Rippkaea orientalis PCC 8801 plasmid pP880103, complete sequence.
type: Entry
definition: Rippkaea orientalis PCC 8801 plasmid pP880103, complete sequence.
sequence version: NC_011727.1
sequence date: 2023-04-03
sequence: sequence
division: CON
label: NC_011727.1
type: RefSeq
SIO_000068: refseq
dblink: PRJNA224116
dblink: SAMN00000280
keyword: RefSeq
source: Rippkaea orientalis PCC 8801
organism: Rippkaea orientalis PCC 8801
taxonomy: Bacteria; Cyanobacteriota; Cyanophyceae; Oscillatoriophycideae; Chroococcales; Aphanothecaceae; Rippkaea; Rippkaea orientalis.
reference: 1
reference: 2
comment: REFSEQ INFORMATION: The reference sequence is identical to\nCP001290.1.\nURL -- http://www.jgi.doe.gov\nJGI Project ID: 4024134\nSource DNA and bacteria available from Himadri Pakrasi\n(pakrasi@biology2.wustl.edu)\nContacts: Himadri Pakrasi (pakrasi@biology2.wustl.edu)\n David Bruce (microbe@cuba.jgi-psf.org)\nAnnotation done by JGI-ORNL and JGI-PGF\nFinishing done by JGI-LANL\nFinished microbial genomes have been curated to close all gaps with\ngreater than 98% coverage of at least two independent clones. Each\nbase pair has a minimum q (quality) value of 30 and the total error\nrate is less than one per 50000.\nThe JGI and collaborators endorse the principles for the\ndistribution and use of large scale sequencing data adopted by the\nlarger genome sequencing community and urge users of this data to\nfollow them. it is our intention to publish the work of this\nproject in a timely fashion and we welcome collaborative\ninteraction on the project and analysis.\n(http://www.genome.gov/page.cfm?pageID=10506376).\nThe annotation was added by the NCBI Prokaryotic Genome Annotation\nPipeline (PGAP). Information about PGAP can be found here:\nhttps://www.ncbi.nlm.nih.gov/genome/annotation_prok/\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI RefSeq\nAnnotation Date :: 04/03/2023 01:18:23\nAnnotation Pipeline :: NCBI Prokaryotic Genome\n Annotation Pipeline (PGAP)\nAnnotation Method :: Best-placed reference protein\n set; GeneMarkS-2+\nAnnotation Software revision :: 6.5\nFeatures Annotated :: Gene; CDS; rRNA; tRNA; ncRNA\nGenes (total) :: 4,547\nCDSs (total) :: 4,492\nGenes (coding) :: 4,404\nCDSs (with protein) :: 4,404\nGenes (RNA) :: 55\nrRNAs :: 2, 2, 2 (5S, 16S, 23S)\ncomplete rRNAs :: 2, 2, 2 (5S, 16S, 23S)\ntRNAs :: 45\nncRNAs :: 4\nPseudo Genes (total) :: 88\nCDSs (without protein) :: 88\nPseudo Genes (ambiguous residues) :: 0 of 88\nPseudo Genes (frameshifted) :: 24 of 88\nPseudo Genes (incomplete) :: 49 of 88\nPseudo Genes (internal stop) :: 30 …

sequence
subclass of: SO_0000155
sequence length: 16601
topology: circular
so has quality: SO_0000988
location: 1..16601
location: region:1-16601:1
RO_0002162: 41431

