Borrelia recurrentis A1 plasmid pl53, complete sequence.
type: Entry
definition: Borrelia recurrentis A1 plasmid pl53, complete sequence.
sequence version: NC_011260.1
sequence date: 2022-12-28
sequence: sequence
division: CON
label: NC_011260.1
type: RefSeq
SIO_000068: refseq
dblink: PRJNA224116
dblink: SAMN02603586
keyword: RefSeq
source: Borrelia recurrentis A1
organism: Borrelia recurrentis A1
taxonomy: Bacteria; Spirochaetota; Spirochaetia; Spirochaetales; Borreliaceae; Borrelia.
reference: 1
reference: 2
comment: REFSEQ INFORMATION: The reference sequence is identical to\nCP000999.1.\nDNA/Bacteria source is available for Michel Drancourt, Unite de\nRecherche sur les Maladies Infectieuses et Tropicales Emergentes,\nFaculte de Medecine, Marseille, France:\nmichel.drancourt@medecine.univ-mrs.fr\nPlasmid sequence lacks part of the telomeres.\nThe annotation was added by the NCBI Prokaryotic Genome Annotation\nPipeline (PGAP). Information about PGAP can be found here:\nhttps://www.ncbi.nlm.nih.gov/genome/annotation_prok/\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI RefSeq\nAnnotation Date :: 12/28/2022 01:15:04\nAnnotation Pipeline :: NCBI Prokaryotic Genome\n Annotation Pipeline (PGAP)\nAnnotation Method :: Best-placed reference protein\n set; GeneMarkS-2+\nAnnotation Software revision :: 6.4\nFeatures Annotated :: Gene; CDS; rRNA; tRNA; ncRNA\nGenes (total) :: 1,230\nCDSs (total) :: 1,192\nGenes (coding) :: 1,099\nCDSs (with protein) :: 1,099\nGenes (RNA) :: 38\nrRNAs :: 1, 1, 1 (5S, 16S, 23S)\ncomplete rRNAs :: 1, 1, 1 (5S, 16S, 23S)\ntRNAs :: 32\nncRNAs :: 3\nPseudo Genes (total) :: 93\nCDSs (without protein) :: 93\nPseudo Genes (ambiguous residues) :: 0 of 93\nPseudo Genes (frameshifted) :: 59 of 93\nPseudo Genes (incomplete) :: 46 of 93\nPseudo Genes (internal stop) :: 32 of 93\nPseudo Genes (multiple problems) :: 35 of 93\n##Genome-Annotation-Data-END##\nCOMPLETENESS: full length.

sequence
subclass of: SO_0000155
sequence length: 52772
topology: linear
so has quality: SO_0000987
location: 1..52772
location: region:1-52772:1
RO_0002162: 412418

NC_011260
type: RefSeq
SIO_000068: refseq

PRJNA224116
type: BioProject
SIO_000068: bioproject

SAMN02603586
type: BioSample
SIO_000068: biosample

1
title: The genome of Borrelia recurrentis, the agent of deadly louse-borne relapsing fever, is a degradated subset of tick-borne Borrelia duttonii
author: Lescot, M.
author: Audic, S.
author: Robert, C.
author: Nguyen, T.
author: Blanc, g.
author: Cutler, S.J.
author: Wincker, P.
author: Couloux, A.
author: Claverie, J.-M.
author: Raoult, D.
author: Drancourt, M.
journal: PLoS 4 (9), e1000185 (2008)
comments: Publication Status: Online-Only

2
title: Direct Submission
author: Audic, S.
journal: Submitted (17-MAR-2008) Institut de Biologie structurale et Microbiologie (IBSM), CNRS-Information Genomique et structurale, CNRS - UPR2589, Parc Scientifique de Luminy - 163 Avenue de Luminy - Case 934 FR-13288, Marseille cedex 09, France

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:52772:1
position: 52772
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-52772:1:source
so part of: sequence
organism: Borrelia recurrentis A1
mol type: genomic DNA
strain: A1
plasmid: pl53

412418
type: Taxonomy
SIO_000068: taxonomy

BRE_RS05500
type: Gene
subclass of: SO_0000704
RO_0002162: 412418
locus tag: BRE_RS05500
old locus tag: BRE_2001
pseudo: true
so part of: sequence
location: complement(<85..400)
location: region:85-400:-1
so has part: feature:85-400:-1:exon
subclass of: SO_0000010

position:85:-1
position: 85
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

position:400:-1
position: 400
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:85-400:-1:exon

BRE_RS05500
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 412418
locus tag: BRE_RS05500
old locus tag: BRE_2001
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012539666.1
note: frameshifted; internal stop; incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: vlp protein, beta subfamily
SIO_010081: BRE_RS05500
subclass of: SO_0000673
so part of: BRE_RS05500
location: complement(<85..400)
location: region:85-400:-1
so has part: feature:85-400:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:85-400:-1:exon

BRE_RS05505
type: Gene
subclass of: SO_0000704
RO_0002162: 412418
gene: bdr
locus tag: BRE_RS05505
old locus tag: BRE_2002
so part of: sequence
location: complement(850..1386)
location: region:850-1386:-1
so has part: feature:850-1386:-1:exon
subclass of: SO_0000010

position:850:-1
position: 850
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1386:-1
position: 1386
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:850-1386:-1:exon

BRE_RS05505
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 412418
gene: bdr
locus tag: BRE_RS05505
old locus tag: BRE_2002
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014683343.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: Bdr family repetitive protein
translation: MEYMMQPVVTRQMVLNELVKVGINREIADDLSYRYYKNELTIKDLEYLKENFDIKLKHLEEKIFDIKEELISRIDNKFNEVDNKIDNVRSELRSDIRDLDKKIDTVKHDLKSTIKELDNKMNTIENNFNIKIDTKFNELDTKIEINKMELNSKLKLHNWMFGTIITITVGILLTLIFK
SIO_010081: BRE_RS05505
subclass of: SO_0000673
so part of: BRE_RS05505
location: complement(850..1386)
location: region:850-1386:-1
so has part: feature:850-1386:-1:exon

WP_012539718.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:850-1386:-1:exon

BRE_RS05510
type: Gene
subclass of: SO_0000704
RO_0002162: 412418
locus tag: BRE_RS05510
old locus tag: BRE_2003
pseudo: true
so part of: sequence
location: complement(1829..2542)
location: region:1829-2542:-1
so has part: feature:1829-2542:-1:exon
subclass of: SO_0000010

position:1829:-1
position: 1829
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2542:-1
position: 2542
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1829-2542:-1:exon

BRE_RS05510
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 412418
locus tag: BRE_RS05510
old locus tag: BRE_2003
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014023152.1
note: frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: RNA-guided endonuclease TnpB family protein
SIO_010081: BRE_RS05510
subclass of: SO_0000673
so part of: BRE_RS05510
location: complement(1829..2542)
location: region:1829-2542:-1
so has part: feature:1829-2542:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1829-2542:-1:exon

BRE_RS06115
type: Gene
subclass of: SO_0000704
RO_0002162: 412418
gene: tnpA
locus tag: BRE_RS06115
pseudo: true
so part of: sequence
location: 2582..2987
location: region:2582-2987:1
so has part: feature:2582-2987:1:exon
subclass of: SO_0000010

position:2582:1
position: 2582
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2987:1
position: 2987
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2582-2987:1:exon

BRE_RS06115
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 412418
gene: tnpA
locus tag: BRE_RS06115
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014074302.1
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: IS200/IS605 family transposase
SIO_010081: BRE_RS06115
subclass of: SO_0000673
so part of: BRE_RS06115
location: 2582..2987
location: region:2582-2987:1
so has part: feature:2582-2987:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2582-2987:1:exon

BRE_RS05515
type: Gene
subclass of: SO_0000704
RO_0002162: 412418
locus tag: BRE_RS05515
old locus tag: BRE_2004
pseudo: true
so part of: sequence
location: <3049..3572
location: region:3049-3572:1
so has part: feature:3049-3572:1:exon
subclass of: SO_0000010

position:3049:1
position: 3049
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

position:3572:1
position: 3572
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3049-3572:1:exon

BRE_RS05515
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 412418
locus tag: BRE_RS05515
old locus tag: BRE_2004
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012539720.1
note: frameshifted; incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: hypothetical protein
SIO_010081: BRE_RS05515
subclass of: SO_0000673
so part of: BRE_RS05515
location: <3049..3572
location: region:3049-3572:1
so has part: feature:3049-3572:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3049-3572:1:exon

BRE_RS05525
type: Gene
subclass of: SO_0000704
RO_0002162: 412418
locus tag: BRE_RS05525
old locus tag: BRE_2005
so part of: sequence
location: 4198..4662
location: region:4198-4662:1
so has part: feature:4198-4662:1:exon
subclass of: SO_0000010

position:4198:1
position: 4198
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4662:1
position: 4662
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4198-4662:1:exon

BRE_RS05525
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 412418
locus tag: BRE_RS05525
old locus tag: BRE_2005
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MKNAFIFLYISCILFNSCWHNPNAINNYPKDIQMREESVKKQITKDQSLFLDLVRDSLGTKKADVYGKILALDISKIKPVLDNMQSNLKKCGGNYNDNLVKLKKKFKESLKDITTNDIDTSDNDISSNTSSDNSNGNNIFSDNIFEGLCDALKN
SIO_010081: BRE_RS05525
subclass of: SO_0000673
so part of: BRE_RS05525
location: 4198..4662
location: region:4198-4662:1
so has part: feature:4198-4662:1:exon

