182 - translation regulator activity [Evidence IEA]
GO:0009386 - translational attenuation [Evidence IEA]
ribosome-associated translation inhibitor RaiA
COORDINATES: similar to AA sequence:RefSeq:WP_019923405.1
GO:0003677 - DNA binding [Evidence IEA]; GO:0001216 - DNA-binding transcription activator activity [Evidence IEA]; GO:0016987 - sigma factor activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004091254.1
GO:0043190 - ATP-binding cassette (ABC) transporter complex [Evidence IEA]; GO:0009898 - cytoplasmic side of plasma membrane [Evidence IEA]
GO:0042626 - ATPase-coupled transmembrane transporter activity [Evidence IEA]; GO:0015221 - lipopolysaccharide transmembrane transporter activity [Evidence IEA]
LPS export ABC transporter ATP-binding protein
COORDINATES: protein motif:HMM:TIGR03002.1
GO:0043190 - ATP-binding cassette (ABC) transporter complex [Evidence IEA]; GO:0030288 - outer membrane-bounded periplasmic space [Evidence IEA]
GO:0001530 - lipopolysaccharide binding [Evidence IEA]
lipopolysaccharide transport periplasmic protein LptA
COORDINATES: protein motif:HMM:TIGR04409.1
LPS export ABC transporter periplasmic protein LptC
COORDINATES: protein motif:HMM:TIGR01670.1
COORDINATES: similar to AA sequence:RefSeq:WP_020704448.1
GO:0016853 - isomerase activity [Evidence IEA]
KpsF/GutQ family sugar-phosphate isomerase
COORDINATES: similar to AA sequence:RefSeq:WP_019923410.1
monovalent cation:proton antiporter family protein
COORDINATES: protein motif:HMM:NF008163.0
GO:0003678 - DNA helicase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_019924640.1
GO:0008412 - 4-hydroxybenzoate octaprenyltransferase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF014200.2
GO:0004175 - endopeptidase activity [Evidence IEA]; GO:0009002 - serine-type D-Ala-D-Ala carboxypeptidase activity [Evidence IEA]
D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase
COORDINATES: similar to AA sequence:RefSeq:WP_004391824.1
COORDINATES: similar to AA sequence:RefSeq:WP_005920153.1
GO:0016887 - ATP hydrolysis activity [Evidence IEA]; GO:0005515 - protein binding [Evidence IEA]
60 kDa chaperone family; promotes refolding of misfolded polypeptides especially under stressful conditions; forms two stacked rings of heptamers to form a barrel-shaped 14mer; ends can be capped by GroES; misfolded proteins enter the barrel where they are refolded when GroES binds; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_019923183.1
GO:0004056 - argininosuccinate lyase activity [Evidence IEA]
GO:0042450 - arginine biosynthetic process via ornithine [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_019923447.1
GO:0008836 - diaminopimelate decarboxylase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF001310.0
GO:0004764 - shikimate 3-dehydrogenase (NADP+) activity [Evidence IEA]
GO:0019632 - shikimate metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_019921579.1
COORDINATES: similar to AA sequence:RefSeq:WP_018678638.1
GO:0004356 - glutamate-ammonia ligase activity [Evidence IEA]
GO:0006542 - glutamine biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_018987274.1
GO:0016310 - phosphorylation [Evidence IEA]; GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]; GO:0007165 - signal transduction [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_019880663.1
GO:0003677 - DNA binding [Evidence IEA]; GO:0000156 - phosphorelay response regulator activity [Evidence IEA]
GO:0000160 - phosphorelay signal transduction system [Evidence IEA]; GO:0006808 - regulation of nitrogen utilization [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00195.1
GO:0008853 - exodeoxyribonuclease III activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF015782.2
COORDINATES: protein motif:HMM:NF014659.2
COORDINATES: protein motif:HMM:NF015607.2
COORDINATES: protein motif:HMM:TIGR00670.1
GO:0016597 - amino acid binding [Evidence IEA]; GO:0004070 - aspartate carbamoyltransferase activity [Evidence IEA]
GO:0006207 - 'de novo' pyrimidine nucleobase biosynthetic process [Evidence IEA]; GO:0006520 - amino acid metabolic process [Evidence IEA]
aspartate carbamoyltransferase catalytic subunit
COORDINATES: protein motif:HMM:NF005791.0
COORDINATES: protein motif:HMM:NF013591.2
COORDINATES: protein motif:HMM:TIGR01352.1
COORDINATES: protein motif:HMM:NF012975.2
COORDINATES: protein motif:HMM:TIGR01081.1
GO:0016881 - acid-amino acid ligase activity [Evidence IEA]
UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase
COORDINATES: protein motif:HMM:NF007024.0
GO:0008705 - methionine synthase activity [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA]
COORDINATES: protein motif:HMM:NF019268.2
COORDINATES: similar to AA sequence:RefSeq:WP_013800177.1
COORDINATES: similar to AA sequence:RefSeq:WP_015367937.1
GO:0030234 - enzyme regulator activity [Evidence IEA]
GO:0006808 - regulation of nitrogen utilization [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004637064.1
COORDINATES: protein motif:HMM:TIGR00368.1
YifB family Mg chelatase-like AAA ATPase
COORDINATES: protein motif:HMM:NF013999.2
COORDINATES: protein motif:HMM:TIGR01994.1
GO:0016226 - iron-sulfur cluster assembly [Evidence IEA]
SUF system NifU family Fe-S cluster assembly protein
COORDINATES: protein motif:HMM:TIGR01979.1
COORDINATES: protein motif:HMM:TIGR01981.1
COORDINATES: similar to AA sequence:RefSeq:WP_005879209.1
COORDINATES: protein motif:HMM:NF008773.0
COORDINATES: protein motif:HMM:TIGR02944.1
GO:0016226 - iron-sulfur cluster assembly [Evidence IEA]; GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
SUF system Fe-S cluster assembly regulator
COORDINATES: similar to AA sequence:RefSeq:WP_019924467.1
COORDINATES: similar to AA sequence:RefSeq:WP_011798952.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0004363 - glutathione synthase activity [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR01205.1
COORDINATES: protein motif:HMM:NF000584.1
GO:0008964 - phosphoenolpyruvate carboxylase activity [Evidence IEA]
GO:0015977 - carbon fixation [Evidence IEA]; GO:0006099 - tricarboxylic acid cycle [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_015585405.1
GO:0004418 - hydroxymethylbilane synthase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF014641.2
COORDINATES: protein motif:HMM:NF016275.2
uroporphyrinogen-III C-methyltransferase
COORDINATES: protein motif:HMM:NF018875.2
heme biosynthesis HemY N-terminal domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_019921684.1
CDP-6-deoxy-delta-3,4-glucoseen reductase
COORDINATES: similar to AA sequence:RefSeq:WP_019921545.1
GO:0003855 - 3-dehydroquinate dehydratase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_020701156.1
acetyl-CoA carboxylase biotin carboxyl carrier protein
COORDINATES: protein motif:HMM:NF006367.0
GO:0003989 - acetyl-CoA carboxylase activity [Evidence IEA]; GO:0004075 - biotin carboxylase activity [Evidence IEA]
acetyl-CoA carboxylase biotin carboxylase subunit
COORDINATES: protein motif:HMM:NF018076.2
50S ribosomal protein L11 methyltransferase
COORDINATES: protein motif:HMM:NF002270.0
GO:0019464 - glycine decarboxylation via glycine cleavage system [Evidence IEA]
COORDINATES: protein motif:HMM:NF001808.0
GO:0016684 - oxidoreductase activity, acting on peroxide as acceptor [Evidence IEA]; GO:0008379 - thioredoxin peroxidase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_019923130.1
COORDINATES: similar to AA sequence:RefSeq:WP_019921344.1
GO:0008803 - bis(5'-nucleosyl)-tetraphosphatase (symmetrical) activity [Evidence IEA]
symmetrical bis(5'-nucleosyl)-tetraphosphatase
COORDINATES: protein motif:HMM:NF012863.2
GO:0016788 - hydrolase activity, acting on ester bonds [Evidence IEA]
COORDINATES: protein motif:HMM:NF015411.2
COORDINATES: protein motif:HMM:NF016101.2
COORDINATES: protein motif:HMM:NF013257.2
COORDINATES: protein motif:HMM:NF024967.2
COORDINATES: protein motif:HMM:NF013884.2
COORDINATES: protein motif:HMM:NF016800.2
COORDINATES: protein motif:HMM:NF025885.2
COORDINATES: protein motif:HMM:NF025692.2
COORDINATES: protein motif:HMM:NF008149.0
GO:0003723 - RNA binding [Evidence IEA]; GO:0008649 - rRNA methyltransferase activity [Evidence IEA]
GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]; GO:0001510 - RNA methylation [Evidence IEA]; GO:0006364 - rRNA processing [Evidence IEA]
16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB
COORDINATES: similar to AA sequence:RefSeq:WP_019924417.1
GO:0004479 - methionyl-tRNA formyltransferase activity [Evidence IEA]
GO:0006431 - methionyl-tRNA aminoacylation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_018678441.1
GO:0042586 - peptide deformylase activity [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00732.1
GO:0009294 - DNA-mediated transformation [Evidence IEA]
COORDINATES: protein motif:HMM:NF016264.2
COORDINATES: protein motif:HMM:TIGR01051.1
GO:0006260 - DNA replication [Evidence IEA]; GO:0006265 - DNA topological change [Evidence IEA]
COORDINATES: protein motif:HMM:NF012745.2
COORDINATES: similar to AA sequence:RefSeq:WP_019924503.1
GO:0009330 - DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) complex [Evidence IEA]