NC_011727
type: RefSeq
SIO_000068: refseq

PRJNA224116
type: BioProject
SIO_000068: bioproject

SAMN00000280
type: BioSample
SIO_000068: biosample

1
title: Complete sequence of plasmid3 of Cyanothece sp. PCC 8801
author: Lucas, S.
author: Copeland, A.
author: Lapidus, A.
author: Glavina del Rio, T.
author: Dalin, E.
author: Tice, H.
author: Bruce, D.
author: Goodwin, L.
author: Pitluck, S.
author: Chertkov, O.
author: Brettin, T.
author: Detter, J.C.
author: Han, C.
author: Larimer, F.
author: Land, M.
author: Hauser, L.
author: Kyrpides, N.
author: Mikhailova, N.
author: Liberton, M.
author: Stoeckel, J.
author: Banerjee, A.
author: Singh, A.
author: Page, L.
author: Sato, H.
author: Zhao, L.
author: Sherman, L.
author: Pakrasi, H.
author: Richardson, P.
journal: Unpublished

2
title: Direct Submission
author: Lucas, S.
author: Copeland, A.
author: Lapidus, A.
author: Glavina del Rio, T.
author: Dalin, E.
author: Tice, H.
author: Bruce, D.
author: Goodwin, L.
author: Pitluck, S.
author: Chertkov, O.
author: Brettin, T.
author: Detter, J.C.
author: Han, C.
author: Larimer, F.
author: Land, M.
author: Hauser, L.
author: Kyrpides, N.
author: Mikhailova, N.
author: Liberton, M.
author: Stoeckel, J.
author: Banerjee, A.
author: Singh, A.
author: Page, L.
author: Sato, H.
author: Zhao, L.
author: Sherman, L.
author: Pakrasi, H.
author: Richardson, P.
journal: Submitted (11-DEC-2008) US DOE Joint Genome Institute, 2800 Mitchell Drive B100, Walnut Creek, CA 94598-1698, USA

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:16601:1
position: 16601
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-16601:1:source
so part of: sequence
organism: Rippkaea orientalis PCC 8801
mol type: genomic DNA
strain: PCC 8801
type material: reference strain of Rippkaea orientalis
plasmid: pP880103

41431
type: Taxonomy
SIO_000068: taxonomy

PCC8801_RS22220
type: Gene
subclass of: SO_0000704
RO_0002162: 41431
locus tag: PCC8801_RS22220
old locus tag: PCC8801_4556
so part of: sequence
location: 48..284
location: region:48-284:1
so has part: feature:48-284:1:exon
subclass of: SO_0000010

position:48:1
position: 48
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:284:1
position: 284
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:48-284:1:exon

PCC8801_RS22220
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 41431
locus tag: PCC8801_RS22220
old locus tag: PCC8801_4556
inference: COORDINATES: similar to AA sequence:RefSeq:WP_009547311.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: type II toxin-antitoxin system HicB family antitoxin
translation: MTVHKTNNERIVFLYPDEDGYIIAEVPSLPGCISQGETRQEALQNIQEAIALHLEVLQERGELIPEDNIEITSVPVLI
SIO_010081: PCC8801_RS22220
subclass of: SO_0000673
so part of: PCC8801_RS22220
location: 48..284
location: region:48-284:1
so has part: feature:48-284:1:exon

WP_012597288.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:48-284:1:exon

PCC8801_RS22225
type: Gene
subclass of: SO_0000704
RO_0002162: 41431
locus tag: PCC8801_RS22225
old locus tag: PCC8801_4557
so part of: sequence
location: 285..710
location: region:285-710:1
so has part: feature:285-710:1:exon
subclass of: SO_0000010

position:285:1
position: 285
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:710:1
position: 710
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:285-710:1:exon

PCC8801_RS22225
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 41431
locus tag: PCC8801_RS22225
old locus tag: PCC8801_4557
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MSFKELMGKAKRRKKLTPTHGKGFGSKNQQSLNLFLMGDIGLKCYEIYGRGILFNIPHSAPKYVLSSCSWLKLQEIELINTYNPSEEVILAEFIEPLKSSGRMVKSFSFELANQMRVFSTHQTIEELVSKMFVATADNEPS
SIO_010081: PCC8801_RS22225
subclass of: SO_0000673
so part of: PCC8801_RS22225
location: 285..710
location: region:285-710:1
so has part: feature:285-710:1:exon

