Clostridium botulinum A str. ATCC 3502 plasmid pBOT3502, complete sequence.
type: Entry
definition: Clostridium botulinum A str. ATCC 3502 plasmid pBOT3502, complete sequence.
sequence version: NC_009496.1
sequence date: 2023-04-12
sequence: sequence
division: CON
label: NC_009496.1
type: RefSeq
SIO_000068: refseq
dblink: PRJNA224116
dblink: SAMEA1705919
keyword: RefSeq
keyword: complete genome
source: Clostridium botulinum A str. ATCC 3502
organism: Clostridium botulinum A str. ATCC 3502
taxonomy: Bacteria; Bacillota; Clostridia; Eubacteriales; Clostridiaceae; Clostridium.
reference: 1
references: 17519437
reference: 2
comment: REFSEQ INFORMATION: The reference sequence is identical to\nAM412318.1.\nThe annotation was added by the NCBI Prokaryotic Genome Annotation\nPipeline (PGAP). Information about PGAP can be found here:\nhttps://www.ncbi.nlm.nih.gov/genome/annotation_prok/\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI RefSeq\nAnnotation Date :: 04/12/2023 01:04:31\nAnnotation Pipeline :: NCBI Prokaryotic Genome\n Annotation Pipeline (PGAP)\nAnnotation Method :: Best-placed reference protein\n set; GeneMarkS-2+\nAnnotation Software revision :: 6.5\nFeatures Annotated :: Gene; CDS; rRNA; tRNA; ncRNA\nGenes (total) :: 3,697\nCDSs (total) :: 3,586\nGenes (coding) :: 3,545\nCDSs (with protein) :: 3,545\nGenes (RNA) :: 111\nrRNAs :: 9, 9, 9 (5S, 16S, 23S)\ncomplete rRNAs :: 9, 9, 9 (5S, 16S, 23S)\ntRNAs :: 80\nncRNAs :: 4\nPseudo Genes (total) :: 41\nCDSs (without protein) :: 41\nPseudo Genes (ambiguous residues) :: 0 of 41\nPseudo Genes (frameshifted) :: 15 of 41\nPseudo Genes (incomplete) :: 31 of 41\nPseudo Genes (internal stop) :: 3 of 41\nPseudo Genes (multiple problems) :: 7 of 41\nCRISPR Arrays :: 2\n##Genome-Annotation-Data-END##\nCOMPLETENESS: full length.

sequence
subclass of: SO_0000155
sequence length: 16344
topology: circular
so has quality: SO_0000988
location: 1..16344
location: region:1-16344:1
RO_0002162: 413999

NC_009496
type: RefSeq
SIO_000068: refseq

PRJNA224116
type: BioProject
SIO_000068: bioproject

SAMEA1705919
type: BioSample
SIO_000068: biosample

1
title: Genome sequence of a proteolytic (Group I) Clostridium botulinum strain Hall A and comparative analysis of the clostridial genomes
author: Sebaihia, M.
author: Peck, M.W.
author: Minton, N.P.
author: Thomson, N.R.
author: Holden, M.T.
author: Mitchell, W.J.
author: Carter, A.T.
author: Bentley, S.D.
author: Mason, D.R.
author: Crossman, L.
author: Paul, C.J.
author: Ivens, A.
author: Wells-Bennik, M.H.
author: Davis, I.J.
author: Cerdeno-Tarraga, A.M.
author: Churcher, C.
author: Quail, M.A.
author: Chillingworth, T.
author: Feltwell, T.
author: Fraser, A.
author: Goodhead, I.
author: Hance, Z.
author: Jagels, K.
author: Larke, N.
author: Maddison, M.
author: Moule, S.
author: Mungall, K.
author: Norbertczak, H.
author: Rabbinowitsch, E.
author: Sanders, M.
author: Simmonds, M.
author: White, B.
author: Whithead, S.
author: Parkhill, J.
journal: Genome Res
volume: 17
issue: 7
pages: 1082-1092
year: 2007
pubmed: 17519437