DNA topoisomerase (ATP-hydrolyzing) subunit B
COORDINATES: protein motif:HMM:TIGR00663.1
COORDINATES: protein motif:HMM:TIGR00362.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0003677 - DNA binding [Evidence IEA]; GO:0003688 - DNA replication origin binding [Evidence IEA]
GO:0006270 - DNA replication initiation [Evidence IEA]; GO:0006275 - regulation of DNA replication [Evidence IEA]
chromosomal replication initiator protein DnaA
COORDINATES: similar to AA sequence:RefSeq:WP_003816025.1
COORDINATES: similar to AA sequence:RefSeq:WP_020324524.1
membrane protein insertion efficiency factor YidD
COORDINATES: protein motif:HMM:NF002352.0
GO:0032977 - membrane insertase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF003661.0
GO:0005525 - GTP binding [Evidence IEA]; GO:0003924 - GTPase activity [Evidence IEA]; GO:0005515 - protein binding [Evidence IEA]
tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE
COORDINATES: similar to AA sequence:RefSeq:WP_002506211.1
GO:0050660 - flavin adenine dinucleotide binding [Evidence IEA]
GO:0008033 - tRNA processing [Evidence IEA]; GO:0002098 - tRNA wobble uridine modification [Evidence IEA]
tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG
COORDINATES: protein motif:HMM:NF014575.2
GO:0046118 - 7-methylguanosine biosynthetic process [Evidence IEA]; GO:0031167 - rRNA methylation [Evidence IEA]
16S rRNA (guanine(527)-N(7))-methyltransferase RsmG
COORDINATES: similar to AA sequence:RefSeq:WP_008443425.1
COORDINATES: protein motif:HMM:NF015834.2
COORDINATES: similar to AA sequence:RefSeq:WP_004773235.1
GO:0045263 - proton-transporting ATP synthase complex, coupling factor F(o) [Evidence IEA]
GO:0015078 - proton transmembrane transporter activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_018987204.1
COORDINATES: similar to AA sequence:RefSeq:WP_013149444.1
COORDINATES: protein motif:HMM:NF004402.0
COORDINATES: similar to AA sequence:RefSeq:WP_004723422.1
COORDINATES: similar to AA sequence:RefSeq:WP_018678429.1
GO:0045261 - proton-transporting ATP synthase complex, catalytic core F(1) [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_020045332.1
COORDINATES: protein motif:HMM:NF001847.0
COORDINATES: similar to AA sequence:RefSeq:WP_019924069.1
GO:0019134 - glucosamine-1-phosphate N-acetyltransferase activity [Evidence IEA]; GO:0003977 - UDP-N-acetylglucosamine diphosphorylase activity [Evidence IEA]
GO:0009103 - lipopolysaccharide biosynthetic process [Evidence IEA]; GO:0009252 - peptidoglycan biosynthetic process [Evidence IEA]
bifunctional UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase GlmU
COORDINATES: protein motif:HMM:NF024853.2
thiol:disulfide interchange protein DsbA/DsbL
COORDINATES: protein motif:HMM:NF016895.2
GO:0042834 - peptidoglycan binding [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00456.1
GO:0004814 - arginine-tRNA ligase activity [Evidence IEA]
GO:0006420 - arginyl-tRNA aminoacylation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013436118.1
COORDINATES: similar to AA sequence:RefSeq:WP_018987227.1
hydroxymethylpyrimidine/phosphomethylpyrimidine kinase
COORDINATES: protein motif:HMM:NF014622.2
COORDINATES: similar to AA sequence:RefSeq:WP_019921329.1
GO:0042286 - glutamate-1-semialdehyde 2,1-aminomutase activity [Evidence IEA]
glutamate-1-semialdehyde 2,1-aminomutase
COORDINATES: protein motif:HMM:TIGR03598.1
ribosome biogenesis GTP-binding protein YihA/YsxC
COORDINATES: protein motif:HMM:NF012702.2
GO:0003824 - catalytic activity [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0004655 - porphobilinogen synthase activity [Evidence IEA]
GO:0033014 - tetrapyrrole biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR02074.1
COORDINATES: protein motif:HMM:TIGR01357.1
GO:0003856 - 3-dehydroquinate synthase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_019880972.1
COORDINATES: similar to AA sequence:RefSeq:WP_019924139.1
GO:0003824 - catalytic activity [Evidence IEA]; GO:0015930 - glutamate synthase activity [Evidence IEA]; GO:0016491 - oxidoreductase activity [Evidence IEA]
GO:0006537 - glutamate biosynthetic process [Evidence IEA]; GO:0006807 - nitrogen compound metabolic process [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR01317.1
COORDINATES: protein motif:HMM:NF013381.2
GO:0004853 - uroporphyrinogen decarboxylase activity [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00595.1
GO:0005658 - alpha DNA polymerase:primase complex [Evidence IEA]
GO:0003678 - DNA helicase activity [Evidence IEA]; GO:0003688 - DNA replication origin binding [Evidence IEA]; GO:0016818 - hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides [Evidence IEA]
COORDINATES: protein motif:HMM:NF001389.0
GO:0050380 - undecaprenyl-diphosphatase activity [Evidence IEA]
GO:0016311 - dephosphorylation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_007116599.1
COORDINATES: similar to AA sequence:RefSeq:WP_019922808.1
GO:0003677 - DNA binding [Evidence IEA]; GO:0070063 - RNA polymerase binding [Evidence IEA]
GO:0032784 - regulation of DNA-templated transcription elongation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_019923727.1
protein-L-isoaspartate O-methyltransferase
COORDINATES: protein motif:HMM:NF016311.2
3-deoxy-D-manno-octulosonic acid transferase
COORDINATES: protein motif:HMM:TIGR02193.1
lipopolysaccharide heptosyltransferase I
COORDINATES: protein motif:HMM:TIGR02203.1
GO:0005319 - lipid transporter activity [Evidence IEA]
GO:0006869 - lipid transport [Evidence IEA]
lipid A export permease/ATP-binding protein MsbA
COORDINATES: protein motif:HMM:NF001278.0
GO:0051073 - adenosylcobinamide-GDP ribazoletransferase activity [Evidence IEA]
adenosylcobinamide-GDP ribazoletransferase
COORDINATES: protein motif:HMM:NF000996.0
GO:0008939 - nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase activity [Evidence IEA]
GO:0009236 - cobalamin biosynthetic process [Evidence IEA]
nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_006484041.1
GO:0043752 - adenosylcobinamide kinase activity [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]
bifunctional adenosylcobinamide kinase/adenosylcobinamide-phosphate guanylyltransferase
COORDINATES: protein motif:HMM:NF001463.0
COORDINATES: protein motif:HMM:NF014680.2
COORDINATES: protein motif:HMM:NF016252.2
COORDINATES: protein motif:HMM:NF012621.2
heavy metal-associated domain-containing protein
COORDINATES: protein motif:HMM:NF006615.0
GO:0003676 - nucleic acid binding [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR01132.1
GO:0004614 - phosphoglucomutase activity [Evidence IEA]
phosphoglucomutase (alpha-D-glucose-1,6-bisphosphate-dependent)
COORDINATES: similar to AA sequence:RefSeq:WP_019919881.1
COORDINATES: protein motif:HMM:NF024949.2
COORDINATES: protein motif:HMM:NF018154.2
GO:0005524 - ATP binding [Evidence IEA]; GO:0016301 - kinase activity [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR04255.1
COORDINATES: protein motif:HMM:NF025808.2
multiubiquitin domain-containing protein
COORDINATES: protein motif:HMM:NF004804.0
COORDINATES: protein motif:HMM:NF039808.1
COORDINATES: similar to AA sequence:RefSeq:WP_086557979.1
frameshifted; internal stop; incomplete; partial in the middle of a contig; missing N-terminus and C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: protein motif:HMM:NF016358.2
Swt1 family HEPN domain-containing protein
COORDINATES: protein motif:HMM:NF022077.2
COORDINATES: protein motif:HMM:NF018357.2
COORDINATES: similar to AA sequence:RefSeq:WP_076612376.1
COORDINATES: protein motif:HMM:NF026010.2
COORDINATES: protein motif:HMM:NF024835.2
COORDINATES: similar to AA sequence:RefSeq:WP_020226641.1
COORDINATES: protein motif:HMM:NF001989.1
COORDINATES: protein motif:HMM:TIGR01140.1
GO:0048472 - threonine-phosphate decarboxylase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF015164.2
CobD/CbiB family cobalamin biosynthesis protein
COORDINATES: similar to AA sequence:RefSeq:WP_019923411.1
GO:0016722 - oxidoreductase activity, acting on metal ions [Evidence IEA]
GO:0009236 - cobalamin biosynthetic process [Evidence IEA]; GO:0032363 - FMN catabolic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF002204.1
GO:0042242 - cobyrinic acid a,c-diamide synthase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_019924911.1
GO:0008817 - corrinoid adenosyltransferase activity [Evidence IEA]
cob(I)yrinic acid a,c-diamide adenosyltransferase
COORDINATES: protein motif:HMM:NF021551.2
CRISPR system precrRNA processing endoribonuclease RAMP protein Cas6
COORDINATES: protein motif:HMM:NF020530.2
COORDINATES: protein motif:HMM:TIGR00287.1
GO:0004520 - endodeoxyribonuclease activity [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR01573.1
COORDINATES: protein motif:HMM:NF015728.2
RAMP superfamily CRISPR-associated protein
COORDINATES: similar to AA sequence:RefSeq:WP_012112352.1
COORDINATES: similar to AA sequence:RefSeq:WP_086558362.1
COORDINATES: protein motif:HMM:NF021006.2
TIGR02221 family CRISPR-associated protein
COORDINATES: protein motif:HMM:NF016258.2
outer membrane protein assembly factor BamE
COORDINATES: protein motif:HMM:NF021207.2
COORDINATES: protein motif:HMM:TIGR02584.1
