Vibrio rarus strain LMG 23674 chromosome 2, complete sequence.
Bacteria; Pseudomonadota; Gammaproteobacteria; Vibrionales; Vibrionaceae; Vibrio.
Vibrio Clade 3.0: New Vibrionaceae Evolutionary Units Using Genome-Based Approach
DOI:10.1007/s00284-021-02725-0 Publication Status: Online-Only
Submitted (20-JUL-2021) Contact:Tomoo Sawabe Hokkaido University, Faculty of Fisheries Sciences; 3-1-1 Minato-cho, Hakodate, Hokkaido 041-8611, Japan
REFSEQ INFORMATION: The reference sequence is identical to\nAP024901.1.\nThe annotation was added by the NCBI Prokaryotic Genome Annotation\nPipeline (PGAP). Information about PGAP can be found here:\nhttps://www.ncbi.nlm.nih.gov/genome/annotation_prok/\n\n##Genome-Assembly-Data-START##\nAssembly Method :: Unicycler v. 0.4.8\nGenome Coverage :: 912x\nSequencing Technology :: Illumina MiSeq and Nanopore\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI RefSeq\nAnnotation Date :: 09/29/2022 10:20:39\nAnnotation Pipeline :: NCBI Prokaryotic Genome\n Annotation Pipeline (PGAP)\nAnnotation Method :: Best-placed reference protein\n set; GeneMarkS-2+\nAnnotation Software revision :: 6.3\nFeatures Annotated :: Gene; CDS; rRNA; tRNA; ncRNA;\n repeat_region\nGenes (total) :: 3,491\nCDSs (total) :: 3,351\nGenes (coding) :: 3,267\nCDSs (with protein) :: 3,267\nGenes (RNA) :: 140\nrRNAs :: 11, 10, 10 (5S, 16S, 23S)\ncomplete rRNAs :: 11, 10, 10 (5S, 16S, 23S)\ntRNAs :: 105\nncRNAs :: 4\nPseudo Genes (total) :: 84\nCDSs (without protein) :: 84\nPseudo Genes (ambiguous residues) :: 0 of 84\nPseudo Genes (frameshifted) :: 27 of 84\nPseudo Genes (incomplete) :: 71 of 84\nPseudo Genes (internal stop) :: 20 of 84\nPseudo Genes (multiple problems) :: 28 of 84\nCRISPR Arrays :: 1\n##Genome-Annotation-Data-END##\nCOMPLETENESS: full length.
COORDINATES: similar to AA sequence:RefSeq:WP_005381682.1
Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_017027950.1
COORDINATES: similar to AA sequence:RefSeq:WP_017243771.1
COORDINATES: similar to AA sequence:RefSeq:WP_017030177.1
COORDINATES: similar to AA sequence:RefSeq:WP_017188700.1
COORDINATES: similar to AA sequence:RefSeq:WP_017106201.1
COORDINATES: ab initio prediction:GeneMarkS-2+
Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
COORDINATES: similar to AA sequence:RefSeq:WP_004745674.1
COORDINATES: similar to AA sequence:RefSeq:WP_017027913.1
COORDINATES: similar to AA sequence:RefSeq:WP_017243464.1
GO:0052855 - ADP-dependent NAD(P)H-hydrate dehydratase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_008216394.1
GO:0003920 - GMP reductase activity [Evidence IEA]
GO:0009117 - nucleotide metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_006646969.1
COORDINATES: similar to AA sequence:RefSeq:WP_019439563.1
LytTR family DNA-binding domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_006228537.1
GO:0016021 - integral component of membrane [Evidence IEA]
GO:0000155 - phosphorelay sensor kinase activity [Evidence IEA]
GO:0000160 - phosphorelay signal transduction system [Evidence IEA]
LytS/YhcK type 5TM receptor domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_017032079.1
COORDINATES: similar to AA sequence:RefSeq:WP_017032084.1
COORDINATES: similar to AA sequence:RefSeq:WP_017032086.1
COORDINATES: similar to AA sequence:RefSeq:WP_005388506.1
bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase
COORDINATES: similar to AA sequence:RefSeq:WP_016791254.1
COORDINATES: similar to AA sequence:RefSeq:WP_005450851.1
COORDINATES: similar to AA sequence:RefSeq:WP_017032089.1
COORDINATES: similar to AA sequence:RefSeq:WP_016796101.1
GO:0016829 - lyase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_017027880.1
COORDINATES: similar to AA sequence:RefSeq:WP_017033910.1
GO:0015297 - antiporter activity [Evidence IEA]; GO:0042910 - xenobiotic transmembrane transporter activity [Evidence IEA]
GO:0055085 - transmembrane transport [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_017027878.1
FadR/GntR family transcriptional regulator
COORDINATES: similar to AA sequence:RefSeq:WP_010438385.1
COORDINATES: similar to AA sequence:RefSeq:WP_017069961.1
GO:0008773 - [protein-PII] uridylyltransferase activity [Evidence IEA]
DUF294 nucleotidyltransferase-like domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_017027875.1
COORDINATES: similar to AA sequence:RefSeq:WP_017027874.1
oligogalacturonate-specific porin KdgM family protein
COORDINATES: similar to AA sequence:RefSeq:WP_010438391.1
COORDINATES: protein motif:HMM:NF020367.2
COORDINATES: protein motif:HMM:NF017942.2
COORDINATES: similar to AA sequence:RefSeq:WP_017027869.1
COORDINATES: similar to AA sequence:RefSeq:WP_017072467.1
COORDINATES: similar to AA sequence:RefSeq:WP_017032105.1
COORDINATES: similar to AA sequence:RefSeq:WP_017027864.1
COORDINATES: protein motif:HMM:NF018095.2
COORDINATES: similar to AA sequence:RefSeq:WP_017027863.1
COORDINATES: similar to AA sequence:RefSeq:WP_017032108.1
COORDINATES: similar to AA sequence:RefSeq:WP_012534654.1
COORDINATES: similar to AA sequence:RefSeq:WP_005388499.1
SDR family NAD(P)-dependent oxidoreductase
COORDINATES: similar to AA sequence:RefSeq:WP_005598256.1
COORDINATES: similar to AA sequence:RefSeq:WP_012600251.1
GO:0004359 - glutaminase activity [Evidence IEA]; GO:0003952 - NAD+ synthase (glutamine-hydrolyzing) activity [Evidence IEA]; GO:0008795 - NAD+ synthase activity [Evidence IEA]
GO:0009435 - NAD biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_016798874.1
nicotinate-nicotinamide nucleotide adenylyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_017029588.1
COORDINATES: similar to AA sequence:RefSeq:WP_017243068.1
COORDINATES: similar to AA sequence:RefSeq:WP_017032355.1
GO:0016746 - acyltransferase activity [Evidence IEA]
1-acyl-sn-glycerol-3-phosphate acyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_004737752.1
COORDINATES: similar to AA sequence:RefSeq:WP_015312960.1
TetR/AcrR family transcriptional regulator
COORDINATES: similar to AA sequence:RefSeq:WP_008215675.1
COORDINATES: similar to AA sequence:RefSeq:WP_020196858.1
COORDINATES: similar to AA sequence:RefSeq:WP_017032348.1
COORDINATES: similar to AA sequence:RefSeq:WP_017101705.1
COORDINATES: similar to AA sequence:RefSeq:WP_000106983.1
COORDINATES: similar to AA sequence:RefSeq:WP_005479962.1
COORDINATES: similar to AA sequence:RefSeq:WP_017029574.1
COORDINATES: similar to AA sequence:RefSeq:WP_005476644.1
GO:0016787 - hydrolase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_017243076.1
COORDINATES: similar to AA sequence:RefSeq:WP_017036491.1
heavy metal-binding domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_017032340.1
COORDINATES: similar to AA sequence:RefSeq:WP_019274389.1
GO:0008890 - glycine C-acetyltransferase activity [Evidence IEA]; GO:0030170 - pyridoxal phosphate binding [Evidence IEA]
GO:0009058 - biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_020332488.1
GO:0008743 - L-threonine 3-dehydrogenase activity [Evidence IEA]
GO:0006567 - threonine catabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_017243091.1
COORDINATES: similar to AA sequence:RefSeq:WP_017058655.1
COORDINATES: similar to AA sequence:RefSeq:WP_016785129.1
GO:0005515 - protein binding [Evidence IEA]
GO:0006749 - glutathione metabolic process [Evidence IEA]
glutathione-dependent disulfide-bond oxidoreductase
COORDINATES: similar to AA sequence:RefSeq:WP_020332475.1
GO:0004345 - glucose-6-phosphate dehydrogenase activity [Evidence IEA]
GO:0006098 - pentose-phosphate shunt [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_016768676.1
GO:0017057 - 6-phosphogluconolactonase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_017080794.1
GO:0004616 - phosphogluconate dehydrogenase (decarboxylating) activity [Evidence IEA]
decarboxylating NADP(+)-dependent phosphogluconate dehydrogenase
COORDINATES: similar to AA sequence:RefSeq:WP_017032321.1
COORDINATES: similar to AA sequence:RefSeq:WP_008079366.1