17519437
type: PubMed
SIO_000068: pubmed

2
title: Direct Submission
author: Sebaihia, M.
journal: Submitted (21-NOV-2006) Sebaihia M., Sulston Laboratories, Wellcome Trust Sanger Institute, Wellcome Trust Genome Campus, Hinxton, Cambridge, CB10 1SA, UNITED KINGDOM

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:16344:1
position: 16344
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-16344:1:source
so part of: sequence
organism: Clostridium botulinum A str. ATCC 3502
mol type: genomic DNA
strain: ATCC 3502
plasmid: pBOT3502

413999
type: Taxonomy
SIO_000068: taxonomy

CBO_RS18190
type: Gene
subclass of: SO_0000704
RO_0002162: 413999
locus tag: CBO_RS18190
old locus tag: CBOP01
so part of: sequence
location: complement(1..3585)
location: region:1-3585:-1
so has part: feature:1-3585:-1:exon
subclass of: SO_0000010

5188018
type: Gene
SIO_000068: ncbigene

position:1:-1
position: 1
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3585:-1
position: 3585
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1-3585:-1:exon

CBO_RS18190
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 413999
locus tag: CBO_RS18190
old locus tag: CBOP01
EC number: 2.7.7.7
inference: COORDINATES: similar to AA sequence:RefSeq:WP_003479010.1
GO function: GO:0008408 - 3'-5' exonuclease activity [Evidence IEA]
GO process: GO:0006260 - DNA replication [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DNA polymerase III subunit alpha
translation: MSDKKFTHLHLHTGYSLLDGAGKINNIIASAKELGMDSIAITDHGAMYGCVDFYKAAKNAGLKAIIGCEVYIVPKSMSIKNSDPNNKIYHLVLLVKNEIGYKNLIKIVSKASIDGFYYKPRTDHQFLKDHSEGLIALSACLGGEIQSNLLNENKEKAKEIALFYKSIFKDGFYLELQYHGNDAERKVNDMNIRLARELKIPLVATNDVHYIEQKDSKFHDILLCIQTGKTVNKENRLRYPSDQFYLKSADEMWEMFSHVPEALKNTEKIAEQCNFHYDFHTSKLPKFLLPEGTDPFEYMKKFCFKGLIKRCDLFRDLLTKSFNINEIIALGKENEEAKIYIDRLQYELSVIDHMGYVDYFLIVSDFIKFANEKKIPTGPGRGSGAGSLVAYTLGITKIDPIKYGLIFERFLNPERISMPDIDSDFCYERRGEIIDYVVEKYGKENVSQIITFGTMAARVCIRDVGRAMNYSYVEVDKIAKMIPIVPGIIITIDKALALNPELKNEYENNLRVKELIDVSMNLEGLPRHSSTHAAGIIISSSPIGDYVPLQKNEHNIVSQFDMTTLDELGFLKMDFLGLKTLTVLKDAVDMIMQNHNVDIDLDKIDINDKEVYKMIGEGKTIGIFQLESTGMTSFMKELKPDSLEDIIAGISLYRPGPIDEIPKYIENKKNPDKITYLTPQLEPILKITYGCLVYQEQVMEIVRKLAGYSMGRSDLVRRAMSKKKHKVMEEERKNFIYGIVKEDGEIEVPGCIRNEVSEKIGNELFDSMMDFASYAFNKSHAVAYALVAYQTAYLMKYYPAEYIAAKLNSVMGDNGKVAYYINYAESLGIQVLPPDINESFSKFIVEDNTIRFGLDAIKNVGIGAAKIIVKSRKKNGNFKSLIDFASKIDLTTINKRAIESLIKAGAFDCFKVFRSRLLAVYEKVLDSISNQRKRNIDGQVSLFNADNTIVNIPIIKYPEIKEFDKKYLLAMEKEMLGIYITGHPLDEYAQSLKIQTSIRIEKILCSHNKVLNDDSIIEISSDNNIIRGDINDGERVVIGGIITKVSRKITRNNTIMAFLKLEDLSGIIEVIVFPKTLENVNPLINEDSLVVIRGRVSLAEDELPKLICEKIHPLEKLNLSKVYIRVKDNKKVRTANKFLKTILKSHKGDTPIYIFSEKEKQNFRLSKNLLISLDEDILSTLRSYFGDENIKVVD
SIO_010081: CBO_RS18190
subclass of: SO_0000673
so part of: CBO_RS18190
location: complement(1..3585)
location: region:1-3585:-1
so has part: feature:1-3585:-1:exon