COORDINATES: protein motif:HMM:NF017786.2
GO:0090529 - cell septum assembly [Evidence IEA]; GO:0043093 - FtsZ-dependent cytokinesis [Evidence IEA]
COORDINATES: protein motif:HMM:NF017016.2
COORDINATES: nucleotide motif:Rfam:14.4:RF00013
COORDINATES: similar to AA sequence:RefSeq:WP_000868810.1
COORDINATES: protein motif:HMM:NF016060.2
COORDINATES: similar to AA sequence:RefSeq:WP_012147227.1
COORDINATES: protein motif:HMM:NF004371.0
COORDINATES: similar to AA sequence:RefSeq:WP_005020265.1
transcription termination/antitermination protein NusG
COORDINATES: similar to AA sequence:RefSeq:WP_008105799.1
COORDINATES: similar to AA sequence:RefSeq:WP_009383841.1
COORDINATES: similar to AA sequence:RefSeq:WP_019881211.1
GO:0015934 - large ribosomal subunit [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_005122872.1
COORDINATES: similar to AA sequence:RefSeq:WP_019923551.1
DNA-directed RNA polymerase subunit beta
COORDINATES: similar to AA sequence:RefSeq:WP_018987691.1
DNA-directed RNA polymerase subunit beta'
COORDINATES: similar to AA sequence:RefSeq:WP_009206590.1
COORDINATES: similar to AA sequence:RefSeq:WP_013054923.1
COORDINATES: similar to AA sequence:RefSeq:WP_002508564.1
COORDINATES: similar to AA sequence:RefSeq:WP_013441128.1
COORDINATES: similar to AA sequence:RefSeq:WP_005233737.1
COORDINATES: similar to AA sequence:RefSeq:WP_011350675.1
GO:0022625 - cytosolic large ribosomal subunit [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_007891652.1
COORDINATES: similar to AA sequence:RefSeq:WP_004924105.1
COORDINATES: similar to AA sequence:RefSeq:WP_011148791.1
COORDINATES: similar to AA sequence:RefSeq:WP_018986274.1
COORDINATES: similar to AA sequence:RefSeq:WP_018986273.1
GO:0022627 - cytosolic small ribosomal subunit [Evidence IEA]; GO:0000312 - plastid small ribosomal subunit [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013340739.1
COORDINATES: similar to AA sequence:RefSeq:WP_004929762.1
COORDINATES: similar to AA sequence:RefSeq:WP_018986270.1
COORDINATES: similar to AA sequence:RefSeq:WP_004145357.1
COORDINATES: similar to AA sequence:RefSeq:WP_018986268.1
COORDINATES: similar to AA sequence:RefSeq:WP_001096198.1
COORDINATES: similar to AA sequence:RefSeq:WP_004924130.1
COORDINATES: similar to AA sequence:RefSeq:WP_011148781.1
COORDINATES: similar to AA sequence:RefSeq:WP_003031129.1
COORDINATES: similar to AA sequence:RefSeq:WP_003653654.1
COORDINATES: similar to AA sequence:RefSeq:WP_011478664.1
COORDINATES: similar to AA sequence:RefSeq:WP_004398455.1
COORDINATES: similar to AA sequence:RefSeq:WP_011095501.1
COORDINATES: similar to AA sequence:RefSeq:WP_004868351.1
COORDINATES: similar to AA sequence:RefSeq:WP_003130554.1
COORDINATES: similar to AA sequence:RefSeq:WP_020322760.1
COORDINATES: similar to AA sequence:RefSeq:WP_013147061.1
GO:0022627 - cytosolic small ribosomal subunit [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_018055418.1
COORDINATES: similar to AA sequence:RefSeq:WP_004410410.1
GO:0015935 - small ribosomal subunit [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_005970247.1
GO:0003677 - DNA binding [Evidence IEA]; GO:0003899 - DNA-directed 5'-3' RNA polymerase activity [Evidence IEA]; GO:0046983 - protein dimerization activity [Evidence IEA]
DNA-directed RNA polymerase subunit alpha
COORDINATES: similar to AA sequence:RefSeq:WP_010340456.1
GO:0022625 - cytosolic large ribosomal subunit [Evidence IEA]; GO:0005762 - mitochondrial large ribosomal subunit [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_019922296.1
COORDINATES: similar to AA sequence:RefSeq:WP_019923054.1
COORDINATES: similar to AA sequence:RefSeq:WP_003110349.1
COORDINATES: protein motif:HMM:NF014677.2
COORDINATES: similar to AA sequence:RefSeq:WP_004626539.1
COORDINATES: similar to AA sequence:RefSeq:WP_016099277.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0016887 - ATP hydrolysis activity [Evidence IEA]; GO:0003677 - DNA binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_019924547.1
GO:0003697 - single-stranded DNA binding [Evidence IEA]
GO:0006310 - DNA recombination [Evidence IEA]; GO:0006281 - DNA repair [Evidence IEA]; GO:0006260 - DNA replication [Evidence IEA]; GO:0006351 - DNA-templated transcription [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_002307075.1
GO:0004812 - aminoacyl-tRNA ligase activity [Evidence IEA]; GO:0005524 - ATP binding [Evidence IEA]; GO:0016874 - ligase activity [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]
GO:0006418 - tRNA aminoacylation for protein translation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_019883666.1
COORDINATES: similar to AA sequence:RefSeq:WP_018926503.1
COORDINATES: protein motif:HMM:NF017044.2
COORDINATES: similar to AA sequence:RefSeq:WP_019923375.1
GO:0008828 - dATP diphosphatase activity [Evidence IEA]; GO:0019177 - dihydroneopterin triphosphate pyrophosphohydrolase activity [Evidence IEA]
GO:0046656 - folic acid biosynthetic process [Evidence IEA]
dihydroneopterin triphosphate diphosphatase
COORDINATES: similar to AA sequence:RefSeq:WP_008919631.1
COORDINATES: similar to AA sequence:RefSeq:WP_019447061.1
COORDINATES: similar to AA sequence:RefSeq:WP_008445140.1
GO:0003942 - N-acetyl-gamma-glutamyl-phosphate reductase activity [Evidence IEA]
GO:0006592 - ornithine biosynthetic process [Evidence IEA]
N-acetyl-gamma-glutamyl-phosphate reductase
COORDINATES: similar to AA sequence:RefSeq:WP_018987542.1
iron-sulfur cluster insertion protein ErpA
COORDINATES: protein motif:HMM:NF015131.2
COORDINATES: similar to AA sequence:RefSeq:WP_018987648.1
COORDINATES: similar to AA sequence:RefSeq:WP_019923870.1
GO:0004048 - anthranilate phosphoribosyltransferase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_019923869.1
GO:0004425 - indole-3-glycerol-phosphate synthase activity [Evidence IEA]
GO:0006568 - tryptophan metabolic process [Evidence IEA]
indole-3-glycerol phosphate synthase TrpC
COORDINATES: similar to AA sequence:RefSeq:WP_017502070.1
COORDINATES: similar to AA sequence:RefSeq:WP_019883464.1
GO:0003991 - acetylglutamate kinase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF024589.2
COORDINATES: protein motif:HMM:NF033656.1
GO:0004497 - monooxygenase activity [Evidence IEA]
2-polyprenyl-3-methyl-6-methoxy-1,4-benzoquinone monooxygenase
COORDINATES: protein motif:HMM:TIGR00797.1
COORDINATES: similar to AA sequence:RefSeq:WP_018054613.1
GO:0004831 - tyrosine-tRNA ligase activity [Evidence IEA]
GO:0006437 - tyrosyl-tRNA aminoacylation [Evidence IEA]
COORDINATES: protein motif:HMM:NF039309.1
COORDINATES: protein motif:HMM:NF007139.0
GO:0005524 - ATP binding [Evidence IEA]; GO:0016773 - phosphotransferase activity, alcohol group as acceptor [Evidence IEA]
GO:0006040 - amino sugar metabolic process [Evidence IEA]; GO:0009254 - peptidoglycan turnover [Evidence IEA]
COORDINATES: protein motif:HMM:NF016243.2
COORDINATES: similar to AA sequence:RefSeq:WP_009565969.1
GO:0008837 - diaminopimelate epimerase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_017370549.1
GO:0004478 - methionine adenosyltransferase activity [Evidence IEA]
GO:0006556 - S-adenosylmethionine biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_019924734.1
GO:0004013 - adenosylhomocysteinase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_008444025.1
GO:0004489 - methylenetetrahydrofolate reductase (NAD(P)H) activity [Evidence IEA]
methylenetetrahydrofolate reductase [NAD(P)H]
COORDINATES: similar to AA sequence:RefSeq:WP_001278583.1
COORDINATES: protein motif:HMM:NF014673.2
COORDINATES: similar to AA sequence:RefSeq:WP_013345422.1
alanine--glyoxylate aminotransferase family protein
COORDINATES: protein motif:HMM:NF013871.2
multifunctional CCA tRNA nucleotidyl transferase/2'3'-cyclic phosphodiesterase/2'nucleotidase/phosphatase
COORDINATES: protein motif:HMM:NF022586.2
GO:0005524 - ATP binding [Evidence IEA]; GO:0003824 - catalytic activity [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]
ADP-forming succinate--CoA ligase subunit beta
COORDINATES: similar to AA sequence:RefSeq:WP_019923664.1
ferric iron uptake transcriptional regulator
COORDINATES: similar to AA sequence:RefSeq:WP_019923666.1
GO:0008839 - 4-hydroxy-tetrahydrodipicolinate reductase [Evidence IEA]
4-hydroxy-tetrahydrodipicolinate reductase
COORDINATES: similar to AA sequence:RefSeq:WP_019922142.1
GO:0005951 - carbamoyl-phosphate synthase complex [Evidence IEA]
GO:0004088 - carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity [Evidence IEA]
glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit
COORDINATES: similar to AA sequence:RefSeq:WP_019922143.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]
carbamoyl-phosphate synthase large subunit
COORDINATES: similar to AA sequence:RefSeq:WP_018986500.1
COORDINATES: protein motif:HMM:NF014087.2
COORDINATES: protein motif:HMM:NF013856.2
COORDINATES: protein motif:HMM:TIGR01241.2
GO:0016887 - ATP hydrolysis activity [Evidence IEA]; GO:0004222 - metalloendopeptidase activity [Evidence IEA]
GO:0051301 - cell division [Evidence IEA]; GO:0006508 - proteolysis [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_019922149.1