WP_203427751.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:285-710:1:exon

PCC8801_RS22230
type: Gene
subclass of: SO_0000704
RO_0002162: 41431
locus tag: PCC8801_RS22230
old locus tag: PCC8801_4558
so part of: sequence
location: complement(737..4258)
location: region:737-4258:-1
so has part: feature:737-4258:-1:exon
subclass of: SO_0000010

position:737:-1
position: 737
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4258:-1
position: 4258
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:737-4258:-1:exon

PCC8801_RS22230
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 41431
locus tag: PCC8801_RS22230
old locus tag: PCC8801_4558
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012797089.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF3854 domain-containing protein
translation: MTNPTSIRTEFITESKIAPNLFEKAVTFLPDLEINHVTHEVEGTPLYDALGWPYTRFGHQAKPNLLGAAFIQETGEPWQCKIYGELNKPRQDKETRGQGGQGDKEDKKDFCGEQSPVSPVSPVSPPSEKRTGQYYAPKGIGDVPYLPPVPREFIEKLALEYDLPLPPENTSFWQWFQENKVIPLLLTEGGKKSLSALSSDIVAIALYGCLCGVDSETGAVKESLRPYIEGRRVYIAFDQDKKPKTRQTVAKATQKLALAITKASGEPYQVLWNTEDGKGVDDVIKNQGGDYFKHRIKLAQLIDPIQQQLNTLTRDIDLTVNQANLEGILKHLPRTGKLHISSPKCTRKSSAIIEPLVKEWKQKKQLVISIVPRILLGKEQAVRWDINWIDEYGKAHFESYDTIGLCFDSLGKLSSKNWSGALILFDEIRQGFKHFISSPTLEERRSFLLKLLQEKLPQAVNGGGLIVGCDSDLTDVEINYIDEICPVGKTFIVKNEYQPKKGLVIFNTGKYDETLDEILHRYENGENLFIFCDTKANSQAIHDRLKQLDPHATHWLLNGDTTSEAENKAIIENNINDSLKQQKPRSLVFTTSMSTGISIDGWINHQFHAEVFDHFTYGFVIAQGGILEPVEITQSMARVRKNLDFTVYSGTGKKPDDLLNSCHPDVIKRQIYKRNHRAFDLQLITAEILEEKLGREPTHYEILAEMMSKCDPETGMVIDPHLDLYCRAKARLNYASQNFDLMLYQQLIDEGYQLARYDCLETTSTGNQIREIKEAHKWEEAEATADSLDICIEEAIEISYSNAPVEQRRQAAKAFLKQELPGVELTPDFIYKAVIKDKRRWLRGHKLFWYCQHPDITREIDLGHYLNKIKQFANGVIFLPDLRNVSVMVDEINELGLWELIDLENPRELSKDDPRVLSFMERAYFRRYKLYNALGLTVTEKTDSIKFIERLLQRLGLGLVLTRTEKQGEKKIRYYSLNTEALNDPDRVAVLEALTRRFLGAVPTNYQLAEKLPPSVIESGTGLSQEYIQKRSPVPPDLVHKESLGTGHAKECIQKRSSVPPDLVHKESLGTRDAKECIQKRSPVPCAKGQTKGSLSQRPGAQTFKLPMNRGFAHWCSFKYGEVIYDSRQIVPSPLWVIGSSESEGCGLIVASEDGIEILPYRYGVRWPSQQVS
SIO_010081: PCC8801_RS22230
subclass of: SO_0000673
so part of: PCC8801_RS22230
location: complement(737..4258)
location: region:737-4258:-1
so has part: feature:737-4258:-1:exon

WP_012597290.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:737-4258:-1:exon