WP_156768718.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4198-4662:1:exon

BRE_RS05530
type: Gene
subclass of: SO_0000704
RO_0002162: 412418
locus tag: BRE_RS05530
old locus tag: BRE_2006
so part of: sequence
location: 4952..5638
location: region:4952-5638:1
so has part: feature:4952-5638:1:exon
subclass of: SO_0000010

position:4952:1
position: 4952
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5638:1
position: 5638
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4952-5638:1:exon

BRE_RS05530
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 412418
locus tag: BRE_RS05530
old locus tag: BRE_2006
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012539700.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: plasmid maintenance protein
translation: MTKQKLELNTQPLKQYHTRYYKILSILKYFQRNAINYNQTKILNTLNFFLKKDDIKITTLRTLRQDLCFLCKNGIIEKTLIRLGKSNGSYIRYTVNKYSNNNLNRLLESKESIVEHDANAIYKFTKKTQKKYLQNKKVKIYKPKNATKNVSHIINNKKEIKDKEKNDIIFKISKVTKGKTMKYLDKIEENKNKKRYEESIFRVKNWLKQLKLAEFANRGYYNQSNKEE
SIO_010081: BRE_RS05530
subclass of: SO_0000673
so part of: BRE_RS05530
location: 4952..5638
location: region:4952-5638:1
so has part: feature:4952-5638:1:exon

WP_012539720.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4952-5638:1:exon

BRE_RS05535
type: Gene
subclass of: SO_0000704
RO_0002162: 412418
locus tag: BRE_RS05535
old locus tag: BRE_2007
so part of: sequence
location: 5642..6217
location: region:5642-6217:1
so has part: feature:5642-6217:1:exon
subclass of: SO_0000010

position:5642:1
position: 5642
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6217:1
position: 6217
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5642-6217:1:exon

BRE_RS05535
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 412418
locus tag: BRE_RS05535
old locus tag: BRE_2007
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012539728.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF226 domain-containing protein
translation: MQCPLERLRSKRIKIEPTNKNKKNDTFIKIEKINNRTMYHTKITKDFYVFGENKKQKNKFLICMRDIFKSERINAFNLFSIKGDDRFLGMYYGYKDLEKPIIINYKNDAVGTNQSIKMFKVCYVEFRFKHGSVFCYIKCMKNLLKKEKKNQKYCEILFSHLIDLEKKVYEFYDKTLPKGGIVVKWIEKNQK
SIO_010081: BRE_RS05535
subclass of: SO_0000673
so part of: BRE_RS05535
location: 5642..6217
location: region:5642-6217:1
so has part: feature:5642-6217:1:exon

WP_012539721.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:5642-6217:1:exon

BRE_RS05540
type: Gene
subclass of: SO_0000704
RO_0002162: 412418
locus tag: BRE_RS05540
old locus tag: BRE_2008
so part of: sequence
location: 6193..6945
location: region:6193-6945:1
so has part: feature:6193-6945:1:exon
subclass of: SO_0000010

position:6193:1
position: 6193
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6945:1
position: 6945
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6193-6945:1:exon

BRE_RS05540
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 412418
locus tag: BRE_RS05540
old locus tag: BRE_2008
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014683349.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ParA family protein
translation: MDRKKPEIITIASIKGGVGKSTSALFFCNILSSKEQRVLLIDSDPQASVTSYFLLQLQDQNVDIEKYNLYEILKQRKYIENCIFSMNEFIDIIPSSLELSSFNSESIPLQDNLLEKRLLSIKLKYDYIIIDTNPSLGHLLNNALIIADYLVIPINSDLWAVESIDLITDAIKKVYREDLEPNFLVTGALERQSIDKEIISELEIRYREKLIGIIPKRDDIKKTIFYRKDFCLDNDYYQAYKKALNNLLKK
SIO_010081: BRE_RS05540
subclass of: SO_0000673
so part of: BRE_RS05540
location: 6193..6945
location: region:6193-6945:1
so has part: feature:6193-6945:1:exon

WP_012539722.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:6193-6945:1:exon

BRE_RS05545
type: Gene
subclass of: SO_0000704
RO_0002162: 412418
locus tag: BRE_RS05545
old locus tag: BRE_2009
so part of: sequence
location: 6985..7557
location: region:6985-7557:1
so has part: feature:6985-7557:1:exon
subclass of: SO_0000010

position:6985:1
position: 6985
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7557:1
position: 7557
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6985-7557:1:exon

BRE_RS05545
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 412418
locus tag: BRE_RS05545
old locus tag: BRE_2009
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014683350.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: chromosome replication/partitioning protein
translation: MGIKNKNKMIIGRRVKVNEDNLFVKLPEDSRKEEYLRLKDRLKSLVVDDIYNKIETAKVLSLINEKKLYIFDGYKSFYGFLADFKIAKSQAYKYIKIVSGMAQGIIDYDFIINNGIENTIKKLGIKNIVKKSKHNLTKQLCFQFKSQDSYDFYKRDTKFMCFVLDELFINNKEYLENLHKKYEHKLQKGI
SIO_010081: BRE_RS05545
subclass of: SO_0000673
so part of: BRE_RS05545
location: 6985..7557
location: region:6985-7557:1
so has part: feature:6985-7557:1:exon

WP_012539723.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:6985-7557:1:exon

BRE_RS05550
type: Gene
subclass of: SO_0000704
RO_0002162: 412418
locus tag: BRE_RS05550
old locus tag: BRE_2010
so part of: sequence
location: 8261..8842
location: region:8261-8842:1
so has part: feature:8261-8842:1:exon
subclass of: SO_0000010

position:8261:1
position: 8261
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8842:1
position: 8842
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8261-8842:1:exon

BRE_RS05550
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 412418
locus tag: BRE_RS05550
old locus tag: BRE_2010
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015633354.1
GO component: GO:0009279 - cell outer membrane [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: Vsp/OspC family lipoprotein
translation: MGCNSGGGIKEGEEEKARKGDGSVIDLKVVGEKIKSAVEFAGKVKEVHTLVKSVDELAKAIGKKVEGAGNLSDDGGQNGSLISAAYSIISSVSTKLDALEQQAEVSTELKAKITIVKTASKKFTDTVKGASADLGKKDASDENAKKALLKSDAVGDKGAKDLVALNTAIDELLKNAEVAVASAIKELTISSNN
SIO_010081: BRE_RS05550
subclass of: SO_0000673
so part of: BRE_RS05550
location: 8261..8842
location: region:8261-8842:1
so has part: feature:8261-8842:1:exon

WP_012539724.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:8261-8842:1:exon

BRE_RS05555
type: Gene
subclass of: SO_0000704
RO_0002162: 412418
locus tag: BRE_RS05555
old locus tag: BRE_2011
pseudo: true
so part of: sequence
location: 9068..>9392
location: region:9068-9392:1
so has part: feature:9068-9392:1:exon
subclass of: SO_0000010

position:9068:1
position: 9068
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9392:1
position: 9392
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9068-9392:1:exon

BRE_RS05555
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 412418
locus tag: BRE_RS05555
old locus tag: BRE_2011
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012539765.1
GO component: GO:0016020 - membrane [Evidence IEA]
note: frameshifted; internal stop; incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: variable large family protein
SIO_010081: BRE_RS05555
subclass of: SO_0000673
so part of: BRE_RS05555
location: 9068..>9392
location: region:9068-9392:1
so has part: feature:9068-9392:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:9068-9392:1:exon

BRE_RS05560
type: Gene
subclass of: SO_0000704
RO_0002162: 412418
locus tag: BRE_RS05560
old locus tag: BRE_2012
pseudo: true
so part of: sequence
location: complement(<9521..10130)
location: region:9521-10130:-1
so has part: feature:9521-10130:-1:exon
subclass of: SO_0000010

position:9521:-1
position: 9521
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

position:10130:-1
position: 10130
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9521-10130:-1:exon

BRE_RS05560
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 412418
locus tag: BRE_RS05560
old locus tag: BRE_2012
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012539553.1
GO component: GO:0016020 - membrane [Evidence IEA]
note: frameshifted; incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: variable large family protein
SIO_010081: BRE_RS05560
subclass of: SO_0000673
so part of: BRE_RS05560
location: complement(<9521..10130)
location: region:9521-10130:-1
so has part: feature:9521-10130:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:9521-10130:-1:exon

BRE_RS05565
type: Gene
subclass of: SO_0000704
RO_0002162: 412418
gene: bdr
locus tag: BRE_RS05565
old locus tag: BRE_2013
so part of: sequence
location: complement(10520..10972)
location: region:10520-10972:-1
so has part: feature:10520-10972:-1:exon
subclass of: SO_0000010

position:10520:-1
position: 10520
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:10972:-1
position: 10972
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:10520-10972:-1:exon

BRE_RS05565
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 412418
gene: bdr
locus tag: BRE_RS05565
old locus tag: BRE_2013
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014683343.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: Bdr family repetitive protein
translation: MEYMQMEPVITRQMVLNELVKAGIKRDIADDLSYRYYKNELTTKDLQYLKENFDIKLKHLEEKIFDTKEELINRMDSKFTELDNKINTVESNLKSEISLVRKDMELNKIELDTKIDKFASEVKGTFKLHAWMFGTIITLTIGILLTLIFK
SIO_010081: BRE_RS05565
subclass of: SO_0000673
so part of: BRE_RS05565
location: complement(10520..10972)
location: region:10520-10972:-1
so has part: feature:10520-10972:-1:exon