GO:0004156 - dihydropteroate synthase activity [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR01455.1
GO:0016868 - intramolecular transferase activity, phosphotransferases [Evidence IEA]; GO:0000287 - magnesium ion binding [Evidence IEA]; GO:0008966 - phosphoglucosamine mutase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_019922121.1
COORDINATES: protein motif:HMM:NF003921.0
GO:0009358 - polyphosphate kinase complex [Evidence IEA]
GO:0008976 - polyphosphate kinase activity [Evidence IEA]
GO:0006799 - polyphosphate biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF024836.2
COORDINATES: protein motif:HMM:TIGR03706.1
GO:0004309 - exopolyphosphatase activity [Evidence IEA]; GO:0000287 - magnesium ion binding [Evidence IEA]
GO:0006798 - polyphosphate catabolic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF008171.0
GO:0042301 - phosphate ion binding [Evidence IEA]
GO:0035435 - phosphate ion transmembrane transport [Evidence IEA]
phosphate ABC transporter substrate-binding protein PstS
COORDINATES: protein motif:HMM:TIGR02138.1
GO:0015415 - ATPase-coupled phosphate ion transmembrane transporter activity [Evidence IEA]
phosphate ABC transporter permease subunit PstC
COORDINATES: similar to AA sequence:RefSeq:WP_019922125.1
COORDINATES: similar to AA sequence:RefSeq:WP_019881850.1
GO:0055052 - ATP-binding cassette (ABC) transporter complex, substrate-binding subunit-containing [Evidence IEA]; GO:0009898 - cytoplasmic side of plasma membrane [Evidence IEA]
GO:0005524 - ATP binding [Evidence IEA]; GO:0015415 - ATPase-coupled phosphate ion transmembrane transporter activity [Evidence IEA]
phosphate ABC transporter ATP-binding protein PstB
COORDINATES: protein motif:HMM:NF012349.2
GO:0004807 - triose-phosphate isomerase activity [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00810.1
COORDINATES: similar to AA sequence:RefSeq:WP_012748607.1
COORDINATES: similar to AA sequence:RefSeq:WP_019881812.1
COORDINATES: protein motif:HMM:NF004730.0
COORDINATES: similar to AA sequence:RefSeq:WP_010399731.1
GO:0051287 - NAD binding [Evidence IEA]; GO:0016651 - oxidoreductase activity, acting on NAD(P)H [Evidence IEA]; GO:0048038 - quinone binding [Evidence IEA]
COORDINATES: protein motif:HMM:NF005723.0
NADH-quinone oxidoreductase subunit NuoE
COORDINATES: protein motif:HMM:NF010120.0
GO:0050136 - NADH dehydrogenase (quinone) activity [Evidence IEA]
NADH-quinone oxidoreductase subunit NuoF
COORDINATES: protein motif:HMM:TIGR01973.1
GO:0006120 - mitochondrial electron transport, NADH to ubiquinone [Evidence IEA]
NADH-quinone oxidoreductase subunit NuoG
COORDINATES: protein motif:HMM:NF004741.0
NADH-quinone oxidoreductase subunit NuoH
COORDINATES: similar to AA sequence:RefSeq:WP_007015106.1
GO:0051539 - 4 iron, 4 sulfur cluster binding [Evidence IEA]; GO:0016651 - oxidoreductase activity, acting on NAD(P)H [Evidence IEA]
NADH-quinone oxidoreductase subunit NuoI
COORDINATES: protein motif:HMM:NF005164.0
COORDINATES: similar to AA sequence:RefSeq:WP_019881823.1
NADH-quinone oxidoreductase subunit NuoK
COORDINATES: protein motif:HMM:NF005141.0
COORDINATES: protein motif:HMM:NF004501.0
COORDINATES: similar to AA sequence:RefSeq:WP_019920320.1
NADH-quinone oxidoreductase subunit NuoN
COORDINATES: protein motif:HMM:NF012514.2
COORDINATES: similar to AA sequence:RefSeq:WP_010255928.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0016887 - ATP hydrolysis activity [Evidence IEA]; GO:0051082 - unfolded protein binding [Evidence IEA]
COORDINATES: protein motif:HMM:NF016041.2
COORDINATES: similar to AA sequence:RefSeq:WP_019921573.1
COORDINATES: similar to AA sequence:RefSeq:WP_019921572.1
COORDINATES: similar to AA sequence:RefSeq:WP_019920470.1
GO:0008173 - RNA methyltransferase activity [Evidence IEA]
23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD
COORDINATES: protein motif:HMM:NF013214.2
COORDINATES: similar to AA sequence:RefSeq:WP_008447443.1
cyclic nucleotide-binding domain-containing protein
COORDINATES: protein motif:HMM:TIGR01511.1
COORDINATES: protein motif:HMM:NF012457.2
COORDINATES: protein motif:HMM:TIGR01272.1
COORDINATES: protein motif:HMM:NF013014.2
COORDINATES: similar to AA sequence:RefSeq:WP_016486902.1
replication-associated recombination protein A
COORDINATES: protein motif:HMM:TIGR01070.1
COORDINATES: similar to AA sequence:RefSeq:WP_012536694.1
nitric oxide reductase activation protein NorD
COORDINATES: similar to AA sequence:RefSeq:WP_006214488.1
COORDINATES: similar to AA sequence:RefSeq:WP_009567342.1
GO:0004654 - polyribonucleotide nucleotidyltransferase activity [Evidence IEA]
GO:0006402 - mRNA catabolic process [Evidence IEA]
polyribonucleotide nucleotidyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_019880976.1
COORDINATES: protein motif:HMM:NF007015.0
GO:0010974 - negative regulation of division septum assembly [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_018987491.1
YebC/PmpR family DNA-binding transcriptional regulator
COORDINATES: protein motif:HMM:TIGR00228.1
GO:0008821 - crossover junction endodeoxyribonuclease activity [Evidence IEA]
GO:0006310 - DNA recombination [Evidence IEA]
crossover junction endodeoxyribonuclease RuvC
COORDINATES: protein motif:HMM:TIGR00084.1
GO:0009379 - Holliday junction helicase complex [Evidence IEA]
GO:0009378 - four-way junction helicase activity [Evidence IEA]
Holliday junction branch migration protein RuvA
COORDINATES: similar to AA sequence:RefSeq:WP_019924388.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0003677 - DNA binding [Evidence IEA]; GO:0009378 - four-way junction helicase activity [Evidence IEA]
Holliday junction branch migration DNA helicase RuvB
COORDINATES: protein motif:HMM:TIGR02799.1
GO:0047617 - acyl-CoA hydrolase activity [Evidence IEA]; GO:0005515 - protein binding [Evidence IEA]
tol-pal system-associated acyl-CoA thioesterase
COORDINATES: similar to AA sequence:RefSeq:WP_008446715.1
GO:1902600 - proton transmembrane transport [Evidence IEA]
GO:0098567 - periplasmic side of plasma membrane [Evidence IEA]
GO:0061024 - membrane organization [Evidence IEA]; GO:1902600 - proton transmembrane transport [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR02794.1
COORDINATES: protein motif:HMM:TIGR02800.1
Tol-Pal system beta propeller repeat protein TolB
COORDINATES: protein motif:HMM:TIGR02802.1
peptidoglycan-associated lipoprotein Pal
COORDINATES: protein motif:HMM:TIGR02795.1
COORDINATES: protein motif:HMM:NF017812.2
COORDINATES: similar to AA sequence:RefSeq:WP_040202349.1
COORDINATES: protein motif:HMM:NF012355.2
GO:0005507 - copper ion binding [Evidence IEA]; GO:0009055 - electron transfer activity [Evidence IEA]
plastocyanin/azurin family copper-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_000271409.1
COORDINATES: similar to AA sequence:RefSeq:WP_016328532.1
COORDINATES: protein motif:HMM:NF008954.0
GO:0005525 - GTP binding [Evidence IEA]; GO:0003924 - GTPase activity [Evidence IEA]; GO:0000287 - magnesium ion binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_020705194.1
GO:0004349 - glutamate 5-kinase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_018985500.1
GO:0003938 - IMP dehydrogenase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_010397678.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0003922 - GMP synthase (glutamine-hydrolyzing) activity [Evidence IEA]; GO:0016462 - pyrophosphatase activity [Evidence IEA]
GO:0006177 - GMP biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF033517.1
TnpB, as the term is used for proteins encoded by IS66 family insertion elements, is considered an accessory protein, since TnpC, encoded by a neighboring gene, is a DDE family transposase.; incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: protein motif:HMM:NF022898.2
type IV toxin-antitoxin system AbiEi family antitoxin domain-containing protein
COORDINATES: protein motif:HMM:NF020348.2
heme-binding beta-barrel domain-containing protein
COORDINATES: protein motif:HMM:NF023696.2
COORDINATES: protein motif:HMM:NF022665.2
COORDINATES: protein motif:HMM:NF015412.2
COORDINATES: protein motif:HMM:NF022603.2
COORDINATES: protein motif:HMM:NF001911.0
COORDINATES: protein motif:HMM:TIGR01479.1
GO:0004476 - mannose-6-phosphate isomerase activity [Evidence IEA]
GO:0009103 - lipopolysaccharide biosynthetic process [Evidence IEA]
mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase
COORDINATES: similar to AA sequence:RefSeq:WP_019112620.1
LysR substrate-binding domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_018986866.1
COORDINATES: protein motif:HMM:TIGR02504.1
GO:0004748 - ribonucleoside-diphosphate reductase activity, thioredoxin disulfide as acceptor [Evidence IEA]
adenosylcobalamin-dependent ribonucleoside-diphosphate reductase
COORDINATES: protein motif:HMM:NF024950.2
SDR family NAD(P)-dependent oxidoreductase
COORDINATES: protein motif:HMM:NF006550.0
GO:0003677 - DNA binding [Evidence IEA]; GO:0016987 - sigma factor activity [Evidence IEA]
GO:0006352 - DNA-templated transcription initiation [Evidence IEA]; GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
COORDINATES: protein motif:HMM:NF023699.2
COORDINATES: protein motif:HMM:NF022748.2