PCC8801_RS22235
type: Gene
subclass of: SO_0000704
RO_0002162: 41431
locus tag: PCC8801_RS22235
old locus tag: PCC8801_4559
so part of: sequence
location: complement(4567..4851)
location: region:4567-4851:-1
so has part: feature:4567-4851:-1:exon
subclass of: SO_0000010

position:4567:-1
position: 4567
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4851:-1
position: 4851
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4567-4851:-1:exon

PCC8801_RS22235
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 41431
locus tag: PCC8801_RS22235
old locus tag: PCC8801_4559
inference: COORDINATES: similar to AA sequence:RefSeq:WP_008278853.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MPKSLTTSEPNILRPEDFDPPLKRKEPSLPGYWTLKEIATELNISFRRVGYDITGYPQKNIEPSLKAFKVGPIFLVSDENALEYIKRYRERKKS
SIO_010081: PCC8801_RS22235
subclass of: SO_0000673
so part of: PCC8801_RS22235
location: complement(4567..4851)
location: region:4567-4851:-1
so has part: feature:4567-4851:-1:exon

WP_012597291.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4567-4851:-1:exon

PCC8801_RS22240
type: Gene
subclass of: SO_0000704
RO_0002162: 41431
locus tag: PCC8801_RS22240
old locus tag: PCC8801_4560
so part of: sequence
location: 5342..9799
location: region:5342-9799:1
so has part: feature:5342-9799:1:exon
subclass of: SO_0000010

position:5342:1
position: 5342
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9799:1
position: 9799
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5342-9799:1:exon

PCC8801_RS22240
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 41431
locus tag: PCC8801_RS22240
old locus tag: PCC8801_4560
inference: COORDINATES: protein motif:HMM:TIGR03696.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: RHS repeat-associated core domain-containing protein
translation: MTTTLEVLDFNDVDAPIINFPRLANNTITSPIEIIGTVTDYDEDNHDTLQYYTLEVAKLGTDDFQEVFKGTKSVNNGVLGIFDPSLLENDAYTLRLKAVDRGGNLVFEERTINVEGDLKLGNFQLSFTDLSIPVAGIPISITRTYDTLTAQERDDFGYGWRLEFRDTNLRTSLGKDDYYETFDIIGQGFKEGDKVYLTLPGGKREAFTFKPELDRLGAFLQGAAAGLGLGEDPGLYHPKFVSESDSNNVLTVKDVLIIRTANGDFAGLAGNLYNPVDPYFGGQYTLTTGEGIVYEIEAETGDLLTVTDTNNNRLTFSENGIKSETGVEVKFNRDAKGRITSIVDPMGNVIKYDYDGHGDLIKVIDREENETKFDYSEERKHYLERIIDPLNREAVRTEYDETGRLKKVIDVNGEAVELVYDVDNSTQTTKGEEGYTTTYTYDEKGNKLTETDALGNTTYYTYGKLNRLLSETDAKGNTTTYDYGVRTGNLLSTKDALGNITKFSYDSRGNLVSLTDAANNITKFEYDLQGNVTKIIDANGHETHYTYDSNGNQLTESKTVTTAQGLVTVLTQNTYDKQGNLLSVTDAENNPTYYEYNELNQQTAVTDTLLRKTEYRYDNKGQLVETIYPDSTPNNNADNPRTITVYDRGSRQKATIDQAGRVTYYNYDQLGRLIETIYPDEVDTLSQFVSFLDSSKTVTTIDWTEVIYPDSNPSYLSDNPRTQTEYYQDGQVKANINERGYRTEYIYDANDQLIEIIYPELEYNPGINFTTTSTYDVVGRKIAETDGLGRTTNYVYDELGRLTKTLFADGTFTTSTYDKLGRRITTTDQEGKVTNYEYDSLGRLTDVVQYLNQNSLNPTEIRTEYGYDELGRLIWVEDANDHKTNYEYDKLGRRTDIELPLGQRSTTSYDEVGNIETVTDFNEKIITYFYDEQNRLIKKLFADNSSVDYTYTLTGLRETITDSRGTTTYTYDERDRLIAQTDPTGVYLNSGNTLEYSYDLTGNRTSVTTPSGTVYYTFDEWNRLKTVTDADNHQTIYVYDGVSNLIETTFSNGVIETRDYDDLNRLIKLENKLGNQVISGYEYTLDKVGNRLKVKEADGRIVEYEYDDLYRLIEEKITDSLDTVNDGRVISYTYDAVGNRLTKVDSVEGTTTYDYNANDWLLTETEENGDVKEYEYDETTFYQVDGLGSTRILTNEKGELINTYDYDAFGNLIESTGDIENNYLFAGEQFDENLGEYYLRQRYYNQEVGRFTRRDTYEGSLNNPVSLHKYLYANANPVIYIDPTGLYTLTEFSAGQAIADALAISLGISGFISNSYNPERLGGFGENEKPSTVLDRLLIWRNTWAPESIGGFGENLQPTFPNHTGHSNRDINDLIRYIFAISDPFELSNDIAYGHAWNAARNLEWAKLGINSQQQLADLIYDIVIFYEQKKVDGDKIIYLGSDGTIVIDNPRDPDGGTAFNPNIQQGNSQASQIYFDEQPGRVVD
SIO_010081: PCC8801_RS22240
subclass of: SO_0000673
so part of: PCC8801_RS22240
location: 5342..9799
location: region:5342-9799:1
so has part: feature:5342-9799:1:exon