WP_041177921.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:10520-10972:-1:exon

BRE_RS06820
type: Gene
subclass of: SO_0000704
RO_0002162: 412418
locus tag: BRE_RS06820
so part of: sequence
location: complement(11014..11310)
location: region:11014-11310:-1
so has part: feature:11014-11310:-1:exon
subclass of: SO_0000010

position:11014:-1
position: 11014
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:11310:-1
position: 11310
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11014-11310:-1:exon

BRE_RS06820
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 412418
locus tag: BRE_RS06820
inference: COORDINATES: protein motif:HMM:NF036421.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MTREYVRLRDNMENYFRIAPIRPKTNKHARIVSLLTPFTYNKMHLLDYSSRFVFNDIYSYNGYVKVHDDALDALLAAYLIMSLNYCDRSRHFTKFTFI
SIO_010081: BRE_RS06820
subclass of: SO_0000673
so part of: BRE_RS06820
location: complement(11014..11310)
location: region:11014-11310:-1
so has part: feature:11014-11310:-1:exon

WP_269516827.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:11014-11310:-1:exon

BRE_RS06705
type: Gene
subclass of: SO_0000704
RO_0002162: 412418
locus tag: BRE_RS06705
so part of: sequence
location: complement(11307..11867)
location: region:11307-11867:-1
so has part: feature:11307-11867:-1:exon
subclass of: SO_0000010

position:11307:-1
position: 11307
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:11867:-1
position: 11867
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11307-11867:-1:exon

BRE_RS06705
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 412418
locus tag: BRE_RS06705
inference: COORDINATES: protein motif:HMM:NF015211.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: terminase family protein
translation: MYVNEATTLYKETLKEALKRLRMNPEFIIFDTNPDHPENYFKIDYIDNNTIYSTYNFTTYDNETISKEFIKTQEEIYKDLPTYKAGVLRGEWVANNDAIFSNINIIEDYEFKSPISYLDPAYSNGGDNTALCVLEKVSDKYYAFIFQDQKPAVDPCIMNTIKVIMGNLMLILFILKIEMILKELGL
SIO_010081: BRE_RS06705
subclass of: SO_0000673
so part of: BRE_RS06705
location: complement(11307..11867)
location: region:11307-11867:-1
so has part: feature:11307-11867:-1:exon

WP_269516829.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:11307-11867:-1:exon

BRE_RS06710
type: Gene
subclass of: SO_0000704
RO_0002162: 412418
locus tag: BRE_RS06710
so part of: sequence
location: complement(11825..12367)
location: region:11825-12367:-1
so has part: feature:11825-12367:-1:exon
subclass of: SO_0000010

position:11825:-1
position: 11825
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:12367:-1
position: 12367
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11825-12367:-1:exon

BRE_RS06710
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 412418
locus tag: BRE_RS06710
inference: COORDINATES: protein motif:HMM:NF015211.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: terminase family protein
translation: MDIYSSSIFKYMQREYKREFGIDIAFFIKPKPVVVDFERFENKLLTKKQRKVLNDIEKNNQKKIILSGGIASGKTFLACYLFLKTLLKNRHLYRKGTNNFILGNLQKSLEINVIEQFENLANILKIPFVPKYSNTSYFGINSLRVNLYGGDKIRDFERFRGSNSAVIFMLMKQQLFIKRH
SIO_010081: BRE_RS06710
subclass of: SO_0000673
so part of: BRE_RS06710
location: complement(11825..12367)
location: region:11825-12367:-1
so has part: feature:11825-12367:-1:exon

WP_232212782.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:11825-12367:-1:exon

BRE_RS05575
type: Gene
subclass of: SO_0000704
RO_0002162: 412418
locus tag: BRE_RS05575
old locus tag: BRE_2015
so part of: sequence
location: complement(12372..12911)
location: region:12372-12911:-1
so has part: feature:12372-12911:-1:exon
subclass of: SO_0000010

position:12372:-1
position: 12372
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:12911:-1
position: 12911
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:12372-12911:-1:exon

BRE_RS05575
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 412418
locus tag: BRE_RS05575
old locus tag: BRE_2015
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012539229.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF603 domain-containing protein
translation: MNKVKRAYEDYAMYFEEGRLNDAEIAKELCVTRANVSKMRQKWESSKDNPTEFYSDNKVTICKTTLNSILDRVLETNAKARELKSKFSITKSQLGLKFMKAFNNYLELELEDCIEEINLLEREIKMIQNKGNSRELQDKKIKLKDLKREKEDKTMKLCYETMKKLKIADLDESRFKFGG
SIO_010081: BRE_RS05575
subclass of: SO_0000673
so part of: BRE_RS05575
location: complement(12372..12911)
location: region:12372-12911:-1
so has part: feature:12372-12911:-1:exon

WP_012539725.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:12372-12911:-1:exon

BRE_RS06715
type: Gene
subclass of: SO_0000704
RO_0002162: 412418
locus tag: BRE_RS06715
so part of: sequence
location: 13162..13422
location: region:13162-13422:1
so has part: feature:13162-13422:1:exon
subclass of: SO_0000010

position:13162:1
position: 13162
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:13422:1
position: 13422
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:13162-13422:1:exon

BRE_RS06715
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 412418
locus tag: BRE_RS06715
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MYKYLKQILIYSLILIYSCTDKVKEPTNTQQANYNKNFNTIINGFNKYIEKAREDLNKHEKDKRQLQNYDDYKIAIDKYDKFISWI
SIO_010081: BRE_RS06715
subclass of: SO_0000673
so part of: BRE_RS06715
location: 13162..13422
location: region:13162-13422:1
so has part: feature:13162-13422:1:exon

WP_041178259.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:13162-13422:1:exon

BRE_RS06720
type: Gene
subclass of: SO_0000704
RO_0002162: 412418
locus tag: BRE_RS06720
pseudo: true
so part of: sequence
location: <13450..13728
location: region:13450-13728:1
so has part: feature:13450-13728:1:exon
subclass of: SO_0000010

position:13450:1
position: 13450
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

position:13728:1
position: 13728
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:13450-13728:1:exon

BRE_RS06720
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 412418
locus tag: BRE_RS06720
inference: COORDINATES: protein motif:HMM:NF015275.2
note: incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: Mlp family lipoprotein
SIO_010081: BRE_RS06720
subclass of: SO_0000673
so part of: BRE_RS06720
location: <13450..13728
location: region:13450-13728:1
so has part: feature:13450-13728:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:13450-13728:1:exon

BRE_RS05890
type: Gene
subclass of: SO_0000704
RO_0002162: 412418
locus tag: BRE_RS05890
old locus tag: BRE_2017
so part of: sequence
location: 14305..14541
location: region:14305-14541:1
so has part: feature:14305-14541:1:exon
subclass of: SO_0000010

position:14305:1
position: 14305
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:14541:1
position: 14541
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:14305-14541:1:exon

BRE_RS05890
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 412418
locus tag: BRE_RS05890
old locus tag: BRE_2017
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MFYSLRVNVAKKRSNICIREVVISENEYKSIMRVHHDYFISKGKDTKRTYLFQKSKNKFKDNRININKISKQFKDFLL
SIO_010081: BRE_RS05890
subclass of: SO_0000673
so part of: BRE_RS05890
location: 14305..14541
location: region:14305-14541:1
so has part: feature:14305-14541:1:exon

WP_049752040.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:14305-14541:1:exon

BRE_RS06725
type: Gene
subclass of: SO_0000704
RO_0002162: 412418
locus tag: BRE_RS06725
pseudo: true
so part of: sequence
location: complement(14522..>14800)
location: region:14522-14800:-1
so has part: feature:14522-14800:-1:exon
subclass of: SO_0000010

position:14522:-1
position: 14522
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:14800:-1
position: 14800
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:14522-14800:-1:exon

BRE_RS06725
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 412418
locus tag: BRE_RS06725
inference: COORDINATES: protein motif:HMM:NF016302.2
note: incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: ERF family protein
SIO_010081: BRE_RS06725
subclass of: SO_0000673
so part of: BRE_RS06725
location: complement(14522..>14800)
location: region:14522-14800:-1
so has part: feature:14522-14800:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:14522-14800:-1:exon

BRE_RS06730
type: Gene
subclass of: SO_0000704
RO_0002162: 412418
locus tag: BRE_RS06730
so part of: sequence
location: complement(14822..15145)
location: region:14822-15145:-1
so has part: feature:14822-15145:-1:exon
subclass of: SO_0000010

position:14822:-1
position: 14822
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:15145:-1
position: 15145
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:14822-15145:-1:exon

BRE_RS06730
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 412418
locus tag: BRE_RS06730
inference: COORDINATES: protein motif:HMM:NF016302.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ERF family protein
translation: MNAKNITKTNIQETTKINNKNTTMNQKRIDFLNNLKTLRMGLNCVDKNLDGYGYKYQDFNEIVRKVKNFIKEYDLNIDFVQYPTTKSIDCNLIDVVTITFYSPLSGY
SIO_010081: BRE_RS06730
subclass of: SO_0000673
so part of: BRE_RS06730
location: complement(14822..15145)
location: region:14822-15145:-1
so has part: feature:14822-15145:-1:exon