GO:0016740 - transferase activity [Evidence IEA]
type B chloramphenicol O-acetyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_004743913.1
GO:0015501 - glutamate:sodium symporter activity [Evidence IEA]
GO:0015813 - L-glutamate transmembrane transport [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_017032318.1
helix-turn-helix transcriptional regulator
COORDINATES: similar to AA sequence:RefSeq:WP_017105180.1
COORDINATES: similar to AA sequence:RefSeq:WP_017028072.1
COORDINATES: similar to AA sequence:RefSeq:WP_002535746.1
COORDINATES: similar to AA sequence:RefSeq:WP_017028074.1
COORDINATES: similar to AA sequence:RefSeq:WP_017028076.1
COORDINATES: similar to AA sequence:RefSeq:WP_017243101.1
bifunctional UDP-sugar hydrolase/5'-nucleotidase
COORDINATES: similar to AA sequence:RefSeq:WP_017079198.1
COORDINATES: similar to AA sequence:RefSeq:WP_017042243.1
IS66 family insertion sequence element accessory protein TnpB
COORDINATES: protein motif:HMM:NF033819.0
incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_006228729.1
COORDINATES: similar to AA sequence:RefSeq:WP_069211897.1
GO:0004803 - transposase activity [Evidence IEA]
frameshifted; incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_006711471.1
COORDINATES: protein motif:HMM:NF016876.2
type II toxin-antitoxin system RelE/ParE family toxin
COORDINATES: similar to AA sequence:RefSeq:WP_009844714.1
GO:0008797 - aspartate ammonia-lyase activity [Evidence IEA]
GO:0006520 - cellular amino acid metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_010432215.1
COORDINATES: similar to AA sequence:RefSeq:WP_017032717.1
sulfite exporter TauE/SafE family protein
COORDINATES: similar to AA sequence:RefSeq:WP_017032716.1
aspartate aminotransferase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_017032715.1
PLP-dependent aminotransferase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_019821758.1
transporter substrate-binding domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_017032713.1
COORDINATES: similar to AA sequence:RefSeq:WP_016800450.1
COORDINATES: similar to AA sequence:RefSeq:WP_017028306.1
amino acid ABC transporter ATP-binding protein
COORDINATES: protein motif:HMM:NF013068.2
GO:0003677 - DNA binding [Evidence IEA]; GO:0004803 - transposase activity [Evidence IEA]
GO:0006313 - transposition, DNA-mediated [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_017243105.1
GO:0015288 - porin activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_017028084.1
COORDINATES: similar to AA sequence:RefSeq:WP_005592869.1
COORDINATES: similar to AA sequence:RefSeq:WP_017032305.1
COORDINATES: similar to AA sequence:RefSeq:WP_012128289.1
frameshifted; internal stop; incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_017071520.1
internal stop; incomplete; partial in the middle of a contig; missing N-terminus and C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
manganese-dependent inorganic pyrophosphatase
COORDINATES: similar to AA sequence:RefSeq:WP_017022278.1
COORDINATES: similar to AA sequence:RefSeq:WP_006069223.1
COORDINATES: similar to AA sequence:RefSeq:WP_000102411.1
COORDINATES: similar to AA sequence:RefSeq:WP_004411755.1
COORDINATES: similar to AA sequence:RefSeq:WP_017032295.1
GO:0016790 - thiolester hydrolase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_017032294.1
COORDINATES: similar to AA sequence:RefSeq:WP_017049563.1
COORDINATES: similar to AA sequence:RefSeq:WP_017243243.1
COORDINATES: similar to AA sequence:RefSeq:WP_017243244.1
COORDINATES: similar to AA sequence:RefSeq:WP_017243245.1
COORDINATES: similar to AA sequence:RefSeq:WP_017243246.1
COORDINATES: similar to AA sequence:RefSeq:WP_019274693.1
microcin C ABC transporter permease YejB
COORDINATES: similar to AA sequence:RefSeq:WP_017028111.1
COORDINATES: similar to AA sequence:RefSeq:WP_004731371.1
COORDINATES: similar to AA sequence:RefSeq:WP_012551862.1
COORDINATES: similar to AA sequence:RefSeq:WP_011847801.1
GO:0008080 - N-acetyltransferase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF019976.2
GO:0004812 - aminoacyl-tRNA ligase activity [Evidence IEA]; GO:0005524 - ATP binding [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]
GO:0006418 - tRNA aminoacylation for protein translation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_000993000.1
IS21-like element ISVch3 family helper ATPase IstB
COORDINATES: similar to AA sequence:RefSeq:WP_001907982.1
COORDINATES: similar to AA sequence:RefSeq:WP_001046279.1
COORDINATES: similar to AA sequence:RefSeq:WP_017098048.1
COORDINATES: similar to AA sequence:RefSeq:WP_019282658.1
GO:0003964 - RNA-directed DNA polymerase activity [Evidence IEA]
GO:0000373 - Group II intron splicing [Evidence IEA]
group II intron reverse transcriptase/maturase
COORDINATES: similar to AA sequence:RefSeq:WP_012128066.1
IS66 family transposase zinc-finger binding domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_020195530.1
COORDINATES: similar to AA sequence:RefSeq:WP_012564931.1
nuclear transport factor 2 family protein
COORDINATES: protein motif:HMM:NF024950.2
COORDINATES: similar to AA sequence:RefSeq:WP_009844736.1
COORDINATES: similar to AA sequence:RefSeq:WP_017029637.1
COORDINATES: similar to AA sequence:RefSeq:WP_016961369.1
COORDINATES: protein motif:HMM:NF012655.2
COORDINATES: protein motif:HMM:NF015431.2
COORDINATES: protein motif:HMM:NF017206.2
COORDINATES: protein motif:HMM:NF012451.2
COORDINATES: similar to AA sequence:RefSeq:WP_017013428.1
COORDINATES: protein motif:HMM:NF018028.2
COORDINATES: similar to AA sequence:RefSeq:WP_006711789.1
COORDINATES: similar to AA sequence:RefSeq:WP_020194685.1
COORDINATES: protein motif:HMM:NF015925.2
COORDINATES: similar to AA sequence:RefSeq:WP_006711788.1
COORDINATES: similar to AA sequence:RefSeq:WP_017069692.1
COORDINATES: similar to AA sequence:RefSeq:WP_017087617.1
COORDINATES: similar to AA sequence:RefSeq:WP_009703030.1
enoyl-CoA hydratase/isomerase family protein
COORDINATES: protein motif:HMM:NF012334.2
COORDINATES: similar to AA sequence:RefSeq:WP_005442127.1
COORDINATES: similar to AA sequence:RefSeq:WP_006229128.1
COORDINATES: similar to AA sequence:RefSeq:WP_017062689.1
COORDINATES: similar to AA sequence:RefSeq:WP_017094839.1
COORDINATES: similar to AA sequence:RefSeq:WP_006881336.1
COORDINATES: similar to AA sequence:RefSeq:WP_017028453.1
COORDINATES: similar to AA sequence:RefSeq:WP_006069542.1
COORDINATES: similar to AA sequence:RefSeq:WP_006069543.1
COORDINATES: similar to AA sequence:RefSeq:WP_017028456.1
COORDINATES: similar to AA sequence:RefSeq:WP_017031595.1
COORDINATES: similar to AA sequence:RefSeq:WP_017028458.1
GO:0043190 - ATP-binding cassette (ABC) transporter complex [Evidence IEA]
GO:0015417 - ABC-type polyamine transporter activity [Evidence IEA]; GO:0005524 - ATP binding [Evidence IEA]; GO:0022857 - transmembrane transporter activity [Evidence IEA]
GO:0015846 - polyamine transport [Evidence IEA]; GO:0055085 - transmembrane transport [Evidence IEA]
putrescine ABC transporter ATP-binding subunit PotG
COORDINATES: similar to AA sequence:RefSeq:WP_017243648.1
putrescine ABC transporter permease PotH
COORDINATES: similar to AA sequence:RefSeq:WP_017028460.1
COORDINATES: similar to AA sequence:RefSeq:WP_004414610.1
COORDINATES: similar to AA sequence:RefSeq:WP_017028462.1
COORDINATES: similar to AA sequence:RefSeq:WP_017031590.1
COORDINATES: similar to AA sequence:RefSeq:WP_006069552.1
COORDINATES: similar to AA sequence:RefSeq:WP_006069553.1
CoA-acylating methylmalonate-semialdehyde dehydrogenase
COORDINATES: similar to AA sequence:RefSeq:WP_017243643.1
Members of this family of hydrolases with an active site Cys residue belong to MEROPS family C26.; Members of this family of hydrolases with an active site Cys residue belong to MEROPS family C26; Derived by automated computational analysis using gene prediction method: Protein Homology.