WP_012597292.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:5342-9799:1:exon

PCC8801_RS22245
type: Gene
subclass of: SO_0000704
RO_0002162: 41431
locus tag: PCC8801_RS22245
old locus tag: PCC8801_4561
so part of: sequence
location: 9834..10727
location: region:9834-10727:1
so has part: feature:9834-10727:1:exon
subclass of: SO_0000010

position:9834:1
position: 9834
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:10727:1
position: 10727
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9834-10727:1:exon

PCC8801_RS22245
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 41431
locus tag: PCC8801_RS22245
old locus tag: PCC8801_4561
inference: COORDINATES: similar to AA sequence:RefSeq:WP_008274608.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MKIITITYQKAKIQLSFQELTVFGNILNEVYKALHELEFETRVGVTFRQARSFLSSFTQESEQTGEQLIAISLSLSEISLLNNLLNEVCYGIKLQNFETKVGMTEEEVKQFLNLVNQAMKEMDLIREERKKTKIPSPSDSREIDNICSLEAEGYQVTFYFKKMAGNLNNIGVFIVLRFTSFNSVELMISSLPKSMSMENLEEFINNLEKYLEFSKEPTSDLVIPFQIFQNNIFQVQALERGITLDNEEYVNLNFMISLAQARGNIIKPSIGVQAAVLLKNIRSFISSMQKIIIDLKN
SIO_010081: PCC8801_RS22245
subclass of: SO_0000673
so part of: PCC8801_RS22245
location: 9834..10727
location: region:9834-10727:1
so has part: feature:9834-10727:1:exon

WP_012597293.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:9834-10727:1:exon

PCC8801_RS22250
type: Gene
subclass of: SO_0000704
RO_0002162: 41431
locus tag: PCC8801_RS22250
old locus tag: PCC8801_4563
so part of: sequence
location: 11271..12215
location: region:11271-12215:1
so has part: feature:11271-12215:1:exon
subclass of: SO_0000010

position:11271:1
position: 11271
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:12215:1
position: 12215
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11271-12215:1:exon