COORDINATES: protein motif:HMM:NF018028.2
COORDINATES: protein motif:HMM:NF015684.2
LPS export ABC transporter permease LptG
COORDINATES: similar to AA sequence:RefSeq:WP_019921630.1
GO:0003987 - acetate-CoA ligase activity [Evidence IEA]
GO:0019427 - acetyl-CoA biosynthetic process from acetate [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_019921628.1
COORDINATES: similar to AA sequence:RefSeq:WP_019920750.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0016887 - ATP hydrolysis activity [Evidence IEA]; GO:0003690 - double-stranded DNA binding [Evidence IEA]; GO:0005515 - protein binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_016537756.1
iron-sulfur cluster assembly accessory protein
COORDINATES: similar to AA sequence:RefSeq:WP_012536566.1
GO:0009001 - serine O-acetyltransferase activity [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00050.1
COORDINATES: protein motif:HMM:NF012673.2
COORDINATES: similar to AA sequence:RefSeq:WP_019920206.1
GO:0009332 - glutamate-tRNA ligase complex [Evidence IEA]
GO:0004818 - glutamate-tRNA ligase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF019619.2
COORDINATES: protein motif:HMM:NF024118.2
COORDINATES: protein motif:HMM:NF018509.2
outer membrane protein assembly factor BamC
COORDINATES: similar to AA sequence:RefSeq:WP_018986143.1
GO:0008840 - 4-hydroxy-tetrahydrodipicolinate synthase activity [Evidence IEA]
4-hydroxy-tetrahydrodipicolinate synthase
COORDINATES: protein motif:HMM:NF016228.2
GO:0008831 - dTDP-4-dehydrorhamnose reductase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011941644.1
GO:0008830 - dTDP-4-dehydrorhamnose 3,5-epimerase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004637345.1
COORDINATES: protein motif:HMM:TIGR01695.1
GO:0034204 - lipid translocation [Evidence IEA]; GO:0009252 - peptidoglycan biosynthetic process [Evidence IEA]
murein biosynthesis integral membrane protein MurJ
COORDINATES: protein motif:HMM:NF014035.2
sulfite exporter TauE/SafE family protein
COORDINATES: protein motif:HMM:NF009326.0
COORDINATES: similar to AA sequence:RefSeq:WP_019922886.1
bifunctional riboflavin kinase/FAD synthetase
COORDINATES: similar to AA sequence:RefSeq:WP_019922887.1
GO:0004822 - isoleucine-tRNA ligase activity [Evidence IEA]
GO:0006428 - isoleucyl-tRNA aminoacylation [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00077.1
GO:0004190 - aspartic-type endopeptidase activity [Evidence IEA]
GO:0009306 - protein secretion [Evidence IEA]; GO:0006508 - proteolysis [Evidence IEA]
COORDINATES: protein motif:HMM:NF002190.0
GO:0051745 - 4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase activity [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]
GO:0050992 - dimethylallyl diphosphate biosynthetic process [Evidence IEA]; GO:0019288 - isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway [Evidence IEA]
4-hydroxy-3-methylbut-2-enyl diphosphate reductase
COORDINATES: protein motif:HMM:NF013629.2
COORDINATES: similar to AA sequence:RefSeq:WP_013741765.1
COORDINATES: protein motif:HMM:NF002325.0
aspartate aminotransferase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_019924862.1
GO:0004585 - ornithine carbamoyltransferase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_019924861.1
GO:0004055 - argininosuccinate synthase activity [Evidence IEA]; GO:0005524 - ATP binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_015831915.1
YajQ family cyclic di-GMP-binding protein
COORDINATES: protein motif:HMM:NF009150.0
GO:0004518 - nuclease activity [Evidence IEA]; GO:0003676 - nucleic acid binding [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00096.1
GO:0008649 - rRNA methyltransferase activity [Evidence IEA]; GO:0008757 - S-adenosylmethionine-dependent methyltransferase activity [Evidence IEA]
GO:0000451 - rRNA 2'-O-methylation [Evidence IEA]
16S rRNA (cytidine(1402)-2'-O)-methyltransferase
COORDINATES: protein motif:HMM:NF010546.0
GO:0097367 - carbohydrate derivative binding [Evidence IEA]; GO:0008968 - D-sedoheptulose 7-phosphate isomerase activity [Evidence IEA]
GO:1901135 - carbohydrate derivative metabolic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF013621.2
adenylyltransferase/cytidyltransferase family protein
COORDINATES: protein motif:HMM:TIGR00671.1
GO:0004594 - pantothenate kinase activity [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00121.1
GO:0004077 - biotin-[acetyl-CoA-carboxylase] ligase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_019921690.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0004819 - glutamine-tRNA ligase activity [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]
GO:0006425 - glutaminyl-tRNA aminoacylation [Evidence IEA]
glutamine--tRNA ligase/YqeY domain fusion protein
COORDINATES: similar to AA sequence:RefSeq:WP_012536877.1
GO:0003933 - GTP cyclohydrolase activity [Evidence IEA]
GO:0035998 - 7,8-dihydroneopterin 3'-triphosphate biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_019924655.1
GO:0008661 - 1-deoxy-D-xylulose-5-phosphate synthase activity [Evidence IEA]
GO:0009240 - isopentenyl diphosphate biosynthetic process [Evidence IEA]; GO:0008615 - pyridoxine biosynthetic process [Evidence IEA]; GO:0009228 - thiamine biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR01280.1
COORDINATES: similar to AA sequence:RefSeq:WP_017879309.1
aromatic ring-hydroxylating dioxygenase subunit alpha
COORDINATES: similar to AA sequence:RefSeq:WP_005606737.1
COORDINATES: protein motif:HMM:TIGR02273.1
Essential for efficient processing of 16S rRNA; Essential for efficient processing of 16S rRNA; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_008446021.1
GO:0052906 - tRNA (guanine(37)-N(1))-methyltransferase activity [Evidence IEA]
tRNA (guanosine(37)-N1)-methyltransferase TrmD
COORDINATES: similar to AA sequence:RefSeq:WP_018987475.1
COORDINATES: similar to AA sequence:RefSeq:WP_019924599.1
GO:0009009 - site-specific recombinase activity [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00023.1
GO:0008374 - O-acyltransferase activity [Evidence IEA]
GO:0006654 - phosphatidic acid biosynthetic process [Evidence IEA]
glycerol-3-phosphate 1-O-acyltransferase PlsY
COORDINATES: protein motif:HMM:NF022995.2
bifunctional diguanylate cyclase/phosphodiesterase
COORDINATES: protein motif:HMM:NF039346.1
COORDINATES: protein motif:HMM:TIGR02917.1
PEP-CTERM system TPR-repeat protein PrsT
COORDINATES: protein motif:HMM:TIGR03100.1
hydrolase 1, exosortase A system-associated
COORDINATES: protein motif:HMM:TIGR03101.1
hydrolase 2, exosortase A system-associated
COORDINATES: similar to AA sequence:RefSeq:WP_012607077.1
COORDINATES: protein motif:HMM:NF040493.1
type II toxin-antitoxin system VapB family antitoxin
PEP-CTERM proteins occur, often in large numbers, in the proteomes of bacteria that also encode an exosortase, a predicted intramembrane cysteine proteinase. The presence of a PEP-CTERM domain at a protein's C-terminus predicts cleavage within the sorting domain, followed by covalent anchoring to some some component of the (usually Gram-negative) cell surface. Many PEP-CTERM proteins exhibit an unusual sequence composition that includes large numbers of potential glycosylation sites. Expression of one such protein has been shown restore the ability of a bacterium to form floc, a type of biofilm.; PEP-CTERM proteins occur, often in large numbers, in the proteomes of bacteria that also encode an exosortase, a predicted intramembrane cysteine proteinase. The presence of a PEP-CTERM domain at a protein's C-terminus predicts cleavage within the sorting domain, followed by covalent anchoring to some some component of the (usually Gram-negative) cell surface. Many PEP-CTERM proteins exhibit an unusual sequence composition that includes large numbers of potential glycosylation sites. Expression of one such protein has been shown restore the ability of a bacterium to form floc, a type of biofilm.; PEP-CTERM proteins occur, often in large numbers, in the proteomes of bacteria that also encode an exosortase, a predicted intramembrane cysteine proteinase. The presence of a PEP-CTERM domain at a protein's C-terminus predicts cleavage within the sorting domain, followed by covalent anchoring to some some component of the (usually Gram-negative) cell surface. Many PEP-CTERM proteins exhibit an unusual sequence composition that includes large numbers of potential glycosylation sites. Expression of one such protein has been shown restore the ability of a bacterium to form floc, a type of biofilm; Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
COORDINATES: similar to AA sequence:RefSeq:WP_019922633.1
COORDINATES: protein motif:HMM:TIGR00305.1
COORDINATES: similar to AA sequence:RefSeq:WP_015472933.1
COORDINATES: protein motif:HMM:NF025189.2
COORDINATES: protein motif:HMM:TIGR03097.1
putative O-glycosylation ligase, exosortase A system-associated
COORDINATES: protein motif:HMM:NF015630.2
type II toxin-antitoxin system HicB family antitoxin
COORDINATES: protein motif:HMM:NF012744.2
COORDINATES: protein motif:HMM:NF024806.2
COORDINATES: protein motif:HMM:NF004035.0
GO:0006790 - sulfur compound metabolic process [Evidence IEA]