WP_232212784.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:14822-15145:-1:exon

BRE_RS05595
type: Gene
subclass of: SO_0000704
RO_0002162: 412418
locus tag: BRE_RS05595
old locus tag: BRE_2019
so part of: sequence
location: complement(15588..16121)
location: region:15588-16121:-1
so has part: feature:15588-16121:-1:exon
subclass of: SO_0000010

position:15588:-1
position: 15588
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:16121:-1
position: 16121
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:15588-16121:-1:exon

BRE_RS05595
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 412418
locus tag: BRE_RS05595
old locus tag: BRE_2019
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012539656.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: chromosome replication/partitioning protein
translation: MNIQLNDRVLEKFDSKEQLRIYYNKLKENFVNSFKKEIVYKIECMKILKEIKDNGYYKMDGFKTFDAFTKNFKIARSQIYNYLKLAVAMEDGVVSEDYLLENGINDTLLLIKTNGSETIKKSRQNPIKPLRFQLRSQGSYDFYKENSKFTSFVLDELFENRKEFLEELQNEFEKLKG
SIO_010081: BRE_RS05595
subclass of: SO_0000673
so part of: BRE_RS05595
location: complement(15588..16121)
location: region:15588-16121:-1
so has part: feature:15588-16121:-1:exon

WP_012539726.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:15588-16121:-1:exon

BRE_RS05600
type: Gene
subclass of: SO_0000704
RO_0002162: 412418
locus tag: BRE_RS05600
old locus tag: BRE_2020
so part of: sequence
location: complement(16163..16906)
location: region:16163-16906:-1
so has part: feature:16163-16906:-1:exon
subclass of: SO_0000010

position:16163:-1
position: 16163
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:16906:-1
position: 16906
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:16163-16906:-1:exon

BRE_RS05600
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 412418
locus tag: BRE_RS05600
old locus tag: BRE_2020
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012539655.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ParA family protein
translation: MDRKKSKIITIASIKGGVGKSTTSLIFSTLLAQKFKVLLIDMDTQASSTSYFIKDIESQKFDVVQFNIYEVIKNNININESIVNIKKGLDLIPSYLTLYQFNAENILFKEMRLKENLKLLNEKYDYIIIDTNPSLDFTLVNALVVSSYVIVPMTAEKWAVESLQLLEHFIVKAGFKIPIYLIVTRFKRNKTHKYLLNIIEAKDNFLGAIKEREDLNRKIASNTDFDINKDYIVEYQNIFNKFLERQV
SIO_010081: BRE_RS05600
subclass of: SO_0000673
so part of: BRE_RS05600
location: complement(16163..16906)
location: region:16163-16906:-1
so has part: feature:16163-16906:-1:exon

WP_012539727.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:16163-16906:-1:exon

BRE_RS05605
type: Gene
subclass of: SO_0000704
RO_0002162: 412418
locus tag: BRE_RS05605
old locus tag: BRE_2021
so part of: sequence
location: complement(16882..17442)
location: region:16882-17442:-1
so has part: feature:16882-17442:-1:exon
subclass of: SO_0000010

position:16882:-1
position: 16882
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:17442:-1
position: 17442
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:16882-17442:-1:exon

BRE_RS05605
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 412418
locus tag: BRE_RS05605
old locus tag: BRE_2021
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012539728.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF226 domain-containing protein
translation: MDSVLERLREKKIEIKEKGDKSIFIKIEENNSRKVYHTKIVMDFYTFGVNKTQKNKFFIAFRNLLSMKKIYEFNLFSLKEDDKFLGIFYGYRKPMQKIVTRYEENGVMKSSTFSKIYYIEFRFKKGSVFCYIKGISRLIKKEKKETQYSQFLLELIVNLEKKVYEFYGKKLLEGGIITKWIEKNQK
SIO_010081: BRE_RS05605
subclass of: SO_0000673
so part of: BRE_RS05605
location: complement(16882..17442)
location: region:16882-17442:-1
so has part: feature:16882-17442:-1:exon

WP_012539728.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:16882-17442:-1:exon

BRE_RS05610
type: Gene
subclass of: SO_0000704
RO_0002162: 412418
locus tag: BRE_RS05610
old locus tag: BRE_2022
so part of: sequence
location: complement(17452..18558)
location: region:17452-18558:-1
so has part: feature:17452-18558:-1:exon
subclass of: SO_0000010

position:17452:-1
position: 17452
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:18558:-1
position: 18558
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:17452-18558:-1:exon

BRE_RS05610
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 412418
locus tag: BRE_RS05610
old locus tag: BRE_2022
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012539836.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: plasmid maintenance protein
translation: MGSTKRPINNKYQHKLIVLISTLNYINSHFKQYNQNKILYYFNNNLNNNGQKKATLKTLQSYLYKLEKEFHVTSNYYRHLGENCGTEIHYKLRFSKKVCHYKINRHFRNKKEDRFQQRANLYHQQTCTNNESLKKNGSVEKWECINNNSNNNKKNKELEKIEKEKAQLEKYIKKCEFKDDKYLSVLNLETTKEIKIEKLIKLKKEENKRERERNKSNRLIGRQQELEKALAETKEVLKKEGYNEKQLETEIQKAYKKYKHKPHFIVESSKYGDLGQIIKRIKKTVECKKKGKKEDHKQIRNNIFSILLDQLKNKVEVKILAPILRNYLSNQIDLKYSQVFNNHYYYEILEMVEGKEHLRIEEYEKIVD
SIO_010081: BRE_RS05610
subclass of: SO_0000673
so part of: BRE_RS05610
location: complement(17452..18558)
location: region:17452-18558:-1
so has part: feature:17452-18558:-1:exon

WP_041178260.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:17452-18558:-1:exon

BRE_RS06735
type: Gene
subclass of: SO_0000704
RO_0002162: 412418
locus tag: BRE_RS06735
so part of: sequence
location: 18533..18805
location: region:18533-18805:1
so has part: feature:18533-18805:1:exon
subclass of: SO_0000010

position:18533:1
position: 18533
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:18805:1
position: 18805
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:18533-18805:1:exon

BRE_RS06735
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 412418
locus tag: BRE_RS06735
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MIGLFVLPILNSLITAIHDSSISNKKQTFIDIEDLTNHIRLFLQDSKYYLDLSKLSYKDEFVSFINIVNLNIGAEERELLERHLVDIQSK
SIO_010081: BRE_RS06735
subclass of: SO_0000673
so part of: BRE_RS06735
location: 18533..18805
location: region:18533-18805:1
so has part: feature:18533-18805:1:exon

WP_041178261.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:18533-18805:1:exon

BRE_RS06740
type: Gene
subclass of: SO_0000704
RO_0002162: 412418
locus tag: BRE_RS06740
so part of: sequence
location: 18905..19093
location: region:18905-19093:1
so has part: feature:18905-19093:1:exon
subclass of: SO_0000010

position:18905:1
position: 18905
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:19093:1
position: 19093
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:18905-19093:1:exon

BRE_RS06740
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 412418
locus tag: BRE_RS06740
inference: COORDINATES: protein motif:HMM:NF015096.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MDFELADNIVYRLGKNIFALNSSKRAIKDRFKLITDHYDYYDISSSRKFYISNTVSSISYAI
SIO_010081: BRE_RS06740
subclass of: SO_0000673
so part of: BRE_RS06740
location: 18905..19093
location: region:18905-19093:1
so has part: feature:18905-19093:1:exon

WP_041178262.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:18905-19093:1:exon

BRE_RS06140
type: Gene
subclass of: SO_0000704
RO_0002162: 412418
locus tag: BRE_RS06140
so part of: sequence
location: 19617..19772
location: region:19617-19772:1
so has part: feature:19617-19772:1:exon
subclass of: SO_0000010

position:19617:1
position: 19617
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:19772:1
position: 19772
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:19617-19772:1:exon

BRE_RS06140
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 412418
locus tag: BRE_RS06140
inference: COORDINATES: protein motif:HMM:NF015173.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF261 family protein
translation: MKRDVRVEDKDYKCLKDEFEISEVKIKNTVGSYFMATNNTEVLYDPLFFKR
SIO_010081: BRE_RS06140
subclass of: SO_0000673
so part of: BRE_RS06140
location: 19617..19772
location: region:19617-19772:1
so has part: feature:19617-19772:1:exon

WP_232212787.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:19617-19772:1:exon

BRE_RS05625
type: Gene
subclass of: SO_0000704
RO_0002162: 412418
locus tag: BRE_RS05625
old locus tag: BRE_2026
so part of: sequence
location: complement(20104..20856)
location: region:20104-20856:-1
so has part: feature:20104-20856:-1:exon
subclass of: SO_0000010

position:20104:-1
position: 20104
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:20856:-1
position: 20856
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:20104-20856:-1:exon