WP_011949166.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1-3585:-1:exon

CBO_RS18195
type: Gene
subclass of: SO_0000704
RO_0002162: 413999
locus tag: CBO_RS18195
old locus tag: CBOP02
so part of: sequence
location: complement(3754..3924)
location: region:3754-3924:-1
so has part: feature:3754-3924:-1:exon
subclass of: SO_0000010

5188036
type: Gene
SIO_000068: ncbigene

position:3754:-1
position: 3754
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3924:-1
position: 3924
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3754-3924:-1:exon

CBO_RS18195
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 413999
locus tag: CBO_RS18195
old locus tag: CBOP02
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MQLENYFFEADELGNINVYNADTMQFLDLIHVSYRYDRYKFLDNCKEWICKKNEGI
SIO_010081: CBO_RS18195
subclass of: SO_0000673
so part of: CBO_RS18195
location: complement(3754..3924)
location: region:3754-3924:-1
so has part: feature:3754-3924:-1:exon

WP_164928190.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3754-3924:-1:exon

CBO_RS18205
type: Gene
subclass of: SO_0000704
RO_0002162: 413999
locus tag: CBO_RS18205
old locus tag: CBOP04
so part of: sequence
location: 4365..4556
location: region:4365-4556:1
so has part: feature:4365-4556:1:exon
subclass of: SO_0000010

5188021
type: Gene
SIO_000068: ncbigene

position:4365:1
position: 4365
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4556:1
position: 4556
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4365-4556:1:exon

CBO_RS18205
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 413999
locus tag: CBO_RS18205
old locus tag: CBOP04
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MNKGFVKLSIDNHVEFVNRELGKDKKYGINKSTIISIFTTKGYKYNAELRCYIKDIKKLKECN
SIO_010081: CBO_RS18205
subclass of: SO_0000673
so part of: CBO_RS18205
location: 4365..4556
location: region:4365-4556:1
so has part: feature:4365-4556:1:exon

WP_193352256.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4365-4556:1:exon

CBO_RS18210
type: Gene
subclass of: SO_0000704
RO_0002162: 413999
locus tag: CBO_RS18210
old locus tag: CBOP005
so part of: sequence
location: 4798..5343
location: region:4798-5343:1
so has part: feature:4798-5343:1:exon
subclass of: SO_0000010

5188022
type: Gene
SIO_000068: ncbigene

position:4798:1
position: 4798
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5343:1
position: 5343
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4798-5343:1:exon

CBO_RS18210
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 413999
locus tag: CBO_RS18210
old locus tag: CBOP005
inference: COORDINATES: similar to AA sequence:RefSeq:WP_000673905.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: site-specific integrase
translation: MELVQPIRDKEVINKFKNELLKKGYRNYMLFVIGINTGLRISDILKLKVEDVKDKTHIVIREQKTSKRTRVLINSMLREDIEKYIEGMDNTEYLFKSRNGKNKPITRVQAYRILSEVGKHLGMSEVGTHTLRKTFGYWHYKQYKDVAILQDIFNHSAPSITLKYIGINDDIKDNTIENFYL
SIO_010081: CBO_RS18210
subclass of: SO_0000673
so part of: CBO_RS18210
location: 4798..5343
location: region:4798-5343:1
so has part: feature:4798-5343:1:exon

WP_011949169.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4798-5343:1:exon