gamma-glutamyl-gamma-aminobutyrate hydrolase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_001114075.1
frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_012551882.1
COORDINATES: similar to AA sequence:RefSeq:WP_012600705.1
frameshifted; incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_076612096.1
COORDINATES: protein motif:HMM:NF014044.2
Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
COORDINATES: similar to AA sequence:RefSeq:WP_076611668.1
COORDINATES: protein motif:HMM:NF017528.2
TnpB, as the term is used for proteins encoded by IS66 family insertion elements, is considered an accessory protein, since TnpC, encoded by a neighboring gene, is a DDE family transposase; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_016785054.1
COORDINATES: similar to AA sequence:RefSeq:WP_010429783.1
nitrous oxide-stimulated promoter family protein
COORDINATES: similar to AA sequence:RefSeq:WP_006071344.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0003676 - nucleic acid binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_017028115.1
COORDINATES: similar to AA sequence:RefSeq:WP_017028117.1
COORDINATES: similar to AA sequence:RefSeq:WP_017026791.1
GO:0008770 - [acyl-carrier-protein] phosphodiesterase activity [Evidence IEA]
GO:0006633 - fatty acid biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_017026790.1
COORDINATES: similar to AA sequence:RefSeq:WP_017243252.1
COORDINATES: similar to AA sequence:RefSeq:WP_017029915.1
COORDINATES: similar to AA sequence:RefSeq:WP_017029916.1
GO:0042626 - ATPase-coupled transmembrane transporter activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_005525670.1
COORDINATES: similar to AA sequence:RefSeq:WP_020196909.1
COORDINATES: similar to AA sequence:RefSeq:WP_017243256.1
COORDINATES: similar to AA sequence:RefSeq:WP_010644099.1
trans-2-enoyl-CoA reductase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_019829569.1
COORDINATES: similar to AA sequence:RefSeq:WP_017032269.1
COORDINATES: similar to AA sequence:RefSeq:WP_017029924.1
COORDINATES: similar to AA sequence:RefSeq:WP_017032267.1
biotin-dependent carboxyltransferase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_017029926.1
carboxyltransferase domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_017243262.1
COORDINATES: similar to AA sequence:RefSeq:WP_017243263.1
GO:0003978 - UDP-glucose 4-epimerase activity [Evidence IEA]
GO:0006012 - galactose metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_017243265.1
bifunctional acetate--CoA ligase family protein/GNAT family N-acetyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_017243266.1
GO:0042834 - peptidoglycan binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_017029932.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0008716 - D-alanine-D-alanine ligase activity [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_017029933.1
GO:0015074 - DNA integration [Evidence IEA]; GO:0006310 - DNA recombination [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004738001.1
stress response translation initiation inhibitor YciH
COORDINATES: similar to AA sequence:RefSeq:WP_017106736.1
COORDINATES: similar to AA sequence:RefSeq:WP_012551717.1
COORDINATES: protein motif:HMM:NF013632.2
GO:0004190 - aspartic-type endopeptidase activity [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR03177.1
COORDINATES: similar to AA sequence:RefSeq:WP_005306838.1
pilus assembly protein N-terminal domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_012551723.1
COORDINATES: similar to AA sequence:RefSeq:WP_006710390.1
type II secretion system F family protein
COORDINATES: similar to AA sequence:RefSeq:WP_005417737.1
COORDINATES: similar to AA sequence:RefSeq:WP_005470592.1
COORDINATES: protein motif:HMM:NF012894.2
COORDINATES: similar to AA sequence:RefSeq:WP_017078752.1
COORDINATES: similar to AA sequence:RefSeq:WP_017029941.1
COORDINATES: similar to AA sequence:RefSeq:WP_017029942.1
COORDINATES: similar to AA sequence:RefSeq:WP_005599733.1
COORDINATES: similar to AA sequence:RefSeq:WP_010451774.1
COORDINATES: similar to AA sequence:RefSeq:WP_016785255.1
GO:0008750 - NAD(P)+ transhydrogenase (AB-specific) activity [Evidence IEA]; GO:0050661 - NADP binding [Evidence IEA]
Re/Si-specific NAD(P)(+) transhydrogenase subunit beta
COORDINATES: similar to AA sequence:RefSeq:WP_019830217.1
GO:0008750 - NAD(P)+ transhydrogenase (AB-specific) activity [Evidence IEA]
Re/Si-specific NAD(P)(+) transhydrogenase subunit alpha
COORDINATES: similar to AA sequence:RefSeq:WP_010451768.1
COORDINATES: similar to AA sequence:RefSeq:WP_017029948.1
Solitary outer membrane autotransporter beta-barrel domain
COORDINATES: similar to AA sequence:RefSeq:WP_017029949.1
COORDINATES: similar to AA sequence:RefSeq:WP_017029950.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0015098 - molybdate ion transmembrane transporter activity [Evidence IEA]
GO:0015689 - molybdate ion transport [Evidence IEA]
molybdenum ABC transporter ATP-binding protein ModC
COORDINATES: similar to AA sequence:RefSeq:WP_004726752.1
GO:0015098 - molybdate ion transmembrane transporter activity [Evidence IEA]
molybdate ABC transporter permease subunit
COORDINATES: similar to AA sequence:RefSeq:WP_017243282.1
GO:0031362 - anchored component of external side of plasma membrane [Evidence IEA]; GO:0055052 - ATP-binding cassette (ABC) transporter complex, substrate-binding subunit-containing [Evidence IEA]; GO:0030288 - outer membrane-bounded periplasmic space [Evidence IEA]
GO:0015412 - ABC-type molybdate transporter activity [Evidence IEA]; GO:0030973 - molybdate ion binding [Evidence IEA]
molybdate ABC transporter substrate-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_004731052.1
COORDINATES: similar to AA sequence:RefSeq:WP_017029954.1
COORDINATES: similar to AA sequence:RefSeq:WP_006878109.1
GO:0051539 - 4 iron, 4 sulfur cluster binding [Evidence IEA]; GO:0043365 - [formate-C-acetyltransferase]-activating enzyme activity [Evidence IEA]
anaerobic ribonucleoside-triphosphate reductase-activating protein
COORDINATES: similar to AA sequence:RefSeq:WP_019275881.1
GO:0008998 - ribonucleoside-triphosphate reductase activity [Evidence IEA]
GO:0006260 - DNA replication [Evidence IEA]
anaerobic ribonucleoside-triphosphate reductase
COORDINATES: similar to AA sequence:RefSeq:WP_017243286.1
endonuclease/exonuclease/phosphatase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_017032241.1
COORDINATES: similar to AA sequence:RefSeq:WP_017029959.1
YeeE/YedE thiosulfate transporter family protein
COORDINATES: similar to AA sequence:RefSeq:WP_004396686.1
COORDINATES: similar to AA sequence:RefSeq:WP_017058245.1
COORDINATES: similar to AA sequence:RefSeq:WP_017029965.1
COORDINATES: similar to AA sequence:RefSeq:WP_017032235.1
COORDINATES: protein motif:HMM:NF024811.2
GO:0008152 - metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_005364079.1
COORDINATES: similar to AA sequence:RefSeq:WP_017046075.1
COORDINATES: similar to AA sequence:RefSeq:WP_017028190.1
GO:0015035 - protein-disulfide reductase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012129065.1
FKBP-type peptidyl-prolyl cis-trans isomerase
COORDINATES: similar to AA sequence:RefSeq:WP_017243300.1
beta-phosphoglucomutase family hydrolase
COORDINATES: similar to AA sequence:RefSeq:WP_017032227.1
heme NO-binding domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_017032226.1
COORDINATES: similar to AA sequence:RefSeq:WP_017243303.1
COORDINATES: similar to AA sequence:RefSeq:WP_017028182.1
COORDINATES: similar to AA sequence:RefSeq:WP_014232107.1
COORDINATES: similar to AA sequence:RefSeq:WP_017243306.1
COORDINATES: similar to AA sequence:RefSeq:WP_017243307.1
COORDINATES: similar to AA sequence:RefSeq:WP_017243308.1
sigma-54 dependent transcriptional regulator
COORDINATES: similar to AA sequence:RefSeq:WP_017028177.1
COORDINATES: similar to AA sequence:RefSeq:WP_017032218.1
COORDINATES: protein motif:HMM:NF012744.2
COORDINATES: similar to AA sequence:RefSeq:WP_017028172.1
COORDINATES: similar to AA sequence:RefSeq:WP_020197384.1
COORDINATES: similar to AA sequence:RefSeq:WP_005473765.1
COORDINATES: similar to AA sequence:RefSeq:WP_017073225.1
COORDINATES: similar to AA sequence:RefSeq:WP_017243316.1
GO:0009103 - lipopolysaccharide biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_053404615.1
incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: protein motif:HMM:NF012956.2
COORDINATES: similar to AA sequence:RefSeq:WP_000054941.1
COORDINATES: similar to AA sequence:RefSeq:WP_004743187.1
glycine betaine ABC transporter substrate-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_017031606.1
COORDINATES: similar to AA sequence:RefSeq:WP_017243318.1
COORDINATES: similar to AA sequence:RefSeq:WP_017028147.1
COORDINATES: similar to AA sequence:RefSeq:WP_017024689.1
internal stop; incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_011154650.1
TnpB, as the term is used for proteins encoded by IS66 family insertion elements, is considered an accessory protein, since TnpC, encoded by a neighboring gene, is a DDE family transposase.; TnpB, as the term is used for proteins encoded by IS66 family insertion elements, is considered an accessory protein, since TnpC, encoded by a neighboring gene, is a DDE family transposase; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_017052232.1
COORDINATES: similar to AA sequence:RefSeq:WP_017032177.1
COORDINATES: similar to AA sequence:RefSeq:WP_017028137.1
COORDINATES: similar to AA sequence:RefSeq:WP_017028136.1
COORDINATES: similar to AA sequence:RefSeq:WP_017028135.1
COORDINATES: similar to AA sequence:RefSeq:WP_017028134.1
COORDINATES: similar to AA sequence:RefSeq:WP_017032170.1
COORDINATES: similar to AA sequence:RefSeq:WP_017243062.1
GO:0004851 - uroporphyrin-III C-methyltransferase activity [Evidence IEA]
GO:0019354 - siroheme biosynthetic process [Evidence IEA]
uroporphyrinogen-III C-methyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_017076010.1
formate/nitrite transporter family protein
COORDINATES: similar to AA sequence:RefSeq:WP_005387969.1
COORDINATES: similar to AA sequence:RefSeq:WP_017028129.1