BRE_RS05625
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 412418
locus tag: BRE_RS05625
old locus tag: BRE_2026
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012539227.1
GO function: GO:0003677 - DNA binding [Evidence IEA]
GO process: GO:0015074 - DNA integration [Evidence IEA]; GO:0006310 - DNA recombination [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: tyrosine-type recombinase/integrase
translation: MKEYEILKAKIKELKKQNSILLKETRQYKKELLQTKSNTKSKSIPIRFYLNDKTIRLVKKSIDKLKQIDPISGWFVHILSITGCRGVEIQNIRLDDIVRETNNNSDVFYNLRVNVAKKRSNICIREVVISKSEFESIEEIHKLNFKNKGQDSRRTYLFQKSKHRFKDNRINISKISKQFKELLTKSRFKHPKSLHICRNIFIATLKSKGYNSFKIKELMKYASTSEIDNVYGLSKASKLKAYHDIKDGFK
SIO_010081: BRE_RS05625
subclass of: SO_0000673
so part of: BRE_RS05625
location: complement(20104..20856)
location: region:20104-20856:-1
so has part: feature:20104-20856:-1:exon

WP_012539730.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:20104-20856:-1:exon

BRE_RS05630
type: Gene
subclass of: SO_0000704
RO_0002162: 412418
locus tag: BRE_RS05630
old locus tag: BRE_2027
so part of: sequence
location: complement(21288..21707)
location: region:21288-21707:-1
so has part: feature:21288-21707:-1:exon
subclass of: SO_0000010

position:21288:-1
position: 21288
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:21707:-1
position: 21707
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:21288-21707:-1:exon

BRE_RS05630
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 412418
locus tag: BRE_RS05630
old locus tag: BRE_2027
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014540923.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: Mlp family lipoprotein
translation: MKITNFTLILLLLMSSCKQDNNTNKGIKSRNKRDLEQQVEAQKTPEEALREKLNDNQRKGLDFLKDALSNSESEFNKFLNADESKIKDALDHIQSELAKCTRDNAAEQKETFKQVVKGALQAGLDNFKSSADSTCGNNQ
SIO_010081: BRE_RS05630
subclass of: SO_0000673
so part of: BRE_RS05630
location: complement(21288..21707)
location: region:21288-21707:-1
so has part: feature:21288-21707:-1:exon

WP_012539731.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:21288-21707:-1:exon

BRE_RS05635
type: Gene
subclass of: SO_0000704
RO_0002162: 412418
locus tag: BRE_RS05635
old locus tag: BRE_2028
so part of: sequence
location: complement(21870..22400)
location: region:21870-22400:-1
so has part: feature:21870-22400:-1:exon
subclass of: SO_0000010

position:21870:-1
position: 21870
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:22400:-1
position: 22400
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:21870-22400:-1:exon

BRE_RS05635
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 412418
locus tag: BRE_RS05635
old locus tag: BRE_2028
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012539612.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MSTEEKNKFYLLIYAFDILKQDKLLSKQDTLPSHQNVPTTEVTSLLNKYDRFRTWILDDAHVQEQKKLANSFHDAYTFLINKKNELASNQDIKQYIEGAFIYYSNDKYKGNHKYDPSLYGKIDSNDPNYVDLFFDNLITTVIGKYDTNEEIFQKLKEELQNKESDTYKRLLALWTN
SIO_010081: BRE_RS05635
subclass of: SO_0000673
so part of: BRE_RS05635
location: complement(21870..22400)
location: region:21870-22400:-1
so has part: feature:21870-22400:-1:exon

WP_041178263.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:21870-22400:-1:exon

BRE_RS06745
type: Gene
subclass of: SO_0000704
RO_0002162: 412418
locus tag: BRE_RS06745
so part of: sequence
location: 22869..23024
location: region:22869-23024:1
so has part: feature:22869-23024:1:exon
subclass of: SO_0000010

position:22869:1
position: 22869
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:23024:1
position: 23024
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:22869-23024:1:exon

BRE_RS06745
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 412418
locus tag: BRE_RS06745
inference: COORDINATES: protein motif:HMM:NF016524.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MLIRASEYSAQSSSVKSQLHMARNRLGLEFIASFIVYLDLELKSYNKEIKV
SIO_010081: BRE_RS06745
subclass of: SO_0000673
so part of: BRE_RS06745
location: 22869..23024
location: region:22869-23024:1
so has part: feature:22869-23024:1:exon

WP_232212785.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:22869-23024:1:exon

BRE_RS06750
type: Gene
subclass of: SO_0000704
RO_0002162: 412418
locus tag: BRE_RS06750
so part of: sequence
location: 23568..24185
location: region:23568-24185:1
so has part: feature:23568-24185:1:exon
subclass of: SO_0000010

position:23568:1
position: 23568
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:24185:1
position: 24185
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:23568-24185:1:exon

BRE_RS06750
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 412418
locus tag: BRE_RS06750
inference: COORDINATES: protein motif:HMM:NF036421.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: phage portal protein
translation: MPTYKSSVLLGEWVANNDAIFSNINIIKDYEFKSPIAYLDPAYSSGGDNTSLCILEKVSDKYYEFIFQDQKPAVDPYVMNTIKVIMGNLNVNTLYIEDRDDIKGAGALTCEYVSLRDNMENYFRIAPTRPKTNKHARIVSLLTPFTYNKMHLLDYSSRSVFRDIYSYNGDGKVHDDVLDALSAAYLIMSLNYRDRSRHFTKFTFI
SIO_010081: BRE_RS06750
subclass of: SO_0000673
so part of: BRE_RS06750
location: 23568..24185
location: region:23568-24185:1
so has part: feature:23568-24185:1:exon

WP_083764334.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:23568-24185:1:exon

BRE_RS06755
type: Gene
subclass of: SO_0000704
RO_0002162: 412418
gene: bdr
locus tag: BRE_RS06755
old locus tag: BRE_2030
so part of: sequence
location: 24227..24754
location: region:24227-24754:1
so has part: feature:24227-24754:1:exon
subclass of: SO_0000010

position:24227:1
position: 24227
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:24754:1
position: 24754
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:24227-24754:1:exon

BRE_RS06755
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 412418
gene: bdr
locus tag: BRE_RS06755
old locus tag: BRE_2030
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012539611.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: Bdr family repetitive protein
translation: MEYIQMEPVITRQMVFNELVKAGINREIADDLSYRYYKNELTIKDLQYLESNFNLKLEILERGLKAEIRELDTKIDTVENNLNIKIDIKFTELDNKIDTVENNLKSDIKDLDTKIDAKFTELDNKIDIVRKDIELNKMELNSKLKLHAWMFGTIITINVGIFIALISMLYALFIK
SIO_010081: BRE_RS06755
subclass of: SO_0000673
so part of: BRE_RS06755
location: 24227..24754
location: region:24227-24754:1
so has part: feature:24227-24754:1:exon

WP_041178264.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:24227-24754:1:exon

BRE_RS05660
type: Gene
subclass of: SO_0000704
RO_0002162: 412418
locus tag: BRE_RS05660
old locus tag: BRE_2031
pseudo: true
so part of: sequence
location: 25217..26264
location: region:25217-26264:1
so has part: feature:25217-26264:1:exon
subclass of: SO_0000010

position:25217:1
position: 25217
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:26264:1
position: 26264
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:25217-26264:1:exon

BRE_RS05660
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 412418
locus tag: BRE_RS05660
old locus tag: BRE_2031
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014683270.1
GO component: GO:0016020 - membrane [Evidence IEA]
note: frameshifted; internal stop; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: variable large family protein
SIO_010081: BRE_RS05660
subclass of: SO_0000673
so part of: BRE_RS05660
location: 25217..26264
location: region:25217-26264:1
so has part: feature:25217-26264:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:25217-26264:1:exon

BRE_RS05895
type: Gene
subclass of: SO_0000704
RO_0002162: 412418
locus tag: BRE_RS05895
old locus tag: BRE_2032
pseudo: true
so part of: sequence
location: 26600..>27214
location: region:26600-27214:1
so has part: feature:26600-27214:1:exon
subclass of: SO_0000010

position:26600:1
position: 26600
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:27214:1
position: 27214
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:26600-27214:1:exon

BRE_RS05895
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 412418
locus tag: BRE_RS05895
old locus tag: BRE_2032
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012539593.1
GO component: GO:0016020 - membrane [Evidence IEA]
note: frameshifted; incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: variable large family protein
SIO_010081: BRE_RS05895
subclass of: SO_0000673
so part of: BRE_RS05895
location: 26600..>27214
location: region:26600-27214:1
so has part: feature:26600-27214:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:26600-27214:1:exon

BRE_RS05670
type: Gene
subclass of: SO_0000704
RO_0002162: 412418
locus tag: BRE_RS05670
old locus tag: BRE_2033
pseudo: true
so part of: sequence
location: complement(<27341..27665)
location: region:27341-27665:-1
so has part: feature:27341-27665:-1:exon
subclass of: SO_0000010

position:27341:-1
position: 27341
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

position:27665:-1
position: 27665
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:27341-27665:-1:exon

BRE_RS05670
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 412418
locus tag: BRE_RS05670
old locus tag: BRE_2033
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012539765.1
GO component: GO:0016020 - membrane [Evidence IEA]
note: frameshifted; internal stop; incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: variable large family protein
SIO_010081: BRE_RS05670
subclass of: SO_0000673
so part of: BRE_RS05670
location: complement(<27341..27665)
location: region:27341-27665:-1
so has part: feature:27341-27665:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:27341-27665:-1:exon

BRE_RS05675
type: Gene
subclass of: SO_0000704
RO_0002162: 412418
locus tag: BRE_RS05675
old locus tag: BRE_2034
pseudo: true
so part of: sequence
location: complement(27895..28515)
location: region:27895-28515:-1
so has part: feature:27895-28515:-1:exon
subclass of: SO_0000010

position:27895:-1
position: 27895
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:28515:-1
position: 28515
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:27895-28515:-1:exon