CBO_RS18215
type: Gene
subclass of: SO_0000704
RO_0002162: 413999
locus tag: CBO_RS18215
old locus tag: CBOP06
so part of: sequence
location: 5512..6117
location: region:5512-6117:1
so has part: feature:5512-6117:1:exon
subclass of: SO_0000010

5188019
type: Gene
SIO_000068: ncbigene

position:5512:1
position: 5512
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6117:1
position: 6117
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5512-6117:1:exon

CBO_RS18215
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 413999
locus tag: CBO_RS18215
old locus tag: CBOP06
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: DNA-binding protein
translation: MDRTDFDKLEVQDQVIYINKQLGEGSTLRDIASNLNIARSTLRDRFKKIGYIYNKKLNTYSKTNNEYNKNNTNVLYKEPVKKQNTLEIESYKSNTIVSNKELQSIKEVNNLKKEVFELINNKDIILEMIKDYKSNTKIIDIPQLDINNLPVEMQKDITTKSIKVYKPIYNLFNKLCEEYSSIKKQDLISLALYEFYIRYKK
SIO_010081: CBO_RS18215
subclass of: SO_0000673
so part of: CBO_RS18215
location: 5512..6117
location: region:5512-6117:1
so has part: feature:5512-6117:1:exon

WP_164928191.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:5512-6117:1:exon

CBO_RS18220
type: Gene
subclass of: SO_0000704
RO_0002162: 413999
locus tag: CBO_RS18220
old locus tag: CBOP08
so part of: sequence
location: 6619..6810
location: region:6619-6810:1
so has part: feature:6619-6810:1:exon
subclass of: SO_0000010

5188024
type: Gene
SIO_000068: ncbigene

position:6619:1
position: 6619
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6810:1
position: 6810
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6619-6810:1:exon

CBO_RS18220
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 413999
locus tag: CBO_RS18220
old locus tag: CBOP08
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MKRVKSCRKCEFYNEDEEFNCTNFKMVILDFNNARKCIYYQERMGRRKRCKTCMYLSTTYKQV
SIO_010081: CBO_RS18220
subclass of: SO_0000673
so part of: CBO_RS18220
location: 6619..6810
location: region:6619-6810:1
so has part: feature:6619-6810:1:exon

WP_011949172.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:6619-6810:1:exon

CBO_RS18225
type: Gene
subclass of: SO_0000704
RO_0002162: 413999
gene: mobC
locus tag: CBO_RS18225
old locus tag: CBOP11
so part of: sequence
location: 7704..8258
location: region:7704-8258:1
so has part: feature:7704-8258:1:exon
subclass of: SO_0000010

5188027
type: Gene
SIO_000068: ncbigene

position:7704:1
position: 7704
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8258:1
position: 8258
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7704-8258:1:exon

CBO_RS18225
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 413999
gene: mobC
locus tag: CBO_RS18225
old locus tag: CBOP11
inference: COORDINATES: protein motif:HMM:NF017524.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: plasmid mobilization relaxosome protein MobC
translation: MNKEKAEEIIESVQGNIKHSDMILTDDERALLEEYILGNITREEYIEKSLEDVQKDNIRYGIKGEKILDSTINLSENCKVNRKRNKQIVIRATRKEFNTIKNKVKKSKLSQNEYLLKCALDKRIVVVDGLKDLNVELKRIGNNLNQLIKSVHEGKANCSKELLEINEEMKEVWQLLRQLTPKAL
SIO_010081: CBO_RS18225
subclass of: SO_0000673
so part of: CBO_RS18225
location: 7704..8258
location: region:7704-8258:1
so has part: feature:7704-8258:1:exon

WP_011949175.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:7704-8258:1:exon

CBO_RS18230
type: Gene
subclass of: SO_0000704
RO_0002162: 413999
locus tag: CBO_RS18230
old locus tag: CBOP12
so part of: sequence
location: 8219..8989
location: region:8219-8989:1
so has part: feature:8219-8989:1:exon
subclass of: SO_0000010

5188028
type: Gene
SIO_000068: ncbigene

position:8219:1
position: 8219
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8989:1
position: 8989
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8219-8989:1:exon