GO:0050660 - flavin adenine dinucleotide binding [Evidence IEA]; GO:0050661 - NADP binding [Evidence IEA]; GO:0008942 - nitrite reductase [NAD(P)H] activity [Evidence IEA]; GO:0016491 - oxidoreductase activity [Evidence IEA]
GO:0042128 - nitrate assimilation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_017050411.1
COORDINATES: similar to AA sequence:RefSeq:WP_004412452.1
COORDINATES: similar to AA sequence:RefSeq:WP_007463503.1
GO:0004000 - adenosine deaminase activity [Evidence IEA]
GO:0043101 - purine-containing compound salvage [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_017032163.1
COORDINATES: similar to AA sequence:RefSeq:WP_008219322.1
COORDINATES: similar to AA sequence:RefSeq:WP_017032156.1
GO:0046872 - metal ion binding [Evidence IEA]
SEC-C metal-binding domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_006881118.1
COORDINATES: similar to AA sequence:RefSeq:WP_017032154.1
COORDINATES: similar to AA sequence:RefSeq:WP_004744582.1
GO:0008859 - exoribonuclease II activity [Evidence IEA]
GO:0006401 - RNA catabolic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF024242.2
COORDINATES: similar to AA sequence:RefSeq:WP_019612776.1
GO:0046872 - metal ion binding [Evidence IEA]; GO:0016491 - oxidoreductase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF016999.2
COORDINATES: protein motif:HMM:NF012707.2
COORDINATES: protein motif:HMM:NF012738.2
COORDINATES: similar to AA sequence:RefSeq:WP_004398740.1
COORDINATES: similar to AA sequence:RefSeq:WP_017028666.1
RNA-binding S4 domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_017032148.1
COORDINATES: protein motif:HMM:NF025679.2
COORDINATES: similar to AA sequence:RefSeq:WP_017032146.1
COORDINATES: similar to AA sequence:RefSeq:WP_017030129.1
GO:0004451 - isocitrate lyase activity [Evidence IEA]
GO:0019752 - carboxylic acid metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_017030128.1
GO:0004474 - malate synthase activity [Evidence IEA]
GO:0006097 - glyoxylate cycle [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_017100964.1
COORDINATES: similar to AA sequence:RefSeq:WP_017109998.1
COORDINATES: similar to AA sequence:RefSeq:WP_008221742.1
GO:0003700 - DNA-binding transcription factor activity [Evidence IEA]
GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
metalloregulator ArsR/SmtB family transcription factor
COORDINATES: similar to AA sequence:RefSeq:WP_008221740.1
COORDINATES: protein motif:HMM:NF022590.2
COORDINATES: similar to AA sequence:RefSeq:WP_017243200.1
cytochrome c-type biogenesis protein CcmH
COORDINATES: similar to AA sequence:RefSeq:WP_017032032.1
COORDINATES: similar to AA sequence:RefSeq:WP_005471703.1
cytochrome c nitrite reductase subunit NrfD
COORDINATES: similar to AA sequence:RefSeq:WP_017072498.1
cytochrome c nitrite reductase Fe-S protein
COORDINATES: similar to AA sequence:RefSeq:WP_017027947.1
GO:0042597 - periplasmic space [Evidence IEA]
GO:0006807 - nitrogen compound metabolic process [Evidence IEA]
cytochrome c nitrite reductase pentaheme subunit
COORDINATES: similar to AA sequence:RefSeq:WP_017032028.1
GO:0042279 - nitrite reductase (cytochrome, ammonia-forming) activity [Evidence IEA]
ammonia-forming nitrite reductase cytochrome c552 subunit
COORDINATES: similar to AA sequence:RefSeq:WP_017032027.1
COORDINATES: protein motif:HMM:NF020432.2
GO:0004427 - inorganic diphosphate phosphatase activity [Evidence IEA]; GO:0000287 - magnesium ion binding [Evidence IEA]
GO:0006796 - phosphate-containing compound metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_010431406.1
COORDINATES: similar to AA sequence:RefSeq:WP_016799459.1
COORDINATES: similar to AA sequence:RefSeq:WP_016784303.1
COORDINATES: similar to AA sequence:RefSeq:WP_016787325.1
GO:0005215 - transporter activity [Evidence IEA]
efflux RND transporter periplasmic adaptor subunit
COORDINATES: protein motif:HMM:NF017183.2
COORDINATES: similar to AA sequence:RefSeq:WP_020198000.1
COORDINATES: protein motif:HMM:NF012320.2
COORDINATES: protein motif:HMM:NF024676.2
COORDINATES: protein motif:HMM:NF025639.2
COORDINATES: similar to AA sequence:RefSeq:WP_005592926.1
COORDINATES: similar to AA sequence:RefSeq:WP_005502564.1
penicillin-binding protein activator LpoB
COORDINATES: similar to AA sequence:RefSeq:WP_005592929.1
COORDINATES: similar to AA sequence:RefSeq:WP_005393743.1
COORDINATES: similar to AA sequence:RefSeq:WP_017030125.1
GO:0004789 - thiamine-phosphate diphosphorylase activity [Evidence IEA]
GO:0009228 - thiamine biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_017030124.1
GO:0004417 - hydroxyethylthiazole kinase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_017030123.1
GO:0050334 - thiaminase activity [Evidence IEA]
GO:0006772 - thiamine metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_017032139.1
ABC transporter substrate-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_017032138.1
COORDINATES: similar to AA sequence:RefSeq:WP_017030120.1
COORDINATES: similar to AA sequence:RefSeq:WP_012600944.1
COORDINATES: similar to AA sequence:RefSeq:WP_017032135.1
GO:0008902 - hydroxymethylpyrimidine kinase activity [Evidence IEA]; GO:0008972 - phosphomethylpyrimidine kinase activity [Evidence IEA]
bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase
COORDINATES: nucleotide motif:Rfam:14.4:RF00059
TPP riboswitch; Derived by automated computational analysis using gene prediction method: cmsearch.
COORDINATES: similar to AA sequence:RefSeq:WP_006071410.1
COORDINATES: similar to AA sequence:RefSeq:WP_006071411.1
COORDINATES: similar to AA sequence:RefSeq:WP_017030116.1
COORDINATES: similar to AA sequence:RefSeq:WP_017032130.1
COORDINATES: similar to AA sequence:RefSeq:WP_011081796.1
COORDINATES: similar to AA sequence:RefSeq:WP_017032128.1
COORDINATES: similar to AA sequence:RefSeq:WP_017032122.1
COORDINATES: similar to AA sequence:RefSeq:WP_017030099.1
COORDINATES: similar to AA sequence:RefSeq:WP_017061474.1
COORDINATES: similar to AA sequence:RefSeq:WP_017032118.1
COORDINATES: similar to AA sequence:RefSeq:WP_017045407.1
GO:0009982 - pseudouridine synthase activity [Evidence IEA]
GO:0001522 - pseudouridine synthesis [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_015296649.1
COORDINATES: protein motif:HMM:TIGR00254.1
sensor domain-containing diguanylate cyclase
COORDINATES: protein motif:HMM:NF012772.2
COORDINATES: similar to AA sequence:RefSeq:WP_017243066.1
COORDINATES: similar to AA sequence:RefSeq:WP_017243065.1
GO:0004151 - dihydroorotase activity [Evidence IEA]
GO:0009220 - pyrimidine ribonucleotide biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_000139400.1
GO:0004370 - glycerol kinase activity [Evidence IEA]
GO:0006071 - glycerol metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_017032363.1
GO:0008878 - glucose-1-phosphate adenylyltransferase activity [Evidence IEA]
GO:0005978 - glycogen biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_017029595.1
COORDINATES: similar to AA sequence:RefSeq:WP_008215575.1
phosphate ABC transporter substrate-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_005452183.1
COORDINATES: similar to AA sequence:RefSeq:WP_017032367.1
COORDINATES: similar to AA sequence:RefSeq:WP_019826217.1
COORDINATES: similar to AA sequence:RefSeq:WP_017243063.1
COORDINATES: similar to AA sequence:RefSeq:WP_017243671.1
COORDINATES: similar to AA sequence:RefSeq:WP_017032371.1
isoamylase early set domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_017243672.1
COORDINATES: similar to AA sequence:RefSeq:WP_017243676.1
COORDINATES: similar to AA sequence:RefSeq:WP_017028681.1
COORDINATES: similar to AA sequence:RefSeq:WP_010649352.1
GO:0008662 - 1-phosphofructokinase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_000189159.1
GO:0016491 - oxidoreductase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004749487.1
COORDINATES: similar to AA sequence:RefSeq:WP_019825074.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0003676 - nucleic acid binding [Evidence IEA]; GO:0003724 - RNA helicase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_017243690.1
COORDINATES: similar to AA sequence:RefSeq:WP_017032392.1
COORDINATES: similar to AA sequence:RefSeq:WP_017028700.1
COORDINATES: similar to AA sequence:RefSeq:WP_017028701.1
peptidoglycan DD-metalloendopeptidase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_017028702.1
COORDINATES: similar to AA sequence:RefSeq:WP_017028703.1
COORDINATES: similar to AA sequence:RefSeq:WP_001252025.1
COORDINATES: similar to AA sequence:RefSeq:WP_008215800.1
COORDINATES: similar to AA sequence:RefSeq:WP_000786217.1
GO:0015144 - carbohydrate transmembrane transporter activity [Evidence IEA]
GO:0008643 - carbohydrate transport [Evidence IEA]; GO:0055085 - transmembrane transport [Evidence IEA]
maltose/maltodextrin ABC transporter substrate-binding protein MalE
COORDINATES: similar to AA sequence:RefSeq:WP_017032400.1
GO:0140359 - ABC-type transporter activity [Evidence IEA]; GO:0005524 - ATP binding [Evidence IEA]
maltose/maltodextrin ABC transporter ATP-binding protein MalK
COORDINATES: similar to AA sequence:RefSeq:WP_017032402.1
COORDINATES: similar to AA sequence:RefSeq:WP_017032403.1
GO:0030288 - outer membrane-bounded periplasmic space [Evidence IEA]
GO:0071555 - cell wall organization [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_017032404.1
COORDINATES: similar to AA sequence:RefSeq:WP_017032405.1
COORDINATES: similar to AA sequence:RefSeq:WP_004411388.1
COORDINATES: similar to AA sequence:RefSeq:WP_005452851.1
GO:0055052 - ATP-binding cassette (ABC) transporter complex, substrate-binding subunit-containing [Evidence IEA]; GO:0009898 - cytoplasmic side of plasma membrane [Evidence IEA]
GO:0005524 - ATP binding [Evidence IEA]; GO:0015415 - ATPase-coupled phosphate ion transmembrane transporter activity [Evidence IEA]
phosphate ABC transporter ATP-binding protein PstB
COORDINATES: similar to AA sequence:RefSeq:WP_014234910.1
GO:0055052 - ATP-binding cassette (ABC) transporter complex, substrate-binding subunit-containing [Evidence IEA]; GO:0005887 - integral component of plasma membrane [Evidence IEA]