sulfate adenylyltransferase subunit CysN
COORDINATES: protein motif:HMM:NF009214.0
COORDINATES: protein motif:HMM:TIGR01331.1
GO:0008441 - 3'(2'),5'-bisphosphate nucleotidase activity [Evidence IEA]
3'(2'),5'-bisphosphate nucleotidase CysQ
COORDINATES: protein motif:HMM:NF021616.2
COORDINATES: protein motif:HMM:NF018696.2
COORDINATES: protein motif:HMM:NF024832.2
COORDINATES: protein motif:HMM:NF025024.2
COORDINATES: protein motif:HMM:NF024993.2
frameshifted; incomplete; partial in the middle of a contig; missing N-terminus and C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: protein motif:HMM:NF021253.2
COORDINATES: similar to AA sequence:RefSeq:WP_011938033.1
COORDINATES: similar to AA sequence:RefSeq:WP_011287964.1
COORDINATES: protein motif:HMM:NF014021.2
COORDINATES: protein motif:HMM:TIGR01439.1
AbrB/MazE/SpoVT family DNA-binding domain-containing protein
COORDINATES: protein motif:HMM:NF013561.2
COORDINATES: protein motif:HMM:TIGR04063.1
glycosyltransferase, exosortase A system-associated
COORDINATES: protein motif:HMM:TIGR03108.1
GO:0004066 - asparagine synthase (glutamine-hydrolyzing) activity [Evidence IEA]
GO:0006529 - asparagine biosynthetic process [Evidence IEA]
amidotransferase 1, exosortase A system-associated
COORDINATES: protein motif:HMM:NF024810.2
COORDINATES: protein motif:HMM:NF014724.2
COORDINATES: protein motif:HMM:NF013094.2
GO:0008641 - ubiquitin-like modifier activating enzyme activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF006077.0
COORDINATES: similar to AA sequence:RefSeq:WP_019922560.1
COORDINATES: protein motif:HMM:NF013736.2
COORDINATES: protein motif:HMM:TIGR02595.1
COORDINATES: similar to AA sequence:RefSeq:WP_011408759.1
COORDINATES: similar to AA sequence:RefSeq:WP_001136729.1
COORDINATES: protein motif:HMM:NF023093.2
type II toxin-antitoxin system YhaV family toxin
COORDINATES: protein motif:HMM:TIGR03088.1
TIGR03088 family PEP-CTERM/XrtA system glycosyltransferase
COORDINATES: protein motif:HMM:TIGR03109.1
GO:0004197 - cysteine-type endopeptidase activity [Evidence IEA]
GO:0043687 - post-translational protein modification [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR03087.1
TIGR03087 family PEP-CTERM/XrtA system glycosyltransferase
COORDINATES: protein motif:HMM:TIGR03019.1
FemAB family PEP-CTERM system-associated protein
COORDINATES: protein motif:HMM:TIGR03006.1
COORDINATES: protein motif:HMM:TIGR00236.1
GO:0008761 - UDP-N-acetylglucosamine 2-epimerase activity [Evidence IEA]
UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing)
COORDINATES: protein motif:HMM:TIGR03015.1
COORDINATES: protein motif:HMM:TIGR03016.1
TIGR03016 family PEP-CTERM system-associated outer membrane protein
COORDINATES: protein motif:HMM:TIGR03018.1
COORDINATES: protein motif:HMM:TIGR03007.1
COORDINATES: protein motif:HMM:TIGR03027.1
COORDINATES: protein motif:HMM:TIGR03025.1
TIGR03013 family PEP-CTERM/XrtA system glycosyltransferase
COORDINATES: protein motif:HMM:TIGR03098.1
acyl-CoA ligase (AMP-forming), exosortase A system-associated
COORDINATES: protein motif:HMM:NF012318.2
COORDINATES: protein motif:HMM:TIGR02915.1
PEP-CTERM-box response regulator transcription factor
COORDINATES: protein motif:HMM:TIGR02916.1
GO:0000155 - phosphorelay sensor kinase activity [Evidence IEA]; GO:0004673 - protein histidine kinase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF024871.2
COORDINATES: protein motif:HMM:NF013227.2
DegT/DnrJ/EryC1/StrS family aminotransferase
COORDINATES: similar to AA sequence:RefSeq:WP_013634985.1
COORDINATES: similar to AA sequence:RefSeq:WP_004636790.1
COORDINATES: similar to AA sequence:RefSeq:WP_019923871.1
aminodeoxychorismate/anthranilate synthase component II
COORDINATES: protein motif:HMM:NF012616.2
GO:0000179 - rRNA (adenine-N6,N6-)-dimethyltransferase activity [Evidence IEA]
16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))- dimethyltransferase RsmA
COORDINATES: similar to AA sequence:RefSeq:WP_015572650.1
GO:0050570 - 4-hydroxythreonine-4-phosphate dehydrogenase activity [Evidence IEA]
4-hydroxythreonine-4-phosphate dehydrogenase PdxA
COORDINATES: protein motif:HMM:NF020872.2
COORDINATES: protein motif:HMM:NF016348.2
GO:0061024 - membrane organization [Evidence IEA]; GO:0010033 - response to organic substance [Evidence IEA]
COORDINATES: protein motif:HMM:NF013775.2
COORDINATES: protein motif:HMM:NF008131.0
COORDINATES: protein motif:HMM:TIGR01988.1
COORDINATES: protein motif:HMM:NF024498.2
COORDINATES: protein motif:HMM:TIGR00608.1
COORDINATES: protein motif:HMM:NF012424.2
COORDINATES: similar to AA sequence:RefSeq:WP_001738005.1
COORDINATES: protein motif:HMM:NF001489.0
GO:0008252 - nucleotidase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF001453.0
GO:0004719 - protein-L-isoaspartate (D-aspartate) O-methyltransferase activity [Evidence IEA]
protein-L-isoaspartate(D-aspartate) O-methyltransferase
COORDINATES: protein motif:HMM:NF013700.2
COORDINATES: protein motif:HMM:NF016326.2
COORDINATES: protein motif:HMM:NF006033.0
GO:0003824 - catalytic activity [Evidence IEA]; GO:0030170 - pyridoxal phosphate binding [Evidence IEA]
COORDINATES: protein motif:HMM:NF004976.0
COORDINATES: protein motif:HMM:TIGR00260.1
GO:0004795 - threonine synthase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF016236.2
COORDINATES: similar to AA sequence:RefSeq:WP_003849026.1
COORDINATES: protein motif:HMM:TIGR01524.1
GO:0015444 - P-type magnesium transporter activity [Evidence IEA]
GO:0015693 - magnesium ion transport [Evidence IEA]
COORDINATES: protein motif:HMM:NF007005.1
two-component system response regulator OmpR
COORDINATES: protein motif:HMM:TIGR00758.1
COORDINATES: protein motif:HMM:TIGR01575.1
GO:0008999 - peptide-alanine-alpha-N-acetyltransferase activity [Evidence IEA]
GO:0036211 - protein modification process [Evidence IEA]; GO:0042254 - ribosome biogenesis [Evidence IEA]
ribosomal protein S18-alanine N-acetyltransferase
COORDINATES: protein motif:HMM:TIGR03725.1
GO:0003725 - double-stranded RNA binding [Evidence IEA]
tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex dimerization subunit type 1 TsaB
COORDINATES: protein motif:HMM:NF008397.0
COORDINATES: similar to AA sequence:RefSeq:WP_019883524.1
COORDINATES: similar to AA sequence:RefSeq:WP_016448881.1
GO:0006950 - response to stress [Evidence IEA]; GO:0006412 - translation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_019922368.1
COORDINATES: similar to AA sequence:RefSeq:WP_018985910.1
COORDINATES: protein motif:HMM:TIGR00858.1
GO:0008710 - 8-amino-7-oxononanoate synthase activity [Evidence IEA]
GO:0009102 - biotin biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00508.1
GO:0004015 - adenosylmethionine-8-amino-7-oxononanoate transaminase activity [Evidence IEA]
adenosylmethionine--8-amino-7-oxononanoate transaminase
COORDINATES: protein motif:HMM:NF024891.2
GO:0004141 - dethiobiotin synthase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF012686.2
COORDINATES: similar to AA sequence:RefSeq:WP_007877043.1
COORDINATES: protein motif:HMM:NF021493.2
pilus assembly protein TadG-related protein
COORDINATES: protein motif:HMM:NF019428.2
COORDINATES: similar to AA sequence:RefSeq:WP_006022733.1
COORDINATES: protein motif:HMM:TIGR03177.1
COORDINATES: protein motif:HMM:NF012485.2
type II and III secretion system protein family protein
COORDINATES: similar to AA sequence:RefSeq:WP_019923906.1
COORDINATES: protein motif:HMM:NF012694.2
type II secretion system F family protein
COORDINATES: protein motif:HMM:NF021134.2
antitoxin of toxin-antitoxin stability system
COORDINATES: similar to AA sequence:RefSeq:WP_011236060.1
COORDINATES: protein motif:HMM:NF007386.0
COORDINATES: protein motif:HMM:NF013753.2
COORDINATES: similar to AA sequence:RefSeq:WP_012540079.1
GO:0008080 - N-acetyltransferase activity [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00614.1
COORDINATES: similar to AA sequence:RefSeq:WP_018985583.1
GO:0004616 - phosphogluconate dehydrogenase (decarboxylating) activity [Evidence IEA]
decarboxylating 6-phosphogluconate dehydrogenase
COORDINATES: protein motif:HMM:TIGR00871.1
GO:0004345 - glucose-6-phosphate dehydrogenase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF013356.2
GO:0017057 - 6-phosphogluconolactonase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF004226.0
GO:0008408 - 3'-5' exonuclease activity [Evidence IEA]; GO:0003676 - nucleic acid binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_019921099.1
GO:0008251 - tRNA-specific adenosine deaminase activity [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA]
GO:0002100 - tRNA wobble adenosine to inosine editing [Evidence IEA]
COORDINATES: protein motif:HMM:NF001100.0
GO:0005524 - ATP binding [Evidence IEA]; GO:0004825 - methionine-tRNA ligase activity [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]
COORDINATES: protein motif:HMM:NF008669.0
GO:0005524 - ATP binding [Evidence IEA]; GO:0016887 - ATP hydrolysis activity [Evidence IEA]; GO:0051536 - iron-sulfur cluster binding [Evidence IEA]
iron-sulfur cluster carrier protein ApbC
COORDINATES: similar to AA sequence:RefSeq:WP_019881948.1
GO:0008829 - dCTP deaminase activity [Evidence IEA]