CBO_RS18230
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 413999
locus tag: CBO_RS18230
old locus tag: CBOP12
inference: COORDINATES: protein motif:HMM:NF015397.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: relaxase/mobilization nuclease domain-containing protein
translation: MAVIKAVNSKSSLDGIIKYVTREEKTEERLITGKDCSPSNVLEEMKVTKEIFNKTTGRQYKHFIQSFDPNDNLDYMKANKIGLEWAEKIFKGFEVLISTHKDKGHIHNHFVVNSVSFEDGRKLRYSNKELQNFKNVNDRICEREGLNIVREVSKEITSFNHNKYKVIEKAFKGMGESYLLNTGLEVSNSLKVSKTKEEFIKSMEEKGYKVNWKDTRKYITFTTPEGRKIRNSNLQNTLKNDKFTKEGMENELRYNR
SIO_010081: CBO_RS18230
subclass of: SO_0000673
so part of: CBO_RS18230
location: 8219..8989
location: region:8219-8989:1
so has part: feature:8219-8989:1:exon

WP_011949176.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:8219-8989:1:exon

CBO_RS18235
type: Gene
subclass of: SO_0000704
RO_0002162: 413999
locus tag: CBO_RS18235
so part of: sequence
location: 8967..9131
location: region:8967-9131:1
so has part: feature:8967-9131:1:exon
subclass of: SO_0000010

44146766
type: Gene
SIO_000068: ncbigene

position:8967:1
position: 8967
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9131:1
position: 9131
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8967-9131:1:exon

CBO_RS18235
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 413999
locus tag: CBO_RS18235
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MNFDTIDKKKENVILENQAFQKLQEINLMQKMGLENSLLKESLAQSHEKLQELK
SIO_010081: CBO_RS18235
subclass of: SO_0000673
so part of: CBO_RS18235
location: 8967..9131
location: region:8967-9131:1
so has part: feature:8967-9131:1:exon

WP_156226191.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:8967-9131:1:exon

CBO_RS18240
type: Gene
subclass of: SO_0000704
RO_0002162: 413999
locus tag: CBO_RS18240
old locus tag: CBOP13
so part of: sequence
location: 9150..9509
location: region:9150-9509:1
so has part: feature:9150-9509:1:exon
subclass of: SO_0000010

5188029
type: Gene
SIO_000068: ncbigene

position:9150:1
position: 9150
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9509:1
position: 9509
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9150-9509:1:exon

CBO_RS18240
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 413999
locus tag: CBO_RS18240
old locus tag: CBOP13
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MKIKEIQDQTTEKIKELKTSNELLKESIEEKLEILVDKLNEILKGLSIKLDKVYKVYIERMGTETEKKIQALNELQKEAENRCESYYNRKTIIAYLIYINLAITPILFFIIIYIQFFKK
SIO_010081: CBO_RS18240
subclass of: SO_0000673
so part of: CBO_RS18240
location: 9150..9509
location: region:9150-9509:1
so has part: feature:9150-9509:1:exon

WP_164928192.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:9150-9509:1:exon

CBO_RS18245
type: Gene
subclass of: SO_0000704
RO_0002162: 413999
locus tag: CBO_RS18245
old locus tag: CBOP15
so part of: sequence
location: 10117..11325
location: region:10117-11325:1
so has part: feature:10117-11325:1:exon
subclass of: SO_0000010

5188031
type: Gene
SIO_000068: ncbigene

position:10117:1
position: 10117
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:11325:1
position: 11325
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:10117-11325:1:exon