GO:0015415 - ATPase-coupled phosphate ion transmembrane transporter activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_017028718.1
phosphate ABC transporter permease subunit PstC
COORDINATES: similar to AA sequence:RefSeq:WP_010451068.1
COORDINATES: similar to AA sequence:RefSeq:WP_017028658.1
COORDINATES: similar to AA sequence:RefSeq:WP_017028657.1
Lpp/OprI family alanine-zipper lipoprotein
COORDINATES: similar to AA sequence:RefSeq:WP_017028656.1
COORDINATES: similar to AA sequence:RefSeq:WP_017032410.1
COORDINATES: similar to AA sequence:RefSeq:WP_017028654.1
DUF523 and DUF1722 domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_017243236.1
COORDINATES: similar to AA sequence:RefSeq:WP_017032413.1
COORDINATES: similar to AA sequence:RefSeq:WP_005470026.1
COORDINATES: similar to AA sequence:RefSeq:WP_011082384.1
COORDINATES: similar to AA sequence:RefSeq:WP_017028649.1
GO:0022857 - transmembrane transporter activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_017032415.1
GO:0005451 - monovalent cation:proton antiporter activity [Evidence IEA]
GO:0006812 - cation transport [Evidence IEA]; GO:1902600 - proton transmembrane transport [Evidence IEA]
monovalent cation:proton antiporter-2 (CPA2) family protein
COORDINATES: similar to AA sequence:RefSeq:WP_011220628.1
COORDINATES: similar to AA sequence:RefSeq:WP_017028646.1
GO:0015297 - antiporter activity [Evidence IEA]
GO:0006814 - sodium ion transport [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_017032418.1
COORDINATES: similar to AA sequence:RefSeq:WP_017820124.1
COORDINATES: similar to AA sequence:RefSeq:WP_017032420.1
COORDINATES: similar to AA sequence:RefSeq:WP_005469445.1
COORDINATES: similar to AA sequence:RefSeq:WP_017028641.1
COORDINATES: similar to AA sequence:RefSeq:WP_006879732.1
COORDINATES: similar to AA sequence:RefSeq:WP_017031421.1
COORDINATES: similar to AA sequence:RefSeq:WP_017027374.1
D-Ala-D-Ala carboxypeptidase family metallohydrolase
COORDINATES: similar to AA sequence:RefSeq:WP_001927723.1
GO:0051539 - 4 iron, 4 sulfur cluster binding [Evidence IEA]; GO:1904047 - S-adenosyl-L-methionine binding [Evidence IEA]
GO:0006400 - tRNA modification [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_005598753.1
GO:0003824 - catalytic activity [Evidence IEA]
GO:0008616 - queuosine biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_017031426.1
COORDINATES: similar to AA sequence:RefSeq:WP_017031427.1
COORDINATES: similar to AA sequence:RefSeq:WP_008218671.1
COORDINATES: similar to AA sequence:RefSeq:WP_017040157.1
COORDINATES: similar to AA sequence:RefSeq:WP_017027385.1
COORDINATES: similar to AA sequence:RefSeq:WP_008079224.1
GO:0003844 - 1,4-alpha-glucan branching enzyme activity [Evidence IEA]; GO:0043169 - cation binding [Evidence IEA]; GO:0004553 - hydrolase activity, hydrolyzing O-glycosyl compounds [Evidence IEA]
GO:0005975 - carbohydrate metabolic process [Evidence IEA]; GO:0005978 - glycogen biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_005374838.1
GO:0004134 - 4-alpha-glucanotransferase activity [Evidence IEA]
GO:0005975 - carbohydrate metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_000805367.1
glycogen/starch/alpha-glucan phosphorylase
COORDINATES: similar to AA sequence:RefSeq:WP_000264940.1
GO:0003677 - DNA binding [Evidence IEA]; GO:0005515 - protein binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_019282749.1
nucleoside-diphosphate sugar epimerase/dehydratase
COORDINATES: similar to AA sequence:RefSeq:WP_011261051.1
NAD-dependent epimerase/dehydratase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_020195827.1
COORDINATES: protein motif:HMM:NF012745.2
COORDINATES: protein motif:HMM:NF016852.2
COORDINATES: protein motif:HMM:NF027681.2
COORDINATES: similar to AA sequence:RefSeq:WP_010448737.1
COORDINATES: protein motif:HMM:NF016145.2
polysaccharide pyruvyl transferase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_006229500.1
internal stop; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_001292293.1
COORDINATES: similar to AA sequence:RefSeq:WP_017031499.1
GO:0016780 - phosphotransferase activity, for other substituted phosphate groups [Evidence IEA]
GO:0009246 - enterobacterial common antigen biosynthetic process [Evidence IEA]
UDP-N-acetylglucosamine--undecaprenyl-phosphate N-acetylglucosaminephosphotransferase
COORDINATES: similar to AA sequence:RefSeq:WP_008220941.1
GO:0016668 - oxidoreductase activity, acting on a sulfur group of donors, NAD(P) as acceptor [Evidence IEA]
GO:0009398 - FMN biosynthetic process [Evidence IEA]; GO:0006805 - xenobiotic metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_017629768.1
GO:0102039 - NADH-dependent peroxiredoxin activity [Evidence IEA]
GO:0006979 - response to oxidative stress [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_017633502.1
COORDINATES: similar to AA sequence:RefSeq:WP_000512925.1
COORDINATES: similar to AA sequence:RefSeq:WP_001963895.1
COORDINATES: similar to AA sequence:RefSeq:WP_005464459.1
frameshifted; internal stop; Derived by automated computational analysis using gene prediction method: Protein Homology.
type II toxin-antitoxin system YoeB family toxin
COORDINATES: similar to AA sequence:RefSeq:WP_012519136.1
type II toxin-antitoxin system Phd/YefM family antitoxin
COORDINATES: similar to AA sequence:RefSeq:WP_005301013.1
type II toxin-antitoxin system HipA family toxin
COORDINATES: similar to AA sequence:RefSeq:WP_017034177.1
type II toxin-antitoxin system antitoxin HipB
COORDINATES: similar to AA sequence:RefSeq:WP_012533814.1
helix-turn-helix domain-containing protein
COORDINATES: protein motif:HMM:NF025442.2
COORDINATES: protein motif:HMM:NF013921.2
COORDINATES: protein motif:HMM:NF019421.2
COORDINATES: protein motif:HMM:NF016330.2
GO:0008270 - zinc ion binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_017031458.1
COORDINATES: similar to AA sequence:RefSeq:WP_076611686.1
programmed frameshift; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_001963881.1
COORDINATES: similar to AA sequence:RefSeq:WP_017041491.1
COORDINATES: similar to AA sequence:RefSeq:WP_017034174.1
COORDINATES: similar to AA sequence:RefSeq:WP_016786893.1
type II toxin-antitoxin system HigB family toxin
COORDINATES: protein motif:HMM:NF017885.2
COORDINATES: similar to AA sequence:RefSeq:WP_076612150.1
COORDINATES: similar to AA sequence:RefSeq:WP_016794242.1
COORDINATES: similar to AA sequence:RefSeq:WP_017100444.1
COORDINATES: similar to AA sequence:RefSeq:WP_013571357.1
HipA N-terminal domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_011079938.1
COORDINATES: similar to AA sequence:RefSeq:WP_076611745.1
COORDINATES: similar to AA sequence:RefSeq:WP_010320665.1
internal stop; incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_004249763.1
COORDINATES: similar to AA sequence:RefSeq:WP_020198017.1
COORDINATES: similar to AA sequence:RefSeq:WP_017420534.1
COORDINATES: similar to AA sequence:RefSeq:WP_017243217.1
COORDINATES: similar to AA sequence:RefSeq:WP_017029552.1
COORDINATES: similar to AA sequence:RefSeq:WP_017029551.1
COORDINATES: similar to AA sequence:RefSeq:WP_017029550.1
COORDINATES: similar to AA sequence:RefSeq:WP_016785058.1
COORDINATES: similar to AA sequence:RefSeq:WP_016768882.1
GO:0003983 - UTP:glucose-1-phosphate uridylyltransferase activity [Evidence IEA]
GO:0009225 - nucleotide-sugar metabolic process [Evidence IEA]
UTP--glucose-1-phosphate uridylyltransferase GalU
COORDINATES: similar to AA sequence:RefSeq:WP_014230643.1
catalyzes the formation of UDP-glucuronate from UDP-glucose; incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
catalyzes the formation of UDP-glucuronate from UDP-glucose; internal stop; incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_016796643.1
COORDINATES: similar to AA sequence:RefSeq:WP_011221259.1
COORDINATES: similar to AA sequence:RefSeq:WP_076611923.1
COORDINATES: protein motif:HMM:NF014051.2
COORDINATES: similar to AA sequence:RefSeq:WP_005597034.1
GO:0008830 - dTDP-4-dehydrorhamnose 3,5-epimerase activity [Evidence IEA]
GO:0019305 - dTDP-rhamnose biosynthetic process [Evidence IEA]; GO:0009243 - O antigen biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_008219167.1
GO:0008831 - dTDP-4-dehydrorhamnose reductase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_016791501.1
GO:0008879 - glucose-1-phosphate thymidylyltransferase activity [Evidence IEA]
glucose-1-phosphate thymidylyltransferase RfbA
COORDINATES: similar to AA sequence:RefSeq:WP_014230608.1
GO:0008460 - dTDP-glucose 4,6-dehydratase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_016787293.1
COORDINATES: similar to AA sequence:RefSeq:WP_086557930.1
COORDINATES: similar to AA sequence:RefSeq:WP_011494826.1
COORDINATES: similar to AA sequence:RefSeq:WP_017242644.1
GO:0045226 - extracellular polysaccharide biosynthetic process [Evidence IEA]
polysaccharide biosynthesis tyrosine autokinase
COORDINATES: similar to AA sequence:RefSeq:WP_006232900.1
Wzb shows phosphatase activity towards the autophosphorylated Wzc protein, which induces colanic acid biosynthesis; catalyzes the phosphorylation of UDP-glucose dehydrogenase, an enzyme involved in colanic acid biosynthesis; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_017028515.1
COORDINATES: similar to AA sequence:RefSeq:WP_006228626.1
bile acid:sodium symporter family protein
COORDINATES: similar to AA sequence:RefSeq:WP_004404577.1
COORDINATES: similar to AA sequence:RefSeq:WP_017031981.1
COORDINATES: similar to AA sequence:RefSeq:WP_017105060.1
GO:0008929 - methylglyoxal synthase activity [Evidence IEA]
GO:0019242 - methylglyoxal biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_017031976.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0003677 - DNA binding [Evidence IEA]; GO:0003678 - DNA helicase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004409066.1
COORDINATES: similar to AA sequence:RefSeq:WP_017029885.1
COORDINATES: similar to AA sequence:RefSeq:WP_005422127.1
COORDINATES: similar to AA sequence:RefSeq:WP_017029883.1
COORDINATES: similar to AA sequence:RefSeq:WP_017029882.1