GO:0009394 - 2'-deoxyribonucleotide metabolic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF017094.2
GO:0044780 - bacterial-type flagellum assembly [Evidence IEA]; GO:0045893 - positive regulation of DNA-templated transcription [Evidence IEA]
COORDINATES: protein motif:HMM:NF017124.2
COORDINATES: protein motif:HMM:NF021897.2
type IV secretion system DNA-binding domain-containing protein
COORDINATES: protein motif:HMM:NF012791.2
COORDINATES: similar to AA sequence:RefSeq:WP_003149828.1
COORDINATES: similar to AA sequence:RefSeq:WP_011633191.1
DsbE family thiol:disulfide interchange protein
COORDINATES: protein motif:HMM:NF015853.2
cytochrome c-type biogenesis protein CcmH
COORDINATES: protein motif:HMM:TIGR03142.1
GO:0051082 - unfolded protein binding [Evidence IEA]
c-type cytochrome biogenesis protein CcmI
COORDINATES: protein motif:HMM:NF010061.0
GO:0005524 - ATP binding [Evidence IEA]; GO:0022857 - transmembrane transporter activity [Evidence IEA]
cytochrome c biogenesis heme-transporting ATPase CcmA
COORDINATES: similar to AA sequence:RefSeq:WP_003149819.1
GO:0015232 - heme transmembrane transporter activity [Evidence IEA]
GO:0015886 - heme transport [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_020204484.1
COORDINATES: protein motif:HMM:TIGR03141.1
GO:0017004 - cytochrome complex assembly [Evidence IEA]; GO:0015886 - heme transport [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_020204483.1
GO:0017004 - cytochrome complex assembly [Evidence IEA]; GO:0017003 - protein-heme linkage [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_019882300.1
COORDINATES: similar to AA sequence:RefSeq:WP_019920224.1
GO:0006935 - chemotaxis [Evidence IEA]; GO:0007165 - signal transduction [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_018985225.1
COORDINATES: similar to AA sequence:RefSeq:WP_019921640.1
COORDINATES: similar to AA sequence:RefSeq:WP_019920221.1
COORDINATES: protein motif:HMM:NF010013.0
GO:0050568 - protein-glutamine glutaminase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF001965.0
chemotaxis response regulator protein-glutamate methylesterase
COORDINATES: protein motif:HMM:NF016156.2
COORDINATES: protein motif:HMM:NF023352.2
COORDINATES: protein motif:HMM:NF022458.2
COORDINATES: protein motif:HMM:NF018455.2
COORDINATES: protein motif:HMM:NF013180.2
GGDEF domain-containing phosphodiesterase
COORDINATES: protein motif:HMM:NF013324.2
COORDINATES: protein motif:HMM:NF016999.2
COORDINATES: protein motif:HMM:NF014090.2
COORDINATES: protein motif:HMM:TIGR01494.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0016887 - ATP hydrolysis activity [Evidence IEA]; GO:0005215 - transporter activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_019965835.1
circularly permuted type 2 ATP-grasp protein
COORDINATES: protein motif:HMM:NF016086.2
COORDINATES: similar to AA sequence:RefSeq:WP_019922244.1
COORDINATES: protein motif:HMM:NF013961.2
COORDINATES: similar to AA sequence:RefSeq:WP_019922245.1
COORDINATES: protein motif:HMM:NF014860.2
COORDINATES: similar to AA sequence:RefSeq:WP_011886397.1
COORDINATES: similar to AA sequence:RefSeq:WP_011886398.1
COORDINATES: similar to AA sequence:RefSeq:WP_003272088.1
COORDINATES: similar to AA sequence:RefSeq:WP_019920249.1
COORDINATES: protein motif:HMM:NF024701.2
COORDINATES: protein motif:HMM:NF025607.2
COORDINATES: protein motif:HMM:NF021538.2
COORDINATES: protein motif:HMM:NF024109.2
COORDINATES: protein motif:HMM:NF015400.2
saccharopine dehydrogenase NADP-binding domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_014028940.1
COORDINATES: similar to AA sequence:RefSeq:WP_009238012.1
COORDINATES: protein motif:HMM:NF019498.2
COORDINATES: similar to AA sequence:RefSeq:WP_011886417.1
internal stop; incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: protein motif:HMM:NF024706.2
COORDINATES: protein motif:HMM:NF012296.2
GO:0020037 - heme binding [Evidence IEA]; GO:0005506 - iron ion binding [Evidence IEA]; GO:0016705 - oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012606575.1
COORDINATES: similar to AA sequence:RefSeq:WP_016627252.1
COORDINATES: protein motif:HMM:NF017727.2
COORDINATES: protein motif:HMM:NF012780.2
COORDINATES: similar to AA sequence:RefSeq:WP_012206011.1
COORDINATES: protein motif:HMM:NF024867.2
COORDINATES: protein motif:HMM:TIGR02646.1
COORDINATES: similar to AA sequence:RefSeq:WP_016387099.1
COORDINATES: protein motif:HMM:NF012570.2
COORDINATES: protein motif:HMM:NF013401.2
COORDINATES: nucleotide motif:Rfam:14.4:RF01734
Fluoride riboswitches increase expression of downstream genes that help mitigate the toxic effects of very high levels of fluoride; They are found in a wide variety of bacteria and archaea; Derived by automated computational analysis using gene prediction method: cmsearch.
COORDINATES: protein motif:HMM:NF024734.2
COORDINATES: protein motif:HMM:NF014044.2
COORDINATES: similar to AA sequence:RefSeq:WP_023524285.1
COORDINATES: similar to AA sequence:RefSeq:WP_013374977.1
COORDINATES: similar to AA sequence:RefSeq:WP_003454727.1
COORDINATES: similar to AA sequence:RefSeq:WP_003454724.1
COORDINATES: protein motif:HMM:TIGR04435.1
restriction system-associated AAA family ATPase
COORDINATES: protein motif:HMM:NF037510.2
COORDINATES: protein motif:HMM:NF016232.2
COORDINATES: protein motif:HMM:NF024139.2
COORDINATES: protein motif:HMM:NF024939.2
COORDINATES: protein motif:HMM:NF013073.2
COORDINATES: protein motif:HMM:TIGR02218.1
COORDINATES: protein motif:HMM:NF012829.2
ParB N-terminal domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_008648927.1
COORDINATES: protein motif:HMM:NF002019.0
4a-hydroxytetrahydrobiopterin dehydratase
COORDINATES: protein motif:HMM:NF017885.2
COORDINATES: similar to AA sequence:RefSeq:WP_019922970.1
GO:0008961 - phosphatidylglycerol-prolipoprotein diacylglyceryl transferase activity [Evidence IEA]
prolipoprotein diacylglyceryl transferase
COORDINATES: similar to AA sequence:RefSeq:WP_018986236.1
COORDINATES: protein motif:HMM:NF024850.2
branched-chain amino acid ABC transporter substrate-binding protein
COORDINATES: protein motif:HMM:NF006565.0
COORDINATES: similar to AA sequence:RefSeq:WP_016450861.1
NAD-dependent epimerase/dehydratase family protein
COORDINATES: protein motif:HMM:NF015953.2
COORDINATES: protein motif:HMM:NF024831.2
COORDINATES: similar to AA sequence:RefSeq:WP_019922910.1
COORDINATES: protein motif:HMM:NF041023.1
COORDINATES: protein motif:HMM:NF008758.0
1,6-anhydro-N-acetylmuramyl-L-alanine amidase AmpD
COORDINATES: protein motif:HMM:NF006942.0
GO:0008746 - NAD(P)+ transhydrogenase activity [Evidence IEA]
Re/Si-specific NAD(P)(+) transhydrogenase subunit alpha
COORDINATES: similar to AA sequence:RefSeq:WP_019923651.1
GO:0008750 - NAD(P)+ transhydrogenase (AB-specific) activity [Evidence IEA]; GO:0050661 - NADP binding [Evidence IEA]
Re/Si-specific NAD(P)(+) transhydrogenase subunit beta
COORDINATES: protein motif:HMM:NF015862.2
COORDINATES: protein motif:HMM:TIGR03837.1
GO:0106361 - protein-arginine rhamnosyltransferase activity [Evidence IEA]
elongation factor P maturation arginine rhamnosyltransferase EarP
COORDINATES: similar to AA sequence:RefSeq:WP_020182242.1
COORDINATES: protein motif:HMM:NF012958.2
COORDINATES: protein motif:HMM:NF001933.0
COORDINATES: similar to AA sequence:RefSeq:WP_004749952.1
GO:0004427 - inorganic diphosphate phosphatase activity [Evidence IEA]
GO:0006796 - phosphate-containing compound metabolic process [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00433.2
GO:0051537 - 2 iron, 2 sulfur cluster binding [Evidence IEA]; GO:0051539 - 4 iron, 4 sulfur cluster binding [Evidence IEA]; GO:0004076 - biotin synthase activity [Evidence IEA]; GO:1904047 - S-adenosyl-L-methionine binding [Evidence IEA]
COORDINATES: protein motif:HMM:NF012383.2
GO:0009116 - nucleoside metabolic process [Evidence IEA]
phosphoribosyltransferase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_000932331.1
tRNA (cytidine(34)-2'-O)-methyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_019924696.1
NAD(P)H-dependent glycerol-3-phosphate dehydrogenase
COORDINATES: similar to AA sequence:RefSeq:WP_019924698.1
COORDINATES: similar to AA sequence:RefSeq:WP_017458192.1
GO:0015036 - disulfide oxidoreductase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF012933.2
COORDINATES: similar to AA sequence:RefSeq:WP_000301556.1
GO:0004619 - phosphoglycerate mutase activity [Evidence IEA]
2,3-diphosphoglycerate-dependent phosphoglycerate mutase
peptidoglycan DD-metalloendopeptidase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_018987644.1
COORDINATES: similar to AA sequence:RefSeq:WP_019924704.1
COORDINATES: similar to AA sequence:RefSeq:WP_008451884.1
tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD
COORDINATES: protein motif:HMM:NF023363.2
COORDINATES: protein motif:HMM:NF038213.1
COORDINATES: similar to AA sequence:RefSeq:WP_019922669.1
GO:0003862 - 3-isopropylmalate dehydrogenase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF005144.0
GO:0004073 - aspartate-semialdehyde dehydrogenase activity [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00071.1