BRE_RS05675
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 412418
locus tag: BRE_RS05675
old locus tag: BRE_2034
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014696694.1
GO component: GO:0009279 - cell outer membrane [Evidence IEA]
note: internal stop; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: Vsp/OspC family lipoprotein
SIO_010081: BRE_RS05675
subclass of: SO_0000673
so part of: BRE_RS05675
location: complement(27895..28515)
location: region:27895-28515:-1
so has part: feature:27895-28515:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:27895-28515:-1:exon

BRE_RS05680
type: Gene
subclass of: SO_0000704
RO_0002162: 412418
locus tag: BRE_RS05680
old locus tag: BRE_2036
so part of: sequence
location: complement(28788..29780)
location: region:28788-29780:-1
so has part: feature:28788-29780:-1:exon
subclass of: SO_0000010

position:28788:-1
position: 28788
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:29780:-1
position: 29780
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:28788-29780:-1:exon

BRE_RS05680
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 412418
locus tag: BRE_RS05680
old locus tag: BRE_2036
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012539765.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: variable large family protein
translation: MMMMVVMGCNSGGVKDPEKVFLSEMVNLGKGFLEVFVSFGDMITGTLGIKAETKKSEIGGYFSKIAETMKEVREKLEKILEENGKYEKVREKVGEFIGKISKIEEGAKEASKGANGDIIGNAKKGEDAVAASKDSVVSLVKGIKAIVEIVLGEKEGNAGNNIITEDKKDIGKLFGKKDGDRAQEAEAAKVSTSIGAVSGADILKAIAKSKENPVTDSANGIEKATDAAEIAVVPSVDDKKEIKEDTAKKDAIIAAGIALRGMAKEGKFAAKKDEDKSAHAVNGAVSSAVNKVLSTLVIAIRNTVDKGLKEINEVLGEIKQGEGVEAKVSK
SIO_010081: BRE_RS05680
subclass of: SO_0000673
so part of: BRE_RS05680
location: complement(28788..29780)
location: region:28788-29780:-1
so has part: feature:28788-29780:-1:exon

WP_012539695.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:28788-29780:-1:exon

BRE_RS06330
type: Gene
subclass of: SO_0000704
RO_0002162: 412418
locus tag: BRE_RS06330
so part of: sequence
location: complement(29752..29907)
location: region:29752-29907:-1
so has part: feature:29752-29907:-1:exon
subclass of: SO_0000010

position:29752:-1
position: 29752
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:29907:-1
position: 29907
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:29752-29907:-1:exon

BRE_RS06330
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 412418
locus tag: BRE_RS06330
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MLLIIDSCIDVVCCILLYFKDKLEEKKEVMQIENRIKRVVGVNDDDGGDGM
SIO_010081: BRE_RS06330
subclass of: SO_0000673
so part of: BRE_RS06330
location: complement(29752..29907)
location: region:29752-29907:-1
so has part: feature:29752-29907:-1:exon

WP_156768713.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:29752-29907:-1:exon

BRE_RS06335
type: Gene
subclass of: SO_0000704
RO_0002162: 412418
locus tag: BRE_RS06335
so part of: sequence
location: 29970..30140
location: region:29970-30140:1
so has part: feature:29970-30140:1:exon
subclass of: SO_0000010

position:29970:1
position: 29970
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:30140:1
position: 30140
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:29970-30140:1:exon

BRE_RS06335
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 412418
locus tag: BRE_RS06335
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MAEQKLKIPVGLLFWYLLIHLNLNGNTIKNDTSHSDGKLKNLDVKDLPFSTTKPSK
SIO_010081: BRE_RS06335
subclass of: SO_0000673
so part of: BRE_RS06335
location: 29970..30140
location: region:29970-30140:1
so has part: feature:29970-30140:1:exon

WP_156768714.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:29970-30140:1:exon

BRE_RS05685
type: Gene
subclass of: SO_0000704
RO_0002162: 412418
locus tag: BRE_RS05685
old locus tag: BRE_2037
so part of: sequence
location: complement(30387..31406)
location: region:30387-31406:-1
so has part: feature:30387-31406:-1:exon
subclass of: SO_0000010

position:30387:-1
position: 30387
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:31406:-1
position: 31406
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:30387-31406:-1:exon

BRE_RS05685
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 412418
locus tag: BRE_RS05685
old locus tag: BRE_2037
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012539551.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: variable large family protein
translation: MMVMMGCNSGVLEAEQGKNKFLQSLVNVSNEFLNVFTSFWEMVGSVLGLNVNSKKSDVGKYFRTVQETVQGIKDGLNKIVNEMKEEKNPNAEATESAVKTLVESKLDKIIGGAKEASEAIGDASDPIGNVSDQNAGAVGIEVDKLVKGLKSIVDIVLKEGKNDAGDDKKASDGSTSRTSGNAGDGEAGKLFASANAGTAENAKKSAADAAKAVGAVTCADILQSMIEDNGEVVKLASSNAAVAAVNANKKDGVIAGGIALRAMAKDGKFAGSSDAASVDAKKTVKGAAVSALIKALDTLTVAIRKTVDLGLKNVKEAMKINANATSVLPDKDVSDAKNQ
SIO_010081: BRE_RS05685
subclass of: SO_0000673
so part of: BRE_RS05685
location: complement(30387..31406)
location: region:30387-31406:-1
so has part: feature:30387-31406:-1:exon

WP_232212786.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:30387-31406:-1:exon

BRE_RS05690
type: Gene
subclass of: SO_0000704
RO_0002162: 412418
gene: bdr
locus tag: BRE_RS05690
old locus tag: BRE_2038
so part of: sequence
location: 31680..32270
location: region:31680-32270:1
so has part: feature:31680-32270:1:exon
subclass of: SO_0000010

position:31680:1
position: 31680
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:32270:1
position: 32270
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:31680-32270:1:exon

BRE_RS05690
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 412418
gene: bdr
locus tag: BRE_RS05690
old locus tag: BRE_2038
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014696762.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: Bdr family repetitive protein
translation: MAHPQPIITQQMVLKELIKAGINRDIAADLSYRYYKNELTYKDLEYLENNFNSKIEKIESILKSEITSAKLEVNNKIDKVKVELDNKIDNKFNELDNQINKVEDRLKSEITSTKIELNNKIDKVEDKLKSEIISTKIELNNKIDKIKIELDNKIDNKFNEIKNTGKLHNWMFGTIITLNIGIFLTLFSIIYSLLNK
SIO_010081: BRE_RS05690
subclass of: SO_0000673
so part of: BRE_RS05690
location: 31680..32270
location: region:31680-32270:1
so has part: feature:31680-32270:1:exon

WP_012539697.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:31680-32270:1:exon

BRE_RS05695
type: Gene
subclass of: SO_0000704
RO_0002162: 412418
locus tag: BRE_RS05695
so part of: sequence
location: complement(32488..32691)
location: region:32488-32691:-1
so has part: feature:32488-32691:-1:exon
subclass of: SO_0000010

position:32488:-1
position: 32488
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:32691:-1
position: 32691
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:32488-32691:-1:exon

BRE_RS05695
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 412418
locus tag: BRE_RS05695
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MLFIIIIIIIIIIIIDFLILRDKRIKGNDNAKKLKKTKDEDEGGNDFLGVFTFVGDMVDSVLKCIKF
SIO_010081: BRE_RS05695
subclass of: SO_0000673
so part of: BRE_RS05695
location: complement(32488..32691)
location: region:32488-32691:-1
so has part: feature:32488-32691:-1:exon

WP_156768715.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:32488-32691:-1:exon

BRE_RS05700
type: Gene
subclass of: SO_0000704
RO_0002162: 412418
locus tag: BRE_RS05700
old locus tag: BRE_2039
pseudo: true
so part of: sequence
location: complement(33122..33664)
location: region:33122-33664:-1
so has part: feature:33122-33664:-1:exon
subclass of: SO_0000010

position:33122:-1
position: 33122
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:33664:-1
position: 33664
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:33122-33664:-1:exon

BRE_RS05700
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 412418
locus tag: BRE_RS05700
old locus tag: BRE_2039
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014023172.1
note: internal stop; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: chromosome replication/partitioning protein
SIO_010081: BRE_RS05700
subclass of: SO_0000673
so part of: BRE_RS05700
location: complement(33122..33664)
location: region:33122-33664:-1
so has part: feature:33122-33664:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:33122-33664:-1:exon

BRE_RS05705
type: Gene
subclass of: SO_0000704
RO_0002162: 412418
locus tag: BRE_RS05705
old locus tag: BRE_2040
so part of: sequence
location: complement(33740..34501)
location: region:33740-34501:-1
so has part: feature:33740-34501:-1:exon
subclass of: SO_0000010

position:33740:-1
position: 33740
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:34501:-1
position: 34501
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:33740-34501:-1:exon