GO:0005887 - integral component of plasma membrane [Evidence IEA]
GO:0009410 - response to xenobiotic stimulus [Evidence IEA]; GO:0006855 - xenobiotic transmembrane transport [Evidence IEA]
DHA2 family efflux MFS transporter permease subunit
COORDINATES: similar to AA sequence:RefSeq:WP_017031969.1
COORDINATES: similar to AA sequence:RefSeq:WP_017031968.1
LuxQ periplasmic sensor domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_017029878.1
substrate-binding domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_017242970.1
COORDINATES: similar to AA sequence:RefSeq:WP_016800198.1
COORDINATES: similar to AA sequence:RefSeq:WP_004730049.1
COORDINATES: similar to AA sequence:RefSeq:WP_017242976.1
COORDINATES: similar to AA sequence:RefSeq:WP_017031964.1
COORDINATES: similar to AA sequence:RefSeq:WP_017031956.1
COORDINATES: similar to AA sequence:RefSeq:WP_001200838.1
COORDINATES: similar to AA sequence:RefSeq:WP_016792731.1
COORDINATES: similar to AA sequence:RefSeq:WP_006710458.1
GO:0010181 - FMN binding [Evidence IEA]; GO:0004457 - lactate dehydrogenase activity [Evidence IEA]
GO:0006089 - lactate metabolic process [Evidence IEA]
FMN-dependent L-lactate dehydrogenase LldD
COORDINATES: similar to AA sequence:RefSeq:WP_015728196.1
FAD-binding and (Fe-S)-binding domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_017635194.1
GO:0015562 - efflux transmembrane transporter activity [Evidence IEA]
GO:0055085 - transmembrane transport [Evidence IEA]; GO:0042908 - xenobiotic transport [Evidence IEA]
multidrug efflux RND transporter permease subunit
COORDINATES: similar to AA sequence:RefSeq:WP_017074835.1
COORDINATES: similar to AA sequence:RefSeq:WP_017031950.1
COORDINATES: similar to AA sequence:RefSeq:WP_017791024.1
COORDINATES: similar to AA sequence:RefSeq:WP_017031948.1
COORDINATES: similar to AA sequence:RefSeq:WP_015728286.1
GO:0004556 - alpha-amylase activity [Evidence IEA]
GO:0030980 - alpha-glucan catabolic process [Evidence IEA]; GO:0051692 - cellular oligosaccharide catabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_005451357.1
COORDINATES: similar to AA sequence:RefSeq:WP_006074762.1
COORDINATES: similar to AA sequence:RefSeq:WP_004733541.1
GO:0009034 - tryptophanase activity [Evidence IEA]
GO:0006568 - tryptophan metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_006233090.1
GO:0015173 - aromatic amino acid transmembrane transporter activity [Evidence IEA]
GO:0015801 - aromatic amino acid transport [Evidence IEA]
COORDINATES: protein motif:HMM:NF012376.2
GO:0009166 - nucleotide catabolic process [Evidence IEA]
5'-nucleotidase C-terminal domain-containing protein
COORDINATES: protein motif:HMM:NF033681.1
ExeM/NucH family extracellular endonuclease
COORDINATES: similar to AA sequence:RefSeq:WP_017243146.1
COORDINATES: similar to AA sequence:RefSeq:WP_017031934.1
COORDINATES: similar to AA sequence:RefSeq:WP_017029838.1
GO:0043190 - ATP-binding cassette (ABC) transporter complex [Evidence IEA]; GO:0016020 - membrane [Evidence IEA]
GO:0005524 - ATP binding [Evidence IEA]; GO:0022857 - transmembrane transporter activity [Evidence IEA]
GO:0015846 - polyamine transport [Evidence IEA]
spermidine/putrescine ABC transporter ATP-binding protein PotA
COORDINATES: similar to AA sequence:RefSeq:WP_010320265.1
spermidine/putrescine ABC transporter permease PotB
COORDINATES: similar to AA sequence:RefSeq:WP_000533750.1
spermidine/putrescine ABC transporter permease PotC
COORDINATES: similar to AA sequence:RefSeq:WP_017634903.1
COORDINATES: protein motif:HMM:NF021440.2
COORDINATES: protein motif:HMM:NF013760.2
MotA/TolQ/ExbB proton channel family protein
COORDINATES: protein motif:HMM:NF014563.2
COORDINATES: protein motif:HMM:NF012801.2
COORDINATES: similar to AA sequence:RefSeq:WP_017448514.1
COORDINATES: similar to AA sequence:RefSeq:WP_016959962.1
COORDINATES: similar to AA sequence:RefSeq:WP_017019953.1
COORDINATES: similar to AA sequence:RefSeq:WP_017243138.1
COORDINATES: similar to AA sequence:RefSeq:WP_017031924.1
COORDINATES: similar to AA sequence:RefSeq:WP_009845406.1
COORDINATES: similar to AA sequence:RefSeq:WP_017029849.1
COORDINATES: similar to AA sequence:RefSeq:WP_011263089.1
COORDINATES: similar to AA sequence:RefSeq:WP_017031921.1
COORDINATES: similar to AA sequence:RefSeq:WP_004730068.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0016887 - ATP hydrolysis activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_017031919.1
COORDINATES: similar to AA sequence:RefSeq:WP_017031917.1
COORDINATES: similar to AA sequence:RefSeq:WP_017029858.1
GO:0003746 - translation elongation factor activity [Evidence IEA]
GO:0043043 - peptide biosynthetic process [Evidence IEA]; GO:0006414 - translational elongation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_017029859.1
COORDINATES: similar to AA sequence:RefSeq:WP_004735656.1
COORDINATES: similar to AA sequence:RefSeq:WP_019820614.1
GO:0046933 - proton-transporting ATP synthase activity, rotational mechanism [Evidence IEA]
GO:0015986 - proton motive force-driven ATP synthesis [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012600782.1
GO:0000275 - mitochondrial proton-transporting ATP synthase complex, catalytic sector F(1) [Evidence IEA]; GO:0045262 - plasma membrane proton-transporting ATP synthase complex, catalytic core F(1) [Evidence IEA]; GO:0045261 - proton-transporting ATP synthase complex, catalytic core F(1) [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_017031657.1
GO:0045261 - proton-transporting ATP synthase complex, catalytic core F(1) [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_017028202.1
COORDINATES: similar to AA sequence:RefSeq:WP_017082382.1
COORDINATES: similar to AA sequence:RefSeq:WP_004741166.1
GO:0015078 - proton transmembrane transporter activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_005306237.1
COORDINATES: similar to AA sequence:RefSeq:WP_011220228.1
GO:0045263 - proton-transporting ATP synthase complex, coupling factor F(o) [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_017028206.1
COORDINATES: similar to AA sequence:RefSeq:WP_017031660.1
COORDINATES: similar to AA sequence:RefSeq:WP_017031663.1
COORDINATES: similar to AA sequence:RefSeq:WP_004733000.1
GO:0022626 - cytosolic ribosome [Evidence IEA]; GO:0005840 - ribosome [Evidence IEA]
GO:0045182 - translation regulator activity [Evidence IEA]
GO:0009386 - translational attenuation [Evidence IEA]
ribosome-associated translation inhibitor RaiA
COORDINATES: similar to AA sequence:RefSeq:WP_016791914.1
COORDINATES: similar to AA sequence:RefSeq:WP_017026999.1
COORDINATES: similar to AA sequence:RefSeq:WP_017027000.1
COORDINATES: similar to AA sequence:RefSeq:WP_017243751.1
GO:0016772 - transferase activity, transferring phosphorus-containing groups [Evidence IEA]
phosphoethanolamine--lipid A transferase
COORDINATES: similar to AA sequence:RefSeq:WP_017085618.1
TRAP transporter substrate-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_017027006.1
COORDINATES: similar to AA sequence:RefSeq:WP_017024409.1
COORDINATES: similar to AA sequence:RefSeq:WP_019821702.1
COORDINATES: similar to AA sequence:RefSeq:WP_017790710.1
GO:0015379 - potassium:chloride symporter activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_005390487.1
COORDINATES: similar to AA sequence:RefSeq:WP_002537693.1
COORDINATES: similar to AA sequence:RefSeq:WP_006880386.1
COORDINATES: similar to AA sequence:RefSeq:WP_017031694.1
COORDINATES: protein motif:HMM:NF019335.2
TonB-dependent receptor plug domain-containing protein
COORDINATES: protein motif:HMM:NF017044.2
COORDINATES: protein motif:HMM:NF017775.2
ABC transporter ATP-binding protein/permease
COORDINATES: similar to AA sequence:RefSeq:WP_017821829.1
COORDINATES: similar to AA sequence:RefSeq:WP_010646825.1
COORDINATES: protein motif:HMM:TIGR00278.2
membrane protein insertion efficiency factor YidD
COORDINATES: similar to AA sequence:RefSeq:WP_005447484.1
COORDINATES: protein motif:HMM:NF024116.2
COORDINATES: similar to AA sequence:RefSeq:WP_003232356.1
COORDINATES: protein motif:HMM:TIGR01730.1
COORDINATES: similar to AA sequence:RefSeq:WP_017031711.1
COORDINATES: similar to AA sequence:RefSeq:WP_013856659.1
COORDINATES: similar to AA sequence:RefSeq:WP_017030214.1
COORDINATES: similar to AA sequence:RefSeq:WP_006962070.1
COORDINATES: similar to AA sequence:RefSeq:WP_017030217.1
COORDINATES: similar to AA sequence:RefSeq:WP_017632308.1
LysR substrate-binding domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_017028441.1
COORDINATES: similar to AA sequence:RefSeq:WP_006070096.1
COORDINATES: similar to AA sequence:RefSeq:WP_017630327.1
COORDINATES: similar to AA sequence:RefSeq:WP_017028438.1
COORDINATES: similar to AA sequence:RefSeq:WP_005464874.1
YebC/PmpR family DNA-binding transcriptional regulator
COORDINATES: similar to AA sequence:RefSeq:WP_017028435.1
COORDINATES: similar to AA sequence:RefSeq:WP_000026551.1
COORDINATES: similar to AA sequence:RefSeq:WP_017028432.1
COORDINATES: similar to AA sequence:RefSeq:WP_001897070.1
COORDINATES: similar to AA sequence:RefSeq:WP_017028430.1
COORDINATES: similar to AA sequence:RefSeq:WP_017028429.1
GO:0007059 - chromosome segregation [Evidence IEA]; GO:0000910 - cytokinesis [Evidence IEA]
ParB/RepB/Spo0J family partition protein
COORDINATES: similar to AA sequence:RefSeq:WP_017243718.1
mechanosensitive ion channel family protein
COORDINATES: similar to AA sequence:RefSeq:WP_017028427.1
COORDINATES: similar to AA sequence:RefSeq:WP_017031750.1
COORDINATES: similar to AA sequence:RefSeq:WP_017028422.1
GO:0030253 - protein secretion by the type I secretion system [Evidence IEA]
HlyD family type I secretion periplasmic adaptor subunit
COORDINATES: similar to AA sequence:RefSeq:WP_005522748.1
GO:0010181 - FMN binding [Evidence IEA]; GO:0004733 - pyridoxamine-phosphate oxidase activity [Evidence IEA]
GO:0008615 - pyridoxine biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012535126.1
COORDINATES: similar to AA sequence:RefSeq:WP_017243710.1
COORDINATES: nucleotide motif:Rfam:14.4:RF00174
cobalamin riboswitch; Derived by automated computational analysis using gene prediction method: cmsearch.