COORDINATES: protein motif:HMM:NF012900.2
GO:0004640 - phosphoribosylanthranilate isomerase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_019922651.1
GO:0004834 - tryptophan synthase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF012511.2
COORDINATES: similar to AA sequence:RefSeq:WP_019922648.1
acetyl-CoA carboxylase, carboxyltransferase subunit beta
COORDINATES: protein motif:HMM:NF014704.2
COORDINATES: similar to AA sequence:RefSeq:WP_018985140.1
GO:0004044 - amidophosphoribosyltransferase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_007115921.1
GO:0071268 - homocysteine biosynthetic process [Evidence IEA]; GO:0019346 - transsulfuration [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_018985423.1
COORDINATES: similar to AA sequence:RefSeq:WP_018985421.1
GO:0045861 - negative regulation of proteolysis [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_019882151.1
COORDINATES: protein motif:HMM:NF021366.2
COORDINATES: protein motif:HMM:NF009086.0
ATP phosphoribosyltransferase regulatory subunit
COORDINATES: similar to AA sequence:RefSeq:WP_003690856.1
GO:0004019 - adenylosuccinate synthase activity [Evidence IEA]; GO:0005525 - GTP binding [Evidence IEA]
COORDINATES: protein motif:HMM:NF012722.2
histidine kinase dimerization/phospho-acceptor domain-containing protein
COORDINATES: protein motif:HMM:TIGR02063.1
GO:0008997 - ribonuclease R activity [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00186.1
GO:0009451 - RNA modification [Evidence IEA]
23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB
COORDINATES: similar to AA sequence:RefSeq:WP_018678121.1
COORDINATES: protein motif:HMM:TIGR04418.1
GO:0006269 - DNA replication, synthesis of RNA primer [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012249960.1
COORDINATES: similar to AA sequence:RefSeq:WP_005229629.1
COORDINATES: similar to AA sequence:RefSeq:WP_018985608.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0003677 - DNA binding [Evidence IEA]; GO:0003678 - DNA helicase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_001399683.1
COORDINATES: protein motif:HMM:NF012334.2
COORDINATES: protein motif:HMM:NF039406.1
COORDINATES: protein motif:HMM:NF005086.0
COORDINATES: protein motif:HMM:NF012373.2
COORDINATES: protein motif:HMM:NF005045.0
COORDINATES: protein motif:HMM:NF012566.2
GO:0051536 - iron-sulfur cluster binding [Evidence IEA]; GO:0008137 - NADH dehydrogenase (ubiquinone) activity [Evidence IEA]; GO:0048038 - quinone binding [Evidence IEA]
NADH-quinone oxidoreductase subunit NuoB
COORDINATES: protein motif:HMM:NF015087.2
GO:0016051 - carbohydrate biosynthetic process [Evidence IEA]
N-acetylneuraminate synthase family protein
COORDINATES: protein motif:HMM:NF014411.2
GO:0006047 - UDP-N-acetylglucosamine metabolic process [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR02093.1
glycogen/starch/alpha-glucan phosphorylase
COORDINATES: protein motif:HMM:NF003348.0
GO:0008495 - protoheme IX farnesyltransferase activity [Evidence IEA]
GO:0048034 - heme O biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR02847.1
GO:0009486 - cytochrome bo3 ubiquinol oxidase activity [Evidence IEA]
GO:0015990 - electron transport coupled proton transport [Evidence IEA]
cytochrome o ubiquinol oxidase subunit IV
COORDINATES: protein motif:HMM:NF012720.2
cytochrome o ubiquinol oxidase subunit III
COORDINATES: similar to AA sequence:RefSeq:WP_002119744.1
cytochrome o ubiquinol oxidase subunit I
COORDINATES: protein motif:HMM:TIGR01433.1
COORDINATES: nucleotide motif:Rfam:14.4:RF00174
cobalamin riboswitch; Derived by automated computational analysis using gene prediction method: cmsearch.
COORDINATES: protein motif:HMM:NF014007.2
energy-coupling factor ABC transporter permease
COORDINATES: protein motif:HMM:TIGR01465.1
GO:0046026 - precorrin-4 C11-methyltransferase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF014612.2
COORDINATES: protein motif:HMM:NF000849.0
cobalt-precorrin-5B (C(1))-methyltransferase
COORDINATES: protein motif:HMM:TIGR02467.1
GO:0046025 - precorrin-6Y C5,15-methyltransferase (decarboxylating) activity [Evidence IEA]
GO:0046140 - corrin biosynthetic process [Evidence IEA]
precorrin-6y C5,15-methyltransferase (decarboxylating) subunit CbiE
COORDINATES: protein motif:HMM:TIGR01467.1
GO:0030788 - precorrin-2 C20-methyltransferase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF023189.2
cobalamin biosynthesis central domain-containing protein
COORDINATES: protein motif:HMM:NF014006.2
COORDINATES: protein motif:HMM:TIGR01466.1
GO:0030789 - precorrin-3B C17-methyltransferase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF013426.2
NAD(P)H-dependent oxidoreductase subunit E
COORDINATES: protein motif:HMM:NF023299.2
COORDINATES: similar to AA sequence:RefSeq:WP_019882221.1
GO:0004801 - transaldolase activity [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00013.1
COORDINATES: protein motif:HMM:NF004208.0
GO:0003700 - DNA-binding transcription factor activity [Evidence IEA]; GO:0016987 - sigma factor activity [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR01391.1
COORDINATES: similar to AA sequence:RefSeq:WP_011484193.1
COORDINATES: protein motif:HMM:NF033749.1
COORDINATES: protein motif:HMM:TIGR00705.1
GO:0006508 - proteolysis [Evidence IEA]; GO:0006465 - signal peptide processing [Evidence IEA]
COORDINATES: protein motif:HMM:NF017913.2
phosphate-starvation-inducible PsiE family protein
COORDINATES: protein motif:HMM:NF013179.2
COORDINATES: similar to AA sequence:RefSeq:WP_019922482.1
COORDINATES: protein motif:HMM:TIGR00538.1
oxygen-independent coproporphyrinogen III oxidase
COORDINATES: protein motif:HMM:TIGR04416.1
GO:0003964 - RNA-directed DNA polymerase activity [Evidence IEA]
GO:0000373 - Group II intron splicing [Evidence IEA]
group II intron reverse transcriptase/maturase
COORDINATES: protein motif:HMM:NF004677.0
GO:0005524 - ATP binding [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0004638 - phosphoribosylaminoimidazole carboxylase activity [Evidence IEA]
GO:0006189 - 'de novo' IMP biosynthetic process [Evidence IEA]
5-(carboxyamino)imidazole ribonucleotide synthase
COORDINATES: protein motif:HMM:TIGR01162.1
GO:0009320 - phosphoribosylaminoimidazole carboxylase complex [Evidence IEA]
GO:0004638 - phosphoribosylaminoimidazole carboxylase activity [Evidence IEA]
5-(carboxyamino)imidazole ribonucleotide mutase
COORDINATES: protein motif:HMM:NF008872.0
bifunctional UDP-4-keto-pentose/UDP-xylose synthase
COORDINATES: protein motif:HMM:NF005414.0
GO:0016742 - hydroxymethyl-, formyl- and related transferase activity [Evidence IEA]
DegT/DnrJ/EryC1/StrS aminotransferase family protein
COORDINATES: protein motif:HMM:NF013089.2
COORDINATES: similar to AA sequence:RefSeq:WP_019922037.1
GO:0004791 - thioredoxin-disulfide reductase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_019922038.1
COORDINATES: protein motif:HMM:NF015510.2
outer membrane lipoprotein chaperone LolA
COORDINATES: protein motif:HMM:TIGR00526.1
COORDINATES: similar to AA sequence:RefSeq:WP_019924581.1
COORDINATES: protein motif:HMM:NF013431.2
COORDINATES: similar to AA sequence:RefSeq:WP_019920123.1
GO:0015385 - sodium:proton antiporter activity [Evidence IEA]
GO:1902600 - proton transmembrane transport [Evidence IEA]; GO:0006814 - sodium ion transport [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR02660.1
GO:0004410 - homocitrate synthase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_010645784.1
COORDINATES: protein motif:HMM:NF016226.2
COORDINATES: similar to AA sequence:RefSeq:WP_012536587.1
COORDINATES: protein motif:HMM:TIGR02934.1
COORDINATES: protein motif:HMM:NF023272.2
COORDINATES: protein motif:HMM:NF012375.2
COORDINATES: protein motif:HMM:TIGR01285.1
nitrogenase iron-molybdenum cofactor biosynthesis protein NifN
COORDINATES: protein motif:HMM:TIGR02663.1
GO:0051540 - metal cluster binding [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR02936.1
COORDINATES: protein motif:HMM:NF016762.2
GO:0030151 - molybdenum ion binding [Evidence IEA]
COORDINATES: protein motif:HMM:NF013200.2
electron transfer flavoprotein subunit alpha/FixB family protein
COORDINATES: protein motif:HMM:NF002009.0
nitrogenase-stabilizing/protective protein NifW
COORDINATES: similar to AA sequence:RefSeq:WP_014833873.1
COORDINATES: protein motif:HMM:TIGR01980.1
COORDINATES: similar to AA sequence:RefSeq:WP_002503432.1
COORDINATES: similar to AA sequence:RefSeq:WP_016632038.1
COORDINATES: protein motif:HMM:NF020295.2
COORDINATES: protein motif:HMM:TIGR01817.1
GO:0009399 - nitrogen fixation [Evidence IEA]; GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
nif-specific transcriptional activator NifA
COORDINATES: protein motif:HMM:TIGR01290.1
nitrogenase cofactor biosynthesis protein NifB
COORDINATES: protein motif:HMM:NF024634.2
COORDINATES: protein motif:HMM:TIGR00049.1
COORDINATES: protein motif:HMM:NF017312.2
4Fe4S-binding leucine-rich repeat protein
COORDINATES: similar to AA sequence:RefSeq:WP_012536586.1
COORDINATES: protein motif:HMM:TIGR02605.1
COORDINATES: protein motif:HMM:NF024206.2
ankyrin repeat domain-containing protein
COORDINATES: protein motif:HMM:TIGR01616.1