CBO_RS18245
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 413999
locus tag: CBO_RS18245
old locus tag: CBOP15
inference: COORDINATES: protein motif:HMM:NF015983.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: PqqD family peptide modification chaperone
translation: MRSYVSINESASSILGLCNGMHSIEDIISILSNKYEEDPNVVKKNVQTFLDPFIKNSIVRDNKVEFSNRNIVNGSLEVYYPHALCWEITDYCPLNCRHCYLPEKNNSILSRDNIDNVLEIIDSAGIQQVQVTGGEALTHPELEYIIDSLINRGIITSISTSGFNFTNDMFKYLVKLKEVKGSKLRVSLDGDKNIHNYIRKNEYAYNNAIEFIKTAVKNGIICQVETSVINQSKQDLEDLVVLVKELGVSSIEIARISDQGNARKNNLELVWSPKEFDDFLYQLNSKYANETFKIRLPKEEKNKNCGAGYKIIRIKPNFDVTPCPMLEFRLGNLHKDTMFQIMSKCGNIFHEFEAPQNKFCSECENKDTCDHCIASGFNSKDKVKDCRWFRNIEYCLKPFLDR
SIO_010081: CBO_RS18245
subclass of: SO_0000673
so part of: CBO_RS18245
location: 10117..11325
location: region:10117-11325:1
so has part: feature:10117-11325:1:exon

WP_164928193.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:10117-11325:1:exon

CBO_RS18250
type: Gene
subclass of: SO_0000704
RO_0002162: 413999
locus tag: CBO_RS18250
old locus tag: CBOP16
so part of: sequence
location: 11531..11692
location: region:11531-11692:1
so has part: feature:11531-11692:1:exon
subclass of: SO_0000010

5188032
type: Gene
SIO_000068: ncbigene

position:11531:1
position: 11531
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:11692:1
position: 11692
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11531-11692:1:exon

CBO_RS18250
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 413999
locus tag: CBO_RS18250
old locus tag: CBOP16
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: bacteriocin
translation: MEKPKITNANMVACSGNPYAAIAMLGLACGADFAYCQMPSVSDLWGSGTAKAL
SIO_010081: CBO_RS18250
subclass of: SO_0000673
so part of: CBO_RS18250
location: 11531..11692
location: region:11531-11692:1
so has part: feature:11531-11692:1:exon

WP_011949180.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:11531-11692:1:exon

CBO_RS18255
type: Gene
subclass of: SO_0000704
RO_0002162: 413999
locus tag: CBO_RS18255
old locus tag: CBOP17
so part of: sequence
location: 11905..13080
location: region:11905-13080:1
so has part: feature:11905-13080:1:exon
subclass of: SO_0000010

5188035
type: Gene
SIO_000068: ncbigene

position:11905:1
position: 11905
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:13080:1
position: 13080
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11905-13080:1:exon

CBO_RS18255
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 413999
locus tag: CBO_RS18255
old locus tag: CBOP17
inference: COORDINATES: protein motif:HMM:NF039907.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: metallopeptidase TldD-related protein
translation: MNYKQSVYTIQLKYIKDDFEYIVDSFSGEREETIRNIKLNTCKNLFDDVQLNISTPYLINLKKSLRYIKKDLEKQDINLSIFMNLHNERVLIDNEEEDNRSYGFLRLICKDNDNNMHIDDIPILSCNPIDLEDKINYYAKKYISMKNLHDIREQVSFESIPHILSPKAAGYFIHEIVGHTLESDFYSYYKDKYENMKISKKLTVTDSINGYNRLIGLQGYDDVGTKIESLTLINKGKIQNMLAIKKEDSFDHKLYGVARRASYKFEVLPRMRSTYIHPFDDMDQQDILDKYENAIFVNEIFLGGVDHKSGKYNLNGNGFIVKNGELQNFIGDLRISGDILKDISSIDYIGKDFDMFGNYCEKFGQFVRVGSGGPTISISSLNARGVLYGRR
SIO_010081: CBO_RS18255
subclass of: SO_0000673
so part of: CBO_RS18255
location: 11905..13080
location: region:11905-13080:1
so has part: feature:11905-13080:1:exon

WP_011949181.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:11905-13080:1:exon

CBO_RS18260
type: Gene
subclass of: SO_0000704
RO_0002162: 413999
locus tag: CBO_RS18260
old locus tag: CBOP18
so part of: sequence
location: 13067..14290
location: region:13067-14290:1
so has part: feature:13067-14290:1:exon
subclass of: SO_0000010