PCC8801_RS22250
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 41431
locus tag: PCC8801_RS22250
old locus tag: PCC8801_4563
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015186136.1
GO function: GO:0003677 - DNA binding [Evidence IEA]
GO process: GO:0015074 - DNA integration [Evidence IEA]; GO:0006310 - DNA recombination [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: tyrosine-type recombinase/integrase
translation: MSGSPAKKAPRHQSLTSPTDLQNVRVEEFLATKALSPNSQKAYRRELLTFLAIVNKPFARIQSRHIVQYKVQLTEKLAPSSVNRALSALSSFFDWLEEAYGNPNPTLTIRQNKLPLPPARDLSDAELEALFEALENRPNLTKVRDKAVFAALRHGLRAGEVASLNLGDYDGIRLHIRVAKDDSSGHVPLDAPGRDAINTYLQQRRETGESFNPTSPLFLSHSPVPNTPPRFGYQGIYYFIKELGEMAGVANLTPHRLRHTFATQLLLTGMEPLHARTLTRHKSEVSFKRYAKRALEAAAERAFYRAIGEEPPTL
SIO_010081: PCC8801_RS22250
subclass of: SO_0000673
so part of: PCC8801_RS22250
location: 11271..12215
location: region:11271-12215:1
so has part: feature:11271-12215:1:exon

WP_012597294.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:11271-12215:1:exon

PCC8801_RS22255
type: Gene
subclass of: SO_0000704
RO_0002162: 41431
locus tag: PCC8801_RS22255
old locus tag: PCC8801_4564
so part of: sequence
location: 12341..12925
location: region:12341-12925:1
so has part: feature:12341-12925:1:exon
subclass of: SO_0000010

position:12341:1
position: 12341
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:12925:1
position: 12925
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:12341-12925:1:exon

PCC8801_RS22255
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 41431
locus tag: PCC8801_RS22255
old locus tag: PCC8801_4564
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012597295.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MNVKELCDRYSLQSRKSLYSRLEAVGLKLPKDDDGRAYATEQILEQLDDLDLHLKNGGSLKNYTPVTSVTTQLETTENAYFLENTTQTTQLTTQTTTQLSREELLEIIEVLGSAIASRLQPIDPIAYNHSLEQAQQNNWILSSSEVKQLIGIKPSCPKGENVFTRGCWAFTKAGKIGNQTGWRVKKILEGDGHK
SIO_010081: PCC8801_RS22255
subclass of: SO_0000673
so part of: PCC8801_RS22255
location: 12341..12925
location: region:12341-12925:1
so has part: feature:12341-12925:1:exon

WP_012597295.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:12341-12925:1:exon

PCC8801_RS22260
type: Gene
subclass of: SO_0000704
RO_0002162: 41431
locus tag: PCC8801_RS22260
old locus tag: PCC8801_4565
so part of: sequence
location: complement(13092..13262)
location: region:13092-13262:-1
so has part: feature:13092-13262:-1:exon
subclass of: SO_0000010

position:13092:-1
position: 13092
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:13262:-1
position: 13262
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:13092-13262:-1:exon

PCC8801_RS22260
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 41431
locus tag: PCC8801_RS22260
old locus tag: PCC8801_4565
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MNAPTVRGRLSSNAQLVKEQMTPDLEQGESDDDFLVSEQEKRRVSGEDLMSSMGLF
SIO_010081: PCC8801_RS22260
subclass of: SO_0000673
so part of: PCC8801_RS22260
location: complement(13092..13262)
location: region:13092-13262:-1
so has part: feature:13092-13262:-1:exon

WP_203427750.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:13092-13262:-1:exon

PCC8801_RS22265
type: Gene
subclass of: SO_0000704
RO_0002162: 41431
gene: mobC
locus tag: PCC8801_RS22265
old locus tag: PCC8801_4566
so part of: sequence
location: 13267..13785
location: region:13267-13785:1
so has part: feature:13267-13785:1:exon
subclass of: SO_0000010

position:13267:1
position: 13267
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:13785:1
position: 13785
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:13267-13785:1:exon