COORDINATES: similar to AA sequence:RefSeq:WP_017243709.1
GO:0003842 - 1-pyrroline-5-carboxylate dehydrogenase activity [Evidence IEA]; GO:0003700 - DNA-binding transcription factor activity [Evidence IEA]; GO:0016620 - oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor [Evidence IEA]; GO:0004657 - proline dehydrogenase activity [Evidence IEA]
GO:0010133 - proline catabolic process to glutamate [Evidence IEA]; GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
bifunctional proline dehydrogenase/L-glutamate gamma-semialdehyde dehydrogenase PutA
COORDINATES: similar to AA sequence:RefSeq:WP_017031758.1
COORDINATES: similar to AA sequence:RefSeq:WP_017031759.1
COORDINATES: protein motif:HMM:NF015605.2
COORDINATES: similar to AA sequence:RefSeq:WP_012604364.1
COORDINATES: similar to AA sequence:RefSeq:WP_009847480.1
COORDINATES: similar to AA sequence:RefSeq:WP_017031761.1
COORDINATES: similar to AA sequence:RefSeq:WP_017031762.1
COORDINATES: similar to AA sequence:RefSeq:WP_004407023.1
GO:0015109 - chromate transmembrane transporter activity [Evidence IEA]
GO:0015703 - chromate transport [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_010441167.1
COORDINATES: similar to AA sequence:RefSeq:WP_006878467.1
GO:0003849 - 3-deoxy-7-phosphoheptulonate synthase activity [Evidence IEA]
GO:0009073 - aromatic amino acid family biosynthetic process [Evidence IEA]
3-deoxy-7-phosphoheptulonate synthase AroG
COORDINATES: similar to AA sequence:RefSeq:WP_017031767.1
carboxymuconolactone decarboxylase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_017028541.1
GO:0009015 - N-succinylarginine dihydrolase activity [Evidence IEA]
GO:0006527 - arginine catabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_017031775.1
GO:0008791 - arginine N-succinyltransferase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_017031776.1
COORDINATES: similar to AA sequence:RefSeq:WP_017243667.1
COORDINATES: similar to AA sequence:RefSeq:WP_017028537.1
COORDINATES: similar to AA sequence:RefSeq:WP_017031779.1
GO:0004133 - glycogen debranching enzyme activity [Evidence IEA]
GO:0005980 - glycogen catabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_010431678.1
COORDINATES: similar to AA sequence:RefSeq:WP_017031781.1
GO:0008643 - carbohydrate transport [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_017031784.1
COORDINATES: similar to AA sequence:RefSeq:WP_005369011.1
COORDINATES: similar to AA sequence:RefSeq:WP_017243053.1
COORDINATES: similar to AA sequence:RefSeq:WP_017031791.1
COORDINATES: similar to AA sequence:RefSeq:WP_017031792.1
COORDINATES: similar to AA sequence:RefSeq:WP_017028028.1
GO:0003908 - methylated-DNA-[protein]-cysteine S-methyltransferase activity [Evidence IEA]
methylated-DNA--[protein]-cysteine S-methyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_010647188.1
COORDINATES: similar to AA sequence:RefSeq:WP_017028031.1
COORDINATES: similar to AA sequence:RefSeq:WP_017052956.1
GO:0004129 - cytochrome-c oxidase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_017028033.1
COORDINATES: similar to AA sequence:RefSeq:WP_017028034.1
COORDINATES: similar to AA sequence:RefSeq:WP_004730084.1
COORDINATES: similar to AA sequence:RefSeq:WP_017028036.1
COORDINATES: similar to AA sequence:RefSeq:WP_017028037.1
COORDINATES: similar to AA sequence:RefSeq:WP_017031799.1
COORDINATES: similar to AA sequence:RefSeq:WP_017028039.1
COORDINATES: similar to AA sequence:RefSeq:WP_006878462.1
GO:0008495 - protoheme IX farnesyltransferase activity [Evidence IEA]
GO:0006783 - heme biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_017023873.1
RpiB/LacA/LacB family sugar-phosphate isomerase
COORDINATES: similar to AA sequence:RefSeq:WP_010319178.1
COORDINATES: similar to AA sequence:RefSeq:WP_017031805.1
COORDINATES: similar to AA sequence:RefSeq:WP_017028048.1
COORDINATES: similar to AA sequence:RefSeq:WP_004413229.1
COORDINATES: similar to AA sequence:RefSeq:WP_005428276.1
COORDINATES: similar to AA sequence:RefSeq:WP_017243043.1
COORDINATES: similar to AA sequence:RefSeq:WP_017634139.1
homocysteine S-methyltransferase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_017026975.1
COORDINATES: similar to AA sequence:RefSeq:WP_017031823.1
COORDINATES: similar to AA sequence:RefSeq:WP_017026969.1
COORDINATES: similar to AA sequence:RefSeq:WP_017031824.1
GO:0004400 - histidinol-phosphate transaminase activity [Evidence IEA]
GO:0000105 - histidine biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_017031825.1
COORDINATES: similar to AA sequence:RefSeq:WP_017243378.1
COORDINATES: similar to AA sequence:RefSeq:WP_017243377.1
COORDINATES: similar to AA sequence:RefSeq:WP_017048974.1
COORDINATES: similar to AA sequence:RefSeq:WP_017031850.1
COORDINATES: similar to AA sequence:RefSeq:WP_017028558.1
COORDINATES: similar to AA sequence:RefSeq:WP_017046059.1
COORDINATES: similar to AA sequence:RefSeq:WP_010646166.1
COORDINATES: protein motif:HMM:NF024895.2
COORDINATES: similar to AA sequence:RefSeq:WP_006069629.1
heme-binding beta-barrel domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_016766783.1
GO:0009055 - electron transfer activity [Evidence IEA]; GO:0020037 - heme binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_010643707.1
cbb3-type cytochrome c oxidase subunit II
COORDINATES: similar to AA sequence:RefSeq:WP_006069309.1
cytochrome-c oxidase, cbb3-type subunit I
COORDINATES: similar to AA sequence:RefSeq:WP_017028590.1
COORDINATES: similar to AA sequence:RefSeq:WP_017031883.1
COORDINATES: similar to AA sequence:RefSeq:WP_017028592.1
COORDINATES: similar to AA sequence:RefSeq:WP_007461903.1
COORDINATES: similar to AA sequence:RefSeq:WP_017031886.1
GO:0051537 - 2 iron, 2 sulfur cluster binding [Evidence IEA]; GO:0008942 - nitrite reductase [NAD(P)H] activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_017111876.1
GO:0015514 - nitrite efflux transmembrane transporter activity [Evidence IEA]
GO:0015707 - nitrite transport [Evidence IEA]
NarK family nitrate/nitrite MFS transporter
COORDINATES: similar to AA sequence:RefSeq:WP_017031887.1
bifunctional protein-serine/threonine kinase/phosphatase
COORDINATES: similar to AA sequence:RefSeq:WP_017243116.1
COORDINATES: similar to AA sequence:RefSeq:WP_017243119.1
COORDINATES: similar to AA sequence:RefSeq:WP_017028601.1
COORDINATES: similar to AA sequence:RefSeq:WP_010440385.1
nitrogenase-stabilizing/protective protein NifW
COORDINATES: similar to AA sequence:RefSeq:WP_017028602.1
COORDINATES: similar to AA sequence:RefSeq:WP_017028604.1
alanine/glycine:cation symporter family protein
COORDINATES: similar to AA sequence:RefSeq:WP_017028605.1
COORDINATES: similar to AA sequence:RefSeq:WP_017243120.1
MarR family winged helix-turn-helix transcriptional regulator
COORDINATES: similar to AA sequence:RefSeq:WP_017633352.1
COORDINATES: similar to AA sequence:RefSeq:WP_017027692.1
GO:0004375 - glycine dehydrogenase (decarboxylating) activity [Evidence IEA]
GO:0019464 - glycine decarboxylation via glycine cleavage system [Evidence IEA]
aminomethyl-transferring glycine dehydrogenase
COORDINATES: similar to AA sequence:RefSeq:WP_000361810.1
COORDINATES: similar to AA sequence:RefSeq:WP_005478414.1
COORDINATES: similar to AA sequence:RefSeq:WP_009599481.1
GO:0004047 - aminomethyltransferase activity [Evidence IEA]
GO:0006546 - glycine catabolic process [Evidence IEA]
glycine cleavage system aminomethyltransferase GcvT
COORDINATES: protein motif:HMM:NF025943.2
chondroitinase-B domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_017030475.1
COORDINATES: similar to AA sequence:RefSeq:WP_016796865.1
GO:0004519 - endonuclease activity [Evidence IEA]; GO:0003676 - nucleic acid binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_008219482.1
incomplete; partial in the middle of a contig; missing N-terminus and C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_005423855.1