5188033
type: Gene
SIO_000068: ncbigene

position:13067:1
position: 13067
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:14290:1
position: 14290
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:13067-14290:1:exon

CBO_RS18260
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 413999
locus tag: CBO_RS18260
old locus tag: CBOP18
inference: COORDINATES: protein motif:HMM:NF039907.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: metallopeptidase TldD-related protein
translation: MEEDKRIEKRLLSKGIMEYKIIRTILRGMKYKEYFGSVSIEDLSDDKILVLFKTEEGIAKFTVSSFQSDNIIDRIIETSMKNQMKMSLQWHDDNFSDVKIEQNENYNRFYKFNSNDYIMWIKKEIDNISKKIKFTFNTIYTINVNKYCLRTNKDYIEQYNTSSEFLCIENKTFKRRSKLSNRFLKDDIALSIIKQLNNDDIPRNNINLNSKQRILLKAKGLSDFLNVYISLYYANYIYSNQSFIKTNYIGKQISKSNFDLIAIPYNGIKFDSEGSRIFKKLIVGSGKLINLLSNNSFSEYFNINSFGNASLDTHNTVSHQRLIFTCKNSERIVSKSVDLIIHQFENAYIDFEDNEVFRGNAICSDKSGYFRTTISFNLKYIFNNIYPIGNKSTWINNVYCQDVIILR
SIO_010081: CBO_RS18260
subclass of: SO_0000673
so part of: CBO_RS18260
location: 13067..14290
location: region:13067-14290:1
so has part: feature:13067-14290:1:exon

WP_011949182.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:13067-14290:1:exon

CBO_RS18265
type: Gene
subclass of: SO_0000704
RO_0002162: 413999
locus tag: CBO_RS18265
old locus tag: CBOP19
so part of: sequence
location: 14411..16054
location: region:14411-16054:1
so has part: feature:14411-16054:1:exon
subclass of: SO_0000010

5188034
type: Gene
SIO_000068: ncbigene

position:14411:1
position: 14411
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:16054:1
position: 16054
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:14411-16054:1:exon

CBO_RS18265
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 413999
locus tag: CBO_RS18265
old locus tag: CBOP19
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010964866.1
GO function: GO:0005524 - ATP binding [Evidence IEA]; GO:0042626 - ATPase-coupled transmembrane transporter activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ABC transporter ATP-binding protein
translation: MGKLRSLLKLKPFLQKYKLLLFFALIGIILGSIVAIPVPYIIGKIMDDVLIGSKSFNEFYFYIGIITILYVLKYFISITSNYLSSKFNNFMSNDLRFILIDKVMDLPMDYLANVEKGYLQGRISECDSITAIFSGTIISILLSTVNAVLSVSTMFVINYKLAIAVLILVPFFFILAKFSNHALTKNTKKMLEDSAILNAECFEIINGVEDIKILNGKAYSLGKFKKKLDQFIKITLKQNKTMLLLSQNVVGVNDVGTLLILLIAGNLIIKGEFTVGLYTTFSLYSSKIFSSTQLLANIGPSLKQACLSIERLYELIDMDDENKGKNKHLNKKIESIKLENVTFKYKNSIKNVLDSLNFEINKGEKVLISGENGTGKSTLIKLLVGLYEPTEGRILYNNLDLATINNESLRSRIGIVSQNMFLFKGTVLDNILYGQNQKKRKDVEKLIIKLNLENYISRLPEGLDSKIIQNNNGISGGQTQVIAFIRAVLSNKDIIILDEPISNVDAETRNIILNILKESKFDGILIIISHFTKGMEFINKTIKVGKK
SIO_010081: CBO_RS18265
subclass of: SO_0000673
so part of: CBO_RS18265
location: 14411..16054
location: region:14411-16054:1
so has part: feature:14411-16054:1:exon

WP_011949183.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:14411-16054:1:exon