PCC8801_RS22265
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 41431
gene: mobC
locus tag: PCC8801_RS22265
old locus tag: PCC8801_4566
inference: COORDINATES: similar to AA sequence:RefSeq:WP_008278863.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: plasmid mobilization relaxosome protein MobC
translation: MTSSTIFPAYSLFRHFGYTSQNAETESLSLGIPPRTPIGQMGKESSLFFKNMTTAKRDANLTIRLSQTEKLAWQEKADLVGMTLSDLIRQAISRTKTWTVADKSLMKEQTRQIARIGNNLNQIARWANTYKSTAEAIEIIQALRLIEQSLNQLSIKANQSSSPSPNSKDIDD
SIO_010081: PCC8801_RS22265
subclass of: SO_0000673
so part of: PCC8801_RS22265
location: 13267..13785
location: region:13267-13785:1
so has part: feature:13267-13785:1:exon

WP_241392732.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:13267-13785:1:exon

PCC8801_RS22270
type: Gene
subclass of: SO_0000704
RO_0002162: 41431
locus tag: PCC8801_RS22270
old locus tag: PCC8801_4567
so part of: sequence
location: 13803..16559
location: region:13803-16559:1
so has part: feature:13803-16559:1:exon
subclass of: SO_0000010

position:13803:1
position: 13803
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:16559:1
position: 16559
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:13803-16559:1:exon

PCC8801_RS22270
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 41431
locus tag: PCC8801_RS22270
old locus tag: PCC8801_4567
inference: COORDINATES: similar to AA sequence:RefSeq:WP_009547983.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: toprim domain-containing protein
translation: MLLKFFNRGTGKGKGPVEYILNATDTKGIPREPQPELLKGNPQQIITLIDSLDFKHKYTSGVISFAPTDAPTNEQLEAIITSFEDTAFAGLEPDQYDILWVKHTHTGGGATALAERGRVELHFVTPRVELTTGKSLNIAPPGANYYFEPWRDYWNMTHGWASPNDPQRARTYYPGYHALIDAQNCRLELNGQKPVSRDDARKLITNYLTAYIEEGQIQNRNDIVTTLEEAGFTITRQGDNYITVTHDDLHQRIRLKGGIYSASWRLGAEFTAETRTEPKTGGSDCGAEFTTISDKLAAYLQKRRDFHRQKYGAHYPSSPDLVEMDGLFPGGDFACDLSGYLGRQLGDESIFNESVQTDSNEPTNPQPTQAEDLGGGTLSKQGGQVHHSTPQQPLPNRLEMQREALSQAVDNDPLNRLETLFKTVDNDLLEREQTLSKTVDNLPLARLESLSNPLDNLSLPRQETLSNPLDNTPLSRQEILSNSLDNDRWGKQEQALLNAVNEDDESTRKRITRNLQELCRELRGGQERTTEINHQFPRTTEQKIGVFNHSTERINQELLRNNQLLQQHTDRLIRENQQARERLSRHHERLRRIKEQQFRELDKFKTDINLADYAQTLGYEVNKKKSSVNCLVLKDNQGDKILVGINQADGHYFYSSVNDDRDKGSIIDFIQKRRNLNLGEVRKELRPWLNNPYSPKEATPKLTPITQDRQKILTEFEGFQVIVTHPYLTQRGITPETSNLPRFQGIIYMDSRNNLIFPHQDREGVCGYEIRHQAFKGFSSGGTKGLWCSQGASTDTKLVICESPLDCLSYHQLFPDETTRYMATGGTLSEKQKDLLQGALTKINDLGGEIIVATDKDEAGQKMAQELRNLAPSTAQMSRVVPTHHKDWNEALMAEIRRQREQEQEQQQKRSRGRGLSR
SIO_010081: PCC8801_RS22270
subclass of: SO_0000673
so part of: PCC8801_RS22270
location: 13803..16559
location: region:13803-16559:1
so has part: feature:13803-16559:1:exon

WP_012597298.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:13803-16559:1:exon