COORDINATES: similar to AA sequence:RefSeq:WP_017243637.1
COORDINATES: similar to AA sequence:RefSeq:WP_017243636.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0004329 - formate-tetrahydrofolate ligase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_016769156.1
GO:0051539 - 4 iron, 4 sulfur cluster binding [Evidence IEA]; GO:0003941 - L-serine ammonia-lyase activity [Evidence IEA]
GO:0009063 - cellular amino acid catabolic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF012514.2
COORDINATES: similar to AA sequence:RefSeq:WP_017094603.1
COORDINATES: similar to AA sequence:RefSeq:WP_017029512.1
COORDINATES: similar to AA sequence:RefSeq:WP_017243006.1
COORDINATES: similar to AA sequence:RefSeq:WP_005597725.1
COORDINATES: similar to AA sequence:RefSeq:WP_005599797.1
COORDINATES: similar to AA sequence:RefSeq:WP_011999177.1
GO:0050194 - phosphonoacetaldehyde hydrolase activity [Evidence IEA]
GO:0019700 - organic phosphonate catabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_017029508.1
GO:0030170 - pyridoxal phosphate binding [Evidence IEA]; GO:0008483 - transaminase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_019274428.1
GO:0047304 - 2-aminoethylphosphonate-pyruvate transaminase activity [Evidence IEA]
2-aminoethylphosphonate--pyruvate transaminase
COORDINATES: similar to AA sequence:RefSeq:WP_017029506.1
GO:0033226 - 2-aminoethylphosphonate binding [Evidence IEA]; GO:0033225 - ATPase-coupled 2-aminoethylphosphonate transporter activity [Evidence IEA]
GO:0033223 - 2-aminoethylphosphonate transport [Evidence IEA]
putative 2-aminoethylphosphonate ABC transporter substrate-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_017031552.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0033225 - ATPase-coupled 2-aminoethylphosphonate transporter activity [Evidence IEA]
putative 2-aminoethylphosphonate ABC transporter ATP-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_017031551.1
GO:0033225 - ATPase-coupled 2-aminoethylphosphonate transporter activity [Evidence IEA]
putative 2-aminoethylphosphonate ABC transporter permease subunit
COORDINATES: similar to AA sequence:RefSeq:WP_005481525.1
phosphonate utilization transcriptional regulator PhnR
COORDINATES: similar to AA sequence:RefSeq:WP_017242997.1
COORDINATES: similar to AA sequence:RefSeq:WP_017021299.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0042626 - ATPase-coupled transmembrane transporter activity [Evidence IEA]
ABC transporter transmembrane domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_017075715.1
COORDINATES: similar to AA sequence:RefSeq:WP_017075716.1
COORDINATES: similar to AA sequence:RefSeq:WP_016240531.1
COORDINATES: protein motif:HMM:NF037016.2
COORDINATES: similar to AA sequence:RefSeq:WP_017032913.1
COORDINATES: similar to AA sequence:RefSeq:WP_017023633.1
ATP-binding cassette domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_005419718.1
COORDINATES: similar to AA sequence:RefSeq:WP_017031541.1
COORDINATES: similar to AA sequence:RefSeq:WP_017109844.1
COORDINATES: similar to AA sequence:RefSeq:WP_017031524.1
GO:0004020 - adenylylsulfate kinase activity [Evidence IEA]
GO:0006790 - sulfur compound metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_017242642.1
COORDINATES: similar to AA sequence:RefSeq:WP_017031521.1
GO:0005525 - GTP binding [Evidence IEA]; GO:0003924 - GTPase activity [Evidence IEA]
sulfate adenylyltransferase subunit CysN
COORDINATES: similar to AA sequence:RefSeq:WP_004738750.1
GO:0004781 - sulfate adenylyltransferase (ATP) activity [Evidence IEA]
GO:0019419 - sulfate reduction [Evidence IEA]
sulfate adenylyltransferase subunit CysD
COORDINATES: similar to AA sequence:RefSeq:WP_017031990.1
heme ABC transporter ATP-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_017031991.1
COORDINATES: similar to AA sequence:RefSeq:WP_017029901.1
COORDINATES: similar to AA sequence:RefSeq:WP_005419087.1
COORDINATES: similar to AA sequence:RefSeq:WP_017031994.1
COORDINATES: similar to AA sequence:RefSeq:WP_017242952.1
COORDINATES: similar to AA sequence:RefSeq:WP_017242951.1
GO:0003824 - catalytic activity [Evidence IEA]; GO:0051536 - iron-sulfur cluster binding [Evidence IEA]
heme anaerobic degradation radical SAM methyltransferase ChuW/HutW
COORDINATES: similar to AA sequence:RefSeq:WP_017031997.1
heme utilization cystosolic carrier protein HutX
COORDINATES: similar to AA sequence:RefSeq:WP_017242949.1
GO:0020037 - heme binding [Evidence IEA]
GO:0042167 - heme catabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_005502522.1
COORDINATES: similar to AA sequence:RefSeq:WP_017032001.1
COORDINATES: similar to AA sequence:RefSeq:WP_017029912.1
COORDINATES: similar to AA sequence:RefSeq:WP_016787972.1
COORDINATES: similar to AA sequence:RefSeq:WP_010429656.1
GO:0019867 - outer membrane [Evidence IEA]
TonB-dependent hemoglobin/transferrin/lactoferrin family receptor
COORDINATES: similar to AA sequence:RefSeq:WP_017242639.1
COORDINATES: similar to AA sequence:RefSeq:WP_017022609.1
COORDINATES: similar to AA sequence:RefSeq:WP_004726435.1
GO:0015276 - ligand-gated ion channel activity [Evidence IEA]
lysine/arginine/ornithine ABC transporter substrate-binding protein
COORDINATES: protein motif:HMM:NF002964.0
ArgP/LysG family DNA-binding transcriptional regulator
COORDINATES: protein motif:HMM:NF012703.2
COORDINATES: similar to AA sequence:RefSeq:WP_009706605.1
COORDINATES: similar to AA sequence:RefSeq:WP_005463357.1
COORDINATES: protein motif:HMM:NF014816.2
glutathione S-transferase N-terminal domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_017029913.1
COORDINATES: similar to AA sequence:RefSeq:WP_017028721.1
COORDINATES: similar to AA sequence:RefSeq:WP_017032003.1
COORDINATES: similar to AA sequence:RefSeq:WP_017032004.1
nitrate reductase cytochrome c-type subunit
COORDINATES: similar to AA sequence:RefSeq:WP_017069142.1
GO:0009325 - nitrate reductase complex [Evidence IEA]
GO:0008940 - nitrate reductase activity [Evidence IEA]
GO:0042126 - nitrate metabolic process [Evidence IEA]
periplasmic nitrate reductase subunit alpha
COORDINATES: similar to AA sequence:RefSeq:WP_017028725.1
COORDINATES: similar to AA sequence:RefSeq:WP_006230910.1
GO:0051539 - 4 iron, 4 sulfur cluster binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_017243186.1
GO:0000155 - phosphorelay sensor kinase activity [Evidence IEA]; GO:0046983 - protein dimerization activity [Evidence IEA]
nitrate/nitrite two-component system sensor histidine kinase NarQ
COORDINATES: similar to AA sequence:RefSeq:WP_017028727.1
COORDINATES: similar to AA sequence:RefSeq:WP_017028728.1
COORDINATES: similar to AA sequence:RefSeq:WP_017243188.1
GO:0004801 - transaldolase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_017053244.1
GO:0008641 - ubiquitin-like modifier activating enzyme activity [Evidence IEA]
GO:0006777 - Mo-molybdopterin cofactor biosynthetic process [Evidence IEA]
molybdopterin-synthase adenylyltransferase MoeB
COORDINATES: similar to AA sequence:RefSeq:WP_019822860.1
GO:0006777 - Mo-molybdopterin cofactor biosynthetic process [Evidence IEA]; GO:0032324 - molybdopterin cofactor biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_010318518.1
GO:0003934 - GTP cyclohydrolase I activity [Evidence IEA]
GO:0046654 - tetrahydrofolate biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_005435620.1
COORDINATES: similar to AA sequence:RefSeq:WP_004743139.1
GO:0005247 - voltage-gated chloride channel activity [Evidence IEA]
GO:0006821 - chloride transport [Evidence IEA]; GO:0055085 - transmembrane transport [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_010320211.1
COORDINATES: similar to AA sequence:RefSeq:WP_017027966.1
COORDINATES: similar to AA sequence:RefSeq:WP_017052798.1
GO:0042254 - ribosome biogenesis [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_010431064.1