BRE_RS05705
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 412418
locus tag: BRE_RS05705
old locus tag: BRE_2040
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014023173.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ParA family protein
translation: MDKKEPEIISIANIKGGVGKSVLTIIFSYILKDMGKKILAIDFDPQNSLTSYFFKYVKSLSKNNIYALLKERPNFNLDKYLTKIHEFIYLIPSHPNLHLFNKENTSYKELFLKHRLKNVLPDYNFDYVIIDTPPNLDSLLDNALNITDKLIIPIQVERFSVESLSILMKYIDKISMYVGKDIDISIVENQFMKNRNTFMNIENSIKDKYGKYIKGKIHFSNKIKVFANDLKEPNFKEAYYQECLESLRNILGI
SIO_010081: BRE_RS05705
subclass of: SO_0000673
so part of: BRE_RS05705
location: complement(33740..34501)
location: region:33740-34501:-1
so has part: feature:33740-34501:-1:exon

WP_012539698.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:33740-34501:-1:exon

BRE_RS05710
type: Gene
subclass of: SO_0000704
RO_0002162: 412418
locus tag: BRE_RS05710
old locus tag: BRE_2041
so part of: sequence
location: complement(34477..35052)
location: region:34477-35052:-1
so has part: feature:34477-35052:-1:exon
subclass of: SO_0000010

position:34477:-1
position: 34477
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:35052:-1
position: 35052
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:34477-35052:-1:exon

BRE_RS05710
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 412418
locus tag: BRE_RS05710
old locus tag: BRE_2041
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014023174.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF226 domain-containing protein
translation: MNCSLRRLKTKMIEIRLKDNKNDVFNEIEKIDKRTLYHTKIFNDFFAFGISKKEENKFFISLRNLFNKGKRSRFHLFSIKENIDDKFLGMFYGFKRLRKPIYFKYKNNNTKDIETVPMYKIYYIEFRFKRGSIFCYIRAIHSLTKKEKFNKNYAQNLLKRIINLEYEVYEFYNETPIAGGIITKWIKRNQK
SIO_010081: BRE_RS05710
subclass of: SO_0000673
so part of: BRE_RS05710
location: complement(34477..35052)
location: region:34477-35052:-1
so has part: feature:34477-35052:-1:exon

WP_012539699.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:34477-35052:-1:exon

BRE_RS05715
type: Gene
subclass of: SO_0000704
RO_0002162: 412418
locus tag: BRE_RS05715
old locus tag: BRE_2042
so part of: sequence
location: complement(35125..35808)
location: region:35125-35808:-1
so has part: feature:35125-35808:-1:exon
subclass of: SO_0000010

position:35125:-1
position: 35125
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:35808:-1
position: 35808
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:35125-35808:-1:exon

BRE_RS05715
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 412418
locus tag: BRE_RS05715
old locus tag: BRE_2042
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014486293.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: plasmid maintenance protein
translation: MKNTSHEVKIHTQPLKKYHNRYYKILSILKYFQKNLLRYNQTIILNALNRFLAKDELKIITLRTLRKDLALLCNKGIIKKTLLRLGEGNGSYIRYAVNKYSTNNLKRLLDDKQTIIEHDANEIYEFTKKTQQKYYLKNKRLNIHKHKNATKNVSHNITNNKEIKNKKNKKEKMKKIEKQTIDTNYMIKNVAKWKTMRYLDKIEENANKKRYEDSMIKTKEWLKNLKN
SIO_010081: BRE_RS05715
subclass of: SO_0000673
so part of: BRE_RS05715
location: complement(35125..35808)
location: region:35125-35808:-1
so has part: feature:35125-35808:-1:exon

WP_012539700.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:35125-35808:-1:exon

BRE_RS05720
type: Gene
subclass of: SO_0000704
RO_0002162: 412418
locus tag: BRE_RS05720
so part of: sequence
location: complement(36388..36735)
location: region:36388-36735:-1
so has part: feature:36388-36735:-1:exon
subclass of: SO_0000010

position:36388:-1
position: 36388
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:36735:-1
position: 36735
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:36388-36735:-1:exon

BRE_RS05720
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 412418
locus tag: BRE_RS05720
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MYIGFTSDALIASAIPSSCFTIAFRQGTKDFCSFEKINLYGSIKIETTSAIIKTIKSFLRIFTDLLTEVSLQLNPSYNQDLIYVSLFHNLILIKHLLLHDHVKVVLNKKIEIENS
SIO_010081: BRE_RS05720
subclass of: SO_0000673
so part of: BRE_RS05720
location: complement(36388..36735)
location: region:36388-36735:-1
so has part: feature:36388-36735:-1:exon

WP_041178252.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:36388-36735:-1:exon

BRE_RS05725
type: Gene
subclass of: SO_0000704
RO_0002162: 412418
locus tag: BRE_RS05725
old locus tag: BRE_2043
pseudo: true
so part of: sequence
location: 36954..37990
location: region:36954-37990:1
so has part: feature:36954-37990:1:exon
subclass of: SO_0000010

position:36954:1
position: 36954
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:37990:1
position: 37990
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:36954-37990:1:exon

BRE_RS05725
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 412418
locus tag: BRE_RS05725
old locus tag: BRE_2043
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014687078.1
note: frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: variable large family protein
SIO_010081: BRE_RS05725
subclass of: SO_0000673
so part of: BRE_RS05725
location: 36954..37990
location: region:36954-37990:1
so has part: feature:36954-37990:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:36954-37990:1:exon

BRE_RS06825
type: Gene
subclass of: SO_0000704
RO_0002162: 412418
locus tag: BRE_RS06825
so part of: sequence
location: 38486..38608
location: region:38486-38608:1
so has part: feature:38486-38608:1:exon
subclass of: SO_0000010

position:38486:1
position: 38486
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:38608:1
position: 38608
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:38486-38608:1:exon

BRE_RS06825
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 412418
locus tag: BRE_RS06825
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MRIGKNRREKRNRESKERGDKDGENSKRNNNGDDGGSDGM
SIO_010081: BRE_RS06825
subclass of: SO_0000673
so part of: BRE_RS06825
location: 38486..38608
location: region:38486-38608:1
so has part: feature:38486-38608:1:exon

WP_269516825.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:38486-38608:1:exon

BRE_RS05730
type: Gene
subclass of: SO_0000704
RO_0002162: 412418
locus tag: BRE_RS05730
old locus tag: BRE_2044
so part of: sequence
location: 38550..39194
location: region:38550-39194:1
so has part: feature:38550-39194:1:exon
subclass of: SO_0000010

position:38550:1
position: 38550
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:39194:1
position: 39194
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:38550-39194:1:exon

BRE_RS05730
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 412418
locus tag: BRE_RS05730
old locus tag: BRE_2044
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012539787.1
GO component: GO:0009279 - cell outer membrane [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: Vsp/OspC family lipoprotein
translation: MGRIVKGIIMGMMVVVMGCNSGGVSGEGTGGDGKVRKGDGSVIDLKVVGEKIKSAVEFAGKVKEVHVLVKSVDELAKAIGKKIKDSDQELDALDGKNGSLMAGVFQIILTVKGGLTKLETDSSSVTEKIKTKITDAKTKSVNFLKKLQEKNTDLGKEDVSNADAEKAIDYVKQKDGDKGAKELGELNKAVDELLVSSNKIVSDAIAELVVKPIT
SIO_010081: BRE_RS05730
subclass of: SO_0000673
so part of: BRE_RS05730
location: 38550..39194
location: region:38550-39194:1
so has part: feature:38550-39194:1:exon

WP_012539702.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:38550-39194:1:exon

BRE_RS05735
type: Gene
subclass of: SO_0000704
RO_0002162: 412418
locus tag: BRE_RS05735
old locus tag: BRE_2045
so part of: sequence
location: 39440..40534
location: region:39440-40534:1
so has part: feature:39440-40534:1:exon
subclass of: SO_0000010

position:39440:1
position: 39440
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:40534:1
position: 40534
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:39440-40534:1:exon

BRE_RS05735
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 412418
locus tag: BRE_RS05735
old locus tag: BRE_2045
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012539703.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: variable large family protein
translation: MKEKKGKGNIEESISEYREKGREKRSKRGLKGIMVLVMVMMGCNSGGVSGGVKDPEKVFLSEMVNLGKGFLDVFVSFGDMITGTLGIKADTKKSDIGKYFTDIEKTMISVKEKLQTEVAKNGNYVKIKEVVDQFITGTLDKIAEGAKKASSGAAGGAVLGSSVKNEDAAPGEVASVNALIEGIKTIVAVVLKNEGNADANKTTDDDKKDIGKLFSKASDNGSEAEAAKANASIGAVSGVDILQAIAKSDVVSAAGKDIDQAKDVAEIATAKNDSGTKETKQKDAVISGGIALRSMAKGGKFATKNEDKAVPAINGVAASAVGKTLSALIIAIRNTVDSELKKINEVLATVKQEDKSSEATASVQ
SIO_010081: BRE_RS05735
subclass of: SO_0000673
so part of: BRE_RS05735
location: 39440..40534
location: region:39440-40534:1
so has part: feature:39440-40534:1:exon

WP_012539703.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:39440-40534:1:exon

BRE_RS05740
type: Gene
subclass of: SO_0000704
RO_0002162: 412418
locus tag: BRE_RS05740
old locus tag: BRE_2046
pseudo: true
so part of: sequence
location: 40844..41463
location: region:40844-41463:1
so has part: feature:40844-41463:1:exon
subclass of: SO_0000010

position:40844:1
position: 40844
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:41463:1
position: 41463
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:40844-41463:1:exon

BRE_RS05740
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 412418
locus tag: BRE_RS05740
old locus tag: BRE_2046
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012537768.1
GO component: GO:0009279 - cell outer membrane [Evidence IEA]
note: frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: Vsp/OspC family lipoprotein
SIO_010081: BRE_RS05740
subclass of: SO_0000673
so part of: BRE_RS05740
location: 40844..41463
location: region:40844-41463:1
so has part: feature:40844-41463:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:40844-41463:1:exon

BRE_RS06760
type: Gene
subclass of: SO_0000704
RO_0002162: 412418
locus tag: BRE_RS06760
pseudo: true
so part of: sequence
location: <41669..>41785
location: region:41669-41785:1
so has part: feature:41669-41785:1:exon
subclass of: SO_0000010

position:41669:1
position: 41669
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

position:41785:1
position: 41785
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:41669-41785:1:exon

BRE_RS06760
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 412418
locus tag: BRE_RS06760
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012539497.1
GO component: GO:0016020 - membrane [Evidence IEA]
note: internal stop; incomplete; partial in the middle of a contig; missing N-terminus and C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: variable large family protein
SIO_010081: BRE_RS06760
subclass of: SO_0000673
so part of: BRE_RS06760
location: <41669..>41785
location: region:41669-41785:1
so has part: feature:41669-41785:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:41669-41785:1:exon

BRE_RS05745
type: Gene
subclass of: SO_0000704
RO_0002162: 412418
locus tag: BRE_RS05745
old locus tag: BRE_2047
pseudo: true
so part of: sequence
location: <41900..42817
location: region:41900-42817:1
so has part: feature:41900-42817:1:exon
subclass of: SO_0000010

position:41900:1
position: 41900
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

position:42817:1
position: 42817
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:41900-42817:1:exon

BRE_RS05745
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 412418
locus tag: BRE_RS05745
old locus tag: BRE_2047
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012539509.1
note: incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: variable large family protein
SIO_010081: BRE_RS05745
subclass of: SO_0000673
so part of: BRE_RS05745
location: <41900..42817
location: region:41900-42817:1
so has part: feature:41900-42817:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:41900-42817:1:exon

BRE_RS05750
type: Gene
subclass of: SO_0000704
RO_0002162: 412418
locus tag: BRE_RS05750
old locus tag: BRE_2048
so part of: sequence
location: 43089..44087
location: region:43089-44087:1
so has part: feature:43089-44087:1:exon
subclass of: SO_0000010

position:43089:1
position: 43089
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:44087:1
position: 44087
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:43089-44087:1:exon

BRE_RS05750
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 412418
locus tag: BRE_RS05750
old locus tag: BRE_2048
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014696701.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: variable large family protein
translation: MMMVMMGCNSGGVSGGVRDPEKVFLSEMVNLGKGFLDVFVSFGDMITGTLGIKADTKKSEIGGYFTKIAETMKGVREKLGKILEENGKYEKVKEKVEEFIGEIGKIEAGAQEAAKGATGEAIGNAASAGHGATPANRESVVSLVKGIKIIVDVVLKGKGNAEATKTGDDKKDIGNLFADDNGKGDAKEENIAKASASIGAVIGADILQAIAKSKEDPKDYATDGIEKATDAAEIAIAKAVNAKKEIKEESAKKDAVIAAGIALRGMAKDGKFAANQSAKDANAVNGAVASAVNKVLSTLTIAIRNTVDLGLKEINKVLGEIKEGEGFEVKTN
SIO_010081: BRE_RS05750
subclass of: SO_0000673
so part of: BRE_RS05750
location: 43089..44087
location: region:43089-44087:1
so has part: feature:43089-44087:1:exon

WP_049752038.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:43089-44087:1:exon

BRE_RS05755
type: Gene
subclass of: SO_0000704
RO_0002162: 412418
locus tag: BRE_RS05755
old locus tag: BRE_2049
pseudo: true
so part of: sequence
location: 44342..44946
location: region:44342-44946:1
so has part: feature:44342-44946:1:exon
subclass of: SO_0000010

position:44342:1
position: 44342
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:44946:1
position: 44946
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:44342-44946:1:exon

BRE_RS05755
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 412418
locus tag: BRE_RS05755
old locus tag: BRE_2049
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012539714.1
GO component: GO:0009279 - cell outer membrane [Evidence IEA]
note: frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: Vsp/OspC family lipoprotein
SIO_010081: BRE_RS05755
subclass of: SO_0000673
so part of: BRE_RS05755
location: 44342..44946
location: region:44342-44946:1
so has part: feature:44342-44946:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:44342-44946:1:exon

BRE_RS05760
type: Gene
subclass of: SO_0000704
RO_0002162: 412418
locus tag: BRE_RS05760
old locus tag: BRE_2050
pseudo: true
so part of: sequence
location: <45521..46272
location: region:45521-46272:1
so has part: feature:45521-46272:1:exon
subclass of: SO_0000010

position:45521:1
position: 45521
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

position:46272:1
position: 46272
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:45521-46272:1:exon

BRE_RS05760
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 412418
locus tag: BRE_RS05760
old locus tag: BRE_2050
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012539493.1
GO component: GO:0016020 - membrane [Evidence IEA]
note: frameshifted; incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: variable large family protein
SIO_010081: BRE_RS05760
subclass of: SO_0000673
so part of: BRE_RS05760
location: <45521..46272
location: region:45521-46272:1
so has part: feature:45521-46272:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:45521-46272:1:exon

BRE_RS05765
type: Gene
subclass of: SO_0000704
RO_0002162: 412418
locus tag: BRE_RS05765
old locus tag: BRE_2051
pseudo: true
so part of: sequence
location: <46457..47302
location: region:46457-47302:1
so has part: feature:46457-47302:1:exon
subclass of: SO_0000010

position:46457:1
position: 46457
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

position:47302:1
position: 47302
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:46457-47302:1:exon

BRE_RS05765
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 412418
locus tag: BRE_RS05765
old locus tag: BRE_2051
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014683299.1
GO component: GO:0016020 - membrane [Evidence IEA]
note: internal stop; incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: variable large family protein
SIO_010081: BRE_RS05765
subclass of: SO_0000673
so part of: BRE_RS05765
location: <46457..47302
location: region:46457-47302:1
so has part: feature:46457-47302:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:46457-47302:1:exon

BRE_RS05770
type: Gene
subclass of: SO_0000704
RO_0002162: 412418
locus tag: BRE_RS05770
old locus tag: BRE_2052
pseudo: true
so part of: sequence
location: 47485..48491
location: region:47485-48491:1
so has part: feature:47485-48491:1:exon
subclass of: SO_0000010

position:47485:1
position: 47485
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:48491:1
position: 48491
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:47485-48491:1:exon

BRE_RS05770
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 412418
locus tag: BRE_RS05770
old locus tag: BRE_2052
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012539515.1
note: frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: variable large family protein
SIO_010081: BRE_RS05770
subclass of: SO_0000673
so part of: BRE_RS05770
location: 47485..48491
location: region:47485-48491:1
so has part: feature:47485-48491:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:47485-48491:1:exon

BRE_RS06160
type: Gene
subclass of: SO_0000704
RO_0002162: 412418
locus tag: BRE_RS06160
pseudo: true
so part of: sequence
location: <48718..48996
location: region:48718-48996:1
so has part: feature:48718-48996:1:exon
subclass of: SO_0000010

position:48718:1
position: 48718
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

position:48996:1
position: 48996
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:48718-48996:1:exon

BRE_RS06160
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 412418
locus tag: BRE_RS06160
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014687021.1
GO component: GO:0016020 - membrane [Evidence IEA]
note: frameshifted; internal stop; incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: variable large family protein
SIO_010081: BRE_RS06160
subclass of: SO_0000673
so part of: BRE_RS06160
location: <48718..48996
location: region:48718-48996:1
so has part: feature:48718-48996:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:48718-48996:1:exon

BRE_RS05780
type: Gene
subclass of: SO_0000704
RO_0002162: 412418
locus tag: BRE_RS05780
old locus tag: BRE_2054
pseudo: true
so part of: sequence
location: 49205..50163
location: region:49205-50163:1
so has part: feature:49205-50163:1:exon
subclass of: SO_0000010

position:49205:1
position: 49205
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:50163:1
position: 50163
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:49205-50163:1:exon

BRE_RS05780
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 412418
locus tag: BRE_RS05780
old locus tag: BRE_2054
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012539585.1
note: frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: variable large family protein
SIO_010081: BRE_RS05780
subclass of: SO_0000673
so part of: BRE_RS05780
location: 49205..50163
location: region:49205-50163:1
so has part: feature:49205-50163:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:49205-50163:1:exon

BRE_RS05785
type: Gene
subclass of: SO_0000704
RO_0002162: 412418
locus tag: BRE_RS05785
old locus tag: BRE_2055
pseudo: true
so part of: sequence
location: 50314..51407
location: region:50314-51407:1
so has part: feature:50314-51407:1:exon
subclass of: SO_0000010

position:50314:1
position: 50314
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:51407:1
position: 51407
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:50314-51407:1:exon

BRE_RS05785
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 412418
locus tag: BRE_RS05785
old locus tag: BRE_2055
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014683354.1
note: frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: variable large family protein
SIO_010081: BRE_RS05785
subclass of: SO_0000673
so part of: BRE_RS05785
location: 50314..51407
location: region:50314-51407:1
so has part: feature:50314-51407:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:50314-51407:1:exon